BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040255
         (869 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255564976|ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537309|gb|EEF38940.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 944

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 361/956 (37%), Positives = 523/956 (54%), Gaps = 122/956 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTRDNFTSHL+  L  K IK F+DD+L RG+ IS +L+  IE S +++II
Sbjct: 16  YDVFVSFRGEDTRDNFTSHLYAALHQKQIKAFVDDKLSRGEEISAALVKVIEESMVSVII 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA S W                      FY VDPS V +Q   FG  F    K F 
Sbjct: 76  FSENYAFSPWCLDELVKILECKKTVGQIVLPVFYHVDPSDVAEQKGGFGAAFIEHEKCFK 135

Query: 101 E---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGV 156
           E   K+++W+ ALTEAA++SG+ S+VIR ESKLI+EIA D+LK+L+    S + KGLVG+
Sbjct: 136 ERIDKLQKWRAALTEAANISGWSSSVIRSESKLIQEIAEDILKKLNHMSSSTDSKGLVGI 195

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              I++IE LLC+    V  L +WG+GG  K T A  VFN+IS  F+   F  NV E  E
Sbjct: 196 NSRIDKIELLLCVELADVRFLGLWGMGGAGKTTTAEVVFNRISTQFDSCCFLANVNEESE 255

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLN--RLARKKVRIVFDDVTS------------- 261
             G+  LQ++L S+L    N+   E   +  RL  +KV IV DDV +             
Sbjct: 256 RYGLLKLQRQLFSKLLGQDNVNYAEGIFDKSRLKHRKVLIVLDDVNNLRQLENLAGEHNW 315

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+I+T+RDK VLKN   +  Y++++L + +A +LF   AF  +   A +++L+ +
Sbjct: 316 FGPGSRIILTSRDKDVLKN-KTDAIYKIEDLDHHEALQLFSLNAFRQECPKADYMKLSKR 374

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I YA+G PL LKVLG +L  R+ + WESA+ KLE   + EI+ VLK+SYD LDD +K++
Sbjct: 375 VINYAKGNPLGLKVLGSFLYQRNIKEWESALHKLERSTNKEIQNVLKVSYDGLDDEEKDI 434

Query: 379 FLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGRE 425
           FLD+ACF  GE RD V  I +              SKSL+ +     + +H+LL+ MG  
Sbjct: 435 FLDVACFFNGEDRDFVTRILNGCGFSADIAISVLVSKSLLTIS-NNTLAIHNLLQQMGWG 493

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ES   PG+R+RL   +D+  VL KNTGTEAIEGI LDM+K +R+++++  AF +M 
Sbjct: 494 IVRQESTKEPGRRSRLCTSEDVVHVLSKNTGTEAIEGIYLDMSK-SRKVYLSPKAFERMH 552

Query: 486 KLRFLRFYGDKNKCMV-------SHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            LR L+F+   +   +         LE +P  ++  L W   PLK+L  N CAE LV L 
Sbjct: 553 NLRLLKFHHSFSPIAMYSKVYLPEGLESLP-DKLSCLHWNGYPLKSLPFNFCAEYLVELS 611

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTI 593
           MP + V+ LW+  Q L       K   +  + D + L RLPD  E  NLEY+ ++G  ++
Sbjct: 612 MPHSHVKFLWEGDQCL-------KKLNSINLSDSQHLIRLPDFSEALNLEYINLEGCISL 664

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
            ++P S+G L+ +  L L +   L  IP S+  L  L  L +S C  L    + P N+  
Sbjct: 665 AQVPSSIGYLTKLDILNLKDCKELRSIP-SLIDLQSLRKLNLSGCSNLNHCQDFPRNIEE 723

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKS 713
           L   + T++E+LPA +  +S + + ++ N  +LD N    I  D    H   +       
Sbjct: 724 L-CLDGTAIEELPASIEDLSELTFWSMENCKRLDQNSCCLIAADA---HKTIQRTATAAG 779

Query: 714 MY--------FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLK 765
           ++        FPG EIP W  ++  GSS T+K  P      ++ + FA C VV F  F+ 
Sbjct: 780 IHSLPSVSFGFPGTEIPDWLLYKETGSSITVKLHPNWHRNPSRFLGFAVCCVVKFTHFID 839

Query: 766 YFRHKSGEDDWDGNVYAVC-CDWKRKSEG-HLYSWFLGKIS-------YVESDHVFLGCN 816
                        N+Y +C C++K   +  H+ + FL  ++        V+S HV++G +
Sbjct: 840 I-----------NNIYVICECNFKTNHDDHHVVNCFLQGLNNGKDESDLVKSQHVYIGYD 888

Query: 817 SFG-------GEYFGP--NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSA 863
            FG       G Y G   +Y+E +F+ +        +   +V KCG+H +YAQD+ 
Sbjct: 889 -FGIYLRAVKGTYPGRLYHYEEVTFKFYAKKMVGHTVAWRKVDKCGVHLLYAQDAT 943


>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 311/829 (37%), Positives = 456/829 (55%), Gaps = 135/829 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG+DTRDNF SHL   L  K IKTFIDD+L RG+ I+ +LL TIE S I++II
Sbjct: 13  YDVFLSFRGKDTRDNFVSHLRDALCRKQIKTFIDDKLERGEEITGALLRTIEESRISVII 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YASS W                      FY VDPS V +Q+ SFG  F+ L + F 
Sbjct: 73  FSRNYASSPWCVDELVKILECKKAYGQIVLPVFYHVDPSDVDQQTGSFGNAFAELERNFK 132

Query: 101 EKMK---RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           +KM    RW+  LT AA++SG+DS V RPES L+E+I + +LK+L+    S  KGLVG++
Sbjct: 133 QKMDKVPRWRADLTSAANISGWDSQVTRPESSLVEQIVHHILKKLNYASSSDLKGLVGMD 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E+IE+ LC      C + IWG+GG  K TIAG +FNKI+R +EG YF  NVRE+E+ 
Sbjct: 193 SRMEQIEASLCTKLPEFCFVGIWGMGGTGKTTIAGEIFNKIAREYEGHYFLANVRESEKN 252

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVTS---------- 261
           GG+  ++ +L S+++++ N+     ++      +R+ RKK+ IVFDDV            
Sbjct: 253 GGLFRIRDELFSKITEEENLHIRTPRIGHPFIKDRICRKKILIVFDDVNDVDQIEMLLGG 312

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+T+RDKQVLK  +A+K + ++ L + +A  LF   AF  +    +++EL
Sbjct: 313 CESFGPGSRIILTSRDKQVLKK-YADKIFEVEGLNHREALHLFSLHAFKDNQPPYNYMEL 371

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + +AI YA+G PLALKVLG  L GR+ + WESA+ K+E +   ++  VL+ISY++LD  +
Sbjct: 372 SVRAINYAKGNPLALKVLGSSLFGRTTKEWESALNKVEKLTRQKVHSVLRISYEALDSEE 431

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFY----------RIRMHDLLRDMG 423
           K++FLDIACF  G   D V  I D    K+ I   +            ++ MHDLL++M 
Sbjct: 432 KSIFLDIACFFRGHRVDFVKRILDGCGFKTDIGFSVLIDRCLIKISDDKVEMHDLLQEMA 491

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            ++VRKES++  G ++RLW  KD+YQVL  N GT  +EGI LD++K+ REI ++S A  +
Sbjct: 492 HDVVRKESLDELGGQSRLWSPKDVYQVLTNNLGTGKVEGIFLDVSKI-REIELSSTALGR 550

Query: 484 MPKLRFLRFYGDKN--KCMVSHLEGVP--FAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           M KLR L+ Y  +   KC V    G+     E+R+L W   PL +L  N   + LV + +
Sbjct: 551 MYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNFRPQNLVEINL 610

Query: 538 PCTKVEQLW-----------------------------DDVQRLPSSLCT--FKTPITFE 566
            C+KV +LW                              +++RL    CT   K P + +
Sbjct: 611 SCSKVNRLWRGDQNLVNLKDVNLSNCEHITFLPDLSKARNLERLNLQFCTSLVKVPSSIQ 670

Query: 567 IID--------------------------------CKMLERLPDELENLEYLTVKGTTIR 594
            +D                                C  L++ P+    L YL +  T + 
Sbjct: 671 HLDRLVDLDLRGCERLVNLPSRINSSCLETLNLSGCANLKKCPETARKLTYLNLNETAVE 730

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP+S+G LS +  L L N   L  +PE++  L+ L  + IS C  +  LP+   N+  L
Sbjct: 731 ELPQSIGELSGLVALNLKNCKLLVNLPENMYLLTSLLLVDISGCSSISRLPDFSRNIRYL 790

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP---NELSEIVKDG 698
              N T++E+LP+ +  +  ++Y+NL  C+ +   P   N + E+  DG
Sbjct: 791 YL-NGTAIEELPSSIGDLRKLIYLNLSGCSSITEFPKVSNNIKELYLDG 838



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 55/347 (15%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKML------------ERLPDELENLEYLTVKGTTIREL 596
            + +LPS +   K     E+ +CK L            ER  D L+ L  L + G  I  +
Sbjct: 912  ITKLPSPIGNLKGLACLEVGNCKYLNDIECFVDLQLSERWVD-LDYLRKLNLDGCHISVV 970

Query: 597  PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
            P+SLG LS ++ L LS N N   IP SI  LS+L +L + +C+RL++LPELP  L  L A
Sbjct: 971  PDSLGCLSSLEVLDLSGN-NFSTIPLSINKLSELQYLGLRNCKRLESLPELPPRLSKLDA 1029

Query: 657  RNCTSLEKLPAGLSSMSSVLYVNLCNFL---KLDPNELSEIVKDGWMKHSLYEERGIKK- 712
             NC SL  L    SS S+V+  N+  F+    L    +++I+     K  LY +R  +  
Sbjct: 1030 DNCESLNYLG---SSSSTVVKGNIFEFIFTNCLSLCRINQILPYALKKFRLYTKRLHQLT 1086

Query: 713  -------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF-- 763
                   S + PG   P+W  HQS GS+ T +         +K + F+ CAV+ F +F  
Sbjct: 1087 DVLEGACSFFLPGGVSPQWLSHQSWGSTVTCQL--SSHWANSKFLGFSLCAVIAFHSFGH 1144

Query: 764  ---LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNS 817
               +K   H S E     ++Y            +L+ W+  K   ++S+H+ +G   C  
Sbjct: 1145 SLQVKCTYHFSNEHGDSHDLYC-----------YLHGWYDEK--RIDSEHILVGFDPCLV 1191

Query: 818  FGGEYFGPNYDEFSFRIH---CSFHFPPYLERGEVKKCGIHFVYAQD 861
               +Y    Y E S        + +  P L+  +V KCG+  +Y  +
Sbjct: 1192 AKEDYMFSEYSEVSVEFQLEDINGNLLP-LDLCQVHKCGVRLLYEDE 1237



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 23/152 (15%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP ++    + +  +I  C  + RLPD   N+ YL + GT I ELP S+G L  +  L L
Sbjct: 756 LPENMYLLTSLLLVDISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRKLIYLNL 815

Query: 612 SNNSN--------------------LERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           S  S+                    +  IP SI  L +L  L + +C++ + LP   C L
Sbjct: 816 SGCSSITEFPKVSNNIKELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILPSSICTL 875

Query: 652 GLLSARN---CTSLEKLPAGLSSMSSVLYVNL 680
             L   N   C      P  L  M  + Y+ L
Sbjct: 876 RKLERLNLSGCLQFRDFPEVLEPMVCLRYLYL 907



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 16/146 (10%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           ++ LPSS+   +  I   +  C  +   P    N++ L + GT IRE+P S+  L  +  
Sbjct: 797 IEELPSSIGDLRKLIYLNLSGCSSITEFPKVSNNIKELYLDGTAIREIPSSIDCLFELVE 856

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC--------T 660
           L L N    E +P SI  L KL  L +S C + +  PE      +L    C        T
Sbjct: 857 LHLRNCKQFEILPSSICTLRKLERLNLSGCLQFRDFPE------VLEPMVCLRYLYLEET 910

Query: 661 SLEKLPAGLSSMSSV--LYVNLCNFL 684
            + KLP+ + ++  +  L V  C +L
Sbjct: 911 RITKLPSPIGNLKGLACLEVGNCKYL 936



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 32/175 (18%)

Query: 702  HSLYEERGIKK---SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
            +   EE  + K   S  + G+  P+WF HQS GS+ T +         ++ + F+ CA++
Sbjct: 1281 YEFLEEPDVSKRVSSFRYHGDVTPEWFSHQSWGSTVTCQL--SSHWANSEFLGFSLCAII 1338

Query: 759  VFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE----GHLYSWFLGKIS--YVESDHVF 812
             F +F    + K              C +  ++E      LY +   +I    ++SDHV 
Sbjct: 1339 AFHSFKHSLQVK--------------CTYHFRNEHGDSHDLYCYLHEEIDERRIDSDHVL 1384

Query: 813  LGCNSFGGEYFGPNYDEFSFRIHCSFHFPPY------LERGEVKKCGIHFVYAQD 861
            +G +          + E+S  I   F           L+  +V++CG+H + A+D
Sbjct: 1385 VGFDPCLVAKEKDMFSEYS-EIAVEFQLEDMNGNLLPLDVCQVQECGVHLLDAED 1438


>gi|255561496|ref|XP_002521758.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538971|gb|EEF40568.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 876

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 341/944 (36%), Positives = 490/944 (51%), Gaps = 172/944 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTRDNFTSHL+  L+ K I TF+D ++ RG+ IS S+   I+ S +++II
Sbjct: 11  YDVFLSFRGEDTRDNFTSHLYSALNKKKIFTFMDKEIKRGEEISPSIAKAIKGSKLSVII 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE+YA S+W                      FYRVDP HVR Q  SF   F++  +   
Sbjct: 71  FSEKYAFSKWCLDELTKILECKKMNGQIVIPVFYRVDPVHVRNQRGSFACAFAKHEETLK 130

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           E+M++   W++AL EA  +SG++S V RPESKLIEEI  D+ K+L+ T  S + GLVG++
Sbjct: 131 ERMEKVESWRSALNEAGSISGWNSLVARPESKLIEEIVKDISKKLNQTSPSHSIGLVGID 190

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E+IES+LC+    V  + +WG+GGI K T+AGA+F++IS  +E SYF  NVRE  + 
Sbjct: 191 SRLEQIESMLCLDMSDVRIIGVWGMGGIGKTTLAGAIFDQISAQYESSYFLGNVREQLKR 250

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVTS---------- 261
             + +L++KL S++ ++ N+      L      +RL+RKK+ +V DDV S          
Sbjct: 251 CLLAELREKLFSKILEEKNLDTRTPNLGNTFLKDRLSRKKILVVLDDVDSTMQLQELLPG 310

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+T+RDKQVLKN   ++ Y+++ L   +A +LF   AF  +      +E
Sbjct: 311 QHDLFGPGSRIIVTSRDKQVLKNV-VDEIYKVEGLNQHEALQLFSLNAFKKNSPTNDRVE 369

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           ++ +   YA+G PLAL+VLGC L  +SKE WESA+ KL  +P+ EI++VL+ SYD LD  
Sbjct: 370 ISTRVADYAKGNPLALRVLGCALFDKSKEDWESALEKLRNVPNGEIQKVLRFSYDGLDRE 429

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDASKS--------LINLDL--FYR--IRMHDLLRDM 422
           ++N+FLDIACF  GE R+    I D   S        LI+  L   YR  + MHDLL++ 
Sbjct: 430 ERNIFLDIACFFRGEDRNYATKILDGCYSSVGFIISTLIDKSLVSVYRSKLEMHDLLQET 489

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G  IVR+E      KR+RLW+ KD+Y VL K  GT+AIEGISLD++   RE+H+   AF+
Sbjct: 490 GWSIVREEP--ELEKRSRLWNPKDVYYVLTKKKGTKAIEGISLDLS-TTREMHLECDAFA 546

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFA-------EVRHLEWPQCPLKTL--NICAEKLV 533
            M  LR L+FY   +     H   +P         E+R+L+W + P ++L    CAE LV
Sbjct: 547 GMDHLRILKFYTSNSSIGCKHKMHLPGCGLQSLSDELRYLQWHKFPSRSLPPKFCAENLV 606

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTI 593
            L +P + +EQLW  VQ                                LEY       +
Sbjct: 607 VLDLPHSNIEQLWKGVQ--------------------------------LEYC----KKL 630

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             LP  + +LS ++ + LS                        +C+ L+ LPELP +L +
Sbjct: 631 VSLPSCMHKLSQLRSIYLS------------------------YCKSLRELPELPKSLKV 666

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNLC--NFLKLDPNELSEIVKDGWMKHSL----YEE 707
           L A +C S+E      SS S   + NLC  N  KLD    SEI  +      L    Y E
Sbjct: 667 LEAYDCRSME----NFSSSSKCNFKNLCFTNCFKLDQKACSEINANAESTVQLLTTKYRE 722

Query: 708 RGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF--PAFLK 765
              +  + F G+EIP+ F  Q +G S +++     P+ +++    AFC V     P+   
Sbjct: 723 CQDQVRILFQGSEIPECFNDQKVGFSVSMQL----PSNWHQFEGIAFCIVFASEDPSIDC 778

Query: 766 YFRHKSGEDDWDGNVYA---VCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSF---- 818
                  E  +  NV     + C+W+          F+  +   ESD V L  + F    
Sbjct: 779 RISRFRCEGQFKTNVNEQEDITCNWE---------CFIDDLHLHESDQVLLWYDPFIIKA 829

Query: 819 ---GGEYFGPNYDEFSFRIHCSFHFPP-----YLERGEVKKCGI 854
              GG       D F+     SF F P       +  +VKKCG+
Sbjct: 830 LQGGGGGASQEEDLFNKYSTASFQFYPQRWKKLQKHCKVKKCGV 873


>gi|356550897|ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 970

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 307/787 (39%), Positives = 436/787 (55%), Gaps = 130/787 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFTSHL+  L  K I+T+ID +L +GD IS +L+  IE S ++++I
Sbjct: 20  YDVFLSFRGEDTRKNFTSHLYEALKQKKIETYIDYRLEKGDEISAALIKAIEDSHVSVVI 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS+W                      FY +DPSHVRKQ+ S+ + F++      
Sbjct: 80  FSENYASSKWCLGELGKIMECKKERGQIVIPVFYNIDPSHVRKQTGSYEQSFAK--HTGE 137

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            +  +WK ALTEAA+L+ +DS + R ES+ +++I  DVL++L   + +  K LVGVE + 
Sbjct: 138 PRCSKWKAALTEAANLAAWDSQIYRTESEFLKDIVKDVLRKLAPRYPNHRKELVGVEENY 197

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           E+IESLL IGS  V  L IWG+GGI K T+A A+++K+S  FEG  F  NVRE  +  G 
Sbjct: 198 EKIESLLKIGSSKVRILGIWGMGGIGKTTLASALYDKLSPEFEGCCFLANVREESDKHGF 257

Query: 221 KDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVTS------------ 261
           K L+ KL SEL ++ N+    S        L+RL RKKV IV DDV +            
Sbjct: 258 KALRNKLFSELLENENLCFDASSFLVSHFVLSRLGRKKVFIVLDDVDTSEQLENLIEDFD 317

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVI+TTR+KQ+      +K Y++KEL    + KLFC   F        + +L+ 
Sbjct: 318 FLGLGSRVIVTTRNKQIFSQ--VDKIYKVKELSIHHSLKLFCLSVFREKQPKHGYEDLSR 375

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
            AI Y +G+PLALKVLG  L  RSK+ WE  +RKL+  P++EI  VLK+SYD LD SQK 
Sbjct: 376 SAISYCKGIPLALKVLGASLRSRSKQAWECELRKLQKFPNMEIHNVLKLSYDGLDYSQKE 435

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACFL G+ RD V SI +A              K+LI +    +I MHDL+++MG 
Sbjct: 436 IFLDIACFLRGKQRDHVTSILEAFDFPAASGIEVLLDKALITISGGIQIEMHDLIQEMGW 495

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           +IV +E I  PG+R+RLW H++++ VLK N GTE +EG+ LD++K+  +++++    +KM
Sbjct: 496 KIVHQEHIKDPGRRSRLWKHEEVHDVLKYNKGTEVVEGVILDLSKLTEDLYLSFDFLAKM 555

Query: 485 PKLRFLRFYGDK-----NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
             +RFL+ +        N  + + L+ + + ++R+L W    L++L    CAE+LV L M
Sbjct: 556 TNVRFLKIHSWSKFTIFNVYLPNGLDSLSY-KLRYLHWDGFCLESLPSRFCAEQLVELCM 614

Query: 538 PCTKVEQLWDDVQRLPS---------------------------------SLCTF----K 560
            C+K+++LWD VQ L +                                 SLC      K
Sbjct: 615 HCSKLKKLWDGVQNLVNLKTIDLWGSRDLVEIPDLSKAEKLESVSLCYCESLCQLQVHSK 674

Query: 561 TPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPES-----------------LGRL 603
           +     +  C  L       E L  L +  T I  LP S                 L +L
Sbjct: 675 SLGVLNLYGCSSLREFLVTSEELTELNLAFTAICALPSSIWQKRKLRSLYLRGCHNLNKL 734

Query: 604 SWVKRL-------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           S   R        I +  SN++R+P +I +LS +T +++  C +L +LPELP  L  LSA
Sbjct: 735 SDEPRFCGSYKHSITTLASNVKRLPVNIENLSMMTMIWLDDCRKLVSLPELPLFLEKLSA 794

Query: 657 RNCTSLE 663
            NCTSL+
Sbjct: 795 CNCTSLD 801


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 327/816 (40%), Positives = 453/816 (55%), Gaps = 133/816 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTRDNFTSHL   LS KS+ TF+D+  L  G+ I+ ++   IE S IAI+
Sbjct: 16  YDVFLSFRGEDTRDNFTSHLFAALSRKSVITFMDNNDLHVGEEITPAISKAIEESKIAIV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSERYA SRW                      FY V PS V   + +F  +      +F
Sbjct: 76  IFSERYAFSRWCLNEIVRIIECKETCGQLVLPVFYHVGPSDVSVFAEAFPSY-----DQF 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            EK+++WKNAL++AA+LS FDS V RPESKL++EI    LK+L  ++ S   +G+VGV+ 
Sbjct: 131 -EKVQKWKNALSKAANLSAFDSRVTRPESKLVDEIVMYTLKQLKQSYSSDVVEGIVGVDS 189

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR-EAEET 217
            IE+I+ LL IGS  V  L IWG+GGI K T+A AVF +I+  FEGS F  NVR   E+ 
Sbjct: 190 RIEQIKELLSIGSVDVRFLGIWGMGGIGKTTLAEAVFYQIAYQFEGSCFLANVRGNFEKN 249

Query: 218 GGIKDLQKKLLSELSKDGNMR----NIESQL---NRLARKKVRIVFDDVTS--------- 261
           GG+  LQ++LLS+  +  + +    NI         L  ++V IV DD            
Sbjct: 250 GGLARLQEELLSKTLEKRDFKIDTPNIGYSFWVKQMLKHRRVLIVVDDANDSEQLDLLVG 309

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+T+RDKQVL     +  Y +KELV+ +A +LF Q  F    +   +  
Sbjct: 310 SHDWFGPGSRIIVTSRDKQVLTKI-VDDIYEVKELVHHEALQLFNQTTFKKKCVPEDYSY 368

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+D  I+YA+GVPLALKVLG +L G+SK  WESA+ KL+  PH   + VLKISYD LD  
Sbjct: 369 LSDLVIEYAKGVPLALKVLGSFLFGKSKTEWESALDKLKKAPHRATQNVLKISYDGLDAE 428

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +KN+FLDIACF  GE  + V  I D               KSLI + L  ++ MHDLL++
Sbjct: 429 EKNIFLDIACFFRGESVEMVTKILDGCGFSTKIGLCLLVDKSLITI-LNDKVEMHDLLQE 487

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+EIV +ES   P +R RLW+H+DI  V  +N GTE IEG+ L+ + +N+ I +NS AF
Sbjct: 488 MGKEIVLQES-KQPSQRTRLWNHEDILHVFSRNLGTETIEGMCLNTSMINK-IELNSNAF 545

Query: 482 SKMPKLRFLRFY-----GDKNKCMVSHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEK 531
            +M  LRFL+FY     G   +C    L +G+     E+R+L W   PLK+L   I    
Sbjct: 546 GRMYNLRFLKFYQSYIHGGFKECTKIRLPQGLDSLSNELRYLHWHGYPLKSLPARIHLMN 605

Query: 532 LVSLKMPCTKVEQLW----------------------------------------DDVQR 551
           LV L +P +KV++LW                                         +++ 
Sbjct: 606 LVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRITELTTASNLSYMKLSGCKNLRS 665

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVK 607
           +PS+   +K+  T E+  C  LE LP    +L++LE L++ G + ++  PE L  +  +K
Sbjct: 666 MPST-TRWKSLSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSNLQSFPEILESMDRLK 724

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS---ARNCTSLEK 664
            L+L N + ++ +P SI  L  L+ +++ +C  L  LPE  CNL  L       C  LEK
Sbjct: 725 VLVL-NGTAIKELPSSIERLKGLSSIYLENCRNLAHLPESFCNLKALYWLFLTFCPKLEK 783

Query: 665 LPAGLSSMSSV--LYVNLCNFLKLDP--NELSEIVK 696
           LP  LS+++++  L V +CN LKL    N LS I K
Sbjct: 784 LPEKLSNLTTLEDLSVGVCNLLKLPSHMNHLSCISK 819



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 164/340 (48%), Gaps = 41/340 (12%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRELPESLGRLS 604
            ++  LP S C  K      +  C  LE+LP++L NL   E L+V    + +LP  +  LS
Sbjct: 756  NLAHLPESFCNLKALYWLFLTFCPKLEKLPEKLSNLTTLEDLSVGVCNLLKLPSHMNHLS 815

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             + +L LS N   +++P S ++L  L  L IS C RL++LPE+P +L  + A +C SLE 
Sbjct: 816  CISKLDLSGNY-FDQLP-SFKYLLNLRCLDISSCRRLRSLPEVPHSLTDIDAHDCRSLET 873

Query: 665  LPAGLSSMSSVLYVN--------LCNFLKLDPNELSEIVKDG--WMKHSLYEERGIKK-S 713
            + +GL  +  + Y +          +  K+D +  S+ + D   W++      +  +  S
Sbjct: 874  I-SGLKQIFQLKYTHTFYDKKIIFTSCFKMDESAWSDFLADAQFWIQKVAMRAKDEESFS 932

Query: 714  MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGE 773
            +++PG++IPKWF +QS GSS  ++   PR   +N L+ F  C V+ F            E
Sbjct: 933  IWYPGSKIPKWFGYQSEGSSIVIQLH-PRSHKHN-LLGFTLCVVLAF----------EDE 980

Query: 774  DDWDGNVYAVCCDWKRKSEGHLY----------SWFLGKISYVESDHV--FLGCNSFGGE 821
             ++  + + V C ++ K+    Y          +   GK  YV SDHV  F   N    E
Sbjct: 981  FEYHNSFFDVLCVYQLKNYRGEYTDCKEVYSSRTHVSGKNKYVGSDHVILFYDPNFSSTE 1040

Query: 822  YFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                +Y+E SF  +   +    ++   VKKC    +Y+++
Sbjct: 1041 ANELSYNEASFEFYWQNNESCCMQSSMVKKCAAIPLYSRE 1080


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 369/1070 (34%), Positives = 509/1070 (47%), Gaps = 232/1070 (21%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            YD FLSFRGEDTR NFT+HLH  L  K I TF D+ L+RG+ IS  LL  IE S  +III
Sbjct: 22   YDAFLSFRGEDTRKNFTTHLHAALCQKGINTFKDNLLLRGEKISAGLLQAIEESRFSIII 81

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FSE YASS W                      FY VDPSHVRKQ   F   F+   + + 
Sbjct: 82   FSENYASSSWCLDELTKILECVEEGGHTALPVFYNVDPSHVRKQKGCFADAFAEHEQVYR 141

Query: 101  EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            EKM++   W+ ALTE A +SG+DS   R ES++IEEI   +L      F S    LVG++
Sbjct: 142  EKMEKVVKWRKALTEVATISGWDSRD-RDESEVIEEIVTRILNEPIDAFSSNVDALVGMD 200

Query: 158  CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
              +E++ SLLCIGS  V  + IWG+ GI K TIA A++++I   F+G  F  +VRE  + 
Sbjct: 201  SRMEDLLSLLCIGSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDSQR 260

Query: 218  GGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVT------------- 260
             G+  LQ+ LLS +   G + N+   +N    RL  KKV IV D+V              
Sbjct: 261  HGLTYLQETLLSRVL--GGINNLNRGINFIKARLHSKKVLIVLDNVVHRQELEALVGSHD 318

Query: 261  ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
                GSR+IITTR+K++L     +  Y +++L Y +A KLFCQ+AF   H     ++L  
Sbjct: 319  WFGPGSRIIITTREKRLLIEQEMDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCH 378

Query: 318  KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             A+ Y   +PLALKVLG  L  +S   W+S + K    P+ E+  VLK S+D LDD++KN
Sbjct: 379  HAVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKFNQFPNKEVLNVLKTSFDGLDDNEKN 438

Query: 378  VFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDLLRDMGREI 426
            +FLDIA F +GE +D VI + D             KSLI +    ++ MHDLL++MG EI
Sbjct: 439  MFLDIAFFYKGEDKDFVIEVLDNFFPVSEIGNLVDKSLITIS-DNKLYMHDLLQEMGWEI 497

Query: 427  VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
            VR+ESI  PGKR+RL  H+DI+ VL  N GTEA+EG+  D++  ++E++++  AF+KM K
Sbjct: 498  VRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLS-ASKELNLSVDAFAKMNK 556

Query: 487  LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT------------LNICA----- 529
            LR LRFY       +S     P   +R L W   PLK+            LN+C      
Sbjct: 557  LRLLRFY----NLHLSRDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQ 612

Query: 530  --------EKLVSLKMP------------------------CTKVEQLWDDV-------- 549
                    EKL  +K+                         CT + +L   +        
Sbjct: 613  LWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIF 672

Query: 550  ---------QRLPSSLCTFKTPITFEIIDCKMLERLPDEL-------------------- 580
                     + LP S+C   +  T  +  C  L++LPD+L                    
Sbjct: 673  LNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVT 732

Query: 581  ------ENLEYLTVKG-----------TTIRELPES------LGRLSWVKRLILSNNSNL 617
                   NLE L++ G            + R  P +      L  L  +K L LS+ + L
Sbjct: 733  SSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLL 792

Query: 618  E------------------------RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
            E                         +P S+  LS+L  L + HC+ L++LPELP ++  
Sbjct: 793  EGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEY 852

Query: 654  LSARNCTSLEKLPAGLSSMSSV---LYVNLCNFLKLDPNELSEIVKDGWMKHSLY----- 705
            L+A +CTSLE L    S+ +S    L  N  N  +L  N+ S+IV+       L      
Sbjct: 853  LNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNCFRLGENQGSDIVETILEGTQLASSMAK 912

Query: 706  ----EERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAV 757
                +ERG+ +  Y    PG+ IPKWF HQS+GS   ++  PP    YN K +  A C V
Sbjct: 913  LLEPDERGLLQHGYQALVPGSRIPKWFTHQSVGSKVIVEL-PPH--WYNTKWMGLAACVV 969

Query: 758  VVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNS 817
              F   +  +R       +    YA   D       H   W     S +ESDH +    S
Sbjct: 970  FNFKGAVDGYRGTFPLACFLNGRYATLSD-------HNSLW---TSSIIESDHTWFAYIS 1019

Query: 818  FG--GEYFGPNYDEFSFRIHCSFHF----PPYLERGEVKKCGIHFVYAQD 861
                   + P   E S  +  SF F          GEVKKCG+  VY +D
Sbjct: 1020 RAELEARYPPWTGELSDYMLASFLFLVPEGAVTSHGEVKKCGVRLVYEED 1069


>gi|255573549|ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis]
 gi|223532930|gb|EEF34698.1| ATP binding protein, putative [Ricinus communis]
          Length = 908

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 331/954 (34%), Positives = 496/954 (51%), Gaps = 165/954 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR++F SHL+  L  + I TF+D  L R + I+ ++  +IEAS  +I+I
Sbjct: 15  YDVFLSFRGTDTRNSFVSHLYAALCRERISTFLDIGLKRQEEITATMHKSIEASRTSIVI 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ Y +S W                      FY VDP  VRKQS +FG  FSR    F 
Sbjct: 75  FSKNYGASPWCLDELVKILECRKTMGQIVLPVFYEVDPREVRKQSGAFGEAFSRHVIDFT 134

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ RW+ AL EAA+ SG+     RPES +I +I N +LKRL     S   GL+G++  +
Sbjct: 135 DKVSRWRTALAEAANYSGWVLGDTRPESLVINDIVNYILKRLH-QLSSNLDGLIGMDSHV 193

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           +++E+LLC+GS     + IWG+GGI K TIA  +FNK+S  FE   F  N+RE     G+
Sbjct: 194 KQLETLLCLGSFDNRTVGIWGMGGIGKTTIARVIFNKMSGSFENRCFLGNIREKIGKTGL 253

Query: 221 KDLQKKLLSELSKDGNMR----NIESQ--LNRLARKKVRIVFDDVTS------------- 261
            +LQ++ L E+S   N+     ++ S   + RL  KKV +V DDV +             
Sbjct: 254 LNLQREFLCEISGGENISADTVDVMSSFIIKRLRNKKVLVVLDDVDNLMDLSSLTGGLNL 313

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+I+T+RDKQVL+ C  +  Y +K L   ++ +LF  +AF       ++  L+++
Sbjct: 314 FGPGSRIIVTSRDKQVLQYCGVDSIYEVKGLNNHESLQLFSHYAFEQSLPTEAYWNLSNR 373

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            ++YA+G+PLALK+ G +LC RS E WES + +LE   + E++EVL+ISY  LDD  K++
Sbjct: 374 VLQYAKGLPLALKICGSHLCTRSIEQWESILHRLESPLNSEVQEVLQISYYGLDDLDKDI 433

Query: 379 FLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACF  G+  D V  I   S             KSLI++    R+ MH+L+++MG E
Sbjct: 434 FLDIACFFRGQGIDHVKEILYDSGFYADIGIARLIGKSLISIS-DKRLEMHNLVQEMGWE 492

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ESI  PG R+RLW+H++IY VL  N GT A+ GI+LD++K+++ + ++S +F++M 
Sbjct: 493 IVRQESIYEPGSRSRLWNHEEIYHVLTSNKGTGAVRGINLDLSKIHK-LCLSSDSFTRMG 551

Query: 486 KLRFLRFYGDKNK-----CMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            L+FL+FY   +K       +  LEG+ +  A +R L W + PL +L  N    +LV L 
Sbjct: 552 NLKFLKFYTPFSKYWEDDSKLYALEGLAYLPASLRLLHWDRYPLNSLPSNFEPRQLVELI 611

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           +  +K+E LW+  + L SS                        L +LE+L ++G      
Sbjct: 612 LCHSKLELLWEGAKLLESSF---------------------SRLSSLEHLDLRG------ 644

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
                             +N   IP  IR L  L  L IS C  L++LPELP ++  ++A
Sbjct: 645 ------------------NNFSNIPGDIRQLFHLKLLDISSCSNLRSLPELPSHIEYVNA 686

Query: 657 RNCTSLE--KLPAG--LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK 712
            +CTSLE   +P+   +S  +  +++   N  KL+   LS  +   ++     +E G+  
Sbjct: 687 HDCTSLESVSIPSSFTVSEWNRPMFL-FTNCFKLN---LSAFLNSQFID---LQESGLLP 739

Query: 713 S--MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHK 770
           S  + FPG++IP+   HQS GS  T++   P     ++   FA  AV+ F          
Sbjct: 740 SAGICFPGSKIPEQISHQSAGSLLTVQL--PVHWSNSQFRGFALAAVIGF---------- 787

Query: 771 SGEDDWDGNVYAVCCDWKRKS---------------EGHLYSWFLGKISYVESDHVFLGC 815
             +D  D + + V C  K ++                GH   W   +I  + SDHVFL  
Sbjct: 788 --KDCLDNHGFLVKCTIKLRAMHGDSISLQQEFIIFHGHSGHWNNSRI--LGSDHVFLSY 843

Query: 816 NSFGG--EYFGPNYDEFSFRIHCSFHFPPYLERG------EVKKCGIHFVYAQD 861
           N      E  G ++   S     SF F      G      EV++CG     A++
Sbjct: 844 NHRVNLMESQGDDWQNKSCHTTASFDFYAVDSMGRPLCGSEVRECGFSLQLAEE 897


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 310/823 (37%), Positives = 444/823 (53%), Gaps = 132/823 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG+DTR+NFTSHL   L  + IKTFIDD+L RG+ I+ +LL TIE S ++I+I
Sbjct: 13  YDVFLSFRGKDTRNNFTSHLCKDLRRQKIKTFIDDRLERGEEITPALLKTIEESRVSIVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPS V +Q+ SFG  FS L K F 
Sbjct: 73  FSENYASSPWCLDELVKILECKETYGQIVLPVFYHVDPSDVDEQTGSFGNAFSELEKNFK 132

Query: 101 EKM---KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            KM    RW+  LT AA +SG+DS V  PE+KLI E+   + KRL+     K + LVGV+
Sbjct: 133 GKMGKVPRWRADLTYAASISGWDSQVTSPEAKLISEVVQTICKRLNRASPCKLRDLVGVD 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             IE+I  LL I +  V  + IWG+GGI K TIA A F  IS  +EG +F  N+R+  E 
Sbjct: 193 SRIEKINKLLSIVASDVRIIGIWGMGGIGKTTIAEAFFYSISSQYEGCHFLPNIRQESEK 252

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVT----------- 260
           G + DL+  LLS+L ++ N+R     +      +RL +KKV +V DDV            
Sbjct: 253 GPLSDLRDDLLSKLLEEENLRVGTPHIGPTFIRDRLCQKKVLLVLDDVNDARQFQQLIEV 312

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
               +GS V++T+RDKQVLKN  A++ Y ++EL   +A +LF   AF G+H   S++EL+
Sbjct: 313 PLIGAGSVVVVTSRDKQVLKNV-ADEIYEVEELNSHEALELFSLIAFKGNHPPKSYMELS 371

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQ 375
             AI YA+G PLAL+VLG +L  R +  WES +  +E  P + I ++L+I +D+L D++ 
Sbjct: 372 ITAINYAKGNPLALRVLGSFLIRRERHFWESQLNNIESFPELNICDLLRIGFDALRDNNT 431

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFY----------RIRMHDLLRDMG 423
           K++FLDIACF  G   D V  I D    K+ I   +            +++MHDLL++M 
Sbjct: 432 KSIFLDIACFFRGHQVDFVKRILDGCGFKTDIGFSVLIDRCLIKFSDDKVQMHDLLQEMA 491

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            E+VRKES+N  G ++R W  KD+YQVL  N GT  +EGI LD++K+ REI ++S A  +
Sbjct: 492 HEVVRKESLNELGGQSRSWSPKDVYQVLTNNQGTGKVEGIFLDVSKI-REIELSSTALER 550

Query: 484 MPKLRFLRFYGDKN--KCMVSHLEGVP--FAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           M KLR L+ Y  +   KC V    G+     E+R+L W   PL +L  N   + LV + +
Sbjct: 551 MYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNFRPQNLVEINL 610

Query: 538 PCTKVEQLW-----------------------------DDVQRLPSSLCT--FKTPITFE 566
            C+KV +LW                              +++RL    CT   K P + +
Sbjct: 611 SCSKVNRLWRGHQNLVNLKDVNLSNCEHITFMPDLSKARNLERLNLQFCTSLVKFPSSVQ 670

Query: 567 IID--------------------------------CKMLERLPDELENLEYLTVKGTTIR 594
            +D                                C  L++ P+    L YL +  T + 
Sbjct: 671 HLDKLVDLDLRGCKRLINLPSRINSSCLETLNVSGCANLKKCPETARKLTYLNLNETAVE 730

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP+S+G L+ +  L L N   L  +PE++  L  L    IS C  +  LP+   N+  L
Sbjct: 731 ELPQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRLPDFSRNIRYL 790

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
              N T++E+LP+ +  +  ++Y++L  CN LK  P+ +S++V
Sbjct: 791 YL-NGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLV 832



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 44/347 (12%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLE--------RLPD--ELENLEYLTVKGTTIRELPE 598
            + +LPS +   K     E+ +C+ L         +LP+  +L+ L  L + G  I E+P+
Sbjct: 936  ITKLPSPIGNLKGLACLEVGNCQHLRDIECIVDLQLPERCKLDCLRKLNLDGCQIWEVPD 995

Query: 599  SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
            SLG +S ++ L LS N N   IP SI  L +L +L + +C  L++LPELP  L  L A N
Sbjct: 996  SLGLVSSLEVLDLSGN-NFRSIPISINKLFELQYLGLRNCRNLESLPELPPRLSKLDADN 1054

Query: 659  CTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL---SEIVKDGWMKHSLYEERGIKK--- 712
            C SL      +S  S+ +  N+  F+  +   L   ++I++   +K  LY +R   +   
Sbjct: 1055 CWSLRT----VSCSSTAVEGNIFEFIFTNCKRLRRINQILEYSLLKFQLYTKRLYHQLPD 1110

Query: 713  ------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF--- 763
                  S   PG+  P+WF HQS GS  T +        + K + F+ CAV+ F +F   
Sbjct: 1111 VPEEACSFCLPGDMTPEWFSHQSWGSIVTFQL--SSHWAHTKFLGFSLCAVIAFHSFSHS 1168

Query: 764  ----LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CN 816
                  Y  H    D  D   Y   C +      +L+ W+  K   + S H+F+G   C 
Sbjct: 1169 LQVKCTYHFHNEHGDSHDLYCYLHVC-YGNDLYCYLHDWYGEK--RINSKHIFVGLDPCL 1225

Query: 817  SFGGEYFGPNYDEFS--FRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                      Y E S  F++     +   L+  +V +CG+  ++A D
Sbjct: 1226 VAKENDMFSKYSEVSVEFQLEDMNGYLLPLDLCQVVECGVRLLHAND 1272



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 23/152 (15%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP ++   K+ +  +I  C  + RLPD   N+ YL + GT I ELP S+G L  +  L L
Sbjct: 756 LPENMYLLKSLLIADISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDL 815

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLP-----------------ELPCN---- 650
              + L+ +P ++  L  L  L +S C  +   P                 E+P +    
Sbjct: 816 GGCNRLKNLPSAVSKLVCLEKLDLSGCSNITEFPKVSNTIKELYLNGTAIREIPSSIECL 875

Query: 651 --LGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
             L  L  RNC   E LP+ +  +  +  +NL
Sbjct: 876 FELAELHLRNCKQFEILPSSICKLRKLQRLNL 907



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 57/155 (36%), Gaps = 30/155 (19%)

Query: 713  SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF-----LKYF 767
            S Y PG+  P+WF HQ  GS+ T      + A     + F  CAV+ F +F     +K  
Sbjct: 1355 SFYLPGDVTPEWFSHQRWGSTVTFHL-SSQWANSKSFLGFCLCAVIAFCSFGHSLQVKCT 1413

Query: 768  RHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNY 827
             H   E     ++Y    DW  K               + S H+F+G   F         
Sbjct: 1414 YHFCNEHGDSHDLYFYLRDWYDK-------------ECINSTHIFVG---FDPCLVAKEK 1457

Query: 828  DEFSFRIHCSFHFPPY--------LERGEVKKCGI 854
            D FS     S  F P         L   +V +CG+
Sbjct: 1458 DMFSEYSEVSVEFQPADIYGNLLPLNLCQVYECGV 1492



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           ++ LPS++         ++  C  +   P     ++ L + GT IRE+P S+  L  +  
Sbjct: 821 LKNLPSAVSKLVCLEKLDLSGCSNITEFPKVSNTIKELYLNGTAIREIPSSIECLFELAE 880

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           L L N    E +P SI  L KL  L +S C + +  PE+
Sbjct: 881 LHLRNCKQFEILPSSICKLRKLQRLNLSGCVQFRDFPEV 919


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 301/785 (38%), Positives = 439/785 (55%), Gaps = 107/785 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT HLH  L  K IKTF DDQL RG+ IS +LL  IE S  +III
Sbjct: 23  YDVFLSFRGEDTRKSFTDHLHRELRRKWIKTFRDDQLRRGEQISPALLKAIEESRFSIII 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FS+ YASS W                      FY VDPSHVRKQ+ SF   F++    + 
Sbjct: 83  FSKNYASSSWCLDELTKILDCVEVMGHTAIPVFYNVDPSHVRKQTESFAEAFAKHDHIYG 142

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT A+ LSG+DS   R E+++I+E+   +  +L     S  +GLVG+ 
Sbjct: 143 DKSEKVLKWRKALTVASGLSGYDSR-DRHETEVIDEVVTMIFNKLIDASSSNMEGLVGMG 201

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF-EGSYFALNVREAEE 216
             ++++  LL IGS  V  + IWG+ GI K TIA  V+NKI   F EG  F  NVRE  +
Sbjct: 202 SRLQDMAQLLDIGSVDVRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREESQ 261

Query: 217 TGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT---------- 260
             G+  LQ++LLS++S  GN+      R I     RL  +KV IV DDV           
Sbjct: 262 RHGLAYLQEELLSQIS-GGNLNKGNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVLAG 320

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GSR+IITT+DK +L     +  Y ++ L Y +A KLFC  AF  D   A +++
Sbjct: 321 NHDWFGAGSRIIITTKDKTLLNMHGVDAIYNVEGLKYNEALKLFCWCAFKHDLPTADYMQ 380

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L    +KY +G+PLA+KVLG ++  ++ + W+SA+ KL+ IPH ++++VL+IS+D LDD+
Sbjct: 381 LCKNFVKYIEGLPLAIKVLGSFVKNKTIDEWKSALDKLKRIPHKDVQKVLRISFDGLDDN 440

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFY------------RIRMHDLLRDM 422
           QK++FLDIACF +G+ +D V  I ++       D+              ++ MH+LL++M
Sbjct: 441 QKDIFLDIACFFKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHNLLQEM 500

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+E++ +PGKR+RLW H ++  VL  NTGTEA+EG+ LD++  ++E+H ++ AF+
Sbjct: 501 GWEIVRQENVKYPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLS-ASKELHFSAGAFT 559

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           +M +LR LRFY  K    +  L       +R L W + PLK+L  N   +KLV L M  +
Sbjct: 560 EMNRLRVLRFYNVKMNGNLKFLSN----NLRSLYWHEYPLKSLPSNFHPKKLVELNMCSS 615

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELP 597
           ++EQLW   +       +F+     ++   + L R PD     NLE L ++G T++ ++ 
Sbjct: 616 RLEQLWKGDK-------SFEKLKFIKLSHSQYLTRTPDFSGAPNLERLILEGCTSMVKVH 668

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP------------ 645
            S+G L  +  L L    NL+    SI H++ L  L +S C +L+  P            
Sbjct: 669 PSIGALQKLIFLNLEGCKNLKSFASSI-HMNSLQILTLSGCSKLKKFPEMLENMKSLRQL 727

Query: 646 --------ELPCNLG------LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
                   ELP ++G      LL+  NC  L  LP  L  ++S+  + L  C+ LK  P+
Sbjct: 728 LLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPD 787

Query: 690 ELSEI 694
           EL  +
Sbjct: 788 ELGSL 792



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 156/402 (38%), Gaps = 110/402 (27%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELP----------- 597
            LP SLC   +     +  C  L++LPDEL +L     L   G+ I+E+P           
Sbjct: 761  LPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQV 820

Query: 598  -------------------------ESLGRLSWVKRLILSN------------------- 613
                                      SL  LS VK L LS+                   
Sbjct: 821  LSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLE 880

Query: 614  -----NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE--KLP 666
                  +N   IP S+  LS+L +L +SHC+ LQ++PELP  +  + A +C SLE   L 
Sbjct: 881  SLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETFSLS 940

Query: 667  AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-------------- 712
            A  S   + L     +  +L  NE S+ V  G +   +     I K              
Sbjct: 941  ACASRKLNQLNFTFSDCFRLVENEHSDTV--GAILQGIQLASSIPKFVDANKGSPVPYND 998

Query: 713  -SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLKYFRHK 770
              +  PG+ IP+WF HQ+MGSS T++  PP    YN KL+  A CAV             
Sbjct: 999  FHVIVPGSSIPEWFIHQNMGSSVTVEL-PPH--WYNAKLMGLAVCAVF-----------H 1044

Query: 771  SGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGE-----YFGP 825
            +   DW    Y++      + E    S+ L   S ++ DHV+ G  S  G+     +FG 
Sbjct: 1045 ADPIDWGYLQYSL-----YRGEHKYDSYMLQTWSPMKGDHVWFGYQSLVGQEDDRMWFGE 1099

Query: 826  NYDEFS--FRIHCSFHFPPYLE-RGEVKKCGIHFVYAQDSAD 864
                    F  HC       ++    VKKCG+   Y Q   D
Sbjct: 1100 RSGTLKILFSGHCIKSCIVCVQPEVVVKKCGVRLAYEQGDKD 1141


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 289/724 (39%), Positives = 414/724 (57%), Gaps = 113/724 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFTSHLH  L+ K I TFIDD L RG+ IS SLL  IE S I+++I
Sbjct: 23  YDVFLSFRGEDTRYNFTSHLHAALNGKKIPTFIDDDLERGNEISPSLLKAIEESKISVVI 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ Y SS+W                      FYRVDPSHVR Q+ SF   F+R  +   
Sbjct: 83  ISQDYPSSKWCLEELVKILECMKNRGQMVIPVFYRVDPSHVRNQTGSFEDVFARHEESLS 142

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
              EK++ W+ AL E A+LSG+ S   RPE++ ++EI   ++K+L+  +    ++GLVG+
Sbjct: 143 VSKEKVQSWRAALKEVANLSGWHSTSTRPEAEAVKEIIEVIVKKLNQMSPNCYSRGLVGM 202

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           E  I+EIESLLC+ S  V  + IWG+GG+ K T+A A++++I+  FE  YF  N RE  +
Sbjct: 203 ESRIQEIESLLCLRSSNVRIVGIWGMGGLGKTTLARAIYDRIAPQFEICYFLSNAREQLQ 262

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT-------------- 260
              + +LQ +L S L ++ +  N++     +RL RKKV IV DD                
Sbjct: 263 RCTLSELQNQLFSTLLEEQSTLNLQRSFIKDRLCRKKVLIVIDDADDSTQLQELLLESEP 322

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL- 315
               SGSR+IIT+RDKQVL+N   +K Y M++L   +A +LF   AF  D+    H  L 
Sbjct: 323 DYFGSGSRIIITSRDKQVLRNIARDKIYAMQKLKKHEALQLFSLKAFKQDNPTCRHCRLQ 382

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            ++ +KYA+G PLAL VLG  L G+ ++ W+SA+ +LE  P+ +I++VL+ISYD LD  +
Sbjct: 383 AERVVKYAKGNPLALTVLGSALFGKREKDWKSALERLERNPNKKIDDVLRISYDGLDSEE 442

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY------RIRMHDLLRD 421
           +++FLDIACF  G+ RD V    D           +LI+  +        ++ +HDLL++
Sbjct: 443 RSIFLDIACFFRGQDRDFVTKTLDGYYGSAHSVISTLIDRSVIMLSSDSSKLDLHDLLQE 502

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IV +ES N P  R+RLW  +D+  VL +N GTEAIEGISLD +K   EI +   AF
Sbjct: 503 MGRKIVFEESKN-PENRSRLWTPEDVCYVLNENRGTEAIEGISLDKSKATSEIRLKPDAF 561

Query: 482 SKMPKLRFLRFY---GD----------KNKCMVSH--LEGVPFAEVRHLEWPQCPLKTL- 525
           S+M +LRFL+FY   GD          K+K  +S   L+ +P  E+RHL W   P+K+L 
Sbjct: 562 SRMCRLRFLKFYKSPGDFYRSPGDRHSKDKLQISRDGLQSLP-NELRHLYWIDFPMKSLP 620

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPDELE 581
            +   E LV L +  +KV++LW   Q L          +  + ID    K L  +PD   
Sbjct: 621 PSFNPENLVVLHLRNSKVKKLWTGTQNL----------VKLKEIDLSGSKYLIGIPD--- 667

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
                             L +  +++++ LS+  NLE +  SI++L+KL FL + HC +L
Sbjct: 668 ------------------LSKAIYIEKIDLSDCDNLEEVHSSIQYLNKLEFLNLWHCNKL 709

Query: 642 QTLP 645
           + LP
Sbjct: 710 RRLP 713



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 26/226 (11%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRE 595
            C+K+E   + ++ + +    FK  +++    C+ L+  P+ + NL    YL + GT I++
Sbjct: 800  CSKLESFPEILEPMYN---IFKIDMSY----CRNLKSFPNSISNLISLTYLNLAGTAIKQ 852

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P S+  LS +  L L +   L+ +P SIR L +L  ++++ CE L +LPELP +L  L 
Sbjct: 853  MPSSIEHLSQLDFLDLKDCKYLDSLPVSIRELPQLEEMYLTSCESLHSLPELPSSLKKLR 912

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY 715
            A NC SLE+    ++S  ++      N L+LD       + D  +   +Y+ER     + 
Sbjct: 913  AENCKSLER----VTSYKNLGEATFANCLRLDQKSFQ--ITDLRVPECIYKER----YLL 962

Query: 716  FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLI-SFAFCAVVVF 760
            +PG+E+P  F  QSMGSS T+++     +   KL    AFC V  F
Sbjct: 963  YPGSEVPGCFSSQSMGSSVTMQS-----SLNEKLFKDAAFCVVFEF 1003


>gi|356554611|ref|XP_003545638.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 298/775 (38%), Positives = 446/775 (57%), Gaps = 85/775 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR +FTSHLH  L   +I T+ID ++ +GD I   ++  I+ S + ++I
Sbjct: 85  YDVFISFRGEDTRADFTSHLHAALRRNNIDTYIDYRIHKGDEIWVEIMKAIKESTLFLVI 144

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL---RK 97
           FSE YASS W                      FY++DPS VRKQS S+   F++    RK
Sbjct: 145 FSENYASSSWCLNELIQLMEYKKHEDVDVIPVFYKIDPSEVRKQSGSYHMAFAKHEKDRK 204

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              +KM++WKNAL EAA+LSGF S+  R ES +IE+I   +L++L+  + +  +G    +
Sbjct: 205 VTEDKMQKWKNALYEAANLSGFLSDAYRTESNMIEDIIKVILQKLNHKYPNDFRGQFVSD 264

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            +   IESLL I SE V  + IWG+GGI K TIA  +F+KIS  +EGS F  NV E  + 
Sbjct: 265 ENYASIESLLKIDSEEVRVIGIWGMGGIGKTTIAEVIFHKISSRYEGSSFLKNVAEESKR 324

Query: 218 GGIKDLQKKLLSELSKDG----NMRNIESQLNR-LARKKVRIVFDDVTS----------- 261
            G+  + K+LLS+L ++       + I S + R L RKKV IV DDV +           
Sbjct: 325 HGLNYICKELLSKLLREDLHIDTPKVIPSIITRRLKRKKVLIVLDDVNTSELLENLVGVG 384

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSRVI+TTRDK V+     +K + +K++ + ++ +LF   AFG  +    + EL
Sbjct: 385 RDWLGAGSRVIVTTRDKHVIMGEVVDKIHEVKKMNFQNSLELFSLNAFGKTYPQKGYEEL 444

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + +A+ YA+G+PLALKVLG  L  RS+  W+SA+ KL+ IP+ EI+ V ++SY+ LDD +
Sbjct: 445 SKRAMGYAKGIPLALKVLGSLLRSRSENEWDSALSKLKKIPNPEIQAVFRLSYEGLDDDE 504

Query: 376 KNVFLDIACFLEGEHRDEVISIFD--------ASKSLINLDLFYR------IRMHDLLRD 421
           KN+FLDI CF +G+ RD V  I +          +SL++  L         I MHDL+R+
Sbjct: 505 KNIFLDITCFFKGQRRDRVTKILNDCNFSADIGIRSLLDKALITITSDSNCIDMHDLIRE 564

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGRE+VR+ES+ +PG+R+RLW  +++  +L  N GT+ +EGI LDM +++  I+++S AF
Sbjct: 565 MGREVVREESMKNPGQRSRLWDPEEVIDILTNNGGTDTVEGIWLDMTQISY-INLSSKAF 623

Query: 482 SKMPKLRFLRFYGDKNK-------CMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            KMP +R L F   K +        +   LE +P   +R+L W   PL++L  + C EKL
Sbjct: 624 RKMPNMRLLAFQSPKGEFERINSVYLPKGLEFLP-KNLRYLGWNGYPLESLPSSFCPEKL 682

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-T 591
           V L MP + +E+LW  VQ LP +L       +  +++C  L   P    NL+Y++++G  
Sbjct: 683 VELSMPYSNLEKLWHGVQNLP-NLERIDLHGSKHLMECPKLSHAP----NLKYVSMRGCE 737

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++  + ES+  L  ++ L      N+  +PESI+ L KL  L +  C++LQ +P LP +L
Sbjct: 738 SLPYVDESICSLPKLEIL------NVSGLPESIKDLPKLKVLEVGECKKLQHIPALPRSL 791

Query: 652 GLLSARNCTSLEKLPAGL--SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
                 NC SL+ + +    SS        L N +KLD +    I+KD  ++  L
Sbjct: 792 QFFLVWNCQSLQTVLSSTIESSKRPNCVFLLPNCIKLDAHSFDAILKDAIVRIEL 846


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 299/823 (36%), Positives = 437/823 (53%), Gaps = 149/823 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL+FRGEDTR NFTSHLH  L   +I TFID++L+RG+ +S SLL  IE S I+++I
Sbjct: 23  YDVFLNFRGEDTRINFTSHLHDALLKNNILTFIDNELVRGEALSPSLLKAIEESKISVVI 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
            SE Y  S+W                      FY+VDPSHVR Q+ SF   F+R  +   
Sbjct: 83  LSENYPYSKWCLEELVKILECMKINGQMVIPVFYKVDPSHVRNQTGSFADAFARHEESLL 142

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGV 156
              +K+K W+ AL + A++SG+DS V  PES+LI++I  D+ ++L+    S + +G VG+
Sbjct: 143 VTEDKVKSWRAALKDVANISGWDSRVTSPESELIKKIIRDIWEKLNIMSSSYSPRGFVGI 202

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I++IE LLC+    V  + IWG+GGI K T+A A+++KIS  FE S F  N+RE  E
Sbjct: 203 QTRIKQIECLLCLKLSDVRIVGIWGMGGIGKTTLARAIYDKISHQFESSCFLSNIREQLE 262

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLN--------RLARKKVRIVFDDVTS------- 261
              +  L+ +L S L +   +    S LN        RL RKKV +V DD  S       
Sbjct: 263 RCTLPQLRDELFSSLLEKEIL--TPSTLNLRLSFIKDRLCRKKVLVVIDDADSLTQLQEL 320

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSR+IIT+RDKQVL+N   +K Y M++L   +A +LF   AF  D+  +
Sbjct: 321 LLESEPDYFGSGSRIIITSRDKQVLRNIARDKIYTMQKLKNHEALQLFSLNAFKQDYPTS 380

Query: 311 SHIEL-TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
               L +++ IKYA+G PLA++VLG  L  RS+E WESA+ +L  IP+ EI+ VL+ SYD
Sbjct: 381 DRCILQSERVIKYAKGNPLAIRVLGSALFNRSEEDWESALERLGKIPNKEIDNVLRTSYD 440

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            LD  ++N+FLDI CF  GEHR  V  I D               +SLI +   Y +++H
Sbjct: 441 GLDSDEQNIFLDIVCFFRGEHRGLVTKILDGCYPSAHIVITTLIDRSLITVSYGY-LKLH 499

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DLL++MGR IV  ES   P   +RLW  +D+  VLK+N GTE IEGISLD++K   E+ +
Sbjct: 500 DLLQEMGRNIVLNES-KIPESHSRLWIPEDVCYVLKENKGTEVIEGISLDISKARSELRL 558

Query: 477 NSYAFSKMPKLRFLRFY--------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
            S  F++M +LRFL  Y         DK +  +  L+ +P  E+RHL W + PLK+L  N
Sbjct: 559 RSNTFARMSRLRFLNLYRSPHDRDKKDKLQLSLDGLQTLP-TELRHLHWSEFPLKSLPSN 617

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQ-----------------RLPS--------------- 554
              E LV L +P +K+++LW  +Q                 R+P                
Sbjct: 618 FTPENLVVLSLPDSKLKKLWTGIQNLVKLKEIDLSGSEYLYRIPDLSKATNIEKIDLWGC 677

Query: 555 -SLCTFKTPITF-------EIIDCKMLERLPDELE-----------------------NL 583
            SL    + I +       +I +C  L RLP  ++                       NL
Sbjct: 678 ESLEEVHSSIQYLNKLEFLDIGECYNLRRLPGRIDSEVLKVFKVNDCPRIKRCPQFQGNL 737

Query: 584 EYLTVKGTTIRELPESLGRL---SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           E L +  T I ++  ++  +   S + +L + N   L  +P S   L  L  L + +   
Sbjct: 738 EELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDLDNWSE 797

Query: 641 LQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           L++ PE+     NL  ++ RNC  L++LP  + ++ S+ Y+++
Sbjct: 798 LESFPEILEPMINLEFITLRNCRRLKRLPNSICNLKSLAYLDV 840



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 161/337 (47%), Gaps = 47/337 (13%)

Query: 546  WDDVQRLPSSLCTFKTPITFEII---DCKMLERLPDE---LENLEYLTVKGTTIRELPES 599
            W +++  P  L   +  I  E I   +C+ L+RLP+    L++L YL V+G  I+E+P S
Sbjct: 795  WSELESFPEIL---EPMINLEFITLRNCRRLKRLPNSICNLKSLAYLDVEGAAIKEIPSS 851

Query: 600  LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
            +  L  +  L L++  +LE +P SI  L +L  L +  C+ L++LPE P +L  L A NC
Sbjct: 852  IEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLELYSCKSLRSLPEFPLSLLRLLAMNC 911

Query: 660  TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
             SLE +    +   ++  +   N L+LDP  L  + +        +        + +PG+
Sbjct: 912  ESLETISISFNKHCNLRILTFANCLRLDPKALGTVARAASSHTDFF--------LLYPGS 963

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGN 779
            EIP+WF HQSMGSS TL+     P    +  + AFC V  F    K    KSG    D  
Sbjct: 964  EIPRWFSHQSMGSSVTLQF----PVNLKQFKAIAFCVVFKF----KIPPKKSG----DYY 1011

Query: 780  VYAVC---CDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNY-DEFSFRIH 835
              A C   CD        L S+     S+VE+ HV +   S       P Y +++S  I 
Sbjct: 1012 FIARCVEDCDKAVFQPARLGSY---TFSFVETTHVLIWHES-------PGYLNDYSGTIS 1061

Query: 836  CSFHFPPYLER--GEVKKCGI-HFVYAQDSADHILKD 869
             SF F P  ++  GE  K  + ++ ++ +    I KD
Sbjct: 1062 -SFDFYPCKDQRNGEFAKYQVGYYPWSDERYGEITKD 1097


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 295/805 (36%), Positives = 431/805 (53%), Gaps = 129/805 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR+NFTSHL+  L  K IKTFIDD L RG+ I+ +LL  IE S I+++I
Sbjct: 13  YDVFLSFRGEDTRNNFTSHLYDALCRKKIKTFIDDGLERGEEITPALLKKIEESRISVVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY VDPS V +Q+ SFG  FS L   F 
Sbjct: 73  FSKNYASSPWCVDELVKILECKETCGQIVLPVFYHVDPSDVDEQTGSFGNAFSELENIFK 132

Query: 101 EKMK---RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            KM    RW+  +T AA +SG+DS V  PESKL+ E+   + KRL+   +SK +GLVGV+
Sbjct: 133 GKMDKVPRWRADMTYAASISGWDSQVTSPESKLVTEVVQTIWKRLNRASRSKLRGLVGVD 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             IE+I  LL +    V ++ IWG+G I K TIA A F  IS  +EG +F  N+R+  E 
Sbjct: 193 SRIEQINKLLSVVPSDVRRIGIWGMGAIGKTTIAEAFFYSISSQYEGCHFLPNIRQESEK 252

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL-----NRLARKKVRIVFDDVTS----------- 261
           G + DL+ +LLS+L ++ N+R     +     +RL +KKV +V DDV             
Sbjct: 253 GRLNDLRDELLSKLLEEENLRVGTPHIPTFIRDRLCQKKVLLVLDDVIDVRQFQHLIEMP 312

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS +++T+RD+QVLKN   ++ Y ++EL   +A +LF   AF G+H   +++EL+ 
Sbjct: 313 LIGPGSVLVVTSRDRQVLKNV-VDEIYEVEELNSHEALQLFSLNAFKGNHPPKAYMELSI 371

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQK 376
            AI YA+G PLAL+VLG YL  + ++ WES + ++E  P + I ++L+I +D+L D++ K
Sbjct: 372 TAINYAKGNPLALQVLGSYLFDKGRQFWESQLNEIESFPELNIYDLLRIGFDALRDNNTK 431

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMGR 424
           ++FLD+ACF  G   D V  I D            LI+  L      ++ MHDLL++M  
Sbjct: 432 SIFLDVACFFRGHRVDFVKRILDGCGFKTDTGFSVLIDRCLIKISDDKVEMHDLLQEMAH 491

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           E+VRKES++  G+++RLW  KD+YQVL  N GT  +EGI LD++K  REI ++S A  +M
Sbjct: 492 EVVRKESVDELGRQSRLWSPKDVYQVLTNNLGTGKVEGIFLDVSKT-REIELSSTALERM 550

Query: 485 PKLRFLRFYGDKN--KCMVSHLEGVP--FAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
            KLR L+ Y  +   KC V    G+     E+R+L W   PL +L  N   + LV L + 
Sbjct: 551 YKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPCNFRPQNLVELNLS 610

Query: 539 CTKVEQLW-----------------------------DDVQRLPSSLCT--FKTPITFEI 567
            + V+QLW                              +++RL    CT   K P + + 
Sbjct: 611 SSNVKQLWRGDQNLVNLKDVNLSNCEHITLLPDLSKARNLERLNLQFCTSLVKFPSSVQH 670

Query: 568 ID--------------------------------CKMLERLPDELENLEYLTVKGTTIRE 595
           +D                                C  +++ P+    L YL +  T + E
Sbjct: 671 LDKLVDLDLRGCKRLINLPSRFNSSFLETLNLSGCSNIKKCPETARKLTYLNLNETAVEE 730

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           LP+S+G L  +  L L N   L  +PE++  L  L    IS C  +   P+   N+  L 
Sbjct: 731 LPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRFPDFSRNIRYLY 790

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNL 680
             N T++E+LP+ +  +  ++Y++L
Sbjct: 791 L-NGTAIEELPSSIGDLRELIYLDL 814



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 58/346 (16%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLE--------RLPDELENLEYL---TVKGTTIRELP 597
            + +LPS +   K     E+ +CK L+         LP+   +L+YL    + G  I ++P
Sbjct: 876  ITKLPSPVGNLKGLACLEVGNCKYLKGIECLVDLHLPERDMDLKYLRKLNLDGCCISKVP 935

Query: 598  ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
            +SLG LS ++ L LS N N E +P +I  L +L +L +  C +L+++P LP  L  L A 
Sbjct: 936  DSLGCLSSLEVLDLSGN-NFETMPMNIYKLVELQYLGLRSCRKLKSIPRLPRRLSKLDAH 994

Query: 658  NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER-----GIKK 712
            +C SL K+ +      ++      N L+L    +++I+    +K  LY ER         
Sbjct: 995  DCQSLIKVSSSYVVEGNIFEFIFTNCLRLPV--INQILLYSLLKFQLYTERLHQVPAGTS 1052

Query: 713  SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF--------L 764
            S   PG+  P+WF HQS GS+ T           ++ + F+  AV+ F +F         
Sbjct: 1053 SFCLPGDVTPEWFSHQSWGSTVTFHL--SSHWANSEFLGFSLGAVIAFRSFGHSLQVKCT 1110

Query: 765  KYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFG 824
             +FR+K G+     ++Y            +L+ W+  +   ++S+H+F+G   F      
Sbjct: 1111 YHFRNKHGDSH---DLYC-----------YLHGWYDER--RMDSEHIFIG---FDPCLIA 1151

Query: 825  PNYDEFSFRIHCSFHFP---------PYLERGEVKKCGIHFVYAQD 861
              +D FS     S  F          P L+  +V +CG+  ++ +D
Sbjct: 1152 KEHDMFSEYSEVSVEFQLEDMSGNLLP-LDLCQVVECGVRLLHVKD 1196



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP ++   K+ +  +I  C  + R PD   N+ YL + GT I ELP S+G L  +  L L
Sbjct: 755 LPENMYLLKSLLIADISGCSSISRFPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDL 814

Query: 612 SNNSNLERIPESIRHLSKLTF-----------LFISHCERLQTLP-ELPCNLGLLSARNC 659
           S  S++   P+  R++ +L             + ++ C        E   NL    A + 
Sbjct: 815 SGCSSITEFPKVSRNIRELYLDGTAIREIPSSIQLNVCVNFMNCTCETANNLRFFQAAS- 873

Query: 660 TSLEKLPAGLSSMSSV--LYVNLCNFLK 685
           T + KLP+ + ++  +  L V  C +LK
Sbjct: 874 TGITKLPSPVGNLKGLACLEVGNCKYLK 901


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 304/795 (38%), Positives = 431/795 (54%), Gaps = 123/795 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRGEDTR +FT HLH  L    I TFIDDQL RG+ IS +LL  IE S  +III
Sbjct: 21  YEVFLSFRGEDTRKSFTDHLHEALHRCGINTFIDDQLRRGEQISSALLQAIEESRFSIII 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ+ S+G  F++  K + 
Sbjct: 81  FSEHYASSSWCLDELTKILECVKVGGHTVFPVFYNVDPSHVRKQTGSYGVAFTKHEKVYR 140

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT A+ LSG+DS   R ESK+I+EI + +   L+       + LVG++
Sbjct: 141 DNMEKVLKWREALTVASGLSGWDSRD-RHESKVIKEIVSKIWNELNDASSCNMEALVGMD 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+ + SLLCIGS+ V  + IWG+ GI K TIA AV+ KI   FEG  F  NVRE  + 
Sbjct: 200 SHIQNMVSLLCIGSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFEGCCFLSNVREKSQK 259

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT----------- 260
                +Q +LLS++  +GN+      R I +    L   +V IV DDV            
Sbjct: 260 NDPAVIQMELLSQVFWEGNLNTRIFNRGINAIKKTLHSMRVLIVLDDVDRPQQLEVLAGN 319

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTR+K +L      + Y +KEL   +A +LF Q AF         ++L
Sbjct: 320 HNWFGPGSRIIITTREKHLLDE--KVEIYEVKELNKDEARRLFYQHAFKYKPPAGDFVQL 377

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            D+A+ Y +G+PLALK+LG +L  RSK+ WES + KL  IP+ EI++VL+IS+D LDD+Q
Sbjct: 378 CDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLDDNQ 437

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           K++F DIACF +G+ +D VI +  +              KSL+ +  + ++ MHDL+++M
Sbjct: 438 KDIFFDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTIS-YNKLCMHDLIQEM 496

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+ES+  PGKR+RLW + D+  +L  NTGTEA+EG+ L+++ + +E+H +   F+
Sbjct: 497 GWEIVRQESMKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTL-KELHFSVNVFT 555

Query: 483 KMPKLRFLRFY-------------GDKNKCMVS----HLEG---VPFAEVRHLEWPQCPL 522
           KM KLR LRFY              D+ K   +    HL G        +R L W   PL
Sbjct: 556 KMNKLRVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDGYPL 615

Query: 523 KTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-- 578
           K+L  N   EKL+ LKM  +++EQLW+  +       +F+     E+   + L + PD  
Sbjct: 616 KSLPSNFHPEKLLELKMCFSQLEQLWEGNK-------SFQKLKFIELSHSQHLIKAPDFS 668

Query: 579 ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
               L  + ++G T++ ++  S+G L  +  L L    NL+    SI HL  L  L +S 
Sbjct: 669 GAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSI-HLESLQILTLSG 727

Query: 638 CERLQTLPE--------------------LPCN------LGLLSARNCTSLEKLPAGLSS 671
           C +L+ LPE                    LP +      L L +   C SLE LP  +  
Sbjct: 728 CSKLKKLPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCIFK 787

Query: 672 MSSVLYVNLCNFLKL 686
           + S+  + L N L+L
Sbjct: 788 LKSLKTLILSNCLRL 802



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 118/287 (41%), Gaps = 49/287 (17%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            LP  L  LSW++ L LS N N   +P S+  L  L  L + HC+ LQ+LPELP ++  L 
Sbjct: 965  LPSDLSSLSWLECLDLSRN-NFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELL 1023

Query: 656  ARNCTSLEKL--PAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
            A +CTSLE    P+    +      N    N  +L  NE S+ V+    +  L     I+
Sbjct: 1024 ANDCTSLETFSYPSSAYPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVA--SIQ 1081

Query: 712  KSM----------------YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
            KSM                  PG+ IP+WF HQS G S T++  PP     N  I  A C
Sbjct: 1082 KSMAPSEHSARYGESRYDAVVPGSRIPEWFTHQSEGDSITVEL-PPGCYNTNS-IGLAAC 1139

Query: 756  AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGC 815
            AV       K+   K G   +          +     G         + + ++DH++ G 
Sbjct: 1140 AVF----HPKFSMGKIGRSAY----------FSVNESGGFSLDNTTSMHFSKADHIWFGY 1185

Query: 816  NSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEV-KKCGIHFVYAQD 861
                G            R H    F      GEV KKCG+  VY QD
Sbjct: 1186 RLISG---------VDLRDHLKVAFATSKVPGEVVKKCGVRLVYEQD 1223



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 9/139 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LP  +   K+  T  + +C  L++LP+  EN+E L    +  T +RELP S+  L+ 
Sbjct: 778 LESLPGCIFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNG 837

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCTS 661
           +  L L N   L  +PESI  L+ L  L +S C  L+ LP+    L C L L +  N + 
Sbjct: 838 LVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKA--NGSG 895

Query: 662 LEKLPAGLSSMSSVLYVNL 680
           ++++P+ ++ ++ +  ++L
Sbjct: 896 IQEVPSSITLLTRLQVLSL 914


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 296/747 (39%), Positives = 419/747 (56%), Gaps = 95/747 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR  F SHL+  L  K I TFID +L RG+ IS SLL  IE S +++++
Sbjct: 15  YDVFLSFRGEDTRVCFVSHLYAALKRKQISTFIDYKLNRGEEISPSLLKAIEDSKLSVVV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS+W                      FYRVDPSHVR Q+ SF   F+R  +   
Sbjct: 75  FSDNYASSKWCLEELAKILECKKVKGQMVIPVFYRVDPSHVRNQTGSFADAFARHDQLLK 134

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGV 156
           EKM++   W+ A+ EAA+LSG+DS+ I+ ES+ +++I  D+L +L  T  S +   L+G+
Sbjct: 135 EKMEKVLNWRAAMREAANLSGWDSHNIKSESEFVDDIVRDILNKLHQTSMSTHHTSLIGI 194

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+++E+LL + S+ V  + IWG+GGI K TIA AV++ +S  FEG  F  NVRE  +
Sbjct: 195 DARIKKVETLLKMESQDVRIVGIWGMGGIGKTTIAKAVYDNVSAQFEGFLFVANVREEIK 254

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIES-------QLNRLARKKVRIVFDDVTS-------- 261
              +  LQK +L EL  D ++ N           ++RL RKKV IV DDV S        
Sbjct: 255 RHSVVGLQKNILPEL-LDQDILNTGPLSFGNAFVMDRLLRKKVLIVLDDVDSSRQLEELL 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS++++T+RDKQVL N   ++ Y ++ L + +A +LF   AF   +    H
Sbjct: 314 PEPHVSFGPGSKILLTSRDKQVLTNV-VDEIYDVERLNHHEALQLFNMKAFKNYNPTIDH 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL +K + YAQG PLAL VLG  L GRSKE W S + KL  +   EI+ VL+ISYD LD
Sbjct: 373 SELVEKIVDYAQGNPLALIVLGSALYGRSKEEWCSVLNKLGKVSSREIQNVLRISYDGLD 432

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLD---LFYR---------IRMHDLLR 420
           D Q+ +FLD+A F  G +RD V  I D   S   LD   LF +         + MHD LR
Sbjct: 433 DEQQEIFLDLAFFFNGANRDRVTKILDGCYSAACLDISVLFEKSLITTPGCTVNMHDSLR 492

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +M   IVR+ES   PGKR+RL   +D+YQ L K  GTEA+EGI LD+++ +RE+H+ S A
Sbjct: 493 EMAFSIVREES-KIPGKRSRLCDPEDVYQALVKKKGTEAVEGICLDISE-SREMHLKSDA 550

Query: 481 FSKMPKLRFLRFYG-----------DKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL-- 525
           FS+M +LR L+F+            +K+K  + H  G+ +   E+R+L W   PLKTL  
Sbjct: 551 FSRMDRLRILKFFNHFSLDEIFIMDNKDKVHLPH-SGLDYLSDELRYLHWDGFPLKTLPQ 609

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLP--SSLCTFKTPITFEIIDCKMLERLPDELENL 583
           + CAE +V L  P +K+E+LW  VQ L     +    +P   EI D  M        EN+
Sbjct: 610 SFCAENIVELIFPDSKIEKLWTGVQDLVHLRRMDLSGSPYLLEIPDLSM-------AENI 662

Query: 584 EYLTVK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           E + +K   ++ E+  S+  L+ ++ L LS   NL  +P  I     L  L + HC  ++
Sbjct: 663 ESINLKFCKSLIEVNPSIQYLTKLEVLQLSYCDNLRSLPSRIGS-KVLRILDLYHCINVR 721

Query: 643 TLPELPCNLGLLSARN---CTSLEKLP 666
             P +  N  +L   +   C ++ K P
Sbjct: 722 ICPAISGNSPVLRKVDLQFCANITKFP 748



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 146/349 (41%), Gaps = 68/349 (19%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKR 608
            +PSS+C  K+     +  C  LE  P+    +E+L  L +  T I+ELP S+  L ++ +
Sbjct: 791  IPSSICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKELPSSIKYLKFLTQ 850

Query: 609  LILS----------------------NNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            L L                         + ++ +P SI HL  L  L +S    ++ LPE
Sbjct: 851  LKLGVTAIEELSSSIAQLKSLTHLDLGGTAIKELPSSIEHLKCLKHLDLSGT-GIKELPE 909

Query: 647  LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE 706
            LP +L  L   +C SL+ L     ++ +   +N  N  KLD  +L   + D   K    E
Sbjct: 910  LPSSLTALDVNDCKSLQTLSR--FNLRNFQELNFANCFKLDQKKL---MADVQCKIQSGE 964

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKY 766
             +G    +  P +EIP WFR Q+MGSS T K     P   +++   AFC V   P  L  
Sbjct: 965  IKGEIFQIVLPKSEIPPWFRGQNMGSSVTKKL----PLNCHQIKGIAFCIVFASPTPLLS 1020

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYS---WF-------LGKISYVESDHVFLGCN 816
                      D   ++  CD K  +  H +    W+              +SDH+ L   
Sbjct: 1021 ----------DCANFSCKCDAKSDNGEHDHVNLLWYDLDPQPKAAVFKLDDSDHMLLWYE 1070

Query: 817  S----FGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            S       EY G            +F F   +E  ++K+CG++F++ ++
Sbjct: 1071 STRTGLTSEYSGS---------EVTFEFYDKIEHSKIKRCGVYFLFDKN 1110



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 570 CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           C  + + P+   N++YL ++GT I E+P S+  L+ + RL ++N   L  IP SI  L  
Sbjct: 741 CANITKFPEISGNIKYLYLQGTAIEEVPSSIEFLTALVRLYMTNCKQLSSIPSSICKLKS 800

Query: 630 LTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           L  L +S C +L+  PE+  P         + T++++LP      SS+ Y+     LKL 
Sbjct: 801 LEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKELP------SSIKYLKFLTQLKLG 854

Query: 688 PNELSEI 694
              + E+
Sbjct: 855 VTAIEEL 861


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 293/780 (37%), Positives = 431/780 (55%), Gaps = 117/780 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGEDTR +FT HL+  L    + TF DD+ L RGD I+  LL  IE S I+I
Sbjct: 12  IYDVFLSFRGEDTRYHFTDHLYSALRDNGVHTFRDDEELERGDVIAPGLLKAIEQSRISI 71

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR---- 94
           ++FSE+YA SRW                      FY VDPSHVRKQ  S+G  F+     
Sbjct: 72  VVFSEKYAQSRWCLDELVKIIECMTERKQIVLPVFYHVDPSHVRKQMGSYGEAFADHEKD 131

Query: 95  --LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
             L+KR  EK+++W+ ALTE ++LSG+     + ES +I+EI + ++ RL+       K 
Sbjct: 132 ADLKKR--EKIQKWRTALTETSNLSGWHLRDNQSESNVIKEITDKIITRLNPRSLYVGKN 189

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +VG+   +E++ SL+ I S  VC + I G+GGI K TIA A++NKIS  F+G+ F  NVR
Sbjct: 190 IVGMNIRLEKLISLINIDSNDVCFVGICGLGGIGKTTIAKALYNKISNQFQGASFLANVR 249

Query: 213 E-AEETGGIKDLQKKLLSELSKDGN--MRNIESQLNR----LARKKVRIVFDDVTS---- 261
           E +E+   I  LQ++LL ++ K  N  + N+   ++     L+ ++V +V DDV +    
Sbjct: 250 ENSEKHSDILQLQRQLLDDIDKGKNRKISNVHEGMDAIKKVLSLRRVLVVLDDVDNFEQL 309

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR++ITTR+K +L     +K + ++EL   +A +LF  +AF      
Sbjct: 310 NHFAGEHDWFGPGSRILITTRNKHLLH---VDKYHEIEELNSEEALQLFSLYAFKPTCHQ 366

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             + +L D+ +KYA+G+PLAL+VLG +LC R+   WES + KLE  P  EI+ VLKISYD
Sbjct: 367 EDYEDLQDRIVKYAKGLPLALQVLGSHLCERTPSEWESELHKLEREPIQEIQNVLKISYD 426

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            LD +Q  +FLDIACF +G+ +D V  I D               K LI + L  +I MH
Sbjct: 427 GLDRTQGEIFLDIACFFKGQDKDFVSRILDGCDFYAESGFSVLCDKCLITI-LDNKIYMH 485

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL++ MG  IVR+++   PGK +RLW  +D+++VL +N GTEAI+GI LDM+  ++++  
Sbjct: 486 DLIQQMGWHIVREQNPEKPGKWSRLWEREDVFRVLTRNEGTEAIKGIFLDMS-TSKQLQF 544

Query: 477 NSYAFSKMPKLRFLRFYGDKN-----------KCMVSHLEGV--------PFAEVRHLEW 517
            + AF  M  LR L+ + D N                HL  V        P  E+R+L W
Sbjct: 545 TTEAFKVMNDLRLLKVHQDANYDSAVKYWTLAGLFEMHLSQVHFCRDFEFPSQELRYLHW 604

Query: 518 PQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD----------------VQRLPSSLCTF 559
              PL++L  N  AE LV L + C+ ++QLW+                 + ++P+  C  
Sbjct: 605 DGYPLESLPSNFYAENLVELNLRCSNIKQLWETELFKKLKVINLSHSKHLNKIPNPSCVP 664

Query: 560 KTPITFEIIDCKMLERLPD---ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNS 615
              I   +  C  LE LP    +L  L+ L   G   +R  PE +G +  +++L L +N+
Sbjct: 665 NLEI-LTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKLRKLDL-DNT 722

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSM 672
            + ++P SI HL  L +L +S+C+ L T+P+  CNL  L   N   C+ LEKLP  L S+
Sbjct: 723 AIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSL 782



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 8/138 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT----IRELPESLGRLS 604
            ++ +PSS+ +    + F   +CK LE LP  +  L+YL V   T    +   PE +  ++
Sbjct: 1146 IKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLGSFPEVMENMN 1205

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN---LGLLSARNCTS 661
             ++ L L + + ++ +P SI +L  L FL ++ C++L TLP   CN   L  L    C+ 
Sbjct: 1206 NLRELHL-HGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVYGCSK 1264

Query: 662  LEKLPAGLSSMSSVLYVN 679
            L KLP  L S+  + +++
Sbjct: 1265 LNKLPKSLGSLQCLEHLD 1282



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 49/303 (16%)

Query: 466 DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHL-EWPQCPLKT 524
           DM K+ R++ +++ A  K+P               + HL+G+ + ++ +  +    P   
Sbjct: 710 DMEKL-RKLDLDNTAIVKLPS-------------SIEHLKGLEYLDLSNCKDLITVPQSI 755

Query: 525 LNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
            N+ + K ++    C+K+E+L +D++ L    C  K  +  + ++C++       L +L+
Sbjct: 756 CNLTSLKFLNFDF-CSKLEKLPEDLKSLK---CLQK--LYLQDLNCQLPSV--SGLCSLK 807

Query: 585 YLTVKGTTIR--ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
            L +    +   E+P  + +LS +K L LS N +   IP SI  LSKL  L +SHC  L 
Sbjct: 808 VLNLSECNLMDGEIPSEVCQLSSLKELDLSWN-HFSSIPASISQLSKLKALGLSHCRNLL 866

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
            +PELP  L  L A N              S     +  +FL    +E  + V     + 
Sbjct: 867 QIPELPSTLQFLDAHN--------------SHFTLSSPSSFLPSSFSEFQDFVCGSSFQL 912

Query: 703 SL-----YEERGIKKSMYFPG-NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
            +     Y E G+  S++FPG + IP+W   ++MG+  T+   P         + FA C+
Sbjct: 913 CVCYSYSYFEEGV--SIFFPGISGIPEWIMGENMGNHVTIDL-PQDWFEDKDFLGFALCS 969

Query: 757 VVV 759
             V
Sbjct: 970 AYV 972



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 104/267 (38%), Gaps = 70/267 (26%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT-----VKGTTIRELP--------- 597
            LP+ +C  K+  T  +  C  L +LP  L +L+ L        G+    LP         
Sbjct: 1244 LPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLR 1303

Query: 598  ---------------ESLGRLSWVKRLILSN------------------------NSNLE 618
                           + + RL  ++ L L+N                         +++ 
Sbjct: 1304 ILHLNGLNLMQWSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHIS 1363

Query: 619  RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
            +IP  I  LSKL  L  SHCE    +PELP +L  +    CT L      LS+ SS+ + 
Sbjct: 1364 KIPAGISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGL----ITLSNPSSLFWA 1419

Query: 679  NLCNFLKLDPNELS------EIVKDGWMKHSLYEERGIKKSMYFP-GNEIPKWFRHQSMG 731
            +L    K    +L       +   + W     Y  +GI  S+  P  + IP+W RHQ  G
Sbjct: 1420 SLFKCFKSAIQDLECGNHCYDPSPEAWPDFC-YFGQGI--SILIPRSSGIPEWIRHQKNG 1476

Query: 732  SSATLKTRPPRPAGYNK-LISFAFCAV 757
            S  T  T  PR    NK L+ FA  +V
Sbjct: 1477 SRVT--TELPRYWYKNKDLLGFALFSV 1501



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 4/118 (3%)

Query: 573  LERLPD--ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
            L  +PD   +E L+ L + GT I+E+P S+  LS +      N  NLE +P SI  L  L
Sbjct: 1124 LTTMPDTWNMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYL 1183

Query: 631  TFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKL 686
              L  ++C +L + PE+  N+  L   +   T+++ LP+ + ++  + +++L +  KL
Sbjct: 1184 QVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKL 1241



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLS 604
            +++ LP S+C  K        +C  L   P+ +EN   L  L + GT I++LP S+  L 
Sbjct: 1169 NLESLPRSICRLKYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLK 1228

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L L++   L  +P  I +L  L  L +  C +L  LP+   +L  L   +   L  
Sbjct: 1229 GLEFLDLASCKKLVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGS 1288

Query: 665  LPAGLSSMSS-----VLYVNLCNFLK 685
            +   L S S      +L++N  N ++
Sbjct: 1289 IAPPLPSFSGLCSLRILHLNGLNLMQ 1314


>gi|317106744|dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 318/870 (36%), Positives = 463/870 (53%), Gaps = 138/870 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTRD+FTSHL+  L  K I+TFID+ L+RG  IS SLL  IE S I++ I
Sbjct: 10  YDVFLSFRGEDTRDSFTSHLYAALCDKKIQTFIDNNLVRGKEISSSLLKAIEESKISVPI 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
            SE YASS+W                      FYR+ PS VR Q+ SF   F+R  K   
Sbjct: 70  LSENYASSKWCLEELAEIIKCMKKNGQIVIPVFYRIRPSDVRNQTGSFHDAFARYEKSLM 129

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              +K++RW+ AL E A LSG+DS  IRPES LI E+  D+LK+L+  F S + GL+G++
Sbjct: 130 VNKDKVQRWRAALKEVAGLSGWDSMAIRPESTLIHEVLKDILKKLNRIFPSYSSGLIGID 189

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+ IE+L+ + S     + IWG+GG  K T+A A +++IS  FE SYF  + R+ +  
Sbjct: 190 SRIKHIEALISMESSAARTVGIWGMGGSGKTTLARATYDRISYQFERSYFLSDFRK-QGK 248

Query: 218 GGIKDLQKKLLSEL--SKDGNMRNIESQL-----NRLARKKVRIVFDDVTS--------- 261
             +  L+  L + +   KD  MRN++  L     +R+ R KV +V DDV S         
Sbjct: 249 NSLFQLRDSLFTFILNEKDLKMRNLDLCLTDYIQDRIRRTKVLLVVDDVDSSAQLNQLLA 308

Query: 262 ------GSR--VIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                 GSR  +++T+R++QVLKN   +  Y M EL   +A +LF   AF   +  + H+
Sbjct: 309 TEYSLFGSRSVILVTSRNRQVLKNV-VDVIYPMMELNEHEALRLFSLNAFKQAYPSSDHM 367

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           E + + I Y +G PLALKVLG  L  RS+E W SA+++LE IP  EI  VL++SYD LD 
Sbjct: 368 EKSKRVIAYTKGNPLALKVLGSLLFDRSEEYWCSALKRLENIPKPEIHNVLRVSYDVLDS 427

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            ++ +FLD+ACF  G++ D++I+I D               + LI +    R+ +HDLL+
Sbjct: 428 EEQRIFLDVACFFTGKNLDDIITILDGYFSSVYLTIKTLIDRCLITVSWDKRLEVHDLLQ 487

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGR+IV  ESI  P  R+RLW+ +DI  +L +N GTEAIEGI LD++K  REI +   A
Sbjct: 488 EMGRKIVNDESI-RPENRSRLWNPEDIRHILLENKGTEAIEGICLDLSKA-REICLRRDA 545

Query: 481 FSKMPKLRFLRFYGDKNKC-----MVSHLEGVPF--AEVRHLEWPQCPLKTLN--ICAEK 531
           F+ M  LR+L+FY  K+       M  +  G+ F    +R+L W  CP+KTL     AE 
Sbjct: 546 FAGMHNLRYLKFYESKDIAHGGGKMQPYDGGLRFLPTALRYLHWYGCPVKTLPAYFGAEN 605

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYL 586
           LV L+MP ++V++LW  VQ L          +  + ID    + L ++PD  +  N+E +
Sbjct: 606 LVVLEMPESRVKKLWTGVQYL----------VNLKQIDLSWSEYLIKIPDLSKAINIERI 655

Query: 587 TVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            ++G T++ EL  S   L  ++ L LS   N+  IP SI     +  + +S+C +++  P
Sbjct: 656 NLQGCTSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSIGS-KVIRCVDLSYCLKVKRCP 714

Query: 646 EL----------------------------PCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
           E+                                  LS  NC  L  LP+ +    S+ Y
Sbjct: 715 EILSWKFLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLLSLPSSICKWKSLKY 774

Query: 678 VNLCNFLK-------LDPNELSEIVKDGW-----MKHSLYEERGIKKSMYFPGN---EIP 722
           + L N  K       L+P  L EI  +       + +S+Y  + + +S+Y  G    EIP
Sbjct: 775 LYLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYNLKYL-ESLYLKGTAIEEIP 833

Query: 723 KWFRHQSMGSSATL---KTRPPRPAGYNKL 749
               H +  +   L   K     P+G +KL
Sbjct: 834 SSIEHLTCLTVLDLSDCKNLERLPSGIDKL 863



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 26/144 (18%)

Query: 552 LPSSLCTFKT--------------------PITFEIID---CKMLERLPDELENLEYLT- 587
           LPSS+C +K+                    P+    ID   CK L+RLP+ + NL+YL  
Sbjct: 762 LPSSICKWKSLKYLYLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYNLKYLES 821

Query: 588 --VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             +KGT I E+P S+  L+ +  L LS+  NLER+P  I  L +L  +++  CE L++LP
Sbjct: 822 LYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSLP 881

Query: 646 ELPCNLGLLSARNCTSLEKLPAGL 669
           +LP +L  L   +C  LE +P GL
Sbjct: 882 DLPQSLLHLDVCSCKLLETIPCGL 905


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 281/741 (37%), Positives = 417/741 (56%), Gaps = 101/741 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR++FT+HL+  L  K I TFIDD +L RGD IS +L+  I+ S  +++
Sbjct: 46  YDVFLSFRGEDTRNSFTAHLYKELRTKGINTFIDDDKLERGDVISSALVAAIQNSKFSLV 105

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           + SE YASS W                      FY VDPSHVR+ +  FG   ++  +  
Sbjct: 106 VLSENYASSGWCLEELVKILECMRTMGQRVLPIFYDVDPSHVRQHNGKFGEALAKHEENL 165

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-DATFQSKNKGLVGV 156
           R  E++  W++ALT+ A+LSG+DS   + E  LI+ IA  +  +L   +    ++ LVG+
Sbjct: 166 RTMERVPIWRDALTQVANLSGWDSRN-KHEPMLIKGIATYIWNKLFSRSSNYADQNLVGI 224

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           E SI EI+SLL   S  V  + IWG+GGI K T+A AV+N+IS  FE   F  NV +  E
Sbjct: 225 ESSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFLENVSDYLE 284

Query: 217 TGGIKDLQKKLLSELSKDGNM--RNIESQLNRLARKKVRIVFDDVTS------------- 261
                 LQKK LS+L +D N+  +   S    L  KKV IV DDV +             
Sbjct: 285 KQDFLSLQKKYLSQLLEDENLNTKGCISIKALLCSKKVLIVIDDVNNSKILEDLIGKHGW 344

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITTR+KQ+L     N+ Y+ ++L   +A +LF ++AF   H    ++EL+  
Sbjct: 345 FGIGSRIIITTRNKQLLVTHGVNEVYQAEKLNDDNAVELFSRYAFKKAHPIDDYVELSQC 404

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YAQG+PLAL+VLG +L  +SK  WES + KL+ IP  EI++VL++S+D L+D+++++
Sbjct: 405 IVVYAQGLPLALRVLGSFLFDKSKRQWESQLDKLKKIPKKEIQDVLRVSFDGLEDNERDI 464

Query: 379 FLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACF +G  +D V+ IF +              KSLI++ +  ++ MH+LL+ MGRE
Sbjct: 465 FLDIACFFQGHDKDYVMEIFRSCGFFPDIGIRVLIEKSLISV-VENKLMMHNLLQKMGRE 523

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ S   PGKR+RLW H D+  VL K TGTE +EGISLD++ + +EI+  + AF+ M 
Sbjct: 524 IVREASPKEPGKRSRLWIHDDVNHVLTKKTGTEEVEGISLDLSSL-KEINFTNEAFAPMN 582

Query: 486 KLRFLRFY-------GDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVS 534
           +LR L+ Y         + KC V    G  F   E+RHL W + PLK+L  +   + LV 
Sbjct: 583 RLRLLKVYTLNFLMDSKREKCKVHFSRGFKFHCEELRHLYWYEYPLKSLPNDFNLKNLVD 642

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIR 594
           L MP ++++QLW   +                             LENL+++ +K +   
Sbjct: 643 LSMPYSQIKQLWKGTKV----------------------------LENLKFMNLKHSKFL 674

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
                  R++ ++RL+L    +L ++  S+  L+KL FL + +C+ L++LP   C+L  L
Sbjct: 675 TETPDFSRVTNLERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLKCL 734

Query: 655 SA---RNCTSLEKLPAGLSSM 672
                  C+  E+LP    ++
Sbjct: 735 EVFILSGCSKFEELPENFGNL 755



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 45/278 (16%)

Query: 598  ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
            +SLG LS ++ L LS N N   +P +I  L  L  L + +C+RLQ LPELP ++  + AR
Sbjct: 838  DSLGFLSSLEDLDLSEN-NFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSIMAR 896

Query: 658  NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
            NCTSLE +     S SS+L       ++L  +    I +DG +  +L        S    
Sbjct: 897  NCTSLETISN--QSFSSLLMT-----VRLKEHIYCPINRDGLLVPAL--------SAVVF 941

Query: 718  GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWD 777
            G+ IP W R+QS GS    +  PP     N  +  A C V V P  +          D+ 
Sbjct: 942  GSRIPDWIRYQSSGSEVKAEL-PPNWFDSN-FLGLALCVVTV-PRLVSL-------ADFF 991

Query: 778  GNVYAVCCDWKRKSEG-----HLYSWFLGKISYVESDHVFLGCNSFGGEYFGP-----NY 827
            G  +  C  +   S        +Y++       VESDH++L         + P     N+
Sbjct: 992  GLFWRSCTLFYSTSSHASSSFDVYTYPNHLKGKVESDHLWL--------VYVPLPHFINW 1043

Query: 828  DEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADH 865
             + +  I  SF    ++    +K+CGI  VY  +  ++
Sbjct: 1044 QQVT-HIKASFRITTFMRLNVIKECGIGLVYVNEELNY 1080


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 314/855 (36%), Positives = 445/855 (52%), Gaps = 164/855 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR+NF SHLH  LS KSI+TFIDD+L RGD I++SLL  IE S IA++I
Sbjct: 16  YDVFLSFRGEDTRNNFISHLHAALSRKSIRTFIDDELRRGDEITRSLLKKIEESKIAVVI 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHV-RKQSHSFGRHFSRLRKRF 99
           FS  YASS +                      F+ V+PS +    +  F    SR  K  
Sbjct: 76  FSRNYASSTYCLDELEKIIEFHECYGQTVIPIFFNVNPSDLLEPDTGIFAEALSRHEKDI 135

Query: 100 PEKM----------------------------------------KRWKNALTEAADLSGF 119
            EK+                                        +RWK AL +A +LSG 
Sbjct: 136 MEKLNKVQGWKKWWKDSVIKAANFLMLHSQVIGSEQDQEKLDKVQRWKVALKKAGNLSGH 195

Query: 120 DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRI 179
           D  +IR ES+L+++I +DV KR+     S +  LVGV+  IE I+SLL +G   V  L I
Sbjct: 196 DLQIIRRESELVDKIVSDVWKRVKQVSPSISDCLVGVDLQIERIKSLLLVGLSDVRVLGI 255

Query: 180 WGIGGISKITIAGAVFNKISRHFEGSYFALNV-REAEETGGIKDLQKKLLSELSKDG--- 235
           WG+GGI K T+AGAVF +I+  FEG  F  N+ +E+++ GG+  L ++LLS++ K+    
Sbjct: 256 WGMGGIGKTTLAGAVFKQIAFQFEGCCFLSNIGKESQKCGGLTRLGEELLSKVLKEREVK 315

Query: 236 -NMRNIESQ--LNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLK 276
            N  +I S      L   +V IV DDV                 SGSR+ +T+RDKQ+L 
Sbjct: 316 LNTPDIRSSHFKEMLRHNRVLIVLDDVNNIEQLEYFAGDPCWFGSGSRIFVTSRDKQLLS 375

Query: 277 NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCY 336
               +  Y +KEL Y DA  L C  AF         + LT   ++YA+G PLALKVLG  
Sbjct: 376 TT-VDVTYEVKELNYEDALHLVCWNAFKQKSPLEDFVALTHLVVRYARGNPLALKVLGSM 434

Query: 337 LCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVIS 396
           L G+SK  W SA++KL   PH +I+++LK +YD+LDD + ++FL IAC  E E RD V  
Sbjct: 435 LYGKSKTEWGSALKKLTRAPHKDIQDILKFTYDNLDDEELDIFLHIACLFESEDRDRVTQ 494

Query: 397 IFDAS--------KSLINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHH 444
             D           +L++  L      +++MHDLL++MGREIVR+ES   P +R+RLW+ 
Sbjct: 495 ALDGCGFSADIGISTLVDKSLLTISKNKLKMHDLLQEMGREIVRQES-KRPSERSRLWNP 553

Query: 445 KDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN------K 498
            DIY+VL++NTGTEAI GI L M++  R++ +N  AF+++  L+FL      N      +
Sbjct: 554 DDIYKVLEENTGTEAIVGILLGMSEA-RKLELNRNAFTRISNLKFLILRMSNNCGGFEEE 612

Query: 499 CMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS 554
           C V   EG+     ++R+L W   PLK L  N     L+ L  P +++E LW+   ++PS
Sbjct: 613 CKVQFPEGLESLPQQLRYLYWHGYPLKFLPANFHPTNLIELNFPYSRLEGLWEG-DKVPS 671

Query: 555 SL------------C-----TFKTPI------TFEIIDCKMLERLPDELENLEYLTVKGT 591
           S+            C     +F T I      T ++  C  L+  P+   N+ YL +  T
Sbjct: 672 SIGQLTKLTFMSLRCSKNIRSFPTTIDLQSLETLDLSGCSNLKIFPEVSRNIRYLYLNET 731

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----- 646
            I+E+P S+  LS +  L + N + LE IP +I  L  L  L +S C++L++ PE     
Sbjct: 732 AIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILSGCKKLESFPEILETT 791

Query: 647 ---------------LP---CN---LGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNF 683
                          LP   CN   L +L+  +C+ L KLP  + ++ S+  L    CN 
Sbjct: 792 NHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSKLGKLPKNMKNLKSLAELRAGGCNL 851

Query: 684 --LKLDPNELSEIVK 696
             L  D   LS IV+
Sbjct: 852 STLPADLKYLSSIVE 866



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 155/338 (45%), Gaps = 62/338 (18%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKR 608
            LP + C  K        DC  L +LP  ++NL+ L      G  +  LP  L  LS +  
Sbjct: 807  LPDTFCNLKALNMLNFSDCSKLGKLPKNMKNLKSLAELRAGGCNLSTLPADLKYLSSIVE 866

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
            L LS  SN + +P  I  LSKL ++ ++ C+RLQ+LPELP  +  L+AR+C SL  + +G
Sbjct: 867  LNLSG-SNFDTMPAGINQLSKLRWINVTGCKRLQSLPELPPRIRYLNARDCRSLVSI-SG 924

Query: 669  LSSMSSVLYVN--------LCNFLKLDPNELSEIVKDGWMK------------HSLYEER 708
            L  +  +   N          N  KLD +  ++I+    +K              LY+E 
Sbjct: 925  LKQLFELGCSNSLDDETFVFTNCFKLDQDNWADILASAQLKIQHFAMGRKHYDRELYDET 984

Query: 709  GIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF-PAFL-KY 766
             I     +PG EIP+WF  +S+GSS T++  PP    + + + F+ C VV F   FL +Y
Sbjct: 985  FI--CFTYPGTEIPEWFADKSIGSSVTIQHLPPDWLNH-RFLGFSVCLVVAFDDRFLCEY 1041

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPN 826
             R           V A  C+++    G              ++H+F   NS+  +YF P 
Sbjct: 1042 PR----------GVVACKCNFQNSYGGC-------------NNHIF-TLNSW--KYF-PA 1074

Query: 827  YDEFSFRIHCSFHFPPYLERG---EVKKCGIHFVYAQD 861
             D+      C       +E     EV+KCG+  +Y++D
Sbjct: 1075 MDQ--SMCSCGMIAVGMVENANFPEVEKCGVLLLYSKD 1110


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 291/822 (35%), Positives = 439/822 (53%), Gaps = 148/822 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT HLH  L  K IKTF DDQL RG+ IS +LL  IE S  +III
Sbjct: 23  YDVFLSFRGEDTRKSFTDHLHRELRRKWIKTFRDDQLRRGEQISPALLKAIEESRFSIII 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FS+ YASS W                      FY VDPSHVRKQ+ SF   F++    + 
Sbjct: 83  FSKNYASSSWCLDELTKILDCVEVMGHTAIPVFYNVDPSHVRKQTESFAEAFAKHDHIYG 142

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT A+ LSG+DS   R E+++I+E+   +  +L     S  +GLVG+ 
Sbjct: 143 DKSEKVLKWRKALTVASGLSGYDSR-DRHETEVIDEVVTMIFNKLIDASSSNMEGLVGMG 201

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF-EGSYFALNVREAEE 216
             ++++  LL IGS  V  + IWG+ GI K TIA  V+NKI   F EG  F  NVRE  +
Sbjct: 202 SRLQDMAQLLDIGSVDVRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREESQ 261

Query: 217 TGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT---------- 260
             G+  LQ++LLS++S  GN+      R I     RL  +KV IV DDV           
Sbjct: 262 RHGLAYLQEELLSQIS-GGNLNKGNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVLAG 320

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GSR+IITT+DK +L     +  Y ++ L Y +A KLFC  AF  D   A +++
Sbjct: 321 NHDWFGAGSRIIITTKDKTLLNMHGVDAIYNVEGLKYNEALKLFCWCAFKHDLPTADYMQ 380

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L    +KY +G+PLA+KVLG ++  ++ + W+SA+ KL+ IPH ++++VL+IS+D LDD+
Sbjct: 381 LCKNFVKYIEGLPLAIKVLGSFVKNKTIDEWKSALDKLKRIPHKDVQKVLRISFDGLDDN 440

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFY------------RIRMHDLLRDM 422
           QK++FLDIACF +G+ +D V  I ++       D+              ++ MHBLL++M
Sbjct: 441 QKDIFLDIACFFKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHBLLQEM 500

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+E++ +PGKR+RLW H ++  VL  NTGTEA+EG+ LD++  ++E+H ++ AF+
Sbjct: 501 GWEIVRQENVKYPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLS-ASKELHXSAGAFT 559

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAE------------------------------- 511
           +M +LR LRFY  K    + +L      +                               
Sbjct: 560 EMNRLRVLRFYNVKMNGSLEYLSEXELFDTTYHPWRWRAHEIQRADEMQTDCKLHLSGDL 619

Query: 512 ------VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD--------------- 548
                 +R L W + PLK+L  N   +KLV L M  +++E LW                 
Sbjct: 620 KFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSSRLEXLWKGDKSFEKLKFIKLSHS 679

Query: 549 --VQRLPS-----------------------SLCTFKTPITFEIIDCKMLERLPDE--LE 581
             + R P                        S+   +  I   +  CK L+       + 
Sbjct: 680 QYLTRTPDFSGAPNLERLILEGCKSMVKVHPSIGALQKLIFLNLXGCKNLKSFASSIHMN 739

Query: 582 NLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           +L+ LT+ G + +++ PE L  +  +++L+L + + L  +P SI  L+ L  L +++C++
Sbjct: 740 SLQILTLSGCSKLKKFPEMLENMKSLRQLLL-DETALRELPSSIGRLNGLVLLNLTNCKK 798

Query: 641 LQTLPELPC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
           L +LP+  C   +L +L+   C+ L+KLP  L S+  ++ +N
Sbjct: 799 LVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLN 840



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 159/406 (39%), Gaps = 118/406 (29%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELP----------- 597
            LP SLC   +     +  C  L++LPDEL +L     L   G+ I+E+P           
Sbjct: 802  LPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQV 861

Query: 598  -------------------------ESLGRLSWVKRLILSN------------------- 613
                                      SL  LS VK L LS+                   
Sbjct: 862  LSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLE 921

Query: 614  -----NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE--KLP 666
                  +N   IP S+  LS+L +L +SHC+ LQ++PELP  +  + A +C SLE   L 
Sbjct: 922  SLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETFSLS 981

Query: 667  AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-------------- 712
            A  S   + L     +  +L  NE S+ V  G +   +     I K              
Sbjct: 982  ACASRKLNQLNFTFSDCFRLVENEHSDTV--GAILQGIQLASSIPKFVDANKGSPVPYND 1039

Query: 713  -SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAVV----VFPAFLKY 766
              +  PG+ IP+WF HQ+MGSS T++  PP    YN KL+  A CAV     +   +L+Y
Sbjct: 1040 FHVIVPGSSIPEWFIHQNMGSSVTVEL-PPH--WYNAKLMGLAVCAVFHADPIDWGYLQY 1096

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGE----- 821
              ++ GE  +D                   S+ L   S ++ DHV+ G  S  G      
Sbjct: 1097 SLYR-GEHKYD-------------------SYMLQTWSPMKGDHVWFGYQSLVGXEDDRM 1136

Query: 822  YFG--PNYDEFSFRIHCSFHFPPYLE-RGEVKKCGIHFVYAQDSAD 864
            +FG      +  F  HC       ++    VKKCG+   Y Q   D
Sbjct: 1137 WFGERSGTXKILFSGHCIKSCJVCVQPEVVVKKCGVRLAYEQGDKD 1182



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 66/116 (56%), Gaps = 5/116 (4%)

Query: 570 CKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C  L++ P+ LEN   L  L +  T +RELP S+GRL+ +  L L+N   L  +P+S+  
Sbjct: 749 CSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCK 808

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           L+ L  L ++ C  L+ LP+   +L  L   N   + ++++P  ++ ++++  ++L
Sbjct: 809 LTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 864


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 312/871 (35%), Positives = 440/871 (50%), Gaps = 186/871 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRGEDTR NFT HLH  L    I  FIDDQL RG+ IS +LL  IE S  +III
Sbjct: 26  YEVFLSFRGEDTRKNFTDHLHEALRRNGIHAFIDDQLRRGEQISSALLRAIEESRFSIII 85

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YASS W                      FY VDPSHVRKQ+ S+G  F++  + + 
Sbjct: 86  FSEHYASSSWCLDELTKILECVKVGGHTAFPVFYNVDPSHVRKQTGSYGVAFTKHEQVYR 145

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT  + LSG+DS     ES+ I+EI + + K L+       + LVG++
Sbjct: 146 DNMEKVSKWREALTAVSGLSGWDSRN-EHESEFIKEIVSKIWKELNDASSCNMEALVGMD 204

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+++ SLL IGS+ V  + IWG+ GI K TIA AV+ KI   FEG  F  NVRE  + 
Sbjct: 205 SHIQKMFSLLRIGSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTQFEGCCFLSNVREKSQN 264

Query: 218 GGIKDLQKKLLSELSKDGNMRN---------IESQLNRLARKKVRIVFDDVT-------- 260
                +Q KLLS++ + GN+           IE  L+ +   +V IV DDV         
Sbjct: 265 NDPAVIQMKLLSQIFEKGNLNTGLLSGGINVIEKTLHSM---RVLIVLDDVDCPQQLEVL 321

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTR+K +L      + Y +KEL   +A KLF Q AF         
Sbjct: 322 AGNHNWFGPGSRIIITTREKHLLDE--KVEIYIVKELNKDEARKLFYQHAFKYKPPAGDF 379

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L D+A+ Y +G+PLALK+LG +L  RSK+ WES + KL  IP+ EI++VL+IS+D LD
Sbjct: 380 VQLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNNEIQDVLRISFDGLD 439

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D+QK++FLDIACF +G+ +D VI +  +              KSL+ +  + ++ MHDL+
Sbjct: 440 DNQKDIFLDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTIS-YNKLCMHDLI 498

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           + MG EIVR+ESI  PGKR+RLW + D+  +L  NTGTEA+EG+ L+++ + +E+H +  
Sbjct: 499 QKMGWEIVRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTL-KELHFSVN 557

Query: 480 AFSKMPKLRFLRFY-------------GDKNKCMVS----HLEG---VPFAEVRHLEWPQ 519
            F+KM KLR LRFY              D+ K   +    HL G        +R L W  
Sbjct: 558 VFTKMNKLRVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDG 617

Query: 520 CPLKTL--NICAEKLVSLKMPCTKVEQLWD------------------------------ 547
            PLK+L  N   EKL+ LKM  +++EQLW+                              
Sbjct: 618 YPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTPDFSGAPK 677

Query: 548 ----------DVQRLPSSLCTFKTPITFEIIDCKMLERLPDE--LENLEYLT-------- 587
                      + ++  S+   K  I   +  CK L+       LE+L+ LT        
Sbjct: 678 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLK 737

Query: 588 ----------------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
                           +KGT I+ LP S+  L+ +  L L    +LE +P  I  L  L 
Sbjct: 738 KFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCIFKLKSLK 797

Query: 632 FLFISHCERLQTLPELPCN--------------------------LGLLSARNCTSLEKL 665
            L +S+C RL+ LPE+  N                          L LL  +NC  L  L
Sbjct: 798 TLILSNCSRLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASL 857

Query: 666 PAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           P     ++S+  + L  C+ LK  P+++  +
Sbjct: 858 PESFCKLTSLQTLTLSGCSELKKLPDDMGSL 888



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 130/302 (43%), Gaps = 44/302 (14%)

Query: 580  LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +L+ L +    + E  LP  L  LSW++ L LS NS +  +P S+  L +L  L + H
Sbjct: 952  LHSLKKLNLSDCNLLEGALPSDLSSLSWLECLDLSRNSFIT-VP-SLSRLPRLERLILEH 1009

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM----SSVLYVNLCNFLKLDPNELSE 693
            C+ L++LPELP ++  L A +CTSLE +    S+     S  LY   CN  +L  NE S+
Sbjct: 1010 CKSLRSLPELPSSVEELLANDCTSLETISNPSSAYAWRNSGHLYSEFCNCFRLVENEQSD 1069

Query: 694  IVK-------------DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRP 740
             V+             +      +  +  I      PG+ IP+WF HQS   S T++  P
Sbjct: 1070 NVEAILRGIRLVASIPNSVAPSDIQRDLSIVYDAVVPGSSIPEWFTHQSERCSVTVEL-P 1128

Query: 741  PRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFL 800
            P      +L+  A C V         F    G   +  + Y     +     G       
Sbjct: 1129 PHWCN-TRLMGLAVCVV---------FHANIGMGKFGRSAY-----FSMNESGGFSLHNT 1173

Query: 801  GKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE-VKKCGIHFVYA 859
              + + ++DH++ G     G+ F  + D      H    F      GE VKKCG+  V+ 
Sbjct: 1174 VSMHFSKADHIWFGYRPLFGDVFSSSID------HLKVSFAGSNRAGEVVKKCGVRLVFE 1227

Query: 860  QD 861
            QD
Sbjct: 1228 QD 1229



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 28/227 (12%)

Query: 480 AFSKMPKLRFLRFYGDKN-KCMVS--HLEGVPF------AEVRHLEWPQCPLKTLNICAE 530
           +   + KL FL   G KN K  +S  HLE +        ++++     Q P+   +  + 
Sbjct: 695 SIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKFPEVQGPMDNFSELSL 754

Query: 531 KLVSLKMPCTKVEQL----------WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL 580
           K  ++K     +E L             ++ LPS +   K+  T  + +C  L++LP+  
Sbjct: 755 KGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCIFKLKSLKTLILSNCSRLKKLPEIG 814

Query: 581 ENLEYLT---VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
           EN+E L    +  T +RELP S+  L+ +  L L N   L  +PES   L+ L  L +S 
Sbjct: 815 ENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESFCKLTSLQTLTLSG 874

Query: 638 CERLQTLPE----LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           C  L+ LP+    L C L L +  N + ++++P  ++ ++ +  ++L
Sbjct: 875 CSELKKLPDDMGSLQCLLKLKA--NGSGIQEVPTSITLLTKLQVLSL 919


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1344

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 285/760 (37%), Positives = 430/760 (56%), Gaps = 91/760 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR+NFTSHL+    L  I+ FID++L +GD IS S+   I+   +++++
Sbjct: 44  YDVFISFRGEDTRNNFTSHLYAAFQLNKIQAFIDNRLHKGDEISPSIFKAIKHCNLSVVV 103

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YASS W                      FY++DPSHVRKQ+ ++G+ F +  +   
Sbjct: 104 LSKHYASSTWCLRELAEILDHKKRGGHIVIPVFYKIDPSHVRKQTGTYGKAFEKYERDVK 163

Query: 101 EKM---KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK-GLVGV 156
             M   ++WK ALTE A+L G++    R E++LIE I  DV+++L+  + ++ K  LVG+
Sbjct: 164 HNMAMLQKWKAALTEVANLVGWEFKNHRTENELIEGIVKDVMEKLNRIYPTEVKETLVGI 223

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           + +I  IESLL IGS+ V  + IWG+GG+ K TIA A+F K+S  +EGS F  NVRE  E
Sbjct: 224 DQNIAPIESLLRIGSKEVRIIGIWGMGGVGKTTIANALFTKLSSQYEGSCFLANVREEYE 283

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVT--------- 260
             G+  L+ KL SE+ +D    +I +        + RL +KKV IV DDV          
Sbjct: 284 NQGLGYLRNKLFSEVLEDDVNLHISTPKVRSTFVMRRLRQKKVLIVLDDVDDSKKLEYLA 343

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGS VI+TTRDK V+     ++ Y +K L    A +LF   AFG  + +    
Sbjct: 344 AQHDCLGSGSIVIVTTRDKHVISK-GVDETYEVKGLSLHHAVRLFSLNAFGKTYPEKGFE 402

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+ + + +A G PLALKVLG  L  R+++ W +A+RKL  +P+ EI+ VL+ SYD LD 
Sbjct: 403 MLSKQVVDHANGNPLALKVLGSLLHSRNEQQWANALRKLTKVPNAEIQNVLRWSYDGLDY 462

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
            QKN+FLDIACF  GE+ + VI + +               KSL+      ++ MHDL++
Sbjct: 463 EQKNMFLDIACFFRGENIENVIRLLEICGFYPYIGIKILQEKSLVTFSDDGKVCMHDLIQ 522

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG EIV +ESI  PG+R+RLW  K++Y VLK N GT+A+EGI LD+++++ ++ ++   
Sbjct: 523 EMGWEIVHRESIKDPGRRSRLWDPKEVYDVLKNNRGTDAVEGIILDVSQIS-DLPLSYET 581

Query: 481 FSKMPKLRFLRFYGDK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           FS+M  +RFL+FY  +    N  + S L+ +P  ++ +L+W   P K+L    C + LV 
Sbjct: 582 FSRMINIRFLKFYMGRGRTCNLLLPSGLKSLP-NKLMYLQWDGYPSKSLPSTFCTDNLVV 640

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
           L M  + VE+LWD ++       +F +     +   K L  LPD     NLE + V   T
Sbjct: 641 LSMMESHVEKLWDGIK-------SFASLKEINLRASKKLTNLPDLSLAPNLETIDVSHCT 693

Query: 592 TIRELPESLGRLSWVKRLILSN---NSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           ++  +P S   + +VK+L+L N     NL+ +P +I HLS L    +  C  L       
Sbjct: 694 SLLHVPLS---IQYVKKLLLFNLESCKNLKSLPINI-HLSSLEMFILRRCSSLDEFSVTS 749

Query: 649 CNLGLLSARNCTSLEKLPAGL-SSMSSVLYVNL--CNFLK 685
            N+  L  R  T+++  P  L   ++ ++Y+NL  C+ LK
Sbjct: 750 QNMTNLDLRE-TAIKDFPEYLWEHLNKLVYLNLESCSMLK 788



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 140/333 (42%), Gaps = 55/333 (16%)

Query: 565  FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE-- 622
            F ++  K    LP+    LE L++  + I  +P+S+  LS +++L +   + L  +PE  
Sbjct: 1004 FPLVKWKRFHSLPELPPFLEELSLSESNIECIPKSIKNLSHLRKLAIKKCTGLRYLPELP 1063

Query: 623  ------------------SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
                              SI+ L  L  + +  C++LQ LPELP  L    A +C SLE 
Sbjct: 1064 PYLKDLFVRGCDIESLPISIKDLVHLRKITLIECKKLQVLPELPPCLQSFCAADCRSLEI 1123

Query: 665  LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER-----GIKKSMYFPGN 719
            + +  + +    Y    N + LD N  + I+ D   + +    +     G   S+  PG 
Sbjct: 1124 VRSSKTVLIEDRYAYYYNCISLDQNSRNNIIADAPFEAAYTSLQQGTPLGPLISICLPGT 1183

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGN 779
            EIP WF +QS  SS  ++  P +    +K + FA C V+    FL        ++ ++G 
Sbjct: 1184 EIPDWFSYQSTNSSLDMEI-PQQWFKDSKFLGFALCLVI--GGFL--------QNSYEGY 1232

Query: 780  VYAVCCDWKRKS--EGHLYSWFLGKISYV-------ESDHVFLGC--NSFGGEY------ 822
               V C    KS         FLG  + V        SDH+F+ C   +F          
Sbjct: 1233 DPDVKCYHFVKSAFNSDPSVPFLGHCTTVMQVPQGFNSDHMFI-CYYPTFNASILQDFKD 1291

Query: 823  FGPNYDEFSFRIHCSFHFP-PYLERGEVKKCGI 854
             G  YD  S R+   F F  PY     VKKCG+
Sbjct: 1292 LGMYYDANSLRLRVIFKFKGPYQRLDIVKKCGV 1324



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIRELPES--LGRLS 604
            ++ LP+SL       T  +  CK L   PD  +LE+L  L   G +  E P +     LS
Sbjct: 830  IKELPTSLWRNNKLFTLVLHSCKKLVNFPDRPKLEDLP-LIFNGVSSSESPNTDEPWTLS 888

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             +  L L   S++E +P SI+ L  L  L ++ C++L++LP LP +L  LS    + +E 
Sbjct: 889  SLADLSL-KGSSIENLPVSIKDLPSLKKLTLTECKKLRSLPSLPPSLEDLSLDE-SDIEC 946

Query: 665  LPAGLSSMSSVLYVNLCNFLKL-DPNELSEIVKDGWMKHS-----LYEERGIKKSMYFPG 718
            L   +  +S +  + L N+ KL  P +L    K   +  S     L   +G+     FP 
Sbjct: 947  LSLSIKDLSHLKILTLTNYKKLMSPQDLPSSSKASLLNESKVDSHLVSMKGLSHLQKFP- 1005

Query: 719  NEIPKWFRHQSM 730
              + KW R  S+
Sbjct: 1006 --LVKWKRFHSL 1015


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 291/747 (38%), Positives = 423/747 (56%), Gaps = 74/747 (9%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+H L  K I TFIDD +L RG+ IS +L+  IE S  +II
Sbjct: 25  YDVFLSFRGEDTRNNFTAHLYHALCQKGIYTFIDDDKLERGEVISSALVEAIENSMFSII 84

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY VDP+ VRKQ   FG   ++ +K  
Sbjct: 85  VLSENYASSRWCLEELVKILECKENKGQTVLPIFYHVDPADVRKQRGKFGEALAKHKKNM 144

Query: 100 P--EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E++K WK+ALT+ A LSG+DS   + E  LI+E+A ++  +L +T  S  + LVG++
Sbjct: 145 ENMERVKIWKDALTKVAYLSGWDSQN-KNELLLIKEVAENIWNKLLSTLTSDTEDLVGID 203

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+E+E+LLC+ ++ V  + IWG+GGI K T+A A++ KIS  FE   F  +V +    
Sbjct: 204 SHIQEVETLLCLEADDVRMVGIWGMGGIGKTTLARAIYKKISDKFEDRCFLDDVADLARK 263

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLN-RLARKKVRIVFDDVTS--------------- 261
           G  +DL+K LLS + +D N+      L  RL  KKV IV D+V +               
Sbjct: 264 G--QDLKKLLLSNVLRDKNIDVTAPSLKARLHFKKVLIVIDNVNNREILENLVGGPNWFG 321

Query: 262 -GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
             SR+IITTRD  +L     N  Y +++L    A KLF  +AF  D      IEL D  I
Sbjct: 322 PKSRIIITTRDTHLLAAYGVNDVYEVQKLQDEKATKLFNHYAFRNDTPSRDVIELIDHVI 381

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YAQG+PLALKVLG  LC +SK+ W   + KL+ IP++EI+ VL+ S+D LD  Q+N+FL
Sbjct: 382 AYAQGLPLALKVLGSSLCKKSKDEWLCELNKLQKIPNMEIQNVLQTSFDELDYYQQNLFL 441

Query: 381 DIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMGREIVR 428
           DIA    GE +D VI I ++         ++LI+  L      ++ +HDLL +MG+EIVR
Sbjct: 442 DIAFVFWGELKDFVIDILNSCGFFPISGIRTLIDKSLISYIDDQLHIHDLLIEMGKEIVR 501

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           +     PGKR+RLW  +DI  VL+  TGTE +E I LD++ + +EI   + AF+KM KLR
Sbjct: 502 QTFPEEPGKRSRLWMQQDICHVLENLTGTEKVEVIDLDLHGL-KEIRFTTAAFAKMTKLR 560

Query: 489 FLRFYGDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
            L+    + +C V   +   F   E+R+L W   PLK L  +  ++ LV L+MP + + Q
Sbjct: 561 VLQIDAAQMQCEVHISDDFKFHYDELRYLFWDYYPLKLLPSDFKSKNLVCLRMPNSHLTQ 620

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLG 601
           LW+  +        F++    ++ D K L   PD   + NLE L + G T + ++  SLG
Sbjct: 621 LWEGNK-------VFESLKYMDLSDSKYLTETPDFSRVTNLECLILDGCTQLCKIHLSLG 673

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNC 659
            L  +  L L N  NL+  P  I  L  L  L +S C +L+  P++  ++  LS    + 
Sbjct: 674 TLDKLTLLSLENCINLKHFP-GICQLVSLKTLILSGCPKLEKFPDIAQHMPCLSKLYLDG 732

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKL 686
           T++ +LP+ ++  + ++ ++L N  KL
Sbjct: 733 TAITELPSSIAYATELVLLDLKNCRKL 759



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 149/376 (39%), Gaps = 94/376 (25%)

Query: 554  SSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            S L + KT I   +  C  LE+ PD    +  L  L + GT I ELP S+   S+   L+
Sbjct: 845  SQLVSVKTLI---LSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSI---SYATELV 898

Query: 611  L-------------------------------------SNNSNLERIPESIRHLSKLTFL 633
            L                                      N+ NL+ +P ++  L  L  L
Sbjct: 899  LLDLKNCRKLWSLPSSICQLTLLETLSLSGCSDLGKCEVNSGNLDALPRTLDQLRNLWRL 958

Query: 634  FISHCERLQTLPELPCNLGLLSARNCTSLEKLP--AGLSSMSSVLYVNLCNFLKL----- 686
             + +C+ L+ LP LP +L  ++A NC SLE +   +  S +   ++ N     K      
Sbjct: 959  ELQNCKSLRALPVLPSSLEFINASNCESLEDISPQSVFSQLRRSMFGNCFKLTKFQSRME 1018

Query: 687  -DPNELSEIVKDGWMKHSLYEERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPR 742
             D   ++  V     + +  E+  +   ++   FPG+ IP WF H+S G    ++     
Sbjct: 1019 RDLQSMAAHVDQKKWRSTFEEQSPVVHVLFSTVFPGSGIPDWFAHRSEGHEINIQVSQNW 1078

Query: 743  PAGYNKLISFAFCAVV------VFPAFLKYFRHKSG--EDDWDGN---VYAVCCDWKRKS 791
             + Y   + FAF AVV      +   ++ Y   + G    +   N    ++   DW  + 
Sbjct: 1079 YSSY--FLGFAFSAVVAPEKEPLTSGWITYCDLRCGAFNSELKSNGIFSFSFVDDWTEQL 1136

Query: 792  EGHLYSWFLGKISYVESDHVFLG-CNSFGGEYFGP---NYDEFSFRIHCSFHFPPYLERG 847
            E H+          + SDH++L    SF G  F P   +  +FSFR           E  
Sbjct: 1137 E-HI---------TIASDHMWLAYVPSFLG--FSPEKWSCIKFSFRTD--------KESC 1176

Query: 848  EVKKCGIHFVYAQDSA 863
             VK+CG+  VY + S 
Sbjct: 1177 IVKRCGVCPVYIRSST 1192



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 38/157 (24%)

Query: 556 LCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILS 612
           +C   +  T  +  C  LE+ PD    +  L  L + GT I ELP S+   + +  L L 
Sbjct: 695 ICQLVSLKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSIAYATELVLLDLK 754

Query: 613 N----------------------------------NSNLERIPESIRHLSKLTFLFISHC 638
           N                                  + NL+ +P ++  L  L  L + +C
Sbjct: 755 NCRKLWSLPSSICQLTLLKTLSLSGCSDLGKCEVNSGNLDALPRTLDKLCNLWRLELQNC 814

Query: 639 ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
             L+ LP LP +L +++ARNC SLE      S + SV
Sbjct: 815 RSLRALPALPSSLAIINARNCESLED-AGAFSQLVSV 850



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
           ++  LP +L         E+ +C+ L  LP    +L  +  +     E   +  +L  VK
Sbjct: 792 NLDALPRTLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESLEDAGAFSQLVSVK 851

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNCTS 661
            LILS    LE+ P+  +H+  L+ L++        + ELP ++       LL  +NC  
Sbjct: 852 TLILSGCPKLEKFPDIAQHMPCLSKLYLDG----TAITELPSSISYATELVLLDLKNCRK 907

Query: 662 LEKLPAGL 669
           L  LP+ +
Sbjct: 908 LWSLPSSI 915


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 296/804 (36%), Positives = 440/804 (54%), Gaps = 125/804 (15%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           DVF+SFRGEDTR NFTSHLH  L    +KT+ID  L +GD IS++L+  I+ S ++I++F
Sbjct: 18  DVFISFRGEDTRSNFTSHLHAALCRTKVKTYIDYNLKKGDYISETLVKAIQDSYVSIVVF 77

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHS----FGRHFSRLRK 97
           SE YASS W                      FY VDPSHVRKQS S    F +H   L  
Sbjct: 78  SENYASSTWCLDELTHMMKCLKNNQIVVVPVFYNVDPSHVRKQSGSYMVAFEKHVCNLNH 137

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
               K+  W+ AL +A  L+G+DS     ES+L+E+I  DVL++L   + S++KGLVG++
Sbjct: 138 F--NKVNDWREALAQATSLAGWDSRKYMLESELVEDIVQDVLQKLHCKYPSESKGLVGID 195

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
                +ES + IGS+ V  + +WG+GGI K TIA A+F+  S  FEG  F  N+ +  E 
Sbjct: 196 KHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDESER 255

Query: 218 GGIKDLQKKLLSELSKD------GNMR-NIESQLNRLARKKVRIVFDDVTS--------- 261
            G+  L  KLL+ L ++      G +R       +RL+ KKV IV DDV +         
Sbjct: 256 HGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFLVG 315

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+T RDK  L    A++ Y +K L + ++ +LF   AF     D  + +
Sbjct: 316 AHTCLGPGSRVIVTARDKHALIE-RAHEIYEVKPLNFHESLQLFSLSAFKKVCPDIGYQQ 374

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  + YA G+PLALKVLG     +SKE+W+S M KL+ IP  EI+ +L++SYD LDD+
Sbjct: 375 LSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDGLDDT 434

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +K +FLDIACFL G+ R  V  + DA              K+LI      +++MH L+++
Sbjct: 435 EKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALIQE 494

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGREIVR+ES   PG+R+RL+ H+++Y VLK N GT AIEGISLD++++ ++++++S  F
Sbjct: 495 MGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQI-KDMNLSSDIF 553

Query: 482 SKMPKLRFLRFYG-DKNKCMVSHLEGV-PFA-EVRHLEWPQCPLKTL--NICAEKLVSLK 536
            KM  LRFL+FY     +C VS   G+  F+ ++R+L W   PLK+L  +   EKLV L 
Sbjct: 554 VKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVELY 613

Query: 537 MPCTKVEQLWDDVQRLP----------------------------------------SSL 556
           MP ++V++LW+ VQ L                                         +S+
Sbjct: 614 MPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHVHASI 673

Query: 557 CTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSN 613
            + +  +   ++ CK L+ L     L +L  L + G ++++E   +   ++++     + 
Sbjct: 674 LSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCTAI 733

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLP-ELPC--NLGLLSARNCTSLEK-----L 665
           N     +P S+++L +L  L +S C RL+ LP E  C  +LG L   +CT L+      L
Sbjct: 734 N----ELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLL 789

Query: 666 PAGLSSMSSVLYVNLCNFLKLDPN 689
             GL S+  +   N CN  +L  N
Sbjct: 790 FDGLRSLGYLCLDNCCNLTELPHN 813



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 60/340 (17%)

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAE 530
           R +H +  +  K+  L  +       K + S L   P   +R LE   C  LK  ++ +E
Sbjct: 667 RHVHASILSLQKLVNLNLVWC-----KNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSE 721

Query: 531 KLVSLKMPCTKVEQLWDDVQ-----------------RLPSSLCTFKTPITFEIIDCKML 573
           ++  L + CT + +L   V+                  LP+     K+     + DC +L
Sbjct: 722 EMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLL 781

Query: 574 ER-----LPDELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
           +      L D L +L YL +     + ELP ++  LS     +  + SN++ IP+SI+HL
Sbjct: 782 DTSNLHLLFDGLRSLGYLCLDNCCNLTELPHNISLLS-SLYYLSLSGSNVKNIPKSIKHL 840

Query: 628 SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL---PAGLSSMSS-VLYVNLCNF 683
           S+L  L +  C  +Q LPELP ++ +L   NCTSLE +   PA    +    ++++  N 
Sbjct: 841 SQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKNC 900

Query: 684 LKLDPNELSEIVKDGW--MKHSLYEERGIK-----------------------KSMYFPG 718
           ++L+    + I+ D    +K + Y +   K                        ++  PG
Sbjct: 901 VELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICPG 960

Query: 719 NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           + +P WF ++S  +S T++         N +  F FC ++
Sbjct: 961 SRVPDWFHYRSTEASITIELSVSHSPQSN-IFGFIFCLIL 999


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 296/804 (36%), Positives = 440/804 (54%), Gaps = 125/804 (15%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           DVF+SFRGEDTR NFTSHLH  L    +KT+ID  L +GD IS++L+  I+ S ++I++F
Sbjct: 18  DVFISFRGEDTRSNFTSHLHAALCRTKVKTYIDYNLKKGDYISETLVKAIQDSYVSIVVF 77

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHS----FGRHFSRLRK 97
           SE YASS W                      FY VDPSHVRKQS S    F +H   L  
Sbjct: 78  SENYASSTWCLDELTHMMKCLKNNQIVVVPVFYNVDPSHVRKQSGSYMVAFEKHVCNLNH 137

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
               K+  W+ AL +A  L+G+DS     ES+L+E+I  DVL++L   + S++KGLVG++
Sbjct: 138 F--NKVNDWREALAQATSLAGWDSRKYMLESELVEDIVQDVLQKLHCKYPSESKGLVGID 195

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
                +ES + IGS+ V  + +WG+GGI K TIA A+F+  S  FEG  F  N+ +  E 
Sbjct: 196 KHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDESER 255

Query: 218 GGIKDLQKKLLSELSKD------GNMR-NIESQLNRLARKKVRIVFDDVTS--------- 261
            G+  L  KLL+ L ++      G +R       +RL+ KKV IV DDV +         
Sbjct: 256 HGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFLVG 315

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+T RDK  L    A++ Y +K L + ++ +LF   AF     D  + +
Sbjct: 316 AHTCLGPGSRVIVTARDKHALIE-RAHEIYEVKPLNFHESLQLFSLSAFKKVCPDIGYQQ 374

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  + YA G+PLALKVLG     +SKE+W+S M KL+ IP  EI+ +L++SYD LDD+
Sbjct: 375 LSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDGLDDT 434

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +K +FLDIACFL G+ R  V  + DA              K+LI      +++MH L+++
Sbjct: 435 EKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALIQE 494

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGREIVR+ES   PG+R+RL+ H+++Y VLK N GT AIEGISLD++++ ++++++S  F
Sbjct: 495 MGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQI-KDMNLSSDIF 553

Query: 482 SKMPKLRFLRFYG-DKNKCMVSHLEGV-PFA-EVRHLEWPQCPLKTL--NICAEKLVSLK 536
            KM  LRFL+FY     +C VS   G+  F+ ++R+L W   PLK+L  +   EKLV L 
Sbjct: 554 VKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVELY 613

Query: 537 MPCTKVEQLWDDVQRLP----------------------------------------SSL 556
           MP ++V++LW+ VQ L                                         +S+
Sbjct: 614 MPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHVHASI 673

Query: 557 CTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSN 613
            + +  +   ++ CK L+ L     L +L  L + G ++++E   +   ++++     + 
Sbjct: 674 LSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCTAI 733

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLP-ELPC--NLGLLSARNCTSLEK-----L 665
           N     +P S+++L +L  L +S C RL+ LP E  C  +LG L   +CT L+      L
Sbjct: 734 N----ELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLL 789

Query: 666 PAGLSSMSSVLYVNLCNFLKLDPN 689
             GL S+  +   N CN  +L  N
Sbjct: 790 FDGLRSLGYLCLDNCCNLTELPHN 813



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 189/456 (41%), Gaps = 86/456 (18%)

Query: 472  REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAE 530
            R +H +  +  K+  L  +       K + S L   P   +R LE   C  LK  ++ +E
Sbjct: 667  RHVHASILSLQKLVNLNLVWC-----KNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSE 721

Query: 531  KLVSLKMPCTKVEQLWDDVQ-----------------RLPSSLCTFKTPITFEIIDCKML 573
            ++  L + CT + +L   V+                  LP+     K+     + DC +L
Sbjct: 722  EMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLL 781

Query: 574  ER-----LPDELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            +      L D L +L YL +     + ELP ++  LS     +  + SN++ IP+SI+HL
Sbjct: 782  DTSNLHLLFDGLRSLGYLCLDNCCNLTELPHNISLLS-SLYYLSLSGSNVKNIPKSIKHL 840

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL---PAGLSSMSS-VLYVNLCNF 683
            S+L  L +  C  +Q LPELP ++ +L   NCTSLE +   PA    +    ++++  N 
Sbjct: 841  SQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKNC 900

Query: 684  LKLDPNELSEIVKDGW--MKHSLYEERGIK-----------------------KSMYFPG 718
            ++L+    + I+ D    +K + Y +   K                        ++  PG
Sbjct: 901  VELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICPG 960

Query: 719  NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFL---KYFRHKSG--- 772
            + +P WF ++S  +S T++         N +  F FC  ++ P  L   K    K G   
Sbjct: 961  SRVPDWFHYRSTEASITIELSVSHSPQSN-IFGFIFC--LILPQSLPNEKNLNWKIGCEC 1017

Query: 773  --EDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEF 830
              E   +    ++C         H+Y W+       + +  F   N+ G      +Y  +
Sbjct: 1018 YMEGGENIRNTSMCSFATGLVSDHVYLWY-------DENFCFDMFNTTGKSRTNDDYSAY 1070

Query: 831  SFRIHCSFHFPPYLERGE-----VKKCGIHFVYAQD 861
              ++  SF F  ++E  +     +K+CGI  +Y  +
Sbjct: 1071 KPKL--SFQF--FVETEDKMNVVIKECGICQIYGSE 1102


>gi|147858727|emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 295/779 (37%), Positives = 407/779 (52%), Gaps = 139/779 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YD FLSFRGEDTR NFT+HLH  L  K I TF D+ L+RG+ IS  LL  IE S  +III
Sbjct: 22  YDAFLSFRGEDTRKNFTTHLHAALCQKGINTFKDNLLLRGEKISAGLLQAIEESRFSIII 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ   F   F+   + + 
Sbjct: 82  FSENYASSSWCLDELTKILECVEEGGHTALPVFYNVDPSHVRKQKGCFADAFAEHEQVYR 141

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           EKM++   W+ ALTE A +SG+DS   R ES++IEEI   +L      F S    LVG++
Sbjct: 142 EKMEKVVKWRKALTEVATISGWDSRD-RDESEVIEEIVTRILNEPIDAFSSNVDALVGMD 200

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E++ SLLCIGS  V  + IWG+ GI K TIA A++++I   F+G  F  +VRE  + 
Sbjct: 201 SRMEDLLSLLCIGSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDSQR 260

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVT------------- 260
            G+  LQ+ LLS +   G + N+   +N    RL  KKV IV D+V              
Sbjct: 261 HGLTYLQETLLSRVL--GGINNLNRGINFIKARLHSKKVLIVLDNVVHRQELEALVGSHD 318

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTR+K++L     +  Y +++L Y +A KLFCQ+AF   H     ++L  
Sbjct: 319 WFGPGSRIIITTREKRLLIEQEMDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCH 378

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
            A+ Y   +PLALKVLG  L  +S   W+S + K    P+ E+  VLK S+D LDD++KN
Sbjct: 379 HAVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKFNQFPNKEVLNVLKTSFDGLDDNEKN 438

Query: 378 VFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDLLRDMGREI 426
           +FLDIA F +GE +D VI + D             KSLI +    ++ MHDLL++MG EI
Sbjct: 439 MFLDIAFFYKGEDKDFVIEVLDNFFPVSEIGNLVDKSLITIS-DNKLYMHDLLQEMGWEI 497

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR+ESI  PGKR+RL  H+DI+ VL  N GTEA+EG+  D++  ++E++++  AF+KM K
Sbjct: 498 VRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLS-ASKELNLSVDAFAKMNK 556

Query: 487 LRFLRFYG---------------------------------DKNKCMVSHLEGVPFAEVR 513
           LR LRFY                                  + +K  +S     P   +R
Sbjct: 557 LRLLRFYNCQFYGSSEYLSEKELIASTHDARRWMGYDNSPYNDSKLHLSRDFKFPSNNLR 616

Query: 514 HLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD------------------------ 547
            L W   PLK+L  N   EKLV L M  + ++QLW+                        
Sbjct: 617 SLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPD 676

Query: 548 ----------------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLT 587
                            + +L  S+   K  I   +  C  LE+ P+     LE+L  ++
Sbjct: 677 FSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGIS 736

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           ++GT IRELP S+G L+ +  L L N   L  +P+SI  L  L  L +S C +L+ LP+
Sbjct: 737 LEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPD 795



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 111/249 (44%), Gaps = 35/249 (14%)

Query: 635  ISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV---LYVNLCNFLKLDPNEL 691
            + HC+ L++LPELP ++  L+A +CTSLE L    S+ +S    L  N  N  +L  N+ 
Sbjct: 919  LEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNCFRLGENQG 978

Query: 692  SEIVKDGWMKHSLY---------EERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTR 739
            S+IV+       L          +ERG+ +  Y    PG+ IPKWF HQS+GS   ++  
Sbjct: 979  SDIVETILEGTQLASSMAKLLEPDERGLLQHGYQALVPGSRIPKWFTHQSVGSKVIVEL- 1037

Query: 740  PPRPAGYN-KLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSW 798
            PP    YN K +  A C V  F   +  +R       +    YA   D       H   W
Sbjct: 1038 PPH--WYNTKWMGLAACVVFNFKGAVDGYRGTFPLACFLNGRYATLSD-------HNSLW 1088

Query: 799  FLGKISYVESDHVFLGCNSFG--GEYFGPNYDEFSFRIHCSFHF----PPYLERGEVKKC 852
                 S +ESDH +    S       + P   E S  +  SF F          GEVKKC
Sbjct: 1089 ---TSSIIESDHTWFAYISRAELEARYPPWTGELSDYMLASFLFLVPEGAVTSHGEVKKC 1145

Query: 853  GIHFVYAQD 861
            G+  VY +D
Sbjct: 1146 GVRLVYEED 1154


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 292/759 (38%), Positives = 413/759 (54%), Gaps = 89/759 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+  L  K I  FID D+L  G+ IS +LL  IE S  +I+
Sbjct: 10  YDVFLSFRGEDTRNNFTAHLYDALHCKGINAFIDADKLRIGEIISPALLSAIEGSRFSIV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY+VDPS VRKQ  S+G+ F++  +  
Sbjct: 70  VLSENYASSRWCLEELVKILECKKTKGQVVLPIFYQVDPSDVRKQKGSYGKAFAKHEENM 129

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVG 155
            E M++   W+ AL+E  ++SG DS   + ES LI+EI + +L  L +T  S  +  LVG
Sbjct: 130 KENMEKVHIWREALSEVGNISGRDSRN-KDESVLIKEIVSMLLNELLSTPSSDAEDQLVG 188

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   I E+E LLC  S  V  + IWG+GGI K T+A A++N++S  FEG  +  +  E  
Sbjct: 189 IGSQIREMELLLCTESTDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDAGEDL 248

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDV-------------- 259
              G+  LQ+KLLS++    N++     S   RL  ++V IV D+V              
Sbjct: 249 RKRGLIGLQEKLLSQILGHENIKLNGPISLKARLCSREVFIVLDNVYDQDILECLVGSHD 308

Query: 260 --TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRDK++L +      Y +K+LV+ +A +   ++A     +    +EL++
Sbjct: 309 WFGQGSRIIITTRDKRLLMSHGVRVVYEVKKLVHTEAIEFLGRYASKQQIVIDEFMELSN 368

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             I YAQG+PL LKVLG +L   SK  W S + KL+  PH  I+EVL+ISYD LDD +KN
Sbjct: 369 SIITYAQGLPLVLKVLGSFLFSMSKHEWRSELDKLKDTPHGRIQEVLRISYDGLDDKEKN 428

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACF +GE +D VI I D               KSLI +    +I MHDLL++MGR
Sbjct: 429 IFLDIACFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQEMGR 488

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           +I+R+ S   PGKR+RLW +KD Y VL KNTGT+ +EGI  +++ +  EIH  + AF+ M
Sbjct: 489 KIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDI-EEIHFTTKAFAGM 547

Query: 485 PKLRFLRFYG----------DKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAE 530
            KLR L+FY            K KC V       F   E+R+L     PL+ L  +   +
Sbjct: 548 DKLRLLKFYDYSPSTNSECTSKRKCKVHIPRDFKFHYNELRYLHLHGYPLEQLPHDFSPK 607

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITF-EIIDCKMLERLPD--ELENLEYLT 587
            LV L + C+ V+QLW  ++ L          + F ++   K L   P+   + NLE L 
Sbjct: 608 NLVDLSLSCSDVKQLWKGIKVL--------DKLKFMDLSHSKYLVETPNFSGISNLEKLD 659

Query: 588 VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           + G T +RE+  +LG L  +  L L +   L+ IP SI  L  L     S C +++  PE
Sbjct: 660 LTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPE 719

Query: 647 LPCNLGLLSA--RNCTSLEKLPAGLSSMS--SVLYVNLC 681
              NL  L     + T++  LP+ +  +    VL  N C
Sbjct: 720 NFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGC 758



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 159/369 (43%), Gaps = 64/369 (17%)

Query: 541  KVEQLWDD---VQRLPSSLCTFKTPITFEIIDCK------MLERLPDELEN--------- 582
            ++++L+ D   +  LPSS+C  +         CK       L  LP +  N         
Sbjct: 726  QLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKFLLSPL 785

Query: 583  -----LEYLTVKGTTIRELPE--SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
                 L+ L ++   I E  +   L  LS ++ L LS N N   +P S+  LS+L  L +
Sbjct: 786  SGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGN-NFISLPSSMSQLSQLVSLKL 844

Query: 636  SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP--NELSE 693
             +C RLQ L ELP ++  + A NC SLE + +  S   S+ +V+    LK+    N +  
Sbjct: 845  QNCRRLQALSELPSSIKEIDAHNCMSLETI-SNRSLFPSLRHVSFGECLKIKTYQNNIGS 903

Query: 694  IVKD-----GWMKHSLY-----EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            +++         K S Y     E   I+ S   PG+EIP WF +QS G+   ++  PP  
Sbjct: 904  MLQALATFLQTHKRSRYARDNPESVTIEFSTVVPGSEIPDWFSYQSSGNVVNIEL-PPNW 962

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYS----WF 799
               N  + FA  AV  F     Y        + +  V+ + C +  ++    Y      +
Sbjct: 963  FNSN-FLGFALSAVFGFDPLPDY--------NPNHKVFCLFCIFSFQNSAASYRDNVFHY 1013

Query: 800  LGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFR--IHCSFHFPPYLERGEVKKCGIHFV 857
                + +ESDH++LG        + P    F +    H    F  Y     VK+CGIH V
Sbjct: 1014 NSGPALIESDHLWLG--------YAPVVSSFKWHEVNHFKAAFQIYGRHFVVKRCGIHLV 1065

Query: 858  Y-AQDSADH 865
            Y ++D +D+
Sbjct: 1066 YSSEDVSDN 1074


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 297/798 (37%), Positives = 425/798 (53%), Gaps = 126/798 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRGEDTR +FT HLH  L    I TFIDDQ  RG+ IS +LL  IE S  +II+
Sbjct: 21  YEVFLSFRGEDTRKSFTDHLHSALCQYGINTFIDDQFRRGEQISSALLRAIEESRFSIIV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YASS W                      FY VDPSHVRKQ+ S+G  F++  + + 
Sbjct: 81  FSEHYASSSWCLDELTKILECVKVGGHTAFPVFYNVDPSHVRKQTGSYGVAFTKHEQVYR 140

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT A+ LSG+DS   R ESK+I+EI + +   L+         LVG++
Sbjct: 141 DNMEKVLKWREALTVASGLSGWDSRD-RHESKVIKEIISKIWNELNDASSCNMDALVGMD 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+ + SLLCIGS+ V  + IWG+ GI K TIA  V+ KI   FEG  F  NVRE    
Sbjct: 200 SHIQNMVSLLCIGSDDVQMVGIWGMAGIGKSTIAKVVYQKIRTQFEGYCFLSNVREKSLK 259

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS---------- 261
               D+Q +LLS++  +GN+      R I +  N L   KV +V DDV            
Sbjct: 260 NDPADMQMELLSQIFWEGNLNTRIFNRGINAIKNTLHSMKVLVVLDDVDCPQQLEVLAGN 319

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GS++IITTR+K +L      + Y +KEL  ++AH LFCQ AF         ++L
Sbjct: 320 HNWFGLGSQIIITTREKNLLDE--KTEIYEVKELNNSEAHMLFCQHAFKYKPPTEDFVQL 377

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            D A+ Y +G+PLALK+LGC L  RSK+ WES + KL+ IP+  I++VL+IS+D LD++Q
Sbjct: 378 CDCALNYTKGIPLALKILGCSLYNRSKKEWESELEKLKRIPNKAIQDVLRISFDGLDNNQ 437

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           K++FLDIACF +G+ +D    I  +              KSL+ +  + ++ MHDL+++M
Sbjct: 438 KDIFLDIACFFKGQDKDYTTKIQKSCDFFPEIGIRNLIDKSLVTIS-YNKLCMHDLIQEM 496

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+ESI  PGKR+RLW  +D+  +L  N GTEA+EGI LD++ + +E+H +   F+
Sbjct: 497 GWEIVRQESIKDPGKRSRLWVTEDVIHMLTTNIGTEAVEGIVLDLSAL-KELHFSVDVFT 555

Query: 483 KMPKLRFLRF--------------YGDKNKCMVS------HLEG---VPFAEVRHLEWPQ 519
           KM +LR LRF               G+ + C         HL G        ++ L W  
Sbjct: 556 KMNRLRVLRFCNAQICEIWDYAWKRGNYDSCKNQYPKCKLHLYGDFKFLSNNLKSLHWDG 615

Query: 520 CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
            P K+L      EKLV LKM  +++EQLW+  +       +F+     ++   + L + P
Sbjct: 616 YPSKSLPSTFHPEKLVELKMSFSRLEQLWEGNK-------SFQKLKFIKLSHSQHLIKTP 668

Query: 578 D--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
           D     NL  + + G T++ ++  S+G L  +  L L    NL+    SI H+  L  L 
Sbjct: 669 DFSGAPNLRRIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSI-HMESLQILN 727

Query: 635 ISHCERLQTLPELPC---NLGLLSARN-----------------------CTSLEKLPAG 668
           ++ C +L+  PE+     NL  LS +                        C SLE LP+ 
Sbjct: 728 LAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSC 787

Query: 669 LSSMSSVLYVNLCNFLKL 686
           +  + S+  + L N L+L
Sbjct: 788 IFKLKSLKTLILSNCLRL 805



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 152/371 (40%), Gaps = 78/371 (21%)

Query: 540  TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK-----------MLERLPDE--------- 579
             K+E     +Q +P+S+          +  CK            L   P E         
Sbjct: 961  VKLESNGSGIQEVPTSITLLTNLQVLSLTGCKGGESKSRNLALSLRSSPTEGFRLSSLTA 1020

Query: 580  LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +L+ L +    + E  LP  L  LSW++RL LS NS +  +P S+  L +L  L + H
Sbjct: 1021 LYSLKELNLSDCNLLEGALPSDLSSLSWLERLDLSINSFI-TVP-SLSRLPQLERLILEH 1078

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV--------NLCNFLKLDPN 689
            C+ LQ+LPELP ++  L A +CTSLE     +S +SS   +          CN  +L  N
Sbjct: 1079 CKSLQSLPELPSSIIELLANDCTSLE----NISYLSSGFVLRKFCDFNFEFCNCFRLMEN 1134

Query: 690  ELSEIVK----------------DGWMKHSL--YEERGIKKSMYFPGNEIPKWFRHQSMG 731
            E S+ ++                D     SL  +  R I      PG+ IP+WF  QS+G
Sbjct: 1135 EQSDTLEAILLAIRRFASVTKFMDPMDYSSLRTFASR-IPYDAVVPGSSIPEWFTDQSVG 1193

Query: 732  SSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKS 791
             S T++  P       +LI  A CA V  P   K    K G   +     +V       +
Sbjct: 1194 CSVTVELPPHWYT--TRLIGLAVCA-VFHPNISK---GKFGRSAYFSMNESVGFSIDNTA 1247

Query: 792  EGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE-VK 850
              H          + +++H++ G  S  G  F  + D      H    F   +  GE VK
Sbjct: 1248 SMH----------FSKAEHIWFGYRSLFGVVFSRSID------HLEVSFSESIRAGEVVK 1291

Query: 851  KCGIHFVYAQD 861
            KCG+  ++ QD
Sbjct: 1292 KCGVRLIFEQD 1302



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 5/130 (3%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LPS +   K+  T  + +C  L++LP+  EN+E L    +  T +RELP S+  L+ 
Sbjct: 781 LESLPSCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNE 840

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLE 663
           +  L + N   L  +PESI  L  L  L IS+C RL+ LPE+  N+  L     + T L 
Sbjct: 841 LVLLQMKNCKKLASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLR 900

Query: 664 KLPAGLSSMS 673
           +LP+ +  ++
Sbjct: 901 ELPSSIEHLN 910



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 9/136 (6%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKR 608
           LP S+   K+  T  I +C  L++LP+  EN+E L    +  T +RELP S+  L+ +  
Sbjct: 855 LPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNGLVL 914

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCTSLEK 664
           L L N   L  +PESI  L+ L  L +S C  L+ LP+    L C + L S  N + +++
Sbjct: 915 LKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLES--NGSGIQE 972

Query: 665 LPAGLSSMSSVLYVNL 680
           +P  ++ ++++  ++L
Sbjct: 973 VPTSITLLTNLQVLSL 988



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 29/146 (19%)

Query: 570 CKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C  L++ P+    + NL  L++KGT I+ LP S+  L+ +  L L    +LE +P  I  
Sbjct: 731 CSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFK 790

Query: 627 LSKLTFLFISHCERLQTLPELPCN--------------------------LGLLSARNCT 660
           L  L  L +S+C RL+ LPE+  N                          L LL  +NC 
Sbjct: 791 LKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCK 850

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKL 686
            L  LP  +  + S+  + + N L+L
Sbjct: 851 KLASLPESIFKLKSLKTLTISNCLRL 876


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 297/819 (36%), Positives = 438/819 (53%), Gaps = 147/819 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT+HLH  LS K I TF D  L RG+ IS +LL  IE S  +II+
Sbjct: 21  YDVFLSFRGEDTRQSFTAHLHSALSQKGINTFKDSLLPRGEKISPALLQAIEESRFSIIV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS W                      F+ VDPS+VRKQ  SF + F++  + + 
Sbjct: 81  LSENYASSSWCLEELTKILECVEEGGHTALPVFHNVDPSNVRKQEGSFAKAFAKHEQVYK 140

Query: 101 EKMK---RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           +KM+   +W++ALTEAA ++G+D+   R ES++IE+I   +L      F S    LVG++
Sbjct: 141 DKMEQVVKWRDALTEAATIAGWDTRN-RDESEVIEQIVTRILNEPIDAFSSNMDALVGMD 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E++ S LCIGS+ V  + IWG+ GI K TIA A++++I   F+G  F  NVRE  + 
Sbjct: 200 SRMEDLLSRLCIGSDDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKNVREDSQR 259

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVT------------- 260
            G+  LQ+ LLS++   G + N+   +N    RL  K+V IV DDV              
Sbjct: 260 HGLTYLQETLLSQVL--GGINNLNRGINFIKARLRPKRVLIVLDDVVHRQQLEALAGNHD 317

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
              SGSR+IITTR+K++L     ++ Y++++L Y +A KLFCQ+AF   H     ++L  
Sbjct: 318 WFGSGSRIIITTREKRLLIEQEVDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCH 377

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
            A+ Y  G+PLALKVLG  L  +S   W+S + KL   P+ E+  VLK S+D LDD++KN
Sbjct: 378 HAVDYTGGLPLALKVLGSCLYRKSIHEWKSELDKLNQFPNKEVLNVLKTSFDGLDDNEKN 437

Query: 378 VFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDLLRDMGREI 426
           +FLDIA F +GE +D VI + D             KSLI +    ++ MHDLL++MG EI
Sbjct: 438 MFLDIAFFYKGEDKDFVIEVLDNFFPVSEIGNLVDKSLITIS-DNKLYMHDLLQEMGWEI 496

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR+ESI  PGKR+RL  H+DI+ VL  N GTEA+EG+  D++  ++E++++  AF+KM K
Sbjct: 497 VRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLS-ASKELNLSVDAFAKMNK 555

Query: 487 LRFLRFYG---------------------------------DKNKCMVSHLEGVPFAEVR 513
           LR LRFY                                  + +K  +S     P   +R
Sbjct: 556 LRLLRFYNCQFYGSSEYLSEEELIASTRDAWRWMGYDNSPYNDSKLHLSRDFKFPSNNLR 615

Query: 514 HLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWD------------------------ 547
            L W   PLK+L      +KLV L M  + ++QLW+                        
Sbjct: 616 SLHWHGYPLKSLPSIFHPKKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPD 675

Query: 548 ----------------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLT 587
                            + +L  S+   K  I   +  C  LE+ P+     LE+L  ++
Sbjct: 676 FSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGIS 735

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           ++GT IRELP S+G L+ +  L L N   L  +P+SI  L  L  L +S C +L+ LP+ 
Sbjct: 736 LEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPD- 794

Query: 648 PCNLGLLSAR-----NCTSLEKLPAGLSSMSSVLYVNLC 681
             +LG L        + T ++++P+ ++ ++++  ++L 
Sbjct: 795 --DLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLA 831



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 41/168 (24%)

Query: 620  IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
            IP ++  LS+L  L + +C+ LQ+LPELP ++  L+A  CTSLE      S+ +S  Y  
Sbjct: 905  IPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGG 964

Query: 680  L----CNFLKLDPNELSEIVK------------------------DGWMKHSLYEERGIK 711
            L     N  +L  NE ++ VK                        DG   H+LY+     
Sbjct: 965  LRLEFSNCFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDG--PHNLYD----- 1017

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAVV 758
                 PG+ IP+WF  QS GSS T++     P  YN KL+  A CAV+
Sbjct: 1018 --AIVPGSRIPEWFVDQSTGSSVTVEL---PPHWYNTKLMGMAVCAVI 1060


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 279/740 (37%), Positives = 402/740 (54%), Gaps = 88/740 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG+DTRDNFTSHL+  L  K IKTFID+ L RG+ I+ +LL TIE S I++I+
Sbjct: 12  FDVFLSFRGKDTRDNFTSHLYDALCRKKIKTFIDNGLERGEEITPALLRTIEESLISVIV 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPS V +Q+ SF      L K F 
Sbjct: 72  FSENYASSPWCLDEMVKILECRETHGQAVLPVFYHVDPSDVEEQNGSFALTLVELEKNFK 131

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ +W+  L +AA +SG+DS  I  E+KL++ I   +L++L+    +  KGL+G++  I
Sbjct: 132 DKVSKWRTDLMKAASISGWDSRAIGSEAKLVKHIVEHILQKLNKASSTDLKGLIGLDSHI 191

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
            +I+ LL IG   +  + +WG+ GI K TIAGA+FN +S  FEG  F  N++E  E  G+
Sbjct: 192 RKIKKLLQIGLPDIRTVGLWGMSGIGKTTIAGAIFNTLSSQFEGCCFLENIKEESERCGL 251

Query: 221 KDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVTS------------- 261
             L+ KLLSE+  +GN+      +      NRL  KKV +V DDV               
Sbjct: 252 VPLRDKLLSEILMEGNVHIATPSIGSTSLKNRLRHKKVLLVLDDVNDVDQIETLIGRCDF 311

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSRV++T+RDKQVLKN   ++ Y ++ L   +A +LF   AF  +      I+L+ + 
Sbjct: 312 GLGSRVLVTSRDKQVLKNV-VDEIYEVEGLSDDEALQLFNLHAFKDNCSTTDKIKLSYRV 370

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           +K+AQG PLALKVLG  L  RSK+ WESA+ KLE  P  +I  VL+ S+D+LDD +K++F
Sbjct: 371 VKHAQGNPLALKVLGSSLFARSKQDWESALEKLERTPQPKIFHVLRSSFDALDDEEKSIF 430

Query: 380 LDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREI 426
           LDIACF +G+    V  I +             A K L+++    ++ MHDLL++M +EI
Sbjct: 431 LDIACFFKGQQIGFVKKILNGCGLSAGIGISVLAGKCLVSIQE-NKLEMHDLLQEMAQEI 489

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           V +ESI   GKR+RLW   D  QVL KN GTE +EGI  D  K+   + ++S A      
Sbjct: 490 VHQESIKELGKRSRLWSPSDACQVLTKNLGTERVEGIFFDTYKMG-AVDLSSRA------ 542

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
             F+R  G  N C V+  +G+ F   E+R+L     PL  +  N  AE LV L +  + +
Sbjct: 543 --FVRIVG--NNCKVNLPQGLDFLSDELRYLHGDGYPLSYMPSNFQAENLVQLTLAYSSI 598

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGR 602
           +QLW  VQ + S               C  +   P    +++ L + GT I E+P S+  
Sbjct: 599 KQLWTGVQLILSG--------------CSSITEFPHVSWDIKKLFLDGTAIEEIPSSIKY 644

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS--ARNCT 660
              +  L L N     R+P +I     L  L +S C    + PE+   +G L     + T
Sbjct: 645 FPELVELSLQNCKRFLRLPRTIWKFKLLQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGT 704

Query: 661 SLEKLPAGLSSMSSVLYVNL 680
            +  LP+ + ++  +L + L
Sbjct: 705 GISNLPSPMRNLPGLLSLEL 724



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 136/345 (39%), Gaps = 48/345 (13%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERL-----------PDELENLEYL---TVKGTTIR 594
            +  LPS +      ++ E+  CK L  L           P  +  ++YL    + G  + 
Sbjct: 706  ISNLPSPMRNLPGLLSLELRSCKNLYGLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLL 765

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            E+P  +  L  ++ L LS N   E IP SI  L +L +L +  C++L +LP+LP  L  L
Sbjct: 766  EVPYCIDCLPSLESLDLSRNL-FEEIPVSINKLFELQYLGLRDCKKLISLPDLPPRLTKL 824

Query: 655  SARNCTSLEKL---PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
             A  C SL+     P G+   +   +   C+ L LD  E  +I+     K  +Y ER   
Sbjct: 825  DAHKCCSLKSASLDPTGIEGNNFEFFFTNCHSLDLD--ERRKIIAYALTKFQVYSERLHH 882

Query: 712  KSMYFPGNE----IPKWFRH-QSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKY 766
            +  Y    E    IP W R     G+S T++     P+ +       F  V       + 
Sbjct: 883  QMSYLLAGESSLWIPSWVRRFHHKGASTTVQL----PSNWADSDFLGFELVTSIAVDCRI 938

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRKSE------GHLYSWFLGKIS--YVESDHVFLG---- 814
             +     D      + V C +  K+E        LY ++ G     ++  +H  +G    
Sbjct: 939  CKCNGDHD------FQVKCRYHFKNEYIYDGGDDLYCYYGGWYGRRFLNGEHTLVGYDPC 992

Query: 815  CNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYA 859
             N    + FG NY E     +        LE   V+ C +H +Y 
Sbjct: 993  VNVTKEDRFG-NYSEVVIEFYPVEMNDHPLECIRVRACEVHLLYT 1036


>gi|356522934|ref|XP_003530097.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1031

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 296/774 (38%), Positives = 426/774 (55%), Gaps = 102/774 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YD F++FRG+DTR +F SHLH  L   ++ T+ID ++ +G  I   +   I+ S + ++I
Sbjct: 23  YDAFITFRGDDTRSDFASHLHAALRRNNVDTYIDYRIEKGAKIWLEIERAIKDSTLFLVI 82

Query: 62  FSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR- 98
           FSE YASS W                       FY++DPS VRKQS ++   F++ +K  
Sbjct: 83  FSENYASSSWCLNELLQLMQCKKQEENVHVIPVFYKIDPSQVRKQSENYHVAFAKHKKDG 142

Query: 99  --FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               EKM++WK+AL+EAA+LSGF SN  R E  LIE+I   VL++LD  + +  +G    
Sbjct: 143 KVSEEKMQKWKDALSEAANLSGFHSNTYRTEPDLIEDIIKVVLQKLDHKYPNDFRGPFIS 202

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             +   IES L I S+ V  + IWG+GGI K T+A A+F+K+S H+EG+ F  NV E  +
Sbjct: 203 NENYTNIESFLNINSKEVRIIGIWGMGGIGKTTLAAAIFHKVSSHYEGTCFLENVAEESK 262

Query: 217 TGGIKDLQKKLLSELSKDG----NMRNIESQLNR-LARKKVRIVFDDVT----------- 260
              +  +  KLLS+L ++      ++ I S + R L RKKV IV DDV            
Sbjct: 263 RHDLNYVCNKLLSQLLREDLHIDTLKVIPSIVTRKLKRKKVFIVLDDVNTSELLEKLVGV 322

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSR+I+TTRDK VL     +K + +K++ + ++ +LF   AFG  + +  + E
Sbjct: 323 GREWLGSGSRIIVTTRDKHVLIREVVDKIHEVKKMNFQNSLELFSLNAFGKTYPEKGYEE 382

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ +A+ YA+G+PLALKVLG +L  RS+  W SA+ KL+  P+V+I+ VL++SY  LDD 
Sbjct: 383 LSKRAMDYAKGIPLALKVLGSFLRSRSENEWHSALSKLKKSPNVKIQAVLRLSYAGLDDD 442

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           +KN+FLDIACFL+G+ RD V  I +               K+LI       I MHDL+++
Sbjct: 443 EKNIFLDIACFLKGQSRDHVTKILNDCDFSADIGIRSLLDKALITTTYSNCIDMHDLIQE 502

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGRE+VR+ES+  PG+R+RLW   +IY VL  N GT A+EGI LDM ++   I+++S  F
Sbjct: 503 MGREVVREESVKFPGQRSRLWDPVEIYDVLTNNRGTAAVEGIWLDMTQITH-INLSSKVF 561

Query: 482 SKMPKLRFLRF---YGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICAEKLV 533
            KMP LR L F    GD  +    +L +G+ F    +R+L W   PL++L      EKLV
Sbjct: 562 RKMPNLRLLTFKSHNGDSERINSVYLPKGLEFLPKNLRYLGWNGYPLESLPSRFFPEKLV 621

Query: 534 SLKMPCTKVEQLWDDVQRLPS----SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
            L MP + VE+LW  VQ LP+     LC  K      +++C  L   P    NL+Y+   
Sbjct: 622 ELSMPYSNVEKLWQGVQNLPNLERIELCGSK-----HLVECPRLSHAP----NLKYVNSI 672

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
                    S  R S +  L           PES ++L +L  L I  CE L+ +P LP 
Sbjct: 673 SLLSSLKCLSF-RYSAIISL-----------PESFKYLPRLKLLEIGKCEMLRHIPALPR 720

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL-----KLDPNELSEIVKDG 698
           ++ L    NC SL+ +   LSS +       C FL     KLD +    I+KD 
Sbjct: 721 SIQLFYVWNCQSLQTV---LSSSAESSKRPNCTFLVPNCIKLDEHSYDAILKDA 771


>gi|359495270|ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 286/804 (35%), Positives = 424/804 (52%), Gaps = 124/804 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+H L  K I TFIDD +L RG  IS +L+  IE S  +I+
Sbjct: 15  YDVFLSFRGEDTRNNFTAHLYHALCQKGINTFIDDDKLERGQVISPALVAAIENSMFSIV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YA SRW                      FY VDPS VR+Q   FG   ++  +  
Sbjct: 75  VLSKNYAFSRWCLQELVKIVECMKSRRQRVVPIFYNVDPSDVRRQRGIFGEALAKHEENS 134

Query: 100 P--EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E+++ WK+ALT+ A+LSG+DS   + E  LI+EI  D+L +L +T  S  + LVG++
Sbjct: 135 ENMERVQSWKDALTQVANLSGWDSRN-KNEPLLIKEIVTDILNKLLSTSISDTENLVGID 193

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++EIE  LC+GS+    + IWG+GGI K T+A A++ KI+  FE   F  NV E    
Sbjct: 194 ARMQEIEMRLCLGSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENVGEDLAK 253

Query: 218 GGIKDLQKKLLSELSKDGN--MRNIESQLNRLARKKVRIVFDDVTS-------------- 261
            G+  LQ+K L++L ++ N  M+ + S   RL  KKV IV D+V                
Sbjct: 254 EGLIGLQQKFLAQLLEEPNLNMKALTSIKGRLHSKKVLIVLDNVNDPIILKCLVGNYDWF 313

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSR+IITTRDK++L +      Y  +   Y +A +    ++          +E++ + 
Sbjct: 314 GRGSRIIITTRDKRLLISHGVLNYYEAQRFNYDEASEFLTPYSLKHKIPCDDFMEVSKEV 373

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YAQG+PLAL+VLG +L   +KE W + + KL+  P+++I+EVLK+SYD LDD +KN+ 
Sbjct: 374 IGYAQGLPLALEVLGSFLFSMTKEEWRNQLDKLKSTPNMKIQEVLKVSYDGLDDKEKNIL 433

Query: 380 LDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREI 426
           LDIACF +GE +D V+ I D               KSL+ +     I MHDL+++MGREI
Sbjct: 434 LDIACFFKGEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEIMMHDLIQEMGREI 493

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR++S+  PGKR+RLW H+DI  VLKKNT TE IEGI L+++ +   ++  + A + M +
Sbjct: 494 VRQQSLEEPGKRSRLWFHEDINGVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALAGMNR 553

Query: 487 LRFLRFYGDKN------------KCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAE 530
           LR L+ Y  KN             C V+  +   F   ++R L +    LK+L  +   +
Sbjct: 554 LRLLKVYNSKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKSLPNDFNPK 613

Query: 531 KLVSLKMPCTKVEQLWDDVQRLP------------------------------------- 553
            LV L MP ++++QLW  ++ L                                      
Sbjct: 614 NLVELSMPYSRIKQLWKGIKVLANLKFMDLSHSKYLIETPNFRGVTNLKRLVLEGCVSLR 673

Query: 554 ---SSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWV 606
              SSL   K  I   + +C+ML+ LP    +L++LE   + G +  +E PE+ G L  +
Sbjct: 674 KVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEML 733

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP 666
           K L  ++   +  +P S   L  L  L    C+   +       L LL  R+  S+  + 
Sbjct: 734 KEL-YADEIAIGVLPSSFSFLRNLQILSFKGCKGPSS------TLWLLPRRSSNSIGSIL 786

Query: 667 AGLSSMSSVLYVNLCNF-LKLDPN 689
             LS + S++ +NL N  L  +PN
Sbjct: 787 QPLSGLRSLIRLNLSNCNLSDEPN 810



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 153/419 (36%), Gaps = 134/419 (31%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE--------------------------LEN 582
            ++ LPSS C  K+  TF +  C   +  P+                           L N
Sbjct: 696  LKSLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRN 755

Query: 583  LEYLTVKG-----TTIRELP----ESLGR----LSWVKRLILSNNSNLE----------- 618
            L+ L+ KG     +T+  LP     S+G     LS ++ LI  N SN             
Sbjct: 756  LQILSFKGCKGPSSTLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLG 815

Query: 619  ----------------RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
                             +P +I  LS LT L + +C+RLQ LPELP ++  + A NCTSL
Sbjct: 816  FLSSLEELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSL 875

Query: 663  EK---------LPAGL---------------------SSMSSVLYVNLCNFLKLDPNELS 692
            +          LP G                      +S   +   +  ++ ++DP    
Sbjct: 876  KDVSYQVLKSLLPTGQHQKRKFMVPVVKPDTALAVLEASNPGIRIPHRASYQRIDP---- 931

Query: 693  EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
             +VK G    +L          + PG+ IP W R+QS GS    +  PP     N  + F
Sbjct: 932  -VVKLGIATVAL--------KAFIPGSRIPDWIRYQSSGSEVKAEL-PPNWFNSN-FLGF 980

Query: 753  AFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGK-ISY---VES 808
            AF + V    F   F  K+           V  DW  + +       + + IS+   +E+
Sbjct: 981  AF-SFVTCGHFSCLFMLKAD----------VLFDWTSRDDSSSVDIIIVEMISFKRRLET 1029

Query: 809  DHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG--EVKKCGIHFVYAQDSADH 865
            DHV L           P     S   H    F      G  E+K+CG+  VY+ +  +H
Sbjct: 1030 DHVCLCYVPL------PQLRNCSQVTHIKVSFMAVSREGEIEIKRCGVGVVYSNEDGNH 1082


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 295/804 (36%), Positives = 432/804 (53%), Gaps = 139/804 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRGEDTR +FT HLH  L    I  FIDD+L RG+ IS +LL  IE S  +III
Sbjct: 21  YEVFLSFRGEDTRKSFTDHLHKALRRCGIHAFIDDRLRRGEQISSALLRAIEESRFSIII 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ  S+G  F++  + + 
Sbjct: 81  FSEHYASSSWCLDELTKILQCVKEGRHTAFPVFYNVDPSHVRKQEGSYGVAFTKHEQVYR 140

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           + M++   W+ ALT A++LSG+DS   + ES++I+EI + + K+L+       + LVG+ 
Sbjct: 141 DNMEKVVEWRKALTVASNLSGWDSRD-KHESEVIKEIVSKIWKKLNDASSCNMEALVGMA 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+ + SLL IGS+ V  + IWG+ GI K TIA AV+ KI   FEG  F  NVRE  + 
Sbjct: 200 SHIQNMVSLLRIGSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTRFEGCCFLSNVREKSQK 259

Query: 218 GGIKDLQKKLLSELSKDGNMRN---------IESQLNRLARKKVRIVFDDV--------- 259
                +Q +LLS++ ++GN+           IE  L+ +   +V IV DDV         
Sbjct: 260 NDPAVIQMELLSQIFEEGNLNTGVLSGGINVIEKTLHSM---RVLIVLDDVDCPQQLEVL 316

Query: 260 -------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                  + GSR+IITTR+K +L      + Y  KEL   +A KLF Q AF         
Sbjct: 317 AGNHNWFSPGSRIIITTREKHLLDE--KVEIYVAKELNKDEARKLFYQHAFKYKPPVGDF 374

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L D+A+ Y +G+PLALK+LG +L  RSK+ WES + KL  IP+ EI++VL+IS+D LD
Sbjct: 375 VQLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLD 434

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D+QK++FLDIACF +G+ +D VI +  +              KSL+ +  + ++ MHDL+
Sbjct: 435 DNQKDIFLDIACFFKGQDKDYVIKLLKSCDFFPEIEIRNLIDKSLVTIS-YNKLCMHDLI 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MG EIVR+ESI  PGKR+RLW + D+  +L  NTGTEA+EG+ L+++ + +E+H +  
Sbjct: 494 QEMGWEIVRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTL-KELHFSVN 552

Query: 480 AFSKMPKLRFLRFY-------------GDKNKCMVS----HLEG---VPFAEVRHLEWPQ 519
            F+KM KLR LRFY              D+ K   +    HL G        +R L W  
Sbjct: 553 VFTKMNKLRVLRFYDAQIWGSSWIGRHNDRYKSPYTECKFHLSGDFKFLSNHLRSLHWDG 612

Query: 520 CPLKTL--NICAEKLVSLKMPCTKVEQLWD------------------------------ 547
            PLK+L  N   EKL+ LKM  +++EQLW+                              
Sbjct: 613 YPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTPDFSGAPK 672

Query: 548 ----------DVQRLPSSLCTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKGTT-IR 594
                      + ++  S+   K  I   +  CK L+       LE+L+ +T+ G + ++
Sbjct: 673 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFSSSIHLESLQTITLSGCSKLK 732

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           + PE  G +  +  L L   + ++ +P SI +L+ L+ L +  C+ L++LP     L  L
Sbjct: 733 KFPEVQGAMDNLPELSLKGTA-IKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLKSL 791

Query: 655 SA---RNCTSLEKLPAGLSSMSSV 675
                 NC+ L+KLP    +M S+
Sbjct: 792 KTLILSNCSRLKKLPEIQENMESL 815



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 133/305 (43%), Gaps = 54/305 (17%)

Query: 580  LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNS-----NLERIPESIRHLSKLTF 632
            L +L  L + G  + E  LP  L  LSW++ L LS NS     NL R+P       +L  
Sbjct: 947  LYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNSFITVPNLSRLP-------RLKR 999

Query: 633  LFISHCERLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSMSSVLYVNL--CNFLKLDP 688
            L + HC+ L++LPELP N+  L A +CTSLE    P+   +  +  ++N    N  +L  
Sbjct: 1000 LILEHCKSLRSLPELPSNIEKLLANDCTSLETFSNPSSAYAWRNSRHLNFQFYNCFRLVE 1059

Query: 689  NELSE----IVKDGWMKHSL-------YEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
            NE S+    I++   +  S+       YE +     +  PG+ IP+WF  QS+G S T++
Sbjct: 1060 NEQSDNVEAILRGIRLVASISNFVAPHYELKWYDAVV--PGSSIPEWFTDQSLGCSVTVE 1117

Query: 738  TRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYS 797
              PP      +L+  A C V         F    G   +  + Y     +     G    
Sbjct: 1118 L-PPHWC-TTRLMGLAVCFV---------FHPNIGMGKFGRSEY-----FSMNESGGFSL 1161

Query: 798  WFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE-VKKCGIHF 856
                   + ++DH++ G     GE F P+ D      H    F      GE VKKCG   
Sbjct: 1162 HNTASTHFSKADHIWFGYRPLYGEVFSPSID------HLKVSFAGSNRAGEVVKKCGARL 1215

Query: 857  VYAQD 861
            V+ QD
Sbjct: 1216 VFEQD 1220



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 9/139 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LP  +   K+  T  + +C  L++LP+  EN+E L    +  T +RELP S+  L+ 
Sbjct: 778 LESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNG 837

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCTS 661
           +  L L N   L  +PESI  L+ L  L +S C  L+ LP+    L C + L +  N T 
Sbjct: 838 LVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKA--NGTG 895

Query: 662 LEKLPAGLSSMSSVLYVNL 680
           ++++P  ++ ++ +  ++L
Sbjct: 896 IQEVPTSITLLTKLEVLSL 914


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 307/836 (36%), Positives = 442/836 (52%), Gaps = 146/836 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG+DTR+NFTSHL+  L  K IKTFIDD+L RG  I+ +LL TIE S I+++I
Sbjct: 13  YDVFLSFRGKDTRNNFTSHLYDALCRKKIKTFIDDRLERGGEITPALLKTIEESRISVVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY V+PS V +Q+ SFG  F+ L K F 
Sbjct: 73  FSKNYASSPWCVDELVKILECKETYGQIVLPVFYHVNPSDVDEQTGSFGNAFAELEKNFK 132

Query: 101 EKMK---RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            KM    RW+  LT AA +SG+DS V  PESKL+ ++   + KRL+    SK +GLVG +
Sbjct: 133 GKMDKVPRWRADLTNAASISGWDSQVTSPESKLVTDVVQTIWKRLNRASPSKLRGLVGAD 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             IE+I  LL I    V  + IWG+GGI K TIAGA ++  S  +EG +F  N+R+  E 
Sbjct: 193 SRIEQINKLLSIVPSDVRTIGIWGMGGIGKTTIAGAFYDSFSSQYEGHHFLPNIRQESEK 252

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL-----NRLARKKVRIVFDDVT------------ 260
           G + DL+ +LLS+L ++ N+R     +     +RL +KKV +V DDV             
Sbjct: 253 GRLNDLRDELLSKLLEEENLRVGTPHIPTFIRDRLCQKKVLLVLDDVNDVRQFQHLNEVP 312

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
              +GS V++T+RDKQVLKN   ++ Y + EL   +A +LF   AF G+H   +++EL+ 
Sbjct: 313 LIGAGSVVVVTSRDKQVLKNV-VDEIYEVGELNSHEALQLFSLNAFKGNHPPKAYMELSI 371

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQK 376
            AI YA+G PLAL+VLG +L  R +  WES + ++E  P + I ++L+I +D+L D++ K
Sbjct: 372 TAINYAKGNPLALRVLGSFLFNRERHFWESQLNEIESFPELNICDLLRIGFDALRDNNTK 431

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFY----------RIRMHDLLRDMGR 424
           ++FLDIACF  G   D V  I D    K+ I   +            ++ MHDLL++M  
Sbjct: 432 SIFLDIACFFRGHRVDFVKRILDGCGFKTDIGFSVLIDRCLIKISDDKVEMHDLLQEMAH 491

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN------------- 471
           E+VRKES     K++RLW+ KD YQVL  N GT  +EGI LD++K+              
Sbjct: 492 EVVRKESAYELRKQSRLWNPKDAYQVLTNNLGTGKVEGIFLDVSKIRTEKVEGMFLDVSE 551

Query: 472 -REIHMNSYAFSKMPKLRFLRFYGDK--NKCMV---SHLEGVPFAEVRHLEWPQCPLKTL 525
            REI ++S AF++M  LR L+ Y     +KC V   S LE +   E+R+L W   PL +L
Sbjct: 552 IREIELSSTAFARMYNLRLLKIYNSAAGDKCTVHLPSGLESLSH-ELRYLHWDGYPLTSL 610

Query: 526 --NICAEKLVSLKMPCTKVEQLWDDVQRL------------------------------- 552
             N   + LV L +  +KV+QLW   Q L                               
Sbjct: 611 PCNFRPQNLVELNLSSSKVKQLWRGDQNLGNLKDVNLSNCEHITFLPDLSKARNLERLNL 670

Query: 553 ---------PSSLCTFKTPITFEIIDCKMLERLPDELEN--------------------- 582
                    PSS+      +  ++  CK L  LP  + +                     
Sbjct: 671 QFCKSLVKFPSSIQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNLSGCANLKKCPETA 730

Query: 583 --LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
             L YL +  T + ELP+S+G LS +  L L N   +  +PE+I  L  L  + IS C  
Sbjct: 731 GKLTYLNLNETAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDISGCSS 790

Query: 641 LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           +   P+   N+  L   N T++E+LP+ +  +  ++Y++L  CN LK  P+ +S++
Sbjct: 791 ISRFPDFSWNIRYLYL-NGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKL 845



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 163/351 (46%), Gaps = 61/351 (17%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLE------------RLPDELENLEYLTVKGTTIREL 596
            + +LPS +   K     E+ +CK LE            R   +L+ L  L + G ++ E+
Sbjct: 950  ITKLPSPIGNLKGLACLEVGNCKYLEDIHCFVGLQLSKRHRVDLDCLRKLNLDGCSLSEV 1009

Query: 597  PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
            P+SLG LS ++ L LS N NL  IP SI  L +L +L + +C+RLQ+LPELP  L  L  
Sbjct: 1010 PDSLGLLSSLEVLDLSGN-NLRTIPISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDV 1068

Query: 657  RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL---SEIVKDGWMKHSLYEERGIKK- 712
             NC SL  L   +S  S+V+  N+  F+  +   L   ++I++   +K  LY +R   + 
Sbjct: 1069 DNCQSLNYL---VSRSSTVVEGNIFEFIFTNCLRLPVVNQILEYSLLKFQLYTKRLYHQL 1125

Query: 713  --------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF- 763
                    S   PG+  P+WF HQS GS AT +         ++ + F+ CAV+ F +  
Sbjct: 1126 PDVPEGACSFCLPGDVTPEWFSHQSWGSIATFQLSSHWVN--SEFLGFSLCAVIAFRSIS 1183

Query: 764  -------LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG-- 814
                     +FR++ G D  D   Y             LY W+  K   ++S H+F+G  
Sbjct: 1184 HSLQVKCTYHFRNEHG-DSHDRYCY-------------LYGWYDEK--RIDSAHIFVGFD 1227

Query: 815  -CNSFGGEYFGPNYDEFSFRIHC---SFHFPPYLERGEVKKCGIHFVYAQD 861
             C     +Y    Y E S        + +  P ++  +V +CG+  +Y  +
Sbjct: 1228 PCLVAKEDYMFSEYSEVSIEFQVEDMNGNLLP-IDLCQVHECGVRVLYEDE 1277



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 23/161 (14%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           V  LP ++   K+ +  +I  C  + R PD   N+ YL + GT I ELP S+G L  +  
Sbjct: 767 VLNLPENIYLLKSLLIVDISGCSSISRFPDFSWNIRYLYLNGTAIEELPSSIGGLRELIY 826

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP-----------------ELP--- 648
           L L   + L+ +P ++  L  L  L +S C  +   P                 E+P   
Sbjct: 827 LDLVGCNRLKNLPSAVSKLGCLEKLDLSGCSSITEFPKVSRNIRELYLDGTAIREIPSSI 886

Query: 649 ---CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
              C L  L  RNC   E LP+ +  +  +  +NL   L+ 
Sbjct: 887 ECLCELNELHLRNCKQFEILPSSICKLKKLRRLNLSGCLQF 927



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 16/147 (10%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           ++ LPS++         ++  C  +   P    N+  L + GT IRE+P S+  L  +  
Sbjct: 835 LKNLPSAVSKLGCLEKLDLSGCSSITEFPKVSRNIRELYLDGTAIREIPSSIECLCELNE 894

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC--------T 660
           L L N    E +P SI  L KL  L +S C + +  PE      +L    C        T
Sbjct: 895 LHLRNCKQFEILPSSICKLKKLRRLNLSGCLQFRDFPE------VLEPMVCLRYLYLEQT 948

Query: 661 SLEKLPAGLSSMSSV--LYVNLCNFLK 685
            + KLP+ + ++  +  L V  C +L+
Sbjct: 949 RITKLPSPIGNLKGLACLEVGNCKYLE 975


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 349/1021 (34%), Positives = 513/1021 (50%), Gaps = 184/1021 (18%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
            YDVFLSFRG DTR N  SHL+  LS K + TFIDD  L RG+ IS +LL  IE S I++I
Sbjct: 16   YDVFLSFRGADTRHNLISHLYAALSRKHVTTFIDDHGLDRGEEISPTLLKAIEESKISVI 75

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            IFSE YASS+W                      FY VDPS VRKQ+ SFG+ F  ++++F
Sbjct: 76   IFSENYASSKWCLDELVKIMECMKTMSRNVLPVFYHVDPSDVRKQTGSFGQAFGVVKEKF 135

Query: 100  P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
                ++++RW  ALTEAA+LSG+DSN  R ES+LIE + ++++K+L ATF S +  LVG+
Sbjct: 136  KGSMDRVQRWSTALTEAANLSGWDSNNYRLESELIEGVIDEIIKKLYATFYSISTDLVGI 195

Query: 157  ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
            +  IE+I  LLCIGS  V  + IWG+GGI K TIA A+F++IS  F G  F  NVRE   
Sbjct: 196  DSHIEQILLLLCIGSLDVRFIGIWGMGGIGKTTIAEAIFSRISDQFAGCCFLSNVREKSS 255

Query: 217  TGGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVTS-------- 261
              G+  L++ + S+L  D  + +IE         ++RL RKKV +  DDV          
Sbjct: 256  KLGLIHLKRDMYSKLLGDEKL-SIEMSHALPTFVVDRLRRKKVIVFLDDVNDSEQLEALA 314

Query: 262  --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    GSRVI+T RDK+VL+ C  ++ Y+++ L + D+ +L    AF        + 
Sbjct: 315  GNHVWFGPGSRVIVTGRDKEVLQ-CKVDEIYKVEGLNHNDSLRLLSMKAFKEKQPPNDYA 373

Query: 314  ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            +L++  + YAQGVPLALKVLG +L  RS++ WE+ + KL+  P   I+++L+ISYD LD 
Sbjct: 374  KLSEMVVNYAQGVPLALKVLGSHLYKRSQKEWETMLNKLKQFPDSNIQKILEISYDELDQ 433

Query: 374  SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
             +K++FLDIACF +G  +D++  I +               K L+ +    R+ MHDL++
Sbjct: 434  MEKDIFLDIACFFKGCEKDKIEDILEGCGFAAEWGILRLTEKCLVTIQ-NNRLEMHDLIQ 492

Query: 421  DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +MG  I ++       K +RLW+ +DI  +L  + G + +EGI LDM+K  + I +N   
Sbjct: 493  EMGLHIAKR-------KGSRLWNSQDICHMLMTDMGKKKVEGIFLDMSKTGK-IRLNHAT 544

Query: 481  FSKMPKLRFLRFY----------------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT 524
            FS+MP LR L+FY                  ++ C    LEG+    +  L W + P K+
Sbjct: 545  FSRMPMLRLLKFYRTWSSPRSQDAVFIVKSAESNC----LEGLS-NRLSLLHWEEYPCKS 599

Query: 525  L--NICAEKLVSLKMPCTKVEQLWDD-----------------VQRLPSSLCTFKTPITF 565
            L  N   E LV L MP + +EQLW+D                 ++RLP  L +     + 
Sbjct: 600  LCSNFFMENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLP-DLSSTTNLTSI 658

Query: 566  EIIDCKMLERLPDELENLEYLTV----KGTTIRELP-----ESLGRLSW----------- 605
            E+  C+ L  +P  ++  + L          +R LP     ESL  LS            
Sbjct: 659  ELWGCESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQLESLSILSLACCPNLKMLPD 718

Query: 606  ----VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC--NLGLLSARNC 659
                VK L L ++S LE  P S+  L  LTF  ++ C+ L++LP L    +L  +    C
Sbjct: 719  IPRGVKDLSL-HDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLPSLLQWKSLRDIDLSGC 777

Query: 660  TSLEKLP--------AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM---KHSLYEER 708
            ++L+ LP         G+   S   Y   C F  L+   L    +   M   +  + E  
Sbjct: 778  SNLKVLPEIPDLPWQVGILQGSRKDY---CRFHFLNCVNLGWYARLNIMACAQQRIKEIA 834

Query: 709  GIKKSMYF----PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFL 764
              K   YF     G++ P+WF +QS+G S T+    P  +     + FAFCAV+ F   L
Sbjct: 835  SAKTRNYFAVALAGSKTPEWFSYQSLGCSITISL--PTCSFNTMFLGFAFCAVLEFEFPL 892

Query: 765  KYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL---YSWFLGKISYV-ESDHVFLGC---NS 817
               R        + + Y  C      +   +    S+    +  + ESDHVFL     +S
Sbjct: 893  VISR--------NSHFYIACESRFENTNDDIRDDLSFSASSLETIPESDHVFLWYRFNSS 944

Query: 818  FGGEYFGPN---YDEFSFRIHCSFHF----PPYLERGE--VKKCGIHFVYAQDSADHILK 868
                +   N     + SF     + F     P  E+ E  VK+CG+H +Y ++  + I  
Sbjct: 945  DLNSWLIQNCCILRKASFEFKAQYRFLSNHHPSTEKWEVKVKRCGVHLIYNENVQNAIAG 1004

Query: 869  D 869
            D
Sbjct: 1005 D 1005


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 306/801 (38%), Positives = 432/801 (53%), Gaps = 130/801 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRGEDTR  FT+HL+  L  + I TFIDD  L RG  IS +L+  IE S  +I+
Sbjct: 22  YEVFLSFRGEDTRHGFTAHLYDALRRRGINTFIDDADLKRGRVISPALVQAIENSMFSIV 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY+VDPS VRKQ  SFG  F    K  
Sbjct: 82  VLSENYASSRWCLEELVKILECMNAGSLTVFPIFYKVDPSDVRKQKGSFGEAFVEHEKNS 141

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E++K W+ ALT+ A+LSG+DS   R E  LI+++ +DV  RL     S    LVG++  
Sbjct: 142 NERVKTWREALTQVANLSGWDSRN-RHEPSLIKDVVSDVFNRLLVISSSDAGDLVGIDSH 200

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I ++ESLL IGS  V  + IWG+GGI K TIA +V+ +IS+ FE   F  NVRE  E  G
Sbjct: 201 IRKMESLLSIGSNDVRIIGIWGMGGIGKTTIARSVYEQISKQFEACCFLSNVREDSEKRG 260

Query: 220 IKDLQKKLLSELSKDG--NMRNIESQL----NRLARKKVRIVFDDVTS------------ 261
           +  LQ++LLS L ++G  ++  ++  L     RL  K+V IV DD  +            
Sbjct: 261 LVKLQEELLSRLLEEGKISISTVDIGLAFIKTRLRFKRVLIVLDDAHNLQQLEYLAGKHD 320

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRD  +L     N  Y +  L   DA  LF + AF  DH    ++EL++
Sbjct: 321 WFGPGSRIIITTRDVHLLNKVGVNGVYEVAHLNNNDAVALFSRHAFEEDHPTEDYMELSN 380

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
            A+ YA+G+PLALKVLG +L  +SK  W+S + KL+I PH++IE VL++S+D LDD++++
Sbjct: 381 YAVSYAKGLPLALKVLGSFLFSKSKLEWKSQLDKLQINPHMDIESVLRVSFDGLDDTEQD 440

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLD+ACF +GE +D VI I D+              KSLI + +  ++ MHDLL++MG 
Sbjct: 441 IFLDVACFFKGEDKDYVIKILDSCGFYPSIGIRVLIDKSLITV-VHNKLWMHDLLQEMGW 499

Query: 425 EIVRKESINH--------PGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           +IVRK S  +        PGK +RLW  +D+Y VL + TGTE IEGI L++  + +EIH 
Sbjct: 500 DIVRKTSHKNPSKRRRLDPGKHSRLWLQEDVYDVLTEKTGTENIEGIFLNLYGL-KEIHY 558

Query: 477 NSYAFSKMPKLRFLRFYGDKN-------------KCMVSHLEGVPFAEVRHLEWPQCPLK 523
            + AF++M KLR L+ Y   N             K   S     P  ++R+L W + PLK
Sbjct: 559 TTEAFAEMKKLRLLKVYNSHNSGDFEYASRNENYKRPFSQDFEFPSNKLRYLYWHRYPLK 618

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCT--------FKTP----------- 562
           +L  N   + LV L + C  VE+LW  V+ +    C          +TP           
Sbjct: 619 SLPSNFHPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSGIPNLERL 678

Query: 563 ---------------------ITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPE 598
                                I   + DCK L+  P   ELE+L+ L + G + +   PE
Sbjct: 679 IFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESLKVLILSGCSKLDNFPE 738

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA-- 656
            L  +  ++ L L + + ++ +P S+ HL+ L  L + +CERL TLP   CNL  LS   
Sbjct: 739 ILENMEGLRELFL-DGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLT 797

Query: 657 -RNCTSLEKLPAGLSSMSSVL 676
              C+ LEKLP  L ++  ++
Sbjct: 798 LSGCSQLEKLPENLGNLECLV 818



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 140/337 (41%), Gaps = 84/337 (24%)

Query: 551  RLPS--SLCTFKTPITFEIIDCKMLE-RLPDEL----ENLEYLTVKGTTIRELPESLGRL 603
            RLPS   LC+ K      + DC + E  LP++L     +LEYL +KG     LP  + +L
Sbjct: 876  RLPSLSGLCSLKQ---LNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDFVTLPTGISKL 932

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
                                      L  L++  C+RLQ LP LP N+  ++A+NCTSLE
Sbjct: 933  C------------------------NLKALYLGCCKRLQELPMLPPNINRINAQNCTSLE 968

Query: 664  KLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE--RGIKKSMYFPGNEI 721
             L +GLS+   + + N                +  W + +   E  R  K + Y PGN I
Sbjct: 969  TL-SGLSAPCWLAFTN--------------SFRQNWGQETYLAEVSRIPKFNTYLPGNGI 1013

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRH----KSGEDDWD 777
            P+WFR+Q MG S  ++   P     +  + FA C V       +  R     +    D D
Sbjct: 1014 PEWFRNQCMGDSIMVQL--PSHWYNDNFLGFAMCIVFALKEPNQCSRGAMLCELESSDLD 1071

Query: 778  GNVYAVCCD---WKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNY----DEF 830
             +      D   W+  S+G           +VESDH++LG        + PN+    D+ 
Sbjct: 1072 PSNLGCFLDHIVWEGHSDGD---------GFVESDHLWLG--------YHPNFPIKKDDM 1114

Query: 831  SFRIHCSFHFPPYLERG---EVKKCGIHFVYAQDSAD 864
             +    S     ++  G   EVK CG   VY +D  D
Sbjct: 1115 DWPNKLSHIKASFVIAGIPHEVKWCGFRLVYMEDLND 1151


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 287/759 (37%), Positives = 431/759 (56%), Gaps = 88/759 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR   TSHL+H L    + T+ID +L +GD ISQ+L+  IE S +++II
Sbjct: 22  YDVFLSFRGEDTRKIITSHLYHALFQAELATYIDYRLQKGDEISQALIEAIEESQVSVII 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE+YA+S+W                      FY++DPSH+RKQ  SF + F    +   
Sbjct: 82  FSEKYATSKWCLDEITKIIECKEGQGQVVIPVFYKIDPSHIRKQQGSFKQAFVEHEQDLK 141

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              +++++W+ ALT+AA+L+G+D    R E++ I++I  DVL +L+  +  + KGL+G+E
Sbjct: 142 ITTDRVQKWREALTKAANLAGWDFQTYRTEAEFIKDIVKDVLLKLNLIYPIELKGLIGIE 201

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            +   IESLL I S  V  + IWG+GGI K T+A A++ K+   FEG  F  NVRE  E 
Sbjct: 202 GNYTRIESLLKIDSRKVRVIGIWGMGGIGKTTLATALYAKLFSRFEGHCFLGNVREQAEK 261

Query: 218 GGIKDLQKKLLSELSKDGN-----MRNIESQL--NRLARKKVRIVFDDVTS--------- 261
            G+  L+ KL SEL    N     M  +E      RL RKKV +V DDV S         
Sbjct: 262 QGLDFLRTKLFSELLPGENHLHENMPKVEYHFITRRLKRKKVFLVLDDVASSEQLEDLID 321

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+TTRDK +    + ++ Y +KEL   D+ +LFC  AF   H      E
Sbjct: 322 DFNCFGPGSRVIVTTRDKHIFS--YVDEIYEVKELNDLDSLQLFCLNAFREKHPKNGFEE 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  I Y +G PLALKVLG  L  RS++ W   +RKL+ IP+V+I  VLK+S+D LD +
Sbjct: 380 LSESVIAYCKGNPLALKVLGARLRSRSEQAWYCELRKLQKIPNVKIHNVLKLSFDDLDHT 439

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           ++ +FLDIACF +GE+RD +IS+ +             A KSLI +     I MHDL+++
Sbjct: 440 EQEIFLDIACFFKGEYRDHIISLLEACNFFPAIGIEVLADKSLITISPEDTIEMHDLIQE 499

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG  IV +ESI  PGKR+RLW  ++++ VLK N GTEAIEGI LD++K+  ++H++  +F
Sbjct: 500 MGWNIVHQESIKDPGKRSRLWDPEEVFDVLKYNRGTEAIEGIILDLSKI-EDLHLSFDSF 558

Query: 482 SKMPKLRFLRFY----GDKNKCMVSHLEGVPFAE-VRHLEWPQCPLKTL--NICAEKLVS 534
           +KM  +RFL+FY      K K  +        ++ +RHL+W    L++L     A+ LV 
Sbjct: 559 TKMTNVRFLKFYYGKWSSKGKIYLPKNGLKSLSDKLRHLQWHGYCLESLPSTFSAKFLVE 618

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLTV- 588
           L MP + +++LWD VQ L          +  + ID   C+ L  +PD  +  NLE L++ 
Sbjct: 619 LVMPYSNLQKLWDGVQNL----------VNLKDIDLRYCENLVEVPDLSKATNLEDLSLS 668

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           +  ++R++  S+  L  ++ L L     ++ +   + HL  L  L +S+C  L+    + 
Sbjct: 669 QCKSLRQVHPSILSLPKLQSLDLEGCIEIQSLQSDV-HLESLQDLRLSNCSSLKEFSVMS 727

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
             L  L   + T +++LPA +   + + ++++     LD
Sbjct: 728 VELRRLWL-DGTHIQELPASIWGCTKLKFIDVQGCDNLD 765



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 31/150 (20%)

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            +R LP+S+G LS   +L+  + SN+E +P SI +L KL  L++ HC +L +LPELP +L
Sbjct: 816 NLRTLPDSIGLLS-SLKLLKLSRSNVESLPASIENLVKLRRLYLDHCMKLVSLPELPESL 874

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD-PNELSEIVKDGWMKHSLYEERGI 710
            LLSA NC SL                 + NF +L+ P +L + ++D            +
Sbjct: 875 WLLSAVNCASL-----------------VTNFTQLNIPFQLKQGLED------------L 905

Query: 711 KKSMYFPGNEIPKWFRHQSMGSSATLKTRP 740
            +S++ PG+ +P+ F   + G+S T+   P
Sbjct: 906 PQSVFLPGDHVPERFSFHAEGASVTIPHLP 935


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 343/1046 (32%), Positives = 500/1046 (47%), Gaps = 222/1046 (21%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VFLSFRGEDTR  FTSHLH  L  K+I TFID+ L RG+ IS SL+  IE S +++II
Sbjct: 22   HHVFLSFRGEDTRVGFTSHLHAALERKNILTFIDNDLRRGEEISPSLVKAIEDSMLSVII 81

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FS+ YASS+W                      FY VDPS +RKQS SFG  F++L KR  
Sbjct: 82   FSQNYASSKWCLDELLKILESRKVRGQIAIPVFYEVDPSDIRKQSGSFGDVFAQLVKRKA 141

Query: 101  EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
             KM+    ++ AL EAA++SG DS  I  ESK IE I  D+L +L   F      LVG++
Sbjct: 142  LKMEEEQCFRAALNEAANISGHDSRKIESESKFIEVIVEDILNKLCKIFPVHPTNLVGID 201

Query: 158  CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
              + +IESLL + ++ V  + IWG+GGI K TIA AV+NKI   FEG  F  NVRE  + 
Sbjct: 202  EHVRKIESLLDMETQDVRIVGIWGMGGIGKTTIARAVYNKICTKFEGFSFMANVREELKR 261

Query: 218  GGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS---------------- 261
              + DLQ++  S +             +RL RKKV IVFDDV S                
Sbjct: 262  RTVFDLQRRFFSRILDQKIWETSPFIKDRLRRKKVLIVFDDVDSSMVLQELLLEQRDAFG 321

Query: 262  -GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
             GSR+++T+RD+QVL N   +  Y +K L + DA +LF   AF        HI L  + +
Sbjct: 322  PGSRILVTSRDQQVL-NQEVDATYEVKALNHMDALQLFKTKAFKKTCPTIDHIHLLGRMV 380

Query: 321  KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
             Y +G PLAL VLG  LC +SKE W SA   L  I +VEI  VL++S+D L+  Q+++FL
Sbjct: 381  TYTKGNPLALVVLGSALCDKSKEDWYSASNGLGQIQNVEILNVLRVSFDGLNTEQRSIFL 440

Query: 381  DIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRMHDLLRDMGREIVR 428
             IACF +G +R     I +            LI+  L       + MHDLL++M   IV 
Sbjct: 441  HIACFFKGINRLHFTRILENKCPAVHYYISVLIDKSLVLASDNILGMHDLLQEMAYSIVH 500

Query: 429  KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
            +ES   PG+R+RL+  +DIY+VLK+N GT+ ++GI LDM+K +R++ + + +F+ M  L 
Sbjct: 501  EES-EDPGERSRLFDPEDIYKVLKENKGTKRVKGICLDMSK-SRKMSLKTDSFAGMNCLE 558

Query: 489  FLRFYG------DKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
            FL FY       +KN+  + H  G+ +   E+R+  W   P K+L  +  AE LV     
Sbjct: 559  FLIFYNPSYFEVEKNRVHLPH-SGLEYLSNELRYFHWDGFPSKSLPQDFSAENLVQFDFS 617

Query: 539  CTKVEQLWDDVQ--------RLPSSLCTFKTP-----ITFEIID---CKMLERLPDELEN 582
             +KVE+LW   Q         L SS C  + P     I  E I+   C+ L+R+P   ++
Sbjct: 618  ESKVEKLWSGKQNLLNLKAINLSSSRCLTELPDLSKAINLEYINLSGCESLKRVPSSFQH 677

Query: 583  LE-----------------------------------------------YLTVKGTTIRE 595
            LE                                               YL + GT++ +
Sbjct: 678  LEKLKCLDLTDCHNLITLPRRIDSKCLEQLFITGCSNVRNCPETYADIGYLDLSGTSVEK 737

Query: 596  LPES--LGRLSWVK--------------RLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            +P S  L ++S +               R++L + + +E +P SI  L+KL  L +  C+
Sbjct: 738  VPLSIKLRQISLIGCKNITKFPVISENIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDCK 797

Query: 640  RLQTLPELPCNLGLLS---ARNCTSLE-----------------------KLPAGLSSMS 673
            RL  LP   C L  L       C+ LE                       KLP+ +    
Sbjct: 798  RLSKLPSSICKLKFLENFYLSGCSKLETFPEIKRPMKSLKTLYLGRTAIKKLPSSIRHQK 857

Query: 674  SVLYVNL-----CNFLKLDPN---------ELSEIVKDGWMKHSL---------YEERGI 710
            S++++ L        L+L P+         E  E +  G +  S+         +++  I
Sbjct: 858  SLIFLELDGASMKELLELPPSLCILSARDCESLETISSGTLSQSIRLNLANCFRFDQNAI 917

Query: 711  KKSMYF---------------PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
             + M                 PG+EIP WF ++S GSS  ++     P+  +KL + AFC
Sbjct: 918  MEDMQLKIQSGNIGDMFQILSPGSEIPHWFINRSWGSSVAIQL----PSDCHKLKAIAFC 973

Query: 756  AVV--VFPAFLKYFRHKSGEDDWDGNVYAVCC---DWKRKSEGHLYSWFLGKISYVESDH 810
             +V    P        K+    W  +  +  C   D   K+E  +Y++   K+   +SDH
Sbjct: 974  LIVHHTVPLNDLLQEDKAINIKWQCHAKSNNCEHDDIIFKTECEIYNFQDSKMR--DSDH 1031

Query: 811  VFLGCNSFGGEYFGPNYD-EFSFRIH 835
            + L   ++  + F    D E +F  +
Sbjct: 1032 MLLWHENWKEDSFSKYSDKEITFEFY 1057


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 285/755 (37%), Positives = 404/755 (53%), Gaps = 107/755 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+  L  K I  FID D+L  G+ IS +LL  IE S  +I+
Sbjct: 10  YDVFLSFRGEDTRNNFTAHLYDALHCKGINAFIDADKLRIGEIISPALLSAIEGSRFSIV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY+VDPS VRKQ  S+G+ F++  +  
Sbjct: 70  VLSENYASSRWCLEELVKILECKKTKGQVVLPIFYQVDPSDVRKQKGSYGKAFAKHEENM 129

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVG 155
            E M++   W+ AL+E  ++SG DS   + ES LI+EI + +L  L +T  S  +  LVG
Sbjct: 130 KENMEKVHIWREALSEVGNISGRDSRN-KDESVLIKEIVSMLLNELLSTPSSDAEDQLVG 188

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   I E+E LLC  S  V  + IWG+GGI K T+A A++N++S  FEG  +  +  E  
Sbjct: 189 IGSQIREMELLLCTESTDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDAGEDL 248

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDV-------------- 259
              G+  LQ+KLLS++    N++     S   RL  ++V IV D+V              
Sbjct: 249 RKRGLIGLQEKLLSQILGHENIKLNGPISLKARLCSREVFIVLDNVYDQDILECLVGSHD 308

Query: 260 --TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRDK++L +      Y +K+LV+ +A +   ++A     +    +EL++
Sbjct: 309 WFGQGSRIIITTRDKRLLMSHGVRVVYEVKKLVHTEAIEFLGRYASKQQIVIDEFMELSN 368

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             I YAQG+PL LKVLG +L   SK  W S + KL+  PH  I+EVL+ISYD LDD +KN
Sbjct: 369 SIITYAQGLPLVLKVLGSFLFSMSKHEWRSELDKLKDTPHGRIQEVLRISYDGLDDKEKN 428

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACF +GE +D VI I D               KSLI +    +I MHDLL++MGR
Sbjct: 429 IFLDIACFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQEMGR 488

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           +I+R+ S   PGKR+RLW +KD Y VL KNTGT+ +EGI  +++ +  EIH  + AF+ M
Sbjct: 489 KIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDI-EEIHFTTKAFAGM 547

Query: 485 PKLRFLRFYG----------DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVS 534
            KLR L+FY            K KC + H                      +   + LV 
Sbjct: 548 DKLRLLKFYDYSPSTNSECTSKRKCKLPH----------------------DFSPKNLVD 585

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITF-EIIDCKMLERLPD--ELENLEYLTVKGT 591
           L + C+ V+QLW  ++ L          + F ++   K L   P+   + NLE L + G 
Sbjct: 586 LSLSCSDVKQLWKGIKVL--------DKLKFMDLSHSKYLVETPNFSGISNLEKLDLTGC 637

Query: 592 T-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           T +RE+  +LG L  +  L L +   L+ IP SI  L  L     S C +++  PE   N
Sbjct: 638 TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFGN 697

Query: 651 LGLLSA--RNCTSLEKLPAGLSSMS--SVLYVNLC 681
           L  L     + T++  LP+ +  +    VL  N C
Sbjct: 698 LEQLKELYADETAISALPSSICHLRILQVLSFNGC 732



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 159/369 (43%), Gaps = 64/369 (17%)

Query: 541  KVEQLWDD---VQRLPSSLCTFKTPITFEIIDCK------MLERLPDELEN--------- 582
            ++++L+ D   +  LPSS+C  +         CK       L  LP +  N         
Sbjct: 700  QLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKFLLSPL 759

Query: 583  -----LEYLTVKGTTIRELPE--SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
                 L+ L ++   I E  +   L  LS ++ L LS N N   +P S+  LS+L  L +
Sbjct: 760  SGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGN-NFISLPSSMSQLSQLVSLKL 818

Query: 636  SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP--NELSE 693
             +C RLQ L ELP ++  + A NC SLE + +  S   S+ +V+    LK+    N +  
Sbjct: 819  QNCRRLQALSELPSSIKEIDAHNCMSLETI-SNRSLFPSLRHVSFGECLKIKTYQNNIGS 877

Query: 694  IVKD-----GWMKHSLY-----EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            +++         K S Y     E   I+ S   PG+EIP WF +QS G+   ++  PP  
Sbjct: 878  MLQALATFLQTHKRSRYARDNPESVTIEFSTVVPGSEIPDWFSYQSSGNVVNIEL-PPNW 936

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYS----WF 799
               N  + FA  AV  F     Y        + +  V+ + C +  ++    Y      +
Sbjct: 937  FNSN-FLGFALSAVFGFDPLPDY--------NPNHKVFCLFCIFSFQNSAASYRDNVFHY 987

Query: 800  LGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFR--IHCSFHFPPYLERGEVKKCGIHFV 857
                + +ESDH++LG        + P    F +    H    F  Y     VK+CGIH V
Sbjct: 988  NSGPALIESDHLWLG--------YAPVVSSFKWHEVNHFKAAFQIYGRHFVVKRCGIHLV 1039

Query: 858  Y-AQDSADH 865
            Y ++D +D+
Sbjct: 1040 YSSEDVSDN 1048


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 333/988 (33%), Positives = 491/988 (49%), Gaps = 229/988 (23%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            +DVFLSFRGEDTR  FTSHL+  L  K I+ FID QL RGD IS SLL TIE + +++I+
Sbjct: 46   HDVFLSFRGEDTRGGFTSHLYAALDRKQIRAFIDYQLRRGDEISASLLRTIEEAKLSVIV 105

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FSE YASS+W                      FY+VDPSHVR Q+ SFG   +RL K+  
Sbjct: 106  FSENYASSKWCLEELAKIIERRRNNGQIVIPVFYKVDPSHVRNQTRSFGDALARLIKKKA 165

Query: 101  ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGV 156
               +K + +++ALT AA+LSG+       E + I+ I  DVL++L A   S    GL+G+
Sbjct: 166  LTMDKEQSFRDALTAAANLSGWSLGNSELEFEFIKNIVGDVLEKLHAMSSSHTMAGLLGI 225

Query: 157  ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
            +  + ++ESLL I S  V  + IWG+GGI K TIA AV NK+   FE  +FA N R+  +
Sbjct: 226  DVHVSKVESLLNIESPDVLIVGIWGMGGIGKTTIAEAVCNKVHSQFERIFFA-NCRQQSD 284

Query: 217  TGGIKDLQKKLLSE--LSKDGNMRNIESQL-NRLARKKVRIVFDDVT------------- 260
                +   K+LL +  L+  G++  ++S + +RL R KV IV DDV              
Sbjct: 285  LP--RRFLKRLLGQETLNTMGSLSFLDSFVRDRLRRIKVFIVLDDVDDLMRLDEWRDLLD 342

Query: 261  -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG--DHLDAS 311
                   SGS+V+IT+R+KQ+LKN   ++ Y ++ L YADA +LF   A       +D  
Sbjct: 343  GRNNSFGSGSKVLITSRNKQLLKNV-VDETYEVEGLNYADAIQLFSSKALKNCIPTIDQR 401

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            H  L  K +++ QG PLALKVLG  L  +S E W SA++KL + P  +IE  L+ISYD L
Sbjct: 402  H--LIIKNVRHVQGNPLALKVLGSSLYDKSIEEWRSALKKLALDP--QIERALRISYDGL 457

Query: 372  DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINL--DLFYR--I 413
            D  QK +FLDIA F +G  + E   I D                K LI+   D F+R  +
Sbjct: 458  DLEQKPIFLDIAHFFKGRMQGEATGILDCLYGQSVNFDISTLIDKCLISTAKDYFHRDKL 517

Query: 414  RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
             MHDLL++M   IVR ES + PG+R+RL H  D+ Q+L++N GT+ I+GISLDM+ ++R+
Sbjct: 518  EMHDLLQEMAFNIVRAES-DFPGERSRLSHPPDVVQLLEENKGTQQIKGISLDMSMLSRQ 576

Query: 474  IHMNSYAFSKMPKLRFLRF----YGDKNKCM---VSHLEGVPFAEVRHLEWPQCPLKTL- 525
            IH+ S AF+ M  LRFL      Y  ++K +    + LE +P  E+R+  W + PLK+L 
Sbjct: 577  IHLKSDAFAMMDGLRFLNIYFSRYSKEDKILHLPPTGLEYLP-NELRYFLWSRFPLKSLP 635

Query: 526  -NICAEKLVSLKMPCTKVEQLWDDVQ-----------------RLPSSLCTFKTPITFEI 567
             +  AE LV L +  +K+ +LW  V+                  LP  L   K  ++ ++
Sbjct: 636  PSFRAEHLVELHLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELP-DLSMAKNLVSLDL 694

Query: 568  IDCKMLERLPDEL----------------------------------------------E 581
             DC  L  +P  L                                              +
Sbjct: 695  TDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPMLDSKVLRFLLISRCLDVTTCPTISQ 754

Query: 582  NLEYLTVKGTTIRELPESL-GRLSWVKRLILSN--------------------NSNLERI 620
            N+E+L ++ T+I+E+P+S+ G+L   +RL LS                      + ++ +
Sbjct: 755  NMEWLWLEQTSIKEVPQSVTGKL---ERLCLSGCPEITKFPEISGDIEILDLRGTAIKEV 811

Query: 621  PESIRHLSKLTFLFISHCERLQT------------------------------------- 643
            P SI+ L++L  L +S C +L++                                     
Sbjct: 812  PSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSSLIKHMISLTF 871

Query: 644  ----------LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
                      LPELP +L  L+  +C SLE + + ++     L ++  N  KLD   L  
Sbjct: 872  LNLDGTPIKALPELPPSLRYLTTHDCASLETVTSSINIGRLELGLDFTNCFKLDQKPLVA 931

Query: 694  IVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
             +           + GI+  M  PG+EIP+WF  + +GSS T++     P+  ++L   A
Sbjct: 932  AMHLKIQSGEEIPDGGIQ--MVLPGSEIPEWFGDKGIGSSLTMQL----PSNCHQLKGIA 985

Query: 754  FCAVVVFPAFLKYFRHKSGEDDWDGNVY 781
            FC V + P       ++  +DD D N+Y
Sbjct: 986  FCLVFLLPLPSHDMPYEV-DDDIDVNLY 1012


>gi|356569977|ref|XP_003553169.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 833

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 262/698 (37%), Positives = 396/698 (56%), Gaps = 65/698 (9%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFTSHL+  L  K ++T+ID+ L +GD IS +L+  IE S ++I++
Sbjct: 20  YDVFLSFRGEDTRRNFTSHLYEALKQKKVETYIDEHLEKGDEISPALIKAIEDSHVSIVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS+W                      FY +DPS VRKQ+ S+ + F++      
Sbjct: 80  FSKNYASSKWCLVELIKILDCKKDRGQIVIPVFYEIDPSDVRKQTGSYEQAFAKHEGE-- 137

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
               +WK ALTEAA+L+G+DS   R + +L+++I  DVL++L   +Q++ KGLVG+E   
Sbjct: 138 PSCNKWKTALTEAANLAGWDSRTYRTDPELLKDIVADVLQKLPPRYQNQRKGLVGIEEHC 197

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           + IESLL IG   V  L IWG+GGI K  +A  +++K+S  FEGS F  NV E  +    
Sbjct: 198 KHIESLLKIGPTEVRTLGIWGMGGIGKTALATTLYDKLSHEFEGSSFLSNVNEKSDKLEN 257

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWA 280
                  +S L     +  ++        +K+++ +D +  GSRVI+TTR++++L     
Sbjct: 258 HCFGNSDMSTLRGKKALIVLDDVATSEHLEKLKVDYDFLEPGSRVIVTTRNREILGP--N 315

Query: 281 NKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGR 340
           ++ Y++KEL    + +LFC   FG       + +L+++ + Y +G+PLALKV+G  L  +
Sbjct: 316 DEIYQVKELSSHHSVQLFCLTVFGEKQPKEGYEDLSERVLSYCKGIPLALKVMGASLRRK 375

Query: 341 SKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA 400
           SKE WES +RKL+ I  +EI  VLK+SYD LD SQK++FLDIACF +G  RD V  + DA
Sbjct: 376 SKEAWESELRKLQKISSMEIHTVLKLSYDGLDHSQKDIFLDIACFFKGRERDWVTRVLDA 435

Query: 401 -------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDI 447
                         K+LI +     I MHDL+++MG EIVR+E I  PG+++RLW  +++
Sbjct: 436 FDFFAASGIEVLLDKALITISEGNHIEMHDLIQEMGWEIVRQECIKDPGRQSRLWRQEEV 495

Query: 448 YQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF------YGDKNKCMV 501
             +LK N GT+ +EGI L + K+   + ++    +KM  LRFL+F      YG K   + 
Sbjct: 496 QNILKYNRGTDVVEGIILSLRKLTEALRLSFDFLAKMTNLRFLQFYDGWDDYGSKVP-VP 554

Query: 502 SHLEGVPFAEVRHLEWPQCPLKT--LNICAEKLVSLKMPCTKVEQLWDDVQRLPS--SLC 557
           +  E +P  ++R+L W    L++  LN CAE+LV L MP +K+++LWD VQ L +   + 
Sbjct: 555 TGFESLP-DKLRYLHWEGFCLESLPLNFCAEQLVELYMPFSKLKKLWDGVQNLVNLKIIG 613

Query: 558 TFKTPITFEIIDCKMLERLPDELENLEY------LTVKGTTIRELP----ESLGRLSWVK 607
              +    E+ D    E+L  E+ NL +      L V   +++ L      SL   S   
Sbjct: 614 LQGSKDLIEVPDLSKAEKL--EIVNLSFCVSLLQLHVYSKSLQGLNAKNCSSLKEFSVTS 671

Query: 608 RLILSNN---SNLERIPESIRHLSKLTFLFISHCERLQ 642
             I   N   + +  +P SI    KL FL ++ C+ L+
Sbjct: 672 EEITELNLADTAICELPPSIWQKKKLAFLVLNGCKNLK 709


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 300/815 (36%), Positives = 428/815 (52%), Gaps = 134/815 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT HLH  L  K I TF+DDQL RG+ +S +LL  IE S  +III
Sbjct: 16  YDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQVSPALLNAIEESRFSIII 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY V+PSHV+KQ+ SF   F++  +   
Sbjct: 76  FSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNVNPSHVKKQTGSFAEAFAKHEQENR 135

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           EKM++   W+ ALTE A +SG+DS   R ESKLIEEI  D+  +L  T  S  KGLVG+E
Sbjct: 136 EKMEKVVKWREALTEVATISGWDSRD-RHESKLIEEIVRDIWNKLVGTSPSYMKGLVGME 194

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E ++SLLCIGS  V  + IWG+ GI K TIA  ++ +I   FEG  F  NVRE    
Sbjct: 195 SRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYK 254

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT----------- 260
            G+  LQ +LLS++ K+ N       + I    + L  +KV I+ DDV            
Sbjct: 255 HGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAGD 314

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+IITTRD+ +L     +  Y +KEL   +A KLFC +AF   H      +L
Sbjct: 315 NNWFGSGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFRQL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
              A+ Y  G+PLALKVLG  L  +    W+S + KL+  P+ E++ VLK S++ LDD++
Sbjct: 375 CGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGLDDNE 434

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           +N+FLDIA F +G  +D V  I D+              KSLI +    ++ MHDLL++M
Sbjct: 435 QNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISE-NKLCMHDLLQEM 493

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR++S   PG+R+RL  H+DI  VL  NTGTEA+EGI LD++  ++E++ +  AF+
Sbjct: 494 GWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLS-ASKELNFSIDAFT 551

Query: 483 KMPKLRFLRFYG---DKNKCMVSHLEGVPFA---------------------------EV 512
           KM +LR L+      D++   +S  E + +                             +
Sbjct: 552 KMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLSNNL 611

Query: 513 RHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDC 570
           R L W   PLK+   N   EKLV L M  ++++Q W+  +        F+   + ++   
Sbjct: 612 RDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKK-------GFEKLKSIKLSHS 664

Query: 571 KMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
           + L ++PD   + NL  L +KG T++ E+  S+G L  +  L L     L+    SI H+
Sbjct: 665 QHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HM 723

Query: 628 SKLTFLFISHCERLQTLPELPCN--------------------------LGLLSARNCTS 661
             L  L +S C +L+  PE+  N                          L LL+ + C S
Sbjct: 724 ESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKS 783

Query: 662 LEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
           LE LP  +  + S+  L ++ C+ LK  P+ L  +
Sbjct: 784 LESLPRSIFKLKSLKTLILSGCSELKDLPDNLGSL 818



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 151/317 (47%), Gaps = 39/317 (12%)

Query: 575  RLPD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
            RLP    L +L  L ++   + E  LP  LG +  ++RL LS NS +  IP S+  LS+L
Sbjct: 875  RLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFI-TIPASLSGLSRL 933

Query: 631  TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV----LYVNLCNFLKL 686
              L + +C+ LQ+LPELP ++  L+A +CTSLE      S+ +S     L  N  N  +L
Sbjct: 934  RSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFTCSSSAYTSKKFGDLRFNFTNCFRL 993

Query: 687  DPNELSEIVK---DGWMKHS-----LYEERGIKK-----SMYFPGNEIPKWFRHQSMGSS 733
              N+ S+IV    +G    S     L  +RGI       +   PGN IP+WFRHQS+G S
Sbjct: 994  GENQGSDIVGAILEGIQLMSSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGCS 1053

Query: 734  ATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCC---DWKRK 790
              ++   P+     KL+  AFCA + F   +       G    + + + + C   D   +
Sbjct: 1054 VNIEL--PQHWYNTKLMGLAFCAALNFKGAM------DGNPGTEPSSFGLVCYLNDCFVE 1105

Query: 791  SEGH-LYSWFLGKISYVESDHVFLGCNSFGGEY--FGPNYDEFSFRIHCSFHFPPYLERG 847
            +  H LY+   G   ++ESDH      S        G  + + S  +  SF        G
Sbjct: 1106 TGLHSLYTPPEGS-KFIESDHTLFEYISLARLEICLGNWFRKLSDNVVASFALTG--SDG 1162

Query: 848  EVKKCGIHFVYAQDSAD 864
            EVKKCGI  VY +D  D
Sbjct: 1163 EVKKCGIRLVYEEDEKD 1179



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 5/116 (4%)

Query: 570 CKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C  L++ P+    +E+L  L+++GT I+ LP S+  L+ +  L L    +LE +P SI  
Sbjct: 734 CSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFK 793

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           L  L  L +S C  L+ LP+   +L  L+  N   + ++++P  ++ ++++  ++L
Sbjct: 794 LKSLKTLILSGCSELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSL 849


>gi|147784070|emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 278/788 (35%), Positives = 417/788 (52%), Gaps = 113/788 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+H L  K I TFIDD +L RG  IS +L+  IE S  +I+
Sbjct: 16  YDVFLSFRGEDTRNNFTAHLYHALCQKGINTFIDDDKLERGQVISPALVAAIENSMFSIV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           + S+ YA SRW                      FY VDPS VR+Q   FG   ++  +  
Sbjct: 76  VLSKNYAFSRWCLQELVKIVECXKSRRQRVVPIFYNVDPSDVRRQRGIFGEALAKHEENS 135

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E+++ WK+ALT+ A+LSG+DS   + E  LI+EI   +L +L +T  S  + LVG++
Sbjct: 136 EXMERVQSWKDALTQVANLSGWDSRN-KNEPLLIKEIVTXILNKLLSTSISDXENLVGID 194

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++EIE  LC+GS+    + IWG+GGI K T+A A++ KI+  FE   F  NV E    
Sbjct: 195 ARMQEIEMRLCLGSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENVGEDLAK 254

Query: 218 GGIKDLQKKLLSELSKDGN--MRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVL 275
            G+  LQ+K L++L ++ N  M+   S   RL  KK     D    GSR+IITTRDK +L
Sbjct: 255 EGLIGLQQKFLAQLLEEPNLNMKAXTSIKGRLHSKK-----DWFGRGSRIIITTRDKXLL 309

Query: 276 KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGC 335
            +      Y  +   Y +A +    ++          +E++ + I YAQG+PLAL+VLG 
Sbjct: 310 ISHGVLNYYEAQRFNYDEAXEFLTPYSLKHKIPXDDFMEVSKEVIGYAQGLPLALEVLGS 369

Query: 336 YLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVI 395
           +L   +KE W + + KL+  P+++I+EVLK+SYD LDD +KN+ LDIACF +GE +D V+
Sbjct: 370 FLFSMTKEEWRNQLDKLKSTPNMKIQEVLKVSYDGLDDKEKNIXLDIACFFKGEDKDYVM 429

Query: 396 SIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLW 442
            I D               KSL+ +     J MHDL+++MGREIVR++S+  PGKR+RLW
Sbjct: 430 EILDGCGFFSLSGIRALIDKSLVTISWSNEJMMHDLIQEMGREIVRQQSLXEPGKRSRLW 489

Query: 443 HHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN----- 497
            H+DI  VLKKNT TE IEGI L+++ +   ++  + A ++M +LR L+ Y  KN     
Sbjct: 490 FHEDINXVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALARMNRLRLLKVYNSKNISRNF 549

Query: 498 -------KCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
                   C V+  +   F   ++R L +    LK+L  +   + L+ L MP ++++QLW
Sbjct: 550 KDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKSLPNDFNPKNLIELSMPYSRIKQLW 609

Query: 547 DDV----------------------------------------QRLPSSLCTFKTPITFE 566
             +                                        +++ SSL   K  I   
Sbjct: 610 KGIXVLANLKFMDLSHSKYLIETPNFRGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLN 669

Query: 567 IIDCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE 622
           + +C+ML+ LP    +L++LE   + G +  +E PE+ G L  +K L   +   +  +P 
Sbjct: 670 LKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKEL-YXDEIAIGVLPS 728

Query: 623 SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           S   L  L  L    C+   +       L LL  R+  S+  +   LS + S++ +NL N
Sbjct: 729 SFSFLRNLQILSFKGCKGPSS------TLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSN 782

Query: 683 F-LKLDPN 689
             L  +PN
Sbjct: 783 CNLSDEPN 790



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 151/419 (36%), Gaps = 134/419 (31%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE--------------------------LEN 582
            ++ LPSS C  K+  TF +  C   +  P+                           L N
Sbjct: 676  LKSLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRN 735

Query: 583  LEYLTVKG-----TTIRELP----ESLGR----LSWVKRLILSNNSNLE----------- 618
            L+ L+ KG     +T+  LP     S+G     LS ++ LI  N SN             
Sbjct: 736  LQILSFKGCKGPSSTLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLG 795

Query: 619  ----------------RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
                             +P +I  LS LT L + +C+RLQ LPELP ++  + A NCTSL
Sbjct: 796  FLSSLEELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSL 855

Query: 663  EK---------LPAGL---------------------SSMSSVLYVNLCNFLKLDPNELS 692
            +          LP G                      +S   +      ++ ++BP    
Sbjct: 856  KDVSYQVLKSLLPTGQHQKRKFMVXVVKPDTALAVLEASNXGIRXXXRASYQRIBP---- 911

Query: 693  EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
             +VK G    +L          + PG+ IP W R+QS GS    +  PP     N  + F
Sbjct: 912  -VVKLGIAXXAL--------KAFIPGSRIPDWIRYQSSGSEVKAEL-PPNWFNSN-FLGF 960

Query: 753  AFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGK-ISY---VES 808
            AF + V    F   F  K+           V  DW  + +       + + IS+   +E 
Sbjct: 961  AF-SFVTCGHFSCLFMLKAD----------VLFDWTSRDDSSSVDIIIVEMISFKRRLEX 1009

Query: 809  DHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG--EVKKCGIHFVYAQDSADH 865
            DHV L           P     S   H    F      G  E+K+CG+  VY+ +  +H
Sbjct: 1010 DHVCLCYVPL------PQLRNCSQVTHIKVSFMAVSREGEIEIKRCGVGXVYSNEDGNH 1062


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 276/734 (37%), Positives = 404/734 (55%), Gaps = 96/734 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR  FT HL+  L  K I+TF+D QL RG+ I+ +L+  IE S  +II+
Sbjct: 65  FDVFLSFRGEDTRYTFTDHLYKALRAKGIETFMDYQLRRGELITPALVTAIEGSRHSIIV 124

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRLR 96
            SE YASS+W                      FY V+PS V  Q  SFG+    H  +L+
Sbjct: 125 LSENYASSKWCLDELVKILQSQNTKERRAVPIFYNVNPSDVGNQRGSFGKALADHEEKLK 184

Query: 97  KRFPEKMK-------RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK 149
               +K+K       RW+ ALT+   +SGF S+  +PE++ IEEI  D+ K L+    S 
Sbjct: 185 ADHEKKLKYDMERVQRWRKALTQVGKISGFTSSRDKPETQFIEEIVTDISKDLNCVSSSD 244

Query: 150 NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
            K LVG+ C I E+ESLLC+ S  V  + IWG+GGI K T+A  ++ ++   FEG  F  
Sbjct: 245 AKNLVGMNCCIREMESLLCLESTKVLMVGIWGMGGIGKTTLARVIYERVLCQFEGYCFLA 304

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMR-NIESQLNRLARKKVRIVFDDVT-------- 260
            ++       + +L+ +LLS++  D N+   + S   RL  KKV +V DDV         
Sbjct: 305 GLKST----SMDNLKAELLSKVLGDKNINMGLTSIKARLHSKKVLVVIDDVNHQSMLETL 360

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SRVIITTRDK +L     +  Y +++L   +A +LF  +AF         
Sbjct: 361 VGGHDWFGPQSRVIITTRDKHLLTVQGVDAVYEVQKLEDDNAIQLFSYYAFKNKPPTRDV 420

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L D+   YAQG+PLALKVLGC LC R+ + W   + +L+ I + EI+EVL+IS+D L+
Sbjct: 421 MKLLDQITSYAQGLPLALKVLGCSLCDRNADYWTDKLNQLKKISNGEIQEVLQISFDGLE 480

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D++K +FLDIACF  G  +  V  I ++              KSLI +    R+ MHDLL
Sbjct: 481 DNEKEIFLDIACFFRGRGQTFVKKILESCGFSMVSGIENLIDKSLITITQDDRLEMHDLL 540

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +++G +I+RK S   PG+R+RLW  KD+  +LK+ TG + +EGI  D++ +  E++  + 
Sbjct: 541 QEVGWQIIRKTSPKEPGRRSRLWEQKDVSHILKRETGAQEVEGIFFDLSGL-EEMNFTTK 599

Query: 480 AFSKMPKLRFLRFY-------GDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NIC 528
           AFS+M  LR L  Y       G K +C +   +   F   E+R+L W + P ++L  +  
Sbjct: 600 AFSQMTNLRLLEIYRSNLRDTGGKMQCKLHVSDDFKFHYDELRYLHWDEYPCESLPFDFE 659

Query: 529 AEKLVSLKMPCTK-VEQLWDDVQRLPSSLCTFKTPITFEIIDC---KMLERLPD--ELEN 582
           +E LV   MP ++ + QLW   Q++  +L         E +D    + L+  PD     N
Sbjct: 660 SENLVHFCMPRSRHLTQLWKG-QKVFGNL---------EFVDVSYSQYLKETPDFSRATN 709

Query: 583 LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           LE L +KG T +R++  SLG LS +  L L N +NLE +P SIR L  L  L +S C +L
Sbjct: 710 LEVLVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP-SIRWLVSLETLILSGCSKL 768

Query: 642 QTLPELPCNLGLLS 655
           + LPE+P ++  LS
Sbjct: 769 EKLPEVPQHMPYLS 782



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 121/306 (39%), Gaps = 68/306 (22%)

Query: 580  LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            L +L YL + GT+I  LP +L RL  ++RL L+N                        C 
Sbjct: 856  LTSLTYLNLSGTSIIRLPWNLERLFMLQRLELTN------------------------CR 891

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLP--AGLSSMSSVLYVNLCNF------LKLDPNEL 691
            RLQ LP LP ++  ++A NCTSLE +   +        L+ N          ++ D   +
Sbjct: 892  RLQALPVLPSSIERMNASNCTSLELVSPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQSV 951

Query: 692  -SEIVKDGWMK--HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
             S +V   W     S +   GI  S  FPG+EIP WFRH S G    ++  PP     + 
Sbjct: 952  ASHVVPGAWRSTYASWHPNVGIPFSTVFPGSEIPDWFRHHSQGHEINIEV-PPDWYINSN 1010

Query: 749  LISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKR---KSEGHLYSWFLGKISY 805
             + FA  AV+                  D   + + CD       S  H    F G  +Y
Sbjct: 1011 FLGFALSAVMA--------------PQHDSRAWYMYCDLDTHDLNSNSHRICSFFGSWTY 1056

Query: 806  ------VESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG-EVKKCGIHFVY 858
                  +ESDHV+L         + P++  FS        F      G  VK CG   VY
Sbjct: 1057 QLQHTPIESDHVWLA--------YVPSFLSFSCEKWSHIKFSFSSSGGCVVKSCGFCPVY 1108

Query: 859  AQDSAD 864
             + ++D
Sbjct: 1109 IKGTSD 1114


>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 302/844 (35%), Positives = 434/844 (51%), Gaps = 163/844 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT HLH  L  K I TF+DDQL RG+ +S +LL  IE S  +III
Sbjct: 16  YDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQVSPALLNAIEESRFSIII 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY V+PSHV+KQ+ SF   F++  +   
Sbjct: 76  FSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNVNPSHVKKQTGSFAEAFAKHEQENR 135

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           EKM++   W+ ALTE A +SG+DS   R ESKLIEEI  D+  +L  T  S  KGLVG+E
Sbjct: 136 EKMEKVVKWREALTEVATISGWDSRD-RHESKLIEEIVRDIWNKLVGTSPSYMKGLVGME 194

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E ++SLLCIGS  V  + IWG+ GI K TIA  ++ +I   FEG  F  NVRE    
Sbjct: 195 SRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYK 254

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT----------- 260
            G+  LQ +LLS++ K+ N       + I    + L  +KV I+ DDV            
Sbjct: 255 HGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAGD 314

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+IITTRD+ +L     +  Y +KEL   +A KLFC +AF   H      +L
Sbjct: 315 NNWFGSGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFRQL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
              A+ Y  G+PLALKVLG  L  +    W+S + KL+  P+ E++ VLK S++ LDD++
Sbjct: 375 CGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGLDDNE 434

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           +N+FLDIA F +G  +D V  I D+              KSLI +    ++ MHDLL++M
Sbjct: 435 QNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITIS-ENKLCMHDLLQEM 493

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR++S   PG+R+RL  H+DI  VL  NTGTEA+EGI LD++  ++E++ +  AF+
Sbjct: 494 GWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLS-ASKELNFSIDAFT 551

Query: 483 KMPKLRFLRFYG---DKNKCMVSHLEGVPFA---------------------------EV 512
           KM +LR L+      D++   +S  E + +                             +
Sbjct: 552 KMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLSNNL 611

Query: 513 RHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD----------------------- 547
           R L W   PLK+   N   EKLV L M  ++++Q W+                       
Sbjct: 612 RDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIP 671

Query: 548 ------DVQRLPSSLCT-----------FKTPITFEIIDCKML----------------- 573
                 +++RL    CT            K  I   +  CK L                 
Sbjct: 672 DFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTL 731

Query: 574 ------ERLPDELENLEY---LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
                 ++ P+   N+E+   L+++GT I+ LP S+  L+ +  L L    +LE +P SI
Sbjct: 732 SGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSI 791

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCN 682
             L  L  L +S+C RL+ LPE+  N+  L     + + + +LP+ +  ++ ++++NL N
Sbjct: 792 FKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKN 851

Query: 683 FLKL 686
             KL
Sbjct: 852 CKKL 855



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 175/396 (44%), Gaps = 66/396 (16%)

Query: 522  LKTLNICA--------EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKML 573
            L+TL +C         + L SL+   T++      VQ +P S+          +  CK  
Sbjct: 868  LRTLTLCGCSELKDLPDNLGSLQC-LTELNADGSGVQEVPPSITLLTNLQILSLAGCKGG 926

Query: 574  E------------------RLPD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLIL 611
            E                  RLP    L +L  L ++   + E  LP  LG +  ++RL L
Sbjct: 927  ESKSRNMIFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDL 986

Query: 612  SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
            S NS +  IP S+  LS+L  L + +C+ LQ+LPELP ++  L+A +CTSLE      S+
Sbjct: 987  SRNSFI-TIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFTCSSSA 1045

Query: 672  MSSV----LYVNLCNFLKLDPNELSEIVK---DGWMKHS-----LYEERGIKK-----SM 714
             +S     L  N  N  +L  N+ S+IV    +G    S     L  +RGI       + 
Sbjct: 1046 YTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPDRGIPTPHNEYNA 1105

Query: 715  YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGED 774
              PGN IP+WFRHQS+G S  ++   P+     KL+  AFCA + F   +       G  
Sbjct: 1106 LVPGNRIPEWFRHQSVGCSVNIEL--PQHWYNTKLMGLAFCAALNFKGAM------DGNP 1157

Query: 775  DWDGNVYAVCC---DWKRKSEGH-LYSWFLGKISYVESDHVFLGCNSFGGEY--FGPNYD 828
              + + + + C   D   ++  H LY+   G   ++ESDH      S        G  + 
Sbjct: 1158 GTEPSSFGLVCYLNDCFVETGLHSLYTPPEGS-KFIESDHTLFEYISLARLEICLGNWFR 1216

Query: 829  EFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
            + S  +  SF        GEVKKCGI  VY +D  D
Sbjct: 1217 KLSDNVVASFALTG--SDGEVKKCGIRLVYEEDEKD 1250



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 17/219 (7%)

Query: 467 MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN 526
           +   +  IHM S     +     L+ + +    +  ++E +P   +        PL   N
Sbjct: 714 LKSFSSSIHMESLQILTLSGCSKLKKFPE----VQGNMEHLPNLSLEGTAIKGLPLSIEN 769

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL 586
           +    L++LK  C  +E L       P S+   K+  T  + +C  L++LP+  EN+E L
Sbjct: 770 LTGLALLNLK-ECKSLESL-------PRSIFKLKSLKTLILSNCTRLKKLPEIQENMESL 821

Query: 587 T---VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
               + G+ I ELP S+G L+ +  L L N   L  +P+S   L+ L  L +  C  L+ 
Sbjct: 822 MELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKD 881

Query: 644 LPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           LP+   +L  L+  N   + ++++P  ++ ++++  ++L
Sbjct: 882 LPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSL 920


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 271/699 (38%), Positives = 395/699 (56%), Gaps = 99/699 (14%)

Query: 8   FRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYA 67
           FRGEDTR NFTSHLH  L+ K I TFIDD L RG  IS SLL  IE S I+++I S+ Y 
Sbjct: 6   FRGEDTRYNFTSHLHAALNGKRIPTFIDDDLERGKEISPSLLKAIEESKISVVIISQDYP 65

Query: 68  SSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF---PEKM 103
           SS+W                      FYRVDPSHVR Q+ SF   F++ ++      EK+
Sbjct: 66  SSKWCLEELVKILECMKNRGQMVIPVFYRVDPSHVRNQTGSFEDVFAQHKESLLVSKEKV 125

Query: 104 KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEI 163
           + W+ AL E A+LSG+ S     + K      +  L +L + + S+  GLVG+E  I+EI
Sbjct: 126 QSWRAALKEVANLSGWHSTSTSHQGK------SKKLNQLSSNYYSR--GLVGIESRIQEI 177

Query: 164 ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDL 223
           E L    S  V K+ IWG+GG+ K T+A A++++I+  FE   F  N RE  +   +  L
Sbjct: 178 EFLFRKISLSVRKVGIWGMGGLDKTTLARAIYDRIAPQFESCCFLSNTREQLQRCTLAQL 237

Query: 224 QKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT------------------SGS 263
           Q +L S L ++ +  N+      +RL  KKV I+ DD                    SGS
Sbjct: 238 QNQLFSTLLEEQSTLNLRPSFIKDRLCCKKVLIIIDDADNTTQLQELLLDTEPDYFGSGS 297

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL-TDKAIKY 322
           R+IIT+RDKQVLK+   ++ Y M+EL   +A +LF   AF  D+    H  L  ++ +KY
Sbjct: 298 RIIITSRDKQVLKSTCVDEIYEMEELNEHEALQLFNFKAFKQDNPTGHHRRLQAERVVKY 357

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A+G PLAL VLG  L G+SK+ WESA+ +L+ IPH +I+EVL+ SYD LD  Q+++FLDI
Sbjct: 358 AKGNPLALTVLGSTLFGKSKKDWESALERLKRIPHKDIDEVLRTSYDGLDSEQRSIFLDI 417

Query: 383 ACFLEGEHRDEVISIFDAS--------KSLINLDLFY------RIRMHDLLRDMGREIVR 428
           ACF  G++++ +  I D           +LI+  L        ++ +HDLL++MGR+IV 
Sbjct: 418 ACFFRGQNQNFITKILDGYYVSAHIVISTLIDRSLIMLSSDGSKLELHDLLQEMGRKIVF 477

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           +ES N PG R+RLW  +D+  VL +N GTEAIEGISLD +K   +I +    FS+M  LR
Sbjct: 478 EESKN-PGNRSRLWIPEDVCYVLNENKGTEAIEGISLDKSKATSKIRLRPDTFSRMYHLR 536

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
           FL+FY +K K  +  L+  P  E+RHL+W   P+K+L  N   + LV L +  +KV++LW
Sbjct: 537 FLKFYTEKVKISLDGLQSFP-NELRHLDWNDFPMKSLPPNFSPQNLVVLNLRDSKVKKLW 595

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
              Q L          +  + ID          L + +YL      I +L +++     +
Sbjct: 596 TGTQNL----------VKLKEID----------LSHSKYLI----GIPDLSKAIN----I 627

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           +++ L+  S+LE +  S+++L+KL FL +  C +L++LP
Sbjct: 628 EKIYLTGCSSLEEVHSSLQYLNKLEFLDLGDCNKLRSLP 666



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 50/306 (16%)

Query: 563 ITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLER 619
           +   + +C+ L  LP    ++++L  L +    I+++P S+  LS +  L L++   LE 
Sbjct: 722 VHLSVYNCRKLSILPSSFYKMKSLRSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLES 781

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
           +P SI  L +L  ++++ CE L++LPELP +L +L A NC SLE     ++S   +L V 
Sbjct: 782 LPSSIGGLPRLATMYLNSCESLRSLPELPLSLRMLFANNCKSLES--ESITSNRHLL-VT 838

Query: 680 LCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY--FPGNEIPKWFRHQSMGSSATLK 737
             N L+L  ++ +  + D  +         +    Y  +PG+E+P WF +QSMGSS T++
Sbjct: 839 FANCLRLRFDQTALQMTDFLV------PTNVPGRFYWLYPGSEVPGWFSNQSMGSSVTMQ 892

Query: 738 TRPPRPAGYNKLISFAFCAVVVF--PAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL 795
           +    P     L + AFC V  F  P++   F+ +  ED                  G +
Sbjct: 893 S----PLNMYMLNAIAFCIVFEFKKPSYC-CFKVECAEDHAKATF----------GSGQI 937

Query: 796 YSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHF--------PPYLERG 847
           +S  +      ++DHV +  N     Y        S RI  SF+F           L+  
Sbjct: 938 FSPSI----LAKTDHVLIWFNCTRELY-------KSTRIASSFYFYHSKDADKEESLKHC 986

Query: 848 EVKKCG 853
           +VK+CG
Sbjct: 987 KVKRCG 992


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 291/761 (38%), Positives = 419/761 (55%), Gaps = 88/761 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR+NFT HL+  L  K I+TF+DD+ +R G+ IS +L+  I+ S  +II
Sbjct: 20  YAVFLSFRGEDTRNNFTGHLYKALDQKGIETFMDDKKLRTGEEISPTLVTAIQRSRCSII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS+W                      FY VDPSHVR Q+ SFG   ++ ++  
Sbjct: 80  VLSENYASSKWCLEELVMILECKRTKNLKVVPIFYNVDPSHVRNQTGSFGEALAKHKENL 139

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               EK+++W+ ALT+ A+LSG  S   +PE++LIEEI  D+ K L +        LV V
Sbjct: 140 KIKVEKVQKWREALTQVANLSGLHSVKNKPEAQLIEEIIADISKDLYSVPLKDAPNLVAV 199

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I E+ESLLC+ S  V  + IWG+GGI K T+A A++ +IS  FEG  F  NV E   
Sbjct: 200 DSCIRELESLLCLPSMDVRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNV-EHLA 258

Query: 217 TGGIKDLQKKLLSELSKDGNMR-NIESQLNRLARKKVRIVFDDVT--------------- 260
           + G   L+K+LLS++ +D N+   I S   R   KKV IV D+V                
Sbjct: 259 SKGDDYLRKELLSKVLRDKNIDVTITSVKARFHSKKVLIVIDNVNHRSILKTLVGELDWF 318

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
              SR+IITTRDK VL     +  Y +++L    A +LF   AF         +EL+ + 
Sbjct: 319 GPQSRIIITTRDKHVLTMHGVDVIYEVQKLQDDKAIELFNHHAFINHPPTEDVMELSQRV 378

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YAQG+PLAL+VLG  LC +SK+ WE A+ KLE IP +EI +VL+ S+D LDD QKN+F
Sbjct: 379 IAYAQGLPLALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKVLQTSFDELDDDQKNIF 438

Query: 380 LDIACF---LEGEHRDEVISIFDAS----------KSLI-NLDLFYRIRMHDLLRDMGRE 425
           LDIA F   +E +   E+++ F  S          KSLI NLD    + MHDLL +MG+E
Sbjct: 439 LDIAIFFNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIGNLD--DELHMHDLLIEMGKE 496

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ S   PGKR RLW  +DI  VL+KNTGT+ +E I  +++ + +EI   + AF  M 
Sbjct: 497 IVRRTSPKEPGKRTRLWEQQDICHVLEKNTGTDEVEVIDFNLSGL-KEICFTTEAFGNMS 555

Query: 486 KLRFLRFY----GDKNKCM---------VSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           KLR L  +     D ++C          +S      + E+R L W + PLK+L  +  ++
Sbjct: 556 KLRLLAIHESSLSDDSECSSRLMQCQVHISDDFKFHYDELRFLLWEEYPLKSLPSDFKSQ 615

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L M  + + +LW+  +        FK     ++ D K L   PD   + NL+ L+ 
Sbjct: 616 NLVYLSMTKSHLTRLWEGNK-------VFKNLKYIDLSDSKYLAETPDFSRVTNLKMLSF 668

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           +G T + ++  SLG L  + RL   N  NLE  P  +  L  L  L +S C +L+  P +
Sbjct: 669 EGCTQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFPVI 727

Query: 648 PCNLGLLSAR--NCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
              +  LS    + T++ +LP+ ++  + ++ ++L N  KL
Sbjct: 728 SQPMHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKL 768



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 39/261 (14%)

Query: 522 LKTLNICA----EKLVSLKMPCTKVEQLWDD---VQRLPSSLCTFKTPITFEIIDCKMLE 574
           L+ LN+      EK   +  P   + +L  D   +  LPSS+      +  ++ +C+ L 
Sbjct: 710 LEALNLSGCSKLEKFPVISQPMHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLL 769

Query: 575 RLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
            LP    +L +LE L++ G +    P+              N+ NL+ +P  +  LS L 
Sbjct: 770 SLPSSICKLAHLETLSLSGCSRLGKPQV-------------NSDNLDALPRILDRLSHLR 816

Query: 632 FLFISHCERLQTLPELPCNLGLLSAR-NCTSLEKLP--AGLSSMSSVLYVNLCNFLK--- 685
            L +  C  L+ LP LP ++ L++A  NCTSLE +   +        ++ N     K   
Sbjct: 817 ELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFLCFGGSIFGNCFQLTKYQS 876

Query: 686 -LDPN---ELSEIVKDGWMK--HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTR 739
            + P+     +   +D W       Y    +  S  FPG+ IP WF H S G    +   
Sbjct: 877 KMGPHLRRMATHFDQDRWKSAYDQQYPNVQVPFSTVFPGSTIPDWFMHYSKGHEVDIDV- 935

Query: 740 PPRPAGYN-KLISFAFCAVVV 759
              P  Y+   + FA  AV+ 
Sbjct: 936 --DPDWYDSSFLGFALSAVIA 954


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 287/726 (39%), Positives = 402/726 (55%), Gaps = 82/726 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL   L  K I TFID++ L RG  +S +L+  IE S  +II
Sbjct: 15  YDVFLSFRGEDTRNNFTAHLCEELHTKGINTFIDEEKLERGQAVSAALVSAIENSMFSII 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY VDPS VR     FG   ++  +  
Sbjct: 75  VLSENYASSRWCLEELVKIIQCMKNSGHRVLPIFYNVDPSDVRNHMGKFGEALAKHEENS 134

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E M+R   WK+ALT+  + SG+DS   + ES LI++I  D+L +L +T  S  + LVG+
Sbjct: 135 KEGMERVQIWKDALTQVTNFSGWDSRN-KNESLLIKQIVKDILNKLLSTSSSDIENLVGI 193

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+E+++LLC+ S+ V  + IWG+GGI K T+  AV+++IS  FEG  F  NV E  +
Sbjct: 194 DARIQEMKTLLCLASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDLK 253

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             G+  LQ+KLLS L   ++ NM+ + S   RL  KKV IV D+V               
Sbjct: 254 KKGLIGLQEKLLSHLLEEENLNMKELTSIKARLHSKKVLIVLDNVNDPTILECLIGNQDW 313

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GS +IITTRDK++L +   N  Y++ +    +A +   +++   + L    +EL+  
Sbjct: 314 FGRGSTIIITTRDKRLLLSHKINL-YKVHKFNDDEALEFLARYSLKHELLREDFLELSRV 372

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I YAQG+PLAL VLG +L   SKE W   + KL+ IP+++I EVLKISYD LD  +KN+
Sbjct: 373 VICYAQGLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIHEVLKISYDGLDFEEKNI 432

Query: 379 FLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACFL+GE ++ V  I D             A KSLI+     RI MHDL+++MG E
Sbjct: 433 FLDIACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISF-FHNRIMMHDLIQEMGME 491

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ES N PG+R+RLW HKDI   LKKNT    IEGI LD++     I  ++ AF +M 
Sbjct: 492 IVRQESHN-PGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDFSTQAFPRMY 550

Query: 486 KLRFLRFY---------GD---KNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICA 529
           KLR L+ Y         GD   K  C V     + F   E+R+L      LK+L  +  A
Sbjct: 551 KLRLLKVYESNKISRNFGDTLNKENCKVHFSPKLRFCYDELRYLYLYGYSLKSLDNDFNA 610

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
           + LV L M  + + +LW  ++ L   L       +  +I+     R+P    NLE L ++
Sbjct: 611 KNLVHLSMHYSHINRLWKGIKVL-EKLKVVDLSHSKSLIETPDFSRVP----NLERLVLE 665

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           G  ++ ++  SLG L+ +  L L N   L+ +P S+  L  L    +S C RL+  PE  
Sbjct: 666 GCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENF 725

Query: 649 CNLGLL 654
            NL +L
Sbjct: 726 GNLEML 731



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 148/401 (36%), Gaps = 136/401 (33%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE--------------------------L 580
            + ++ LPSS+C  K+  TF +  C  LE  P+                           L
Sbjct: 692  EKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLL 751

Query: 581  ENLEYLTVKG-----TTIRELPE-----------------SLGRLSW------------- 605
             NLE L+ KG     +T   LP                  SL RL+              
Sbjct: 752  RNLEILSFKGCRGPPSTSWLLPRRSSSSTGSILHHLSGLYSLTRLNLGYCNLSDETNLSS 811

Query: 606  ------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
                  ++ L LS N N   +P +IR LS L  L +  C+RLQ LPELP ++  L A++C
Sbjct: 812  LCLLSSLEVLGLSGN-NFVTLP-NIRGLSSLEGLLLEKCKRLQILPELPSSIYSLIAQDC 869

Query: 660  TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS--EIVKDGWMKHSLYEERGIKKSMYFP 717
             SLE      ++ + VL         L P   S  +  K     H +Y        +   
Sbjct: 870  ISLE------NASNQVLK-------SLFPTAKSPKKTFKCNSGAHLIY--------VMVY 908

Query: 718  GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL------ISFAFCAVVVFPAFLKYFRHKS 771
            G+ IP W R+QS G        PP     N L      +++ F + V+ P     +  + 
Sbjct: 909  GSRIPDWIRYQSSGCEVEADL-PPNWYNSNLLGLALSFVTYVFASNVIIPV---SYTLRY 964

Query: 772  GEDDWDGNVYAVCCDWKRKSEGHLY----------SWFLGK-ISYVESDHVFLGCNSFGG 820
                +  N  ++ CD +     H++          +W  G  I++ E  H+ +   SFG 
Sbjct: 965  STSSYIANRISIRCDKEGVGLDHVWLLYIKLPLFSNWHNGTPINWHEVTHISV---SFGT 1021

Query: 821  EYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            +  G               +PP      +K+CG   VY+ D
Sbjct: 1022 QVMG--------------WYPP------IKRCGFDLVYSND 1042


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 297/815 (36%), Positives = 426/815 (52%), Gaps = 134/815 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT HLH  L  K I TF+DDQL RG+ IS +LL  IE S  +III
Sbjct: 22  YDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQISPALLNAIEESRFSIII 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY ++PSHV+KQ+ SF   F++  + + 
Sbjct: 82  FSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNLNPSHVKKQTGSFAEAFAKHEQEYR 141

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           EKM++   W+ ALTE A +SG+DS   R ESKLIEEI  D+  +L  T  S  KGLVG+E
Sbjct: 142 EKMEKVVKWREALTEVATISGWDSRD-RHESKLIEEIVRDIWNKLVGTSPSYMKGLVGME 200

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E ++SLL + S+ V  + IWG+ GI K TIA  ++ +I   FEG  F  NVRE    
Sbjct: 201 SRLEAMDSLLSMFSDDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYK 260

Query: 218 GGIKDLQKKLLSELSKDGN------MRNIESQLNRLARKKVRIVFDDVTS---------- 261
            G+  LQ +LLS++ K+         + I    + L  +KV I+ DDV            
Sbjct: 261 HGLPYLQMELLSQILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGY 320

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTRD+ +L     +  Y +KEL   +A KLFC +AF   H      +L
Sbjct: 321 NNWFGLGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQL 380

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
              A+ Y  G+PLALKVLG  L  +    WES + KL+  P+ E++ VLK S++ LDD++
Sbjct: 381 CGHALDYTSGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGLDDNE 440

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           +N+FLDIA F +G  +D V  I D+              KSLI +    ++ MHDLL++M
Sbjct: 441 QNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISE-NKLCMHDLLQEM 499

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR++S   PG+R+RL  H+DI  VL  NTGTEA+EGI LD+++ ++E++ +  AF+
Sbjct: 500 GWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSE-SKELNFSIDAFT 557

Query: 483 KMPKLRFLRFYG---DKNKCMVSHLEGVPFA---------------------------EV 512
           KM +LR L+      D++   +S  E + +                             +
Sbjct: 558 KMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNL 617

Query: 513 RHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDC 570
           R L W   PLK+   N   EKLV L M  ++++QLW+  +        F+   + ++   
Sbjct: 618 RDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKK-------GFEKLKSIKLSHS 670

Query: 571 KMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
           + L + PD   + NL  L +KG T++ E+  S+G L  +  L L     L+    SI H+
Sbjct: 671 QHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HM 729

Query: 628 SKLTFLFISHCERLQTLPELPCN--------------------------LGLLSARNCTS 661
             L  L +S C +L+  PE+  N                          L LL+ + C S
Sbjct: 730 ESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKS 789

Query: 662 LEKLPAGLSSMSSVLYVNLCNF--LKLDPNELSEI 694
           LE LP  +  + S+  + LC    LK  P++L  +
Sbjct: 790 LESLPRSIFKLKSLKTLTLCGCSELKELPDDLGSL 824



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 162/377 (42%), Gaps = 86/377 (22%)

Query: 522  LKTLNICAEKLVSLKMPCTKVEQLWDD----------------VQRLPSSLCTFKTPITF 565
            LKTL +C          C+++++L DD                +Q +P S+         
Sbjct: 803  LKTLTLCG---------CSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKL 853

Query: 566  EIIDCKMLE------------------RLPD--ELENLEYLTVKGTTIRE--LPESLGRL 603
             +  CK  +                  RLP    L +L  L ++   + E  LP  LG +
Sbjct: 854  SLAGCKGGDSKSRNMVFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSI 913

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
              ++RL LS NS +  IP S+  LS+L  L + +C+ LQ+LPELP ++  L+A +CTSLE
Sbjct: 914  PSLERLDLSRNSFIT-IPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLE 972

Query: 664  KLPAGLSSMSSV----LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK------- 712
                   + +S     L  N  N  +L  N+ S+IV  G +   +     I K       
Sbjct: 973  TFSCSSGAYTSKKFGDLRFNFTNCFRLGENQGSDIV--GAILEGIQLMSSIPKFLVPWGI 1030

Query: 713  -------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFL 764
                   +   PG+ IP+WFRHQS+G S  ++  PP    YN KL+  AFCA + F   +
Sbjct: 1031 PTPHNEYNALVPGSRIPEWFRHQSVGCSVNIEL-PPH--WYNTKLMGLAFCAALNFKGAM 1087

Query: 765  KYFRHKSGEDDWDGNVYAVCC---DWKRKSEGH-LYSWFLGKISYVESDHVFLGCNSFGG 820
                   G    + + + + C   D   ++  H LY+   G   ++ESDH      S   
Sbjct: 1088 ------DGYPGTEPSSFGLVCYLNDCFVETGLHSLYTPLEGS-KFIESDHTLFEYISLAR 1140

Query: 821  EYFGPNYDEFSFRIHCS 837
            E +     + SFR H +
Sbjct: 1141 ERW---RMQLSFRHHVA 1154



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 5/117 (4%)

Query: 570 CKMLERLPDELENLEYL---TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C  L++ P+   N+E+L   +++GT I+ LP S+  L+ +  L L    +LE +P SI  
Sbjct: 740 CSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFK 799

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLC 681
           L  L  L +  C  L+ LP+   +L  L+  N   + ++++P  ++ ++++  ++L 
Sbjct: 800 LKSLKTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLA 856


>gi|251748502|gb|ACT11053.1| TIR-NB-LRR resistance protein [Arachis diogoi]
          Length = 1095

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 330/1023 (32%), Positives = 495/1023 (48%), Gaps = 199/1023 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF+ F G+D R+   SHL   L  K I TF+D +L +G  ISQ LL  IE S I++++
Sbjct: 59   FGVFIGFSGKDIREGLLSHLAKALRQKQIFTFVDTKLEQGGEISQELLQAIEKSLISLVV 118

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
            FSE YA S W                      FYRV+PSHVR Q   F   F++  +RF 
Sbjct: 119  FSENYAFSTWRLDELVKIMECRREKGQIVLPVFYRVEPSHVRHQKGVFSTAFAKQERRFG 178

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             EK + W++A  EAA++SGF S     +++LIEEI   V  RL    Q  +KGL G+  S
Sbjct: 179  KEKAQTWRSAFQEAANISGFHSAKFGNDAELIEEIIQSVNTRLKNMRQFSSKGLFGIAKS 238

Query: 160  IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
            I  +ESLL    E V  + IWG+GG  KIT++  V+N +   +E   F  NVRE     G
Sbjct: 239  ISRVESLLRQEPESVRVIGIWGMGGFGKITVSEVVYNLLRDEYESVVFLRNVREVSLRHG 298

Query: 220  IKDLQKKLLSELSKDGNMRNIESQL-----NRLARKKVRIVFDDVT-------------- 260
            I  L+ +L S+L  +    + ++ L      R+ R KV IV DDV               
Sbjct: 299  IIYLKNELFSKLLGENLEIDTQNGLPTYVEKRIGRMKVLIVLDDVNQSEQFEILVGTPQS 358

Query: 261  --SGSRVIITTRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDH-LDASHIELT 316
              SGSR+I+TTRD+QVL K   AN  Y+++ L   +A +LF   AF  +  ++  +  L 
Sbjct: 359  FGSGSRIIVTTRDRQVLAKYAHANDTYKVEPLESDEALQLFNLIAFQQNEVVEKEYRALA 418

Query: 317  DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            ++ + +A+G+PL LK LG     + K +WES + KL  IP+ ++ +++++SYD LD  +K
Sbjct: 419  ERVVDHAKGIPLVLKTLGHLPHEKEKWIWESELEKLGKIPNKKVFDMMRLSYDELDRQEK 478

Query: 377  NVFLDIACFLEG------------EHRD----------EVISIFDASKSLINLDLFYRIR 414
            ++ LDIACF +G            +H D          E IS    SK  +       + 
Sbjct: 479  SMLLDIACFFDGMKLKVKYLESLLKHGDFPVPAALKRLEDISFITISKEDV-------VT 531

Query: 415  MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN-RE 473
            MHD++++M  EIVR+ESI  PG  +R+W+ +DIYQVLK N G+EAI  I+   +K   R 
Sbjct: 532  MHDIVQEMAWEIVRQESIEDPGNYSRIWNPEDIYQVLKNNQGSEAIRSINFSYSKATVRN 591

Query: 474  IHMNSYAFSKMPKLRFLRFYGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            + ++   FSKM KLRFL FYG+++       L+ +P + +R+L W   PLK+L     AE
Sbjct: 592  MQLSPQVFSKMSKLRFLDFYGERHLLHFPEGLQQLP-SRLRYLRWTYYPLKSLPKKFSAE 650

Query: 531  KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT--------------FEIID------- 569
            KLV L++P ++VE+LW  +Q L  +L   K P +               EI+D       
Sbjct: 651  KLVILELPYSQVEKLWYGIQNL-VNLKVLKAPYSSQLKEFPDLSKATNLEILDFKYCLRL 709

Query: 570  --------------------CKMLERLPDE--LENLEYLT-------------------- 587
                                C  L +L     L++L YL+                    
Sbjct: 710  TRVHPSVFSLNKLETLDLSWCSQLAKLETNAHLKSLRYLSLYHCKRLNKFSVISENMTEL 769

Query: 588  -VKGTTIRELPESLGRLSWVKRLILSNNSNLERIP-ESIRHLSKLTFLFISHCERLQTLP 645
             ++ T+IRELP S G  S +++L L+ NS ++++P +S++ L+ L +L IS C+ LQTLP
Sbjct: 770  DLRHTSIRELPSSFGCQSKLEKLHLA-NSEVKKMPADSMKLLTSLKYLDISDCKNLQTLP 828

Query: 646  ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN-----LCNFLKLDPNELSEIVKDGWM 700
            ELP ++  L A NCTSL+ +     + S  L  N       N LKL+   L+ +  + ++
Sbjct: 829  ELPLSIETLDADNCTSLKAV--LFPNASEQLKENKKKAVFWNCLKLENQFLNAVALNAYI 886

Query: 701  KHSLYEERGI---------------KKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
                +  + +               + S  +P +++P W  +Q+     T+       A 
Sbjct: 887  NMVRFSNQYLSAIGHDNVDNSNEDPEASYVYPRSKVPNWLEYQTNMDHLTVNL---SSAP 943

Query: 746  YNKLISFAFCAVVVFPAF----LKYFRHKSGEDDWDGNVYAV--CCDWKRKSEGHLYSWF 799
            Y   + F  C +V  PA      +     SG+D  + +V  V    D  RK      SW 
Sbjct: 944  YAPKLGFILCFIV--PAVPSEGFRLMFTISGDDQEEDDVNEVRLYVDRPRKE----ISW- 996

Query: 800  LGKISYVESDHVFL----GCNSFGGEYFGPNYDEFSFRIH-CSFHFPPYLERGEVKKCGI 854
                     DHV L     C+SF     G N   F+ ++   S          E+K  G+
Sbjct: 997  ---------DHVILIYDQRCSSFLNNR-GQNRRMFNIKVSVVSLSMTSEYVAVELKGFGV 1046

Query: 855  HFV 857
            H V
Sbjct: 1047 HPV 1049


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 278/794 (35%), Positives = 420/794 (52%), Gaps = 127/794 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR NFTSHLH  L  KSI+TFIDD+L RG+ I+ +LL  +E S IA+II
Sbjct: 16  YDVFLSFRGADTRQNFTSHLHFALCRKSIRTFIDDELSRGEQITPALLEVVEESRIAVII 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ Y SS +                      FY VDP  V  Q+ SF   F++      
Sbjct: 76  FSKNYGSSTFCLDEVAKIIECNETHRQTVVPVFYHVDPLDVENQTGSFETAFAKHEIHNF 135

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           ++++RWK AL++AA ++G+DS VIR ES+L+E I  D+L++L   +    +GLVG++  I
Sbjct: 136 DRVQRWKAALSKAASMAGWDSKVIRMESQLVENIVRDILEKLKQAYPCDLEGLVGIKSRI 195

Query: 161 EEIESLLCIGSEGVCKLR--------------IWGIGGISKITIAGAVFNKISRHFEGSY 206
            EI++LL   ++    +R              IWG+GGI K T+A AVF+ I+  FEG  
Sbjct: 196 GEIKALLFAENQKSNSIRASISTKPLDVRVLGIWGMGGIGKTTLAKAVFSDIACQFEGRC 255

Query: 207 FALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVT 260
           F  +VR+  E      + K+LLS++S++ +++  ++ +       R+  + V ++ DDV 
Sbjct: 256 FLPSVRKFFEKDDGYYIIKELLSQISRESDVKISKTDILCSPFVKRMLNRNVLVIIDDVN 315

Query: 261 S----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG 304
           S                GSR+I+T+RD+Q+L    A+  Y +K+L Y +A +LF Q AF 
Sbjct: 316 SPQQLDFFAENRNWFGTGSRIIVTSRDRQILLGS-ADDIYEIKKLGYNEAQQLFSQNAFK 374

Query: 305 GDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
                   I L+   I+YA G+PLALKVLG  L GR++  W+S + KL   P+ ++  +L
Sbjct: 375 KTFPPEGLIALSHSYIQYANGIPLALKVLGSNLFGRTERKWKSTLEKLRQAPNKDVLNIL 434

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHR-DEVISIFDA---SKSLINLDLFYR-------- 412
           K+SYD LD  +K +FL +  F   + + DEV  I D    S  ++  DL  +        
Sbjct: 435 KVSYDGLDKEEKEIFLHVVSFFSRKKKIDEVTQILDGCGFSTEVVLCDLVDKSLITISDN 494

Query: 413 -IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            I +HDLL  MG EIVR+ES   PG+ +RLW H+DI +VL +N GTEAIE I LDM+K++
Sbjct: 495 TIAIHDLLHAMGMEIVRQES-TEPGEWSRLWDHEDILRVLTRNAGTEAIEAIFLDMSKID 553

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKN---------KCMVSHLEGVPFAEVRHLEWPQCPL 522
             I +N   F++M  L+ LRFY D N         K  +S       +++++L W   P 
Sbjct: 554 EIIDLNPNVFARMSNLKLLRFY-DPNFDSRELKDIKVRLSRGLDSLSSKLQYLYWNGYPS 612

Query: 523 KTL--NICAEKLVSLKMPCTKVEQL-WDD------------------------------- 548
           KTL  N   + LV L +P +K+++L W +                               
Sbjct: 613 KTLPANFHPKDLVELHLPSSKLKRLPWKNMDLKKLKEIDLSWSSRLTTVPELSRATNLTC 672

Query: 549 --------VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL 600
                   ++R PS++    +  T  + DC  LER PD   ++ +L + GT I E+P S+
Sbjct: 673 INLSDSKRIRRFPSTI-GLDSLETLNLSDCVKLERFPDVSRSIRFLYLYGTAIEEVPSSV 731

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RN 658
           G LS +  L L + + L+ +P SI  +  L  L +S C  L+  PE+   +  L     +
Sbjct: 732 GCLSRLVSLNLFDCTKLKSLPTSICKIKSLELLCLSGCTNLKHFPEISETMDCLVELYLD 791

Query: 659 CTSLEKLPAGLSSM 672
            T++  LP  + ++
Sbjct: 792 GTAIADLPLSVENL 805



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 18/177 (10%)

Query: 528 CAEKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL 586
           C  +LVSL +  CTK++ L       P+S+C  K+     +  C  L+  P+  E ++ L
Sbjct: 733 CLSRLVSLNLFDCTKLKSL-------PTSICKIKSLELLCLSGCTNLKHFPEISETMDCL 785

Query: 587 T---VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
               + GT I +LP S+  L  +  L LSN  NL  +PESI  L  L+ L  S C +L+ 
Sbjct: 786 VELYLDGTAIADLPLSVENLKRLSSLSLSNCRNLVCLPESISKLKHLSSLDFSDCPKLEK 845

Query: 644 LP-ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN--ELSEIV 695
           LP EL  +L L+ AR C  L KL + LS +S + +++L    F  L P+  +LS+++
Sbjct: 846 LPEELIVSLELI-ARGC-HLSKLASDLSGLSCLSFLDLSKTKFETLPPSIKQLSQLI 900



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 1/105 (0%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP S+   K   + +  DC  LE+LP+EL     L  +G  + +L   L  LS +  L L
Sbjct: 822 LPESISKLKHLSSLDFSDCPKLEKLPEELIVSLELIARGCHLSKLASDLSGLSCLSFLDL 881

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           S  +  E +P SI+ LS+L  L IS C+RL++LP+L  +L  + A
Sbjct: 882 SK-TKFETLPPSIKQLSQLITLDISFCDRLESLPDLSLSLQFIQA 925


>gi|357468503|ref|XP_003604536.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505591|gb|AES86733.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1088

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 303/910 (33%), Positives = 450/910 (49%), Gaps = 160/910 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGED R NF SHL      K IK F+DD+L RGD I QSL+  IE S I++II
Sbjct: 72  YDVFVSFRGEDIRANFLSHLIEDFDRKKIKAFVDDKLKRGDEIPQSLVRAIEGSLISLII 131

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YASS W                      FY+VDP+ VR Q+ S+   F  L++ + 
Sbjct: 132 FSHDYASSCWCLEELVTTLQCREKYGQIVIPIFYQVDPTDVRYQNKSYDNAFVELQRGYS 191

Query: 101 E-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K++ W++AL ++A+LSG  S+  R + +L++EI   V   L+      +KGL+G+   
Sbjct: 192 STKVQIWRHALNKSANLSGIKSSDFRNDVQLLKEIIKCVSINLNNKQLVSSKGLIGIGKQ 251

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
              ++SLL   SE V  + IWG+GGI K T+A  VF+++   +EG  F  N+RE     G
Sbjct: 252 TAHLKSLLSQESEDVRVVGIWGMGGIGKTTLAEEVFHQLQSEYEGCCFLENIREESAKHG 311

Query: 220 IKDLQKKLLSELSKDGNMRNIESQL-----NRLARKKVRIVFDDVTS------------- 261
           +  L++KL+S L  +    +I ++L      R+ R KV IV DDV               
Sbjct: 312 MVFLKEKLISALLDEVVKVDIANRLPHYVKTRIRRMKVLIVLDDVNDFDQLEILFGDHDL 371

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITTRDKQ+L     +    +  L Y  + +LF   AF G  L+  + EL+ +
Sbjct: 372 FGFGSRIIITTRDKQMLSKD-VDDILEVGALDYDKSLELFNLNAFKGKELEIEYNELSKR 430

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YA+G+PL LKVL   + G+ K VWES + KL  +P  ++++V+++SYD LD  ++ +
Sbjct: 431 VVNYAKGIPLVLKVLAHLVRGKDKLVWESQLDKLRKMPSKKVQDVMRLSYDDLDREEQKI 490

Query: 379 FLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDLLRD 421
           FLDIACF  G               E  + V S  +    K L+++     I MH +++D
Sbjct: 491 FLDIACFFNGSNLKVDYLKLLWKDSESDNSVASGLERLKDKDLVSVSKHNVISMHGIIQD 550

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGREIVR+ES   PG R+RLW   DIY+VLK + GTE I  I + +  + R + ++   F
Sbjct: 551 MGREIVRQESSGDPGSRSRLW-DDDIYEVLKNDKGTEEIRSIWMPLPTL-RNLKLSPSTF 608

Query: 482 SKMPKLRFL---RFYGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           SKM  L+FL     Y      ++ H L  +P  E+R+L W   PLK+L     AEKLV L
Sbjct: 609 SKMRNLQFLYVPNVYDQDGFDLLPHGLHSMP-PELRYLCWMHYPLKSLPDEFSAEKLVIL 667

Query: 536 KMPCTKVEQLWDDVQ-------------RLPSSLCTFKTPITFEIID------------- 569
            +  ++VE+LW  VQ             R    L  F   +  E++D             
Sbjct: 668 DLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKALNLEVLDIHFCGQLTSVHPS 727

Query: 570 -------------------------------------CKMLERLPDELENLEYLTVKGTT 592
                                                CK + +     EN+  L ++ T 
Sbjct: 728 IFSLENLEKLDLSHCTALTELTSDTHSSSLRYLSLKFCKNIRKFSVTSENMIELDLQYTQ 787

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           I  LP S GR + ++ L L N S +ER P   ++L +L +L I +C +LQTLPELP +L 
Sbjct: 788 INALPASFGRQTKLEILHLGNCS-IERFPSCFKNLIRLQYLDIRYCLKLQTLPELPQSLE 846

Query: 653 LLSARNCTSLEKL--PAGLSSMSSVLY-VNLCNFLKLDPNELSEIVKDGWMKHSLYEERG 709
           +L AR CTSLE +  P+         Y V   N LKLD + L+ I  +  + +  +  + 
Sbjct: 847 VLHARGCTSLESVLFPSIPEQFKENRYRVVFANCLKLDEHSLANIAFNAQINNMKFACQH 906

Query: 710 IK--------------------KSMY-FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
           +                     +++Y +PGN +P+WF +  M ++  +          + 
Sbjct: 907 VSALEHDFHNKFNDYKDHNDSYQAIYVYPGNSVPEWFEY--MTTTDYVVIDLSSSTSSSP 964

Query: 749 LISFAFCAVV 758
           L+ F FC V+
Sbjct: 965 LLGFIFCFVL 974


>gi|356524185|ref|XP_003530712.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 882

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 268/753 (35%), Positives = 411/753 (54%), Gaps = 97/753 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FTSHL+  L+   ++T+IDD+L +G+ IS +L   IE S ++I+I
Sbjct: 25  YDVFLSFRGEDTRRSFTSHLYESLNEVKVQTYIDDRLEKGEEISPTLTKAIENSRVSIVI 84

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS+W                      FY +DPSHVRKQ+ S+ + F +      
Sbjct: 85  FSENYASSKWCLGELIKIMESKKEKGQIVIPVFYNIDPSHVRKQTGSYEQAFEKHEGE-- 142

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            +  +WK ALTEAA L+GFDS   R + +L+++I   VL++L   +Q++ KGL+G+E   
Sbjct: 143 PRCNKWKTALTEAAGLAGFDSRNYRTDPELLKDIVGAVLRKLPPRYQNQRKGLIGIEDHC 202

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           ++IESLL IGS  V  L IWG+GGI K T+A  +++K+S  FE + F  N+ E  +    
Sbjct: 203 KQIESLLKIGSSEVKTLGIWGMGGIGKTTLATTLYDKLSHKFEDACFLANLSEQSDKPKN 262

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------------------G 262
           +      ++      N+  ++   +RL  KKV I+ DDVT+                  G
Sbjct: 263 RSFGNFDMA------NLEQLDKNHSRLQDKKVLIILDDVTTSEQLDKIIPDFDCDFLGPG 316

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SRVI+TTRDKQ+L     ++ Y + E  +  + +LFC  AFG    +  + +L+   + Y
Sbjct: 317 SRVIVTTRDKQILSR--VDEIYPVGEWSFDKSLQLFCLTAFGEKQPNDGYADLSRMVVSY 374

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
            +G+PLALKVLG  L  RSKE+WE  +RKL+ IP+ EI +VLK+SYD LD S++++FLDI
Sbjct: 375 CKGIPLALKVLGASLRSRSKEIWECELRKLQKIPNKEIHKVLKLSYDGLDRSEQDIFLDI 434

Query: 383 ACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           ACF +G  R  V  + +A              K+LI +     I MHDL+++MGREIV +
Sbjct: 435 ACFFKGRDRCWVTRVLEAFEFFPAPGINILLDKALITISDSNLILMHDLIQEMGREIVHQ 494

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           ES   PG+R RLW H++++ VLK N GT+ +EGISLD++++N +++++S + +KM  LRF
Sbjct: 495 ES-KDPGRRTRLWRHEEVHDVLKYNKGTDVVEGISLDLSRLNEDLNLSSNSLAKMTNLRF 553

Query: 490 LRFYGDK-------NKCMVSHLEGVPFA-EVRHLEWPQCPLKTLNICAEKL--------- 532
           LR  G+        N  + + LE +  + +V  L +P      L      +         
Sbjct: 554 LRIDGESWLSDRIFNGYLPNGLESLYLSNDVEPLYFPGLESLVLYFPNGHVSSYLPNGLE 613

Query: 533 --------VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL--EN 582
                   VSL +P   +E L+      PS L +    + +   D   LE LP     E 
Sbjct: 614 SFYFLDGPVSLYLP-NGLESLY-----FPSGLESLSNQLRYLHWDLCYLESLPPNFCAEQ 667

Query: 583 LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           L  L +K + +++L + +  L  +K + LS + +L  IP ++     L  + +S C+ L 
Sbjct: 668 LVVLHMKFSKLKKLWDGVQNLVNLKEIDLSYSEDLIEIP-NLSEAENLESISLSGCKSLH 726

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
            L     +L  +    C+SL++       M+ +
Sbjct: 727 KLHVHSKSLRAMELDGCSSLKEFSVTSEKMTKL 759



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 50/235 (21%)

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA--------EVRHLEWPQCPLKTL- 525
           H++SY  + +    FL   G  +  + + LE + F         ++R+L W  C L++L 
Sbjct: 603 HVSSYLPNGLESFYFLD--GPVSLYLPNGLESLYFPSGLESLSNQLRYLHWDLCYLESLP 660

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRLPS-----------------------------S 555
            N CAE+LV L M  +K+++LWD VQ L +                             S
Sbjct: 661 PNFCAEQLVVLHMKFSKLKKLWDGVQNLVNLKEIDLSYSEDLIEIPNLSEAENLESISLS 720

Query: 556 LCT--------FKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            C          K+    E+  C  L+      E +  L +  T I EL  S+G L  ++
Sbjct: 721 GCKSLHKLHVHSKSLRAMELDGCSSLKEFSVTSEKMTKLNLSYTNISELSSSIGHLVSLE 780

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
           +L L   +N+E +P +I++LS LT L +  C +L +LPELP +L LL    C  L
Sbjct: 781 KLYL-RGTNVESLPANIKNLSMLTSLRLDGCRKLMSLPELPPSLRLLDINGCKKL 834


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 295/873 (33%), Positives = 450/873 (51%), Gaps = 148/873 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SF G D R +F SHL      + I  F+D ++++GD +S++LL  IE S I++II
Sbjct: 53  YDVFVSFSGADIRQDFLSHLVEGFYRRQIHAFVDYKILKGDQLSEALLDAIEGSLISLII 112

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY+VDPS+VR Q  ++G  F++   R  
Sbjct: 113 FSENYASSHWCLFELVKIVECRKKDGQILLPIFYKVDPSNVRYQKGTYGDAFAKHEVRHN 172

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
              M+ W++AL E+A+LSGF S+  R E++L++EI   V  RL+   Q  +KGLVGV   
Sbjct: 173 LTTMQTWRSALNESANLSGFHSSTFRDEAELVKEIVKCVSLRLNHVHQVNSKGLVGVGKR 232

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I  +ESLL + +  V  + IWG+GGI K TIA  V+NK+   +EG  F  N+RE     G
Sbjct: 233 IAHVESLLQLEATDVRVIGIWGMGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHG 292

Query: 220 IKDLQKKLLSELSKDGNMR----NIESQL--NRLARKKVRIVFDDVTS------------ 261
           I  L+KKL S L  + +++    N   Q    RL R KV I+ DDV              
Sbjct: 293 IISLKKKLFSTLLGEEDLKIDTPNGLPQYVERRLRRIKVLIILDDVNDSEQLEILAGTRD 352

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRDKQVL    AN  Y ++ L + ++ +LF   AF   HL+  + EL+ 
Sbjct: 353 WFGLGSRIIITTRDKQVLAKESAN-IYEVETLNFDESLRLFNLNAFKEVHLEREYHELSK 411

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           K + YAQG+PL LKVLG  L G+ KE+WES + +L+ +   ++ +++K+SY+ LD  +K 
Sbjct: 412 KVVNYAQGIPLVLKVLGHLLHGKEKEIWESQLERLKKVQSKKVHDIIKLSYNDLDQDEKK 471

Query: 378 VFLDIACFLEG-------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDLLRDM 422
           +FLDIACF +G             +H   V +  +    K+LI++     + MH+++++ 
Sbjct: 472 IFLDIACFFDGLNLKVNKIKILLKDHDYSVAAGLERLKDKALISVSQENIVTMHNIIQET 531

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
             +I R+ESI  P  ++RL    D+Y VLK N G EAI  I ++++ + +++ +N   F+
Sbjct: 532 AWQIARQESIEDPRSQSRLLDPDDVYLVLKYNKGNEAIRSIVINLSGI-KQLQLNPQVFA 590

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFA---------EVRHLEWPQCPLKTL--NICAEK 531
           KM KL FL FY +K  C     +G  +          E+R+L W   PL++L     AE 
Sbjct: 591 KMSKLYFLDFY-NKGSCSCLREQGGLYLPQGLESLSNELRYLRWTHYPLESLPSKFSAEN 649

Query: 532 LVSLKMPCTKVEQLWDDV-----------------QRLPS------------SLCTFKTP 562
           LV L +P ++V++LW  V                 + LP               C   T 
Sbjct: 650 LVELNLPYSRVKKLWQAVPDLVNMRILILHSSTQLKELPDLSKATNLKVMDLRFCVGLTS 709

Query: 563 ITFEIIDCKMLERL-------------PDELENLEYLTVKG------------------- 590
           +   +   K LE+L                L++L YL++ G                   
Sbjct: 710 VHPSVFSLKKLEKLYLGGCFSLRSLRSNIHLDSLRYLSLYGCMSLKYFSVTSKNMVRLNL 769

Query: 591 --TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
             T+I++LP S+G  S +++L L+  + +E +P SI+HL+KL  L + HC  L+TLPELP
Sbjct: 770 ELTSIKQLPSSIGLQSKLEKLRLA-YTYIENLPTSIKHLTKLRHLDVRHCRELRTLPELP 828

Query: 649 CNLGLLSARNCTSLEKL----PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            +L  L AR C SLE +     AG     +   V   N LKLD + L  I  +  +    
Sbjct: 829 PSLETLDARGCVSLETVMFPSTAGEQLKENKKRVAFWNCLKLDEHSLKAIELNAQINMMK 888

Query: 705 YEERGI-------KKSMYFPGNEIPKWFRHQSM 730
           +  + +       + +  +PG+++P+W  H+++
Sbjct: 889 FAHQHLSTFGDAHQGTYVYPGSKVPEWLVHKTI 921


>gi|147858652|emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]
          Length = 1241

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 310/866 (35%), Positives = 441/866 (50%), Gaps = 121/866 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR+NFT HL+  L  K I+TF+DD+ +R G+ IS +L+  I+ S  +II
Sbjct: 79  YAVFLSFRGEDTRNNFTGHLYKALDQKGIETFMDDKKLRTGEEISPTLVTAIQRSRCSII 138

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS+W                      FY VDPSHVR Q+ SFG   ++ ++  
Sbjct: 139 VLSENYASSKWCLEELVMILECKRTKNLKVVPIFYNVDPSHVRNQTGSFGEALAKHKENL 198

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               EK+++W+ ALT+ A+LSG  S   +PE++LIEEI  D+ K L +        LV V
Sbjct: 199 KIKVEKVQKWREALTQVANLSGLHSVKNKPEAQLIEEIIADISKDLYSVPLKDAPNLVAV 258

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I E+ESLLC+ S  V  + IWG+GGI K T+A A++ +IS  FEG  F  NV E   
Sbjct: 259 DSCIRELESLLCLPSMDVRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNV-EHLA 317

Query: 217 TGGIKDLQKKLLSELSKDGNMR-NIESQLNRLARKKVRIVFDDVT--------------- 260
           + G   L+K+LLS++ +D N+   I S   R   KKV IV D+V                
Sbjct: 318 SKGDDYLRKELLSKVLRDKNIDVTITSVKARFHSKKVLIVIDNVNHRSILKTLVGELDWF 377

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
              SR+IITTRDK VL     +  Y +++L    A +LF   AF         +EL+ + 
Sbjct: 378 GPQSRIIITTRDKHVLTMHGVDVIYEVQKLQDDKAIELFNHHAFINHPPTEDVMELSQRV 437

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YAQG+PLAL+VLG  LC +SK+ WE A+ KLE IP +EI +VL+ S+D LDD QKN+F
Sbjct: 438 IAYAQGLPLALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKVLQTSFDELDDDQKNIF 497

Query: 380 LDIACF---LEGEHRDEVISIFDAS----------KSLI-NLDLFYRIRMHDLLRDMGRE 425
           LDIA F   +E +   E+++ F  S          KSLI NLD    + MHDLL +MG+E
Sbjct: 498 LDIAIFFNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIXNLD--DELHMHDLLIEMGKE 555

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ S   PGKR RLW  +DI        GT+ +E I  +++ + +EI   + AF  M 
Sbjct: 556 IVRRTSPKEPGKRTRLWEQQDICH------GTDEVEVIDFNLSGL-KEICFTTEAFGNMS 608

Query: 486 KLRFLRFYGDKN-----------KCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAE 530
           KLR L  +               +C V   +   F   E+R L W + PLK+L  +  ++
Sbjct: 609 KLRLLAIHESSXSDDSECSSRLMQCQVHISDDFKFHYDELRXLXWEEYPLKSLPSDFKSQ 668

Query: 531 KLVSLKMPCTKVEQLWDDVQ--------RLPSSLCTFKTPITFEIIDCKML--ERLPDEL 580
            LV L M  + + +LW+  +         L  S    +TP    + + K L  E LP  +
Sbjct: 669 NLVFLSMTKSHLTRLWEGNRVFKNLKYIDLSDSKYLAETPDFSRVXNLKXLXFEELPSSI 728

Query: 581 ENLEYLTV----KGTTIRELPESLGRLSWVKRLILS----------NNSNLERIPESIRH 626
                L V        +  LP S+ +L+ ++ L LS          N+ NL+ +P  +  
Sbjct: 729 AYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCSRLGKPQVNSDNLDALPRILDR 788

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSAR-NCTSLEKLP--AGLSSMSSVLYVNLCNF 683
           LS L  L +  C  L+ LP LP ++ L++A  NCTSLE +   +        ++ N    
Sbjct: 789 LSHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFLCFGGSIFGNCFQL 848

Query: 684 L----KLDPN---ELSEIVKDGWMK--HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
                K+ P+     +   +D W       Y    +  S  FPG+ IP WF H S G   
Sbjct: 849 TKYQSKMGPHLXRMATHFDQDRWKSAYDQQYPNVQVPFSTVFPGSTIPDWFMHYSKGHEV 908

Query: 735 TLKTRPPRPAGYN-KLISFAFCAVVV 759
            +      P  Y+   + FA  AV+ 
Sbjct: 909 DIDV---DPDWYDSSFLGFALSAVIA 931


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 292/778 (37%), Positives = 437/778 (56%), Gaps = 98/778 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R  F SHL   L  K +  ++DD+L  GD IS++L+  IE S +++II
Sbjct: 14  YDVFISFRGTDIRHGFLSHLRKELRQKQVDAYVDDRLEGGDEISKALVKAIEGSLMSLII 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS+W                      FY V+P+ VR Q  ++G   ++  K   
Sbjct: 74  FSKDYASSKWCLEELVKIVECMARNKQVVIPVFYNVNPTDVRHQKGTYGDSLAKHEKNKG 133

Query: 101 E--KMKRWKNALTEAADLSGFDSNV-----------IRPESKLIEEIANDVLKRLDATFQ 147
              K++ W +ALT AA+LSGF S+            +  E +LIEEI   +  +L+  +Q
Sbjct: 134 SLAKVRNWGSALTIAANLSGFHSSKYGREARGRGAELADEVELIEEIVKCLSSKLNLMYQ 193

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSY 206
           S+   LVG+E  I ++ESLLC+ S   V  + IWG+GGI K T+A AV+N++   +EGS 
Sbjct: 194 SELTDLVGIEERIADLESLLCLDSTADVLVIGIWGMGGIGKTTLAAAVYNRLCFEYEGSC 253

Query: 207 FALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLN-------RLARKKVRIVFDDV 259
           F  N+ E  E  G+  L+ K+LS L K+ ++ +I + +        RLARKKV +V DD+
Sbjct: 254 FMANITEESEKHGMIYLKNKILSILLKENDL-HIGTPIGVPPYVKRRLARKKVLLVLDDI 312

Query: 260 T----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF 303
                            SGSR+I+TTRDKQVL     N  Y  K L   DA KLF   AF
Sbjct: 313 NDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGK-RVNCTYEAKALQSDDAIKLFIMNAF 371

Query: 304 GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEV 363
               LD   IEL+ + I YA G PLALKVLG +L G+SK  WES ++KL+ +PH +I+ V
Sbjct: 372 EHGCLDMEWIELSRRVIHYANGNPLALKVLGSFLYGKSKIEWESQLQKLKKMPHAKIQNV 431

Query: 364 LKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFYR--------- 412
           L++SYD LD  +KN+FL IAC L+G    ++I++ DA    ++I L +            
Sbjct: 432 LRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFSTIIGLRVLKDKALIIEAKG 491

Query: 413 -----IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM 467
                + MHDL+++MG EIVR+E +  PGKR+RLW   D++QVL  NTGT+AI+ I+L++
Sbjct: 492 SGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNV 551

Query: 468 NKVNREIHMNSYAFSKMPKLRFLRF---YGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLK 523
           +K + E+H++   F +M +L+FL+F   YGD+    +   LE +P  ++   +W   PLK
Sbjct: 552 SKFD-ELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLP-NDLLLFQWVSYPLK 609

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--E 579
           +L  + CAE LV LK+  ++VE+LWD +Q +       K  +++     K L  LPD  +
Sbjct: 610 SLPQSFCAENLVELKLTWSRVEKLWDGIQNIQH---LKKIDLSYS----KYLLDLPDFSK 662

Query: 580 LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
             NLE + + G  ++  +  S+ RL+ + RL L     L  +  S  HL  L  LF+S C
Sbjct: 663 ASNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSL-RSDTHLRSLRDLFLSGC 721

Query: 639 ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
            RL+       N+  L A + T++ +LP+ + S+ ++  L ++ C  L   PNE+ ++
Sbjct: 722 SRLEDFSVTSDNMKDL-ALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDL 778



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 159/379 (41%), Gaps = 74/379 (19%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTT------------- 592
            +  LPSS+ + K   T  +  CK L +LP+E   L +L  L V G T             
Sbjct: 744  INELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSG 803

Query: 593  --------------IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
                          + E+P+++  LS   R +L   +++ER P SI+HLSKL  L +  C
Sbjct: 804  LASLETLKLEECRNLSEIPDNISLLS-SLRELLLKETDIERFPASIKHLSKLEKLDVKGC 862

Query: 639  ERLQTLPELPCNLGLLSARNCTSLEKLPAG------LSSMSSVLYVNLCNFLKLDPNELS 692
             RLQ +PELP +L  L A +C+SLE +         L   +  L+    N + LD   L 
Sbjct: 863  RRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNLDELSLR 922

Query: 693  EIVKDGW--MKHSLYEERGIKKSMY--------FPGNEIPKWFRHQSMGSSATLK-TRPP 741
             I  +    MK   Y       S +        +PG+++P+W  +++  +S T+  +  P
Sbjct: 923  AIEVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVPEWLMYRTTEASVTVDFSSAP 982

Query: 742  RPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLYSWFL 800
            +    +K + F FC V          +  S + ++ G + Y    + ++ S G + +W  
Sbjct: 983  K----SKFVGFIFCVVA--------GQLPSDDKNFIGCDCYLETGNGEKVSLGSMDTWTS 1030

Query: 801  GKISYVESDHVFLG----CNSFGGEYFGPNYDEF--SFRIHCSFHFPPY-------LERG 847
               S   SDH+F+     C     +    N DE   S+    SF F           E  
Sbjct: 1031 IHSSEFFSDHIFMWYDELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGNTWKKRENN 1090

Query: 848  EVKKCGIHFVYAQDSADHI 866
             ++ CG+  +Y  +  D I
Sbjct: 1091 MIRGCGVCPIYDTEYFDFI 1109


>gi|357462141|ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1545

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 339/1047 (32%), Positives = 508/1047 (48%), Gaps = 218/1047 (20%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
            +DVF+SF GEDT   FTSHL+  LS K I TFIDD +L +GD IS +L+  IE S  +I+
Sbjct: 457  FDVFISFCGEDTGRKFTSHLYEALS-KKIITFIDDNELEKGDEISSALIKAIEDSSASIV 515

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS---RLR 96
            IFS+ YASS+W                      FY +DPSHVR Q+ S+G+ F+   R  
Sbjct: 516  IFSKDYASSKWCLNELVKILECKKDQGQIVIPIFYEIDPSHVRNQNGSYGQAFAKHARDL 575

Query: 97   KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK-NKGLVG 155
            K+  E +K+WK+ALTEAA+L+G+ S   R ES  I++I  DVLK+L+  +  + N  LVG
Sbjct: 576  KQNKEMLKKWKDALTEAANLAGWHSQNYRIESNFIKDIVEDVLKKLNRRYPFEVNMQLVG 635

Query: 156  VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
            +E   EE ESLL I S  V  L +WG+GGI K T+A  ++ K+   FE   F  NVRE  
Sbjct: 636  IEKKYEETESLLKILSNDVRSLGLWGMGGIGKTTLAKDLYAKLCSQFERHCFLENVREES 695

Query: 216  ETGGIKDLQKKLLSEL---SKDGNMRNIESQLNRLARKKVRIVFDDVTS----------- 261
               G+   + KL S L    +D           RLA +K   V DDVT+           
Sbjct: 696  TGHGLNGSRNKLFSTLLGIPRDAPYVETPIFRRRLACEKSLTVLDDVTTLEQVEILNIDN 755

Query: 262  -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                 GSR+I+TTRDKQ+         Y ++ L   ++ ++FC  AF   +    +  L+
Sbjct: 756  ICLGPGSRIIVTTRDKQICNQFNECAIYEVEGLNEDESLEVFCLEAFREKYPKIGYRGLS 815

Query: 317  DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
             +AI Y  G PLALKVLG     +SKE WES + KL+ IP+  I +VLK+S+D LD +Q+
Sbjct: 816  KRAIGYCGGNPLALKVLGANFRTKSKEAWESELEKLKKIPNGRIHDVLKLSFDDLDRTQQ 875

Query: 377  NVFLDIACFLEGE-----HRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
             +FLDIACF   E      RDE+ ++ +A              K+L+ ++ + ++ MHDL
Sbjct: 876  EIFLDIACFFNLELHACFGRDEITTLLNACNFFAVSGIEVLLYKALLTIEHYDQVTMHDL 935

Query: 419  LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
            L +MGREIVRKES+  PG R+RLW  K++Y +LK N GTE +E I  D+     +++++S
Sbjct: 936  LVEMGREIVRKESLKDPGSRSRLWDPKEVYDLLKYNKGTEVVEVIFFDICDFG-DLYLSS 994

Query: 479  YAFSKMPKLRFLRFYGD---------KNKCMVSHL-EGVPFA--EVRHLEWPQCPLKTL- 525
             +F  M  LR+L              +N+  + HL EG+ +   ++R+L+W   PL +L 
Sbjct: 995  ASFKSMTNLRYLHILNSLHNIFLTNGRNEGSIVHLHEGLEWLSDKLRYLKWESFPLNSLP 1054

Query: 526  -NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENL 583
             + CAE LV L M  +K+++LWD +Q+L  +L   +   + ++++   L R P+ EL +L
Sbjct: 1055 ASFCAENLVQLSMTNSKLKKLWDGIQKL-DNLMKIELDYSKDLVEIPDLSRAPNLELVSL 1113

Query: 584  EY---LTVKGTTIRELPE-SLGRLSWVKR---------------LILSNNSNL------- 617
             Y   L     +I   P+ S  RL   K+               L L+N S+L       
Sbjct: 1114 SYCENLCKLHESILTAPKLSYLRLDGCKKIKSLKTNIHSKSLESLSLNNCSSLVEFSVTS 1173

Query: 618  -------------ERIPESIRHLSKLTFLFISHCERL----QTLPELP-------CNLG- 652
                         + +P S+    KLT L +S C++L    + LP  P       C+L  
Sbjct: 1174 ENMTGLYLSCTAIQELPSSMWRNRKLTHLNLSKCKKLNIAEKNLPNDPGLESLIFCDLSG 1233

Query: 653  --------------------LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNE 690
                                 L   NC +LE LP  + ++S + ++ L  C  LK  P +
Sbjct: 1234 CTQINTWNLWFIFHFIRSVKHLRMVNCCNLESLPDNIQNISMLEWLCLDECRKLKFIP-K 1292

Query: 691  LSEIVKDGWMKHSLYEERG-IKKSM-----------------------YFPGNEIPKWFR 726
            L   +++    + +Y + G +++SM                       + PG++IP  F 
Sbjct: 1293 LPVSLRNLSAANCIYVDTGSVQRSMLENMIQRHLTNFRDRSNCFQEFFFLPGDQIPCEFY 1352

Query: 727  HQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCD 786
             QS  +S  +   PP P   + L    FC  ++F   L +F +             +CC 
Sbjct: 1353 FQSTEASIVI---PPIPK--SDLCCLIFC--IIFSEGLTFFYNN------------LCCT 1393

Query: 787  -WKRKSEGHLYSWFLGKISYVESDHVFLGC-------NSFGGEYFGPNYDEFSFRIHCSF 838
             ++ K E H +    G    + SDHV + C          G E    +Y+     +   F
Sbjct: 1394 IYQHKKEVHQWDTNWGNERTLFSDHVLIICWCHYNKLVELGSERGSDDYN-----LTFEF 1448

Query: 839  HFPPYLERGE-------VKKCGIHFVY 858
                Y++  E       +K CG+  VY
Sbjct: 1449 KLKEYVDDEEQWSTIEGIKGCGVFPVY 1475



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 81/169 (47%), Gaps = 50/169 (29%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRGE TR NFT HL+  LS K I    D  L +GD IS SL+  IE S  +I+I
Sbjct: 157 FDVFISFRGEGTRRNFTGHLYDALSKKVIIFMDDGDLEKGDEISSSLIKAIEESYTSIVI 216

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-------- 92
           FS+ YASS+W                      F+ ++PS VR Q  SFG  F        
Sbjct: 217 FSKDYASSKWCLNELVKILECKKDLGQIVIPVFFGINPSDVRFQLGSFGEAFLKHEQDLQ 276

Query: 93  ---SRLRK------------------RFPEKMKRWKNALTEAADLSGFD 120
              S L K                     +K+++WK+AL E A+L+G D
Sbjct: 277 LSRSNLHKWKDVLTGQTFIKREQDLEHSKDKLQKWKDALFEVANLAGSD 325



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 5/103 (4%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+ F GEDTR  FTSHL+  L    ++TF+DD +L +GD IS +L+  IE S  +I+
Sbjct: 22  FDVFIDFCGEDTRSKFTSHLNEALKRSGVRTFVDDSELEKGDEISSALIKAIEESDASIV 81

Query: 61  IFSERYASSRW----FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ Y          FY +DPSHVR Q  S+ + F++ ++  
Sbjct: 82  IFSKDYKDQGQIVIPIFYEIDPSHVRNQIGSYKQAFAKNKQNL 124


>gi|357449443|ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
 gi|355484046|gb|AES65249.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 287/776 (36%), Positives = 419/776 (53%), Gaps = 90/776 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG+DTR  FTSHL+  L    +KTFIDD +L +GD IS +L+  IE SC +I+
Sbjct: 124 FDVFISFRGDDTRRKFTSHLNEALKKSGVKTFIDDSELKKGDEISSALIKAIEESCASIV 183

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSE YASS+W                      FY +DPSHVR Q  S+G+ F++  K  
Sbjct: 184 IFSEDYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRNQIGSYGQAFAKHEKNL 243

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK-NKGLVGVEC 158
             K ++WK+ALTE ++LSG+DS   R ES  I++I  DVL++L+     + NK LVG+E 
Sbjct: 244 --KQQKWKDALTEVSNLSGWDSKSSRIESDFIKDIVKDVLEKLNQRRPVEANKELVGIEK 301

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
             EEIE L   GS  V  L +WG+GGI K  +A  +++     FE   F  NVRE     
Sbjct: 302 KYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYHCFLENVREESTKC 361

Query: 219 GIKDLQKKLLSELSKDG-NMRNIESQL--NRLARKKVRIVFDDVTS-------------G 262
           G+K ++KKL S L K G +    E+ +   RL R K  IV DDV +             G
Sbjct: 362 GLKVVRKKLFSTLLKLGHDAPYFENPIFKKRLERAKCLIVLDDVATLEQAENLKIGLGPG 421

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SRVI+TTRD Q+           +K+L   ++ +LF   AF   H    + EL+  AI Y
Sbjct: 422 SRVIVTTRDSQICHQFEGFVVREVKKLNEDESLQLFSCNAFQEKHAKEGYEELSKSAIGY 481

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
            +G PLALKVLG  LC +SKE WES + K++ IP+  I +VLK+S+  LD +Q+++FLDI
Sbjct: 482 CRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDVLKLSFYDLDRTQRDIFLDI 541

Query: 383 ACFLEG--------EHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRD 421
           ACF             R+ +I +F+A              KSL+      RI+MHDL+ +
Sbjct: 542 ACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHKSLMTFGYCDRIQMHDLVVE 601

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGREIV++E+   PGKR+RLW  + IY+V K N GT+A+E I  D +K+  +++++S +F
Sbjct: 602 MGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIG-DVYLSSRSF 660

Query: 482 SKMPKLRFLRFYGDKNKCMVSHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLK 536
             M  LR L      NKC   HL EG+ +   ++ +L W   PL++L    C +KLV L 
Sbjct: 661 ESMINLRLLHI---ANKCNNVHLQEGLEWLSDKLSYLHWESFPLESLPSTFCPQKLVELS 717

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK-GTTIRE 595
           M  +K+ +LWD +Q+L  +L   K   + ++I+   L R P    NL+ L++    ++ +
Sbjct: 718 MTHSKLRKLWDRIQKL-DNLTIIKLDNSEDLIEIPDLSRAP----NLKILSLAYCVSLHQ 772

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           L  S+     ++ L L   + +E +   I   S LT L ++ C  L         +  LS
Sbjct: 773 LHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLT-LDLTDCSSLVQFCVTSEEMTWLS 831

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
            R  T        +   SS++  N     KLD  +LS+  K  ++   L  +RG++
Sbjct: 832 LRGTT--------IHEFSSLMLRN----SKLDYLDLSDCKKLNFVGKKLSNDRGLE 875



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 149/370 (40%), Gaps = 94/370 (25%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            CTK+E L  D+          K+ +T ++ DC  L +     E + +L+++GTTI E   
Sbjct: 791  CTKIESLVTDIHS--------KSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSS 842

Query: 599  SLGR--------LSWVKRL-----ILSNNSNLERIPESIRHLS----------------- 628
             + R        LS  K+L      LSN+  LE +  SI +LS                 
Sbjct: 843  LMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESL--SILNLSGCTQINTLSMSFILDGA 900

Query: 629  -KLTFLFISHCERLQTLPELPCNLGLLS------ARNCTSLEKLPAGLSSMSSVLYVNLC 681
              L FL++ +C  L+TLP+   N  +LS        N  SL KLPA L  +S++      
Sbjct: 901  RSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAI------ 954

Query: 682  NFLKLDPNELSEIVKDGWMKHSLYEER-GIKKSMYF----PGNEIPKWFRHQSMGSSATL 736
            N   LD N     ++   +K+ LY  R G     YF    P  E+P  F   +  +S  +
Sbjct: 955  NCTYLDTNS----IQREMLKNMLYRFRFGEPFPEYFLSLLPVAEVPWGFDFFTTEASIII 1010

Query: 737  KTRPPRPA-GYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL 795
               PP P  G N+++   F +  +   F       SG D         C  +      + 
Sbjct: 1011 ---PPIPKDGLNQIVLCVFLSEGLNLTF-------SGVD---------CTIYNHGDRSNE 1051

Query: 796  YSW-FLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE------ 848
            +S  F+     + SDHV L C+         + D +S     SF   PY + GE      
Sbjct: 1052 WSISFVNVSGAMISDHVLLICSPAICHQTRVDNDHYSL----SFEVKPYGKVGEQLSSTK 1107

Query: 849  -VKKCGIHFV 857
             +K CG+  V
Sbjct: 1108 GIKGCGVILV 1117


>gi|359493210|ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 992

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 333/983 (33%), Positives = 507/983 (51%), Gaps = 160/983 (16%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFL+FRG DTR +FT HL+  L    ++TF DD+ L RGD I+  LL  IE S I+I
Sbjct: 12  IYDVFLNFRGADTRYHFTDHLYSELRKNDVRTFRDDEELERGDVIAPGLLKAIEQSRISI 71

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR---- 94
           ++FSE YA SRW                      FY VDPSHVRKQ  S+G  F+     
Sbjct: 72  VVFSENYAQSRWCLDELVKIIECRTEREQIVLPVFYHVDPSHVRKQMGSYGEAFADHEKD 131

Query: 95  --LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
             L+KR  EK+++W+ ALTE ++LSG+     + ES +I++I N+++ RL+       + 
Sbjct: 132 ADLKKR--EKIQKWRTALTETSNLSGWRLLDNQYESDVIDDITNNIITRLNPKSLHVGEN 189

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +VG+   ++++ SL+ I    V  + I GIGGI K TIA A++N IS  FEG  F  NVR
Sbjct: 190 IVGMSIRLKKLRSLINIDLNNVLVVGICGIGGIGKTTIAKALYNVISYKFEGVSFLANVR 249

Query: 213 E-AEETGGIKDLQKKLLSELSKDGNMR--NIESQLNR----LARKKVRIVFDDVTS---- 261
           E +++  G+  LQ++LL ++ K  N +  N+   ++     L+ K+V +V DDV +    
Sbjct: 250 ENSKDDVGLLRLQQQLLDDIRKRKNQQISNVHEGMDAIKKVLSLKRVLVVLDDVDNCKQV 309

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKY-RMKELVYADAHKLFCQWAFGGDHL 308
                       GSR++ITTRD+  L    A+K Y  ++EL   +A +LF  +AF  +  
Sbjct: 310 ENLVGKRDCFVRGSRILITTRDRHPLDAYGADKPYHEIEELNSEEALQLFSLYAFKPNCH 369

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              + +L++  +KYA+G+PL L+VLG +LC R+   W+S + KLE  P  +I+ VLKISY
Sbjct: 370 QEDYEDLSNHIVKYAKGLPLVLRVLGSHLCERTPNQWKSELHKLEREPVQDIQNVLKISY 429

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           + LD +Q  +FLDIACF +G+ +D V  I D               +SLI + L  +I M
Sbjct: 430 NGLDRTQGEIFLDIACFFKGQDKDFVSRILDGCDLYAESGFSVLCDRSLITI-LDNKIHM 488

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++ MG  IVR++    PGK +RLW  KD++ VL +NTGT+AIEGI LDM+  ++++ 
Sbjct: 489 HDLIQQMGWHIVREQYPKEPGKWSRLWEPKDVFHVLTRNTGTKAIEGIFLDMS-TSKQLQ 547

Query: 476 MNSYAFSKMPKLRFLRFYGD-KNKCMVSHLEGV------------------PFAEVRHLE 516
             + AF +M  LR L+ + D K   +V+ L  V                  P  E+R+L 
Sbjct: 548 FTTKAFKRMKMLRLLKVHRDAKYDSIVNSLTPVEPSKVLLSQEHFCRDFEFPSQELRYLH 607

Query: 517 WPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKM 572
           W   P+++L  N  AE LV L + C+ ++QLW+   +++L             ++  C+ 
Sbjct: 608 WDGYPMESLPSNFYAENLVELNLRCSNIKQLWETELLEKLK----------VIDLSHCQH 657

Query: 573 LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           L ++P+   + NLE LT+KG   +  LPE++G +  +++L L N + +  +P SI HL  
Sbjct: 658 LNKIPNPSSVPNLEILTLKGCINLETLPENMGNMENLRQLYL-NYTAILNLPSSIEHLKG 716

Query: 630 LTFLFI---SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
           L +L +   S C +L+ LPE   +L  L      SL  L   L S+S          L  
Sbjct: 717 LEYLSLECFSCCSKLEKLPE---DLKSLKRLETLSLHGLNCQLPSVSGPSSF-----LPS 768

Query: 687 DPNELSEIVKDGWMKHSL-----YEERGIKKSMYFPG-NEIPKWFRHQSMGSSATLKTRP 740
             +E  ++V     +  L     Y E G+  S++FPG + IP+W   ++MG+  T+   P
Sbjct: 769 SFSEFQDLVCGSSFQLYLDDSYSYFEEGV--SIFFPGISGIPEWIMGENMGNHVTIDL-P 825

Query: 741 PRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEG------H 794
                    + FA C+  V P            DD  GN  A   D K K E       H
Sbjct: 826 QDWYEDKDFLGFALCSAYVPP------------DDQSGNGSAYKFDSKSKDEDQSPCSLH 873

Query: 795 LYSWFLGKIS----YVESDHVFLGCNSFG--GEYFGPNYDEFSF----------RIHCSF 838
               F G  S    Y     +   C + G  G+ +   Y +F+           R+  SF
Sbjct: 874 CNLTFHGDQSAFSIYPSLSSLCECCENDGASGQVWVLYYPKFAIEEKYHSNKWGRLKASF 933

Query: 839 HFPPYLERGEVKKCGIHFVYAQD 861
           H        +V+KCG+  +YA++
Sbjct: 934 HGYFNGMPMKVEKCGMQLIYAKN 956


>gi|147815446|emb|CAN68384.1| hypothetical protein VITISV_018351 [Vitis vinifera]
          Length = 940

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 289/741 (39%), Positives = 402/741 (54%), Gaps = 100/741 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL   L  K I TFID++ L RG  +S +L+  IE S  +II
Sbjct: 16  YDVFLSFRGEDTRNNFTAHLCEELHTKGINTFIDEEKLERGQAVSAALVSAIENSMFSII 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY VDPS VR     FG   ++  +  
Sbjct: 76  VLSENYASSRWCLEELVKIIQCMKNSGHRVLPIFYNVDPSDVRNHMGKFGEALAKHEENS 135

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E M+R   WK+ALT+  + SG+DS   + ES LI++I  D+L +L +T  S  + LVG+
Sbjct: 136 KEGMERVQIWKDALTQVTNFSGWDSRN-KNESLLIKQIVKDILNKLLSTSSSDIENLVGI 194

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+E+++LLC+ S+ V  + IWG+GGI K T+  AV+++IS  FEG  F  NV E  +
Sbjct: 195 DARIQEMKTLLCLASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDLK 254

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             G+  LQ+KLLS L   ++ NM+ + S   RL  KKV IV D+V               
Sbjct: 255 KKGLIGLQEKLLSHLLEEENLNMKELTSIKARLHSKKVLIVLDNVNDPTILECLIGNQDW 314

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GS +IITTRDK++L +   N  Y++ +    +A +   +++   + L    +EL+  
Sbjct: 315 FGRGSTIIITTRDKRLLLSHKINL-YKVHKFNDDEALEFLARYSLKHELLREDFLELSRV 373

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I YAQG+PLAL VLG +L   SKE W   + KL+ IP+++I EVLKISYD LD  +KN+
Sbjct: 374 VICYAQGLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIHEVLKISYDGLDFEEKNI 433

Query: 379 FLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACFL+GE ++ V  I D             A KSLI+     RI MHDL+++MG E
Sbjct: 434 FLDIACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISF-FHNRIMMHDLIQEMGME 492

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ES N PG+R+RLW HKDI   LKKNT    IEGI LD++     I  ++ AF +M 
Sbjct: 493 IVRQESHN-PGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDFSTQAFPRMY 551

Query: 486 KLRFLRFY---------GD---KNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICA 529
           KLR L+ Y         GD   K  C V     + F   E+R+L      LK+L  +  A
Sbjct: 552 KLRLLKVYESNKISRNFGDTLNKENCKVHFSPKLRFCYDELRYLYLYGYSLKSLDNDFXA 611

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYL 586
           + LV L M  + + +LW  ++  P SL          + +C+ L+ LP    +L++LE  
Sbjct: 612 KNLVHLSMHYSHINRLWKGIKVHP-SLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETF 670

Query: 587 TVKGTT-IRELPESLGRLSWVKRLI---LSNNSNL---------ERIPESIRHLSKLTFL 633
            + G + + + PE+ G L  +K L    +  NS            RIP+ IR+ S     
Sbjct: 671 ILSGCSRLEDFPENFGNLEMLKELHADGIPRNSGAHLIYVMVYGSRIPDWIRYQS----- 725

Query: 634 FISHCERLQTLPELPCNLGLL 654
             S CE    LP    N  LL
Sbjct: 726 --SGCEVEADLPPNWYNSNLL 744


>gi|255556649|ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223541425|gb|EEF42975.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 324/1034 (31%), Positives = 496/1034 (47%), Gaps = 198/1034 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
            Y VFLSFRG DTR NFT HL+  L    I TF DD  I RG+NI   +   I  S I+++
Sbjct: 22   YHVFLSFRGGDTRKNFTDHLYTALIQAGIHTFRDDDEIKRGENIESEIKNAIRESKISVL 81

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASSRW                      FY  DP+ V KQ  S+G  F R  K F
Sbjct: 82   VLSKDYASSRWCLDELAMIMERRRTDGHIVVPVFYDADPTEVGKQIGSYGEAFERHEKVF 141

Query: 100  PEKMKR---WKNALTEAADLSGFDSNVI--RPESKLIEEIANDVLKRLDATFQSKNKGLV 154
             E+M+    W+ AL E AD+ G    V+  R +S+ I+ I  +V  +L+    +    LV
Sbjct: 142  KEEMEMVEGWRAALREVADMGGM---VLENRHQSQFIQNIVKEVGNKLNRVVLNVASYLV 198

Query: 155  GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
            G++  I +I S L   S+ V    I+G+GGI K T+A  +FN+    F+G+ F  NVRE 
Sbjct: 199  GIDSRIADINSWLQDDSKDVGIATIYGVGGIGKTTLAKIIFNQNFDKFDGASFLANVRET 258

Query: 214  AEETGGIKDLQKKLLSEL--SKDGNMRNIESQL----NRLARKKVRIV---------FDD 258
            +E++ G+  LQ+K+LS+L   K   + N++  +    + + R++V ++         F+ 
Sbjct: 259  SEQSNGLVRLQRKVLSDLLKGKTSKIYNVDEGIIKIKDAICRRRVLLILDDLDQLDQFNS 318

Query: 259  VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
            +         GS++I TTR +++L+    +K +R+ EL   ++ +LF   +FG DH    
Sbjct: 319  IIGMQEWFFPGSKIIATTRHERLLRAHEVSKLFRVNELDSNESLQLFSWHSFGQDHPVEV 378

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
              + + +A+    G+PLAL+VLG  L G+S EVWESA++KLE +P  +I+++L++SYDSL
Sbjct: 379  FEQQSKRAVDLCSGLPLALQVLGSSLSGKSIEVWESALQKLEAVPDSKIQKILRVSYDSL 438

Query: 372  -DDSQKNVFLDIACFLEGEHRDEVISIFDASK-------------SLINLDLFYRIRMHD 417
             DD  KN+FLDIACF  G  ++ VISI    K              L+ ++   ++ +H 
Sbjct: 439  EDDHDKNLFLDIACFFTGMEKNYVISILQGCKFYAVVGINNLIGRCLLTINEGNKLIIHQ 498

Query: 418  LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR-EIHM 476
            LLRDMGREIVR+ES   PGKR+R+W  KD + +L++NTGTE ++G++LD+  +      +
Sbjct: 499  LLRDMGREIVRQESPEDPGKRSRVWRDKDAFNLLRENTGTETVKGLTLDLQMLKEANTDL 558

Query: 477  NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             + AF +M KL+ LR    K   +    E  P   V  L W   PL+ +  N   +KL  
Sbjct: 559  KTKAFGEMNKLKLLRLNCVK---LSGDCEDFPKGLV-WLFWRGFPLRCIPNNFHLDKLAV 614

Query: 535  LKMPCTKVEQLWDDVQ--------RLPSSLCTFKTP------------------------ 562
            L M  + +  +W   +         L  S C  KTP                        
Sbjct: 615  LDMRKSSLINVWKGTRLLVALKILNLSHSHCLVKTPNFMGLPSLERLKLKDCVNLIDLDE 674

Query: 563  --------ITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLSWVKRLI 610
                    I  ++  C+ ++RLP E   LE+LE L + G + + +LPE + ++  +K L 
Sbjct: 675  SIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQLPEEMRKMQSLKVLY 734

Query: 611  LSNNSNLE-------------------------RIPESIRHLSKLTFLFISHCERLQTLP 645
               + NL                           IPESI  L+ L +L +  C RLQ+LP
Sbjct: 735  ADADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLP 794

Query: 646  ELPCNLGLLSARNCTSLEK---LPAGLSSMSSVLY-----VNLCNFLKLDPNELSEI-VK 696
            +LP +L  L A  CTSLE+   LP  LS++   L+     V +    KL+P    +I + 
Sbjct: 795  QLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGCGQLVEVQGLFKLEPTINMDIEMM 854

Query: 697  DGWMKHS-------------------------LYEERGIKKSMYFPGNEIPKWFRHQSMG 731
            +G   H+                         + +E GI  S +  GNE+P WF H+S G
Sbjct: 855  NGLGLHNFSTLGSSEMKMFSAIANREMRSPPQVLQECGI-VSFFLAGNEVPHWFDHKSTG 913

Query: 732  SSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKS 791
            SS +    P   + Y K+     C V      + Y+ H +G        YA   +  + +
Sbjct: 914  SSLSFTINP--LSDY-KIRGLNLCTVYARDHEV-YWLHAAGH-------YARMNNETKGT 962

Query: 792  EGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKK 851
                   F       + D ++L    FGGE+   +    S R+   ++         VK+
Sbjct: 963  NWSYSPTFYALPEDDDEDMLWLSYWKFGGEFEVGDKVNVSVRMPFGYY---------VKE 1013

Query: 852  CGIHFVYAQDSADH 865
            CGI  VY ++  D+
Sbjct: 1014 CGIRIVYEENEKDN 1027


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 297/793 (37%), Positives = 426/793 (53%), Gaps = 112/793 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L  K ++TF DD+ L RG  I+  LL  IE S I+++
Sbjct: 17  YDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRISVV 76

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           +FS+ YA S W                      FY VDP+HVRKQ+ SF   F+   +  
Sbjct: 77  VFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFASHGEDT 136

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E+ KRW+ ALT+AA+LSG+       ESKLI++I  ++L +L       +K LVGV 
Sbjct: 137 EVIERAKRWRAALTQAANLSGWHLQN-GYESKLIKKIIEEILSKLSRKLLYVDKHLVGVS 195

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++EI   + I S  V  + I GIGG+ K TIA  V+N IS  FEG  F  N+RE  + 
Sbjct: 196 SRLKEILLRVSIESNDVRMVGICGIGGVGKTTIAKVVYNLISSQFEGISFLANIREVSKN 255

Query: 218 GGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS---------- 261
            G+  LQK+LL ++    + R       I   ++RL  KKV I+ DDV            
Sbjct: 256 CGLLPLQKQLLGDILMGWSQRISNLDEGINVLMDRLHSKKVLIILDDVDDLNQLESLAGN 315

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR++ITTRDK +L     ++ Y  KEL   +A +LF Q+AF     D  ++ L
Sbjct: 316 VDWFGIGSRIVITTRDKHLLNVHGVSEIYEAKELEPEEALQLFSQYAFKRKSPDKDYMNL 375

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +D  + YA+G+PLALKVLG +L  ++   WES + KL+   + ++++VL+IS+D LD +Q
Sbjct: 376 SDNVVHYAKGLPLALKVLGSFLFSKTILEWESELHKLKKELNTKVQDVLRISFDGLDFTQ 435

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           K +FLD+ACF +G+  D VI I D             + + LI+L L  R+ MHDL++ M
Sbjct: 436 KEIFLDLACFFKGQEYDFVIKILDGCGFHAKSGIRVLSDRCLIDL-LDNRLWMHDLIQQM 494

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+E    PGK +RLW ++ IY VLKKNTGTE IEGI LDM + ++EI   + AF+
Sbjct: 495 GWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTGTETIEGIFLDMYR-SKEIQFTTEAFA 553

Query: 483 KMPKLRFLRFY--------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           KM +LR L+ +        G K    VS     P  E+R+L W   P  +L     +E L
Sbjct: 554 KMNRLRLLKVFNFSGIGKEGYKEPLSVSF--EFPSYELRYLYWHGYPFGSLPSKFHSENL 611

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           + L M  + + +LW   + L           T E+ + + L  LP+   + NLE L ++G
Sbjct: 612 IELNMCYSYMRELWKGNEVL-------DNLNTIELSNSQHLIHLPNFSSMPNLERLVLEG 664

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
            TTI ELP S+G L+ +  L L N   L+ +P SI  L  L  L +S C +L++ PE+  
Sbjct: 665 CTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIME 724

Query: 650 NL------------------------GLLS--ARNCTSLEKLPAGLSSMSSV--LYVNLC 681
           N+                        GL+S   R+C +L  LP  + ++ S+  L V+ C
Sbjct: 725 NMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGC 784

Query: 682 NFLKLDPNELSEI 694
           + L+  P  L  +
Sbjct: 785 SKLQQLPENLGSL 797



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 147/341 (43%), Gaps = 70/341 (20%)

Query: 551  RLPS--SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
            +LPS   LC+ +     +I DC ++E                     +P  +  LS ++ 
Sbjct: 859  QLPSLSGLCSLRE---LDISDCNLMEG-------------------AVPFDICNLSSLET 896

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--P 666
            L LS N N   +P  I  LSKL FL ++HC+ L  +PELP ++  ++A+ C+SL  +  P
Sbjct: 897  LNLSRN-NFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTP 955

Query: 667  AGLSSMSSV---LYVNLCNFLKLDP-----NELS------EIVKDGWMK-HSLYEERGIK 711
            + + +   V   L   L N   LD      N+++      +IV +   K  +   + G  
Sbjct: 956  SSVCNNQPVCRWLVFTLPNCFNLDAENPCSNDMAIISPRMQIVTNMLQKLQNFLPDFGF- 1014

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLK------ 765
             S++ PG+EIP W  +Q++GS  T++  PP     N  + FA C V  F           
Sbjct: 1015 -SIFLPGSEIPDWISNQNLGSEVTIEL-PPHWFESN-FLGFAVCCVFAFEDIAPNGCSSQ 1071

Query: 766  -YFRHKSGEDDWDGNVYAV-CCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF 823
               + +S E  + G  + +   D +  SE  L           +S H++L     G    
Sbjct: 1072 LLCQLQSDESHFRGIGHILHSIDCEGNSEDRL-----------KSHHMWLAYKPRG--RL 1118

Query: 824  GPNYDEFSFR---IHCSFHFPPYLERGEVKKCGIHFVYAQD 861
              +Y +   R      SF F        V+KCGIH +YAQD
Sbjct: 1119 RISYGDCPNRWRHAKASFGFISCCPSNMVRKCGIHLIYAQD 1159


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 285/760 (37%), Positives = 408/760 (53%), Gaps = 116/760 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRGEDTR +FT HLH  L    I TFIDDQL RG+ IS +LL  IE S  +III
Sbjct: 21  YEVFLSFRGEDTRKSFTDHLHEALHRCGINTFIDDQLRRGEQISSALLQAIEESRFSIII 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ+ S+G  F++  K + 
Sbjct: 81  FSEHYASSSWCLDELTKILECVKVGGHTXFPVFYNVDPSHVRKQTGSYGVAFTKHEKVYR 140

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT A+ LSG+DS   R ESK+I+EI + +   L+       + LVG++
Sbjct: 141 DNMEKVLKWREALTVASGLSGWDSRD-RHESKVIKEIVSKIWNELNDASSCNMEALVGMD 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             IZ + SLLCIGS+ V  + IWG+ GI K TIA AV+ KI   FE  ++  N+      
Sbjct: 200 SHIZNMVSLLCIGSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFE-VFWEGNLNTRIFN 258

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT----------------S 261
            GI  ++K L S                     +V IV DDV                  
Sbjct: 259 RGINAIKKXLHS--------------------MRVLIVLDDVDRPQQLEVLAGNHNWFGP 298

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+IITTR+K +L      + Y  KEL   +A  L  Q AF         ++L D+A+ 
Sbjct: 299 GSRIIITTREKHLLDE--KVEIYEXKELNKDEARXLXYQHAFKYKPPAGXFVQLCDRALN 356

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           Y +G+PLALK+LG +L  RSK+ WES + KL  IP+ EI++VL+IS+D LDD+QK++F D
Sbjct: 357 YTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLDDNQKDIFXD 416

Query: 382 IACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF +G+ +D VI +  +              KSL+ +  + ++ MHDL+++MG EIVR
Sbjct: 417 IACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTIS-YNKLCMHDLIQEMGWEIVR 475

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           +ES   PGK +RLW + D+  +L  NTGTEA+EG+ L+++ + +E+H +   F+KM KLR
Sbjct: 476 QESXKDPGKXSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTL-KELHFSVNVFTKMNKLR 534

Query: 489 FLRFY-------------GDKNKCMVS----HLEG---VPFAEVRHLEWPQCPLKTL--N 526
             RFY              D+ K   +    HL G        +R L W   PLK+L  N
Sbjct: 535 VXRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDGYPLKSLPSN 594

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE 584
              EKL+ LKM  +++EQLW+  +       +F+     E+   + L + PD      L 
Sbjct: 595 FHPEKLLELKMCFSQLEQLWEGNK-------SFQKLKFIELSHSQHLIKXPDFSGAPKLR 647

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            + ++G T++ ++  S+G L  +  L L    NL+    SI HL  L  L +S C +L+ 
Sbjct: 648 RIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSI-HLESLQILTLSGCSKLKK 706

Query: 644 LPELPC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
            PE+     NL  LS +  T+++ LP  +  ++ +   NL
Sbjct: 707 XPEVQGAMDNLSELSLKG-TAIKGLPLSIEYLNGLALFNL 745



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 118/287 (41%), Gaps = 49/287 (17%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            LP  L  LSW++ L LS N N   +P S+  L  L  L + HC+ LQ+LPELP ++  L 
Sbjct: 938  LPSDLSSLSWLECLDLSRN-NFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELL 996

Query: 656  ARNCTSLEKL--PAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
            A +CTSLE    P+    +      N    N  +L  NE S+ V+    +  L     I+
Sbjct: 997  ANDCTSLETFSYPSSAYPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVA--SIQ 1054

Query: 712  KSM----------------YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
            KSM                  PG+ IP+WF HQS G S T++  PP     N  I  A C
Sbjct: 1055 KSMAPSEHSARYGESRYDAVVPGSRIPEWFTHQSEGDSITVEL-PPGCYNTNS-IGLAAC 1112

Query: 756  AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGC 815
            AV       K+   K G   +          +     G         + + ++DH++ G 
Sbjct: 1113 AVF----HPKFSMGKIGRSAY----------FSVNESGGFSLDNTTSMHFSKADHIWFGY 1158

Query: 816  NSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEV-KKCGIHFVYAQD 861
                G            R H    F      GEV KKCG+  VY QD
Sbjct: 1159 RLISG---------VDLRDHLKVAFATSKVPGEVVKKCGVRLVYEQD 1196



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 9/139 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LP      K+  T  + +C  L++LP+  EN+E L    +  T +RELP S+  L+ 
Sbjct: 751 LESLPGCXFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNG 810

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCTS 661
           +  L L N   L  +PESI  L+ L  L +S C  L+ LP+    L C L L +  N + 
Sbjct: 811 LVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKA--NGSG 868

Query: 662 LEKLPAGLSSMSSVLYVNL 680
           ++++P+ ++ ++ +  ++L
Sbjct: 869 IQEVPSSITLLTRLQVLSL 887


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 287/814 (35%), Positives = 421/814 (51%), Gaps = 171/814 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT+HLH  LS K I TF D  L RG+ IS +LL  IE S  +II+
Sbjct: 21  YDVFLSFRGEDTRQSFTAHLHSALSQKGINTFKDSLLPRGEKISPALLQAIEESRFSIIV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS W                      F+ VDPS+VRKQ  SF + F++  + + 
Sbjct: 81  LSENYASSSWCLEELTKILECVEEGGHTALPVFHNVDPSNVRKQEGSFAKAFAKHEQVYK 140

Query: 101 EKMK---RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           +KM+   +W++ALTEAA ++G+D+   R ES++IE+I   +L      F S    LVG++
Sbjct: 141 DKMEQVVKWRDALTEAATIAGWDTRN-RDESEVIEQIVTRILNEPIDAFSSNMDALVGMD 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +E++ S LCIGS+ V  + IWG+ GI K TIA A++++I   F+G  F  N       
Sbjct: 200 SRMEDLLSRLCIGSDDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKN------- 252

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT----------------S 261
               D+ K                    RL  K+V IV DDV                 S
Sbjct: 253 ----DIYKA-------------------RLRPKRVLIVLDDVVHRQQLEALAGNHDWFGS 289

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+IITTR+K++L     ++ Y++++L Y +A KLFCQ+AF   H     ++L   A+ 
Sbjct: 290 GSRIIITTREKRLLIEQEVDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCHHAVD 349

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           Y  G+PLALKVLG  L  +S   W+S + KL   P+ E+  VLK S+D LDD++KN+FLD
Sbjct: 350 YTGGLPLALKVLGSCLYRKSIHEWKSELDKLNQFPNKEVLNVLKTSFDGLDDNEKNMFLD 409

Query: 382 IACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           IA F +GE +D VI + D             KSLI +    ++ MHDLL++MG EIVR+E
Sbjct: 410 IAFFYKGEDKDFVIEVLDNFFPVSEIGNLVDKSLITIS-DNKLYMHDLLQEMGWEIVRQE 468

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
           SI  PGKR+RL  H+DI+ VL  N GTEA+EG+  D++  ++E++++  AF+KM KLR L
Sbjct: 469 SIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLS-ASKELNLSVDAFAKMNKLRLL 527

Query: 491 RFYG---------------------------------DKNKCMVSHLEGVPFAEVRHLEW 517
           RFY                                  + +K  +S     P   +R L W
Sbjct: 528 RFYNCQFYGSSEYLSEEELIASTRDAWRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSLHW 587

Query: 518 PQCPLKTLN--ICAEKLVSLKMPCTKVEQLWD---------------------------- 547
              PLK+L      +KLV L M  + ++QLW+                            
Sbjct: 588 HGYPLKSLPSIFHPKKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAA 647

Query: 548 ------------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLTVKGT 591
                        + +L  S+   K  I   +  C  LE+ P+     LE+L  ++++GT
Sbjct: 648 PKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGT 707

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            IRELP S+G L+ +  L L N   L  +P+SI  L  L  L +S C +L+ LP+   +L
Sbjct: 708 AIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPD---DL 764

Query: 652 GLLSAR-----NCTSLEKLPAGLSSMSSVLYVNL 680
           G L        + T ++++P+ ++ ++++  ++L
Sbjct: 765 GRLQCLVELHVDGTGIKEVPSSINLLTNLQELSL 798



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 135/331 (40%), Gaps = 67/331 (20%)

Query: 570  CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRL--ILSNNSNLERIPESIRHL 627
            CK L+ LP+   ++ YL  +  T  E           KR   +    SN  R+ E+    
Sbjct: 891  CKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGGLRLEFSNCFRLMEN--EH 948

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL----CNF 683
            S+L  L + +C+ LQ+LPELP ++  L+A  CTSLE      S+ +S  Y  L     N 
Sbjct: 949  SRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGGLRLEFSNC 1008

Query: 684  LKLDPNELSEIVK------------------------DGWMKHSLYEERGIKKSMYFPGN 719
             +L  NE ++ VK                        DG   H+LY+          PG+
Sbjct: 1009 FRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDG--PHNLYD-------AIVPGS 1059

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLKYFRHKSGEDDWDG 778
             IP+WF  QS GSS T++     P  YN KL+  A CAV+     +         ++W  
Sbjct: 1060 RIPEWFVDQSTGSSVTVEL---PPHWYNTKLMGMAVCAVIGATGVI-----DPTIEEWRP 1111

Query: 779  NVYAVCCDWKRKSEGHLYSWFLGKISYVESDHV---FLGCNSFGGEY--FGPNYDEFSFR 833
             +Y  C     + +  + S        ++ DH    +L      G    FG +      R
Sbjct: 1112 QIYFKCSSVIYQGDDAIMS------RSMKDDHTWFRYLSLCWLHGRTPPFGKS------R 1159

Query: 834  IHCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
                  F  + E+ EVKKCG+  VY  +  D
Sbjct: 1160 GSMVVSFGSWEEKLEVKKCGVRLVYEGEEKD 1190



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
           IP ++  LS+L  L + +C+ LQ+LPELP ++  L+A  CTSLE      S+ +S  Y  
Sbjct: 873 IPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGG 932

Query: 680 L----CNFLKLDPNELSEI 694
           L     N  +L  NE S +
Sbjct: 933 LRLEFSNCFRLMENEHSRL 951



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKR 608
           LP S+C   +  T  +  C  L++LPD+L  L+ L    V GT I+E+P S+  L+ ++ 
Sbjct: 736 LPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQE 795

Query: 609 LILSN 613
           L L+ 
Sbjct: 796 LSLAG 800


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 287/803 (35%), Positives = 411/803 (51%), Gaps = 141/803 (17%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRG+DTR  FT HL   L  + IKTF DD  L RG  IS  L+  IE S +A+II 
Sbjct: 23  VFLSFRGDDTRKGFTGHLFASLERRGIKTFKDDHDLQRGKLISVELMKAIEGSMLALIIL 82

Query: 63  SERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE---K 102
           S  YASS W                  F+ VDPS VR Q  SF + FS   ++F E   K
Sbjct: 83  SPNYASSTWCLDELKKILECKKEVFPIFHGVDPSDVRHQRGSFAKAFSEHEEKFREDKKK 142

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           ++RW++AL E A  SG+DS   + E+ LIE I   + K++          LVG++  ++E
Sbjct: 143 LERWRHALREVASYSGWDSKE-QHEATLIETIVGHIQKKIIPRLPCCTDNLVGIDSRMKE 201

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD 222
           + SL+ I    V  + +WG+GGI K TIA  V+  I   F  S F  N+RE  +T G+  
Sbjct: 202 VYSLMGISLNDVRFIGLWGMGGIGKTTIARFVYEAIKGDFNVSCFLENIREVSKTNGLVH 261

Query: 223 LQKKLLSELS-KDGNMRNIESQ----LNRLARKKVRIVFDDVT----------------S 261
           +QK+LL  L+ +  +  N+        N L+ KK+ +V DDV+                S
Sbjct: 262 IQKELLFHLNVRSSDFYNLHDGKNIIANSLSNKKILLVLDDVSELSQLENLAGKQEWFGS 321

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSRVIITTRDK +LK    +   + K L   +A KLFC  AF  D     ++ L  + ++
Sbjct: 322 GSRVIITTRDKHLLKTHGVHLTCKAKGLAQNEALKLFCLKAFKQDQPKEEYLNLCKEVVE 381

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           YA+G+PLAL+VLG +L GR+ EVW SA+ ++   PH +I++ LKISYDSL    + +FLD
Sbjct: 382 YARGLPLALEVLGSHLYGRTVEVWHSALEQIRSFPHSKIQDTLKISYDSLQPPYQKMFLD 441

Query: 382 IACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF +G   DEV +I                 + L+ LD   ++ MHDLL++MGR IV 
Sbjct: 442 IACFFKGMDIDEVKNILKNCGYHPEIGIDILIERCLVTLDRMKKLGMHDLLQEMGRNIVF 501

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM-NKVNREIHMNSYAFSKMPKL 487
           +ES N PGKR+RLW  KDI  VL KN GT+ I+GI L++    + E   ++ AFSK  +L
Sbjct: 502 QESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVLNLVQPCDYEGRWSTEAFSKTSQL 561

Query: 488 RFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT--LNICAEKLVSLKMPCTKVEQL 545
           + L     +   +   L  +P + ++ L W  CPLKT  LN   +++V LK+P +++EQL
Sbjct: 562 KLLMLCDMQ---LPRGLNCLP-SSLKVLHWRGCPLKTLPLNNKLDEVVDLKLPHSRIEQL 617

Query: 546 W-----------------------------DDVQRLPSSLCTFKTPITFEII-------- 568
           W                              +++ L    CT  T +   ++        
Sbjct: 618 WRGTKLLEKLKSINLSFSKNLKQSPDFGGAPNLESLVLEGCTSLTEVHPSLVRHKKLAMM 677

Query: 569 ---DCKMLERLP--------------------------DELENLEYLTVKGTTIRELPES 599
              DCK L+ LP                          + +E+L  L+++GT I +LP S
Sbjct: 678 NLKDCKRLKTLPSKMEMSSLKDLNLSGCSEFKYLPEFGESMEHLSVLSLEGTAIAKLPSS 737

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
           LG L  +  L L N  NL  +P++  +L+ L  L +S C +L  LPE     GL   +  
Sbjct: 738 LGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGCSKLGCLPE-----GL---KEI 789

Query: 660 TSLEKLPAGLSSM----SSVLYV 678
            SLE+L A  +++    SSV Y+
Sbjct: 790 KSLEELDASGTAIQELPSSVFYL 812



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 18/201 (8%)

Query: 560  KTPITFEIIDCKMLERLPDELE-NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLE 618
            +TP  F +   K+   LP  +  NL Y  +   +    P+    LS ++ L L+ N N  
Sbjct: 846  QTPTAFRLPPSKL--NLPSLMRINLSYCNLSEES---FPDGFRHLSSLQFLDLTGN-NFV 899

Query: 619  RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
             +P  I +L+KL  L ++ C++L+ LPELP  +  L A NCTSLE      S   S+   
Sbjct: 900  TLPSCISNLTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTSLETSKFNPSKPCSLFAS 959

Query: 679  NLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKT 738
            +  NF      EL   +++  +  + +E       M  PG+EIP WF  Q   S A +  
Sbjct: 960  SPSNFHF--SRELIRYLEELPLPRTRFE-------MLIPGSEIPSWFVPQKCVSLAKIPV 1010

Query: 739  RPPRPAGYNKLISFAFCAVVV 759
              P     N+ + FA C ++V
Sbjct: 1011 --PHNCPVNEWVGFALCFLLV 1029


>gi|147853075|emb|CAN83385.1| hypothetical protein VITISV_004581 [Vitis vinifera]
          Length = 1024

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 302/943 (32%), Positives = 463/943 (49%), Gaps = 158/943 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFT+HL   L  K I TF D D+L +G  IS +L+  IE S  +II
Sbjct: 12  YDVFLSFRGDDTRNNFTAHLLQELRTKGINTFFDEDKLEKGRVISPALITAIENSMFSII 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY VDPS VR     FG   ++  +  
Sbjct: 72  VLSENYASSRWCLEEMVKILECNRSKEERVLPIFYNVDPSDVRNHMGKFGEALAKHEENL 131

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK-GLVG 155
            E   ++K W++ALTE A+LSG+DS   + E  LI+EI   +LK+L  T+ S  +  LVG
Sbjct: 132 EENGERVKIWRDALTEVANLSGWDSRN-KNEPLLIKEIVIKLLKKLLNTWTSDTEENLVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  I+++  LLC+ S+ V  + I G+GGI K T+A A+++++S  FE   F L +    
Sbjct: 191 IQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSF-LEIANDF 249

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS------------ 261
           +   +  L +KLLS+L ++ N++     S   RL  +KV +V D+V +            
Sbjct: 250 KEQDLTSLAEKLLSQLLQEENLKIKGSTSIKARLHSRKVLVVLDNVNNLTILEHLAGNQD 309

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+I+TTRD+++L     +  Y + E    +A +     +   + L+    EL+ 
Sbjct: 310 WFGQGSRIIVTTRDQRLLIQHKVDY-YEVAEFNGDEAFEFLKHHSLKYELLENDLQELSR 368

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + I YA+G+PLAL+VLG  L G +K+ W   + KL+  P++EI+EVL++SYD LDD +KN
Sbjct: 369 EIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEVLRLSYDRLDDEEKN 428

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACF +GE +D V+ I                +KSLI ++   ++ MHDL+++MG+
Sbjct: 429 IFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLIQEMGK 488

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
            IVR+E    P +R+RLW H+DI+ VLK+N G+E IEGI L+++ +   +     AF+ M
Sbjct: 489 GIVRQECPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGIFLNLSHLEDTLDFTIEAFAGM 548

Query: 485 PKLRFLRFYGDKN-------------KCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NI 527
            KLR L+ Y  K+              C V       F   ++R+L W    LK+L  + 
Sbjct: 549 KKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFCSNDLRYLYWHGYSLKSLPKDF 608

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENLEYL 586
             + LV L MP + +++LW  +                     K+LERL   +L + +YL
Sbjct: 609 SPKHLVELSMPYSHIKKLWKGI---------------------KVLERLKSIDLSHSKYL 647

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
                   + P+  G ++ ++RL+L    NL ++  S+  L KL FL + +C  L+ LP 
Sbjct: 648 I-------QTPDFSG-ITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPS 699

Query: 647 LPCNLGLLSA---RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
             C+L  L       C+  E+ P    ++                  L E+  DG +  +
Sbjct: 700 STCSLKSLETFILSGCSKFEEFPENFGNLEM----------------LKELHADGIVDST 743

Query: 704 LYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
                     +  PG+ IP W R+QS  S   ++   P     N L    F   +VF   
Sbjct: 744 F--------GVVIPGSRIPDWIRYQS--SRNVIEADLPLNWSTNCL---GFALALVFGG- 789

Query: 764 LKYFRHKSGEDDWD-GNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEY 822
               R     DDW    V+      +R  E  + S+ +    + E DHV L         
Sbjct: 790 ----RFPVAYDDWFWARVFLDFGTCRRSFETGI-SFPMENSVFAEGDHVVLT-------- 836

Query: 823 FGPNYDEFS----FRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
           F P     S      I  +F         E+K+CG+  +Y  +
Sbjct: 837 FAPVQPSLSPHQVIHIKATFAIMSVPNYYEIKRCGLGLMYVNE 879


>gi|451798984|gb|AGF69190.1| TMV resistance protein N-like protein 4 [Vitis labrusca]
          Length = 1049

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 322/996 (32%), Positives = 484/996 (48%), Gaps = 174/996 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S   II
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           +FS+ YA SRW                      FY VDPS VR Q  SFG     H    
Sbjct: 80  VFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGEALAYHERDA 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   E +++W+ ALT+AA LSG   +  + E+++++EI N +++RL+    S  K +VG
Sbjct: 140 NQEKKEMVQKWRIALTKAAYLSGCHVDD-QYETEVVKEIVNTIIRRLNRQPLSVGKNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++SL+      V  + I G GG+ K TIA A++N+IS  ++GS F  N+RE  
Sbjct: 199 ISVHLEKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRERS 258

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDV---------- 259
           + G I  LQ++LL  +   K   +  ++  ++ + R     +V I+FDDV          
Sbjct: 259 K-GDILQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRVLIIFDDVDELKQLEYLA 317

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDK VL     +  Y + +L   +A +LF  WAF  +H    + 
Sbjct: 318 EEKDWFQAKSTIIITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKEVYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKVLG  L G+    WESAM KL+IIPH+EI  VL+IS+D LDD
Sbjct: 378 NLSYNIIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLLRDMG 423
             K +FLD+ACF +G+ +  V  I            A + LI +    R+ MHDL++ MG
Sbjct: 438 VDKGIFLDVACFFKGDDKYFVSRILGPHAKHGITTLADRCLITVSK-NRLDMHDLIQQMG 496

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            EI+R+E    PG+R+RLW   + Y VL +N GT+AIEG+ LD  K N    +   +F +
Sbjct: 497 WEIIRQECPKDPGRRSRLW-DSNAYHVLIRNMGTQAIEGLFLDRCKFNPS-QLTMESFKE 554

Query: 484 MPKLRFLRFYGDKNKCMV-SHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           M KLR L+ +  + K  + +HL     F+  E+R+L W   PL++L  N  A+ LV L +
Sbjct: 555 MNKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVELSL 614

Query: 538 PCTKVEQLWD----------------------------------------DVQRLPSSLC 557
             + ++Q+W                                         +++ LP  + 
Sbjct: 615 RDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEGCVNLELLPRGIY 674

Query: 558 TFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNN 614
             K   T     C  LER P+ + N   L  L + GT I +LP S+  L+ ++ L+L   
Sbjct: 675 KLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC 734

Query: 615 SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLPELPCNL 651
           S L +IP                        +I  LS+L  L +SHC  L+ +PELP  L
Sbjct: 735 SKLHQIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELPSGL 794

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERG 709
             L   +CTSLE     LSS S++L+ +L  C   K+   +    V+      +   ER 
Sbjct: 795 INLDVHHCTSLE----NLSSPSNLLWSSLFKCFKSKIQARDFRRPVR------TFIAER- 843

Query: 710 IKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRH 769
                    N IP+W  HQ  G   T+K  P      +  + F  C++ V P  ++   H
Sbjct: 844 ---------NGIPEWICHQKSGFKITMKL-PWSWYENDDFLGFVLCSLYV-PLEIETTPH 892

Query: 770 K--SGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGP-N 826
           +  + + ++D +     C        H +  F       + D    GC  +  +   P  
Sbjct: 893 RDFNCKLNFDDDSAYFSC------HSHQFCEFC-----YDEDASSQGCLIYYPKSNIPEG 941

Query: 827 YDEFSFR-IHCSFHFPPYLERGEVKKCGIHFVYAQD 861
           Y    +R ++ SF+    ++  +V +CG HF+YA D
Sbjct: 942 YHSNEWRTLNASFNVYFGVKPVKVARCGFHFLYAHD 977


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 299/806 (37%), Positives = 416/806 (51%), Gaps = 140/806 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL   L  K I TF DD+ L RG  IS+ L+  I+ S  AI 
Sbjct: 20  YHVFLSFRGEDTRKGFTDHLCAALERKGITTFKDDKDLERGQVISEKLINAIKDSMFAIT 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S  YASS W                      FY VDPS VR Q   F   F + +++F
Sbjct: 80  ILSPDYASSTWCLDELQMIMECSSKNNLHVLPVFYGVDPSDVRHQRGCFEEAFRKHQEKF 139

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               +++ RW++A T+ A  SG+DS   + E+ L+E IA  + ++L     S  + LVG+
Sbjct: 140 GQHSDRVDRWRDAFTQVASYSGWDSKG-QHEASLVENIAQHIHRKLVPKLPSCTENLVGI 198

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              +EE+   L +G   V  + IWG+GGI K TIA AV+  I   FE + F  NVRE  E
Sbjct: 199 VSKVEEVNKFLGMGLNDVRFIGIWGMGGIGKSTIARAVYETIRCEFELTCFLENVREISE 258

Query: 217 TGGIKDLQKKLLSELSKDGN-----MRNIESQLNRLARKKVRIVFDDVTS---------- 261
           T G+  LQ++LLS LS   N         ++  N L RKKV +V DDV            
Sbjct: 259 TNGLVHLQRQLLSHLSISRNDFHDLYDGKKTIQNSLCRKKVLLVLDDVNELNQLENLVGK 318

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSRVIITTRDK +L     +K Y+   L   DA  LFC  AF GD     +++L
Sbjct: 319 QDWFGPGSRVIITTRDKHLLMTHGVHKTYKTGMLCKHDALVLFCLKAFKGDKPQEGYLDL 378

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + + + Y  G+PLAL+VLG YL GR+ +VW SA++KL   PH  +++ LKISYDSLD  +
Sbjct: 379 SKEVVDYCGGLPLALEVLGSYLYGRNIDVWHSAVKKLRSFPHPRVQDNLKISYDSLDTME 438

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLD-LFYRIRMHDLLRD 421
           K++FLDIACF +G   D+VI I ++              +SLI LD +  ++ MHDLL++
Sbjct: 439 KDIFLDIACFFKGMKGDKVIDILESCGYFPQIGIQILIERSLITLDSVNNKLGMHDLLQE 498

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IV +ES N P +R+RLW  +DI +VL KN GTEAI  I + + +   E H N+ AF
Sbjct: 499 MGRDIVFQESPNDPCRRSRLWSQEDIDRVLTKNKGTEAINSIDMKLLQ-PYEAHWNTEAF 557

Query: 482 SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKMPC 539
           SK  +L+FL     +    +S L     + ++ L W  CPLKTL I  +  +LV + +  
Sbjct: 558 SKTSQLKFLSLCEMQLPLGLSCLP----SSLKVLHWRGCPLKTLPITTQLDELVDITLSH 613

Query: 540 TKVEQLWDDV-----------------QRLPS-----------------------SLCTF 559
           +K+EQLW  V                 +RLP                        SL   
Sbjct: 614 SKIEQLWQGVKFMEKMKYLNLAFSKNLKRLPDFSGVPNLEKLILEGCEGLIEVHPSLAHH 673

Query: 560 KTPITFEIIDCKMLERLP--------------------------DELENLEYLTVKGTTI 593
           K  +   + DCK L+ L                           +++ENL  L ++GT I
Sbjct: 674 KKVVLVNLKDCKSLKSLSGKLEMSSLKKLILSGSSKFKFLPEFGEKMENLSMLALEGTDI 733

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP----ELPC 649
           R+LP SLGRL  +  L L +  +L  +P++I  L+ L  L IS C +L  LP    E+ C
Sbjct: 734 RKLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITLDISGCSKLCRLPDGLKEIKC 793

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSV 675
            L  L A N T++++LP+ +  + S+
Sbjct: 794 -LEELHA-NDTAIDELPSSIFYLDSL 817



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 30/196 (15%)

Query: 575  RLPDE---LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
            RLP     L +LEYL +    + E   P     LS +K L L+ N N   IP SI  LS+
Sbjct: 853  RLPSSVMGLPSLEYLNLSYCNLSEESFPNYFHHLSSLKSLDLTGN-NFVIIPSSISKLSR 911

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL---PAGLSSMSSVLYVNLCNFLKL 686
            L FL ++ C++LQ LPELP  +  L+A NC SL+ +   PA L S+ +            
Sbjct: 912  LRFLCLNWCQKLQLLPELPLTMTQLNASNCDSLDTMKFNPAKLCSLFA------------ 959

Query: 687  DPNELSEIVKDGWMKHSLYEERGIKKS---MYFPGNEIPKWFRHQSMGSSATLKTRPPRP 743
             P +LS + +     +  +E+R +  +   M  PG+EIP WF  Q   S A  K   P  
Sbjct: 960  SPRKLSYVQE----LYKRFEDRCLPTTRFDMLIPGDEIPSWFVPQRSVSWA--KVHIPNN 1013

Query: 744  AGYNKLISFAFCAVVV 759
               ++ + FA C ++V
Sbjct: 1014 FPQDEWVGFALCFLLV 1029


>gi|356528847|ref|XP_003533009.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1137

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 280/746 (37%), Positives = 410/746 (54%), Gaps = 102/746 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR +FTSHLH  L   SI+T+ID ++ +G+ +   L+  I+ S + ++I
Sbjct: 25  YDVFISFRGEDTRGDFTSHLHAALGRSSIETYIDYRIQKGEEVWVELVKAIKGSTLFLVI 84

Query: 62  FSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           FSE YA+S W                       FY++DPS VRKQ+ S+         R 
Sbjct: 85  FSENYANSSWCLNELVELMECRKQEEEVHVIPVFYKIDPSQVRKQTGSY---------RA 135

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
               ++WK+AL EAA+LSGF S+  R E+ LIE+I   VL++L+  +    +GL   + +
Sbjct: 136 AVANQKWKDALYEAANLSGFHSHTYRTETDLIEDIIKVVLQKLNHKYTYDFRGLFISDEN 195

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
              IESLL I S  V  + IWG GGI K T+A A+F+K+S  +EG+ F  NV E  +  G
Sbjct: 196 YTSIESLLKIDSMEVRVIGIWGKGGIGKTTLAAAIFHKVSFQYEGTCFLENVAEESKRHG 255

Query: 220 IKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
           +     KL S+L +     D N     +   RL RKKV IV DDV +             
Sbjct: 256 LNYACNKLFSKLLREDINIDTNKVIPSNVPKRLRRKKVFIVLDDVNTPQLLENLVGAGAE 315

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVI+TTRD+ VLK+    K + +KE+ + ++ KLF   AFG  +    + EL+ 
Sbjct: 316 WLGAGSRVIVTTRDRHVLKSRGVEKIHEVKEMNFHNSLKLFSLNAFGKTYPTEEYEELSK 375

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + YA+G+PLALKVLG +L  +S+  W+SA+ KL+ IP+ EI+ VL++SYD LDD  KN
Sbjct: 376 RVMVYAKGIPLALKVLGSFLRSKSENEWDSALTKLKKIPNQEIQTVLRLSYDGLDDGDKN 435

Query: 378 VFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR------------IRMHD 417
           +FLDIACF +G+  D V  + +A         K+L++  L               I MHD
Sbjct: 436 IFLDIACFFKGQKGDSVTKVLNACGFSADIGIKNLLDKALITTTTDMHDSTTDSCIDMHD 495

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L+++MGR IVR+ESI++PG+R+RLW  +++  VL  NTGT AI+GI L+M+++ ++I ++
Sbjct: 496 LIQEMGRGIVREESIDNPGQRSRLWDPEEVNDVLTNNTGTGAIQGIWLEMSQI-QDIKLS 554

Query: 478 SYAFSKMPKLRFLRFY---GDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICA 529
           S +F KMP LR L F    G+  +    +L +G+ F   ++R+L W  CPL++L    C 
Sbjct: 555 SKSFRKMPNLRLLAFQSLNGNFKRINSVYLPKGLEFLPKKLRYLGWNGCPLESLPSTFCP 614

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEY 585
           EKLV L M  + V++LW  VQ LP +L          +++C  L   P      + + E 
Sbjct: 615 EKLVELSMRYSNVQKLWHGVQNLP-NLEKIDLFGCINLMECPNLSLAPKLKQVSISHCES 673

Query: 586 LTVKGTTIRELP-------------ESLGRLSWVKRL--ILSNNSNLERIPESIRHLSKL 630
           L+    +I  LP             +SLG  +W + L  +    S L  +P S+ H+  L
Sbjct: 674 LSYVDPSILSLPKLEILNVSGCTSLKSLGSNTWSQSLQHLYLEGSGLNELPPSVLHIKDL 733

Query: 631 TFLFISHCERLQTLPELPCNLGLLSA 656
                S    L  LPE   N  +LSA
Sbjct: 734 KIFASSINYGLMDLPENFSNDIVLSA 759



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 22/156 (14%)

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
           N+  +PES+++L +L  L +  C+ L+ +P LP ++      NC SL+ + +  S++  +
Sbjct: 816 NIISLPESLKYLPRLHRLCVGECKMLRRIPALPQSIQCFLVWNCQSLQTVLS--STIEPL 873

Query: 676 LYVN----LCNFLKLDPNEL---------SEIVKDGWMKHSLYEERGIKKSMYFPGNEIP 722
              N    L N +KLD +           SE+++D +  + +Y+   +  S+     ++ 
Sbjct: 874 ESPNGTFLLANCIKLDEHSFDAIIGEPPPSEVLEDAFTDNYIYQTAKLCYSLPARSGKVR 933

Query: 723 KWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           +WF      S  T++  P        L+ F F  VV
Sbjct: 934 EWFHCHFTQSLVTVEIPP-------NLLGFIFYLVV 962


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1158

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 295/791 (37%), Positives = 429/791 (54%), Gaps = 110/791 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R  F SHL   L  K +  F+DD+L  GD IS SL   IE S I+++I
Sbjct: 14  YDVFISFRGTDVRCGFLSHLKKELRQKQVDAFVDDRLEGGDEISHSLDKAIEGSLISLVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRKR 98
           FS+ YASS+W                      FY VDPS VR Q  ++G  F++    KR
Sbjct: 74  FSKDYASSKWCLEEVVKIIECMHSNKQIVIPVFYNVDPSDVRHQKGTYGDAFAKHEKNKR 133

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              K+  W+ AL  AA+LSGF S+    E +LIEEIA  +  +L+  +QS+   LVG+E 
Sbjct: 134 NLAKVPNWRCALNIAANLSGFHSSKFVDEVELIEEIAKCLSSKLNLMYQSELTELVGIEE 193

Query: 159 SIEEIESLLCIGSE--GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
            I ++ESLLC+GS   GV  + IWG+GGI K TIA AV+N++   +EG  F  N+ E  E
Sbjct: 194 RIADLESLLCLGSTIVGVRVIGIWGMGGIGKTTIAAAVYNRLYFEYEGCCFMANITEESE 253

Query: 217 TGGIKDLQKKLLSELSKDGNMR-----NIESQLNR-LARKKVRIVFDDVT---------- 260
             G+  ++ K++S L K+ +++      +   + R L RKKV +V DD+           
Sbjct: 254 KHGMIYVKNKIISILLKENDLQIGTPNGVPPYVKRRLIRKKVLVVLDDINDSEQLENLVG 313

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSR+I+TTRDK VL    A+  Y  K L   +A KLF   AF    L+   IE
Sbjct: 314 ALDWFGSGSRIIVTTRDKGVLGK-KADIVYEAKALNSDEAIKLFMLNAFKQSCLEMEWIE 372

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ + I+YA G PLALKVLG +L G+S+  WES ++KL+ +P V+I+ VL+++YD LD  
Sbjct: 373 LSRRVIQYANGNPLALKVLGSFLYGKSQIEWESQLQKLKKMPQVKIQNVLRLTYDRLDRE 432

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFYR--------------IRMHDL 418
           +KN+FL IACF +G     +I + DA    ++I L +                 + MHDL
Sbjct: 433 EKNIFLYIACFFKGYEVRRIIYLLDACGFSTIIGLRVLKDKALIIEAKGSGISIVSMHDL 492

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +++MG EIVR+E I  PGKR RLW   DI+ VLK NTGT+AI+ I+ +++K + E+ ++ 
Sbjct: 493 IQEMGWEIVREECIEDPGKRTRLWDPNDIHLVLKNNTGTKAIKSITFNVSKFD-EVCLSP 551

Query: 479 YAFSKMPKLRFLRF---YGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKT--LNICAEKL 532
             F +M +L+FL F   YGD+    +   LE +P  ++R   W   PLK+  L+ CAE L
Sbjct: 552 QIFERMQQLKFLNFTQHYGDEQILYLPKGLESLP-NDLRLFHWVSYPLKSLPLSFCAENL 610

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLT 587
           V LK+P ++VE+LWD +Q L       K  +++     K L  LPD      LE +E  +
Sbjct: 611 VELKLPWSRVEKLWDGIQNLEH---LKKIDLSYS----KNLLELPDFSKASNLEEVELYS 663

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ----- 642
            K   +R +  S+  L  + RL L     L  +  S  HL  L  LF+  C RL+     
Sbjct: 664 CKN--LRNVHPSILSLKKLVRLNLFYCKALTSL-RSDSHLRSLRDLFLGGCSRLKEFSVT 720

Query: 643 ------------TLPELPCNLG------LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
                        + ELP ++G       L+  +C SL  LP  ++++ S+  +++    
Sbjct: 721 SENMKDLILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVANLRSLRRLHIYGCT 780

Query: 685 KLDPNELSEIV 695
           +LD + L  +V
Sbjct: 781 QLDASNLHILV 791



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 178/403 (44%), Gaps = 72/403 (17%)

Query: 460  IEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQ 519
            +E + L   K  R +H +  +  K+ +L    FY    K + S         +R L    
Sbjct: 656  LEEVELYSCKNLRNVHPSILSLKKLVRLNL--FYC---KALTSLRSDSHLRSLRDLFLGG 710

Query: 520  CP-LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
            C  LK  ++ +E +  L +  T + +L       PSS+ + +   T  +  CK L  LP+
Sbjct: 711  CSRLKEFSVTSENMKDLILTSTAINEL-------PSSIGSLRKLETLTLDHCKSLSNLPN 763

Query: 579  ELENLEYL---------------------------TVKGTTIR---ELPESLGRLSWVKR 608
            ++ NL  L                           T+K    R   E+P+++  LS   R
Sbjct: 764  KVANLRSLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEECRNLFEIPDNINLLS-SLR 822

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
             +L   +++E +  SI+HLSKL  L +S C RL +LPELP ++  L A NC+SLE +   
Sbjct: 823  ELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAINCSSLETVMFT 882

Query: 669  LSSMSSV----LYVNLCNFLKLDPNELSEIVKDGW--MKHSLYEE-----------RGIK 711
            LS++  +    L+    N +KLD + LS I  + +  +K   Y++            G  
Sbjct: 883  LSAVEMLHAYKLHTTFQNCVKLDQHSLSAIGVNAYVNIKKVAYDQFSTIGTNSIKFLGGP 942

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKS 771
                +PG+E+P+WF +++  +S T+      P   +K++ F FC +V         +  S
Sbjct: 943  VDFIYPGSEVPEWFVYRTTQASVTVDLSSSVPC--SKIMGFIFCVIVD--------QFTS 992

Query: 772  GEDDWDG-NVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFL 813
             + ++ G + Y      +R + GH+ +W         SDHV L
Sbjct: 993  NDKNYIGCDCYMETGVGERVTRGHMDNWSSIHACEFFSDHVCL 1035


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 312/979 (31%), Positives = 472/979 (48%), Gaps = 189/979 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R  F SHL      K I  F+DD+L RGD ISQSLL  IE S I++II
Sbjct: 10  YDVFVSFRGSDIRLGFLSHLSKAFHQKQIHAFVDDKLQRGDEISQSLLEAIEGSSISLII 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASSRW                      FY VDP++VR Q  SF    +   K++ 
Sbjct: 70  FSEDYASSRWCLEELVKIVECREEYGQIVIPVFYNVDPTNVRHQKGSFETALAEHEKKYD 129

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             + R W+ AL  +A+L+G +S   R +++L+E+I + VLKRL+    + +KGL+G++  
Sbjct: 130 LPIVRMWRRALKNSANLAGINSTNFRNDAELLEDIIDHVLKRLNKKPINNSKGLIGIDKP 189

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I ++ESLL   S+ V  + IWG+ GI K TI   +FNK    +E   F   V E  E  G
Sbjct: 190 IADLESLLRQESKDVRVIGIWGMHGIGKTTIVEELFNKQCFEYESCCFLAKVNEELERHG 249

Query: 220 IKDLQKKLLSELSKDGNMRNIESQ-----LNRLARKKVRIVFDDVT-------------- 260
           +  +++KL+S L  +    N  +      L R+ R K+ IV DDV               
Sbjct: 250 VICVKEKLISTLLTEDVKINTTNGLPNDILRRIGRMKIFIVLDDVNDYDQVEKLVGTLDW 309

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA---SHIEL 315
             SGSR+IIT RD+Q+L N   +  Y +  L   +A +LFC  AF   HL      ++ L
Sbjct: 310 LGSGSRIIITARDRQILHN-KVDDIYEIGSLSIDEAGELFCLNAFNQSHLGKEYWDYLLL 368

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +   + YA+GVPL LKVLG  L G+ KEVW+S + KL+ +P+ ++ +++K SY  LD  +
Sbjct: 369 SYWMVDYAKGVPLVLKVLGQLLRGKDKEVWKSQLDKLQKMPNKKVHDIMKPSYYDLDRKE 428

Query: 376 KNVFLDIACFLEG--------------EHRDEVISIF---DASKSLINLDLFYRIRMHDL 418
           KN+FLDIACF  G                 D  ++I       KSLI +     + MH++
Sbjct: 429 KNIFLDIACFFNGLNLKVDYLNLLLRDHENDNSVAIGLERLKDKSLITISEDNTVSMHNI 488

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +++MGREI  +ES    G R+RL    +IY+VL  N GT AI  IS+D++K+ R++ +  
Sbjct: 489 VQEMGREIAHEESSEDLGSRSRLSDADEIYEVLNNNKGTSAIRSISIDLSKI-RKLKLGP 547

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICAEKLV 533
             FSKM  L+FL F+G  N+  +  L EG+ +  + +R+L W QCPL++L     A+ LV
Sbjct: 548 RIFSKMSNLQFLDFHGKYNRDDMDFLPEGLEYLPSNIRYLRWKQCPLRSLPEKFSAKDLV 607

Query: 534 SLKMPCTKVEQLWDDVQRLP---------------------------------------S 554
            L +  + V++LWD +Q L                                        S
Sbjct: 608 ILDLSDSCVQKLWDGMQNLVNLKEVRLYRCQFMEELPDFTKATNLEVLNLSHCGLSSVHS 667

Query: 555 SLCTFKTPITFEIIDCKMLERLPDE---LENLEY-----------LTVKGTTIREL---- 596
           S+ + K     EI  C  L RL  +   L +L Y           L+V    + EL    
Sbjct: 668 SIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLELCHGLKELSVTSENMIELNMRG 727

Query: 597 -------PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
                  P S GR S ++ L++   S ++ +P SI+  ++L  L + HC+ LQT+PELP 
Sbjct: 728 SFGLKVLPSSFGRQSKLEILVIY-FSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIPELPP 786

Query: 650 NLGLLSARNC----------TSLEKLPAG----------------LSSMSSVLYVNLCNF 683
           +L  L A  C          T++E+L                   L+++   + +N+  F
Sbjct: 787 SLETLLANECRYLRTVLFPSTAVEQLKENRKKIEFWNCLCLDKHSLTAIELNVQINVMKF 846

Query: 684 L-------KLDPNELSEIVKDGWMKHSL---YEERGIKKSMY-FPGNEIPKWFRHQSMGS 732
                   +LD ++ ++ V    + H L   YEE    ++ Y +PG+  PKW  +++   
Sbjct: 847 ACQHFPAPELDFDDYNDYV----VIHDLQSGYEECDSYQATYAYPGSTFPKWLEYKTTND 902

Query: 733 SATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE 792
              +     + +     + F FC +V           K  + D    +Y    D + + E
Sbjct: 903 YVVIDLSSGQLSHQ---LGFIFCFIV----------PKDSKRDDKLILYITISDCEGEGE 949

Query: 793 GHLYSWFLGKISYVESDHV 811
                 ++ K    +SDHV
Sbjct: 950 KGSTKMYMNKSDSTKSDHV 968


>gi|357468519|ref|XP_003604544.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505599|gb|AES86741.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1087

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 303/968 (31%), Positives = 467/968 (48%), Gaps = 176/968 (18%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            YDVF+SFRG+D R +F SHL   L  K IK F+DD+L RGD I QSL+  IE S I++II
Sbjct: 62   YDVFVSFRGKDIRGDFLSHLIEALRRKKIKAFVDDELKRGDEILQSLVRGIEGSLISLII 121

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FS+ YASSRW                      FY +DP+ VR Q  S+   F   ++ + 
Sbjct: 122  FSQDYASSRWCLEELVTILQCREKYGQIVVPIFYGIDPADVRYQMKSYENAFVEHQRVYS 181

Query: 101  E-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
              K++ W++AL ++A+LSG  S+  R + +L++EI   V   L+      +KGL+G+   
Sbjct: 182  STKVQIWRHALNKSANLSGIKSSDFRNDVQLLKEIIKCVSMNLNNKHLISSKGLIGIGKQ 241

Query: 160  IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
            I  + SLL + S+ V  + IWG+GGI K T+A  VF+++   +EG  F  N+RE     G
Sbjct: 242  IAHLISLLSLDSQDVRIVGIWGMGGIGKTTLAEEVFHQLQTEYEGCCFLENIREESAKHG 301

Query: 220  IKDLQKKLLSELSKDGNMRNIESQL-----NRLARKKVRIVFDDVTS------------- 261
            +  L++KL S L  +    +  ++L      R++R K  IV DDV               
Sbjct: 302  MLFLKEKLFSALLDEDVKVDTANRLPHYVKTRISRMKALIVLDDVNDFDQMEILAGDHDL 361

Query: 262  ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
               GSRVIITTRDKQ+L     +  Y +  L +  + +LF   AF    L+  + ELT +
Sbjct: 362  FGFGSRVIITTRDKQMLSQD-VDDIYEVGALDFDKSLELFNLNAFKVKELEIEYYELTKR 420

Query: 319  AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             + YA+G+PL LKVL   L G+ K VWES + KL+ +P  ++++V ++SYD LD  +K +
Sbjct: 421  VVNYAKGIPLVLKVLAHLLRGKDKLVWESQLDKLKKMPSKKVQDVTRLSYDDLDRKEKKI 480

Query: 379  FLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDLLRD 421
            F D+ACF  G               E  + V S  +    K LI+      I MHD++++
Sbjct: 481  FSDLACFFNGSNLKVDYIKFLLKDSESDNSVASGLERLKDKGLISFSKDNVISMHDIIQE 540

Query: 422  MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
            MGREIVR+ES   PG  +RLW   D+Y+VLK +TGTEAI  I + +  + R++ ++   F
Sbjct: 541  MGREIVRQESNGDPGSCSRLW-DDDVYEVLKNDTGTEAIRSIWMQLPTL-RKLKLSPSTF 598

Query: 482  SKMPKLRFLRFYG----DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
            + M  L+FL        D    +   L  +P  E+R+L W   PLK+L     AEKLV L
Sbjct: 599  ANMRNLQFLYVPSTCDQDGFDLLPQGLHSLP-PELRYLSWMHYPLKSLPDEFSAEKLVIL 657

Query: 536  KMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID------------- 569
             +  ++VE+LW  VQ L +              L  F   +  E++D             
Sbjct: 658  DLSYSRVEKLWHGVQNLLNLKEVKLFFSRYLKELPDFSKALNLEVLDIHFCSQLTSVHPS 717

Query: 570  --------------CKMLERLPDELE-----------------------NLEYLTVKGTT 592
                          C  L  L  +                         N+  L ++ T 
Sbjct: 718  ILSLEKLEKLDLSHCTSLTELTSDTHTSSLRYLNLKFCKNIRKFSVTSVNMTELDLRYTQ 777

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
            +  LP S G  S ++ L L N S +E  P   ++L KL +L + +C++LQ LP LP +L 
Sbjct: 778  VNTLPASFGCQSKLEILHLGNCS-IENFPSCFKNLIKLQYLEVRYCQKLQNLPVLPPSLE 836

Query: 653  LLSARNCTSLEKL--PAGLSSM-SSVLYVNLCNFLKLDPNELSEIVKDGWM--------- 700
            +L A+ CT+L+ +  P+       +   V   N LKLD + L+ IV +  +         
Sbjct: 837  ILLAQECTALKTVLFPSIAEQFKENRKRVVFANCLKLDEHSLANIVFNAQINITKFAYQH 896

Query: 701  ----------KHSLYEERGIKKSMY-FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                      K + Y E    +++Y +PG+ +P WF +++      +    P    +++ 
Sbjct: 897  VSASRDEFHNKFNNYNEDDSHQALYVYPGSCVPDWFEYKTTTDYVAIDL--PSSTSHSRF 954

Query: 750  ISFAFCAVV----VFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISY 805
            + + FC V+    +    LK+            N+  +C + + K E +   +     S 
Sbjct: 955  LGYIFCFVLGGNRLIVDMLKF------------NI-TLCVEGQGKEEDYFELYISRPSSI 1001

Query: 806  VESDHVFL 813
            + SDHVF+
Sbjct: 1002 IVSDHVFM 1009


>gi|93117597|gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 263/746 (35%), Positives = 403/746 (54%), Gaps = 112/746 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R  FT HL+       I TF D +++ RG+ IS+ L   I+ S I+++
Sbjct: 52  YDVFLSFRGEDNRKTFTDHLYTAFVQAGIHTFRDQNEIPRGEEISKHLHKAIQESKISVV 111

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF + F R  + 
Sbjct: 112 VFSKGYASSRWCLNELVEILESKNRKTDQIVLPIFYDIDPSEVRKQTGSFAKAFHRHEEA 171

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
           F EK+K W+ AL EA +LSG++ N +    ESKLI+EI  DVL +LD    +    LVG+
Sbjct: 172 FTEKVKEWRKALEEAGNLSGWNLNDMENGHESKLIQEIVKDVLNKLDPKHINVATHLVGI 231

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AE 215
           +  +  I   L   ++ VC + I G+ GI K +IA  VFN+    FEGS F  N+ E +E
Sbjct: 232 DPLVLAISDFLSTATDEVCIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSE 291

Query: 216 ETGGIKDLQKKLLSELSKDG--NMRNIESQL----NRLARKKVRIVFDDVT--------- 260
           ++ G+  LQ++LL ++ K    N+ N+   +     R+  K+V +V DDV          
Sbjct: 292 QSNGLVLLQEQLLHDILKQNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNALM 351

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSRVIITT+D+ +L     ++ YR++EL   ++ +LF   AFG       ++
Sbjct: 352 GERSWFGPGSRVIITTKDEHLLLK--VDRTYRVEELKRDESLQLFSWHAFGDTKPAKDYV 409

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL++  + Y  G+PLAL+VLG  L G+++  W+  + KL  IP+ EI++ L+IS+DSLDD
Sbjct: 410 ELSNDVVDYCGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKLRISFDSLDD 469

Query: 374 SQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
            Q +N FLDIACF  G +++ V  + +A               +SLI +D F +I MHDL
Sbjct: 470 HQLQNTFLDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDL 529

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           LRDMGR+I+ KES  HPGKR+R+W  +D + VL K+ GTE +EG++LD  + + +  +++
Sbjct: 530 LRDMGRDIIHKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDA-RASEDKSLST 588

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA----EVRHLEWPQCPLKTL--NICAEKL 532
            +F+KM  L+ L+  G        HL G PF     E+  + W +CPLK+   ++  + L
Sbjct: 589 GSFTKMRFLKLLQING-------VHLTG-PFKLLSEELIWICWLECPLKSFPSDLMLDNL 640

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
           V L M  + +++LW + +++ + L       +  +I    L                   
Sbjct: 641 VVLDMQYSNIKELWKE-KKILNKLKILNFSHSKHLIKTPNLHS----------------- 682

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
                      S +++L+L   S+L  + +SI HL  L  L +  C R++ LPE  C++ 
Sbjct: 683 -----------SSLEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGCWRIKILPESICDVK 731

Query: 653 LLSARN---CTSLEKLPAGLSSMSSV 675
            L + N   C+ LEKLP  +  + S+
Sbjct: 732 SLESLNISGCSQLEKLPERMGDIESL 757


>gi|357449525|ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
 gi|355484087|gb|AES65290.1| TMV resistance protein N [Medicago truncatula]
          Length = 1128

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 281/780 (36%), Positives = 414/780 (53%), Gaps = 93/780 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG+DTR  FTSHL+  L    +KTFIDD +L +GD IS +L+  IE SC +I+
Sbjct: 22  FDVFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEISSALIKAIEESCASIV 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I SE YASS+W                      FY +DPSHVR Q  S+G+ F++  K  
Sbjct: 82  ILSENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQIGSYGQAFAKYEKNL 141

Query: 100 PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD--ATFQSKNKGLV 154
             K   +++WK+ALTE + LSG+DS   R ES  I++I  DVL++L+    F++ NK LV
Sbjct: 142 RHKKDNLQKWKDALTEVSKLSGWDSKNSRIESDFIKDIVKDVLEKLNHGRPFEA-NKELV 200

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+E   EEIE L   GS  V  L +WG+GGI K  +A +++      FE   F  NVRE 
Sbjct: 201 GIEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREE 260

Query: 215 EETGGIKDLQKKLLSELSK---DGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
               G+  ++KKL S L K   D       +   RL R K  IV DDV +          
Sbjct: 261 STRCGLNVVRKKLFSTLLKLGLDAPYFETPTFKKRLERAKCLIVLDDVATLEQAENLKIG 320

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSRVI+TTRD+++         Y +KEL   ++ +LFC  AF   H    + EL+  
Sbjct: 321 LGLGSRVIVTTRDRKICHQFEGFVVYEVKELNEDESLQLFCCNAFQEKHAKEGYEELSKS 380

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
           AI Y +G PLALKVLG     +SKE  ES + K++ IP+  I +VLK+S+  LD +Q+++
Sbjct: 381 AIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDVLKLSFYDLDRTQRDI 440

Query: 379 FLDIACFLEGE--------HRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
           FLDIACF   +         R+ +I +F+A              KSL+      +I MHD
Sbjct: 441 FLDIACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQIEMHD 500

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L+ +MGREIV++E+   PGKR+RLW  + IY+V K N GT+A+E I  D +K+  +++++
Sbjct: 501 LVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIG-DVYLS 559

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKL 532
           S +F  M  LR L      N+C   HL EG+ +   ++R+L W   PL++L    CA+ L
Sbjct: 560 SRSFESMINLRLLHI---ANECNNVHLQEGLEWLSDKLRYLHWESFPLESLPSTFCAQNL 616

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK-GT 591
           V L M  +K+ +LWD +Q+L  +L   K   + ++I+   L R P    NL+ L++    
Sbjct: 617 VQLSMTHSKLRKLWDRIQKL-DNLTIIKLDNSEDLIEIPDLSRAP----NLKILSLAYCV 671

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ +L  S+     ++ L L     +E +   I H   L  L ++ C  L         +
Sbjct: 672 SLHQLHPSIFSAPKLRELCLKGCKKIESLVTDI-HSKSLQRLDLTDCSSLVQFCVTSEEM 730

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
             LS R  T        +   SS++  N     KLD  +L +  K  ++   L  +RG++
Sbjct: 731 KWLSLRGTT--------IHEFSSLMLRN----SKLDYLDLGDCKKLNFVGKKLSNDRGLE 778



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 21/204 (10%)

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAEKLVSLKMPCTKVE 543
           PKLR L   G K   + S +  +    ++ L+   C  L    + +E++  L +  T + 
Sbjct: 684 PKLRELCLKGCKK--IESLVTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIH 741

Query: 544 QLWDDVQRLPSSLCTFKTPITF-EIIDCKML----ERLPDE--LENLEYLTVKG-TTIRE 595
           +         SSL    + + + ++ DCK L    ++L ++  LE+L  L + G T I  
Sbjct: 742 EF--------SSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINT 793

Query: 596 LPES--LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
           L  S  L    ++K L L N  NLE +P++I++   L  L +  C  L +LP+LP +L  
Sbjct: 794 LSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLPKLPASLEE 853

Query: 654 LSARNCTSLEKLPAGLSSMSSVLY 677
           LSA NCT L+        + ++LY
Sbjct: 854 LSAINCTYLDTNSIQREMLENMLY 877


>gi|124359513|gb|ABN05946.1| TIR [Medicago truncatula]
          Length = 1230

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 281/780 (36%), Positives = 414/780 (53%), Gaps = 93/780 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG+DTR  FTSHL+  L    +KTFIDD +L +GD IS +L+  IE SC +I+
Sbjct: 124 FDVFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEISSALIKAIEESCASIV 183

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I SE YASS+W                      FY +DPSHVR Q  S+G+ F++  K  
Sbjct: 184 ILSENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQIGSYGQAFAKYEKNL 243

Query: 100 PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD--ATFQSKNKGLV 154
             K   +++WK+ALTE + LSG+DS   R ES  I++I  DVL++L+    F++ NK LV
Sbjct: 244 RHKKDNLQKWKDALTEVSKLSGWDSKNSRIESDFIKDIVKDVLEKLNHGRPFEA-NKELV 302

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+E   EEIE L   GS  V  L +WG+GGI K  +A +++      FE   F  NVRE 
Sbjct: 303 GIEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREE 362

Query: 215 EETGGIKDLQKKLLSELSK---DGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
               G+  ++KKL S L K   D       +   RL R K  IV DDV +          
Sbjct: 363 STRCGLNVVRKKLFSTLLKLGLDAPYFETPTFKKRLERAKCLIVLDDVATLEQAENLKIG 422

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSRVI+TTRD+++         Y +KEL   ++ +LFC  AF   H    + EL+  
Sbjct: 423 LGLGSRVIVTTRDRKICHQFEGFVVYEVKELNEDESLQLFCCNAFQEKHAKEGYEELSKS 482

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
           AI Y +G PLALKVLG     +SKE  ES + K++ IP+  I +VLK+S+  LD +Q+++
Sbjct: 483 AIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDVLKLSFYDLDRTQRDI 542

Query: 379 FLDIACFLEGE--------HRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
           FLDIACF   +         R+ +I +F+A              KSL+      +I MHD
Sbjct: 543 FLDIACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQIEMHD 602

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L+ +MGREIV++E+   PGKR+RLW  + IY+V K N GT+A+E I  D +K+  +++++
Sbjct: 603 LVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIG-DVYLS 661

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKL 532
           S +F  M  LR L      N+C   HL EG+ +   ++R+L W   PL++L    CA+ L
Sbjct: 662 SRSFESMINLRLLHI---ANECNNVHLQEGLEWLSDKLRYLHWESFPLESLPSTFCAQNL 718

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK-GT 591
           V L M  +K+ +LWD +Q+L  +L   K   + ++I+   L R P    NL+ L++    
Sbjct: 719 VQLSMTHSKLRKLWDRIQKL-DNLTIIKLDNSEDLIEIPDLSRAP----NLKILSLAYCV 773

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ +L  S+     ++ L L     +E +   I H   L  L ++ C  L         +
Sbjct: 774 SLHQLHPSIFSAPKLRELCLKGCKKIESLVTDI-HSKSLQRLDLTDCSSLVQFCVTSEEM 832

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
             LS R  T        +   SS++  N     KLD  +L +  K  ++   L  +RG++
Sbjct: 833 KWLSLRGTT--------IHEFSSLMLRN----SKLDYLDLGDCKKLNFVGKKLSNDRGLE 880



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 565 FEIIDCKML----ERLPDE--LENLEYLTVKG-TTIRELPES--LGRLSWVKRLILSNNS 615
            ++ DCK L    ++L ++  LE+L  L + G T I  L  S  L    ++K L L N  
Sbjct: 858 LDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDSARFLKYLNLRNCC 917

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
           NLE +P++I++   L  L +  C  L +LP+LP +L  LSA NCT L+        + ++
Sbjct: 918 NLETLPDNIQNCLMLRSLHLDGCINLNSLPKLPASLEELSAINCTYLDTNSIQREMLENM 977

Query: 676 LY 677
           LY
Sbjct: 978 LY 979


>gi|357514699|ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521660|gb|AET02114.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1184

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 267/722 (36%), Positives = 407/722 (56%), Gaps = 85/722 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRGEDTR NFTS LH  L    I+T+ID ++ +G+ + + L   I+AS + +++
Sbjct: 15  HDVFISFRGEDTRTNFTSFLHAALCKNHIETYIDYRIEKGEEVWEELERAIKASALFLVV 74

Query: 62  FSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           FSE YASS W                        FYR++PSHVRKQ+ S+    ++ +K+
Sbjct: 75  FSENYASSTWCLNELVEIMKCKKNDEDNVVVIPVFYRIEPSHVRKQTGSYHTALAKQKKQ 134

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +K++RWKNAL E A+LSGFDS+  R ES LI +I   VL++L+  + ++ + L   + 
Sbjct: 135 GKDKIQRWKNALFEVANLSGFDSSTYRTESDLIGDIIKAVLQKLNQKYTNELRCLFIPDE 194

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
               IES L   S  V  + IWG+GGI K T+A A+F K+S  +EGS F  NV E  +  
Sbjct: 195 DYSSIESFLKDDSREVRTIGIWGMGGIGKTTLAAAIFQKVSSRYEGSCFLENVTEESKRH 254

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDV------------ 259
           G+     +LLS+L   G   +IE+        + RL R K  IV DDV            
Sbjct: 255 GLSYTYNRLLSKLL--GEDLHIETPKVISSMVMKRLKRMKAFIVLDDVRILELLNNLIGA 312

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GSRVI+TTRDK VL     ++ + ++++   ++ +LF   AF     +  + E
Sbjct: 313 GHDCLGAGSRVIVTTRDKYVLTGGGIDEIHEVEKMNSQNSIRLFSLNAFNKILPNEGYEE 372

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +++  + Y +G PLALKVLG +L  +SK+ W SA+ KL+ IP+ EI++VL++SYD LDD+
Sbjct: 373 ISNNVVSYTEGNPLALKVLGSFLRTKSKKEWNSALNKLKKIPNAEIQKVLRLSYDELDDT 432

Query: 375 QKNVFLDIACFLEGEHRD----EVISIFD----------ASKSLINLDLFYRIRMHDLLR 420
           +K++FLDIACF +G  R     +++++ D           +K+L+ +     I+MHDLL+
Sbjct: 433 EKDIFLDIACFFKGCGRSSRVTKILNVCDFFADIGIRNLLNKALVTITSTNDIQMHDLLQ 492

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGR+IVR+ESI +PG+R+RLW+  +I  VL  N GT A+E I LDM+++ R I+++S A
Sbjct: 493 EMGRQIVREESIKNPGQRSRLWNASEICDVLTNNNGTSAVESICLDMDQITR-INLSSKA 551

Query: 481 FSKMPKLRFLRF-YGDKNKCMVSHL---EGVPF--AEVRHLEWPQCPLKTL--NICAEKL 532
           F+KMP LR L F Y +++   ++++   EG+ F    +R  EW   PL  L  N     L
Sbjct: 552 FTKMPNLRLLAFKYHNRDVKGINYVHLPEGLDFLPNNLRSFEWSAYPLNYLPSNFSPWNL 611

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLTV 588
           V L +P + +E+LW+  Q LP SL       +  +I+C      P+    +L N E ++ 
Sbjct: 612 VELHLPYSNLEKLWNGTQNLP-SLERIDLRWSAHLIECPKFSNAPNLYGIDLGNCESISH 670

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
              +I  LP    +L W   L +S   +LE +  S R  S+ + L    C  LQ    +P
Sbjct: 671 VDPSIFNLP----KLEW---LDVSGCKSLESLYSSTRSQSQAS-LLADRCYNLQEFISMP 722

Query: 649 CN 650
            N
Sbjct: 723 QN 724


>gi|93117599|gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 264/736 (35%), Positives = 405/736 (55%), Gaps = 102/736 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R  FT HL+       I TF D +++ RG+ IS+ L   I+ S I+++
Sbjct: 52  YDVFLSFRGEDNRKTFTDHLYAAFVQAGIHTFRDQNEIPRGEEISKHLHKAIQESKISVV 111

Query: 61  IFSERYASSRW------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKN 108
           +FS+ YASSRW             FY +DPS VRKQ+ SF + F R  + F EK+K W+ 
Sbjct: 112 VFSKGYASSRWSKNRKTDQIVLPIFYDIDPSEVRKQTGSFAKAFHRHEEAFTEKVKEWRK 171

Query: 109 ALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESL 166
           AL EA +LSG++ N +    ESK I+EI  DVL +LD  + +    LVG++  +  I   
Sbjct: 172 ALEEAGNLSGWNLNDMENGHESKFIQEIVKDVLNKLDPKYINVATHLVGIDPLVLAISDF 231

Query: 167 LCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQK 225
           L   ++ V  + I G+ GI K +IA  VFN+    FEGS F  N+ E +E++ G+  LQ+
Sbjct: 232 LSTAADEVRIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSEQSNGLVLLQE 291

Query: 226 KLLSELSKDG--NMRNIESQL----NRLARKKVRIVFDDVT----------------SGS 263
           +LL ++ K    N+ N+   L     R+  K+V +V DD+                  GS
Sbjct: 292 QLLHDILKQNTVNISNVVRGLVLIKERICHKRVLVVVDDLAHQNQLNALMGERSWFGPGS 351

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
           RVIITT+D+ +L     ++ YR++EL   ++ +LF   AFG       ++EL++  + Y 
Sbjct: 352 RVIITTKDEHLLLK--VDRTYRVEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDYC 409

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ-KNVFLDI 382
            G+PLAL+VLG  L G+++  W+  + +L  IP+ EI++ L+IS+DSLDD + +N FLDI
Sbjct: 410 GGLPLALEVLGSCLSGKNRARWKCLIDELRKIPNREIQKKLRISFDSLDDHELQNTFLDI 469

Query: 383 ACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLLRDMGREIVR 428
           ACF  G +++ V  + +A               +SLI +D F +I MHDLLRDMGR+I+ 
Sbjct: 470 ACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDLLRDMGRDIIH 529

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           KES  HPGKR+R+W  +D + VL K+ GTE +EG++LD  + + +  +++ +F+KM  L+
Sbjct: 530 KESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDA-RASEDKSLSTGSFTKMRFLK 588

Query: 489 FLRFYGDKNKCMVSHLEGVPFA----EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
            L+  G        HL G PF     E+  + W +CPLK+   ++  + LV L M  + +
Sbjct: 589 LLQING-------VHLTG-PFKLLSEELIWICWLECPLKSFPSDLMLDNLVVLDMQHSNI 640

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGR 602
           ++LW + + L       K  I   +   K L + P    NL                   
Sbjct: 641 KELWKEKKILN------KLKI-LNLSHSKHLIKTP----NLHS----------------- 672

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---C 659
            S +++L+L   S+L  + +S+ HL  L  L +  C R++ LPE  C++  L + N   C
Sbjct: 673 -SSLEKLMLEGCSSLVEVHQSVGHLKSLILLNLKGCWRIKILPESICDVNSLKSLNISGC 731

Query: 660 TSLEKLPAGLSSMSSV 675
           + LEKLP  +S + S+
Sbjct: 732 SQLEKLPERMSDIKSL 747



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 19/158 (12%)

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
            G LS ++ L LS N  L  +P  I  L+KL  L + +C  L ++ ELP +L  L A +C
Sbjct: 839 FGGLSSLQELNLSGNKFLS-LPSGISVLTKLQHLRVQNCSNLVSISELPSSLEKLYADSC 897

Query: 660 TSLEKLPAGLSSMSS-VLYVNLCNFLKLDPNELSEIVKDGWM-------------KHSLY 705
            S++++   + S ++ +L +  C  L ++   +  +   GW+             K S  
Sbjct: 898 RSMKRVCLPIQSKTNPILSLEGCGNL-IEIQGMEGLSNHGWVIFSSGCCDLSNNSKKSFV 956

Query: 706 E---ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRP 740
           E     G    ++F G  +P W      GSS +    P
Sbjct: 957 EALRSGGYGYQIHFDGGTMPSWLSFHGEGSSLSFHVPP 994


>gi|359493572|ref|XP_002270741.2| PREDICTED: uncharacterized protein LOC100261885 [Vitis vinifera]
          Length = 2338

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 274/732 (37%), Positives = 396/732 (54%), Gaps = 90/732 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I+TF DD+ L RG+ I+  LL  IE S  AI+
Sbjct: 14  YDVFLSFRGEDTRRNFTDHLYKALIHSGIRTFRDDEELRRGEEIAPELLKAIEESRSAIV 73

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FSE YA S+W                       FY VDPS VR Q+  +G  F+   K 
Sbjct: 74  VFSETYARSKWCLEELVKIMKCKEEREQMVVIPIFYHVDPSEVRNQTEIYGEAFTHHEKN 133

Query: 99  FPE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
             E    K+++WK AL +A++L+G+D+   R ES+LI+EI  +VL+    T    N+ +V
Sbjct: 134 AEEERKEKIRKWKTALRQASNLAGYDATN-RYESELIDEIIENVLRSFPKTL-VVNENIV 191

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR-E 213
           G++  +E + SLL I    V  + ++G+GGI K TI  A++N+IS  FE      +VR E
Sbjct: 192 GMDSRLERLISLLKIELNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKE 251

Query: 214 AEETGGIKDLQKKLLSELSKDGN---MRNIESQL----NRLARKKVRIVFDDVTS----- 261
           + E  G+  LQ++LL++  +      +R++   +    ++L+ KKV +  DDV       
Sbjct: 252 STENSGLLKLQQQLLNDTLRTTRKIVLRDVHEGIKEIRDKLSSKKVLVFLDDVDELTQLE 311

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSR+IITTR K +L     N  Y +++L + +A +LFC++AF   H   
Sbjct: 312 HLIGKHDWFGPGSRIIITTRKKDLLTRHEVNDMYEVEKLYFHEALQLFCRYAFKQHHPKE 371

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            + +L+ + ++YA G+PLALKVLG  L G+    W+S ++KLE +P++EI +VLKIS+D 
Sbjct: 372 GYGDLSHQVVQYADGLPLALKVLGSLLFGKRLPDWKSELQKLEKVPNMEIVKVLKISFDG 431

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
           LD +Q+ +FLDIACF  G+    V  I DAS             +  I +    RI MHD
Sbjct: 432 LDYTQRMIFLDIACFFRGDDVKRVSRILDASEFNAESGINALVDRCFITISKDNRIDMHD 491

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL  MG+ IV +E  N PG+R+RLW H DIY+VLK+NTGTE IEGI L ++K + +I   
Sbjct: 492 LLAQMGKGIVDQECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYLHVDK-SEQIQFT 550

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           S AF +M +LR L      N   +S     P+ ++ +L W    L++L  N  A  LVSL
Sbjct: 551 SKAFERMHRLRLLSI--SHNHVQLSKDFVFPY-DLTYLRWNGYSLESLPSNFHANNLVSL 607

Query: 536 KMPCTKVEQLW--------------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE 581
            +  + ++ LW               D Q+L         P   E+I    +  L   + 
Sbjct: 608 ILGNSNIKLLWKGNMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSGCIILLKSNIA 667

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            LE L +  T I+ELP S+  L  ++ L L N  NLE +P SI +L  L  L +  C +L
Sbjct: 668 KLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKL 727

Query: 642 QTLPE----LPC 649
             LPE    +PC
Sbjct: 728 DRLPEDLERMPC 739



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 14/178 (7%)

Query: 586  LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            L +KG+ I ELP     L +   L L    NLER+P SI  L  LT L  S C RL++ P
Sbjct: 1562 LCLKGSAINELPTIECPLEF-DSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSFP 1620

Query: 646  ELPCNLGLLSARNC----TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG-WM 700
            E+  ++  L  RN     T++++LPA +  +  +  +NL +   LD     E   +G ++
Sbjct: 1621 EILEDVENL--RNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLDLKH--EKSSNGVFL 1676

Query: 701  KHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
             +S Y   GI   +  PG+  IPKW R+Q  G   T++  P      +  +  A C V
Sbjct: 1677 PNSDYIGDGI--CIVVPGSSGIPKWIRNQREGYRITMEL-PQNCYENDDFLGIAICCV 1731



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 6/112 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLS 604
            +++ LP+S+  FK+  +     C  L+  P+ LEN+E L    +  T I+ELP S+  L+
Sbjct: 1116 NLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLN 1175

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
             ++ L L     L  +PESI +L  L  L +S+C +L  LP+   NLG L +
Sbjct: 1176 RLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCSKLHKLPQ---NLGRLQS 1224



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 168/427 (39%), Gaps = 83/427 (19%)

Query: 472  REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQ----CPLKTLNI 527
            RE+H+N  A  ++P                S +E +   EV +LE  +     P    N+
Sbjct: 1155 RELHLNETAIKELP----------------SSIEHLNRLEVLNLEGCKKLVTLPESICNL 1198

Query: 528  CAEKLVSLKMPCTKVEQLWDDVQRLPS--------------------SLCTFKTPITFEI 567
            C  +++ +   C+K+ +L  ++ RL S                     LC+ K  I   +
Sbjct: 1199 CFLEVLDVSY-CSKLHKLPQNLGRLQSLKHLCACGLNSTCCQLVSLLGLCSLKNLI---L 1254

Query: 568  IDCKMLER--LPDE--LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIP 621
               K+++   L D   L +LE L +    I E  +P  +  LS ++ L LS N     IP
Sbjct: 1255 PGSKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHLSGNL-FRSIP 1313

Query: 622  ESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC 681
              +  LS L  L + HC+ L+ +P LP +L +L    C  LE       + S +L+ +L 
Sbjct: 1314 SGVNQLSMLRILNLGHCQELRQIPALPSSLRVLDVHECPWLE-------TSSGLLWSSLF 1366

Query: 682  NFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN-EIPKWFRHQSMGSSATLKTRP 740
            N  K        +++D   +    +    + ++   G+  IPKW  H   G+    K  P
Sbjct: 1367 NCFK-------SLIQDFECRIYPRDSLFARVNLIISGSCGIPKWISHHKKGAKVVAKL-P 1418

Query: 741  PRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFL 800
                  N L+ F      V  +      ++S E   +   Y  C    R  E    S F+
Sbjct: 1419 ENWYKNNDLLGF------VLYSLYDPLDNESEETLENDAAYLKCSLTLRAHE----SQFV 1468

Query: 801  GKISYVESDHVFLGCNSFGGEYFGPNYDEFSF------RIHCSFHFPPYLERGEVKKCGI 854
             ++ +  S   +         Y+     E  +      ++  SF    + +  +V++CGI
Sbjct: 1469 DELQFYPSFRCYDVVPKMWMIYYAKVVIEKKYHSNKWRQLTASFCGFSHGKAMKVEECGI 1528

Query: 855  HFVYAQD 861
            H +YA D
Sbjct: 1529 HLIYAHD 1535



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P  +  LS +++L+L+ N     IP  +  LS L  L + HC+ L+ +P LP +L +L 
Sbjct: 2022 IPTEICHLSSLRQLLLTGNL-FRSIPSGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLD 2080

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY 715
               CT LE       + S +L+ +L N  K        +++D   +    E R  +  + 
Sbjct: 2081 VHECTRLE-------TSSGLLWSSLFNCFK-------SLIQDFECRIYPRENRFARVHLI 2126

Query: 716  FPGN-EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAF 754
              G+  IPKW  H   G+    +  P      N L+ F  
Sbjct: 2127 ISGSCGIPKWISHHKKGAKVVAEL-PENWYKNNDLLGFVL 2165



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 510  AEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID 569
            + +  L   +CPL+  ++C  +  +L              +RLPSS+C  K+  T     
Sbjct: 1567 SAINELPTIECPLEFDSLCLRECKNL--------------ERLPSSICELKSLTTLNCSG 1612

Query: 570  CKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLE 618
            C  L   P   +++ENL  L + GT I+ELP S+  L  ++ L L++ +NL+
Sbjct: 1613 CSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLD 1664



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 560  KTPITFEIIDCKMLERLPDELENLEY--LTVKGTTIRELPESLGRLSWVKRLILSNNSNL 617
            + PI  +  D     R  D   N+E+  L +KG TI  LP  +   S    L L    NL
Sbjct: 1852 QDPIVVQTEDVDA--RCLDCQRNVEHRKLCLKGQTISLLP--IEHASEFDTLCLRECKNL 1907

Query: 618  ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSV 675
            E +P SI     L  LF SHC +LQ  PE+  N+  L     N T++++LP+ +  ++ +
Sbjct: 1908 ESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRL 1967

Query: 676  LYVNL 680
              +NL
Sbjct: 1968 EVLNL 1972



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 582  NLEY--LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            N+E+  L +KG  I  LP  +   S    L L    NLE +P SI     L  LF SHC 
Sbjct: 1082 NVEHRKLCLKGQPISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCS 1139

Query: 640  RLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
            +LQ  PE+  N+  L     N T++++LP+ +  ++ +  +NL
Sbjct: 1140 QLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNL 1182


>gi|359495272|ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 313/992 (31%), Positives = 482/992 (48%), Gaps = 159/992 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFT+HL   L  K I TF D D+L +G  IS +L+  IE S  +II
Sbjct: 12  YDVFLSFRGDDTRNNFTAHLLQELRTKGINTFFDEDKLEKGRVISPALITAIENSMFSII 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY VDPS VR     FG   ++  +  
Sbjct: 72  VLSENYASSRWCLEEMVKILECNRSKEERVLPIFYNVDPSDVRNHMGKFGEALAKHEENL 131

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK-GLVG 155
            E   ++K W++ALTE A+LSG+DS   + E  LI+EI   +LK+L  T+ S  +  LVG
Sbjct: 132 EENGERVKIWRDALTEVANLSGWDSRN-KNEPLLIKEIVIKLLKKLLNTWTSDTEENLVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  I+++  LLC+ S+ V  + I G+GGI K T+A A+++++S  FE   F L +    
Sbjct: 191 IQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSF-LEIANDF 249

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS------------ 261
           +   +  L +KLLS+L ++ N++     S   RL  +KV +V D+V +            
Sbjct: 250 KEQDLTSLAEKLLSQLLQEENLKIKGSTSIKARLHSRKVLVVLDNVNNLTILEHLAGNQD 309

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+I+TTRD+++L     +  Y + E    +A +     +   + L+    EL+ 
Sbjct: 310 WFGQGSRIIVTTRDQRLLIQHKVDY-YEVAEFNGDEAFEFLKHHSLKYELLENDLQELSR 368

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + I YA+G+PLAL+VLG  L G +K+ W   + KL+  P++EI+EVL++SYD LDD +KN
Sbjct: 369 EIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEVLRLSYDRLDDEEKN 428

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACF +GE +D V+ I                +KSLI ++   ++ MHDL+++MG+
Sbjct: 429 IFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLIQEMGK 488

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
            IVR+E    P +R+RLW H+DI+ VLK+N G+E IEGI L+++ +   +     AF+ M
Sbjct: 489 GIVRQECPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGIFLNLSHLEDTLDFTIEAFAGM 548

Query: 485 PKLRFLRFYGDKN-------------KCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NI 527
            KLR L+ Y  K+              C V       F   ++R+L W    LK+L  + 
Sbjct: 549 KKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFCSNDLRYLYWHGYSLKSLPKDF 608

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEY 585
             + LV L MP + +++LW  ++ L       +   + ++   K L + PD   + NLE 
Sbjct: 609 SPKHLVELSMPYSHIKKLWKGIKVL-------ERLKSIDLSHSKYLIQTPDFSGITNLER 661

Query: 586 LTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L ++G   + ++  SLG L  +  L L N + L R+P S   L  L    +S C + +  
Sbjct: 662 LVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKSLETFILSGCSKFEEF 721

Query: 645 PELPCNLGLLSARNCTSLEKLP------------AGLSSMSSVLYVNLC--NFLKLDPNE 690
           PE   NL +L   +   +  L             +GL  + S+ ++NL   NF+ L PN 
Sbjct: 722 PENFGNLEMLKELHADGIVNLDLSYCNISDGANVSGLGFLVSLEWLNLSGNNFVTL-PNM 780

Query: 691 LS----EIVKDGWMK--HSLYEERGIKKSM---------------------------YFP 717
                 E ++ G  K   +L +     +S+                             P
Sbjct: 781 SGLSHLETLRLGNCKRLEALSQLPSSIRSLNAKNCTSLGTTELLNLLLTTKDSTFGVVIP 840

Query: 718 GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWD 777
           G+ IP W R+QS  S   ++   P     N L    F   +VF       R     DDW 
Sbjct: 841 GSRIPDWIRYQS--SRNVIEADLPLNWSTNCL---GFALALVFGG-----RFPVAYDDWF 890

Query: 778 -GNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFS----F 832
              V+      +R  E  + S+ +    + E DHV L         F P     S     
Sbjct: 891 WARVFLDFGTCRRSFETGI-SFPMENSVFAEGDHVVLT--------FAPVQPSLSPHQVI 941

Query: 833 RIHCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
            I  +F         E+K+CG+  +Y  +  +
Sbjct: 942 HIKATFAIMSVPNYYEIKRCGLGLMYVNEEVN 973


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 281/777 (36%), Positives = 425/777 (54%), Gaps = 93/777 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG DTR++ TSHL+  L    I  +ID++L  G+ I  +LL  IE SCI+++I
Sbjct: 14  HDVFLSFRGTDTRNSVTSHLYDALKRNHIDAYIDNKLDGGEKIEPALLERIEESCISLVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR-LRKRF 99
           FSE+YA S +                      FYR+DPSHV+  + S+G    R  R   
Sbjct: 74  FSEKYADSTFCLRELSKILECKETKGQMVLPVFYRLDPSHVQNLTGSYGDALCRHERDCC 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD--ATFQSKNKGLVGVE 157
            ++++ W++A  E A+L G+DSNVI+ E+KLI+EI +D+ K+L+   +     + LVG+E
Sbjct: 134 SQEVESWRHASKEIANLKGWDSNVIKDETKLIQEIVSDIQKKLNHAPSPSIDAERLVGME 193

Query: 158 CSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             +E+IESLL  GS G V  + IWG+ GI K T A AV+++    FEG  F  NVRE  +
Sbjct: 194 SRVEDIESLLSFGSTGTVLIVGIWGMCGIGKSTTAEAVYHRNRSKFEGHCFFQNVREESQ 253

Query: 217 TGGIKDLQKKLLSELSKDGNM----RNIESQLNR-LARKKVRIVFDDVT----------- 260
             G+  +++++L  +    ++    + + S + R L RKKV IVFDDV            
Sbjct: 254 KHGVDQVRQEILGMVLGKNDLKICGKVLPSAIKRMLQRKKVLIVFDDVDDARDLKYLLGE 313

Query: 261 -----SGSRVIITTRDKQVLKN-CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 GSR+I+T+RD+QVL N C  +K Y++K LV  DA +LF   AF  ++    +I 
Sbjct: 314 DGLFGQGSRIIVTSRDRQVLINACDEDKIYQVKILVKEDALRLFSLHAFKQNNPIEGYIG 373

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGR-SKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L+   +   QG+PL L+VLG  L  + S E WES + +L      +I++ L++ Y  LD 
Sbjct: 374 LSKTVVSCVQGIPLVLEVLGASLYKKTSLEYWESKVAQLRTTGGEDIKKCLEMCYHELDQ 433

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASKS-----LINLDLFY----RIRMHDLLRDMGR 424
           ++K +FLDIACF     RD +    D  +S     L ++ L      +I MHD+L  +G+
Sbjct: 434 TEKKIFLDIACFFGRCKRDLLQQTLDLEESSGIDRLADMCLIKIVQDKIWMHDVLLILGQ 493

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVL-KKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           EIV +E+++ P +R+RLW  +D+ +VL  + T    +E ISL ++   +E+ ++  AF  
Sbjct: 494 EIVLRENVD-PRERSRLWRAEDVCRVLTTQGTTGSKVESISLILD-ATKELRLSPTAFEG 551

Query: 484 MPKLRFLRFY-------GDKNKCMVS-----HL-EGVPF--AEVRHLEWPQCPLKTL--N 526
           M  LR L+ Y         K K M+      HL  G+ F  +E+R L W   PLK+L  N
Sbjct: 552 MYNLRLLKIYYPPFLKDPSKEKIMIRTRIGIHLPRGLHFLSSELRFLYWYNYPLKSLPSN 611

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENL 583
              EKLV L+MPC+++EQLW++ Q       T+         DC  L  LP+   EL++L
Sbjct: 612 FFPEKLVQLEMPCSQLEQLWNEGQ-------TYHIRAFHHSKDCSGLASLPNSIGELKSL 664

Query: 584 EYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
             L +KG + +  LP+S+G L  +  L L + S L  +P+SI  L  L  L++  C  L 
Sbjct: 665 TKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSIGELKSLDSLYLGGCSGLA 724

Query: 643 TLPELPCNLGLLSA---RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
           TLPE    L  L +   R C+ L  LP  +  + S+  LY+  C+ L   P+ + E+
Sbjct: 725 TLPESIGELKSLDSLYLRGCSGLASLPDSIGELKSLDSLYLGGCSGLATLPDSIGEL 781



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 23/193 (11%)

Query: 584  EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            E+L ++ + + + PESLG L  + +L LS   + ERIP SI+HL+ L  L++  C+ LQ 
Sbjct: 978  EFLNLENSRVLKTPESLGSLVSLTQLTLSK-IDFERIPASIKHLTSLHNLYLDDCKWLQC 1036

Query: 644  LPELPCNLGLLSARNCTSLEKLPAGLSS-----MSSVLYVNLCNFLKLDPNELSEIVKDG 698
            LPELP  L +L A  C SL+ + +          ++    N    L+LD N  + I+   
Sbjct: 1037 LPELPLTLQVLIASGCISLKSVASIFMQGDREYKAASQEFNFSECLQLDQNSRTRIMGAA 1096

Query: 699  -----WMKHSL----YEERGIKK-SMYFPGNEIPKWFRHQSM-GSSATLKTRPPRPAGYN 747
                  M  SL    Y  + +K+  +  PG+E+P+WF +++  GSS  +     +PA ++
Sbjct: 1097 RLRIQRMATSLFSLEYHGKPLKEVRLCIPGSEVPEWFSYKNREGSSVKIW----QPAQWH 1152

Query: 748  KLISFAFCAVVVF 760
            +   F FCAVV F
Sbjct: 1153 R--GFTFCAVVSF 1163



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 21/174 (12%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT----------IRELPE 598
           LP S+   K+  +  +  C  L  LP+   EL++L+ L ++G +          +  LP+
Sbjct: 798 LPDSIGELKSLDSLYLGGCSGLASLPNSIGELKSLDSLYLRGCSGLASLPDSIGLASLPD 857

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
           S+G L  +  L LS+   LE +P+SI  L  L++L++  C RL TLP     +G L + +
Sbjct: 858 SIGELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPN---KIGELKSLD 914

Query: 659 CTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK 712
              LE   +GL+S+ +    N+C+ L   PN +  +   G  K   Y   G +K
Sbjct: 915 KLCLEGC-SGLASLPN----NICSGLASLPNNIIYLEFRGLDKQCCYMLSGFQK 963


>gi|124360568|gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 287/805 (35%), Positives = 419/805 (52%), Gaps = 119/805 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG+DTR  FTSHL+  L    +KTFIDD +L +GD IS +L+  IE SC +I+
Sbjct: 124 FDVFISFRGDDTRRKFTSHLNEALKKSGVKTFIDDSELKKGDEISSALIKAIEESCASIV 183

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSE YASS+W                      FY +DPSHVR Q  S+G+ F++  K  
Sbjct: 184 IFSEDYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRNQIGSYGQAFAKHEKNL 243

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIR-----------------------------PESKL 130
             K ++WK+ALTE ++LSG+DS   R                              ES  
Sbjct: 244 --KQQKWKDALTEVSNLSGWDSKSSRWWCSGHKLEIRLPAVVYGEAMALIGGASMIESDF 301

Query: 131 IEEIANDVLKRLDATFQSK-NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKIT 189
           I++I  DVL++L+     + NK LVG+E   EEIE L   GS  V  L +WG+GGI K  
Sbjct: 302 IKDIVKDVLEKLNQRRPVEANKELVGIEKKYEEIELLTNNGSNDVRTLGLWGMGGIGKTA 361

Query: 190 IAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDG-NMRNIESQL--NR 246
           +A  +++     FE   F  NVRE     G+K ++KKL S L K G +    E+ +   R
Sbjct: 362 LAKKLYDNYCSQFEYHCFLENVREESTKCGLKVVRKKLFSTLLKLGHDAPYFENPIFKKR 421

Query: 247 LARKKVRIVFDDVTS-------------GSRVIITTRDKQVLKNCWANKKYRMKELVYAD 293
           L R K  IV DDV +             GSRVI+TTRD Q+           +K+L   +
Sbjct: 422 LERAKCLIVLDDVATLEQAENLKIGLGPGSRVIVTTRDSQICHQFEGFVVREVKKLNEDE 481

Query: 294 AHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE 353
           + +LF   AF   H    + EL+  AI Y +G PLALKVLG  LC +SKE WES + K++
Sbjct: 482 SLQLFSCNAFQEKHAKEGYEELSKSAIGYCRGNPLALKVLGANLCAKSKEAWESELEKIK 541

Query: 354 IIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG--------EHRDEVISIFDAS---- 401
            IP+  I +VLK+S+  LD +Q+++FLDIACF             R+ +I +F+A     
Sbjct: 542 EIPYAGIHDVLKLSFYDLDRTQRDIFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYP 601

Query: 402 ---------KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
                    KSL+      RI+MHDL+ +MGREIV++E+   PGKR+RLW  + IY+V K
Sbjct: 602 ATSIEVLLHKSLMTFGYCDRIQMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFK 661

Query: 453 KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPFA- 510
            N GT+A+E I  D +K+  +++++S +F  M  LR L      NKC   HL EG+ +  
Sbjct: 662 YNKGTDAVEVILFDTSKIG-DVYLSSRSFESMINLRLLHI---ANKCNNVHLQEGLEWLS 717

Query: 511 -EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEI 567
            ++ +L W   PL++L    C +KLV L M  +K+ +LWD +Q+L  +L   K   + ++
Sbjct: 718 DKLSYLHWESFPLESLPSTFCPQKLVELSMTHSKLRKLWDRIQKL-DNLTIIKLDNSEDL 776

Query: 568 IDCKMLERLPDELENLEYLTVK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           I+   L R P    NL+ L++    ++ +L  S+     ++ L L   + +E +   I  
Sbjct: 777 IEIPDLSRAP----NLKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHS 832

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
            S LT L ++ C  L         +  LS R  T        +   SS++  N     KL
Sbjct: 833 KSLLT-LDLTDCSSLVQFCVTSEEMTWLSLRGTT--------IHEFSSLMLRN----SKL 879

Query: 687 DPNELSEIVKDGWMKHSLYEERGIK 711
           D  +LS+  K  ++   L  +RG++
Sbjct: 880 DYLDLSDCKKLNFVGKKLSNDRGLE 904



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 149/370 (40%), Gaps = 94/370 (25%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            CTK+E L  D+          K+ +T ++ DC  L +     E + +L+++GTTI E   
Sbjct: 820  CTKIESLVTDIHS--------KSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSS 871

Query: 599  SLGR--------LSWVKRL-----ILSNNSNLERIPESIRHLS----------------- 628
             + R        LS  K+L      LSN+  LE +  SI +LS                 
Sbjct: 872  LMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESL--SILNLSGCTQINTLSMSFILDGA 929

Query: 629  -KLTFLFISHCERLQTLPELPCNLGLLS------ARNCTSLEKLPAGLSSMSSVLYVNLC 681
              L FL++ +C  L+TLP+   N  +LS        N  SL KLPA L  +S++      
Sbjct: 930  RSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAI------ 983

Query: 682  NFLKLDPNELSEIVKDGWMKHSLYEER-GIKKSMYF----PGNEIPKWFRHQSMGSSATL 736
            N   LD N     ++   +K+ LY  R G     YF    P  E+P  F   +  +S  +
Sbjct: 984  NCTYLDTNS----IQREMLKNMLYRFRFGEPFPEYFLSLLPVAEVPWGFDFFTTEASIII 1039

Query: 737  KTRPPRPA-GYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL 795
               PP P  G N+++   F +  +   F       SG D         C  +      + 
Sbjct: 1040 ---PPIPKDGLNQIVLCVFLSEGLNLTF-------SGVD---------CTIYNHGDRSNE 1080

Query: 796  YSW-FLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE------ 848
            +S  F+     + SDHV L C+         + D +S     SF   PY + GE      
Sbjct: 1081 WSISFVNVSGAMISDHVLLICSPAICHQTRVDNDHYSL----SFEVKPYGKVGEQLSSTK 1136

Query: 849  -VKKCGIHFV 857
             +K CG+  V
Sbjct: 1137 GIKGCGVILV 1146


>gi|356495057|ref|XP_003516397.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1067

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 316/965 (32%), Positives = 459/965 (47%), Gaps = 175/965 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF++FRG+D RD F  +L      K I  FIDD+L +GD I  SL+G I+ S I++ I
Sbjct: 17  YDVFVNFRGKDIRDGFLGYLTRAFHQKQIYAFIDDKLEKGDEIWPSLVGAIQGSSISLTI 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE Y SSRW                      FY V+P+ VR Q  ++G   + L K++ 
Sbjct: 77  FSENYTSSRWCLEELVKILECREKYRQTVIPVFYGVNPTDVRHQKGNYGEALAVLGKKYN 136

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDV---LKRLDATFQSKNKGLVGV 156
              ++ W+NAL +AADLSG  S   + E  L+ EI N V   L  LD T     KG +G+
Sbjct: 137 LTTVQNWRNALKKAADLSGIKSFDYKTEVDLLGEIINTVNLVLISLD-THPFNIKGHIGI 195

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           E SI+ +ESLL   S+ V  + IWG+GGI K TIA  +F K+   ++  YF  N  E   
Sbjct: 196 EKSIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEMFKKLYSEYDSYYFLENEEEESR 255

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQL-NRLARK----KVRIVFDDVTS---------- 261
             G   L++KL S L  +    NI   L N + RK    KV IV DDV            
Sbjct: 256 KHGTISLKEKLFSALLGENVKMNILHGLSNYVKRKIGFMKVLIVLDDVNDSDLLEKLIGN 315

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTRDKQVL     +  Y +  L  ++A +LF  +AF  +HLD  + +L
Sbjct: 316 LDWFGRGSRIIITTRDKQVLIANKVDDIYHVGALNSSEALELFSFYAFNQNHLDMEYYKL 375

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + + + Y+QG+PL LKVLG  LCG+ KEVWES + KL+ +P+ +I   +++SYD LD  +
Sbjct: 376 SKRVVNYSQGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMPNTDIYNAMRLSYDDLDRKE 435

Query: 376 KNVFLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDL 418
           + + LD+ACF  G               E  D V+   +    K+LI +     I MHD+
Sbjct: 436 QKILLDLACFFMGLNLKVDHIKVLLKDSEKDDSVVVGLERLKDKALITISEDNIISMHDI 495

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +++M  EIVR+ESI  PG R+RL    DIY+VLK N GTEAI  I  DM+ V R++ ++ 
Sbjct: 496 IQEMAWEIVRQESIEDPGNRSRLMDPNDIYEVLKYNKGTEAIRSIRADMS-VIRKLQLSP 554

Query: 479 YAFSKMPKLRFLRF---YGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + F+KM KL+FL F   Y      ++ H L+  P  E+R++ W   PLK+L  N  A+ +
Sbjct: 555 HIFTKMSKLQFLYFPSKYNQDGLSLLPHGLQSFP-VELRYVAWMHYPLKSLPKNFSAKNI 613

Query: 533 VSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIIDCKMLERL--- 576
           V   + C++VE+LWD VQ L +              L         E++D  +  RL   
Sbjct: 614 VMFDLSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPDLSKATNLEVLDINICPRLTSV 673

Query: 577 -PDEL------------------------------------------ENLEYLTVKGTTI 593
            P  L                                          EN+  L +  T +
Sbjct: 674 SPSILSLKRLSIAYCSLTKITSKNHLPSLSFLNLESCKKLREFSVTSENMIELDLSSTRV 733

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             LP S GR S +K L L  +S +  +P S ++L++L +L +     L TL ELP +L  
Sbjct: 734 NSLPSSFGRQSKLKILRL-RDSGINSLPSSFKNLTRLQYLTVYKSRELCTLTELPLSLKT 792

Query: 654 LSARNCTSLEKL--PAGLSSM----SSVLYVNLCNFLKLDPNELSEIVKDGWMK------ 701
           L A +CTSL+ +  P+           VL+    N LKLD + L  I  +  +       
Sbjct: 793 LDATDCTSLKTVLFPSIAQQFKENRKEVLF---WNCLKLDEHSLKAIGLNAHINVMRFAY 849

Query: 702 -------------HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK-TRPPRPAGYN 747
                           YE   +K    +PG  +P+W  +++      +  +  P  +   
Sbjct: 850 QHLSAPDENYDDYDRTYESYQVK--YVYPGGIVPEWMEYKTTKDYIIIDLSSSPHSSQLG 907

Query: 748 KLISFAFCAVVVFPAF-LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYV 806
            + SF     +V      ++  + +  DD D N         +K    +Y      I +V
Sbjct: 908 FIFSFVISGPMVKAIMGYRFTFYITVSDDEDEN---------KKDSIDIY--MSDSIVWV 956

Query: 807 ESDHV 811
            SDHV
Sbjct: 957 ASDHV 961


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 280/768 (36%), Positives = 399/768 (51%), Gaps = 130/768 (16%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRGEDTR  FT HL   L  K IKTF DD  L RG  IS  L+  IE S  A+II 
Sbjct: 23  VFLSFRGEDTRRGFTDHLFASLERKGIKTFKDDHDLERGKAISVELMKAIEDSMFALIIL 82

Query: 63  SERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF---PEK 102
           S  YASS W                  F+ VDPS VR Q  SF + F    ++F    EK
Sbjct: 83  SPNYASSTWCLDELQKIVECEKEAFPIFHGVDPSDVRHQRGSFAKAFQEHEEKFREDKEK 142

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           ++RW++AL + A  SG+DS   + E+ LIE I   + K+L          LVGV+  ++E
Sbjct: 143 VERWRDALRQVASYSGWDSKD-QHEATLIETIVGQIQKKLIPRLPCFTDNLVGVDSRMKE 201

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD 222
           + SL+ I    +  + IWG+GGI K TIA  V+  +   F+ S F  N+RE  +T G+  
Sbjct: 202 LNSLVDIWLNDIRFIGIWGMGGIGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVH 261

Query: 223 LQKKLLSELS-KDGNMRNIESQ----LNRLARKKVRIVFDDVTS---------------- 261
           +QK++LS L+ +  +  N+        N L+ KKV +V DDV+                 
Sbjct: 262 IQKEILSHLNVRSNDFCNLYDGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGP 321

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+IITTRDK +LK    +  Y+ + L   +A +LFC  AF  D     ++ L    ++
Sbjct: 322 GSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVE 381

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           YA+G+PLAL+VLG +LCGRS EVW SA+ ++   PH +I++ LKISYDSL+ ++K +FLD
Sbjct: 382 YARGLPLALEVLGSHLCGRSTEVWHSALEQIRSFPHSKIQDTLKISYDSLEPTEKKLFLD 441

Query: 382 IACFLEGEHRDEVISIFD-------------ASKSLINLDLFY-RIRMHDLLRDMGREIV 427
           IACF  G   DEV++I +               +SL+ LD+   ++ MHDLL++MGR IV
Sbjct: 442 IACFFVGMDIDEVVNILENCGDHPIIGIDILIERSLVTLDMTKNKLGMHDLLQEMGRNIV 501

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM-NKVNREIHMNSYAFSKMPK 486
            +ES N PGKR+RLW  KDI  VL KN GT+ I GI L++    + E   N+ +FSK+ +
Sbjct: 502 YQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIRGIVLNLVQPYDCEARWNTESFSKISQ 561

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKMPCTKVEQ 544
           LR L+    +   +   L  +P A ++ + W  CPLKTL +  +  ++V LK+P +K+EQ
Sbjct: 562 LRLLKLCDMQ---LPRGLNCLPSA-LKVVHWRGCPLKTLPLSNQLDEVVDLKLPYSKIEQ 617

Query: 545 LW-----------------------------DDVQRLPSSLCTFKTPITFEII------- 568
           LW                              +++ L    CT  T +   ++       
Sbjct: 618 LWHGTELLEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTSLTEVHPSLVRHKKLVW 677

Query: 569 ----DCKMLERLP--------------------------DELENLEYLTVKGTTIRELPE 598
               DCK L+ LP                          + +E+L  L ++GT I +LP 
Sbjct: 678 LNFEDCKKLKTLPRKMEMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLCLEGTAITKLPT 737

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           SLG L  +  L   N  NL  +P++I  L  L  L +S C +L +LPE
Sbjct: 738 SLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKLSSLPE 785



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 26/186 (13%)

Query: 582  NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            NL Y  +   +    P     LS +  L L+ N N   +P  I  L+KL  L ++ C++L
Sbjct: 868  NLSYCNLSEES---FPGDFCSLSSLMILNLTGN-NFVSLPSCISKLAKLEHLILNSCKKL 923

Query: 642  QTLPELPCNLGLLSARNCTSLE------KLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
            QTLP+LP N+  L A NCTS E        P  L +  +  +          P EL  ++
Sbjct: 924  QTLPKLPSNMRGLDASNCTSFEISKFNPSKPCSLFASPAKWHF---------PKELESVL 974

Query: 696  K--DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
            +      K  L +ER     M   G+EIP WF      S A  K   P     N+ + FA
Sbjct: 975  EKIQKLQKLHLPKERF---GMLLTGSEIPPWFSRSKTVSFA--KISVPDDCPMNEWVGFA 1029

Query: 754  FCAVVV 759
             C ++V
Sbjct: 1030 LCFLLV 1035


>gi|357518219|ref|XP_003629398.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355523420|gb|AET03874.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1106

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 264/750 (35%), Positives = 406/750 (54%), Gaps = 101/750 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR  FTSHL+         T+ID ++ +GD++   L   I+ S I +++
Sbjct: 16  YDVFISFRGEDTRAGFTSHLYETFLQSKFHTYIDYRIQKGDHVWAELTKAIKQSTIFLVV 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY +DPS VRKQ+ S+G   ++ +K+  
Sbjct: 76  FSKNYASSTWCLNELVEIMECSNKDNVAVIPVFYHIDPSRVRKQTGSYGTALAKHKKQGC 135

Query: 101 EK--MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           +   M+ WKNAL +AA+LSGF S   R ES LIE+I   VL++L+  + ++      ++ 
Sbjct: 136 DHKMMQNWKNALFQAANLSGFHSTTYRTESDLIEDITRVVLRKLNHKYTNELTCNFILDE 195

Query: 159 SIEEIESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
           +   I+SL+  I S  V  + +WG+GGI K T+A A+F ++S  +EGS F  NV E  + 
Sbjct: 196 NYRTIQSLIKKIDSIEVQIIGLWGMGGIGKTTLAAALFQRVSFKYEGSCFLENVTEVSKR 255

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVTS--------- 261
            GI  +  KLLS+L ++    +IES        + RL R K  IV DDV +         
Sbjct: 256 HGINFICNKLLSKLLRED--LDIESAKVIPSMIMRRLKRMKSFIVLDDVHTLELLQNLIG 313

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS VI+TTRDK VL +   +K +++KE+   ++ +LF   AF        ++
Sbjct: 314 VGNGWLGDGSIVIVTTRDKHVLVSGGIDKIHQVKEMNSRNSLQLFSFNAFDKVLPKEGYV 373

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+++ I YA+G PLALKVLG +LC +S+  W  A+ KL+ IP+ EI+++++ SY+ LDD
Sbjct: 374 ELSERVIDYAKGNPLALKVLGSFLCSKSEIEWNCALAKLKEIPNAEIDKIMRWSYNELDD 433

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            +KN+FLDIACF +G  RD + +I +               K+LI +D    I+MHDL++
Sbjct: 434 KEKNIFLDIACFFKGHERDRMTTILNQCGFFADIGIRTLLDKALIRVDFENCIQMHDLIQ 493

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG+++VR+ES+ +P + +RLW  K++Y VLK N  T+ +E I LD  + +R I+++   
Sbjct: 494 EMGKQVVREESLKNPEQSSRLWDPKEVYDVLKNNRETKIVEAIFLDATE-SRHINLSPKT 552

Query: 481 FSKMPKLRFLRFY---GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           F KMP LR L F    G K+  + S L+ +P   +R+  W   P K+L    C E LV  
Sbjct: 553 FEKMPNLRLLAFRDHKGIKSVSLPSGLDSLP-KNLRYFLWDGYPSKSLPPTFCPEMLVEF 611

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
            +  + VE LW+    LP+           EI+D    ++L                  E
Sbjct: 612 SLQDSHVENLWNGELNLPN----------LEILDLSNSKKL-----------------IE 644

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL-- 653
            P   G L+ +K + L+   +L  +  SI  L KL  L I  C  L+++    C+  L  
Sbjct: 645 CPNVSGSLN-LKYVRLNGCLSLPEVDSSIFFLQKLESLIIDGCISLKSISSNTCSPALRE 703

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           L+A NC +L++     SS+ + L+++L  F
Sbjct: 704 LNAMNCINLQEFSVTFSSVDN-LFLSLPEF 732


>gi|356495059|ref|XP_003516398.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1131

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 297/913 (32%), Positives = 452/913 (49%), Gaps = 167/913 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF++FRGED R +F  +L      K I  F+DD+L +GD I  SL+G I+ S I++ I
Sbjct: 18  YDVFVNFRGEDIRHSFLGYLTEAFYQKQINAFVDDKLEKGDEIWPSLVGAIQGSSISLTI 77

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE Y SSRW                      FY V+P+ VR Q  S+G   ++L K++ 
Sbjct: 78  FSENYTSSRWCLDELVKILECREKYGQIVIPVFYGVNPTDVRHQKGSYGEALAQLGKKYN 137

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEI---ANDVLKRLDATFQSKNKGLVGV 156
              ++ W+NAL + ADLSG  S   + E +L+ EI    N VL  LD  F  ++  L+G+
Sbjct: 138 LTTVQNWRNALKKVADLSGIKSFDYKTEVELLGEIINIVNLVLTSLDK-FDPESSRLIGI 196

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+ +ESLL   S+ V  + IWG+GGI K TIA  +F+K+   ++G YF  NV+E   
Sbjct: 197 DKQIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEIFSKLRSEYDGYYFLANVKEESS 256

Query: 217 TGGIKDLQKKLLSE-LSKDGNMRNIESQLNRLARK----KVRIVFDDVTS---------- 261
             G   L++KL S  L +D  M ++    N + RK    KV IV DDV            
Sbjct: 257 RQGTIYLKRKLFSAILGEDVEMDHMPRLSNYIKRKIGRMKVLIVLDDVNDSNLPEKLFEN 316

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTRDKQVL     +  Y++  L  ++A +LF  +AF  +H D  + +L
Sbjct: 317 HDWFGRGSRIIITTRDKQVLIANKVDDIYQVGALNNSEALELFSLYAFNQNHFDMEYYKL 376

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           ++  + YA+G+PL LKVLG  LCG+ KEVWES + KLE +P+ +I   +++S+D LD  +
Sbjct: 377 SEMVVNYAKGIPLVLKVLGRLLCGKDKEVWESQLHKLENMPNTDIYHAMRLSFDDLDRKE 436

Query: 376 KNVFLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDL 418
           + + LD+ACF  G               E  D V++  +    K+L+ +     I MHD+
Sbjct: 437 QKILLDLACFFIGLNLKLDSIKVLLKDNERDDSVVAGLERLKDKALVTISEDNVISMHDI 496

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +++M  EIVR+ESI  PG R+RL    D+Y+VLK N GTEAI  I  ++  + + + ++ 
Sbjct: 497 IQEMAWEIVRQESIEDPGNRSRLIDPNDVYEVLKYNKGTEAIRSIRANLPAI-QNLQLSP 555

Query: 479 YAFSKMPKLRFLRFYG--DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           + F+KM KL+F+ F    D    +   L+  P AE+R+L W   PL +L  N  AE LV 
Sbjct: 556 HVFNKMSKLQFVYFRKNFDVFPLLPRGLQSFP-AELRYLSWSHYPLISLPENFSAENLVI 614

Query: 535 LKMPCTKVEQLWDDVQRLPS-----------------------------SLCTFKTPITF 565
             +  + V +LWD VQ L +                             S C+    +  
Sbjct: 615 FDLSGSLVLKLWDGVQNLMNLKVLTVAGCLNLKELPDLSKATNLEFLEISSCSQLLSMNP 674

Query: 566 EIIDCKMLERLP------------DELENLEYLTVKG---------------------TT 592
            I+  K LERL             + L +L+YL ++G                     T+
Sbjct: 675 SILSLKKLERLSAHHCSLNTLISDNHLTSLKYLNLRGCKALSQFSVTSENMIELDLSFTS 734

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT--LPELPCN 650
           +   P + GR S +K L L  N N+E +P S R+L++L +L +    +L T  L ELP +
Sbjct: 735 VSAFPSTFGRQSNLKILSLVFN-NIESLPSSFRNLTRLRYLSVESSRKLHTLSLTELPAS 793

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVN-----LCNFLKLDPNELSEI--------VKD 697
           L +L A +C SL+ +     S++     N       N L+LD + L  I        +K 
Sbjct: 794 LEVLDATDCKSLKTV--YFPSIAEQFKENRREILFWNCLELDEHSLKAIGFNARINVMKS 851

Query: 698 GWMKHSLYEERGI----------KKSMYFPGNEIPKWFRHQSMGSSAT--LKTRPPRPAG 745
            +   S   E+ +          +    +PG+ IP+W  +++        L + P     
Sbjct: 852 AYHNLSATGEKNVDFYLRYSRSYQVKYVYPGSSIPEWLEYKTTKDYLIIDLSSTP----- 906

Query: 746 YNKLISFAFCAVV 758
           ++ L+ F F  V+
Sbjct: 907 HSTLLGFVFSFVI 919


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 292/886 (32%), Positives = 446/886 (50%), Gaps = 166/886 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R +F SH+   LS K I  F D +L  GD +S ++   IE S I+++I
Sbjct: 57  YDVFVSFRGSDIRKHFLSHVLEALSRKRIVVFSDKKLKTGDELS-AIQRAIEKSFISLVI 115

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  +ASS W                      FY+V+P+ VR Q+  +   F++  + + 
Sbjct: 116 FSPNFASSYWCMEELVKIVECREKYGRILMPVFYQVEPTVVRYQNGIYRDAFAQHEQNYS 175

Query: 101 E-KMKRWKNALTEAADLSGFDSN--------VIRPESKLIEEIANDVLKRLDATFQSKNK 151
             K+ RW++AL ++A++SGFDS+          R ++KL+EEI   VL +L+   Q K+K
Sbjct: 176 SYKVLRWRSALKQSANISGFDSSQFSCCPQLATRDDAKLVEEILQSVLMKLNQVDQGKSK 235

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           GL+G+E  I  IES+L + SE V  L IWG+ GI K TIA  VF ++   +E   F  NV
Sbjct: 236 GLIGIEKQISPIESMLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYETCCFMANV 295

Query: 212 REAEETGGIKD--LQKKLLSELSKDGNMRNIESQLN--------RLARKKVRIVFDDVTS 261
           RE  E  G     L+KKLLS L +D ++++    +N        RL+R KV IV DDV  
Sbjct: 296 REESERYGTNSLRLRKKLLSTLLEDEDLKD--DMINGLPPLVKKRLSRMKVLIVLDDVKD 353

Query: 262 ----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                           GSR+IIT RDKQVL     +  Y ++ L  A++ +LF   AF  
Sbjct: 354 AEQLEVLVGTVDWLGPGSRIIITARDKQVLSG-KVDDIYEVEPLDSAESFQLFNLHAFNK 412

Query: 306 D-HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
             HL+  + +L+ K + Y  GVPL LK L   L G+ K +WES  R L+I     + +V 
Sbjct: 413 QKHLEMEYYKLSKKMVDYTAGVPLVLKALANLLRGKDKAIWESQSRNLKIEQIENVHDVF 472

Query: 365 KISYDSLDDSQKNVFLDIACFLEG----------EHRDEVISIFD-----ASKSLINLDL 409
           ++ Y +LD  +K +FLDIACF +G            +D   S+         K+L+ +  
Sbjct: 473 RLIYTNLDYYEKIIFLDIACFFDGLKLKLELINLLLKDRYYSVSTRLERLKDKALVTISQ 532

Query: 410 FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK 469
              + MHD++++  REIVR+ES+  PG R+RL    DIY VLK + G+EAI  +++ +++
Sbjct: 533 QSIVSMHDIIQETAREIVRQESVEEPGNRSRLLDPDDIYHVLKDDKGSEAIRSMAIRLSE 592

Query: 470 VNREIHMNSYAFSKMPKLRFLRFY--GDKNKCMVS---HLEGVPFAEVRHLEWPQCPLKT 524
           + +E+ ++  AF+KM KL+FL  Y  G +N+  +S    LE +P  E+R+L W   PL+ 
Sbjct: 593 I-KELELSPQAFAKMSKLKFLDIYTKGSQNEGSLSLPQGLESLP-NELRYLRWEYYPLEF 650

Query: 525 L--NICAEKLVSLKMPCTKVEQLWDDVQ-------------RLPSSLCTFKTPITFEIID 569
           L     AE LV L +P +++++LW   +              L + L  F       ++D
Sbjct: 651 LPSKFSAENLVILNLPYSRLKKLWHGAKDIVNLNVLILSSSALLTELPDFSKATNLAVLD 710

Query: 570 CKMLERLPD------ELENLEYLTVKG--------------------------------- 590
            +    L         L+NLE L + G                                 
Sbjct: 711 LQSCVGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQSNTHLSSLSYLSLYNCTALKEFSVT 770

Query: 591 -----------TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                      T+I+ELP S+G  + +++L L  ++++E +P+SI++L++L  L + HC 
Sbjct: 771 SENINELDLELTSIKELPSSIGLQTKLEKLYL-GHTHIESLPKSIKNLTRLRHLDLHHCS 829

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL-----YVNLCNFLKLDPNELSEI 694
            LQTLPELP +L  L A  C SLE + A  S+ S  L      V   N LKL+   L  I
Sbjct: 830 ELQTLPELPPSLETLDADGCVSLENV-AFRSTASEQLKEKKKKVTFWNCLKLNEPSLKAI 888

Query: 695 VKDGWMKHSLYEERGI----------KKSMY-FPGNEIPKWFRHQS 729
             +  +    +  + I           + MY +PG++IP+W  + +
Sbjct: 889 ELNAQINMMNFSHKHITWDRDRDHDHNQGMYVYPGSKIPEWLEYST 934


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 285/773 (36%), Positives = 416/773 (53%), Gaps = 110/773 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR  FT HLH  L  K I TF+D+QL+RGD IS SLL TIE + +++I+
Sbjct: 41  YDVFLSFRGEDTRVGFTGHLHAALKRKQILTFVDNQLVRGDEISASLLRTIEEAKLSVIV 100

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS+W                      FY+VDPS+VR Q+ SFG  F+RL K+  
Sbjct: 101 FSENYASSKWCLEELAKIFERRRNNGHIVIPVFYQVDPSNVRNQAGSFGDAFARLIKKKA 160

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGV 156
              +K K + +AL +AA+LSG+      PES+ IE+I  DVLK+L A   S    GL G+
Sbjct: 161 LTMDKEKSFTDALKDAANLSGWTLRESHPESQFIEKIVGDVLKKLHAMSSSHTMAGLFGI 220

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  + E+ESLL + S  V  + IWG+GGI K TIA  V +K+   FE  +FA N R+   
Sbjct: 221 DVRVSEVESLLDMESLDVLIVGIWGMGGIGKTTIAEVVCSKVRSRFERIFFA-NFRQQ-- 277

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIES-------QLNRLARKKVRIVFDDVTS-------- 261
                DL++  LS L     +  + S         +RL R +  IV D+V +        
Sbjct: 278 ----SDLRRSFLSWLLGQETLDTMGSLSFRDSFVRDRLRRIRGLIVLDNVDNLMHLEEWR 333

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GS+V+IT+RDKQVL N   ++ Y+++ L    A +LF   A       
Sbjct: 334 DLLDERNSSFGPGSKVLITSRDKQVLSNV-VDETYKVQGLTDEQAIQLFSSKALKNCIPT 392

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
           + H  L ++  ++ QG PLALKVLG  L G+S E W SA+ KL    H +IE  L+ISYD
Sbjct: 393 SDHRHLIEQIGRHVQGNPLALKVLGSSLYGKSIEEWRSALNKLA--QHPQIERALRISYD 450

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFY------------------ 411
            LD  QK++FLDIA FL         S ++ S+++  LD+FY                  
Sbjct: 451 GLDSEQKSIFLDIAHFLTR-------SRWEKSRAIRILDVFYGRSVIFDINTLIDKCLIN 503

Query: 412 ----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM 467
                + MHDLLR+M   IVR ES + PG+R+RL H +D+ QVL++N GT+ I+GIS+D 
Sbjct: 504 TSPSSLEMHDLLREMAFNIVRAES-DFPGERSRLCHPRDVVQVLEENKGTQQIKGISVD- 561

Query: 468 NKVNREIHMNSYAFSKMPKLRFLRF--YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
             ++R IH+ S AF+ M  LRFL F    DK     + LE +P  ++R+L+W   P K+L
Sbjct: 562 -GLSRHIHLKSDAFAMMDGLRFLDFDHVVDKMHLPPTGLEYLP-NKLRYLQWNGFPSKSL 619

Query: 526 --NICAEKLVSLKMPCTKVEQLWDDVQRLPS--SLCTFKTPITFEIIDCKMLERLPDELE 581
             + CAE LV L +  +K+ +LW  V+ + +   +    +P   E+ D  M + L     
Sbjct: 620 PPSFCAEHLVELDLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNL----- 674

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            +  + V   ++ E+P SL  L  ++++ L    NL   P  + +   L +L I+ C  +
Sbjct: 675 -VSLILVDCPSLTEVPSSLQYLDKLEKIDLYRCYNLRSFP--MLYSKVLRYLEINRCLDV 731

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            T P +  N+ LL     TS++++P  ++S   +L ++ C+ +   P  L +I
Sbjct: 732 TTCPTISQNMELLILEQ-TSIKEVPQSVASKLELLDLSGCSKMTKFPENLEDI 783



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 60/229 (26%)

Query: 512 VRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID-- 569
           +R+LE  +C    L++     +S  M    +EQ    ++ +P S+ +       E++D  
Sbjct: 720 LRYLEINRC----LDVTTCPTISQNMELLILEQ--TSIKEVPQSVAS-----KLELLDLS 768

Query: 570 -CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE------ 622
            C  + + P+ LE++E L + GT I+E+P S+  L+ +  L ++  S LE   E      
Sbjct: 769 GCSKMTKFPENLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMK 828

Query: 623 ------------------SIRHLSKLTFLFISHC----------------------ERLQ 642
                             S +H+  LTFL++                           ++
Sbjct: 829 SLQHLNLSKSGIKEIPLISFKHMISLTFLYLDGTPIKELPLSIKDMVCLQHLSLTGTPIK 888

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL 691
            LPELP +L  ++  +C SLE + + ++  S    ++  N  KLD   L
Sbjct: 889 ALPELPPSLRKITTHDCASLETVTSIINISSLWHGLDFTNCFKLDQKPL 937


>gi|356558721|ref|XP_003547651.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1054

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 305/967 (31%), Positives = 471/967 (48%), Gaps = 173/967 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R  F SHL    S K I  F+D  +++GD +S++LLG I  S I++II
Sbjct: 44  YDVFVSFRGADIRQGFLSHLIEAFSRKHIAAFVDHNILKGDELSETLLGAINGSLISLII 103

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASSRW                      FY+VDPS VR Q  ++G  F++   +F 
Sbjct: 104 FSQNYASSRWCLLELVKIVECRKRDGQIVVPVFYKVDPSDVRHQKGTYGDAFAKHEGKFS 163

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
              ++ W++AL E+A+LSGF S+    E++L++EI   V  RL+   Q  +KGLVGV   
Sbjct: 164 LTTIQTWRSALNESANLSGFHSSTFGDEAELVKEIVKCVWMRLNHAHQVNSKGLVGVGKR 223

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I  +ESLL + +  V  + IWGIGGI K TIA  V+NK+   +EG  F  N+RE     G
Sbjct: 224 IVHVESLLQLEAADVRIIGIWGIGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHG 283

Query: 220 IKDLQKKLLSEL---------SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
           I  L+K L S L         + +G  + +E    RL R KV I+ DDV           
Sbjct: 284 IISLKKNLFSTLLGEEYLKIDTPNGLPQYVE---RRLHRMKVLIILDDVNDSEQLETLAR 340

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TTRD+QVL N +AN  Y ++ L + ++  LF    F   H +  + EL
Sbjct: 341 TDWFGPGSRIIVTTRDRQVLANEFAN-IYEVEPLNFDESLWLFNLNVFKQKHPEIEYYEL 399

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + K + YA+G+P  LK+LG  L G+ KE+WES +   + +   ++ +++K+SY+ LD  +
Sbjct: 400 SKKVVDYAKGIPFVLKLLGHRLHGKEKEIWESQLEG-QNVQTKKVHDIIKLSYNDLDQDE 458

Query: 376 KNVFLDIACFLEG-------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDLLR 420
           K + +DIACF  G             +H   V S  +    K+LI++     + MHD+++
Sbjct: 459 KKILMDIACFFYGLRLEVKRIKLLLKDHDYSVASGLERLKDKALISISKENMVSMHDIIK 518

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +   +I  +ESI  P  + RL+   D+YQVLK N G EAI  I +++ ++ +++ +N   
Sbjct: 519 ETAWQIAPQESIEDPRSQIRLFDPDDVYQVLKYNKGNEAIRSIVVNLLRM-KQLRLNPQV 577

Query: 481 FSKMPKLRFLRFYG---------DKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NIC 528
           F+KM KL FL FY          D     +S  LE +P  E+R+L W   PL++L     
Sbjct: 578 FTKMNKLHFLNFYSVWSSSTFLQDPWGLYLSQGLESLP-NELRYLRWTHYPLESLPSKFS 636

Query: 529 AEKLVSLKMPCTKVEQLW-----------------DDVQRLPS------------SLCTF 559
           AE LV L +P ++V++LW                   V+ LP               C  
Sbjct: 637 AENLVELHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVG 696

Query: 560 KTPITFEIIDCKMLERLP-------------DELENLEYLTVKG---------------- 590
            T +   +   K LE+L                +++L YL++ G                
Sbjct: 697 LTRVHPSVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVISKNLVK 756

Query: 591 -----TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                T+I++LP S+G  S +K L L+  + +E +P SI+HL++L  L + +C  L+TLP
Sbjct: 757 LNLELTSIKQLPLSIGSQSMLKMLRLA-YTYIETLPTSIKHLTRLRHLDLRYCAGLRTLP 815

Query: 646 ELPCNLGLLSARNCTSLEKLP-AGLSSMSSVLYVNLC--NFLKLDPNELSEIVKDGWMK- 701
           ELP +L  L  R C SLE +    +          +C  N L+LD   L  I  +  +  
Sbjct: 816 ELPPSLETLDVRECVSLETVMFPSIPQQRKENKKKVCFWNCLQLDEYSLMAIEMNAQINM 875

Query: 702 -----HSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTRPPRPAGYNKLISFAFC 755
                  L   R  + +  +PG+++P+W  H++  G      T  P  +    +  F   
Sbjct: 876 VKFAHQHLSTFRDAQGTYVYPGSDVPQWLDHKTRHGYDDDYVTIAPHSSHLGFIFGFIVP 935

Query: 756 AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFL-- 813
            V    + LK  +  +G +  +GN  ++    +R   G            ++S+HV+L  
Sbjct: 936 EVPYGGSNLK-LKITTGAEGEEGN--SIIVYLERPHHG------------IKSNHVYLMY 980

Query: 814 --GCNSF 818
              C+ F
Sbjct: 981 DQACSHF 987


>gi|358345567|ref|XP_003636848.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502783|gb|AES83986.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1237

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 268/742 (36%), Positives = 391/742 (52%), Gaps = 100/742 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+DTR  FTSHLH  L   +  T+ID ++ +GD +   L   I  S + +++
Sbjct: 19  YDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGELQKAINESTLFLVV 78

Query: 62  FSERYASSRW------------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           FSE YA S W                         FY VDPSHVRKQ+ S+G   + L K
Sbjct: 79  FSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQTGSYG---TALAK 135

Query: 98  RFPEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               KM + WKNAL EA++LSGF S   R ES LIE+I   VL +L+  +  +      +
Sbjct: 136 HIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRYAIELTYSFIL 195

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           + +   I+SL+ I S  V  + +WG+GG  K T+A A+F ++S H+EG  F  NV E  E
Sbjct: 196 DENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSE 255

Query: 217 TGGIKDLQKKLLSELSKDG----NMRNIESQLNR-LARKKVRIVFDDV------------ 259
             GI D   KLLS+L  +      ++ I S + R L R K  IV DDV            
Sbjct: 256 KHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGV 315

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GS VI+TTRDK VL +    + Y +K++   ++ +LFC  AF         +E
Sbjct: 316 GHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVE 375

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ +AI YA+G+PLALKVLG  L  +S+  W  A+ KLE I + EI+ +L+ SY+ LDD 
Sbjct: 376 LSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELDDK 435

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           +KN+FLDIACF +G  R+ V  I +               K+LI +D    I+MHDL+++
Sbjct: 436 EKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQE 495

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IVR+ES+ +PG+R+RL   K+++ VLK N G+E IE I LD  +    I++N  AF
Sbjct: 496 MGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTH-INLNPKAF 554

Query: 482 SKMPKLRFLRFY---GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            KM  LR L F    G K+  +   L+ +P   +R+  W   P K+L    CAE LV L 
Sbjct: 555 EKMVNLRLLAFRDHKGVKSVSLPHGLDSLP-ETLRYFLWDGYPWKSLPPTFCAEMLVELS 613

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           M  + VE+LW+ V  +P +L       + ++I+C  +   P    NL+Y+T++      +
Sbjct: 614 MQESHVEKLWNGVLDMP-NLEVLDLGRSRKLIECPNVSGSP----NLKYVTLEDC--ESM 666

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--L 654
           PE                     +  SI  L KL  L +  C  L++L    C+     L
Sbjct: 667 PE---------------------VDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFREL 705

Query: 655 SARNCTSLEKLPAGLSSMSSVL 676
           +A  C +L+ +    +S+  ++
Sbjct: 706 NAMFCDNLKDISVTFASVDGLV 727



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 100/245 (40%), Gaps = 52/245 (21%)

Query: 546 WDDVQRLPSSLCTFK--TPITFEIIDC--KMLERLPDELENLEYLTVKGTTIRELPESLG 601
           WD    LPSS+   K  T + F I DC   + E   DE+  +   + +      L + L 
Sbjct: 733 WDG-NELPSSILHKKNLTRLVFPISDCLVDLPENFSDEIWLMSQRSCEHDPFITLHKVLP 791

Query: 602 RLSW--VKRLILSNNSNLERIP-----------------------ESIRHLSKLTFLFIS 636
             ++  VKRLI S+   L  IP                       E+IR+L +L  L + 
Sbjct: 792 SPAFQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKRLDVL 851

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL-----KLDPNEL 691
           +C+ LQ++P L  ++      NC SLEK    + S+S       C FL     KLDP+  
Sbjct: 852 NCKMLQSIPPLSKHVCFFMLWNCESLEK----VLSLSEPAEKPRCGFLLLNCIKLDPHSY 907

Query: 692 SEIVKDGWMKHSLY-----EERGIKKSMY-----FPGNEIPKWFRHQSMGSSATLKTRPP 741
             ++ D   +  L      E   +  S +      PG E   WF + S   S TL+  P 
Sbjct: 908 QTVLNDAMERIELVAKVVSENAFVCDSAWHFLPAMPGME--NWFHYSSTQVSVTLEL-PS 964

Query: 742 RPAGY 746
             +G+
Sbjct: 965 NLSGF 969


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 277/760 (36%), Positives = 415/760 (54%), Gaps = 84/760 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R  F  HL+  L  K I TF DD+ L +G  IS  L+ +IE S IA+I
Sbjct: 18  YDVFLSFRGEDVRKTFVDHLYLALQQKCINTFKDDEKLEKGKFISPELVSSIEESRIALI 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+S W                      FY VDPS VRKQ   FG  FS+   RF
Sbjct: 78  IFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVRKQKSIFGEAFSKHEARF 137

Query: 100 PE-KMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVG 155
            E K+++W+ AL EAA++SG+D  +     E++++E+IA D++ RL +   + N + LVG
Sbjct: 138 QEDKVQKWRAALEEAANISGWDLPNTSNGHEARVMEKIAEDIMARLGSQRHASNARNLVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  + ++  +L IGS GV  L I G+ G+ K T+A  +++ I   F+G+ F   VR+  
Sbjct: 198 MESHMHQVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRS 257

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIES------QLNRLARKKVRIVFDDVT--------- 260
              G++ LQ+ LLSE+     +R  +S      Q  RL  KKV +V DDV          
Sbjct: 258 AKQGLERLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+DK +L      K YRMK L   ++ +LF Q AF  +       
Sbjct: 318 GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFE 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+ + IK+  G+PLALKVLG +L GR  + W S + +L+ IP  EI + L+ S+  L +
Sbjct: 378 DLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEILKKLEQSFTGLHN 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           +++ +FLDIACF  G+ +D V  I ++              K LI   L  RI +H L++
Sbjct: 438 TEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLIT-TLQGRITIHQLIQ 496

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMG  IVR+E+ + P   +RLW  +DI  VL++N GT+ IEG+SL +     E++    A
Sbjct: 497 DMGWHIVRREATDDPRMCSRLWKREDICPVLERNLGTDKIEGMSLHLTN-EEEVNFGGKA 555

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           F +M +LRFL+F   +N  +    E +P  E+R L+W   P K+L  +   ++LVSLK+ 
Sbjct: 556 FMQMTRLRFLKF---QNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGDQLVSLKLK 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            +++ QLW    +    L   K      +   + L R+PD     NLE L ++  T++ E
Sbjct: 612 KSRIIQLW----KTSKDLGKLK---YMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVE 664

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+  L  +  L L N  NL+ +P+ IR L KL  L ++ C +L+T PE+   +  L+
Sbjct: 665 INFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEKMNCLA 723

Query: 656 A--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
               + TSL +LPA + ++S V  +NL  C  L+  P+ +
Sbjct: 724 ELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSI 763



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 140/334 (41%), Gaps = 59/334 (17%)

Query: 473  EIHMNSYAFSKMP-KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
            E+++++ + S++P  +  L   G  N     HLE +P +  R     +C LKTL++    
Sbjct: 724  ELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRL----KC-LKTLDVSG-- 776

Query: 532  LVSLKMPCTKVEQLWDD----------------VQRLPSSLCTFKTPITFEIIDCKML-- 573
                   C+K++ L DD                +Q +PSS+   K      +  C  L  
Sbjct: 777  -------CSKLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSS 829

Query: 574  ---------ERLPDELENLE------YLTVKGTTIRE--LPESLGRLSWVKRLILSNNSN 616
                     + +    +NL        L +    I +  +  +LG L  ++RLIL  N N
Sbjct: 830  QVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGN-N 888

Query: 617  LERIPE-SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
               IP  SI  L++L  L +  C RL++LPELP ++  + A  CTSL  +   L+    +
Sbjct: 889  FSNIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKGIYANECTSLMSIDQ-LTKYPML 947

Query: 676  LYVNLCNFLKLDPNELSEIVKDGWMKHSLYE-ERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
               +  N  +L  N+    + D  +K  L      ++   Y PG EIP+WF ++S G+ +
Sbjct: 948  SDASFRNCRQLVKNKQHTSMVDSLLKQMLEALYMNVRFGFYVPGMEIPEWFTYKSWGTQS 1007

Query: 735  TLKTRP-----PRPAGYNKLISFAFCAVVVFPAF 763
                 P     P   G+   + F     +V   F
Sbjct: 1008 MSVALPTNWLTPTFRGFTVCVVFDKWMPLVLGPF 1041


>gi|255579570|ref|XP_002530627.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223529837|gb|EEF31770.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1116

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 260/667 (38%), Positives = 376/667 (56%), Gaps = 76/667 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR NFTSHL+  L  K I  F DD QL RG  ISQ L+  I AS I +I
Sbjct: 11  YDVFISFRGEDTRKNFTSHLYAALRQKGINAFKDDRQLERGKTISQELVKAIRASKILMI 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YA SRW                      FY V+P+ VRKQ+  FG+ F   + RF
Sbjct: 71  IFSRNYAFSRWCLEEAVEIAECAKGNGQMVVPVFYNVNPNEVRKQTGDFGKAFGEHQLRF 130

Query: 100 PEKM---KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL--DATFQSKNKGLV 154
              +   +RW+ ALT+   LSG+D    R ES+LIEEI  DVL +L   +         V
Sbjct: 131 RNNLLTVQRWRLALTQLGSLSGWDLQE-RTESELIEEIIKDVLGKLRKSSLMSGAAMDFV 189

Query: 155 GVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G+   + E+   L +G    V  + I G+GGI K TIA  V+ +++  FEGS F  NVRE
Sbjct: 190 GMNSRLVEMSMYLDMGRLNDVLFIGISGMGGIGKTTIARVVYEELASQFEGSSFLANVRE 249

Query: 214 AEETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVT------- 260
            +E  G+  LQ++LLSE+  DGN+   ++       +NR+ +K+V ++ DDV        
Sbjct: 250 VKEKHGLVPLQQQLLSEILMDGNIAIWDAHCGTSEIVNRMCKKRVLLILDDVNQLEQLKL 309

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGSR+IITTRD+ +LK    +K Y+++ L   ++  LFC  AF  D+    
Sbjct: 310 LAGRHDWFGSGSRIIITTRDEHLLKCHGVDKIYKVQGLSQDESIHLFCLRAFKSDYPADD 369

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           ++EL+++ + Y  G+PLAL VLG +L  +S   W SA+R+L+ IP+ EI E L IS+D L
Sbjct: 370 YVELSNEFVNYCNGLPLALDVLGSFLFDKSVNEWTSALRRLKQIPNQEILEKLFISFDGL 429

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLL 419
           ++ +K +FLDIACF  GE +D VI + ++         + LIN  L      RI MHDLL
Sbjct: 430 EEVEKKIFLDIACFFNGEDKDYVIKVLESRGFYPHVGIRDLINKSLITISKERIWMHDLL 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MGREIVR+ES   PGKR+RLW ++D+Y VL  +TGTE +E I LD  +   E  +++ 
Sbjct: 490 QEMGREIVRQESQEEPGKRSRLWLYEDVYHVLSNDTGTEQVEAIVLDSCEQEDE-ELSAK 548

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           AF+KM +LRFL+    +N  +   LE +   ++R+LEW + P K+        +L+ L M
Sbjct: 549 AFTKMKRLRFLKL---RNLHLSEGLEYLS-NKLRYLEWDRYPFKSFPSTFQPNELIELHM 604

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IREL 596
            C+ ++ +W  ++ L   L       +  +I     + +P    NLE L ++G T + E+
Sbjct: 605 RCSNIKHMWKGIKPL-KMLKVIDLSYSVNLIKTMDFKDVP----NLEELNLEGCTRLLEV 659

Query: 597 PESLGRL 603
            +S+G L
Sbjct: 660 HQSIGVL 666



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 106/288 (36%), Gaps = 73/288 (25%)

Query: 536 KMPCTKVEQLWDDV---QRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
           ++P TK   LWD +   Q+ P    T K P    +    +         NL Y  +   T
Sbjct: 675 QLPSTK---LWDFLLPWQKFPQRFLTQKNPNPMAMALPALFSLKSLRSLNLSYCNL---T 728

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
              LP  L     +K   LS N N   IP SI  LSKL     S+C+RLQ+ P LP ++ 
Sbjct: 729 DGALPSDLSCFPLLKTFNLSGN-NFVSIPSSISRLSKLEDFQFSNCKRLQSFPNLPSSIL 787

Query: 653 LLSARNCTSLEK-LPAGLSSMSSVLYV--NLCNFLKLDPNELSEIVK------------- 696
            LS   C++LE  LP   SS   +  +    C  L+L P+  S I+K             
Sbjct: 788 FLSMEGCSALETLLPKSNSSQFELFNICAEGCKRLQLLPDLSSSILKISVEGFSSKETSP 847

Query: 697 -----------------------------------DGWMKHSLYEERGIKKSMYFPGNEI 721
                                               G++ H L   R      + P  ++
Sbjct: 848 NLFVTHSSKPSMLTFINILKSVEVQSENIPLVARMSGYL-HYLLRHRHSSLGFFNPSTQV 906

Query: 722 ---------PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF 760
                    P WF +QS GSS  L+ + P     NK + F FC V  F
Sbjct: 907 SVCLAGSEIPGWFNYQSPGSS--LEMQLPPYWWTNKWMGFTFCIVFEF 952


>gi|358344433|ref|XP_003636294.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502229|gb|AES83432.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1198

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 268/742 (36%), Positives = 391/742 (52%), Gaps = 100/742 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+DTR  FTSHLH  L   +  T+ID ++ +GD +   L   I  S + +++
Sbjct: 19  YDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGELQKAINESTLFLVV 78

Query: 62  FSERYASSRW------------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           FSE YA S W                         FY VDPSHVRKQ+ S+G   + L K
Sbjct: 79  FSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQTGSYG---TALAK 135

Query: 98  RFPEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               KM + WKNAL EA++LSGF S   R ES LIE+I   VL +L+  +  +      +
Sbjct: 136 HIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRYAIELTYSFIL 195

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           + +   I+SL+ I S  V  + +WG+GG  K T+A A+F ++S H+EG  F  NV E  E
Sbjct: 196 DENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSE 255

Query: 217 TGGIKDLQKKLLSELSKDG----NMRNIESQLNR-LARKKVRIVFDDV------------ 259
             GI D   KLLS+L  +      ++ I S + R L R K  IV DDV            
Sbjct: 256 KHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGV 315

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GS VI+TTRDK VL +    + Y +K++   ++ +LFC  AF         +E
Sbjct: 316 GHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVE 375

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ +AI YA+G+PLALKVLG  L  +S+  W  A+ KLE I + EI+ +L+ SY+ LDD 
Sbjct: 376 LSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELDDK 435

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           +KN+FLDIACF +G  R+ V  I +               K+LI +D    I+MHDL+++
Sbjct: 436 EKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQE 495

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IVR+ES+ +PG+R+RL   K+++ VLK N G+E IE I LD  +    I++N  AF
Sbjct: 496 MGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTH-INLNPKAF 554

Query: 482 SKMPKLRFLRFY---GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            KM  LR L F    G K+  +   L+ +P   +R+  W   P K+L    CAE LV L 
Sbjct: 555 EKMVNLRLLAFRDHKGVKSVSLPHGLDSLP-ETLRYFLWDGYPWKSLPPTFCAEMLVELS 613

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           M  + VE+LW+ V  +P +L       + ++I+C  +   P    NL+Y+T++      +
Sbjct: 614 MQESHVEKLWNGVLDMP-NLEVLDLGRSRKLIECPNVSGSP----NLKYVTLEDC--ESM 666

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--L 654
           PE                     +  SI  L KL  L +  C  L++L    C+     L
Sbjct: 667 PE---------------------VDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFREL 705

Query: 655 SARNCTSLEKLPAGLSSMSSVL 676
           +A  C +L+ +    +S+  ++
Sbjct: 706 NAMFCDNLKDISVTFASVDGLV 727



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 100/245 (40%), Gaps = 52/245 (21%)

Query: 546 WDDVQRLPSSLCTFK--TPITFEIIDC--KMLERLPDELENLEYLTVKGTTIRELPESLG 601
           WD    LPSS+   K  T + F I DC   + E   DE+  +   + +      L + L 
Sbjct: 733 WDG-NELPSSILHKKNLTRLVFPISDCLVDLPENFSDEIWLMSQRSCEHDPFITLHKVLP 791

Query: 602 RLSW--VKRLILSNNSNLERIP-----------------------ESIRHLSKLTFLFIS 636
             ++  VKRLI S+   L  IP                       E+IR+L +L  L + 
Sbjct: 792 SPAFQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKRLDVL 851

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL-----KLDPNEL 691
           +C+ LQ++P L  ++      NC SLEK    + S+S       C FL     KLDP+  
Sbjct: 852 NCKMLQSIPPLSKHVCFFMLWNCESLEK----VLSLSEPAEKPRCGFLLLNCIKLDPHSY 907

Query: 692 SEIVKDGWMKHSLY-----EERGIKKSMY-----FPGNEIPKWFRHQSMGSSATLKTRPP 741
             ++ D   +  L      E   +  S +      PG E   WF + S   S TL+  P 
Sbjct: 908 QTVLNDAMERIELVAKVVSENAFVCDSAWHFLPAMPGME--NWFHYSSTQVSVTLEL-PS 964

Query: 742 RPAGY 746
             +G+
Sbjct: 965 NLSGF 969


>gi|357514797|ref|XP_003627687.1| NBS resistance protein [Medicago truncatula]
 gi|355521709|gb|AET02163.1| NBS resistance protein [Medicago truncatula]
          Length = 795

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 272/757 (35%), Positives = 396/757 (52%), Gaps = 104/757 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+DTR  FTSHLH  L   +  T+ID ++ +GD +   L   I  S + +++
Sbjct: 19  YDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGELQKAINESTLFLVV 78

Query: 62  FSERYASSRW------------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           FSE YA S W                         FY VDPSHVRKQ+ S+G   + L K
Sbjct: 79  FSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQTGSYG---TALAK 135

Query: 98  RFPEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               KM + WKNAL EA++LSGF S   R ES LIE+I   VL +L+  +  +      +
Sbjct: 136 HIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRYAIELTYSFIL 195

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           + +   I+SL+ I S  V  + +WG+GG  K T+A A+F ++S H+EG  F  NV E  E
Sbjct: 196 DENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSE 255

Query: 217 TGGIKDLQKKLLSELSKDG----NMRNIESQLNR-LARKKVRIVFDDV------------ 259
             GI D   KLLS+L  +      ++ I S + R L R K  IV DDV            
Sbjct: 256 KHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGV 315

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GS VI+TTRDK VL +    + Y +K++   ++ +LFC  AF         +E
Sbjct: 316 GHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVE 375

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ +AI YA+G+PLALKVLG  L  +S+  W  A+ KLE I + EI+ +L+ SY+ LDD 
Sbjct: 376 LSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELDDK 435

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           +KN+FLDIACF +G  R+ V  I +               K+LI +D    I+MHDL+++
Sbjct: 436 EKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQE 495

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IVR+ES+ +PG+R+RL   K+++ VLK N G+E IE I LD  +    I++N  AF
Sbjct: 496 MGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTH-INLNPKAF 554

Query: 482 SKMPKLRFLRFY---GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            KM  LR L F    G K+  +   L+ +P   +R+  W   P K+L    CAE LV L 
Sbjct: 555 EKMVNLRLLAFRDHKGVKSVSLPHGLDSLP-ETLRYFLWDGYPWKSLPPTFCAEMLVELS 613

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           M  + VE+LW+ V  +P +L       + ++I+C  +   P    NL+Y+T++      +
Sbjct: 614 MQESHVEKLWNGVLDMP-NLEVLDLGRSRKLIECPNVSGSP----NLKYVTLEDC--ESM 666

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--L 654
           PE                     +  SI  L KL  L +  C  L++L    C+     L
Sbjct: 667 PE---------------------VDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFREL 705

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL 691
           +A  C +L+ +    +S+  ++        + D NEL
Sbjct: 706 NAMFCDNLKDISVTFASVDGLVLF----LTEWDGNEL 738


>gi|4850296|emb|CAB43052.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
 gi|7267816|emb|CAB81218.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
          Length = 1174

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 297/913 (32%), Positives = 438/913 (47%), Gaps = 171/913 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED R+NF SHL      K I TF DD + R   I   L   I  S I++++
Sbjct: 11  YDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIRESKISVVL 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
           FSE YASS W                      FY+VDPS +RKQ+  FG  F      + 
Sbjct: 71  FSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCCGKT 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+   W+ ALT+AA++ G        E+  I  I+ DVL++L+AT       LVG+E  
Sbjct: 131 EERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKLNATPSRDFNDLVGMEAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I ++ESLLC+ S+GV  + IWG  G+ K TIA A++N+   +F  S F  NVRE+    G
Sbjct: 191 IAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESYGEAG 250

Query: 220 IKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
           + D      LQ++ LS+L   KD  +R++ +   RL  +KV I+ DDV            
Sbjct: 251 LDDYGLKLHLQQRFLSKLLDQKDLRVRHLGAIEERLKSQKVLIILDDVDNIEQLKALAKE 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG----GDHLDAS 311
                + SR+++TT++KQ+L +   N  Y++      +A  +FCQ AF      D L   
Sbjct: 311 NQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEALTIFCQHAFKQSSPSDDLKHL 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            IE T      A  +PLAL+VLG ++ G+ KE WE ++  L+     E+E+VLK+ YD L
Sbjct: 371 AIEFT----TLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKVLKVGYDGL 426

Query: 372 DDSQKNVFLDIACFLEGEH----RDEVISIFD----------ASKSLINLDLFYRIRMHD 417
            D +K++FL IAC   G+H    +  +I+  D          A KSLI      RI MH 
Sbjct: 427 HDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRIEMHS 486

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLR +G+E+VRK+SI  PGKR  L + K+   VL  NTGT  + GISLDM ++  E++++
Sbjct: 487 LLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEELYIS 546

Query: 478 SYAFSKMPKLRFLRFY-----GDKNKCMVS-HLEGVPF-AEVRHLEWPQCPLKTL--NIC 528
              F +M  L +L+FY      DK K  +    EG+ +  ++R L W   PL+    +  
Sbjct: 547 EKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLPQLRLLHWDAYPLEFFPSSFR 606

Query: 529 AEKLVSLKMPCTKVEQLWDDVQ-------------------------------------- 550
            E LV L M  +K+++LW  VQ                                      
Sbjct: 607 PECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCES 666

Query: 551 --RLPSSLCTFKTPITFEIIDCKMLERLPDELE-----------------------NLEY 585
              LPSS+   +  I  E+  CK LE +P  +                        N+  
Sbjct: 667 LVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQTFPEISTNIRL 726

Query: 586 LTVKGTTIRELPESLGRLS----------WVKRLI----------LSNNSNLERIPESIR 625
           L + GT I E+P S+   S           VKRL+          L  N  LE IP  ++
Sbjct: 727 LNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLCLRENKELETIPRYLK 786

Query: 626 HLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLK 685
           +L +L  + IS+C  + +LP+LP ++  L+A NC SL+ L     + S  +++N  N LK
Sbjct: 787 YLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQILHGHFRNKS--IHLNFINCLK 844

Query: 686 LDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
           L      +I +  ++  S Y       +   PG  +P +F ++S GSS  + +     + 
Sbjct: 845 LGQRAQEKIHRSVYIHQSSY------IADVLPGEHVPAYFSYRSTGSSIMIHSNKVDLSK 898

Query: 746 YNKLISFAFCAVV 758
           +N+   F  C V+
Sbjct: 899 FNR---FKVCLVL 908


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 271/751 (36%), Positives = 399/751 (53%), Gaps = 81/751 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFRGEDTR  FT HL   L  + I TF DDQL RG+ I   LL TIE S I++++
Sbjct: 20  FEVFLSFRGEDTRTIFTDHLFVNLGGRGINTFRDDQLERGEEIKSELLKTIEESRISVVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YA S+W                      FY VDPS VRKQ+ SFG  FS   +   
Sbjct: 80  FSRNYAHSKWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVD 139

Query: 101 EK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           EK ++RW+  LTEA++LSGF  N    ES  IEEI N++LKRL+      +  +VG++  
Sbjct: 140 EKKVQRWRVFLTEASNLSGFHVND-GYESMHIEEITNEILKRLNPKLLHIDDDIVGIDFR 198

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +++++ LL      V  + I+G GGI K TIA  V+N+I   F G+ F  +V+E  + G 
Sbjct: 199 LKKLKLLLSGHLNDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNGC 258

Query: 220 IKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVT-------------- 260
             +LQK+LL   L KD    +I   +N    RL  KK+ IV DDV               
Sbjct: 259 QLELQKQLLRGILGKDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPKW 318

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITTRD+ +L     N  YR+ EL Y +A +LF ++AF  +     +++ ++ 
Sbjct: 319 FGPGSRIIITTRDQHLLGEYGVNIPYRVTELHYKEALQLFSRYAFKQNVPKEDYVDFSNC 378

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YAQG+PLALKVLG  L G + + W SA+ +L+  P  EI +VL+IS+D LD+ +K+V
Sbjct: 379 MVDYAQGLPLALKVLGSSLHGMTIDEWRSALDRLKKNPVKEINDVLRISFDGLDNLEKDV 438

Query: 379 FLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACF + E +D V  I D               K LI +     I+MHDL+R MG  
Sbjct: 439 FLDIACFFKKECKDFVSRILDGCNLFATHGITILHDKCLITISDNI-IQMHDLIRQMGWA 497

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR E    P K +RLW   DIY    +  G E I+ ISLDM+  ++E+   +  F+KM 
Sbjct: 498 IVRDEYPGDPSKWSRLWDVDDIYDAFSRQEGMENIQTISLDMS-TSKEMQFTTEVFAKMN 556

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFA-------EVRHLEWPQCPLKTL--NICAEKLVSLK 536
           KLR L+ Y + +  +      V          ++R+L W  C L++L      E LV + 
Sbjct: 557 KLRLLKVYCNDHDGLTREEYKVFLPKDIEFPHKLRYLHWQGCTLRSLPSKFYGENLVEIN 616

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG-TTI 593
           +  + ++QLW   + L             ++ D K L ++P    + NLE L ++G  ++
Sbjct: 617 LKSSNIKQLWKGDKFLGKL-------KVIDLSDSKQLVKMPKFSSMPNLERLNLEGCISL 669

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
           REL  S+G L  +  L L     L+  P  ++    L  L++  C+ L+  P++  N+G 
Sbjct: 670 RELHLSIGDLKRLTYLNLGGCEQLQSFPPGMK-FESLEVLYLDRCQNLKKFPKIHGNMGH 728

Query: 654 LSA--RNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L     N + +++LP+ +  ++S+  +NL N
Sbjct: 729 LKELYLNKSEIKELPSSIVYLASLEVLNLSN 759



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 75/360 (20%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTIRE--LPESL 600
            +++  LP+S+ +     T  + +C  L  LPD L +L+    +L + G  + E  +P  L
Sbjct: 1089 ENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDL 1148

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
              LS +  L +S N ++  IP  I  LSKL  LF++HC  L+ + E+P +L ++ A  C 
Sbjct: 1149 WCLSLLVSLDVSEN-HIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCP 1207

Query: 661  SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG-N 719
            SLE       + SS+L+ +L    K  P +      + ++    Y +R    S+  PG N
Sbjct: 1208 SLET-----ETFSSLLWSSLLKRFK-SPIQPEFFEPNFFLDLDFYPQRF---SILLPGSN 1258

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGN 779
             IP+W  HQ MG   +++     P  + +  +F          F+ +F H   +DD    
Sbjct: 1259 GIPEWVSHQRMGCEVSIEL----PMNWYEDDNFL--------GFVLFFHHVPLDDDE--- 1303

Query: 780  VYAVCCDWKRKSEGHL--------YSWFLGKISYVESDHVFLGCNSFGGEY--------- 822
                 C+    S  H          S  L +IS+      +L  +   G++         
Sbjct: 1304 -----CETTEGSIPHCELTISHGDQSERLEEISFYFKCKTYLASHLLSGKHCYDSDSTPD 1358

Query: 823  ------FGPNYD---EFSFRIHCSF--HFPPYLERG----------EVKKCGIHFVYAQD 861
                  + P  D   E+  R   +F  HF   +  G          +VK CGIH +YAQD
Sbjct: 1359 PAIWVTYFPQIDIPSEYRSRRRNNFKXHFHTPIGVGSFKCGDNACFKVKSCGIHLLYAQD 1418



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 22/176 (12%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP+S+   ++     +  C   ++ P+    L+ L+ L ++ T I+ELP  +G L  
Sbjct: 904  IKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQA 963

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
            ++ L LS  SN ER PE    + KL  LF+        + ELPC++G L+        NC
Sbjct: 964  LESLALSGCSNFERFPEI--QMGKLWALFLDE----TPIKELPCSIGHLTRLKWLDLENC 1017

Query: 660  TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKD-GWMKHSLYEERGIKK 712
             +L  LP  +  + S+  L +N C+ L+      SEI +D   ++H    E GI +
Sbjct: 1018 RNLRSLPNSICGLKSLERLSLNGCSNLE----AFSEITEDMERLEHLFLRETGITE 1069



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENLEYLTVKGTTIRELPESLGRLSWVK 607
            ++ LP+ +   +   +  +  C   ER P+ ++  L  L +  T I+ELP S+G L+ +K
Sbjct: 951  IKELPNGIGCLQALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLK 1010

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG-----LLSARNCTSL 662
             L L N  NL  +P SI  L  L  L ++ C  L+   E+  ++       L     T L
Sbjct: 1011 WLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITEL 1070

Query: 663  EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
              L   L  + S+  +N  N + L PN +  + 
Sbjct: 1071 PSLIGHLRGLESLELINCENLVAL-PNSIGSLT 1102



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 90/172 (52%), Gaps = 10/172 (5%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTT-IRELPESLGRL 603
           +++ LPSS+    +     + +C  LE+ P+   N+++L    ++G +   +  ++   +
Sbjct: 738 EIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDTFTYM 797

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTS 661
             ++ L L   S ++ +P SI +L  L  L +S+C + +  PE+  N+  L     + T+
Sbjct: 798 EHLRGLHLG-ESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTA 856

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLY-EERGIKK 712
           +++LP  + S++S+  ++L   LK +  + S+I  +  +   LY  E GIK+
Sbjct: 857 IKELPNSMGSLTSLEILSLKECLKFE--KFSDIFTNMGLLRELYLRESGIKE 906



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 28/155 (18%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LPSS+   ++    ++  C   E+ P+    ++ L+ L +  T I+ELP S+G L+ 
Sbjct: 810 IKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTS 869

Query: 606 VKRL-------------ILSN----------NSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L             I +N           S ++ +P SI +L  L  L +S+C   Q
Sbjct: 870 LEILSLKECLKFEKFSDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQ 929

Query: 643 TLPELPCNLGLLS--ARNCTSLEKLPAGLSSMSSV 675
             PE+  NL  L       T++++LP G+  + ++
Sbjct: 930 KFPEIQGNLKCLKELCLENTAIKELPNGIGCLQAL 964


>gi|15237080|ref|NP_192855.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|75100697|sp|O82500.1|Y4117_ARATH RecName: Full=Putative disease resistance protein At4g11170
 gi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteins
           [Arabidopsis thaliana]
 gi|332657580|gb|AEE82980.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1095

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 297/913 (32%), Positives = 438/913 (47%), Gaps = 171/913 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED R+NF SHL      K I TF DD + R   I   L   I  S I++++
Sbjct: 11  YDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIRESKISVVL 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
           FSE YASS W                      FY+VDPS +RKQ+  FG  F      + 
Sbjct: 71  FSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCCGKT 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+   W+ ALT+AA++ G        E+  I  I+ DVL++L+AT       LVG+E  
Sbjct: 131 EERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKLNATPSRDFNDLVGMEAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I ++ESLLC+ S+GV  + IWG  G+ K TIA A++N+   +F  S F  NVRE+    G
Sbjct: 191 IAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESYGEAG 250

Query: 220 IKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
           + D      LQ++ LS+L   KD  +R++ +   RL  +KV I+ DDV            
Sbjct: 251 LDDYGLKLHLQQRFLSKLLDQKDLRVRHLGAIEERLKSQKVLIILDDVDNIEQLKALAKE 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG----GDHLDAS 311
                + SR+++TT++KQ+L +   N  Y++      +A  +FCQ AF      D L   
Sbjct: 311 NQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEALTIFCQHAFKQSSPSDDLKHL 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            IE T      A  +PLAL+VLG ++ G+ KE WE ++  L+     E+E+VLK+ YD L
Sbjct: 371 AIEFT----TLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKVLKVGYDGL 426

Query: 372 DDSQKNVFLDIACFLEGEH----RDEVISIFD----------ASKSLINLDLFYRIRMHD 417
            D +K++FL IAC   G+H    +  +I+  D          A KSLI      RI MH 
Sbjct: 427 HDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRIEMHS 486

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLR +G+E+VRK+SI  PGKR  L + K+   VL  NTGT  + GISLDM ++  E++++
Sbjct: 487 LLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEELYIS 546

Query: 478 SYAFSKMPKLRFLRFY-----GDKNKCMVS-HLEGVPF-AEVRHLEWPQCPLKTL--NIC 528
              F +M  L +L+FY      DK K  +    EG+ +  ++R L W   PL+    +  
Sbjct: 547 EKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLPQLRLLHWDAYPLEFFPSSFR 606

Query: 529 AEKLVSLKMPCTKVEQLWDDVQ-------------------------------------- 550
            E LV L M  +K+++LW  VQ                                      
Sbjct: 607 PECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCES 666

Query: 551 --RLPSSLCTFKTPITFEIIDCKMLERLPDELE-----------------------NLEY 585
              LPSS+   +  I  E+  CK LE +P  +                        N+  
Sbjct: 667 LVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQTFPEISTNIRL 726

Query: 586 LTVKGTTIRELPESLGRLS----------WVKRLI----------LSNNSNLERIPESIR 625
           L + GT I E+P S+   S           VKRL+          L  N  LE IP  ++
Sbjct: 727 LNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLCLRENKELETIPRYLK 786

Query: 626 HLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLK 685
           +L +L  + IS+C  + +LP+LP ++  L+A NC SL+ L     + S  +++N  N LK
Sbjct: 787 YLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQILHGHFRNKS--IHLNFINCLK 844

Query: 686 LDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
           L      +I +  ++  S Y       +   PG  +P +F ++S GSS  + +     + 
Sbjct: 845 LGQRAQEKIHRSVYIHQSSY------IADVLPGEHVPAYFSYRSTGSSIMIHSNKVDLSK 898

Query: 746 YNKLISFAFCAVV 758
           +N+   F  C V+
Sbjct: 899 FNR---FKVCLVL 908


>gi|147845097|emb|CAN78476.1| hypothetical protein VITISV_009816 [Vitis vinifera]
          Length = 826

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 279/797 (35%), Positives = 417/797 (52%), Gaps = 124/797 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFT HL+  L+ + I TF DD+ L RG  I  SLL  IE S ++I+
Sbjct: 13  WDVFLSFRGEDTRXNFTDHLYSALTSRGIHTFRDDEGLERGGEIQPSLLKAIEESKVSIV 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S+W                      FY VDPS VRKQ+ SFG+ F+R +K  
Sbjct: 73  VFSKNYAHSQWCLDELYKIMESRREKGQIVVPVFYHVDPSDVRKQTGSFGKAFARYKKVT 132

Query: 100 PEKMKRWKNALTEAADLSG------FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
            E++ RW+ ALT+A  LSG      ++S +I     ++  I+  ++ R      S N  L
Sbjct: 133 KERVLRWRAALTQAGGLSGWHVEHGYESQIIXV---IVGRISKMLISRPKLLCISAN--L 187

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG +  +EE+ SLLC+ S  V  + I GIGGI K T+A  ++N+I+  FEG+ F  N  E
Sbjct: 188 VGFDSRLEEMSSLLCMESNDVRMIGIHGIGGIGKTTLAIGIYNQIAHQFEGASFLPNAAE 247

Query: 214 AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT------- 260
            +E  G   LQ+KLL+++   K   + NI+  ++     L  +KV I+ DDV+       
Sbjct: 248 VKEHRGSLKLQRKLLADILGEKIARISNIDEGISLIKKTLCSRKVLIILDDVSALTQLEF 307

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGSR+IIT+R+K +L     +  Y +++L   +A KLF  +AF  D  D  
Sbjct: 308 LAGSRHWFGSGSRIIITSRNKHLLDVHEVDGLYEVQKLKSEEAFKLFSLYAFEADLXDDR 367

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             EL+ +A+ Y  G+PLA+KV+GCYL  +++  WE  + KL  +  + ++ VL++SYD L
Sbjct: 368 FWELSGRALNYCDGLPLAVKVVGCYLRXKTELEWEDELLKLTTVGQJTVQYVLRLSYDRL 427

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDASK-SLINLDLFY----------RIRMHDLLR 420
           + ++K++FLDIACF  G+  D V  I D+   S I + +            +I MH L++
Sbjct: 428 EHTEKDLFLDIACFFRGKDSDSVGRILDSCNFSAIGMKVLKDCSFISILDNKIEMHGLMQ 487

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG EI+R+ES   PG+R+RLW+ +D++ VL + TGT+AIEGIS D++  ++EI + S A
Sbjct: 488 QMGWEIIRRESPGQPGQRSRLWNPEDVHAVLTQKTGTKAIEGISFDVS-ASKEIQITSEA 546

Query: 481 FSKMPKLRFLRFYG------DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
             KM  LR LR Y       D N   +      P  E+R+L W    L++L  N   +KL
Sbjct: 547 LKKMTNLRLLRVYWDGLSSYDSNTVHLPEEFEFPSYELRYLHWDGWSLESLPSNFNGKKL 606

Query: 533 VSLKMPCTKVEQLWD-----------------------DVQRLPS--SL----CTF---- 559
           V L +  + +  LW                        DV   PS  +L    CT     
Sbjct: 607 VELSLKHSSLNHLWKGNKCLENLKVMDLSHSXYLVECPDVSGAPSLETLNLYGCTSLRED 666

Query: 560 -----------KTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
                      K      +  C  LE+ PD    +E+L  L ++GT I ELP S+G L  
Sbjct: 667 ASLFSQNHWIGKKLEVLNLSGCSRLEKFPDIKANMESLLELHLEGTAIIELPSSVGYLRG 726

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLE 663
           +  L + +  NL+ +P  I  L  L  L +S C +L+ LPE+   +  L     + TS+ 
Sbjct: 727 LVLLNMKSCKNLKILPGRICDLKSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSIR 786

Query: 664 KLPAGLSSMSSVLYVNL 680
           +LP  +  +  ++ +NL
Sbjct: 787 ELPRSILRLKGLVLLNL 803



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
           +++ LP  +C  K+  T  +  C  LERLP+    +E+LE L + GT+IRELP S+ RL 
Sbjct: 737 NLKILPGRICDLKSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSIRELPRSILRLK 796

Query: 605 WVKRLILSNNSNLERIPESI 624
            +  L L     L  +  SI
Sbjct: 797 GLVLLNLRKCKELRTLRNSI 816


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 275/796 (34%), Positives = 414/796 (52%), Gaps = 125/796 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSF GEDTR NFT HL+  L  +  +TF DD+L RG+ I   L   IE S  ++I+
Sbjct: 54  YDVFLSFGGEDTRYNFTDHLYQALLKRGNRTFRDDKLKRGEEIGSELFKVIERSRFSVIV 113

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA SRW                      FY VDPSHVRKQ+  FG  F   ++   
Sbjct: 114 FSENYADSRWCLNELVKIMECRKEMGQIVLSIFYHVDPSHVRKQTGGFGEAFKNYKEDTK 173

Query: 101 EK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           EK   ++RW++ALTEAA+LSG        ES+ I++I  D+  RL+  F   +K LVG++
Sbjct: 174 EKKEMVQRWRSALTEAANLSGEHVKDDGYESQYIKKITEDIFSRLNHGFIYVDKNLVGLD 233

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EE 216
             + E+ S LCI S  V  + I+G GGI K T+A  V N+I   +EG+ F  +VREA  +
Sbjct: 234 SHLNEMTSKLCIESNDVRMVGIYGCGGIGKTTLAKVVCNRIFHQYEGTIFLGSVREACAD 293

Query: 217 TGGIKDLQKKLLSEL-SKDGNMRNIE-------------------------SQLNRLARK 250
             G+ +LQK+LL  L  ++ N+ +++                         SQL  L   
Sbjct: 294 HRGLLNLQKQLLDILVGENHNVSSLDQGKLMIKNTFNCKRVLIILDDIDDLSQLESLVGS 353

Query: 251 KVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
           K     +    GSR+IITTR+K +LK    +  Y+MKEL   D+ +LF   AF  +H   
Sbjct: 354 K-----EWFGPGSRIIITTRNKHLLKLHHLDDSYQMKELDVEDSIELFSWSAFRQNHPKQ 408

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            +  L+   + YA+G+PLALK+LG  L  R+   WES + KL+ IP++EI  VL+IS+D 
Sbjct: 409 KYAYLSKCIVDYAKGLPLALKILGSLLYERTILEWESELHKLKRIPNMEILHVLRISFDG 468

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD--------ASKSLINLDLFYRIRMHDLLRDM 422
           LD  QK +FLDIACF +G+  D V  I D        + +SLI + L  +I MHDL++ M
Sbjct: 469 LDREQKEIFLDIACFFKGQDMDFVSRILDGYSGIRHLSDRSLITI-LNNKIHMHDLIQQM 527

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR++    P K +RLW  +DIY+   +  G E +E I +D++++ +EI  NS  ++
Sbjct: 528 GWEIVREKYPRDPNKWSRLWEPEDIYRAFIRKQGMENVEAIFMDLSRM-KEIQFNSQVWA 586

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGV--------PFAEVRHLEWPQCPLKTL--NICAEKL 532
           +M KLR L+   + ++  +     V        P  E+ +L W + PLK+L  N   E L
Sbjct: 587 EMMKLRLLQIICNDDEEFMKMESKVHFPEDFEFPSYELSYLLWERYPLKSLPSNFYGENL 646

Query: 533 VSLKMPCTKVEQLWD-----------------------------DVQRLPSSLC------ 557
           + + +  + + QLW                              +++RL   LC      
Sbjct: 647 IEINLKKSNIRQLWQGNKCLGKLKVLNLQGSTQLDHISNFSTMPNLERLNLRLCGSLDKI 706

Query: 558 ----TFKTPITF-EIIDCKMLERLPDE---LENLEYLTVKGTTIRE--LPESLGRLSWVK 607
                  T +T+ ++ +CK+L+ LP     L++LE L ++  +  E  L    G +  ++
Sbjct: 707 DSSIGVLTKLTWLDLSNCKLLKSLPSSIQYLDSLEELYLRNCSSLEKFLEMERGCMKGLR 766

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSLEK 664
            L L +N+ +E +  SI H++ L  L +  C+ L++LP   C L  L+    R+C++LE 
Sbjct: 767 ELWL-DNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLET 825

Query: 665 LPAGLSSMSSVLYVNL 680
            P  +  M  +  +NL
Sbjct: 826 FPEIMEDMQHLESLNL 841



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 132/318 (41%), Gaps = 89/318 (27%)

Query: 502  SHLEGVP--FAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLW-------DDVQRL 552
            S+LE  P    +++HLE       +LN+    +  +  P   + QL         +++ L
Sbjct: 821  SNLETFPEIMEDMQHLE-------SLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSL 873

Query: 553  PSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRL 609
            PS++C  ++  T ++  C  LE  P+   +++ L+ L ++GT I+ELP S+ R+  ++ L
Sbjct: 874  PSNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYL 933

Query: 610  ILSNNSNLERIPESIRHLS----------------------------------------- 628
             LSN  NLE +P +I  L                                          
Sbjct: 934  DLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDGME 993

Query: 629  -----------KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
                       KL  L ISHC+ LQ +PE P  L  + A +CT+LE L +  S + S   
Sbjct: 994  GAIFSDIGQFYKLRELNISHCKLLQEIPEFPSTLREIDAHDCTALETLFSPSSPLWS--- 1050

Query: 678  VNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSATL 736
                +FLKL        +K          + GI K +  PG+  IP+W  +Q MG+   +
Sbjct: 1051 ----SFLKL--------LKSATQDSECDTQTGISK-INIPGSSGIPRWVSYQKMGNHIRI 1097

Query: 737  KTRPPRPAGYNKLISFAF 754
            +  P      N    FAF
Sbjct: 1098 RL-PMNLYEDNNFFGFAF 1114



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 526 NICAEKLVSLKMPCTKVE----QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP---D 578
           N   E+L S  +  T +E    ++  +++ LPS++C  ++  T ++ DC  LE  P   +
Sbjct: 772 NTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLETFPEIME 831

Query: 579 ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           ++++LE L ++GT I+++      L+ +    L    NL  +P +I  L  LT L ++HC
Sbjct: 832 DMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHC 891

Query: 639 ERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCN 682
             L+T PE+  ++  L   +   T++++LP+ +  +  + Y++L N
Sbjct: 892 SNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSN 937


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 296/978 (30%), Positives = 476/978 (48%), Gaps = 181/978 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R+ F  HL    S K I  F+D +L +G+ ISQSL   IE S I+++I
Sbjct: 46  YDVFVSFRGPDIREVFLPHLIKAFSQKKIVYFVDYKLTKGNEISQSLFEAIETSSISLVI 105

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY+VDP+ VR Q+ ++   F    +++ 
Sbjct: 106 FSQNYASSSWCLDELVKVVDCREKDGNILLPVFYKVDPTIVRHQNGTYADAFVEHEQKYN 165

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
              ++RW++AL ++A+++GF ++    +++L+EEI   VLKRLD      +KGL+G+   
Sbjct: 166 WTVVQRWRSALKKSANINGFHTSKRLNDAELVEEIVKFVLKRLDHVHLVNSKGLIGIGKQ 225

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I  +ESLL + S+ V  + IWG+ GI K TIA  V++ +   + G YF  NVRE     G
Sbjct: 226 ISRVESLLQVESQDVRAIGIWGMSGIGKTTIAEEVYSMLCSEYSGCYFKANVREECRRHG 285

Query: 220 IKDLQKKLLS------ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------------ 261
           I  L+KKL S      +L  D   R       RL   KV +V DDV+             
Sbjct: 286 IIHLKKKLFSTLLGEQDLKIDTPHRLPYRDFVRLRTMKVLVVLDDVSDQEQLDILIGTLD 345

Query: 262 ----GSRVIITTRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDH-LDASHIEL 315
               GSR+IITT DKQVL K  +AN  Y ++ L + D+ +LF   AF  +      + EL
Sbjct: 346 WFGKGSRIIITTVDKQVLGKGVFANDIYEVRPLNFDDSLRLFNLNAFEQNQTYQIEYYEL 405

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + + +KYA+G+PL L++LG  L G+ K+ WE  + +++ +P  +  E++++SY+ L+  +
Sbjct: 406 SKRMVKYAKGIPLILEILGRKLRGKDKKEWEDQLERVKKVPIKKFHEIIRLSYNDLNRHE 465

Query: 376 KNVFLDIACFLEGEHRD-----------------EVISIFDASKSLINLDLFYRIRMHDL 418
           K +FLDIACF++G H +                 E+ S+   +K+LIN+     + MH +
Sbjct: 466 KRMFLDIACFIDGLHLNVDDIKLLAKDLGYPVGVELESL--KNKALINISPDNVVSMHTI 523

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +++   E VR+ESI+ P  ++RL  + D YQVLK N G+EAI  I+ D + + +++ +NS
Sbjct: 524 IQETAWEFVREESIDDPENQSRLVDY-DTYQVLKHNRGSEAIRSIATDFSII-KDLQLNS 581

Query: 479 YAFSKMPKLRFLRFYGD---------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NI 527
             F+KM KL++L  Y           ++  +   L+ +P  E+R+L W   PL++L    
Sbjct: 582 KVFAKMNKLQYLDIYTKGYYVFFQIPRSLNLPQGLKSLP-DELRYLRWAYYPLESLPSKF 640

Query: 528 CAEKLVSLKMPCTKVEQLW---DDVQRLPSSLCTFKTPI----------TFEIIDCKMLE 574
             EKLV L +  ++V++LW    DV  L   + +  + +             I+D +M  
Sbjct: 641 NGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNLAIVDLRMCG 700

Query: 575 RLPD-----------------------------ELENLEYLTVKG--------------- 590
           RL                                L +L YL++ G               
Sbjct: 701 RLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCIKLKEFSVTSKEMV 760

Query: 591 ------TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                 T I++L  S+G  + +++L+LS +S +E +P+SIR LS L  L + HC +LQ L
Sbjct: 761 LLNLEHTGIKQLSSSIGLQTKLEKLLLS-HSFIENLPKSIRRLSSLRHLELRHCRKLQRL 819

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSV----LYVNLCNFLKLDPNELSEIVKDGWM 700
           P+LP +L  L A  C SLE +     ++  +      V+  N +KL  + L  I  +  +
Sbjct: 820 PKLPSSLITLDATGCVSLENVTFPSRALQVLKENKTKVSFWNCVKLVEHSLKAIELNAQI 879

Query: 701 KHSLYEERGIKKS----------MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLI 750
               +  + I  S            +PG+ +PKW  +++  +   +       +  +  +
Sbjct: 880 NMMKFAHKQISTSSDHDYDAQGTYVYPGSSVPKWLVYRTTRNYMFIDLSFVNHS--SDQL 937

Query: 751 SFAFCAVVV---FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISY-V 806
           +F FC +V       F+  F    G +  +  VY                  L K S  +
Sbjct: 938 AFIFCFIVPQVESEGFILRFNISVGGEAENIQVY------------------LNKPSQEI 979

Query: 807 ESDHVFLGCNSFGGEYFG 824
           +SDHV+L C+     Y  
Sbjct: 980 KSDHVYLMCDQGLSRYLN 997


>gi|357513933|ref|XP_003627255.1| NBS resistance protein [Medicago truncatula]
 gi|355521277|gb|AET01731.1| NBS resistance protein [Medicago truncatula]
          Length = 1079

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 309/971 (31%), Positives = 473/971 (48%), Gaps = 185/971 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R NF SH+    S K I  F D +L  GD IS+ L   IE S I+++I
Sbjct: 41  YDVFVSFRGSDIRKNFLSHVLEAFSRKKIVVFSDKKLRGGDEISE-LHTAIEKSLISLVI 99

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  +ASS W                      FY+V+PS VR Q+ S+   F++  +++ 
Sbjct: 100 FSPNFASSHWCLDELVKIVECRANYGRILLPVFYQVEPSDVRHQNGSYRDAFAQHEQKYN 159

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K+  W+ AL ++A++SGFDS+    ++KL+EEI  +VL +L+   Q K+KGL+G+E  
Sbjct: 160 LNKVLSWRYALKQSANMSGFDSSHFPDDAKLVEEIVQNVLTKLNQVDQGKSKGLIGIEKQ 219

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE--- 216
           I  IESLL + SE V  L IWG+ GI K TIA  VF ++   +E  YF  NVRE  E   
Sbjct: 220 ILPIESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSKYESCYFMANVREESEGCR 279

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLN--------RLARKKVRIVFDDVTS------- 261
           T  ++ L+K LLS L ++ +++  +  +N        RL+R KV IV DDV         
Sbjct: 280 TNSLR-LRKNLLSTLLEEEDLK--DDMINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEVL 336

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG-DHLDAS 311
                    GSR+IITTRDKQVL     +  Y ++ L  A++ +LF   AF   +HL+  
Sbjct: 337 IGIVDWLGPGSRIIITTRDKQVLAGK-IDDIYEVEPLDSAESFQLFNLNAFTKHEHLEME 395

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + EL+ K + Y  GVPL LK L   L G+ K +WE+  R L+I     + +V ++ Y +L
Sbjct: 396 YYELSKKMVDYTAGVPLVLKALANLLRGKDKAIWETQSRNLKIEQIENVHDVFRLIYTNL 455

Query: 372 DDSQKNVFLDIACFLEG-------------EHRDEVISIFD--ASKSLINLDLFYRIRMH 416
           D  +K +FLDIACF +G             +    V +  D    K+L+ +     + MH
Sbjct: 456 DYYEKIIFLDIACFFDGLKLKLELINLLLKDRHYSVSTKLDRLKDKALVTISQENIVSMH 515

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           D++++   EIV +ES+  PG R+RL    DIY +L  + G E+I  +++ ++++ +E+ +
Sbjct: 516 DIIQETAWEIVHQESVEEPGSRSRLLDPDDIYHILNDDKGGESIRSMAIRLSEI-KELQL 574

Query: 477 NSYAFSKMPKLRFLRFYG--DKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAE 530
           +   F+KM KL+FL  Y    KN+  +S   G+ F   E+R+L W   PL++L     AE
Sbjct: 575 SPRVFAKMSKLKFLDIYTKESKNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAE 634

Query: 531 KLVSLKMPCTKVEQLWDDVQRL---------PSSLCT----FKTPITFEIIDCKMLERLP 577
            LV L +P +++++LW  V+ L          S+L T    F    +  ++D +    L 
Sbjct: 635 NLVRLSLPYSRLKKLWHGVKDLVNLNVLILHSSTLLTELPDFSKATSLAVLDLQFCVGLT 694

Query: 578 D------ELENLE--------------------------------------------YLT 587
                   L+NLE                                             L 
Sbjct: 695 SVHPSVFSLKNLEKLDLSGCISLTSLQSNTHLSSLSYLSLYNCTALKEFSVTSKHMSVLN 754

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           + GT+I+ELP S+G  S +  L L   +++E +P+SI++L++L  L   +C  L+TLPEL
Sbjct: 755 LDGTSIKELPSSIGLQSKLTFLNL-GRTHIESLPKSIKNLTRLRQLGFFYCRELKTLPEL 813

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMSSVL-----YVNLCNFLKLDPNELSEIVKDGWMKH 702
           P +L +L+   C SL+ +    S+ S  L      V   N LKL+   L  I  +  +  
Sbjct: 814 PQSLEMLAVVGCVSLQNVEFR-STASEQLKEKRKKVAFWNCLKLNEPSLKAIELNAQINM 872

Query: 703 SLYEERGIKK----------------SMY-FPGNEIPKWFRHQSMGSSATLKT--RPPRP 743
             +  R I +                SMY +PG++IP+W  + +             P  
Sbjct: 873 ISFSYRHISELDHDNRDQDHDQNLNHSMYLYPGSKIPEWLEYSTTTHDYITIDLFSAPYF 932

Query: 744 AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLYSWFLGK 802
           +    +++F         + LK F    GEDD +G  VY      +R   G         
Sbjct: 933 SKLGFILAFIIPTTTSEGSTLK-FEINDGEDDGEGIKVY-----LRRPRHG--------- 977

Query: 803 ISYVESDHVFL 813
              +ESDHV+L
Sbjct: 978 ---IESDHVYL 985


>gi|357514703|ref|XP_003627640.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
 gi|355521662|gb|AET02116.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
          Length = 1151

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 264/722 (36%), Positives = 393/722 (54%), Gaps = 85/722 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRGEDTR NFTS LH  L    I+T+ID ++ +G+ + + L   I+AS + +++
Sbjct: 14  HDVFISFRGEDTRTNFTSFLHAALCKNHIETYIDYRIEKGEEVWEELEKAIKASALFLVV 73

Query: 62  FSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           FSE YASS W                        FYR++ SHVRKQ+ S+     + +K+
Sbjct: 74  FSENYASSTWCLNELVEIMKCKKNDEDNVVVIPVFYRIEASHVRKQTGSYHTALLKQKKQ 133

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +K++RWK AL E A+LSGFDS+  R E+ LI +I   VL++L+  + ++ + L   + 
Sbjct: 134 GKDKIQRWKIALFEVANLSGFDSSTYRTEADLIGDIIKAVLQKLNQKYTNELRCLFIPDE 193

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           +   IESLL + S  V  + IWG+GGI K T+A A+F K+S  +EGS F  NV E  +  
Sbjct: 194 NYSSIESLLKVDSREVRTIGIWGMGGIGKTTLAAAIFQKVSSMYEGSCFLENVTEESKRH 253

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVTS---------- 261
           G+     +LLS+L   G   +IE+        + RL R K  IV DDV +          
Sbjct: 254 GLSYTYNRLLSKLL--GEDLHIETPKVISSMVMKRLKRMKAFIVLDDVRTLELLDNLIGA 311

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+TTRDK VL     ++ +++KE+   ++ +LF   AF     +  + E
Sbjct: 312 GHDCLGVGSRVIVTTRDKHVLTGGGIDEIHQVKEMNSQNSIRLFSLNAFKKILPNEGYEE 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +++  + Y +G PLALKVLG +L  +SK+ W SA+ KL+ IP+ EI++VL++SYD LDD+
Sbjct: 372 ISNNVVSYTKGNPLALKVLGSFLRTKSKKEWNSALNKLKEIPNAEIQKVLRLSYDELDDT 431

Query: 375 QKNVFLDIACFLEG-EHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           +KN+FLD+ACF +G      V  I +A              K+L+ +     I+MHDL++
Sbjct: 432 EKNIFLDVACFFKGFGSSSSVTKILNACGFFADIGIRNLLDKALVTITSENFIKMHDLIK 491

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MGREIVR+ESI +P +R+RLW+  +I  VL  N GT A+E I LDM++    I++NS A
Sbjct: 492 QMGREIVREESIKNPRQRSRLWNADEICDVLTDNNGTTAVESICLDMDQTTC-INLNSNA 550

Query: 481 FSKMPKLRFLRFYGDKNKCM----VSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKL 532
           F+KMP L+ L F       M    V  LEGV F    +R   W   PL +L  N     L
Sbjct: 551 FTKMPNLKMLAFNDHHQDVMGFNSVHLLEGVDFFPNNLRSFGWSAYPLNSLPSNFSPSNL 610

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLTV 588
           V L +P + +E+LW+  Q  P SL       +  +++C      P+    +LEN E +  
Sbjct: 611 VELYLPYSNLEKLWNGAQNFP-SLERIDLSKSARLLECPNFSNAPNLKHIKLENCESICH 669

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
              +I  LP+       ++ L +S   +L+ +  S R  S    L+   C  LQ    +P
Sbjct: 670 VDPSIFNLPK-------LEDLNVSGCKSLKSLYSSTRSQS-FQRLYAGECYNLQEFISMP 721

Query: 649 CN 650
            N
Sbjct: 722 QN 723



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + E+P+S+  LS ++ L L     +  +PESI  L +L F  +++CE LQ++P LP ++ 
Sbjct: 805 LSEIPDSISLLSSLENLGLFA-CPIISLPESINCLPRLMFFEVANCEMLQSIPSLPQSIQ 863

Query: 653 LLSARNCTSLEKL 665
                NC SL+ +
Sbjct: 864 SFRVWNCESLQNV 876


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 274/760 (36%), Positives = 412/760 (54%), Gaps = 84/760 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R  F  HL+  L  K I TF DD+ L +G  IS  L+ +IE S IA+I
Sbjct: 18  YDVFLSFRGEDVRKTFVDHLYLALEQKCINTFKDDEKLEKGKFISPELVSSIEESRIALI 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+S W                      FY VDPS VRKQ   FG  FS+   RF
Sbjct: 78  IFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVRKQKSIFGEAFSKHEARF 137

Query: 100 PE-KMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVG 155
            E K+++W+ AL EAA++SG+D  +     E++++E+IA D++ RL +   + N + LVG
Sbjct: 138 QEDKVQKWRAALEEAANISGWDLPNTANGHEARVMEKIAEDIMARLGSQRHASNARNLVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  + ++  +L IGS GV  L I G+ G+ K T+A  +++ I   F+G+ F   VR+  
Sbjct: 198 MESHMHKVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRS 257

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIES------QLNRLARKKVRIVFDDVT--------- 260
              G++ LQ+ LLSE+     +R  +S      Q  RL  KKV +V DDV          
Sbjct: 258 AKQGLERLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+DK +L      K YRMK L   ++ +LF Q AF  +       
Sbjct: 318 GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFE 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+ + IK+  G+PLALKVLG +L GR  + W S + +L+ IP  EI + L+ S+  L +
Sbjct: 378 DLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEILKKLEQSFTGLHN 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           +++ +FLDIACF  G+ +D V  I ++              K LI + L  RI +H L++
Sbjct: 438 TEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITI-LQGRITIHQLIQ 496

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMG  IVR+E+ + P   +R+W  +DI  VL++N GT+  EG+SL +     E++    A
Sbjct: 497 DMGWHIVRREATDDPRMCSRMWKREDICPVLERNLGTDKNEGMSLHLTN-EEEVNFGGKA 555

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           F +M +LRFL+F   +N  +    E +P  E+R L+W   P K+L  +   ++LV LK+ 
Sbjct: 556 FMQMTRLRFLKF---RNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGDQLVGLKLK 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            +++ QLW    +    L   K      +   + L R PD     NLE L ++  T++ E
Sbjct: 612 KSRIIQLW----KTSKDLGKLK---YMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVE 664

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+  L  +  L L N  NL+ +P+ IR L KL  L ++ C +L+T PE+   +  L+
Sbjct: 665 INFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEKMNCLA 723

Query: 656 A--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
                 TSL +LPA + ++S V  +NL  C  L+  P+ +
Sbjct: 724 ELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSI 763



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 54/306 (17%)

Query: 473  EIHMNSYAFSKMP-KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
            E+++ + + S++P  +  L   G  N     HLE +P +  R     +C LKTL++    
Sbjct: 724  ELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFR----LKC-LKTLDVSG-- 776

Query: 532  LVSLKMPCTKVEQLWDD----------------VQRLPSSLCTFKTPITFEIIDCKML-- 573
                   C+K++ L DD                +Q +PSS+   K      +  C  L  
Sbjct: 777  -------CSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSS 829

Query: 574  ---------ERLPDELENLE------YLTVKGTTIRE--LPESLGRLSWVKRLILSNNSN 616
                     + +    +NL        L +    I +  +  +LG LS ++ LIL+ N N
Sbjct: 830  QVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGN-N 888

Query: 617  LERIPE-SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
               IP  SI   ++L  L +  C RL++LPELP ++  + A  CTSL  +   L+    +
Sbjct: 889  FSNIPAASISRFTRLKRLKLHGCGRLESLPELPPSIKGIFANECTSLMSIDQ-LTKYPML 947

Query: 676  LYVNLCNFLKLDPNELSEIVKDGWMKHSLYE-ERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
                  N  +L  N+    + D  +K  L      ++  +Y PG EIP+WF ++S G+ +
Sbjct: 948  SDATFRNCRQLVKNKQHTSMVDSLLKQMLEALYMNVRFCLYVPGMEIPEWFTYKSWGTQS 1007

Query: 735  TLKTRP 740
                 P
Sbjct: 1008 MSVALP 1013


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1281

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 264/784 (33%), Positives = 409/784 (52%), Gaps = 120/784 (15%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIII 61
           DVF+SFRGED R  F SHL        I  F DD  L RG +IS  L+  I+ S  AI++
Sbjct: 17  DVFVSFRGEDVRKTFVSHLFCEFDRMGINAFRDDLDLQRGKSISPELIDAIKGSRFAIVV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S  YA+S W                      FY VDPS VR+Q  SFG        +  
Sbjct: 77  VSRNYAASSWCLDELLKIMECKDTISQTILPIFYEVDPSDVRRQRGSFGEDVESHSDK-- 134

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           EK+++WK AL + A +SG DS   R ESKLI++I  D+  +L  T +  +KGL+G+   +
Sbjct: 135 EKVRKWKEALKKLAAISGEDSRNWRDESKLIKKIVRDISDKLVLTSRDDSKGLIGMSFHL 194

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           + ++S++ I  + V  + IWG+GG+ K TIA  ++N++S  F+   F  NV+E     G+
Sbjct: 195 DFLQSMMSIEDKDVRMVGIWGMGGVGKTTIAKYLYNQLSGRFQAHCFMENVKEVCNRYGV 254

Query: 221 KDLQKKLLSELSKD------GNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
           + LQ++ L  + ++      G++        R   K+V IV DDV               
Sbjct: 255 RRLQEEFLCRMFRERHKEAWGSVSCCSMIRERFRHKRVLIVLDDVDRSEQLNELVKEIDW 314

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HLDASHIELTD 317
              GSR+I+TTRD+ +L +   +  Y++K L   +A +LFC +AF  +  +     EL+ 
Sbjct: 315 FGPGSRIIVTTRDRHLLLSHGIDLVYKVKCLPKREALQLFCNYAFREEIRIPHGFQELSV 374

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           +AI YA G+PLAL+VLG +L  RS+  WES + +L+  PH +I EVL++SYD LD+ +K 
Sbjct: 375 QAINYASGLPLALRVLGSFLYRRSQREWESTLARLKTYPHSDIMEVLRVSYDGLDEQEKA 434

Query: 378 VFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGR 424
           +FL I+CF   +H D V  + D               KSLI +     I+MHDLL  MGR
Sbjct: 435 IFLYISCFYNMKHVDYVTKLLDICGFAAEIGITILTEKSLIFVS-NGNIKMHDLLEQMGR 493

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR++++N+P +R  +W  +DI  +L +N+GT+ +EGISL++++++ E+  +  AF  +
Sbjct: 494 EIVRQQAVNNPAQRLLVWDPEDICDLLSENSGTQLVEGISLNLSEIS-EVFASDRAFEGL 552

Query: 485 PKLRFLRFY-----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
             L+ L FY     G+    + + L  +P  ++R+L W   PLKT+    C E LV L M
Sbjct: 553 SNLKLLNFYDLSFDGETRVHLPNGLSYLP-RKLRYLRWDGYPLKTMPSRFCPEFLVELCM 611

Query: 538 PCTKVEQLWDDVQRLPS-----------------------------SLCTFKTPIT---- 564
             + +E+LWD +Q L +                             S C     +T    
Sbjct: 612 SNSDLEKLWDGIQPLTNLKKMDLSRCKYLVEIPDLSKATNLEELNLSYCQSLVEVTPSIK 671

Query: 565 -------FEIIDCKMLERLP--DELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNN 614
                  F + +C  L+ +P    L++LE + + G +++   PE    +SW  R +  ++
Sbjct: 672 NLKGLSCFYMTNCIQLKNIPIGITLKSLETVRMSGCSSLMHFPE----ISWNTRRLYLSS 727

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSS 671
           + +E +P SI  LS L  L +S C+RL+TLP    +L  L + N   C  LE LP  L +
Sbjct: 728 TKIEELPSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQN 787

Query: 672 MSSV 675
           ++S+
Sbjct: 788 LTSL 791



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 133/312 (42%), Gaps = 41/312 (13%)

Query: 570  CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
            C  L R  D    L  L++    + E+P S+G L  +  + LS NS  E IP SI+ L++
Sbjct: 950  CPPLARFDD----LRALSLSNMNMVEIPNSIGNLWNLLEIDLSGNS-FEFIPASIKRLTR 1004

Query: 630  LTFLFISHCERLQTLP-ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            L  L +++C+RLQ LP ELP  L  +   NCTSL  +    +      +V   N  KLD 
Sbjct: 1005 LNRLNLNNCQRLQALPDELPRGLLYIYIHNCTSLVSISGCFNQYCLRQFVA-SNCYKLD- 1062

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
             + ++I+    MK     E    +  YFPG++IP  F HQ MG S  L  + P+    + 
Sbjct: 1063 -QAAQILIHCNMKL----ESAKPEHSYFPGSDIPSCFNHQVMGPS--LNIQLPQSESSSD 1115

Query: 749  LISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLY----SWFLGKIS 804
            ++ F+ C ++             G+   +       C  K   +  L      W+    +
Sbjct: 1116 ILGFSACIMIGV----------DGQYPMNNLKIHCSCILKDADDCELVVMDEVWYPDPKA 1165

Query: 805  YVE----SDHVFL---GCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFV 857
            +      +DH+ L    C S G   +     EFS        F P    GEVKKC +H +
Sbjct: 1166 FTNMCFGTDHLLLFSRTCMSMGA--YNEALFEFSIENTEGDSFSPL---GEVKKCAVHLI 1220

Query: 858  YAQDSADHILKD 869
              +D       D
Sbjct: 1221 SFKDMMQEFSND 1232



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)

Query: 522 LKTLNICAEKLVSLKM----PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           L+TL      LVSLK      C ++E L       P +L    +  T E+  C  +   P
Sbjct: 754 LRTLPSYLRHLVSLKSLNLDGCKRLENL-------PGTLQNLTSLETLEVSGCLNVNEFP 806

Query: 578 DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
               N+E L +  T+I E+P  +  LS ++ L +S N  L+ +P SI  L  L  L +S 
Sbjct: 807 RVATNIEVLRISETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLKLSG 866

Query: 638 CERLQTLPELPCNLGLLSARNC--------TSLEKLPAGLSSMSSVLYVNLC-NFLKLDP 688
           C  L++ P   C        +C        TS+++LP  + ++ ++  +      ++  P
Sbjct: 867 CSVLESFPPEICQ-----TMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAP 921

Query: 689 NELSEIVKDGWMK--HSLYEERGIKKSMYFP 717
             ++ + +   +   +SLY   G+  S+  P
Sbjct: 922 RSIARLTRLQVLAIGNSLYTPEGLLHSLCPP 952


>gi|74231152|gb|ABA00702.1| disease resistance protein [Phaseolus vulgaris]
          Length = 753

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 268/750 (35%), Positives = 398/750 (53%), Gaps = 136/750 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTRDNF SHL+  L  K+I+ +ID +L+RG+ IS +L   IE S I +++
Sbjct: 17  HDVFLSFRGEDTRDNFISHLYAALQRKNIEAYIDYRLLRGEEISPALHSAIEESKIYVLV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY+VDPS +RKQ H +   F    +RF 
Sbjct: 77  FSENYASSTWCLNELTKILDCKKRFGRDVIPVFYKVDPSTIRKQEHRYKEAFDEHEQRFK 136

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              +K++ WK+ALTEAA LSG            +E+I  D+L++L+    S ++G++G+E
Sbjct: 137 HDMDKVQGWKDALTEAAGLSG------------VEKIVEDILRKLNRYSTSYDQGIIGIE 184

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            +I  I+SLL + S  V  + I G+GGI K TI   ++ K++  F+ S   L+V++  + 
Sbjct: 185 KNIGGIQSLLHLESPDVRIIGICGMGGIGKTTICDQIYQKLALQFDSSSLVLDVQDKIQR 244

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT----------------S 261
            GI  ++ K LSEL K+    +      RL R KV ++ DDVT                 
Sbjct: 245 DGIDSIRTKYLSELLKEEKSSSSPYYNERLKRTKVLLILDDVTDSAQLQKLIRGSDSFGQ 304

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG-DHLDASHIELTDKAI 320
           GSR+I+T+RD+QVL+N  A+  Y +KEL   D+ KLF   AF      + S+++L+++ +
Sbjct: 305 GSRIIMTSRDRQVLRNAGADDIYEVKELNLDDSQKLFNLHAFKQKSSAEKSYMDLSEEVL 364

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YA+G+PLAL++LG  L GR++E WES ++KL+   H+ I  VLK+SYD L++ +KN+FL
Sbjct: 365 GYAEGIPLALQILGSLLYGRTREAWESELQKLKKGQHLGIFNVLKLSYDGLEEEEKNIFL 424

Query: 381 DIACFLEGEHRDEVISIFD--ASKSLINLDLFY----------RIRMHDLLRDMGREIVR 428
           DIACF  G +   V    D     S I +D+            RI MHDL+++MG+EIVR
Sbjct: 425 DIACFYRGHNEIAVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIQEMGKEIVR 484

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           KE   HPGKR+RL++ ++I +VL+KN      EG+  +   + R  H+            
Sbjct: 485 KECPQHPGKRSRLFNAEEICEVLRKN------EGVPSNFQNLKRLCHL------------ 526

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDD 548
                 D + C  S L   PF ++ H+++    LK L++           C+K+E     
Sbjct: 527 ------DLSHC--SSLTIFPF-DLSHMKF----LKQLSLRG---------CSKLEN---- 560

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
                                   L ++ D LE+L  L + GT I+ LP SL RL  ++ 
Sbjct: 561 ------------------------LPQIQDTLEDLVVLILDGTAIQALPSSLCRLVGLQE 596

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKLP 666
           L L +  NLE IP SI  L++L  L ++HC  LQT P    NL L  L    C+SL   P
Sbjct: 597 LSLCSCLNLEIIPSSIGSLTRLCKLDLTHCSSLQTFPSTIFNLKLRNLDLCGCSSLRTFP 656

Query: 667 AGLSSMSSVLYVNL-CNFLKLDPNELSEIV 695
                  +  ++NL C  +K  P+  + +V
Sbjct: 657 EITEPAPTFDHINLICTAVKELPSSFANLV 686


>gi|357468659|ref|XP_003604614.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505669|gb|AES86811.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1160

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 274/791 (34%), Positives = 409/791 (51%), Gaps = 105/791 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FTSHL   L    I  F DDQ L RG++IS SLL  IE S IA+I
Sbjct: 27  YDVFLSFRGEDTRASFTSHLTFSLQNAGIIVFKDDQSLERGEHISTSLLQAIEISRIAVI 86

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL---- 95
           +FS+ YA S W                      FY VDPS VR+Q+  FG+ F  L    
Sbjct: 87  VFSKNYADSSWCLRELVQIMSCYSTIGQVVLPVFYDVDPSEVRRQTGDFGKSFQNLLNRI 146

Query: 96  -----------------RKRFP----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEI 134
                            R  FP    + +++W +AL  AA L+GF     R ES++I +I
Sbjct: 147 SQEEERRVLKWNDGSLQRDDFPFSNKDMVRKWIDALHTAAGLAGFVVLNSRNESEVIRDI 206

Query: 135 ANDVLKRLDATFQSKNKGLVGVECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGA 193
             +V + LD T        VGV+  ++++  LL    S     L +WG+GGI K TIA +
Sbjct: 207 VENVTRLLDKTDLFIADNPVGVDSRVQDMIQLLETQQSNDALLLGMWGMGGIGKTTIAKS 266

Query: 194 VFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGN--MRNIESQLN----R 246
           ++NKI R+FEG  F  N+RE  E+  G   LQ++L++++ KD    +++IES  +    R
Sbjct: 267 IYNKIGRNFEGRSFLENIREVWEQASGQLYLQERLMNDILKDTTTKIQSIESGKSILKER 326

Query: 247 LARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELV 290
           L  K+V IV DDV                  GSR+IITTRDK +L+    +K Y MKE+ 
Sbjct: 327 LCHKRVLIVLDDVNKLDQLNALCGSCKWFAPGSRIIITTRDKHILRGKQVDKIYIMKEMD 386

Query: 291 YADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMR 350
            +++ +LF   AF          E++   +KY+ G+PLAL+VLG YL  R    W S + 
Sbjct: 387 ESESLELFSWHAFKQTRPREDFSEISKNVVKYSAGLPLALEVLGSYLFDREILEWRSVLD 446

Query: 351 KLEIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA--------- 400
           KL+ IP+ ++ + LKISYD L DD+QK +FLDI+CF  G  R++VI I D          
Sbjct: 447 KLKRIPNDQVHKKLKISYDGLNDDTQKEIFLDISCFFIGMDRNDVIRILDGCGFFAGIGI 506

Query: 401 ----SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
                +SL+ +D   ++ MHDLLRDMGREI+R++S   P + +RLW H+D+  VL ++TG
Sbjct: 507 SVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKEPEEHSRLWFHEDVIDVLLEHTG 566

Query: 457 TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE 516
           T+A+EG+SL +   + +   ++  F  M KLR L+  G +      HL      ++R L+
Sbjct: 567 TKAVEGLSLKLPGRSAQ-RFSTKTFENMKKLRLLQLSGVQLDGDFKHLS----RKLRWLQ 621

Query: 517 WPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLE 574
           W   PL  +  N     LVS+ +  + +  +W ++Q +       +      +   + L 
Sbjct: 622 WNGFPLTCIPSNFYQRNLVSIVLENSNIRLVWKEMQGM-------EQLKILNLSHSQYLT 674

Query: 575 RLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
           + PD   L NLE L +K    + E+ +S+G L  +  + L +  +L  +P +I  L  L 
Sbjct: 675 QTPDFSYLPNLEKLVLKDCPRLSEISQSIGHLKKILLINLKDCISLCNLPRNIYTLKSLK 734

Query: 632 FLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
            L +S C  + TL E    +  L+    N T + K+P  +     + +++LC +     +
Sbjct: 735 TLILSGCSMIDTLEEDLEQMESLTTLIANNTGITKVPFSIVRSKRIGFISLCGYEGFSRD 794

Query: 690 ELSEIVKDGWM 700
               I+   WM
Sbjct: 795 VFPSIIS-SWM 804


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 288/864 (33%), Positives = 448/864 (51%), Gaps = 135/864 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF DD+ L +G  I+  LL  IE S I II
Sbjct: 22  YDVFLSFRGEDTRSTFTDHLYSALVSNGIHTFRDDEELEKGGVIAGELLNAIEESRIFII 81

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IFS+ YA+S W                       FY VDPS VRKQ+ ++G  F+   K 
Sbjct: 82  IFSKDYANSSWCLNELEKITECMATNDQQIILPIFYHVDPSEVRKQTGTYGEAFADHEKD 141

Query: 99  F----PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 EK+++W+ ALTEA++L+G+D    + ESKLI EI +D+LK+L+      N+ + 
Sbjct: 142 ADQEKKEKIQKWRIALTEASNLAGYDRQKYQYESKLIMEIIDDILKKLNPKVLYVNEDIC 201

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGIS---KITIAGAVFNKISRHFEGSYFALNV 211
           G E  ++E++SLL I  E +  +R+ GI GI    K TIA  V+N +  HF+GS F  +V
Sbjct: 202 GKELRLKELKSLLSI--ELIDDVRMIGIYGIGGIGKTTIAKMVYNDVLCHFKGSSFLEDV 259

Query: 212 REAEET--GGIKDLQKKLLSELS-KDGNMRNIESQLN----RLARKKVRIVFDDVT---- 260
           +E  +   G ++ LQ+ L   L  KD  + NI+  +N    RL RK++ ++ DDV     
Sbjct: 260 KERSKCHHGRLQLLQEFLHGTLMVKDLKLSNIDEGINMIKNRLCRKRILLILDDVDHLDQ 319

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+IITTRDK +L     +  Y +KEL + +A +LF + AF  +  
Sbjct: 320 LKLLVGSCEWFGPGSRIIITTRDKHLLNVHRVDAVYEVKELDHKEAIQLFSRHAFKQNIP 379

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
             ++ +L++  I YA+G+PLALKVLG +L G + + W+SA+ KL+  P++EI  VL+IS+
Sbjct: 380 PKNYEDLSNCVINYAKGLPLALKVLGSFLYGMTIDQWKSALDKLKGKPNMEIHNVLRISF 439

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFY------------RIRMH 416
           D LD ++K +FLDIACF +GE +D +  I D      N+ L              +I MH
Sbjct: 440 DGLDHTEKQIFLDIACFFKGEDKDFISRILDGCNFFANIGLKILCDRCLITISNSKIHMH 499

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL++ MG+EIVR++  + P K +RLW   DIY+   +  G + IE ISLD +++ +EI +
Sbjct: 500 DLIQQMGQEIVREKYPDDPNKWSRLWDPDDIYRAFLRKEGMKKIEAISLDFSRL-KEIQL 558

Query: 477 NSYAFSKMPKLRFLRFY--------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
           ++  FS+M KLR L+ Y          ++K  +     +P  E+R+L W    L  L  N
Sbjct: 559 STKVFSRMKKLRLLKVYWSDHSSFTKKESKVFIPKDFEIPSHELRYLYWEGYSLNCLPSN 618

Query: 527 ICAEKLVSLKMPCTKVEQLW---------------------------------------- 546
              E LV L++  + +++LW                                        
Sbjct: 619 FHGENLVELELRYSTIKRLWKGSKGLEKLKFINLSHSEKLTKISKFSGMPNLERLNLEGC 678

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRL 603
             ++++ SSL   K   + ++ DC+ LE  P   ELE+LE L + G +   + PE  G +
Sbjct: 679 TSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSIELESLEVLDISGCSNFEKFPEIHGNM 738

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS--ARNCTS 661
             ++++ L N S ++ +P SI  L  L  L +++C   +  PE+  ++  L       T+
Sbjct: 739 RHLRKIYL-NQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTA 797

Query: 662 LEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG- 718
           +++LP+ +  ++ +  ++L  C  L+  P+ +  +       H +Y   G      FP  
Sbjct: 798 IKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLE----FLHGIY-LHGCSNLEAFPDI 852

Query: 719 -NEIPKWFRHQSMGSSATLKTRPP 741
             ++    R + MG+S  LK  PP
Sbjct: 853 IKDMENIGRLELMGTS--LKELPP 874



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 167/408 (40%), Gaps = 112/408 (27%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            +++RLPSS+C  +      +  C  LE  PD   ++EN+  L + GT+++ELP S+  L 
Sbjct: 821  NLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLK 880

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-----------CNLGL 653
             ++ L L+N  NL  +P SI ++  L  L + +C +LQ LP+ P           C+L  
Sbjct: 881  GLEELDLTNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMTLQCSDMIGLCSLMD 940

Query: 654  LSARNC--------------TSLEKL----------PAGLSSMSSVLYVNLCNFLK---- 685
            L+   C              +SL +L          P+G+S +  +L +N C  L+    
Sbjct: 941  LNLSGCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGISQL-RILQLNHCKMLESITE 999

Query: 686  -------LDPNELSEIVKDGW-------------------MKHSLYEERGIKKSMYFPGN 719
                   LD ++ + +                        ++H +   + I  ++  PG+
Sbjct: 1000 LPSSLRVLDAHDCTRLDTLSSLSSLLQCSLFSCFKSAIQELEHGIESSKSIGINIVIPGS 1059

Query: 720  E-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV----------FPAFLKYF- 767
              IP+W  +Q +GS  T++  P      N  + FA C++ V              L  F 
Sbjct: 1060 RGIPEWISNQELGSEVTVEL-PMNWCEDNDFLGFALCSLYVPLDDAFEDGGLECRLIAFH 1118

Query: 768  --RHKSGEDDW---------DGNVYAV--CCDWKRKSEGHLYSWFLGKISYVESDHVFLG 814
              + +  +D W         +G V  +  CCD    S+  L+  +  +I+ ++  H    
Sbjct: 1119 GDQFRRVDDIWFKSSCKYYENGGVSYLHKCCDNGDVSDCVLWVTYYPQIA-IKKKHRSNQ 1177

Query: 815  CNSFGGEYFGP-NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
               F   + G  N    +F+               VKKCG+H +YAQD
Sbjct: 1178 WRHFKALFNGLYNCGSKAFK---------------VKKCGVHLIYAQD 1210



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 7/140 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+   ++    ++ +C   E+ P+   ++++L +L + GT I+ELP S+  L+ 
Sbjct: 751 IKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTG 810

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSL 662
           ++ L L    NL R+P SI  L  L  +++  C  L+  P++     N+G L     TSL
Sbjct: 811 LRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMG-TSL 869

Query: 663 EKLPAGLSSMSSVLYVNLCN 682
           ++LP  +  +  +  ++L N
Sbjct: 870 KELPPSIEHLKGLEELDLTN 889


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 274/760 (36%), Positives = 409/760 (53%), Gaps = 84/760 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R  F  HL+  L  K I TF DD+ L +G  IS  L+ +IE S IA+I
Sbjct: 18  YDVFLSFRGEDVRKTFVDHLYLALQQKCINTFKDDEKLEKGKFISPELMSSIEESRIALI 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+S W                      FY VDPS VRKQ   FG  FS+   RF
Sbjct: 78  IFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVRKQKSIFGEAFSKHEARF 137

Query: 100 PE-KMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVG 155
            E K+++W+ AL EAA++SG+D  +     E++++E+IA D++ RL +   + N + LVG
Sbjct: 138 QEDKVQKWRAALEEAANISGWDLPNTSNGHEARVMEKIAEDIMARLGSQRHASNARNLVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  + ++  +L IGS GV  L I G+ G+ K T+A  +++ I   F+G+ F   VR+  
Sbjct: 198 MESHMLKVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRS 257

Query: 216 ETGGIKDLQKKLLSE------LSKDGNMRNIESQLNRLARKKVRIVFDDVT--------- 260
              G++ LQ+ LLSE      L  + +      Q  RL  KKV +V DDV          
Sbjct: 258 AKQGLERLQEILLSEILVVKKLRINNSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+DK +L      K YRMK L   ++ +LF Q AF  +       
Sbjct: 318 GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFE 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+ + IK+  G+PLALKVLG +L GR  + W S + +L+ IP  EI + L+ S+  L +
Sbjct: 378 DLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEILKKLEQSFTGLHN 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           +++ +FLDIACF  G+ +D V  I ++              K LI + L  RI +H L++
Sbjct: 438 TEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITI-LQGRITIHQLIQ 496

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMG  IVR+E+ + P   +RLW  +DI  VL++N GT+  EG+SL +     E++    A
Sbjct: 497 DMGWHIVRREATDDPRMCSRLWKREDICPVLERNLGTDKNEGMSLHLTN-EEEVNFGGKA 555

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           F +M +LRFL+F   +N  +    E +P  E+R L+W   P K+L  +   ++LV LK+ 
Sbjct: 556 FMQMTRLRFLKF---RNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGDQLVGLKLK 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            +++ QLW    +    L   K      +   + L R PD     NLE L ++  T++ E
Sbjct: 612 KSRIIQLW----KTSKDLGKLK---YMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVE 664

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+  L  +  L L N  NL+ +P+ IR L KL  L ++ C +L+T PE+   +  L+
Sbjct: 665 INFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEKMNCLA 723

Query: 656 A--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
                 TSL  LPA + ++S V  +NL  C  L+  P+ +
Sbjct: 724 ELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSI 763



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)

Query: 473  EIHMNSYAFSKMP-KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
            E+++ + + S +P  +  L   G  N     HLE +P +  R     +C LKTL++    
Sbjct: 724  ELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSIFRL----KC-LKTLDVSG-- 776

Query: 532  LVSLKMPCTKVEQLWDD----------------VQRLPSSLCTFKTPITFEIIDCKMLER 575
                   C+K++ L DD                +  +PSS+   K      +  C  L  
Sbjct: 777  -------CSKLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSS 829

Query: 576  LPDELE--------NLEYLTVKGTTIR-----------ELPESLGRLSWVKRLILSNNSN 616
                          N + L+   + IR            +  +LG LS +K L+L  N N
Sbjct: 830  QVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCDISDGGILRNLGFLSSLKVLLLDGN-N 888

Query: 617  LERIPE-SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
               IP  SI  L++L  L +  C RL++LPELP ++  + A +CTSL  +   L+    +
Sbjct: 889  FSNIPAASISRLTRLKSLALRGCGRLESLPELPPSITGIYAHDCTSLMSIDQ-LTKYPML 947

Query: 676  LYVNLCNFLKLDPNELSEIVKDGWMKHSLYE-ERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
              V+  N  +L  N+    + D  +K  L      ++  +Y PG EIP+WF ++S G+ +
Sbjct: 948  SDVSFRNCHQLVKNKQHTSMVDSLLKQMLEALYMNVRFGLYVPGMEIPEWFTYKSWGTQS 1007

Query: 735  TLKTRP 740
                 P
Sbjct: 1008 MSVVLP 1013


>gi|147774169|emb|CAN63551.1| hypothetical protein VITISV_032106 [Vitis vinifera]
          Length = 924

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 280/796 (35%), Positives = 404/796 (50%), Gaps = 123/796 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L   +I TF DD+ L RG+ I+  LL  IE S IAII
Sbjct: 21  YDVFLSFRGEDTRKSFTDHLYSALIRNNIHTFRDDEELPRGEEIAPELLKAIEESRIAII 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQS----HSFGRHFSRL 95
           +FS+ YA S+W                      FY VDPS VRKQ+     +F  H    
Sbjct: 81  VFSKTYAHSKWCLDELVKIMECKXERGQIVIPIFYNVDPSEVRKQTGICGEAFTXHEENA 140

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   EK+++W+ A+ +A +L+G  +   R ES LI+EI  +V   L       N+ +VG
Sbjct: 141 DEERKEKIRKWRTAMEQAGNLAGHVAEN-RYESTLIDEIIENVHGNLPKIL-GVNENIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-- 213
           ++  +E++ SLL I S  V  + ++G+GGI K TI  A++N+IS  FE      NVR+  
Sbjct: 199 MDSRLEKLISLLKIESNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKES 258

Query: 214 AEETGGIKDLQKKLLSELSKDGN--MRNIESQL----NRLARKKVRIVFDDVTS------ 261
            + +G +K  QK L   L   G   ++N+   +    ++L+ KKV +  DDV        
Sbjct: 259 TKNSGLLKLQQKLLDDTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEH 318

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTR K +L     N  Y +K+L + +A +LFC++AF   HL   
Sbjct: 319 LIGKHNWFGPGSRIIITTRKKDLLTRHEVNDIYEVKKLNFHEALQLFCRYAFKQHHLKEG 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +L+ + ++YA G+PLALKVLG  L G+    W+S +RKLE +P++EI  VLKIS+D L
Sbjct: 379 YADLSHQVVRYADGLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEIVNVLKISFDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
           D +Q+ +FLDIACF +G   + V  I D S             +  I +     I MHDL
Sbjct: 439 DYTQRMIFLDIACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEMHDL 498

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L  MG+ IV +E  N PG+R+RLW H DIY+VLK+NTGTE IEGI LD++K + +I    
Sbjct: 499 LAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDK-SEQIQFTC 557

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVS 534
            AF +M +LR L    ++    +   E   F+  ++  L W    L++L  N     L  
Sbjct: 558 KAFERMNRLRXLVVSHNR----IQLPEDFVFSSDDLTCLSWDGYSLESLPSNFHPNDLAL 613

Query: 535 LKMPCTKVEQLWD----------------------------------------DVQRLPS 554
           LK+  + ++ LW                                          ++ LP 
Sbjct: 614 LKLSNSNIKLLWKGNMCLRNLRYIDLSHSQQLIELPNFSNVPNLEELILSGCVSLESLPG 673

Query: 555 SLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
            +   K  +T     C  L   P     +  LE L++  T I+ELP S+  L  ++ L L
Sbjct: 674 DIHKLKHLLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIKELPSSIELLEGLRNLYL 733

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCTSLEKLPA 667
            N  NLE +P SI +L  L  L +  C +L  LPE    +PC L +LS  N  S +    
Sbjct: 734 DNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPC-LEVLSL-NSLSCQLPSL 791

Query: 668 GLSSMSSVLYVNLCNF 683
              S+   LY++ CN 
Sbjct: 792 SGLSLLRELYLDQCNL 807


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 276/724 (38%), Positives = 392/724 (54%), Gaps = 88/724 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL   L  K I TFID++ L  G  IS +L+  IE+S ++II
Sbjct: 15  YDVFLSFRGEDTRNNFTAHLLKELRTKGIDTFIDEERLETGQVISPALVAAIESSKLSII 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRK 97
           + SE YASSRW                      FY VDPS VR     FG   ++  +  
Sbjct: 75  VLSENYASSRWCLEELVKILECKRTRGQRVLPIFYDVDPSDVRNHRGKFGEALAKHDVNL 134

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVL-KRLDATFQSKNKGLVGV 156
           R  +++  W+ ALTE A+LSG DS   + E+  IEEIA+ +  ++++       + LVG+
Sbjct: 135 RNMDRVPIWRVALTEVANLSGRDSRN-KNEATFIEEIASFIFHEKINMAQSDTAEDLVGI 193

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  + EIE LLC+ +  V  + IWG+ GI K T+AGA+F +    FEG  F  NV    E
Sbjct: 194 DSRLCEIEPLLCLKAADVRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENVGTELE 253

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             GI+ LQ+KLLS++   K+ ++    S    L  KKV IV D+V               
Sbjct: 254 REGIEGLQEKLLSKILGLKNLSLTGRPSIKAALGSKKVLIVLDNVKDQMIIEKIAKKRDW 313

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITT +K VL+     + Y +K+    +A KLF ++AF  DH     +EL+  
Sbjct: 314 FGVGSRIIITTTNKNVLRTHEVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFVELSKS 373

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I    G+PLA+K+LG  L  +SK  WES + KL     + I   L++SY+ L+D ++ +
Sbjct: 374 IIACTHGLPLAIKLLGDLLFEKSKHEWESKLDKLNKDLKLGI-NCLQMSYNELNDDEQCL 432

Query: 379 FLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACF +GE  D V  I D               KSLI +    +++MHDLL++MGRE
Sbjct: 433 FLDIACFFKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITIS-GNKLQMHDLLQEMGRE 491

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           +V ++S   PGKR RLW H+DI  VLK N GTE +EGISLD++ V  ++   + AF++M 
Sbjct: 492 VVCQKS-QEPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRFETPAFARMN 550

Query: 486 KLRFLRFYGD-----KNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLK 536
           KL+ L+ Y       K  C V   +G  F   E+R+L      LK+L  +  AE LV L 
Sbjct: 551 KLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHGYNLKSLPNDFNAENLVHLS 610

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE-----LENLEYLTVKG- 590
           MP + V+QLW   + +             + ID     RL +      + NLE L ++G 
Sbjct: 611 MPHSYVQQLWKGSKGMEK----------LKSIDLSHSTRLTETPNFSGVVNLEQLILQGC 660

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
            ++R+L  S+G L+ +K L L +   L+ + ESI  LS L  L +S C +L+  PE   N
Sbjct: 661 ISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPE---N 717

Query: 651 LGLL 654
           LG L
Sbjct: 718 LGKL 721



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 114/264 (43%), Gaps = 44/264 (16%)

Query: 613  NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
            N +N + +P  I  L  L +L   +C+RLQ LPELP ++G + A NCTSLE + +  S  
Sbjct: 817  NGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSLEAV-SNQSLF 875

Query: 673  SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGS 732
            SS++       LK  P   S+      ++H    +     ++  PG+ IP W  +QS G 
Sbjct: 876  SSLMIAK----LKEHPRRTSQ------LEHDSEGQLSAAFTVVAPGSGIPDWISYQSSGR 925

Query: 733  SATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE 792
              T+K  P     Y   ++FA C VV  P+ L Y        D    +   C  +   S 
Sbjct: 926  EVTVKLPPNWFTTY--FLAFASC-VVTSPSVLPY-------ADSINELCTKCTVFYSTSS 975

Query: 793  GHLYSWFLGKISY----VESDHVFLGCNSFGGEYFGPNYDEFSFRIHC------SFHFPP 842
                S+ +   S+    +ESDHV+L             Y  F   I+C       F F  
Sbjct: 976  CVSSSYDVFPRSHAEGRMESDHVWL------------RYVRFPISINCHEVTHIKFSFEM 1023

Query: 843  YL-ERGEVKKCGIHFVYAQDSADH 865
             L     +K+CG+  VY  D  ++
Sbjct: 1024 ILGTSSAIKRCGVGLVYGNDDENY 1047


>gi|357457201|ref|XP_003598881.1| TMV resistance protein N [Medicago truncatula]
 gi|355487929|gb|AES69132.1| TMV resistance protein N [Medicago truncatula]
          Length = 1270

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 267/782 (34%), Positives = 408/782 (52%), Gaps = 96/782 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRGEDTR +  SHL+  LS   I TF+DD+ L +G  +   LL  I+ S I +
Sbjct: 128 IYDVFINFRGEDTRKSLVSHLYAALSNAGINTFLDDEKLKKGWEVEPELLRAIQGSQICL 187

Query: 60  IIFSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRHFSRLR 96
           +IFSE Y  S W                        FY VDPS VR+Q   FG+    + 
Sbjct: 188 VIFSEHYTESSWCLVELVKIMEHRKTNNNSPVVIPIFYHVDPSVVRRQVGDFGKALEAIT 247

Query: 97  KRF------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN 150
           KR        E ++ WK ALT+AA++SG+DS++ R ES+L+ +I ++VL++L+ TF    
Sbjct: 248 KRIHPPKERQELLRTWKRALTQAANISGWDSSIFRSESELVNKIVDEVLRKLENTFLPTT 307

Query: 151 KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
           +  VG+E  ++++   +   S  V  + IWG+GG+ K T A  ++NKI R F    F  N
Sbjct: 308 EFPVGLESRVDQVMLSIENQSSKVSAVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFIEN 367

Query: 211 VREA-EETGGIKDLQKKLLSELSKDG-NMRNIESQL----NRLARKKVRIVFDDVTS--- 261
           +R+  E   G   LQ++LLS+L K    + NI S       RL+ KKV IV DDVT    
Sbjct: 368 IRQTCESDKGYIRLQQQLLSDLFKTKEKIHNIASGTITINKRLSAKKVLIVLDDVTKVQQ 427

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GS +I+TTRD  VL++   +     KE+   ++ +LF   AF     
Sbjct: 428 VKALCGNYKCLGLGSVLIVTTRDAHVLRSLEVDCVCTAKEMDENESLELFSWHAFRNATP 487

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
            A+  +L+   + Y  G+PLA++VLG YL  R+KE W+S + KLE IPH E++E LKISY
Sbjct: 488 RANFSDLSKNVVNYCGGLPLAVEVLGSYLFERTKEEWKSVLSKLEKIPHEEVQEKLKISY 547

Query: 369 DSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           D L DD++K +FLD+ CF  G+ RD V  I +               +SL+ ++   ++ 
Sbjct: 548 DGLTDDTKKAIFLDVCCFFIGKDRDYVTEILNGCGLFAGIGIAVLIERSLLKVEKNNKLG 607

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDL+RDMGREIVR  S N PG+R+RLW H+D + VL KNTGT+ +EG+ L++    R+ 
Sbjct: 608 MHDLIRDMGREIVRGSSTNDPGERSRLWLHEDAHSVLTKNTGTQKVEGLILNLQSKGRD- 666

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK--- 531
             ++  F +M  +R L+          +HL        + L W      T N C  K   
Sbjct: 667 SFSTNVFQQMQNMRLLQLDCVDLTGEFAHLS-------KQLRWVNWQRSTFN-CIPKDFY 718

Query: 532 ---LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
              LV L++  + V+Q+W + + L       K  I   +   K L+  PD  +L NLE L
Sbjct: 719 QGNLVVLELKFSNVKQVWKETKLLD------KLKI-LNLSHSKYLKSTPDFSKLPNLEKL 771

Query: 587 TVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +K   ++ E+  S+G L  +  + L + ++L  +P  I  L  +  L +  C ++  L 
Sbjct: 772 IMKDCPSLSEIHPSIGVLKKLLLINLKDCTSLGNLPREIYQLISVKTLILFGCSKIDKLE 831

Query: 646 ELPC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
           E      +L  L A N T +++ P  +    S++Y++LC +  L  +    ++   WM  
Sbjct: 832 EDIVQMKSLTTLVAAN-TGVKQAPFSIVRSKSIVYISLCGYEGLSRDIFPSLIW-SWMSP 889

Query: 703 SL 704
           ++
Sbjct: 890 TM 891


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 276/724 (38%), Positives = 392/724 (54%), Gaps = 88/724 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL   L  K I TFID++ L  G  IS +L+  IE+S ++II
Sbjct: 15  YDVFLSFRGEDTRNNFTAHLLKELRTKGIDTFIDEERLETGQVISPALVAAIESSKLSII 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRK 97
           + SE YASSRW                      FY VDPS VR     FG   ++  +  
Sbjct: 75  VLSENYASSRWCLEELVKILECKRTRGQRVLPIFYDVDPSDVRNHRGKFGEALAKHDVNL 134

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVL-KRLDATFQSKNKGLVGV 156
           R  +++  W+ ALTE A+LSG DS   + E+  IEEIA+ +  ++++       + LVG+
Sbjct: 135 RNMDRVPIWRVALTEVANLSGRDSRN-KNEATFIEEIASFIFHEKINMAQSDTAEDLVGI 193

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  + EIE LLC+ +  V  + IWG+ GI K T+AGA+F +    FEG  F  NV    E
Sbjct: 194 DSRLCEIEPLLCLKAADVRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENVGTELE 253

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             GI+ LQ+KLLS++   K+ ++    S    L  KKV IV D+V               
Sbjct: 254 REGIEGLQEKLLSKILGLKNLSLTGRPSIKAALGSKKVLIVLDNVKDQMIIEKIAKKRDW 313

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITT +K VL+     + Y +K+    +A KLF ++AF  DH     +EL+  
Sbjct: 314 FGVGSRIIITTTNKNVLRTHEVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFVELSKS 373

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I    G+PLA+K+LG  L  +SK  WES + KL     + I   L++SY+ L+D ++ +
Sbjct: 374 IIACTHGLPLAIKLLGDLLFEKSKHEWESKLDKLNKDLKLGI-NCLQMSYNELNDDEQCL 432

Query: 379 FLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACF +GE  D V  I D               KSLI +    +++MHDLL++MGRE
Sbjct: 433 FLDIACFFKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITIS-GNKLQMHDLLQEMGRE 491

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           +V ++S   PGKR RLW H+DI  VLK N GTE +EGISLD++ V  ++   + AF++M 
Sbjct: 492 VVCQKS-QEPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRFETPAFARMN 550

Query: 486 KLRFLRFYGD-----KNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLK 536
           KL+ L+ Y       K  C V   +G  F   E+R+L      LK+L  +  AE LV L 
Sbjct: 551 KLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHGYNLKSLPNDFNAENLVHLS 610

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE-----LENLEYLTVKG- 590
           MP + V+QLW   + +             + ID     RL +      + NLE L ++G 
Sbjct: 611 MPHSYVQQLWKGSKGMEK----------LKSIDLSHSTRLTETPNFSGVVNLEQLILQGC 660

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
            ++R+L  S+G L+ +K L L +   L+ + ESI  LS L  L +S C +L+  PE   N
Sbjct: 661 ISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPE---N 717

Query: 651 LGLL 654
           LG L
Sbjct: 718 LGKL 721



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 114/264 (43%), Gaps = 44/264 (16%)

Query: 613  NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
            N +N + +P  I  L  L +L   +C+RLQ LPELP ++G + A NCTSLE + +  S  
Sbjct: 817  NGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSLEAV-SNQSLF 875

Query: 673  SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGS 732
            SS++       LK  P   S+      ++H    +     ++  PG+ IP W  +QS G 
Sbjct: 876  SSLMIAK----LKEHPRRTSQ------LEHDSEGQLSAAFTVVAPGSGIPDWISYQSSGR 925

Query: 733  SATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE 792
              T+K  P     Y   ++FA C VV  P+ L Y        D    +   C  +   S 
Sbjct: 926  EVTVKLPPNWFTTY--FLAFASC-VVTSPSVLPY-------ADSINELCTKCTVFYSTSS 975

Query: 793  GHLYSWFLGKISY----VESDHVFLGCNSFGGEYFGPNYDEFSFRIHC------SFHFPP 842
                S+ +   S+    +ESDHV+L             Y  F   I+C       F F  
Sbjct: 976  CVSSSYDVFPRSHAEGRMESDHVWL------------RYVRFPISINCHEVTHIKFSFEM 1023

Query: 843  YL-ERGEVKKCGIHFVYAQDSADH 865
             L     +K+CG+  VY  D  ++
Sbjct: 1024 ILGTSSAIKRCGVGLVYGNDDENY 1047


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 290/786 (36%), Positives = 426/786 (54%), Gaps = 109/786 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NF+ HL+  L    I TF D ++L +G +I+  L   I+ S I II
Sbjct: 8   YDVFLSFRGEDTRKNFSDHLYTTLIANGIHTFRDSEELDKGGDIASELSRVIQKSRIFII 67

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YA+S+W                      FY V+PS VR QS S+G  FS   K  
Sbjct: 68  IFSRNYATSKWCLNELVKITERMTQKESTIHPVFYHVNPSEVRHQSGSYGEAFSNYEKDA 127

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E + +W+ ALT+  +LSG+  +  + ES+++  I ND+++RL+    +  K ++G+
Sbjct: 128 DLEKENIVKWRAALTQVGNLSGWHVDN-QYESEVLIGITNDIIRRLNREPLNVGKNIIGM 186

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              +E+++SL+ I S  VC + I GIGGI K TIA A++N IS  F GS F  NVRE  +
Sbjct: 187 SFHLEKLKSLMNIESNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRERSK 246

Query: 217 TGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDV----------- 259
              ++ LQ++LL  + +   ++  NIE  L    N L  KKV +V DDV           
Sbjct: 247 DNTLQ-LQQELLHGILRGKCLKVSNIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLAE 305

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                ++ S VIITTRDK+ L     +  Y +++L   ++ +LF +WAF  +    ++  
Sbjct: 306 EPEWFSTKSIVIITTRDKRFLTQYGKHVSYEVEKLNEEESIELFSRWAFKQNLPQEAYRN 365

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+   I+YA+G+PLALKVLG +  G+++  W+ A+ KLE IPH+EI+ VLKISYD L+D 
Sbjct: 366 LSYHIIEYAKGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNVLKISYDGLNDI 425

Query: 375 QKNVFLDIACFLEGEHRDEV------------ISIFDASKSLINLDLFYRIRMHDLLRDM 422
           +K +FLDIACF EGE ++ V            ISI    K LI + L  ++ MH+L++ M
Sbjct: 426 EKGIFLDIACFFEGEDKEVVSRILHNVSIECGISILH-DKGLITI-LENKLEMHNLIQQM 483

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+E    PGK +RLW  +D+Y+VL KNTGTEAIEGI LD++  + +I   + AF 
Sbjct: 484 GHEIVRQECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDIS-ASEQIQFTTEAFK 542

Query: 483 KMPKLRFLRFY--------------GDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL 525
            M +LR L  +              GD+ +    HL     +P  E+  L W    L++L
Sbjct: 543 MMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSLESL 602

Query: 526 --NICAEKLVSLKMPCTKVEQLWD--------DVQRLPSSLCTFKTP-IT----FEII-- 568
             N  A+ LV L + C+ ++QL +         V  L  S+   K P IT     EI+  
Sbjct: 603 PSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEILIL 662

Query: 569 -DCKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIP-E 622
             C  L  LP ++  L+ L      +   +R  PE   R+  ++ L LS  ++L+ +P  
Sbjct: 663 EGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLS-ETDLKELPSS 721

Query: 623 SIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
           S +HL  LT L ++ C  L  +P+  C   +L  LS   C  L+KLP  L S+  +  ++
Sbjct: 722 STKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLS 781

Query: 680 LCNFLK 685
           L NFL+
Sbjct: 782 L-NFLR 786



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 28/167 (16%)

Query: 504  LEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI 563
            L G  F E+  +E   CPL   ++C          C K+E L       PS +C  K+  
Sbjct: 1082 LAGNEFYELPTIE---CPLALDSLCLRN-------CEKLESL-------PSDICKLKSLK 1124

Query: 564  TFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERI 620
            +     C  L+  P+    +ENL  L +  T I ELP S+  L  ++ L + +  NL  +
Sbjct: 1125 SLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSL 1184

Query: 621  PESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
            PESI +L+ L  L +  C +L  LPE   NLG L      SLE+L A
Sbjct: 1185 PESICNLTSLKVLVVDCCPKLYKLPE---NLGSLR-----SLEELYA 1223



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 22/198 (11%)

Query: 551  RLPS--SLCTFKTPITFEIIDCKMLER-LPDE---LENLEYLTVKGTTIRE--LPESLGR 602
            +LPS   LC+ +     +I +  + +R +P++   L +L+ L +    + E  +P  +  
Sbjct: 1232 QLPSLSGLCSLRI---LDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYN 1288

Query: 603  LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
            LS ++ L+L  N +   IP+ I  L+ L  L +SHC+ L  +PE   +L +L   +CTSL
Sbjct: 1289 LSSLQALLLGGN-HFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSL 1347

Query: 663  EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL--YEERGIKKSMYFP-GN 719
            E     LSS S++L   L    K    +L E+  D  ++  +  Y   GI  S+  P  +
Sbjct: 1348 ET----LSSPSNLLQSCLLKCFKSLIQDL-ELENDIPIEPHVAPYLNGGI--SIAIPRSS 1400

Query: 720  EIPKWFRHQSMGSSATLK 737
             IP+W R+Q  GS    K
Sbjct: 1401 GIPEWIRYQKEGSKVAKK 1418



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 46/215 (21%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL-TVKGTTIR-ELPESLGRLSWVKRL 609
           +P S+C  ++        C  L++LP++LE+L  L ++    +R ELP  +         
Sbjct: 743 VPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELPCXV--------- 793

Query: 610 ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC-TSLEKLP-A 667
                ++   IP  I  L +L  L +SHC++L  +PELP +L  L       +L   P +
Sbjct: 794 ---RGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIPELPSSLRALDTHGSPVTLSSGPWS 850

Query: 668 GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFR 726
            L    S +    CNF K+                           ++ PG+  IPKW  
Sbjct: 851 LLKCFKSAIQETDCNFTKV---------------------------VFIPGDSGIPKWIN 883

Query: 727 HQSMGSSATLKTRPPRPAGYNKLISFAF-CAVVVF 760
               GS A  +  P      N  + F+  CA V+ 
Sbjct: 884 GFQKGSYAE-RMLPQNWYQDNMFLGFSIGCAYVLL 917


>gi|357468511|ref|XP_003604540.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505595|gb|AES86737.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1100

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 285/872 (32%), Positives = 437/872 (50%), Gaps = 130/872 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D RD F  HL      K I  F+D+ + RGD I  SL+  IE S I+++I
Sbjct: 99  YDVFVSFRGKDIRDGFLGHLVKAFRQKKINVFVDNIIKRGDEIKHSLVEAIEGSLISLVI 158

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ Y+SS W                      FY V    V  +           +K   
Sbjct: 159 FSKNYSSSHWCLDELVKIIECKKDRGQIIIPVFYGVRSKIVLDELE---------KKDNF 209

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD--ATFQSKNKGLVGVEC 158
            K++ WK AL ++ D++G   +  R +++L+EEI N VL RL   +     +KGL+G++ 
Sbjct: 210 SKVEDWKLALKKSTDVAGIRLSEFRNDAELLEEITNVVLMRLKMLSKHPVNSKGLIGIDK 269

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           SI  + SLL   S+ V  + IWG+ GI K TIA  +FN+    ++G  F   V E  +  
Sbjct: 270 SIAHLNSLLKKESQKVRVIGIWGMPGIGKTTIAEEIFNQNRSEYDGCCFLAKVSEKLKLH 329

Query: 219 GIKDLQK----KLLSELSKDGNMRNIESQLNR-LARKKVRIVFDDV-------------- 259
           GI+ L++    K+L+E  K      + S + R + R KV I+ DDV              
Sbjct: 330 GIESLKETLFTKILAEDVKIDTPNRLSSDIERRIGRMKVLIILDDVKDEDQLEMLFETLD 389

Query: 260 --TSGSRVIITTRDKQVL--KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
              S SR+I+T RDKQVL       + +Y +  L  +DA  LF   AF   HL+    E+
Sbjct: 390 WFQSDSRIILTARDKQVLFDNEVDDDDRYEVGVLDSSDALALFNLNAFKQSHLETEFDEI 449

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + + + YA+G PL LKVL   L G++KEVWES + KL+ +P  ++ +V+K+SYD LD  +
Sbjct: 450 SKRVVNYAKGNPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVKKVHDVVKLSYDDLDRLE 509

Query: 376 KNVFLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDL 418
           K  FLDIACF  G               E  + V    +    K+LI +     I MHD+
Sbjct: 510 KKYFLDIACFFNGLSLKVDYMKLLLKDCEGDNSVAVGIERLKDKALITISEDNVISMHDI 569

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGRE+VR+ES  +P KR+RLW H +I  VLK + GT+AI  I L+++ + R++ ++ 
Sbjct: 570 LQEMGREVVRQESSEYPNKRSRLWDHDEICDVLKNDKGTDAIRSICLNLSAI-RKLKLSP 628

Query: 479 YAFSKMPKLRFLRFYGDKN-KCMVSHLEGV-PF-AEVRHLEWPQCPLKTL--NICAEKLV 533
             F+KM  L+FL FYG  N  C+    +G+ PF  ++R+L W   PL++L     AEKLV
Sbjct: 629 DVFAKMTNLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPLESLPKKFSAEKLV 688

Query: 534 SLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLP 577
            L +  + VE+LW  VQ L +              L  F   I  ++++   C ML  + 
Sbjct: 689 ILDLSYSLVEKLWCGVQDLINLKEVTLSFSEDLKELPDFSKAINLKVLNIQRCYMLTSVH 748

Query: 578 ------DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
                 D+LEN+  L +    I  LP S G  S ++ L+L   + +E IP SI+ L++L 
Sbjct: 749 PSIFSLDKLENIVELDLSRCPINALPSSFGCQSKLETLVL-RGTQIESIPSSIKDLTRLR 807

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSM----------------- 672
            L IS C  L  LPELP +L  L   +C SL+ +  P+ ++                   
Sbjct: 808 KLDISDCSELLALPELPSSLETLLV-DCVSLKSVFFPSTVAEQLKENKKRIEFWNCFKLD 866

Query: 673 -SSVLYVNL---CNFLKLDPNELSEIVKDGWMKHSLYEE--RGIKKSMYFPGNEIPKWFR 726
             S++ + L    N ++     LS +  D    +  Y++     +    +PG+ +P+W  
Sbjct: 867 ERSLINIGLNLQINLMEFAYQHLSTLEHDKVESYVDYKDILDSYQAVYVYPGSSVPEWLE 926

Query: 727 HQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           +++  +   +   PP     + L+ F FC ++
Sbjct: 927 YKTTKNDMIVDLSPPH---LSPLLGFVFCFIL 955


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 290/786 (36%), Positives = 426/786 (54%), Gaps = 109/786 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NF+ HL+  L    I TF D ++L +G +I+  L   I+ S I II
Sbjct: 8   YDVFLSFRGEDTRKNFSDHLYTTLIANGIHTFRDSEELDKGGDIASELSRVIQKSRIFII 67

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YA+S+W                      FY V+PS VR QS S+G  FS   K  
Sbjct: 68  IFSRNYATSKWCLNELVKITERMTQKESTIHPVFYHVNPSEVRHQSGSYGEAFSNYEKDA 127

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E + +W+ ALT+  +LSG+  +  + ES+++  I ND+++RL+    +  K ++G+
Sbjct: 128 DLEKENIVKWRAALTQVGNLSGWHVDN-QYESEVLIGITNDIIRRLNREPLNVGKNIIGM 186

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              +E+++SL+ I S  VC + I GIGGI K TIA A++N IS  F GS F  NVRE  +
Sbjct: 187 SFHLEKLKSLMNIESNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRERSK 246

Query: 217 TGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDV----------- 259
              ++ LQ++LL  + +   ++  NIE  L    N L  KKV +V DDV           
Sbjct: 247 DNTLQ-LQQELLHGILRGKCLKVSNIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLAE 305

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                ++ S VIITTRDK+ L     +  Y +++L   ++ +LF +WAF  +    ++  
Sbjct: 306 EPEWFSTKSIVIITTRDKRFLTQYGKHVSYEVEKLNEEESIELFSRWAFKQNLPQEAYRN 365

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+   I+YA+G+PLALKVLG +  G+++  W+ A+ KLE IPH+EI+ VLKISYD L+D 
Sbjct: 366 LSYHIIEYAKGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNVLKISYDGLNDI 425

Query: 375 QKNVFLDIACFLEGEHRDEV------------ISIFDASKSLINLDLFYRIRMHDLLRDM 422
           +K +FLDIACF EGE ++ V            ISI    K LI + L  ++ MH+L++ M
Sbjct: 426 EKGIFLDIACFFEGEDKEVVSRILHNVSIECGISIL-HDKGLITI-LENKLEMHNLIQQM 483

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+E    PGK +RLW  +D+Y+VL KNTGTEAIEGI LD++  + +I   + AF 
Sbjct: 484 GHEIVRQECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDIS-ASEQIQFTTEAFK 542

Query: 483 KMPKLRFLRFY--------------GDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL 525
            M +LR L  +              GD+ +    HL     +P  E+  L W    L++L
Sbjct: 543 MMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSLESL 602

Query: 526 --NICAEKLVSLKMPCTKVEQLWD--------DVQRLPSSLCTFKTP-IT----FEII-- 568
             N  A+ LV L + C+ ++QL +         V  L  S+   K P IT     EI+  
Sbjct: 603 PSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEILIL 662

Query: 569 -DCKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIP-E 622
             C  L  LP ++  L+ L      +   +R  PE   R+  ++ L LS  ++L+ +P  
Sbjct: 663 EGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLS-ETDLKELPSS 721

Query: 623 SIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
           S +HL  LT L ++ C  L  +P+  C   +L  LS   C  L+KLP  L S+  +  ++
Sbjct: 722 STKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLS 781

Query: 680 LCNFLK 685
           L NFL+
Sbjct: 782 L-NFLR 786



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 28/167 (16%)

Query: 504  LEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI 563
            L G  F E+  +E   CPL   ++C          C K+E L       PS +C  K+  
Sbjct: 1140 LAGNEFYELPTIE---CPLALDSLCLRN-------CEKLESL-------PSDICKLKSLK 1182

Query: 564  TFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERI 620
            +     C  L+  P+    +ENL  L +  T I ELP S+  L  ++ L + +  NL  +
Sbjct: 1183 SLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSL 1242

Query: 621  PESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
            PESI +L+ L  L +  C +L  LPE   NLG L      SLE+L A
Sbjct: 1243 PESICNLTSLKVLVVDCCPKLYKLPE---NLGSLR-----SLEELYA 1281



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 23/220 (10%)

Query: 551  RLPS--SLCTFKTPITFEIIDCKMLER-LPDE---LENLEYLTVKGTTIRE--LPESLGR 602
            +LPS   LC+ +     +I +  + +R +P++   L +L+ L +    + E  +P  +  
Sbjct: 1290 QLPSLSGLCSLRI---LDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYN 1346

Query: 603  LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
            LS ++ L+L  N +   IP+ I  L+ L  L +SHC+ L  +PE   +L +L   +CTSL
Sbjct: 1347 LSSLQALLLGGN-HFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSL 1405

Query: 663  EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL--YEERGIKKSMYFP-GN 719
            E     LSS S++L   L    K    +L E+  D  ++  +  Y   GI  S+  P  +
Sbjct: 1406 ET----LSSPSNLLQSCLLKCFKSLIQDL-ELENDIPIEPHVAPYLNGGI--SIAIPRSS 1458

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             IP+W R+Q  GS    K  P      +  + FA  ++ V
Sbjct: 1459 GIPEWIRYQKEGSKVA-KKLPRNWYKNDDFLGFALFSIHV 1497



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 96/261 (36%), Gaps = 80/261 (30%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL-TVKGTTIR-ELP-----ESLGRLS 604
           +P S+C  ++        C  L++LP++LE+L  L ++    +R ELP      SL  LS
Sbjct: 743 VPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELPCLSGLSSLKELS 802

Query: 605 W----------------------------VKRLILSN-------------NSNLERIPES 623
                                        ++R ILSN              ++   IP  
Sbjct: 803 LDQSNITGEVIPNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELKLRGNHFSTIPAG 862

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC-TSLEKLP-AGLSSMSSVLYVNLC 681
           I  L +L  L +SHC++L  +PELP +L  L       +L   P + L    S +    C
Sbjct: 863 ISKLPRLRSLNLSHCKKLLQIPELPSSLRALDTHGSPVTLSSGPWSLLKCFKSAIQETDC 922

Query: 682 NFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRP 740
           NF K+                           ++ PG+  IPKW      GS A  +  P
Sbjct: 923 NFTKV---------------------------VFIPGDSGIPKWINGFQKGSYAE-RMLP 954

Query: 741 PRPAGYNKLISFAF-CAVVVF 760
                 N  + F+  CA V+ 
Sbjct: 955 QNWYQDNMFLGFSIGCAYVLL 975


>gi|255563210|ref|XP_002522608.1| conserved hypothetical protein [Ricinus communis]
 gi|223538084|gb|EEF39695.1| conserved hypothetical protein [Ricinus communis]
          Length = 840

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 245/622 (39%), Positives = 350/622 (56%), Gaps = 82/622 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR+ F SHL   LS K I TF D+ L RG+ IS +L  TI+ S ++++I
Sbjct: 13  YDVFLSFRGLDTRNGFVSHLFKALSEKQIITFKDENLDRGEQISDTLSQTIKESYVSVVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA S W                      FY +DP+ V++ + S+G      RK F 
Sbjct: 73  FSKNYACSAWCLDELVTILQCNKEMGQVVLPVFYEIDPTEVQELTGSYGNALMNHRKEFE 132

Query: 101 EKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK--NKGLVGVE 157
             + + W +AL E A ++GF S   +PESKLI+EIAN   ++L+  F     + GLVG+ 
Sbjct: 133 NCLVESWSHALMEIAAMAGFVSWNTKPESKLIDEIANRTWEKLNQAFPYDYCDDGLVGIN 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I++IE +LC+ S+ V  L IWG+GGI K T+A  +F +IS  F    F  NVRE  E 
Sbjct: 193 SCIKDIEQMLCLESKDVRILGIWGMGGIGKTTLARKIFERISSKFHSLCFVANVREKLEK 252

Query: 218 GGIKDLQKKLLSEL----SKDGNMRNIESQLNR---LARKKVRIVFDDV----------- 259
             +  LQ +++S+L      D  M    S       + RKK+ IV DDV           
Sbjct: 253 STLDFLQHEIISKLLGKEYSDHGMSIKISSSFIIKWIMRKKIFIVLDDVNDSEQINFLIG 312

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                + GSR+IIT+RDKQ+LKN  A+  Y +K+L Y +A +LF   AF G+    + +E
Sbjct: 313 TRDIYSPGSRIIITSRDKQILKNGDADI-YEVKKLNYHNAFQLFILHAFKGNPPAEALME 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +   A++Y +G+PLALKVLG  L  ++ E W+  ++KLE I   +I  VLKIS+D LD  
Sbjct: 372 VARVAVEYGRGIPLALKVLGSNLYNKNIEEWKDHLKKLEGISDKKIRNVLKISFDDLDKD 431

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +K +FLDIACF + E +D+V +I  +              KSLI +    +I MHDLL+ 
Sbjct: 432 EKEIFLDIACFFKSEEKDKVENILSSFGHSAIIGIRSLLDKSLITIS-NNKICMHDLLQQ 490

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNSYA 480
           MGR+IV +E + +P KR+RLW  +DIY VL K+ G   +IE ISLDM+K  R++ +N  A
Sbjct: 491 MGRDIVLQEGVKNPEKRSRLWIPQDIYHVLTKDLGKSISIESISLDMSK-GRDMELNCTA 549

Query: 481 FSKMPKLRFLRFYGDK---------------NKCMVSHLEGVPFAEVRHLEWPQCPLKT- 524
           F +M KL+FL+FY                  N  +  +   +P  E+R+L W + PLK+ 
Sbjct: 550 FERMNKLKFLKFYSPYYEQLQAEIDPPCKIFNISLSKNFSFLP-DELRYLYWHKYPLKSL 608

Query: 525 -LNICAEKLVSLKMPCTKVEQL 545
            L+ C + LV L + C+ V+QL
Sbjct: 609 PLSFCPDNLVQLHLICSHVQQL 630


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 277/739 (37%), Positives = 396/739 (53%), Gaps = 107/739 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+  L  K I TFIDD +L RG  IS +L+  IE S  +II
Sbjct: 71  YDVFLSFRGEDTRNNFTAHLYQELRTKGINTFIDDDKLERGRVISPALVTAIENSMFSII 130

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS+W                      FY VDPS VR     FG   +   K  
Sbjct: 131 VLSENYASSKWCLEELAKILECMKTRGQRVLPIFYNVDPSDVRNHRGKFGAALAEHEKNL 190

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E M+R   WK+ALT+ A+LSG++S   + E  LI+EI   VL +L        + LVG+
Sbjct: 191 TENMERVQIWKDALTQVANLSGWESRN-KNEPLLIKEIVKHVLNKLLNICSGDTEKLVGI 249

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+EI+  L + S+ V  + IWG+GGI K T+A A++N+ISR FE   F  +V +   
Sbjct: 250 DARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVLA 309

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             G+  LQ+  LS L   KD NM+ + S   RL  KKV +V D+V               
Sbjct: 310 NEGLIKLQQIFLSSLLEEKDLNMKGLTSIKARLHSKKVLVVLDNVNDPTIFECLIGNQDW 369

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IIT RDK ++ +      Y + +    +A++     +   + L    +EL+  
Sbjct: 370 FGRGSRIIITARDKCLISH--GVDYYEVPKFNSDEAYEFIKCHSLKHELLRGDFMELSTS 427

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I YAQG+PLALKVL   L   SKE   + + KL+   + +IEEVL+ISYD LDD +KN+
Sbjct: 428 MIGYAQGLPLALKVLRPILFSMSKEESRNQLDKLKSTLNKKIEEVLRISYDGLDDKEKNI 487

Query: 379 FLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMGREI 426
           FLDIACF +GE +D VI I D          +SLI+  L      + +MHDL+++MG EI
Sbjct: 488 FLDIACFFKGEDKDYVIEILDGCGFFPLCGIRSLIDKSLISIYGNKFQMHDLIQEMGLEI 547

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR++S+   GKR+RL  H+DIY VLKKNTG+E IEGI L++  +   I   + AF+ M K
Sbjct: 548 VRQQSLQELGKRSRLLFHEDIYDVLKKNTGSEKIEGIFLNLFHLQETIDFTTQAFAGMSK 607

Query: 487 LRFLRFYGDKN--------------KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           LR L+ Y                  K   S      + E+R+L+     LK+L  +  A+
Sbjct: 608 LRLLKVYQSDKISRNSEDTFMKENFKVRFSSNFKFCYDELRYLDLYGYSLKSLPNDFNAK 667

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENLEYLTVK 589
            LV L MPC+++EQLW  +                     K+LE+L   +L + +YL   
Sbjct: 668 NLVHLSMPCSRIEQLWKGI---------------------KVLEKLKRMDLSHSKYLI-- 704

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
                E P +L R++ ++RL+L +  +L ++  S+R L  L FL + +C+ L++LP  P 
Sbjct: 705 -----ETP-NLSRVTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPY 758

Query: 650 NLG---LLSARNCTSLEKL 665
           +L    +L    C+  E+ 
Sbjct: 759 DLKSLEILILSGCSKFEQF 777



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 34/149 (22%)

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
           +N   +P ++  LS+L  + + +C RLQ LP+LP ++GLL ARNCTSL+ + + L     
Sbjct: 882 NNFVTLP-NLSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKNVQSHLK---- 936

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
                            + +++   +   LY           PG+ +P W R++S G   
Sbjct: 937 -----------------NRVIRVLNLVLGLY--------TLTPGSRLPDWIRYKSSGMEV 971

Query: 735 TLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
            +   PP     N L    F   +V P F
Sbjct: 972 -IAELPPNWFNSNFL---GFWFAIVVPKF 996


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 275/760 (36%), Positives = 411/760 (54%), Gaps = 84/760 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGE+ R  F  HL+  L  K I TF DD+ L +G  IS  L+ +IE S IA+I
Sbjct: 18  YDVFLSFRGENVRKTFVDHLYLALEQKCINTFKDDEKLEKGKFISPELMSSIEESRIALI 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+S W                      FY VDPS VR+Q + FG  FS+   RF
Sbjct: 78  IFSKNYANSTWCLDELTKIIECKNVKGQIVVPVFYDVDPSTVRRQKNIFGEAFSKHEARF 137

Query: 100 PE-KMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVG 155
            E K+K+W+ AL EAA++SG+D  +     E+++IE+I  D++ RL +   + N + +VG
Sbjct: 138 EEDKVKKWRAALEEAANISGWDLPNTSNGHEARVIEKITEDIMVRLGSQRHASNARNVVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  + ++  +L IGS GV  L I G+ G+ K T+A  +++ I   FEG+ F   VR+  
Sbjct: 198 MESHMHQVYKMLGIGSGGVRFLGILGMSGVGKTTLARVIYDNIQSQFEGACFLHEVRDRS 257

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIES------QLNRLARKKVRIVFDDVT--------- 260
              G++ LQ+ LLSE+     +R  +S      Q  RL  KKV +V DDV          
Sbjct: 258 AKQGLEHLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+DK +L      K YRM  L   ++ +LF Q AF  +H      
Sbjct: 318 GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMGTLDKYESLQLFKQHAFKKNHSTKEFE 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+ + I++  G+PLALKVLG +L GR  + W S + +L+ IP  EI + L+ S+  L++
Sbjct: 378 DLSAQVIEHTGGLPLALKVLGSFLYGRGLDEWISEVERLKQIPQNEILKKLEPSFTGLNN 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            ++ +FLDIACF  G+ +D V  I ++              K LI + L  RI +H L++
Sbjct: 438 IEQKIFLDIACFFSGKKKDSVTRILESFHFSPVIGIKVLMEKCLITI-LKGRITIHQLIQ 496

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG  IVR+E+  +P   +RLW  +DI  VL++N  T+ IEG+SL +     E++    A
Sbjct: 497 EMGWHIVRREASYNPRICSRLWKREDICPVLEQNLCTDKIEGMSLHLTN-EEEVNFGGKA 555

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
             +M  LRFL+F   +N  +    E +P  E+R L+W   P K L  +   ++LVSLK+ 
Sbjct: 556 LMQMTSLRFLKF---RNAYVYQGPEFLP-DELRWLDWHGYPSKNLPNSFKGDQLVSLKLK 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            +++ QLW    +    L   K      +   + L R+PD     NLE L ++  T++ E
Sbjct: 612 KSRIIQLW----KTSKDLGKLK---YMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVE 664

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+G L  +  L L N  NL+ IP+ IR L KL  L +S C +L+T PE+   +  L+
Sbjct: 665 INFSIGDLGKLVLLNLKNCRNLKTIPKRIR-LEKLEVLVLSGCSKLRTFPEIEEKMNRLA 723

Query: 656 A--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
                 TSL +LPA + + S V  +NL  C  L+  P+ +
Sbjct: 724 ELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSI 763



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 129/313 (41%), Gaps = 57/313 (18%)

Query: 469  KVNR--EIHMNSYAFSKMP-KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
            K+NR  E+++ + + S++P  +      G  N     HLE +P +  R     +C LKTL
Sbjct: 718  KMNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRL----KC-LKTL 772

Query: 526  NICAEKLVSLKMPCTKVEQLWDD----------------VQRLPSSLCTFKTPITFEIID 569
            ++           C+K++ L DD                +Q +PSS+   K      +  
Sbjct: 773  DVSG---------CSKLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSG 823

Query: 570  CKMLERLP------------------DELENLEYLTVKGTTIRE--LPESLGRLSWVKRL 609
            C  L                        L +L  L +    I +  +  +LG L  +K L
Sbjct: 824  CNALSSQVSSSSHGQKSMGINFFQNLSGLCSLIKLDLSDCNISDGGILSNLGLLPSLKVL 883

Query: 610  ILSNNSNLERIPE-SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
            IL  N N   IP  SI  L++L  L +  C  L+ LP+LP ++  + A   TSL      
Sbjct: 884  ILDGN-NFSNIPAASISRLTRLKCLALHGCTSLEILPKLPPSIKGIYANESTSLMGFDQ- 941

Query: 669  LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE-ERGIKKSMYFPGNEIPKWFRH 727
            L+    +  V+L    +L  N+L   + D  +K  L       +  +Y PG EIP+WF +
Sbjct: 942  LTEFPMLSEVSLAKCHQLVKNKLHTSMADLLLKEMLEALYMNFRFCLYVPGMEIPEWFTY 1001

Query: 728  QSMGSSATLKTRP 740
            ++ G+ +     P
Sbjct: 1002 KNWGTESISVALP 1014


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 296/785 (37%), Positives = 427/785 (54%), Gaps = 106/785 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL+  L  KSI TF DD+ L RG+ ISQ LL  IE S  A++
Sbjct: 12  YHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLLAIEESLSAVL 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA+S W                      FY VDPS VR Q  SF   F +  ++F
Sbjct: 72  IISKNYANSAWCLDELVKILESKRLLGQQVFPVFYGVDPSDVRNQRGSFAEAFKKHEEKF 131

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E   K+++W++AL E A+LSG+DS   + E+KLIEE+   V KRL+  F S N GLV +
Sbjct: 132 SESKEKVQKWRDALREVANLSGWDSKD-QHETKLIEEVIAQVWKRLELKFPSYNDGLVAI 190

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--A 214
           +  +EE+ S L +G E V  + IWG+GGI K T+  A+F KI   F+ S F  NVRE   
Sbjct: 191 DVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFIANVREVSG 250

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQ-----LNRLARKKVRIVFDDVTS-------- 261
           E    ++ LQ K+LS L+  G +    SQ      N L+ KKV +V DDV+S        
Sbjct: 251 ERNQYLQQLQNKILSHLNIKGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSQLENLA 310

Query: 262 --------GSRVIITTRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   GSR+I+TTRDK +L  +    + Y  K L  +++  LFC+ AF  D      
Sbjct: 311 GSQEWFGRGSRIIVTTRDKHLLISHDVLFEMYESKILNKSESLHLFCEKAFKEDAPKEGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL++  ++YA+G+PLAL+VLG +LCGRS   WE A+ K++ +PH +I   L+ISYD L+
Sbjct: 371 VELSESVVEYARGLPLALEVLGSFLCGRSLSDWEDALIKIKQVPHDDILNKLRISYDMLE 430

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D  K +FLDIACF +G ++ +VI I ++              KSL+  D    I +HD+L
Sbjct: 431 DEHKTIFLDIACFFKGWYKHKVIQILESCGLHPTVGINVLIEKSLLTFD-GRVIWLHDML 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN-REIHMNS 478
            +M + IV +ES N PG+R+RLW  +DI QVLKKN GTE ++GI L  +     E H + 
Sbjct: 490 EEMAKTIVIQESPNDPGRRSRLWSLEDIDQVLKKNKGTEIVQGIVLKSSPSTLYEAHWDP 549

Query: 479 YAFSKMPKLRFLRFYGDKN-----KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
            AF+KM  LR L    D +     KC+ S L        + L W   PL +L   I  ++
Sbjct: 550 EAFTKMGNLRLLIILCDLHLSLGLKCLSSSL--------KVLVWWGYPLNSLPVGIQLDE 601

Query: 532 LVSLKMPCTKVEQLWD--------DVQRLPSSLCTFKTPITFEII--------DCKMLER 575
           LV L+M  +K++QLW+         V  L +S    +TP    I         DC  L  
Sbjct: 602 LVHLQMINSKIKQLWNGNEYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYFNDCIKLVE 661

Query: 576 LPDEL---ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
           +   +   + L  L++ G   ++  P+ L   S +K L LS  SN++R+P+  ++++ +T
Sbjct: 662 VHQSIRQHKKLRILSLMGCVDLKIFPKKLEMFS-LKMLFLSYCSNIKRLPDFGKNMTCIT 720

Query: 632 FLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMSSVLYVNLCN--FLKL 686
            L + +CE L +LP   CNL    +L+   C+ +  LP G++ + ++  ++L       L
Sbjct: 721 ELNLLNCENLLSLPNSICNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDL 780

Query: 687 DPNEL 691
           DP+ L
Sbjct: 781 DPSLL 785



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/240 (46%), Positives = 139/240 (57%), Gaps = 26/240 (10%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
            Y VFLSFRGEDTR  FT HL+  L  KSI TF DD +L RG+ ISQ LL  IE S  AI+
Sbjct: 1352 YHVFLSFRGEDTRLGFTDHLYASLVRKSIITFRDDEELARGEVISQKLLHAIEESLSAIV 1411

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            I S+ YA S W                      FY VDPS VR Q  SF   F +  ++F
Sbjct: 1412 IISKNYADSAWCLDELVKILESKRLLGQQVFPIFYGVDPSDVRNQRGSFAEAFKKHEEKF 1471

Query: 100  P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
                EK++RW++AL E A+ SG+DS   + E+KLIEE+   V KRL+  F S N GLV +
Sbjct: 1472 SESKEKVQRWRDALREVANFSGWDSKD-QHETKLIEEVIAQVWKRLELKFPSYNDGLVAI 1530

Query: 157  ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
            +  +EE+ S L +G E V  + IWG+GGI K T+  A+F KI   F+ S F  NVRE  E
Sbjct: 1531 DVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFITNVREGTE 1590



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 456  GTEAIEGISLDMNKVN-REIHMNSYAFSKMPKLRFLRFYGDKN-----KCMVSHLEGVPF 509
            GTE ++GI L  +     E H +  AFSKM  LR L    D +     KC+ S L+ VP 
Sbjct: 1588 GTELVQGIVLKSSPSTLYEAHWDPEAFSKMGNLRLLIILCDLHLSLGLKCLSSSLK-VPV 1646

Query: 510  AEVRHLEWPQCPLKTLNICAE--KLVSLKMPCTKVEQLWD 547
                   W   PL +L +  +  +LV+L+M  +KV+QLW+
Sbjct: 1647 -------WWGYPLNSLPVGVQLDELVNLQMINSKVKQLWN 1679


>gi|357468653|ref|XP_003604611.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505666|gb|AES86808.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1116

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 265/754 (35%), Positives = 403/754 (53%), Gaps = 85/754 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FTSHL   L    I  F DD  L RG  IS++LL  I+ S I+++
Sbjct: 64  YDVFLSFRGEDTRASFTSHLSTSLQSSGIIVFKDDHSLQRGHRISKTLLQAIQESRISVV 123

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S+W                      FY V PS VR Q+  FG+ F  L  R 
Sbjct: 124 VFSKNYADSQWCLQELMQIMECFRTTRQVVLPVFYDVHPSEVRSQTGDFGKAFQNLLNRV 183

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +     + +W++AL  AA ++GF     R ES++I++I  +V + LD T        VG
Sbjct: 184 LKVDEFMVPKWRDALRNAAGIAGFVVLNSRNESEVIKDIVENVARLLDKTDLFIADHPVG 243

Query: 156 VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           VE  ++++  LL    S  V  L +WG+GGI K TIA A++NKI R F+G  F  N+RE 
Sbjct: 244 VESRVQDMIQLLDTQLSNKVLLLGMWGMGGIGKTTIAKAIYNKIGRKFQGRSFLANIREV 303

Query: 215 -EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVTS------ 261
            E+  G  +LQ++L+ ++ K+    ++NIE+      +RL  K+V IV DDV        
Sbjct: 304 WEKDYGQVNLQEQLMYDIFKETTSKIQNIEAGKYILKDRLCHKRVLIVLDDVNKLDQLNI 363

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTRDK +L+    +K Y MKE+  +++ +LF   AF        
Sbjct: 364 LCGSRKWFAPGSRIIITTRDKHILRRDRVDKTYSMKEMDESESLELFSLHAFKQTSPTED 423

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             E++   +KY+ G+PLAL+VLG YL  R    W   + KL+IIP+ ++ + LKISYD L
Sbjct: 424 FSEISRNVVKYSGGLPLALEVLGSYLFDREILEWICVLEKLKIIPNDQVHKKLKISYDGL 483

Query: 372 -DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
            DD++K++FLDIACF  G  R++VI I +               +SL+ +D   ++ MHD
Sbjct: 484 NDDTEKSIFLDIACFFIGMDRNDVIQILNGCGLFAEIGISVLVERSLVTVDGKNKLGMHD 543

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGREI+R++S   P +R+RLW H+D+  VL ++TGT+ +EG++L +   + +   +
Sbjct: 544 LLRDMGREIIREKSPMEPEERSRLWFHEDVLDVLSEHTGTKTVEGLTLKLPGRSAQ-RFS 602

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           + AF KM KLR L+  G +      +L      ++R L W   PL  +        +VS+
Sbjct: 603 TKAFKKMKKLRLLQLSGAQLDGDFKYLS----RKLRWLHWNGFPLTCIPSKFRQRNIVSI 658

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT- 592
           ++  + V+ +W  +QR+       +      +     L + PD   L NLE L +K    
Sbjct: 659 ELENSNVKLVWQQMQRM-------EQLKILNLSHSHYLTQTPDFSYLPNLENLVLKDCPR 711

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPC 649
           + E+  ++G L  V  + L +  +L  +P +I  L  L  L +S C ++  L    E   
Sbjct: 712 LSEVSHTIGHLKKVLLINLKDCISLCNLPRNIYTLKSLKTLILSGCLKIDKLEEDLEQME 771

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           +L  L A N T + K+P  +    S+ Y++LC +
Sbjct: 772 SLTTLMADN-TGITKVPFSVVKSKSIGYISLCGY 804


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 315/949 (33%), Positives = 473/949 (49%), Gaps = 157/949 (16%)

Query: 8   FRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERY 66
           FRG+DTR+NFTSHL+  L+ + I  F+DD +L RG  I  +L   IE S  ++IIFS  Y
Sbjct: 70  FRGKDTRNNFTSHLYSNLAQRGIDVFMDDRELERGKTIEPALWKAIEESRFSVIIFSRDY 129

Query: 67  ASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR 105
           ASS W                      FY VDPS   +++  F  H    ++   EK++ 
Sbjct: 130 ASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSETYEKA--FVEHEQNFKENL-EKVRI 186

Query: 106 WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIES 165
           WK+ L+   +LSG+D    R ES+ I+ I   +  +L  T  + +K LVG++  +E +  
Sbjct: 187 WKDCLSTVTNLSGWDVRN-RNESESIKIIVEYISYKLSITLPTISKNLVGIDSRLEVLNG 245

Query: 166 LLCIGSE-------GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
              IG E       G+C     G+GG+ K T+A  V+++I   FEGS F  NVRE   E 
Sbjct: 246 Y--IGEEVGEAIFIGIC-----GMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVFAEK 298

Query: 218 GGIKDLQKKLLSEL-----SKDGNMRNIESQLNRLARKKVRIVFDDVTS----------- 261
            G + LQ++LLSE+     S   + R IE    R  RKK+ +V DDV             
Sbjct: 299 DGPRRLQEQLLSEILMERASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESLAAES 358

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+IIT+RDKQVL      + Y  ++L   DA  LF Q AF  D      ++L+
Sbjct: 359 KWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALMLFSQKAFENDQPAEDFLDLS 418

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            + + YA G+PLAL+V+G +L GRS   W  A+ ++  IP  EI +VL +S+D L + +K
Sbjct: 419 KQVVGYANGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDHEIIKVLLVSFDGLHELEK 478

Query: 377 NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
            +FLDIACFL+G   D +  I D               +SLI++    ++ MH+LL+ MG
Sbjct: 479 KIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSR-DQVWMHNLLQKMG 537

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EI+R+ES   PG+R+RLW +KD+   L  N G E IE I LDM  + +E   N  AFSK
Sbjct: 538 KEIIRRESPEEPGRRSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGI-KEAQWNMEAFSK 596

Query: 484 MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK 541
           M +LR L+     N   +S        ++R LEW   P K+L  ++  ++LV L M  + 
Sbjct: 597 MSRLRLLKI----NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMANSS 652

Query: 542 VEQLWDDVQ--------RLPSSLCTFKTPITFEIID--------CKMLERLPDEL---EN 582
           +EQLW   +         L +SL   KTP    I +        C  L  +   L   + 
Sbjct: 653 IEQLWYGCKSAINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLSEVHPSLALHKK 712

Query: 583 LEYLT-VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           L+++  V   +IR LP +L  +  +K   L   S LE+ P+ I +++ L  L +      
Sbjct: 713 LQHVNLVNCKSIRILPNNL-EMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDET--- 768

Query: 642 QTLPELPCN------LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSE 693
            ++ +LP +      LGLLS  +C +LE +P+ +  + S+  ++L  C+ LK  P  L +
Sbjct: 769 -SITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPENLGK 827

Query: 694 IVKDGWMKHSLYEERGIKK-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
           +        SL E  G+        +  PGNEIP WF H+S GSS +++     P+G   
Sbjct: 828 V-------ESLEEFDGLSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQV----PSGRMG 876

Query: 749 LIS-FAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE 807
             +  AF A    P+   +F+  +G +++      +C ++    EGHL+           
Sbjct: 877 FFACVAFNANDESPSLFCHFK-ANGRENYPS---PMCINF----EGHLF----------- 917

Query: 808 SDHVFLGCNSFG--GEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGI 854
           SDH++L   SF    E     ++ FS  I  SFH   Y +  +V  CG+
Sbjct: 918 SDHIWLFYLSFDYLKELQEWQHESFS-NIELSFH--SYEQGVKVNNCGV 963


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 288/798 (36%), Positives = 412/798 (51%), Gaps = 140/798 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL   L  K I TF DD+ L RG NIS+ L+  I+ S  AI 
Sbjct: 26  YHVFLSFRGEDTRKGFTDHLRAALERKGITTFRDDKDLERGKNISEKLINAIKDSMFAIT 85

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S  YASS W                      FY VDPS VR Q  SF   F +  ++F
Sbjct: 86  IISPDYASSTWCLDELQMIMECSSNNNLHVLPVFYGVDPSDVRHQRGSFEEAFRKHLEKF 145

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               ++++RW+NA+ + A  SG+DS   + E+ L+E IA  + ++L     S  + LVG+
Sbjct: 146 GQNSDRVERWRNAMNKVAGYSGWDSKG-QHEALLVESIAQHIHRKLVPKLSSCTENLVGI 204

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           E  +EE+  L+ +G   V  + IWG+GGI K TIA AV+  I   F+ + F  NVRE  E
Sbjct: 205 ESKVEEVNKLIGMGLNDVRFIGIWGMGGIGKSTIARAVYEAIRCEFQLTCFLENVREISE 264

Query: 217 TGGIKDLQKKLLSELSKDGN-MRNI----ESQLNRLARKKVRIVFDDVTS---------- 261
           T G+  LQ++LLS +S   N   N+    ++  N   RKKV +V DDV            
Sbjct: 265 TNGLVHLQRQLLSHMSISRNDFHNLYDGKKTIQNSFRRKKVLLVLDDVNELNQLENMAGK 324

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSRVIITTRDK +L     +K Y +  L   +A  LFC  AF GD     +++L
Sbjct: 325 QDWFGPGSRVIITTRDKHLLMTHGVHKTYEVWMLFQNEALNLFCLKAFKGDKPQEGYLDL 384

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + + + Y  G+PLAL+V G YL GR+ ++W SA++K+  +P  +I++ L+ISY+SLD  +
Sbjct: 385 SKEVVDYTGGLPLALEVFGSYLYGRNVDLWHSAIKKIRSVPLRKIQDKLEISYESLDPME 444

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD-LFYRIRMHDLLRD 421
           K+VFLDIACF +G   D+VI I +               +SLI LD +  ++ MHDLL++
Sbjct: 445 KDVFLDIACFFKGMKIDKVIDILENCGYFPKIIIQVLIDRSLITLDRVNNKLGMHDLLQE 504

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR IV +ES N PG+ +RLW  +DI  VL KN GTE I  + L++ +   E   ++ AF
Sbjct: 505 MGRNIVFQESPNDPGRCSRLWSKEDIDSVLTKNKGTEKISSVVLNLLQ-PYEARWSTEAF 563

Query: 482 SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKMPC 539
           SK  +L+ L     +    +S L       ++ L W  CPLKTL    +  ++V +K+  
Sbjct: 564 SKTSQLKLLNLNEVQLPLGLSCLP----CSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSH 619

Query: 540 TKVEQLWDDV-----------------QRLPS------------SLCTFKTPITFEII-- 568
           +K+E+LW  V                 +RLP               C+  T +   ++  
Sbjct: 620 SKIEKLWHGVYFMEKLKYLNLKFSKNLKRLPDFSGVPNLEKLILKGCSILTEVHLSLVHH 679

Query: 569 ---------DCKMLERLP--------------------------DELENLEYLTVKGTTI 593
                    +CK L+ LP                          +++ENL  L +KGT I
Sbjct: 680 KKVVVVSLKNCKSLKSLPGKLEMSSLKKLILSGCSEFKFLPEFGEKMENLSILALKGTDI 739

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP----ELPC 649
           R+LP SLG L  +  L L +  +L  +P++I  L+ L  L IS C RL  LP    E+ C
Sbjct: 740 RKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRLPDGLKEIQC 799

Query: 650 NLGLLSARNCTSLEKLPA 667
            L  L A N T++++LP+
Sbjct: 800 -LKELHA-NDTAIDELPS 815



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 84/194 (43%), Gaps = 34/194 (17%)

Query: 575  RLPDE---LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
            RLP     L +L+YL +    + E  +P     LS +K L L+ N N   IP SI  LS+
Sbjct: 858  RLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSLKSLDLTGN-NFVIIPSSISKLSR 916

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
            L FL ++ CE+LQ LPELP  +  L A NC SLE                     K DP 
Sbjct: 917  LRFLCLNWCEQLQLLPELPSRIMQLDASNCDSLET-------------------RKFDPI 957

Query: 690  ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
            E        +MK            + FPG+EIP W   Q  GS +  K   P     ++ 
Sbjct: 958  E-------SFMKGRCLPATRFDMLIPFPGDEIPSWCVSQ--GSVSWAKVHIPNNLPQDEW 1008

Query: 750  ISFAFCAVVVFPAF 763
            + FA C  +V   F
Sbjct: 1009 VGFALCFQLVSYTF 1022


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 273/772 (35%), Positives = 415/772 (53%), Gaps = 92/772 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRG DTR+ FT HL+  L  K I+TFIDD +L RG++IS +L  TIE S  +I+
Sbjct: 11  FDVFLSFRGTDTRNTFTGHLNTALKSKGIRTFIDDKELRRGEDISSTLFTTIEKSRCSIV 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YA+S+W                      FY VDPS VR Q  SFG+     +K  
Sbjct: 71  VLSEAYATSKWCLEELVKILECKRTIKQRVVPIFYHVDPSDVRGQGGSFGQAMDAHKKNL 130

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               ++++RW  ALTE  +LSG+D    + E++LI++I  D+ K L+    +  + LVGV
Sbjct: 131 KIEEKQLQRWSAALTEVGNLSGWDLGN-KSEAQLIQDIVADISKYLNCASSNDAQNLVGV 189

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+E+ESLLC  S  V  + I G+ GI K  +A +++ + S  FEG  F  NV   E 
Sbjct: 190 DSCIKELESLLCFESTDVRMIGICGMSGIGKTALARSIYEQFSDKFEGCCFLTNVGNVER 249

Query: 217 TGGIKDLQKKLLSELSKDGNMR-NIESQLNRLARKKVRIVFDDVT--------------- 260
            G     +K+LLS + KD ++   I S   RL  KKV IV D+V+               
Sbjct: 250 EG-TDYWKKELLSSVLKDNDIDVTITSIKTRLGSKKVLIVVDNVSHQLTMKTLIGKHDWF 308

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
              SR+IITTR+K+ L     +  Y +++L    A +LF   AF  DH   S    + + 
Sbjct: 309 GPQSRIIITTRNKRFLSG--MDAVYEVQKLQDDKAIELFNHCAFRKDHPAESFKRFSLRF 366

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YAQG+PLAL+VLG  L  + ++ W+S + +LE     EI  VL+ S+D L+D++K++F
Sbjct: 367 IAYAQGLPLALEVLGSSLYKKDQDYWKSKLDELEKTLDNEIHGVLQKSFDELNDNEKDIF 426

Query: 380 LDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMGREIV 427
           LDIACF +  ++D ++ I ++         ++LI+  L      ++ MHDLL+ MG +IV
Sbjct: 427 LDIACFFKCSNKDHIMKILESCNLFPGSGIENLIDRFLITISCEKLEMHDLLQKMGWKIV 486

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
            + S   PGKR+RLW   DI  VL+KNTGT+ ++GI L++  + +EIH  + AF++M +L
Sbjct: 487 TQTS-KEPGKRSRLWMQDDICHVLEKNTGTKEVKGIFLNLFGL-KEIHFTTEAFARMNRL 544

Query: 488 RFLRFYGD-------------KNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAE 530
           R L  Y               K KC V   +   F   E+R+L W + PL+TL  +   +
Sbjct: 545 RLLEVYESNLSDDSDSESTSRKRKCKVRFSDDFKFHSDELRYLYWHEYPLQTLPSHFKPK 604

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L MP +++ + W   Q     +C  +     ++ + K L   PD   + NLE L +
Sbjct: 605 NLVCLCMPYSQITEPWKGSQ-----VC--ENLKFLDLSNSKFLMETPDFSRITNLEELVL 657

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
            G T +  L  SLGRL  +  L +SN   L   P +I  L  L  L +S C  LQ  P++
Sbjct: 658 DGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFP-AIYKLVSLQTLDLSGCSNLQKFPDI 716

Query: 648 PCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
             ++  LS    + T++ ++PA ++  S ++ ++L  C  LK  P+ + ++ 
Sbjct: 717 SQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLT 768



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 167/397 (42%), Positives = 228/397 (57%), Gaps = 47/397 (11%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
            Y VFLSFRGEDTR+NFTSHL+  L  K I+TF+DD+ +R G+ IS  L+G I+ S  +II
Sbjct: 1405 YAVFLSFRGEDTRNNFTSHLYKALDQKGIETFMDDKKLRTGEEISPILVGAIQRSRCSII 1464

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + SE YASS+W                      FY VDPSHVR Q+ SFG   S+  +  
Sbjct: 1465 VLSENYASSKWCLEELVEILECKRTKNQRVVPIFYNVDPSHVRNQTGSFGEALSKHEENL 1524

Query: 100  P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVG 155
                EK+++W+ ALT+ A+LSG  S + +PE+ LIEEI  D+ K L+    SK+   LVG
Sbjct: 1525 KIKGEKLRKWREALTQVANLSGLHS-LNKPEALLIEEICVDISKGLNFVSSSKDTQILVG 1583

Query: 156  VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
            V+ S+ E+ESLLC+ S  V  + IWG+GGI K T+A A++ KIS  FEGS F  NV +  
Sbjct: 1584 VDSSVRELESLLCLESNDVHMIGIWGMGGIGKTTLARAIYEKISDKFEGSCFLANVGDLA 1643

Query: 216  ETGGIKDLQKKLLSELSKDGNMR-NIESQLNRLARKKVRIVFDDVT-------------- 260
            + G    L+ +LLS + +D N+   I S   RL  KKV IV D+V               
Sbjct: 1644 KEGE-DYLKDQLLSRVLRDKNIDVTITSLKARLHSKKVLIVLDNVNHQSILKNLAGESNW 1702

Query: 261  --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
                SR+IITTRDKQ+L        + +++L    A +LF  +AF  +   +  +EL   
Sbjct: 1703 FGPQSRIIITTRDKQLLTMHGVKDIHEVQKLQDNKAIELFNHYAFRNEPPSSDVMELIHH 1762

Query: 319  AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
             I YAQG+PLAL+VLG   C +SK+ W      +E+I
Sbjct: 1763 VIAYAQGLPLALEVLGSSFCNKSKDEW--GTEDIEVI 1797



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 93/166 (56%), Gaps = 26/166 (15%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
            YDVFLSFRGEDTR  F +HL+  L  K + TF DD  I RG++IS +L+  IE S  +II
Sbjct: 1218 YDVFLSFRGEDTRFTFAAHLYEALDRKGVNTFFDDHKIRRGESISPTLVRAIEGSRSSII 1277

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            I S+ YASS W                      FY VDPS VRK   SFG+   +  K  
Sbjct: 1278 ILSQNYASSTWCLEELVKILECRKTMGQLVLPVFYNVDPSDVRKHKQSFGKALVKHEKTL 1337

Query: 100  PEKM---KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL 142
             + M   K W+ AL+E A+L+G++S   + E   IEEI  DVLKRL
Sbjct: 1338 KQNMDKVKNWREALSEVANLAGWNSQN-KSEPTFIEEIVIDVLKRL 1382



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 211/488 (43%), Gaps = 99/488 (20%)

Query: 449  QVLKKNTGTEAIEGIS-LDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKC----MVSH 503
            Q+ +   G++  E +  LD++  N +  M +  FS++  L  L   G  N C     +  
Sbjct: 615  QITEPWKGSQVCENLKFLDLS--NSKFLMETPDFSRITNLEELVLDGCTNLCHLHSSLGR 672

Query: 504  LEGVPFAEVRHL----EWPQ----CPLKTLNICA----EKL--VSLKMPCTKVEQLWDD- 548
            L  + F  V +     ++P       L+TL++      +K   +S  MPC  + +L+ D 
Sbjct: 673  LRKLAFLSVSNCIKLRDFPAIYKLVSLQTLDLSGCSNLQKFPDISQHMPC--LSKLYLDG 730

Query: 549  --VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT----IRELPES 599
              +  +P+S+      +  ++ +CK L+ LP    +L  L  LT+ G +     ++   +
Sbjct: 731  TAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNSGN 790

Query: 600  LGRLSWVKRL-----------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            L RLS  KRL           +  + +    +P   + LS L+ L +  C RLQTLP LP
Sbjct: 791  LDRLSG-KRLSHLGILSSLKSLNLSGNRFIHLPCIFKGLSNLSRLDLHDCRRLQTLPLLP 849

Query: 649  CNLGLLSARNCTSLEK-LPAGL-SSMSSVLYVNLCNFLK----LDP---NELSEIVKDGW 699
             ++ +L+A NCTSLE  LP  +  S    L+ N    +K    ++P   +  + + ++ W
Sbjct: 850  PSVRILNASNCTSLESILPESVFMSFRGCLFGNCLRLMKYPSTMEPHIRSMATHVDQERW 909

Query: 700  MKHSLYEER-----GIKKSMYFPGNEIPKWFRHQSMGSSATLKTR----PPRPAGYNKLI 750
               S Y+E      GI  S   PG+ IP WFR +  G    ++         P   N  +
Sbjct: 910  --RSTYDEEYPSFAGIPFSNVVPGSGIPDWFRDRREGHDINIEVHQNWYSSTPGSNNNFL 967

Query: 751  SFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE-----GHLYSWFLGKI-- 803
              A  AVV            + +D + G  +   CD   +++      H+ S+  G+   
Sbjct: 968  GLALSAVV------------APQDGFLGRGWYPYCDLYTQNDPKSESSHICSFTDGRTYQ 1015

Query: 804  ---SYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE--VKKCGIHFVY 858
               + +ESDH++L         + P++  FS        F  +   GE  VK CG+  VY
Sbjct: 1016 LEHTPIESDHLWLA--------YVPSFFSFSCEKWSCIKF-SFGTSGECVVKSCGVCPVY 1066

Query: 859  AQDSA-DH 865
             +D+  DH
Sbjct: 1067 IKDTTNDH 1074



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 49/318 (15%)

Query: 456  GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHL 515
            GTE IE I L++  + +EI   + AF+KM KLR L    +   C  + +           
Sbjct: 1790 GTEDIEVIVLNLTGL-KEIRFTTAAFAKMTKLRMLIIISE---CSANQM----------- 1834

Query: 516  EWPQCPLKTLNICAEKLVSLKMPCTKVEQL-WDDVQRLPSSLCTFKTPITFEIIDCKMLE 574
               QC  K   +    ++S  MPC +   L    +  LPSS+      +  ++ +C+ L 
Sbjct: 1835 ---QCCSK---LEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLL 1888

Query: 575  RLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
             LP         ++   T+ E     G L   K  +  N+ NL+ +P+++  L  L  L 
Sbjct: 1889 SLPS--------SISKLTLLETLSLSGCLDLGKCQV--NSGNLDALPQTLDRLCSLRRLE 1938

Query: 635  ISHCERLQTLPELPCNLGLLSARNCTSLEKL-PAGLSSMSSVLYVNLCNFLKLDPNEL-- 691
            + +C  L +LP LP ++ L++A NC SLE + P  +           C  L   P+ +  
Sbjct: 1939 LQNCSGLPSLPALPSSVELINASNCKSLEDISPQSVFLCFGGSIFGNCFKLSKYPSTMER 1998

Query: 692  ------SEIVKDGWMKHSLYEERG----IKKSMYFPGNEIPKWFRHQSMGSSATLKTRPP 741
                  +   ++ W   S +E++     +  S  FPG+ IP WF+H+S G    +K  P 
Sbjct: 1999 DLQRMAAHANQERWW--STFEQQNPNVQVPFSTVFPGSRIPDWFKHRSQGHEINIKVSPN 2056

Query: 742  RPAGYNKLISFAFCAVVV 759
                 +  + FA  AV+ 
Sbjct: 2057 WYT--SNFLGFALSAVIA 2072


>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1258

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 273/770 (35%), Positives = 400/770 (51%), Gaps = 103/770 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VF+SFRGEDTR +FTSHL+  L    I  F DD+ L RG +IS SLL  IE S I+++
Sbjct: 175 YEVFISFRGEDTRSSFTSHLYAALQNAGIIVFKDDESLPRGHHISDSLLLAIEQSQISVV 234

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA SRW                      FY VDPS VR Q+  FG  F  L  R 
Sbjct: 235 VFSRNYADSRWCLKELERIMECHRTIGHVVVPVFYDVDPSEVRHQTSHFGNAFQNLLNRM 294

Query: 100 P---------EKM---------KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR 141
                     E M         K W+ AL EAA +SG      R ES+ I+ I  +V + 
Sbjct: 295 SIDLNSSGEMEMMLNNETNLHGKSWREALREAASISGVVVLDSRNESEAIKNIVENVTRL 354

Query: 142 LDATFQSKNKGLVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISR 200
           LD T        VGVE  ++++  LL    S  V  L IWG+GGI K TIA A+FNKI R
Sbjct: 355 LDKTELFIADNPVGVESRVQDMIQLLDQKLSNDVELLGIWGMGGIGKTTIAKAIFNKIGR 414

Query: 201 HFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVR 253
           +FEG  F   +REA E+  G   LQ++LL ++ K+   +  NIE   N    RL  KKV 
Sbjct: 415 NFEGRSFLAQIREAWEQDAGQVHLQEQLLFDIDKESKTKIPNIELGKNILKERLRHKKVL 474

Query: 254 IVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
           ++ DDV                 SGSR+IITTRD  +L+    +K Y MKE+   ++ +L
Sbjct: 475 LILDDVNKLHQLNALCGNREWFGSGSRIIITTRDMHILRGRRVDKVYTMKEMNEDESIEL 534

Query: 298 FCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPH 357
           F   AF          EL+   I Y+ G+PLAL+VLG YL       W+  + KL+ IP+
Sbjct: 535 FSWHAFKQPSPREDFTELSRNVIAYSGGLPLALEVLGSYLFDMEVTEWKCVLEKLKKIPN 594

Query: 358 VEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KS 403
            E++E LKIS+D L DD+++ +FLDIACF  G  R++VI I + S             +S
Sbjct: 595 DEVQEKLKISFDGLNDDTEREIFLDIACFFIGMDRNDVIHILNGSELYAENGIRVLVERS 654

Query: 404 LINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGI 463
           L+ +D   ++ MHDLLRDMGREI+R +S   P +R+RLW H+D+  VL K +GT+A+EG+
Sbjct: 655 LVTVDKKNKLGMHDLLRDMGREIIRVKSPKEPEERSRLWFHEDVLDVLLKESGTKAVEGL 714

Query: 464 SLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK 523
           +L + + N +  +++ +F KM KLR L+F G +      +L      ++R L W   P K
Sbjct: 715 TLMLPRSNTKC-LSTTSFKKMKKLRLLQFAGVELAGDFKNLS----RDLRWLYWDGFPFK 769

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE 581
            +  ++    LVS+++  + +  +W +      +L   K  I   +     L + PD   
Sbjct: 770 CIPADLYQGSLVSIELENSNISHMWKE------ALLMEKLKI-LNLSHSHYLTQTPD-FS 821

Query: 582 NLEYLT----VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
           NL YL     +    + E+  ++G L  +  + L +  +L  +P SI +L  L  L +S 
Sbjct: 822 NLPYLEKLILIDCPRLFEVSHTIGHLRDIVLINLEDCVSLRNLPRSIYNLKSLKTLILSG 881

Query: 638 CERLQTLPE----LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           C  +  L E    +     L++ R  T++ ++P  +   +S+ Y++LC +
Sbjct: 882 CLMIDKLEEDLEQMKSLTTLIADR--TAITRVPFSVVRSNSIGYISLCGY 929


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 410/761 (53%), Gaps = 84/761 (11%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRGEDTR  FT HL   L  + IKTF DD  L RG+ IS  L   IE S  AIII 
Sbjct: 26  VFLSFRGEDTRQGFTDHLFASLERRGIKTFKDDHDLERGEVISYELNKAIEESMFAIIIL 85

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S  YASS W                      FY VDPS VR Q  SF   F +  ++F +
Sbjct: 86  SPNYASSTWCLDELKKIVECSKSFGQAVFPIFYGVDPSDVRHQRGSFDEAFRKHEEKFRK 145

Query: 102 ---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              K++RW++AL E A  SG+DS   R E+ L+E I   + K+L    +     LVG++ 
Sbjct: 146 DRTKVERWRDALREVAGYSGWDSKG-RHEASLVETIVEHIQKKLIPKLKVCTDNLVGIDS 204

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
            I+E+ SLL +    V  + IWG+GGI K TIA  V+  I   F+ S F  N+RE   +T
Sbjct: 205 RIKEVYSLLAMDLNNVRFIGIWGMGGIGKTTIARLVYEAIKNEFKVSCFLANIRETVSKT 264

Query: 218 GGIKDLQKKLLSELS-KDGNMRNIESQ----LNRLARKKVRIVFDDVTS----------- 261
             +  +Q +LLS L+ +  +  N+        N    KKV +V DDV+            
Sbjct: 265 DNLAHIQMELLSHLNIRSNDFYNVHDGKKILANSFNNKKVLLVLDDVSELSQLENLAGKQ 324

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSRVIIT+RDK +L     ++ Y+ K LV  +A KLFC  AF        ++ L 
Sbjct: 325 EWFGPGSRVIITSRDKHLLMTHGVHETYKAKGLVKNEALKLFCLKAFKEIQPKEEYLSLC 384

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            + ++Y +G+PLAL+VLG +L GR+ EVW SA+ ++   PH +I + LKISYDSL   +K
Sbjct: 385 KEVVEYTRGLPLALEVLGSHLHGRTVEVWHSALEQIRSGPHYKIHDTLKISYDSLQSMEK 444

Query: 377 NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLF-YRIRMHDLLRDM 422
           N+FLDIACF +G   DEVI I +               +SL  LD    ++ MHDLL++M
Sbjct: 445 NLFLDIACFFKGMDIDEVIEILEGCGYHPKIGIDILIERSLATLDRGDNKLWMHDLLQEM 504

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR IV +ES N PGKR+RLW  KD+ QVL++N GT+ I+GI++D+ +   E      AFS
Sbjct: 505 GRNIVFEESPNDPGKRSRLWSQKDVDQVLRQNKGTDKIQGIAMDLVQ-PYEASWKIEAFS 563

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKMPCT 540
           K+ +LR L+    K   +   L   P + +R L+W  CPL+TL +     ++V++K+  +
Sbjct: 564 KISQLRLLKLCEIK---LPLGLNRFP-SSLRVLDWSGCPLRTLPLTNHLVEIVAIKLYRS 619

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELP 597
           K+EQLW   Q L       +   +  +   K L+R PD   + NLE+L ++G T++ E+ 
Sbjct: 620 KIEQLWHGTQFL-------ENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIH 672

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
            SL     +  L L +   L+ +P  I  +S L  L +S C   + LPE    +  LS  
Sbjct: 673 PSLLSHKKLALLNLKDCKRLKTLPCKIE-MSSLKGLSLSGCCEFKHLPEFDETMENLSKL 731

Query: 658 NC--TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           +   T+++KLP+ L  + S+L ++L  C  L   PN +SE+
Sbjct: 732 SLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSEL 772



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 85/192 (44%), Gaps = 19/192 (9%)

Query: 575  RLPDEL--ENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
            RLP +L   +L  L +    + E  +P+    LS +  L LS N N  R P SI  L KL
Sbjct: 859  RLPPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGN-NFVRPPSSISKLPKL 917

Query: 631  TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE 690
             +L ++ CE LQ  PE P ++ LL A NC SLE     LS   S+    +     L P  
Sbjct: 918  EYLRLNCCEMLQKFPEFPSSMRLLDASNCASLETSKFNLSRPCSLFASQIQRHSHL-PRL 976

Query: 691  LSEIVKDGWMKHSLYEERGIKKS---MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN 747
            L   V+         +E G+ K+   M   G+EIP WF      S   +    P      
Sbjct: 977  LKSYVE--------AQEHGLPKARFDMLITGSEIPSWFTPSKYVSVTNMSV--PHNCPPT 1026

Query: 748  KLISFAFCAVVV 759
            + + FA C ++V
Sbjct: 1027 EWMGFALCFMLV 1038



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 42/223 (18%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT-IRELPESLGRLS 604
           +++LPSSL    + ++ ++ +CK L  LP+   EL++L  L V G + +   PE L  + 
Sbjct: 738 IKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMK 797

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT-------LP------------ 645
            ++ L  +N +++E +P S+  L  L  +  + C+   T       LP            
Sbjct: 798 SLEEL-FANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLPFTQFLGTPQEPN 856

Query: 646 --ELPCNLGLLSARNCT------SLEKLPAGLSSMSSVLYVNLC--NFLKLDPNELSEIV 695
              LP  L L S RN        S E +P   S++SS++ +NL   NF++  P+ +S++ 
Sbjct: 857 GFRLPPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGNNFVR-PPSSISKLP 915

Query: 696 KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKT 738
           K  +++ +  E   ++K   FP  E P   R     + A+L+T
Sbjct: 916 KLEYLRLNCCE--MLQK---FP--EFPSSMRLLDASNCASLET 951


>gi|356506778|ref|XP_003522153.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1161

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 276/789 (34%), Positives = 409/789 (51%), Gaps = 122/789 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +Y+VFLSFRGEDTR +FTSHL+  L    I  F DD+ L+RGD I+ SL   IE S I++
Sbjct: 60  IYEVFLSFRGEDTRASFTSHLYTALLNAGIIVFKDDESLLRGDQIAPSLRLAIEQSRISV 119

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++FS  YA SRW                      FY VDPS VR Q+  FGR F +L  R
Sbjct: 120 VVFSRNYAESRWCLDELEKIMECHRTIGQVVVPVFYDVDPSEVRHQTGEFGRTFEKLSDR 179

Query: 99  ----------------------------------------FPEKMKRWKNALTEAADLSG 118
                                                   +   ++ WK AL EAA +SG
Sbjct: 180 ILKEKQEVVPGWQDSKKNMLSRWKELRSTIRSSERWKELLWKTTVQSWKEALREAAGISG 239

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEG-VCKL 177
                 R ES+ I+ I  +V   LD          VGVE  ++E+  LL + S   V  L
Sbjct: 240 VVVLNSRNESEAIKSIVENVTHLLDKRELFVADNPVGVEPRVQEMIQLLDLKSSNHVLLL 299

Query: 178 RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--AEETGGIKDLQKKLLSELSKDG 235
            +WG+GGI K T A A++NKI R+FEG  F  ++RE   ++TG I  LQK++L ++ K  
Sbjct: 300 GMWGMGGIGKTTTAKAIYNKIGRNFEGRSFLAHIREVWGQDTGKIC-LQKQILFDICKQT 358

Query: 236 -NMRNIESQL----NRLARKKVRIVFDDVTS----------------GSRVIITTRDKQV 274
             + N+ES       RL  K+V +V DDV+                 GSR+IIT+RDK +
Sbjct: 359 ETIHNVESGKYLLKQRLCHKRVLLVLDDVSELEQLNTLCGSREWFGRGSRIIITSRDKHI 418

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
           L+    +K Y MK +   ++ +LF   AF  + L    IEL+   I+Y+ G+PLAL+VLG
Sbjct: 419 LRGKGVDKVYIMKGMDERESIELFSWHAFKQESLPEDFIELSANLIEYSGGLPLALEVLG 478

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDE 393
           CYL       W++ ++KL+ IP+ ++++ LKISYD L DD+++ +FLDIACF  G  R++
Sbjct: 479 CYLFDMEVTEWKTVLQKLKRIPNCQVQKKLKISYDGLSDDTEREIFLDIACFFIGMDRND 538

Query: 394 VISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNR 440
           VI I +               +SL+ +D   ++ MHDLLRDMGREI+R +S   P +R+R
Sbjct: 539 VICILNGCGLFAEHGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRAKSPKEPEERSR 598

Query: 441 LWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCM 500
           LW H+D+  VL K TGT+A+EG++L + + N +  +++ AF KM KLR L+  G +    
Sbjct: 599 LWFHEDVLDVLSKETGTKAVEGLTLMLPRTNTKC-LSTTAFKKMKKLRLLQLAGVQLAGD 657

Query: 501 VSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
             +L      ++R L W   PLK +  +     LVS+++  + V+ LW + Q +      
Sbjct: 658 FKNLS----RDLRWLCWHGFPLKCIPTDFYQGSLVSIELENSNVKLLWKETQLME----- 708

Query: 559 FKTPITFEIIDCKMLERLPD--ELENLEYLT-VKGTTIRELPESLGRLSWVKRLILSNNS 615
            K  I   +     L + PD   L NLE L  +    + ++  ++GRL  V  + L +  
Sbjct: 709 -KLKI-LNLSHSSNLTQTPDFSNLPNLEKLILIDCPRLSKVSHTIGRLKEVVMINLKDCV 766

Query: 616 NLERIPESIRHLSKLTFLFISHC---ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
           +L  +P SI  L  L  L +S C   ++L+   E   +L  L A N T++ ++P  L   
Sbjct: 767 SLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMKSLTTLIADN-TAITRVPFSLVRS 825

Query: 673 SSVLYVNLC 681
            S+ Y++LC
Sbjct: 826 RSIGYISLC 834


>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 270/743 (36%), Positives = 398/743 (53%), Gaps = 110/743 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFI-DDQLIRGDNISQSLLGTIEASCIAII 60
           Y VF S R EDT  +F  +L+  L  K +  F  D +   G  I   LL  IE S IA++
Sbjct: 21  YHVFFSVRIEDTCRSFVRNLYKHLEHKGLLCFKHDGKPESGKPIPLDLLKAIEGSKIAVV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           + S+ YASS W                      F+ VDP  V+ Q+ SF +  +   K  
Sbjct: 81  VISQNYASSSWCLDELVKIIECKEIKGQSVFPIFHDVDPLQVKDQTGSFAQVLAEYEKDD 140

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK +RW+ ALT+ A + G++S     + KL EE++  +LK       S   GLVG++
Sbjct: 141 SMVEKAQRWRVALTKVALIDGWNSRDWPDDHKLTEEVSGAILKAWSQMSFSDINGLVGID 200

Query: 158 CSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             +E+I++LL +  +  V  + IWG+GGI K T A A+F +IS   E +YF  NVRE  E
Sbjct: 201 SRVEQIQTLLDMEFTTNVLFVGIWGMGGIGKTTTAKALFTQISNELEAAYFVANVREESE 260

Query: 217 TGGIKDLQKKLLSELSKDGN----MRNIESQ--LNRLARKKVRIVFDDVT---------- 260
              +  L+ ++LS + ++ N    MR+I  +  LNRL RK++ IV DDV+          
Sbjct: 261 KRTVVRLRDEILSNILEEENLHLGMRSILPRFILNRLRRKRILIVLDDVSNVEQLTTLAG 320

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSRVIIT+RDKQVL N  A++ Y +K L Y +A +L     F  +H    +IE
Sbjct: 321 DHSWFGSGSRVIITSRDKQVLVNA-ADRIYEVKGLNYCEALQLLSFKVFKQNHPVEGYIE 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ + + Y +GVPLAL VL  +L  + +E W S + KLE   ++EI++VLKISYD L+  
Sbjct: 380 LSKRVVNYTKGVPLALNVLASFLYSKQREEWTSTLEKLEESSNLEIQKVLKISYDELEWV 439

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
            K++FLDIACF +G   D V +I D               KSLI + +  ++ MHDLL++
Sbjct: 440 DKDIFLDIACFFKGADVDYVTTILDGCDFFPSIGISRLVDKSLIAI-IDNKLDMHDLLQE 498

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+ IV+KES  +PGK +RLW  + I+ VL  N GT A EGI LD++K+ + + ++S AF
Sbjct: 499 MGQHIVQKESSENPGKNSRLWTPESIHHVLTGNRGTFATEGIFLDISKIEK-VDLSSVAF 557

Query: 482 SKMPKLRFLRFYGD-----KNKC-MVSH--------LEGVPFAEVRHLEWPQCPLKTL-- 525
           SKM  LR L+FY +     KN    VS         L+ +P  ++  L W   P ++L  
Sbjct: 558 SKMWNLRLLKFYHNSFLSWKNPTGFVSESTLDSRDGLQSLP-NKLCFLHWHGYPWESLPS 616

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEY 585
           N   E LV L MP ++V++LW  V+ L       +     ++ D ++L  LPD       
Sbjct: 617 NFSMENLVELNMPFSQVKELWTGVKHL-------QKLKLLDLHDSELLVTLPD------- 662

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                         L   S ++++IL+N ++L  IP SI+ L KL  L +S+C+ LQ+LP
Sbjct: 663 --------------LSSASNLEKIILNNCTSLLEIPSSIQCLRKLVCLSLSNCKELQSLP 708

Query: 646 EL-PCN-LGLLSARNCTSLEKLP 666
            L P   L  L+  +C++L+K P
Sbjct: 709 SLIPLKYLKTLNLSSCSNLKKFP 731



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 160/356 (44%), Gaps = 61/356 (17%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIRELPESLGRLSWV 606
            ++ +PSS+   K      +  C  L +LP      +L  L +  + I ++P SLG LS +
Sbjct: 977  LRSIPSSIRELKRLQDVYLNHCTKLSKLPSLSGCSSLRDLVLSYSGIVKVPGSLGYLSSL 1036

Query: 607  KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP 666
            + L+L  N N  RIP +IR LS L  L IS+C+RL+ LPELP  + +L A NCTSL+ + 
Sbjct: 1037 QVLLLKGN-NFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVLVAHNCTSLKTVS 1095

Query: 667  AGL--------SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH-----------SLYEE 707
            + L         S          N + L+ N  S IV+   +K            + YEE
Sbjct: 1096 SPLIQFQESQEQSPDDKYGFTFANCVSLEKNARSNIVESALLKTQHLATAVLELLTSYEE 1155

Query: 708  RGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF 767
              +   + FPG+EIP+ FR+Q+ G+S T  T  P     NKL+ F FCAV+         
Sbjct: 1156 ILVSPVVCFPGSEIPECFRYQNTGASVT--TLLPSKWHNNKLVGFTFCAVIELEN----- 1208

Query: 768  RHKSGEDDWDGNVYAVCCDWKRKSE---------GHLYSWFLGKISYVESDHVFLGCNSF 818
            RH       DG  +   CD + ++E           +  W  G     E+DHVFL   S 
Sbjct: 1209 RHYQ-----DGFTFQ--CDCRIENEYGDSLEFTSKEIGEW--GNQFEFETDHVFLWNTSC 1259

Query: 819  GGEYFGPNYDEFSFRIHCS--FHFPPYLERG-----------EVKKCGIHFVYAQD 861
                    Y++   +  C+  F F  Y E             +VK  G + VYA+D
Sbjct: 1260 IYILTEERYEQLR-KNSCTAIFEFACYTEDEYKVMLPGANSFKVKNSGFNPVYAKD 1314



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 11/139 (7%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
           +D++ LP S+    +    ++  C  L+  PD + N++YL V  T I ELP S+G L  +
Sbjct: 769 EDLKSLPGSI-HLNSLDNLDLSWCSSLKNFPDVVGNIKYLNVGHTAIEELPSSIGSLVSL 827

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR-----NCTS 661
            +L L  ++ ++ +P SI +LS L  L +       ++ ELP ++G LS+          
Sbjct: 828 TKLNL-KDTEIKELPSSIGNLSSLVELNLKE----SSIKELPSSIGCLSSLVKLNIAVVD 882

Query: 662 LEKLPAGLSSMSSVLYVNL 680
           +E+LP+ L  +SS++  NL
Sbjct: 883 IEELPSSLGQLSSLVEFNL 901



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 44/192 (22%)

Query: 528  CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLE 584
            C   LV L +          D++ LPSSL    + + F + +   L  LP     L +L 
Sbjct: 869  CLSSLVKLNIAVV-------DIEELPSSLGQLSSLVEFNL-EKSTLTALPSSIGCLTSLV 920

Query: 585  YLTVKGTTIRELPESLGRLS------------------------WVKRLILSNNSNLERI 620
             L +  T I+ELP S+G LS                         +++L L     L  I
Sbjct: 921  KLNLAVTEIKELPPSIGCLSSLVELNLSQCPMLGSLPFSIGELKCLEKLYLCGLRRLRSI 980

Query: 621  PESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC----TSLEKLPAGLSSMSS-- 674
            P SIR L +L  ++++HC +L  LP L    G  S R+     + + K+P  L  +SS  
Sbjct: 981  PSSIRELKRLQDVYLNHCTKLSKLPSLS---GCSSLRDLVLSYSGIVKVPGSLGYLSSLQ 1037

Query: 675  VLYVNLCNFLKL 686
            VL +   NF+++
Sbjct: 1038 VLLLKGNNFMRI 1049


>gi|255563218|ref|XP_002522612.1| phosphoprotein phosphatase [Ricinus communis]
 gi|223538088|gb|EEF39699.1| phosphoprotein phosphatase [Ricinus communis]
          Length = 838

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 241/631 (38%), Positives = 353/631 (55%), Gaps = 85/631 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR+ F SHL   L  K I  F D+ L RG+ IS +L  TIE S + ++I
Sbjct: 13  YDVFLSFRGLDTRNGFLSHLFKALREKQIIAFKDENLDRGEQISDTLSRTIEESYVLVVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ Y  S W                      FY +DP+ V++ + S+       RK F 
Sbjct: 73  LSKNYVDSPWCLDELVKILQCNKEKGQVVLPVFYEIDPTEVQELTGSYADALMNHRKEFE 132

Query: 101 EKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVGVE 157
           + + + W +AL E A ++GF S  ++PESKLIEEI + + +RL+ TF     + GLVG+ 
Sbjct: 133 DCLVESWSHALKEIAGMAGFVSRNMKPESKLIEEIVDHIWERLNQTFSYYHYDDGLVGIN 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I++IE +LC+ S+ V  L IWG+GGI K TIA  +F++IS  FE   F  NVRE  E 
Sbjct: 193 SRIKDIELILCLESKDVRILGIWGMGGIGKTTIASKIFDQISSQFERICFVANVREKLEK 252

Query: 218 GGIKDLQKKLLSEL-----SKDGNMRNIESQLNR--LARKKVRIVFDDV----------- 259
             +  LQ+++L++L     S  G    + S   R  + RKKV IV DDV           
Sbjct: 253 STLDSLQQEILTKLLGKEYSDLGMPIKLSSSFIRKWITRKKVLIVLDDVNDSEQTKFLVG 312

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                + GSR+I+T+RDKQ+LKN  A + Y +K+L Y +A +LF   AF  +    + +E
Sbjct: 313 ARDIYSPGSRIIMTSRDKQILKNGGA-EIYEVKKLNYHNAFQLFILRAFKENPPAEALME 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +T  A++Y QG+PLALKVLG  LC ++ + W   ++KLE I   +I+ VL+IS+D LD+ 
Sbjct: 372 VTRMAVEYGQGIPLALKVLGSTLCDKNIKEWRDHLKKLEGISDKKIQNVLRISFDDLDED 431

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +K +FLDIACF + E ++EV SI  +              KSLI +    +I MHDLL+ 
Sbjct: 432 EKEIFLDIACFFKSEDKNEVESILSSFGRSAITGIRILQDKSLITVS-NEKIEMHDLLQQ 490

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNSYA 480
           MGR+IVR+E +  P KR+RLW+ +DIY +L  + G   ++E ISLDM+++ R+I ++  A
Sbjct: 491 MGRDIVRQEGVKDPRKRSRLWNPQDIYHLLTNDLGKNISVESISLDMSQI-RDIELSPAA 549

Query: 481 FSKMPKLRFLR-----------FYGDKNKCMVSHLEGVPFAE--------VRHLEWPQCP 521
           F +M KL+FLR           +Y     C       +  +E        +R+L W + P
Sbjct: 550 FEEMSKLKFLRLHTTCLEPGFSYYQQNKVCHPCKRTKISLSEELSFLPNGLRYLYWYEYP 609

Query: 522 LKT--LNICAEKLVSLKMPCTKVEQLWDDVQ 550
            K+  L+ C + LV L +  + V+QL +  Q
Sbjct: 610 SKSLPLSFCPDNLVQLHLRHSHVQQLCNSDQ 640


>gi|359477831|ref|XP_002282906.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 879

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 269/777 (34%), Positives = 395/777 (50%), Gaps = 135/777 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S   II
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           +FS+ YA SRW                      FY VDPS VR Q  SFG     H    
Sbjct: 80  VFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGEALAYHERDA 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   E +++W+ ALT+AA LSG   +  + E+++++EI N +++RL+    S  K +VG
Sbjct: 140 NQEKKEMVQKWRIALTKAAYLSGCHVDD-QYETEVVKEIVNTIIRRLNRQPLSVGKNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++SL+      V  + I G GG+ K TIA A++N+IS  ++GS F  N+RE  
Sbjct: 199 ISVHLEKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRERS 258

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDV---------- 259
           + G I  LQ++LL  +   K   +  ++  ++ + R     +V I+FDDV          
Sbjct: 259 K-GDILQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRVLIIFDDVDELKQLEYLA 317

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDK VL     +  Y + +L   +A +LF  WAF  +H    + 
Sbjct: 318 EEKDWFQAKSTIIITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKEVYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKVLG  L G+    WESAM KL+IIPH+EI  VL+IS+D LDD
Sbjct: 378 NLSYNIIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLLRDMG 423
             K +FLD+ACF +G+ +  V  I            A + LI +    R+ MHDL++ MG
Sbjct: 438 VDKGIFLDVACFFKGDDKYFVSRILGPHAKHGITTLADRCLITVSK-NRLDMHDLIQQMG 496

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            EI+R+E    PG+R+RLW   + Y VL +N GT+AIEG+ LD  K N    +   +F +
Sbjct: 497 WEIIRQECPKDPGRRSRLW-DSNAYHVLIRNMGTQAIEGLFLDRCKFNPS-QLTMESFKE 554

Query: 484 MPKLRFLRFYGDKNKCMV-SHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           M KLR L+ +  + K  + +HL     F+  E+R+L W   PL++L  N  A+ LV L +
Sbjct: 555 MNKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVELSL 614

Query: 538 PCTKVEQLWD----------------------------------------DVQRLPSSLC 557
             + ++Q+W                                         +++ LP  + 
Sbjct: 615 RDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEGCVNLELLPRGIY 674

Query: 558 TFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPESLGRLSWVKRLILSNN 614
             K   T     C  LER P+ + N+  L V    GT I +LP S+  L+ ++ L+L   
Sbjct: 675 KLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC 734

Query: 615 SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLPELP 648
           S L +IP                        +I  LS+L  L +SHC  L+ +PELP
Sbjct: 735 SKLHQIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELP 791


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 266/745 (35%), Positives = 391/745 (52%), Gaps = 89/745 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR+NFT HL  +L    I TF +D+ +R + I   +L TIE S I+I++
Sbjct: 20  FDVFLSFRGEDTRNNFTVHLFKILGRMGINTFRNDEPLRREEIQSGILKTIEESRISIVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YA S+W                      FY VDPS VRKQ+ SFG  FS   +   
Sbjct: 80  FSRNYAHSQWCLDELAKIMECRKQNEQIVLPVFYHVDPSDVRKQTGSFGNAFSNYERGVD 139

Query: 101 EK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           EK ++RW++A TEAAD  GF       E  +I++I N V    +   +     L+G++  
Sbjct: 140 EKKVQRWRDAFTEAADTDGFRVPEDGDEPTIIKKIINFV----NGELKLPGHNLIGIDGR 195

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +EE++SL+ IGS  V  L +WG+GGI K TIA  ++N IS  F+G+ F  +V +      
Sbjct: 196 LEELKSLIGIGSYDVRMLGVWGLGGIGKTTIARVIYNSISYQFDGASFLPSVCQQS---- 251

Query: 220 IKDLQKKLLSE---LSKDGNMRNIESQLNRLARKKVRIVFDDVT---------------- 260
           + +++KKLL +   LS  G   +     N++ +KK+ IV DDV                 
Sbjct: 252 MPNVKKKLLCDITGLSYGGLNVDEGLNKNKIKKKKILIVVDDVDCLSQLKDLVPNGDWLG 311

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
            GSR+IITTRDK +L     +  Y ++ L +A++  LF  +AF       ++   +   +
Sbjct: 312 GGSRIIITTRDKHLLLEHGVDAIYEVQGLDFAESIHLFNLYAFQARFPKPAYRGFSRNIV 371

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            Y++G+PLALKV G +L  +S + WESA+ KL+     EI++V +ISYD LD   K++FL
Sbjct: 372 NYSEGLPLALKVFGDFLFRKSIDEWESALYKLKHQSMKEIQDVFQISYDRLDYKTKDIFL 431

Query: 381 DIACFLEGEHRDEVISIFDASKSLI----NLDLFY----RIRMHDLLRDMGREIVRKESI 432
           DIACF +GE R+ V  I D ++  I    N  L      +I MH LL+ MG+ +V +   
Sbjct: 432 DIACFFKGEEREFVSRILDGAEKAITDLSNKSLLTFSNNKIMMHPLLQQMGQGVVHQACP 491

Query: 433 NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR------------EIHMNSYA 480
             PGK++RLW  +D++++L KN GT+AIEGI LD +                 I   + A
Sbjct: 492 QEPGKQSRLWRSEDVHRILLKNEGTDAIEGIFLDTSPAEPIEFTILDTSPAVPIEFTTEA 551

Query: 481 FSKMPKLRFLRF-YGDKNKCMVSHLE-------GVPFAEVRHLEWPQCPLKTL--NICAE 530
           F  M KLR L+   G K   MV + E         P  E+R+L W   PL+ L  N   E
Sbjct: 552 FKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELRYLHWDGYPLEYLPSNFHGE 611

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L +  +K+  LW  ++ L       +      +   + L ++PD  +  NLE L +
Sbjct: 612 NLVELNLRYSKLRVLWQGLKPL-------EKLKVINLSHSQQLIQIPDFSDTPNLESLIL 664

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           KG T +  +P S+  L  +  L LS+ S L+ + E   +L  L +L ++ C+ L++LPE 
Sbjct: 665 KGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYSLEYLNLASCKNLKSLPES 724

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSM 672
            CNL  L   N     KLP  L S+
Sbjct: 725 LCNLKCLKTLNVIGCSKLPDNLGSL 749



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 23/216 (10%)

Query: 554 SSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLTVK--GTTIRELPESLGRLSWVK 607
           + LC+ K     ++ D  +++R        L +LE L +     T +E+P+ +  L  ++
Sbjct: 772 AGLCSLKV---LDMHDTNLMQRAISGDIGSLYSLEELNLSYCNLTEKEIPDDICCLYSLR 828

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
            L LS N  L  + ++I  LS+L  L + HC+ L  +P+LP +L +L A +CT ++    
Sbjct: 829 VLDLSGNLFL-GVTDAISQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKT--- 884

Query: 668 GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK--SMYFPGN-EIPKW 724
            LSS S + +    N  K     L EI +  + +       G+ +  S   PG+ E+P+W
Sbjct: 885 -LSSTSVLQWQWQLNCFK--SAFLQEIQEMKYRRLLSLPANGVSQGFSTVIPGSGELPEW 941

Query: 725 FRHQSMGSSATLKTRPPRPAGYNK-LISFAFCAVVV 759
            +HQ +G+   +   P  P  Y+K  +  A C V +
Sbjct: 942 IQHQGVGNEVIV---PLPPNWYDKDFLGLALCCVYI 974


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 282/748 (37%), Positives = 401/748 (53%), Gaps = 101/748 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR  FTSHLH  L  K I TFID QL+RGD IS SLL TIE + +++II
Sbjct: 47  HDVFLSFRGEDTRVGFTSHLHAALDRKQILTFIDYQLVRGDEISASLLRTIEEAKLSVII 106

Query: 62  FSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRL---RKRFPEKMKRWKNALTEAADLSG 118
                      FY+VDPSHVR Q+ SFG  F+RL   +    E+++ ++ ALT+AA LSG
Sbjct: 107 VIP-------VFYKVDPSHVRNQTGSFGDAFARLIRNKALTLEEVQSFREALTDAASLSG 159

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKL 177
           ++      E++ IE+I  DVL +L A   S    GL G++  + ++ESLL I S     +
Sbjct: 160 WNLGNSELEAEFIEKIVGDVLGKLHAMSSSHTMAGLFGIDVRVSKVESLLNINSPDFRIV 219

Query: 178 RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDG-- 235
            IWG+GGI K TIA  V +K+   F+G +F  N R+        DLQ+  LS+L      
Sbjct: 220 GIWGMGGIGKTTIAKVVCDKVRSRFDGIFFG-NFRQQ------SDLQRSFLSQLLGQEIL 272

Query: 236 -----NMRNIESQLNRLARKKVRIVFDDVTS--------------------GSRVIITTR 270
                + R+I  + NRL R KV IV DDV +                    GS+V+IT+R
Sbjct: 273 NRGLLSFRDIFVR-NRLCRIKVFIVMDDVDNSMALEEWRDLLDGRNSSFGPGSKVLITSR 331

Query: 271 DKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLAL 330
           DKQVLKN   ++ Y++  L Y DA +LF   A           +L  +  ++ QG PLAL
Sbjct: 332 DKQVLKNV-VDQTYKVVGLNYEDAIQLFSSKALKNCTPTIDQRDLIKQIARHVQGNPLAL 390

Query: 331 KVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEH 390
           KVLG    G+S E W SA+ KL   P  +IE+ L+ISYD LD  QK++FLDIA F     
Sbjct: 391 KVLGSSFYGKSIEEWRSALNKLAQDP--QIEKALRISYDGLDSEQKSIFLDIAHFFIIWK 448

Query: 391 RDEVISIFDA--------------SKSLI-------NLDLFYRIRMHDLLRDMGREIVRK 429
           +D+   I D                K LI       ++D   R+ MHDLL +M   IVR 
Sbjct: 449 QDKATRILDCVYGRSVKFDISTLIDKCLITTDNRLNSVDGNERLEMHDLLEEMAFNIVRA 508

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           ES + PG+R+RL H  D  QVL++N GT+ I+GISL+++ ++R IH+ S  F+ M  LRF
Sbjct: 509 ES-DFPGERSRLCHPPDFVQVLEENKGTQKIKGISLEVSMLSRHIHLKSDTFAMMDGLRF 567

Query: 490 LRFYGD------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK 541
           L F  D      K     + LE +P  E+R+L W + P K+L  +  AE LV L++P +K
Sbjct: 568 LNFDHDGSSQEYKMHLPPTGLEYLP-NELRYLRWDEFPSKSLPPSFRAEHLVELRLPKSK 626

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPE 598
           + +LW  V+ + +         T ++ +   L  LPD    +NL  L + +  ++ E+P 
Sbjct: 627 LVRLWTGVKDVGNLR-------TIDLSESPYLTELPDLSMAKNLVCLRLGRCPSLTEVPS 679

Query: 599 SLGRLSWVKRLILSNNSNLERIP----ESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           SL  L  ++ + L+   NL   P    + +R LS      I  C  L T P +  N+  L
Sbjct: 680 SLQYLDKLEEIDLNRCYNLRSFPMLDSKVLRKLS------IGLCLDLTTCPTISQNMVCL 733

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCN 682
                TS++++P  ++    VL +N C+
Sbjct: 734 RLEQ-TSIKEVPQSVTGKLKVLDLNGCS 760



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 29/205 (14%)

Query: 580  LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS--- 636
            + +L  L + GT ++ELP S+  L+ +  L LS  S LE  PE    +  L  L +S   
Sbjct: 839  MTSLNTLNLDGTPLKELPSSIQFLTRLYELNLSGCSKLESFPEITVPMKSLEVLNLSKTG 898

Query: 637  ---------------HCERL-----QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
                            C  L     + LPELP  L  L+ R+C SLE   + ++  S   
Sbjct: 899  IKEIPSSLIKHLISLRCLNLDGTPIKALPELPSLLRKLTTRDCASLETTISIINFSSLWF 958

Query: 677  YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
             ++  N  KLD   L  ++           +  I+  M  PG+EIP+WF  + +GSS T+
Sbjct: 959  GLDFTNCFKLDQKPLVAVMHLKIQSGEEIPDGSIQ--MVLPGSEIPEWFGDKGVGSSLTI 1016

Query: 737  KTRPPRPAGYNKLISFAFCAVVVFP 761
            +     P+  ++L   AFC V + P
Sbjct: 1017 QL----PSNCHQLKGIAFCLVFLLP 1037



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 40/215 (18%)

Query: 495 DKNKCMVSHLEGVPFAE---VRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQR 551
           D N+C   +L   P  +   +R L    C    L++     +S  M C ++EQ    ++ 
Sbjct: 691 DLNRCY--NLRSFPMLDSKVLRKLSIGLC----LDLTTCPTISQNMVCLRLEQ--TSIKE 742

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           +P S+ T K  +  ++  C  + + P+   ++E L + GT I+E+P S+  L+ ++ L +
Sbjct: 743 VPQSV-TGKLKV-LDLNGCSKMTKFPEISGDIEQLRLSGT-IKEMPSSIQFLTRLEMLDM 799

Query: 612 SNNSNLERIPESIRHLSKLTFLFIS-------------HCERLQT-------LPELPCNL 651
           S  S LE  PE    +  L +LF+S             H   L T       L ELP ++
Sbjct: 800 SGCSKLESFPEITVPMESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDGTPLKELPSSI 859

Query: 652 GLLS------ARNCTSLEKLPAGLSSMSSVLYVNL 680
             L+         C+ LE  P     M S+  +NL
Sbjct: 860 QFLTRLYELNLSGCSKLESFPEITVPMKSLEVLNL 894


>gi|356558197|ref|XP_003547394.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1122

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 271/807 (33%), Positives = 396/807 (49%), Gaps = 154/807 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D R NF SHL  +     I  F+DD+L +GD I  SL+  IE S I +II
Sbjct: 94  YDVFVSFRGKDVRGNFLSHLDEIFKRNKIYAFVDDKLKKGDEIWSSLVEAIEQSFILLII 153

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASSRW                      FY V+P+ VR Q  S+   F +  KR  
Sbjct: 154 FSQSYASSRWCLKELEAILECNKKYGRIVIPVFYHVEPADVRHQRGSYKNAFKKHEKRNK 213

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            K++ W++AL ++A++ G +++ IR E +L++EI   VLKRL  +    +K L+G++  I
Sbjct: 214 TKVQIWRHALKKSANIVGIETSKIRNEVELLQEIVRLVLKRLGKS-PINSKILIGIDEKI 272

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
             +ESL+    +  C + IWG+ G  K T+A  VF K+   ++G YF  N RE     GI
Sbjct: 273 AYVESLIRKEPKVTCLIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLANEREQSSRHGI 332

Query: 221 KDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
             L+K++ S L +      D N+  I+    R+ R KV IV DDV               
Sbjct: 333 DSLKKEIFSGLLENVVTIDDPNVSLIDID-RRIGRMKVLIVLDDVNDPDHLEKLLGTPDN 391

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+IITTR  QVL    AN+ Y++ E     A +LF   AF        + EL+ K
Sbjct: 392 FGSGSRIIITTRYVQVLNANKANEIYQLGEFSLDKALELFNLIAFKQSDHQWEYNELSKK 451

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YA+G PL LKVL   LCG+ KE WE  +  L+ +P  ++ +V+K+SYD LD  ++ +
Sbjct: 452 VVDYAKGNPLVLKVLAQLLCGKDKEEWEGMLDSLKRMPPADVYKVMKLSYDVLDRKEQQI 511

Query: 379 FLDIACF----------------LEGEHRDEVISIFDA---SKSLINLDLFYRIRMHDLL 419
           FLD+ACF                L+G    E ++        ++LI       I MHD L
Sbjct: 512 FLDLACFFLRTNTMVNVSNLKSLLKGNESQETVTFRLGRLKDQALITYSDDNVIAMHDSL 571

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++M  EIVR+ES   PG R+RLW   DI++  K +  T+AI  I + +    ++  +  +
Sbjct: 572 QEMAMEIVRRESSEDPGSRSRLWDPNDIFEASKNDKSTKAIRSILIHLPTFMKQ-ELGPH 630

Query: 480 AFSKMPKLRFLRFYG-------DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            F KM +L+FL   G       D+   +   L+     E+R L W   PLK+L  N  AE
Sbjct: 631 IFGKMNRLQFLEISGKCEEDSFDEQNILAKWLQ-FSANELRFLCWYHYPLKSLPENFSAE 689

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
           KLV LK+P  +++ LW  V+    +L   K      + D KMLE LPD     NLE L +
Sbjct: 690 KLVILKLPKGEIKYLWHGVK----NLVNLKE---LHLTDSKMLEELPDLSNATNLEVLVL 742

Query: 589 KG----TTIRELPESLG------------------------------------------- 601
           +G    TT+     SLG                                           
Sbjct: 743 EGCSMLTTVHPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNLDKCEKLRKLSLIT 802

Query: 602 ------RLSWVK--------------RLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
                 RL W K              +L+L   S ++++P SI+ L +L+ L +S+C +L
Sbjct: 803 ENIKELRLRWTKVKAFSFTFGDESKLQLLLLEGSVIKKLPSSIKDLMQLSHLNVSYCSKL 862

Query: 642 QTLPELPCNLGLLSAR---NCTSLEKL 665
           Q +P+LP +L +L AR   +CTSL+ +
Sbjct: 863 QEIPKLPPSLKILDARYSQDCTSLKTV 889


>gi|357515097|ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
 gi|355521859|gb|AET02313.1| NBS resistance protein [Medicago truncatula]
          Length = 1731

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 258/733 (35%), Positives = 381/733 (51%), Gaps = 99/733 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR  FTSHLH  L    + T+ID ++ +GD++   L+  I+ S + +++
Sbjct: 14  YDVFISFRGEDTRTCFTSHLHAALCRTHLHTYIDYKIEKGDDVWSELVKAIKQSTLFLVV 73

Query: 62  FSERYASSRW------------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           FSE YASS W                         FY VDPSHVRKQ+ S+G    +  +
Sbjct: 74  FSENYASSTWCLNELVEIMECSNKNEDDNVVVVPVFYHVDPSHVRKQTGSYGTALEKHME 133

Query: 98  R---FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           +     + M+ WKNAL +AA+LSGF S   R ES LIE+I   VL +L+    +      
Sbjct: 134 QDNNGDKMMQNWKNALFQAANLSGFHSATYRTESDLIEDITRVVLGKLNQQCTNDLTCNF 193

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            ++ +   I+SL+   S  V  + IWG+GG  K T+A  +F + S  +EGS     V E 
Sbjct: 194 ILDENYWSIQSLIKFDSAQVQIIGIWGMGGTGKTTLASILFQRFSFKYEGSCLFEKVTEV 253

Query: 215 EETGGIKDLQKKLLSELSKDG----NMRNIESQLNR-LARKKVRIVFDDV---------- 259
            +  GI     KLLS+L ++     + + I S + R L   K  IV DDV          
Sbjct: 254 SKRHGINYACNKLLSKLLREDLDIDSPKLIPSMIRRRLKSMKSFIVLDDVHNSELLQNLI 313

Query: 260 -------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGS VI+TTRDK VL +   +K Y +K++   ++ KLF   AF        +
Sbjct: 314 GVGHGWLGSGSTVIVTTRDKHVLISGGIDKIYEVKKMNSRNSVKLFSMNAFDKVSPKDGY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL+ +A+ YA G PLALKVLG  L  +S+  W+ A+ KL+ IP+ EI+ + ++SYD LD
Sbjct: 374 VELSKRAVDYANGNPLALKVLGSLLRCKSEIEWDCALAKLKKIPNNEIDSIFRLSYDELD 433

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D +K++FLDIACF +G  R+ +  I +               K+L+ +D    I+MHDL+
Sbjct: 434 DKEKDIFLDIACFFKGHERNSITKILNECGFFADIGISHLLDKALVRVDSKNCIQMHDLI 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MG++IVR+ES  +PG+R+RL   K++Y VLK N G++ +E I  D  +    +++   
Sbjct: 494 QEMGKQIVREESHKNPGQRSRLCDPKEVYDVLKNNRGSKNVEAIFFDATQCTH-VNLRPD 552

Query: 480 AFSKMPKLRFLRFYGDKNKCMVS--HLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
            F KM  LR L F   K    VS  H  G+    +R+  W   PLKTL    C E LV L
Sbjct: 553 TFEKMKNLRLLAFQDQKGVKSVSLPHGLGLLPENLRYFLWDGYPLKTLPPTFCLEMLVEL 612

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IR 594
            +  + VE+LW+ V  +P                            NLE + + G+T + 
Sbjct: 613 SLTGSLVEKLWNGVLNVP----------------------------NLEKIDLSGSTKLI 644

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
           E P   G  + +K ++L    ++  +  SI HL KL  L +S C  L+++    C+  L 
Sbjct: 645 ECPNVSGSPN-LKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCSPALR 703

Query: 654 -LSARNCTSLEKL 665
            LSA NC +L+ L
Sbjct: 704 QLSAINCFNLKDL 716



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 9/113 (7%)

Query: 617 LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM---- 672
           ++ +PE++++L +L F+ I  C+ LQ++P L   + +L   NC SLE++   LSS     
Sbjct: 832 IKSLPETVKYLPQLKFVDIHDCKLLQSIPALSQFIQILVVWNCESLEEV---LSSTREPY 888

Query: 673 --SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPK 723
              +V +++L N   +D +    ++KD      L   R I K  +    ++ +
Sbjct: 889 DEPNVCFISLLNCKNMDSHSYQTVLKDAMDGIELVNMRIIIKFFHVDNEDVKR 941


>gi|193584700|gb|ACF19650.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1098

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 261/754 (34%), Positives = 403/754 (53%), Gaps = 85/754 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +F SHL   L    I  F DDQ L RGD+IS SL+  IE+S I++I
Sbjct: 37  YDVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISVI 96

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S+W                      FY VDPS VR Q+  FG+ F  L  R 
Sbjct: 97  VFSKNYADSKWCLQELWQIMVRHRTTGQVVLPVFYDVDPSEVRHQTGEFGKSFLNLLNRI 156

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
             + K     W+N L  AA L+GF     R ES++I++I  +V + LD T        VG
Sbjct: 157 SHEEKWMALEWRNELRVAAGLAGFVVLNSRNESEVIKDIVENVTRLLDKTDLFVADNPVG 216

Query: 156 VECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  ++++  LL    +  V  L +WG+GGI K T+A A++NKI R+FEG  F  N+RE 
Sbjct: 217 IDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREV 276

Query: 215 -EETGGIKDLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS------ 261
             +  G  +LQ++L+ ++ K+    ++N+ES ++    RL  K+V +V DDV        
Sbjct: 277 WGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLDQLNA 336

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTRDK +L+    +K Y MKE+  +++ +LF   AF        
Sbjct: 337 LCGSCKWFAPGSRIIITTRDKHILRGNRVDKIYIMKEMDESESLELFSWHAFKQARPSKD 396

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             E++   ++Y+  +PLAL+VLG YL  R    W   + KL+ IP+ ++ + LKISYD L
Sbjct: 397 FSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKLKISYDGL 456

Query: 372 -DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
            DD++K++FLDIACF  G  R++VI I + S             +SL+ +D   ++ MHD
Sbjct: 457 NDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHD 516

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGREI+R++S   P +R+RLW H D+  VL ++TGT+A+EG++L M   +     +
Sbjct: 517 LLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKM-PCHSAQRFS 575

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           +  F  M KLR L+  G +      ++       ++ L W   PL+ +  N     +VS+
Sbjct: 576 TKTFENMKKLRLLQLSGVQLDGDFKYIS----RNLKWLHWNGFPLRCIPSNFYQRNIVSI 631

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT- 592
           ++  +  + +W ++QR+       +      +     L + PD   L NLE L ++    
Sbjct: 632 ELENSNAKLVWKEIQRM-------EQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPR 684

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC---ERLQTLPELPC 649
           + ++  S+G L  V  + L +  +L  +P +I  L  L  L +S C   ++L+   E   
Sbjct: 685 LSQVSHSIGHLKKVVLINLKDCISLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQME 744

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           +L  L A N T + K+P  L    S+ +++LC +
Sbjct: 745 SLTTLIANN-TGITKVPFSLVRSKSIGFISLCGY 777


>gi|357468645|ref|XP_003604607.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355505662|gb|AES86804.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 936

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 261/754 (34%), Positives = 403/754 (53%), Gaps = 85/754 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +F SHL   L    I  F DDQ L RGD+IS SL+  IE+S I++I
Sbjct: 37  YDVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISVI 96

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S+W                      FY VDPS VR Q+  FG+ F  L  R 
Sbjct: 97  VFSKNYADSKWCLQELWQIMVRHRTTGQVVLPVFYDVDPSEVRHQTGEFGKSFLNLLNRI 156

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
             + K     W+N L  AA L+GF     R ES++I++I  +V + LD T        VG
Sbjct: 157 SHEEKWMALEWRNELRVAAGLAGFVVLNSRNESEVIKDIVENVTRLLDKTDLFVADNPVG 216

Query: 156 VECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  ++++  LL    +  V  L +WG+GGI K T+A A++NKI R+FEG  F  N+RE 
Sbjct: 217 IDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREV 276

Query: 215 -EETGGIKDLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS------ 261
             +  G  +LQ++L+ ++ K+    ++N+ES ++    RL  K+V +V DDV        
Sbjct: 277 WGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLDQLNA 336

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTRDK +L+    +K Y MKE+  +++ +LF   AF        
Sbjct: 337 LCGSCKWFAPGSRIIITTRDKHILRGNRVDKIYIMKEMDESESLELFSWHAFKQARPSKD 396

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             E++   ++Y+  +PLAL+VLG YL  R    W   + KL+ IP+ ++ + LKISYD L
Sbjct: 397 FSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKLKISYDGL 456

Query: 372 -DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
            DD++K++FLDIACF  G  R++VI I + S             +SL+ +D   ++ MHD
Sbjct: 457 NDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHD 516

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGREI+R++S   P +R+RLW H D+  VL ++TGT+A+EG++L M   +     +
Sbjct: 517 LLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKM-PCHSAQRFS 575

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           +  F  M KLR L+  G +      ++       ++ L W   PL+ +  N     +VS+
Sbjct: 576 TKTFENMKKLRLLQLSGVQLDGDFKYIS----RNLKWLHWNGFPLRCIPSNFYQRNIVSI 631

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT- 592
           ++  +  + +W ++QR+       +      +     L + PD   L NLE L ++    
Sbjct: 632 ELENSNAKLVWKEIQRM-------EQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPR 684

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC---ERLQTLPELPC 649
           + ++  S+G L  V  + L +  +L  +P +I  L  L  L +S C   ++L+   E   
Sbjct: 685 LSQVSHSIGHLKKVVLINLKDCISLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQME 744

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           +L  L A N T + K+P  L    S+ +++LC +
Sbjct: 745 SLTTLIANN-TGITKVPFSLVRSKSIGFISLCGY 777


>gi|356560719|ref|XP_003548636.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1139

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 410/775 (52%), Gaps = 89/775 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRGEDTR NF SHL+  LS   + TF+D+    +G+ +++ LL TIE   I +
Sbjct: 15  IYDVFINFRGEDTRRNFVSHLYSALSNAGVNTFLDEMNYPKGEELNEGLLRTIEGCRICV 74

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++FS  Y +S W                      FY VDPS +R Q  +FG++    +  
Sbjct: 75  VVFSTNYPASSWCLKELEKIIECHKTYGHIVLPIFYDVDPSDIRHQQGAFGKNLKAFQGL 134

Query: 99  FPEK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           + E  + RW   LT+AA+ SG+D +  R E++ ++EI  DVL +LD TF    +  VG+E
Sbjct: 135 WGESVLSRWSTVLTQAANFSGWDVSNNRNEAQFVKEIVEDVLTKLDNTFMPITEFPVGLE 194

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++E+   +   S  VC + IWG+GG+ K T A A++N+I R F G  F  ++RE  ET
Sbjct: 195 SHVQEVIGYIENQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFTGRCFIEDIREVCET 254

Query: 218 G--GIKDLQKKLLSELSKDG-NMRNI----ESQLNRLARKKVRIVFDDVT---------- 260
              G   LQ++LLS++ K   N++++        ++L+  K  IV DDV           
Sbjct: 255 DRRGHVHLQEQLLSDVLKTKVNIKSVGIGRAMMESKLSGTKALIVLDDVNEFGQLKVLCG 314

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GS VIITTRD ++L     +  Y+M+E+    + +LF   AFG         E
Sbjct: 315 NRKWFGQGSIVIITTRDVRLLHKLKVDFVYKMEEMDENKSLELFSWHAFGEAKPIEEFDE 374

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DD 373
           L    + Y  G+PLAL+V+G YL  R+K+ WES + KL+IIP+ +++E L+ISY+ L D 
Sbjct: 375 LARNVVAYCGGLPLALEVIGSYLSERTKKEWESVLSKLKIIPNDQVQEKLRISYNGLCDH 434

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            +K++FLD+ CF  G+ R  V  I +               +SL+ +    ++ MH LLR
Sbjct: 435 MEKDIFLDVCCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLGMHPLLR 494

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMGREI+R+ S   PGKR+RLW H+D   VL KNTGT+AIEG++L ++  +R+    +YA
Sbjct: 495 DMGREIIRESSTKKPGKRSRLWFHEDSLNVLTKNTGTKAIEGLALKLHSSSRDC-FKAYA 553

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           F  M +LR L+         ++   G     +R + W   PLK +  N     ++++ + 
Sbjct: 554 FKTMKQLRLLQL----EHVQLTGDYGYLPKHLRWIYWKGFPLKYMPKNFYLGGVIAIDLK 609

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLTVKG-TT 592
            + +  +W D Q LP            +I++    K L   PD  +L +LE L +K   +
Sbjct: 610 DSNLRLVWKDPQVLP----------WLKILNLSHSKYLTETPDFSKLPSLEKLILKDCPS 659

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC--- 649
           + ++ +S+G L  +  + L + ++L  +P  I  L  L  L IS   R+  L E      
Sbjct: 660 LCKVHQSIGDLQNLLWINLKDCTSLSNLPREIYKLKSLKTLIISG-SRIDKLEEDIVQME 718

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
           +L  L A++ T+++++P  +  + S+ Y++LC +  L  N    I+   WM  ++
Sbjct: 719 SLTTLIAKD-TAVKQVPFSIVRLKSIGYISLCGYEGLSRNVFPSIIW-SWMSPTM 771


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 274/758 (36%), Positives = 407/758 (53%), Gaps = 89/758 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG+DTR NFTSHL+H L  K I  FID ++ RG  IS +++  I  S I+I +
Sbjct: 12  HDVFLSFRGKDTRFNFTSHLYHALCSKGINCFIDGRIERGVEISHAIIRAIRGSRISIAV 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS +                      FY+VDP  V KQ+ +FG+ F  +   F 
Sbjct: 72  FSQDYASSSYCLDELLAMLSCNASRDHFFFPIFYKVDPEDVEKQTGNFGKAFGEVEAEFS 131

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ RWK AL +AA  +G+       E+K I+ I  +V  +L+ T     +  VG+E
Sbjct: 132 GNLEKVSRWKAALAKAAKFAGWPLLDNGDEAKFIQSIVENVSTKLNRTLLHVAEHPVGLE 191

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
              +E+ SLL   S+ V  + I G GGI K TIA A++NKI+  FEGS F  NVR+  E 
Sbjct: 192 SHAKEVMSLLNPSSKDVWMVGICGTGGIGKTTIAKAIYNKIANQFEGSCFLENVRKTPEE 251

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT----------- 260
             ++ LQ+ LL E+  D N+      R I    +RL  K+V IV DDV            
Sbjct: 252 CFVQ-LQESLLIEVLGDKNIFVGNFSRGINCIKDRLCSKRVLIVIDDVDHVDQLKKLAAV 310

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
               +GSR+IITTRD+++L        +++ EL   DA  LF   AF        ++EL+
Sbjct: 311 NGFGAGSRIIITTRDERLLVEHGVKSIHKINELCPNDALVLFSWNAFKNPQPAEDYMELS 370

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
              + YA+G+PLAL VLG +L  R+   WES + KL+  P+  I E+LKISYD LD ++K
Sbjct: 371 QWIVNYAKGLPLALVVLGSFLYKRAVPEWESEIAKLKRNPNKHIYEMLKISYDGLDGNEK 430

Query: 377 NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
            +FLDIACF +G  +D V+ I DA              KSLI+++   +I+MH LL+ MG
Sbjct: 431 AIFLDIACFFKGMDKDVVLKILDACDFNPVIGVQVLIEKSLISIE-NNKIQMHALLQSMG 489

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           R++V ++S   P KR+RLW H+D+  VL  N G +  EGI LD+ K   EI +++ AF K
Sbjct: 490 RQVVCEQS-PKPNKRSRLWLHEDVLAVLTGNKGNDDTEGILLDLPKP-EEIQLSADAFIK 547

Query: 484 MPKLRFLRFYGDKNKCMVSHLEGVPF---AEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           M  LR L           +H+ G PF     +R LEWP CPL ++    CA KLV L M 
Sbjct: 548 MKSLRILLIRN-------AHITGGPFDLPNGLRWLEWPACPLLSMPSGFCARKLVGLNMH 600

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRE 595
            + + +  ++ +    +L  F      ++ DC+ L   PD   + NLE L + G + + E
Sbjct: 601 RSYIREFGEEFKNY--NLLKF-----IDLRDCEFLTGTPDFSAIPNLERLNLGGCSKLVE 653

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           + +S+G L+ ++ L      NL+ +P + +  S  T L    C++L+  PE+   +  L 
Sbjct: 654 VHQSVGNLAKLEFLSFEFCFNLKNLPSTFKLRSLRTLLLTG-CQKLEAFPEIVGEIKWLE 712

Query: 656 ARNC--TSLEKLPAGLSSMSS--VLYVNLCNFLKLDPN 689
             +   T+++ LP+ +++++   VL +  C  L   P+
Sbjct: 713 KLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPH 750



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 51/253 (20%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKG-TTIRELP------E 598
           ++ LPSS+          +  CK L  LP    +LE L+ L ++G + + E P       
Sbjct: 721 IKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYKLEQLKCLFLEGCSMLHEFPANPNGHS 780

Query: 599 SLGR------------------------LSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
           SLG                            +K L LS N +   +P      + L  L 
Sbjct: 781 SLGFPKFRCLDLRNCNLPDITFLKEHNCFPMLKDLDLSGN-DFVSLPPYFHLFNNLRSLK 839

Query: 635 ISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM---------SSVLYVNLCNFLK 685
           +S C ++Q +PELP  +  + AR+C SLE+ P  L+ +         + +  ++  N  K
Sbjct: 840 LSKCMKVQEIPELPLYIKRVEARDCESLERFPQ-LARIFKCNEEDRPNRLHDIDFSNCHK 898

Query: 686 LDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
           L  NE S+ +++  +     ++  ++  ++ PG+EIPKWF ++S   S + +  P R   
Sbjct: 899 LAANE-SKFLENAVLSKKFRQD--LRIEIFLPGSEIPKWFSYRSEEDSLSFQL-PSREC- 953

Query: 746 YNKLISFAFCAVV 758
             ++ +   CA++
Sbjct: 954 -ERIRALILCAIL 965



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 11/102 (10%)

Query: 570 CKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C+ LE  P+   E++ LE L++  T I+ LP S+  L+ +K L L+   NL  +P  I  
Sbjct: 695 CQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYK 754

Query: 627 LSKLTFLFISHCERLQTLPELP---CNLGL-----LSARNCT 660
           L +L  LF+  C  L   P  P    +LG      L  RNC 
Sbjct: 755 LEQLKCLFLEGCSMLHEFPANPNGHSSLGFPKFRCLDLRNCN 796


>gi|224122448|ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 937

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 269/796 (33%), Positives = 423/796 (53%), Gaps = 134/796 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I+TF  DD+L+RG+ IS  L   I+ S ++I+
Sbjct: 3   YDVFLSFRGEDTRKNFTDHLYTALLQAGIRTFRDDDELLRGEKISSQLPKAIQESKVSIV 62

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY + PS +RKQ+ SF   F R  +RF
Sbjct: 63  VFSKGYASSTWCLDELEEILDCRHTTGQIVLPVFYDIGPSDIRKQTGSFAEAFDRHEERF 122

Query: 100 PEKM---KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E+M   ++W+ AL EAA+LSG D + +    ESK +++I  +V  +L+  + +     V
Sbjct: 123 KEEMEKVQKWRKALVEAANLSGLDLHSVANGHESKFVQKIVQEVSSKLNPRYMNVATYPV 182

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  +++I ++L +G+  V  + I+G+ GI K  IA AVFN++   FEGS F LN+R++
Sbjct: 183 GIDSQVKDIIAMLSVGTNEVRTVGIYGMPGIGKTAIAKAVFNQLCHKFEGSCFLLNIRKS 242

Query: 215 -EETGGIKDLQKKLLSE--------LSKDGNMRNIESQLNRLARKKVRIVFDDVTS---- 261
            ++  G+  LQ++LL +           D  +  I+SQ     RK+V ++ DD       
Sbjct: 243 SDQHNGLVQLQEQLLFDSLTGKIWFADVDAGINGIKSQF---CRKRVLVILDDFDQSEQI 299

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR++ITTRD+ +L      KKY  KEL + ++ +LF   AF   H  
Sbjct: 300 HALVGERGWFGPGSRIVITTRDEHLLTQLEVVKKYPAKELNHEESLQLFSWHAFREPHPV 359

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY- 368
             ++EL+   + Y  GVPLAL+V+G YL  RS   W SA+ KL+ IPH +I+  LK S+ 
Sbjct: 360 TEYVELSKVLVDYVGGVPLALEVVGSYLFRRSIPQWTSAIEKLKKIPHHQIQRQLKTSFD 419

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D   D  K++FLDIACF  G  +D V  I D               +SL+ ++   +++M
Sbjct: 420 DLDGDKLKDMFLDIACFFIGMDKDYVGKILDGRGFYPEIDINILRERSLLTVNSENKLQM 479

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD--------- 466
           H+LLRDMGREI+R+   N PGKR+RLW H+D+ +VL K +GTE +EGI LD         
Sbjct: 480 HNLLRDMGREIIRQMDPN-PGKRSRLWLHEDVMEVLGKCSGTEVVEGIMLDAQASKDAFL 538

Query: 467 --------MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWP 518
                    ++ ++++ +++ +F++M  L+ L+F G +   +  H E V  A +  L W 
Sbjct: 539 STTSFAPTTSQASKDVVVSTTSFARMTSLQLLQFSGGQ---LRGHCEHVSEALI-WLCWH 594

Query: 519 QCPLKTL--NICAEKLVSLKMPCTKVEQLWDD--------VQRLPSSLCTFKTP-----I 563
           +C ++TL      + LV L M  +++ +LW +        V  L  S+   KTP      
Sbjct: 595 KCSMRTLPHKFQLDSLVVLDMQHSEIRELWKETKCLNNLKVLDLSHSMFFVKTPNFSGLP 654

Query: 564 TFEIIDCKMLERLPD------ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSN 616
           + E +  +  +RL D      EL+ L +L +KG ++++ LPESL   S ++ L  +   +
Sbjct: 655 SLETLILENCKRLADIHQSIGELKKLVFLNLKGCSSLKNLPESLP--STLETLNTTGCIS 712

Query: 617 LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK----------LP 666
           LE+ PE++ ++  L  +  +  E    +  LP ++G     N   L+K          LP
Sbjct: 713 LEKFPENLGNMQGLIEVQANETE----VHHLPSSIG-----NLKKLKKLFIVLKQQPFLP 763

Query: 667 AGLSSMSSVLYVNLCN 682
              S +SS+  +++ N
Sbjct: 764 LSFSGLSSLTTLHVSN 779



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRH 514
           +G  ++E + L+  K   +IH    +  ++ KL FL   G       S L+ +P      
Sbjct: 651 SGLPSLETLILENCKRLADIHQ---SIGELKKLVFLNLKG------CSSLKNLP------ 695

Query: 515 LEWPQCPLKTLNICAEKLVSL-KMP--------CTKVEQLWDDVQRLPSSLCTFKTPITF 565
            E     L+TLN      +SL K P          +V+    +V  LPSS+   K     
Sbjct: 696 -ESLPSTLETLNTTG--CISLEKFPENLGNMQGLIEVQANETEVHHLPSSIGNLKKLKKL 752

Query: 566 EIIDCKMLERLPDELENLEYLTVKGTTIRELPES-----LGRLSWVKRLILSNNSNLERI 620
            I+  K    LP     L  LT    + R L  S     LG LS ++ L L++N +   +
Sbjct: 753 FIV-LKQQPFLPLSFSGLSSLTTLHVSNRHLSNSNTSINLGSLSSLQDLKLASN-DFSEL 810

Query: 621 PESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS--VLYV 678
           P  I HL KL  L +S C  L  + E+P +L  L A +C SLEK+  GL S+ +  V+ +
Sbjct: 811 PAGIGHLPKLEKLDLSACRNLLFISEIPSSLRTLVALDCISLEKI-QGLESVENKPVIRM 869

Query: 679 NLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF-RHQSMGSSATLK 737
             CN L    N   EI+     K  L +       +  PG+++P WF ++Q   SS+T +
Sbjct: 870 ENCNNLS---NNFKEILLQVLSKGKLPD-------IVLPGSDVPHWFIQYQRDRSSSTFR 919


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 266/773 (34%), Positives = 418/773 (54%), Gaps = 97/773 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRGEDTR  FT HL+       I+TF DD+ L RG  I+  +L  IE S I +I
Sbjct: 25  YEVFLSFRGEDTRYGFTDHLYEAFISHGIRTFRDDEELERGGMIASDILNAIEESKIFVI 84

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           IFSE YA+SRW                      FY VDPS V +QS S+ +    H    
Sbjct: 85  IFSENYATSRWCLDELVRIFECTATEKRLILPVFYHVDPSEVGEQSGSYEKAFVDHEKEA 144

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ-SKNKGLV 154
            +   E++++W+ AL +AA+L+G+D      E++LI+EI + +L+ L++      +K +V
Sbjct: 145 DEEKKEEIQKWRIALRKAANLAGYDLQKYGYETRLIKEIIDVILRELNSKLLLHVSKNIV 204

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G+   ++E++SL+ I S  V  + I+G+GGI K TIA  V+N IS  FE   F  NVRE 
Sbjct: 205 GMNFHLKELKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRER 264

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTSG----- 262
           +++   +  LQK+LL+ ++K   ++  NI   +N    R   K+V ++ DDV        
Sbjct: 265 SKDHSSLLQLQKELLNGVAKGKYLKISNIHEGVNVIRNRFLSKRVLLILDDVDKSEQLQF 324

Query: 263 -----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      SR+IIT+RD+ +L+    +  Y +K L Y ++ +LFC  AF  + L   
Sbjct: 325 LVGEHGWFGPRSRIIITSRDQHLLEEYEMDASYEVKVLDYEESMQLFCLHAFKQNILRKD 384

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +++L++  + Y  G+PLAL++LG +L  +SK  WES ++KL+  P++ ++ VLKIS+D L
Sbjct: 385 YVDLSNDVVNYVNGLPLALEILGSFLFNKSKLEWESTLQKLKRKPNMNVQNVLKISFDGL 444

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDM 422
           D+ +K +FLD+ACF +G +  +V  + D         + K LI L     I MHDL+++M
Sbjct: 445 DEIEKEIFLDVACFFKGWNETDVTRLLDHANIVIRVLSDKCLITLS-HNIIWMHDLVQEM 503

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREIVR+     PGK +RLW  +DI  VL++  GTEAIEGI LDM++ +REI   + AF 
Sbjct: 504 GREIVRQNHPKEPGKWSRLWDPEDICLVLRRKMGTEAIEGIFLDMSR-SREISFTTEAFR 562

Query: 483 KMPKLRFLRFY----------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           +M +LR  + Y           +  K ++     +P  ++R+L W    LK+L  N   E
Sbjct: 563 RMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPSNFHGE 622

Query: 531 KLVSLKMPCTKVEQLWDDVQ-------------RLPSSLCTFKTPITFEIIDCKMLERLP 577
            L+ L +  + +EQLW   +             +L + +  F      E ++ ++ E+L 
Sbjct: 623 NLIELNLKHSNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLD 682

Query: 578 DE------LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
                   L+ L  L ++G   I  LP ++  L  +KRL L + + ++ +P SI HL++L
Sbjct: 683 KVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIA-IDELPSSIHHLTQL 741

Query: 631 TFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSMSSVLYVNL 680
             L I  CE L++LP   C L  L   +   C++L   P  + +M  +  +NL
Sbjct: 742 QTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEWLTELNL 794



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 11/154 (7%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRL 603
           ++++ LPSS+C  K+    ++  C  L   P+ +EN+E+LT   + GT ++ LP S+  L
Sbjct: 750 ENLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEWLTELNLSGTHVKGLPSSIEYL 809

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNC 659
           + + RL L    NL  +P SI  L  L  L +  C  L+T PE    + C + L  +R C
Sbjct: 810 NHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTC 869

Query: 660 TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
             +++LP  +  ++ + ++ L  C  L+  P+ +
Sbjct: 870 --IKELPPSIGYLNHLTFLGLQCCQNLRSLPSSI 901



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 7/155 (4%)

Query: 544  QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESL 600
            Q   +++ LPSS+C  K+    ++  C  LE  P+ +EN+E L    + GT I+ELP S+
Sbjct: 889  QCCQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSI 948

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC- 659
              L+ +  + L    NL  +P SI  L  L  L +  C  L+T PE+  ++  L   +  
Sbjct: 949  EYLNHLTSMRLVEXKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLS 1008

Query: 660  -TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
             TS++KLP+ +  ++ +    L  C  L+  P+ +
Sbjct: 1009 GTSIKKLPSSIGYLNHLTSFRLSYCTNLRSLPSSI 1043



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 41/153 (26%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLG--- 601
            +++ LPSS+C  K      +  C  LE  P+ +E++E    L + GT+I++LP S+G   
Sbjct: 964  NLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLN 1023

Query: 602  -----RLSW-----------------------------VKRLILSNNSNLERIPESIRHL 627
                 RLS+                              ++L LS N N+  IP  I  L
Sbjct: 1024 HLTSFRLSYCTNLRSLPSSIGGLKSLTKLSLSGRPNRVTEQLFLSKN-NIHHIPSVISQL 1082

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
              L  L ISHC+ L+ +P+LP +L  + A  CT
Sbjct: 1083 CNLECLDISHCKMLEEIPDLPSSLREIDAHGCT 1115



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 17/160 (10%)

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTV 588
           L  L++ C K      +++ LPSS+   K+    ++  C  LE  P+ +E++E    L +
Sbjct: 812 LTRLELRCCK------NLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNL 865

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
             T I+ELP S+G L+ +  L L    NL  +P SI  L  L  L + +C  L+  PE+ 
Sbjct: 866 SRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIM 925

Query: 649 CNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKL 686
            N+  L   +   T +++LP      SS+ Y+N    ++L
Sbjct: 926 ENMECLIKLDLSGTHIKELP------SSIEYLNHLTSMRL 959


>gi|359493570|ref|XP_002270429.2| PREDICTED: uncharacterized protein LOC100253289 [Vitis vinifera]
          Length = 2663

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 270/775 (34%), Positives = 401/775 (51%), Gaps = 113/775 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L   +I TF DD+ L RG+ I+  LL  IE S  AII
Sbjct: 21  YDVFLSFRGEDTRKSFTDHLYSALIRNNIHTFRDDEELPRGEEIAPELLKAIEESRSAII 80

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YA S+W                       FY VDPS +R Q+  +G  F+   K 
Sbjct: 81  VFSKTYAHSKWCLEELVKIMKCKEEREQMVVIPIFYHVDPSELRNQTEIYGEAFTHHEKN 140

Query: 99  F----PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 EK+++WK AL +A++L+G+D+   R E++LI++I  +V +    T  +  + +V
Sbjct: 141 ADEERKEKIRKWKIALRQASNLAGYDAKD-RYETELIDKIIENVPRSFPKTL-AVTENIV 198

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G++  +E + SLL IG   V  + ++G+GGI K TI  A++N+IS  FE      +VR+ 
Sbjct: 199 GMDYRLERLISLLEIGLNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKE 258

Query: 214 -AEETGGIKDLQKKLLSEL---SKDGNMRNIESQL----NRLARKKVRIVFDDVTS---- 261
             E +GG+  LQ++LL+++   ++   +RN+   +    ++L+ K+V +  DDV      
Sbjct: 259 STENSGGLLKLQQQLLNDILGTTRKIVLRNVHEGIKEIRDKLSSKRVLVFLDDVDELTQL 318

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+IITTR K +L      K Y +++L + +A +LFC +AF   HL 
Sbjct: 319 EHLIGKHNWFGPGSRIIITTRKKDLLTR-HEMKMYEVEKLNFHEALQLFCLYAFKQHHLK 377

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             + +L+ + ++YA G+PLALKVLG  L G+    W+S +RKL  +P++EI +VLKIS+D
Sbjct: 378 EGYGDLSHQVVRYADGLPLALKVLGSLLFGKRLSDWKSELRKLGKVPNMEIVKVLKISFD 437

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMH 416
            LD +QK +FLDIACF +G   + V  I D S             +  I +     I MH
Sbjct: 438 GLDYTQKMIFLDIACFFQGGDVEAVSRILDGSGCEAESGINVLVDRCFITILEDNTIDMH 497

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DLL  MG+ IV +E  N PG+R+RLW H DIY+VLK+NTGTE IEGI   M+  + +I  
Sbjct: 498 DLLAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFFHMD-TSEQIQF 556

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEG--VPFAEVRHLEWPQCPLKTL--NICAEKL 532
              AF +M +LR L      + C+    E    P  ++  L W    L++L  N     L
Sbjct: 557 TCKAFKRMNRLRLLIL---SHNCIEQLPEDFVFPSDDLTCLGWDGYSLESLPPNFHPNDL 613

Query: 533 VSLKMPCTKVEQLW--------------DDVQR-----------------LPSSLCTFKT 561
           V L +  + +++LW              +D Q+                 L   +   K 
Sbjct: 614 VFLGLSNSNIKRLWKGNMCLRNLRYINLNDSQQLIELPNFSNVPNLEELNLSGCIILLKV 673

Query: 562 PITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLE 618
                +  C  L   P     +  LE L++  T I+ELP S+  L  ++ L L N  NLE
Sbjct: 674 HTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLE 733

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
            +P SI +L  L  L +  C +L  LPE   +L  +      SL  L   L S+S
Sbjct: 734 GLPNSICNLRFLEVLSLEGCSKLDRLPE---DLERMPCLEVLSLNSLSCQLPSLS 785



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 6/115 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLGRLS 604
            +++ LP+S+  FK+  +    DC  L+  P+ LEN+E    L + GT I+ELP S+  L+
Sbjct: 1661 NLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLN 1720

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
             ++ L L    NL  +PESI +L  L  L +++C +L  LP+   NLG L +  C
Sbjct: 1721 RLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKLPQ---NLGRLQSLKC 1772



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 23/187 (12%)

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIR--HLSKLTFLFISHCERLQTLPELPCN 650
            +R++P    RL   + L L++ SNL  +PE+I    LSKL  L +SHC+ L  +PELP +
Sbjct: 1320 LRQIPVLPSRL---QHLNLADCSNLVSLPEAICIIQLSKLRVLELSHCQGLLQVPELPPS 1376

Query: 651  LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL--SEIVKDGWMKHSLYEER 708
            L +L   +CT LE     LSS S +L V+L    K    +L       + +++ S +   
Sbjct: 1377 LRVLDVHSCTCLEV----LSSPSCLLGVSLFKCFKSTIEDLKYKSSSNEVFLRDSDFIGN 1432

Query: 709  GIKKSMYFPGN-EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF 767
            G+   +  PG+  IPKW R+Q  G+  T+   P      N  +  A C V        Y 
Sbjct: 1433 GV--CIVVPGSCGIPKWIRNQREGNHITMDL-PQNCYENNDFLGIAICCV--------YA 1481

Query: 768  RHKSGED 774
             H   ED
Sbjct: 1482 PHDECED 1488



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 12/128 (9%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+ +  FK+  +    DC  L+  P+    +ENL  L + GT I+ELP S+ RL+
Sbjct: 1103 NLESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHLNGTAIKELPSSIERLN 1162

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L L    NL  +PESI +L  L  L ++ C +L  LP+   NLG L      SL++
Sbjct: 1163 RLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQ---NLGRLQ-----SLKR 1214

Query: 665  LPA-GLSS 671
            L A GL+S
Sbjct: 1215 LRARGLNS 1222



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 44/243 (18%)

Query: 541 KVEQLWDD---VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG----TTI 593
           K+E+L  D   ++ LPSS+   +      + +CK LE LP+ + NL +L V      + +
Sbjct: 697 KLERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKL 756

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPE-------------SIRHLSKLTFLFISHCER 640
             LPE L R+  ++  +LS NS   ++P               I  LS L  L +SHC++
Sbjct: 757 DRLPEDLERMPCLE--VLSLNSLSCQLPSLSEEGGTLSDMLVGISQLSNLRALDLSHCKK 814

Query: 641 LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL-----SEIV 695
           +  +PELP +L LL   +      +   L  M S     L N LK    +L     S +V
Sbjct: 815 VSQIPELPSSLRLLDMHS-----SIGTSLPPMHS-----LVNCLKSASEDLKYKSSSNVV 864

Query: 696 KDGWMKHSLYEERGIKKSMYFPGN-EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAF 754
              ++  S +   GI   +  PG+  IP W R+Q   +  T+   P      N  +  A 
Sbjct: 865 ---FLSDSYFIGHGI--CIVVPGSCGIPNWIRNQRKENRITMDL-PRNCYENNDFLGIAI 918

Query: 755 CAV 757
           C V
Sbjct: 919 CCV 921



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 38/292 (13%)

Query: 580  LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +LE + ++   I E  +P  + +LS ++ L L  N     IP  I  LS+L  L + +
Sbjct: 1816 LYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNL-FRSIPAGINQLSRLRLLVLGN 1874

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD 697
            C+ L+ +P LP +L +L    C  LE       + S +L+ +L N  K        +++D
Sbjct: 1875 CQELRQIPALPSSLRVLDIHLCKRLE-------TSSGLLWSSLFNCFK-------SLIQD 1920

Query: 698  GWMKHSLYEERGIKKSMYFPGN-EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
               K    E+   + ++    +  IP W  H   G+    K  P      + L+ F    
Sbjct: 1921 LECKIYPLEKPFARVNLIISESCGIPDWISHHKKGAEVVAKL-PQNWYKNDDLLGFVL-Y 1978

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCN 816
             V +P       ++S E   +G  Y    ++     GH    F+ K+ +  S HV++   
Sbjct: 1979 CVYYP-----LDNESEETLENGATYF---EYGLTLRGHEIQ-FVDKLQFYPSFHVYVVPC 2029

Query: 817  SFGGEY----FGPNYDEFSFRIHCSFHFPPYLERGE---VKKCGIHFVYAQD 861
             +   Y        Y    +R   +  F  YL RG+   V++CGIH +YA D
Sbjct: 2030 MWMIYYPKHEIEEKYHSNKWR-QLTASFCGYL-RGKAVKVEECGIHLIYAHD 2079



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 27/123 (21%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLS 604
            +++ LP+S+  FK+  +    DC  L+  P+ LEN+E L    + GT I+ELP S     
Sbjct: 2559 NLESLPTSIREFKSLKSLFGSDCSQLQYFPEILENMENLRELHLNGTAIKELPSS----- 2613

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
                               I HL++L  L +  C+ L TLP   CNL  L   N  + +K
Sbjct: 2614 -------------------IEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVLNVCAPDK 2654

Query: 665  LPA 667
              A
Sbjct: 2655 ANA 2657



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 6/103 (5%)

Query: 582  NLEY--LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            N+E+  L +KG TI  LP  +   S    L L    NLE +P SIR    L  LF S C 
Sbjct: 2525 NVEHRKLCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCS 2582

Query: 640  RLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
            +LQ  PE+  N+  L     N T++++LP+ +  ++ +  +NL
Sbjct: 2583 QLQYFPEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNL 2625



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 582  NLEY--LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            N+E+  L +KG TI   P      S    L L    NLE +P SI     L  LF S C 
Sbjct: 1627 NVEHRKLCLKGQTISLPPIECA--SEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSDCS 1684

Query: 640  RLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
            +LQ  PE+  N+  L     N T++++LP+ +  ++ +  +NL
Sbjct: 1685 QLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNL 1727


>gi|255547496|ref|XP_002514805.1| ATP binding protein, putative [Ricinus communis]
 gi|223545856|gb|EEF47359.1| ATP binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 301/820 (36%), Positives = 429/820 (52%), Gaps = 106/820 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFTSHL+  L  K + TF DD+ L RG  ISQ+LL  I  S IA+I
Sbjct: 12  YDVFLSFRGEDTRKNFTSHLYAALCQKGVITFRDDEELERGKTISQALLQAIHGSKIAVI 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      F  V+P  VRKQ+  FG+ F++   RF
Sbjct: 72  VFSRDYASSSWCLDELAEIHKCRKEKGQIVMPVFCNVNPYEVRKQAAGFGKAFAKHELRF 131

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATF--QSKNKGLV 154
               +K++RW+ A++E A+L+G+DS + R ES+LI+EI  +VL +L  T    S  K  V
Sbjct: 132 KNDVQKVQRWRAAISELANLAGWDS-LDRHESELIQEIVKEVLSKLRKTSLESSAAKNFV 190

Query: 155 GVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G+   + E+   L +G  + V  + I G+GGI K TIA  V  ++S  FEGS F  NVRE
Sbjct: 191 GMNSRLVEMSMCLDMGQLDDVQFIGICGMGGIGKTTIARFVHEELSSQFEGSSFLANVRE 250

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------ 261
            EE  G+  LQK+LLSE+  D N+        +    NRLA K+V I+ DDV        
Sbjct: 251 VEEKRGLVHLQKQLLSEILLDRNITICNAFGGMTEISNRLAHKRVLIILDDVNQLDQLKM 310

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+I+T+RD+ +LK    +K YR++ L   +A  LFC  AF  DH    
Sbjct: 311 LAGMHDWFGKGSRIIVTSRDEHLLKCHGVDKIYRVEGLGRDEALHLFCLKAFRNDHPIED 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +EL+++ + Y  G+PLAL V G +L G+S   W SA+ +L+ IP+ EI + L IS+D L
Sbjct: 371 FLELSNQFVNYCNGLPLALDVFGSFLFGKSLSEWRSALDRLKEIPNQEILDKLNISFDGL 430

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           ++ +K +FLDIACF  GE RD V  + D+             SKSLI +    RI MHDL
Sbjct: 431 EEMEKKLFLDIACFFNGEDRDYVYEVLDSCGLYPDFGISVLVSKSLITISK-ERIWMHDL 489

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+++GR+IVR+ES   PGKR+RLW +KDI  VL  +TGTE IE I LD  +   E  +++
Sbjct: 490 LQELGRDIVRRESQEEPGKRSRLWLYKDIRHVLSNDTGTEQIEAIVLDSCEQEDE-QLSA 548

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
             F  M +LR L+         + +L      ++R+LEW + P K L  +   ++L  L 
Sbjct: 549 KGFMGMKRLRLLKLRNLHLSQGLEYLSN----KLRYLEWDRYPFKFLPSSFQPDELTELH 604

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IRE 595
           M C+ +E+LW  ++ L   L       +  ++     + +P    NLE L ++G T + E
Sbjct: 605 MRCSIMERLWKGIKPL-KMLKVIDLSYSVNLLKTMDFKDVP----NLESLNLEGCTRLFE 659

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL-TFLFIS-------HCERLQTLPEL 647
           + +SLG L+ +K        N+  I  S   L+KL  FL  S             TLP L
Sbjct: 660 VHQSLGILNRLKL-------NVGGIATSQLPLAKLWDFLLPSRFLPWKNQNPLAVTLPSL 712

Query: 648 PC--NLGLLSARNCTSLE-KLPAGLSSMSSVLYVNLC--NFLKLDPNELSEIVKDGWMKH 702
               +L  L    C  +E  LP  LS    +   NL   +F  + P+ +S + K    + 
Sbjct: 713 SVLRSLKSLDLSYCNLMEGALPNDLSCFPMLKTFNLSGNDFFSI-PSSISRLTKLEDFRF 771

Query: 703 SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPR 742
           +       K+   FP   +P    + SM     L++  PR
Sbjct: 772 A-----DCKRLQAFPN--LPSSILYLSMDGCTVLQSLLPR 804



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 34/218 (15%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
           +D   +PSS+        F   DCK L+  P+   ++ YL++ G T+ +           
Sbjct: 751 NDFFSIPSSISRLTKLEDFRFADCKRLQAFPNLPSSILYLSMDGCTVLQ----------- 799

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP 666
                        +P +I    KL  L +  C+RLQ  P L  ++  LS    TS E   
Sbjct: 800 -----------SLLPRNISRQFKLENLHVEDCKRLQLSPNLSSSILHLSVDGLTSQE--- 845

Query: 667 AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL--YEERGI-----KKSMYFPGN 719
              S+ SS+ +VN    +++   + S   +     H L  +  +G+     + S+   GN
Sbjct: 846 TQTSNSSSLTFVNCLKLIEVQSEDTSAFRRLTSYLHYLLRHSSQGLFNPSSQISICLAGN 905

Query: 720 EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           EIP WF +QS+GSS  LK + P     NK + FA   V
Sbjct: 906 EIPGWFNYQSVGSS--LKLQLPPFWWTNKWMGFAISIV 941


>gi|356506581|ref|XP_003522058.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1166

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 267/774 (34%), Positives = 402/774 (51%), Gaps = 104/774 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FTSHL+  L    +  F DD+ L RG+ IS SL   IE S ++++
Sbjct: 34  YDVFLSFRGEDTRASFTSHLYTALHNAGVFVFKDDETLSRGNKISPSLQLAIEESRVSVV 93

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA SRW                      FY VDPS VR Q+  FG+ F  L  R 
Sbjct: 94  VFSRNYAESRWCLKELEKIMECHRTTGQVVVPVFYDVDPSEVRHQTGHFGKAFRNLENRL 153

Query: 100 ----PEKMKRWKNALTEAADLSGFDSNVI---------------------RPESKLIEEI 134
                E+++RW   L EAA +SG   +++                     R ES+ I+ I
Sbjct: 154 LKVEEEELQRWWKTLAEAAGISGLSVDLMMSWKEALREAAGISRVVVLNYRNESEAIKTI 213

Query: 135 ANDVLKRLDATFQSKNKGLVGVECSIEE-IESLLCIGSEGVCKLRIWGIGGISKITIAGA 193
             ++ + L+ T        VG+E  ++E IE L    S  V  L +WG+GGI K TIA A
Sbjct: 214 VENITRLLNKTELFVADNPVGIEPRVQEMIELLDQKQSNDVLILGMWGMGGIGKTTIAKA 273

Query: 194 VFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGN--MRNIESQL----NR 246
           ++NKI R+FEG  F  ++RE  E+  G   LQ++LL ++ K+ N  +RN+ES       R
Sbjct: 274 IYNKIGRNFEGKSFLAHIREVWEQDAGQVYLQEQLLFDIKKETNTKIRNVESGKVMLKER 333

Query: 247 LARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELV 290
           L  K+V ++ DDV                 SGSR+IITTRD  +L+    +K +RMK + 
Sbjct: 334 LRHKRVLLILDDVNKLHQLNVLCGSREWFGSGSRIIITTRDMHILRGRRVDKVFRMKGMD 393

Query: 291 YADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMR 350
             ++ +LF   AF         IEL+   + Y+ G+PLAL+VLG YL       W++ + 
Sbjct: 394 EDESIELFSWHAFKQASPREDFIELSRNLVAYSAGLPLALEVLGSYLFDMEVIEWKNVLE 453

Query: 351 KLEIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA--------- 400
           KL+ IP+ E++E LKISYD L DD++K +FLDIACF  G  R++VI I +          
Sbjct: 454 KLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFIGMDRNDVIHILNGCGLCAENGI 513

Query: 401 ----SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
                +SL+ +D   ++ MHDLLRDMGREI+R ++     +R+RLW H+D   VL K TG
Sbjct: 514 RVLVERSLVTVDYKNKLGMHDLLRDMGREIIRSKTPMELEERSRLWFHEDALDVLSKETG 573

Query: 457 TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE 516
           T+AIEG++L + + N +  +++ AF +M KLR L+  G +      +L      ++R L 
Sbjct: 574 TKAIEGLALKLPRNNTKC-LSTKAFKEMKKLRLLQLAGVQLVGDFKYLS----KDLRWLC 628

Query: 517 WPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLE 574
           W   PL  +  N+    LVS+++  + V  LW + Q +       K  I   +     L 
Sbjct: 629 WHGFPLACIPTNLYQGSLVSIELENSNVNLLWKEAQVME------KLKI-LNLSHSHYLT 681

Query: 575 RLPD--ELENLE-YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
           + PD   L NLE  L +    + E+  ++G L+ V  +   +  +L ++P SI  L  L 
Sbjct: 682 QTPDFSNLPNLEKLLLIDCPRLSEISYTIGHLNKVLLINFQDCISLRKLPRSIYKLKSLK 741

Query: 632 FLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNF 683
            L +S C ++  L E    +  L+    + T++ ++P  +     + Y++LC +
Sbjct: 742 ALILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKRIGYISLCGY 795


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 276/772 (35%), Positives = 393/772 (50%), Gaps = 133/772 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL   L  K I TF DD+ L RG  IS+ L+  I+ S  AI 
Sbjct: 20  YHVFLSFRGEDTRKGFTDHLCAALERKGITTFRDDKDLERGQVISEKLINAIKDSMFAIT 79

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           + S  YASS W                     FY VDPS VR Q   F   F +  ++F 
Sbjct: 80  VLSPDYASSTWCLDELQMIMECSNKGLEVLPVFYGVDPSDVRHQRGCFEESFRKHLEKFG 139

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              +++ RW++A T+ A  SG+DS   + E+ L+E IA  + ++L     S  + LVG+ 
Sbjct: 140 QHSDRVDRWRDAFTQVASYSGWDSKG-QHEALLVESIAQHIHRKLVPKLPSCTENLVGIA 198

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +EE+  LL +G   V  + IWG+GGI K TIA AV+  I   F+ + F  NVRE  E 
Sbjct: 199 SKVEEVNKLLGMGLNDVRFIGIWGMGGIGKTTIARAVYEAIQCEFQTTCFLENVREISEA 258

Query: 218 GGIKDLQKKLLSELSKDGN-MRNI----ESQLNRLARKKVRIVFDDVTS----------- 261
            G+  +Q++LLS LS   N   N+    ++  N L RKKV +V DDV             
Sbjct: 259 NGLVHIQRQLLSHLSISRNDFHNLYDGKKTIQNSLCRKKVLLVLDDVNEINQLENLAGKQ 318

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSRVIITTRDK  L     ++ Y +  L   +A  +FC  AF GD     +++L+
Sbjct: 319 DWFGPGSRVIITTRDKHWLITHGVHQPYEVGMLFQNEALNVFCLKAFKGDKPQEGYLDLS 378

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            + ++YA G+PLAL+VLG YL GRS ++W SA++ +   P  EI++ LKISY+SLD  +K
Sbjct: 379 KEVVEYAGGLPLALEVLGSYLYGRSVDLWHSAIKNIRSAPLREIQDKLKISYESLDAMEK 438

Query: 377 NVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD-LFYRIRMHDLLRDM 422
           N+FLDI+CF +G  RD+VI+I +               +SLI LD +  ++ MHDLL++M
Sbjct: 439 NIFLDISCFFKGMKRDKVINILENCGYHPEITIQVLIDRSLITLDRVNNKLGMHDLLQEM 498

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR IV +ES N PGKR+RLW  +DI +VL KN GTE I  + L+  +   E   ++ AFS
Sbjct: 499 GRNIVIQESPNDPGKRSRLWSKEDIDRVLTKNKGTEKISSVVLNSLQ-PYEARWSTEAFS 557

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKMPCT 540
              +++ L          +S L     + ++ L W  CPLKTL    +  ++V +K+  +
Sbjct: 558 MATQIKLLSLNEVHLPLGLSCLP----SSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHS 613

Query: 541 KVEQLWD-----------------DVQRLPS-----------------------SLCTFK 560
           ++E LW                  +++RLP                        SL    
Sbjct: 614 QLELLWQGINFMENLKYLNLKFSKNLKRLPDFYGVPNLEKLILKGCASLTEVHPSLVHHN 673

Query: 561 TPITFEIIDCKMLERLPDEL--------------------------ENLEYLTVKGTTIR 594
             +   + DCK LE LP++L                          ENL  L ++GT +R
Sbjct: 674 KVVLVNLEDCKSLEALPEKLEMSSLKELILSGCCEFKFLPEFGESMENLSILALQGTALR 733

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            L  SLGRL  +  L L +  +L  +P++I  L+ L  L IS C +L  LP+
Sbjct: 734 NLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGCSKLCRLPD 785



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 24/182 (13%)

Query: 582  NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            NL Y  +   +I   P    +L+ +  L L+ N N   IP SI  LSKL  L ++ CE+L
Sbjct: 864  NLSYCDLSEESI---PHYFLQLTSLVSLDLTGN-NFVTIPSSISELSKLELLTLNCCEKL 919

Query: 642  QTLPELPCNLGLLSARNCTSLEKL---PAGLSSM-SSVLYVNLCNFLKLDPNELSEIVKD 697
            Q LPELP ++  L A NC SLE     PA   S+ +S + ++L       P E    ++ 
Sbjct: 920  QLLPELPPSIMQLDASNCDSLETPKFDPAKPCSLFASPIQLSL-------PREFKSFMEG 972

Query: 698  GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
              +  + ++       M  PG+EIP WF  Q   S +  K   P     ++ + FA C +
Sbjct: 973  RCLPTTRFD-------MLIPGDEIPSWFVPQR--SVSWEKVHIPNNFPQDEWVGFALCFL 1023

Query: 758  VV 759
            +V
Sbjct: 1024 LV 1025


>gi|255567754|ref|XP_002524855.1| ATP binding protein, putative [Ricinus communis]
 gi|223535818|gb|EEF37479.1| ATP binding protein, putative [Ricinus communis]
          Length = 673

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 243/616 (39%), Positives = 353/616 (57%), Gaps = 71/616 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL++ L    I  F DD+ L RG++IS  LL  I+ S ++I+
Sbjct: 23  YDVFLSFRGEDTRKNFTDHLYNALLQAGIHAFRDDKHLSRGNHISSELLKAIQESKVSIV 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASSRW                      FY V PS VRKQ+ SF     R  ++F
Sbjct: 83  VFSKGYASSRWCLDELVKIMQCKNTAGQIVVPIFYDVSPSDVRKQTGSFAEALQR-HEQF 141

Query: 100 PE--KMKRWKNALTEAADLSGFD-SNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            E  K+  W+NAL EAA+LSG+D  NV    ESK I ++  DVL +L     +  K  VG
Sbjct: 142 SEREKVNDWRNALLEAANLSGWDLQNVANGHESKNIRKVVEDVLSKLSRNCLNVAKHPVG 201

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++  I+++  LL +G++ V  + I G+GGI K TIA AVFN++   FE   F  NV+E +
Sbjct: 202 IDSRIKDVIVLLSVGTKDVRMIGIHGMGGIGKTTIAKAVFNQLCDGFEVRCFLSNVKEIS 261

Query: 215 EETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS------- 261
           E+  G+  LQ++LL  + K  ++      R I     R   K++ +V DD+         
Sbjct: 262 EQPNGLIQLQEQLLRAVLKPKSLQIGSVDRGINMIRERFRHKRLLVVIDDLDHMKQFNAL 321

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IIT+RD+ +L     ++KY++KEL + ++ +LF   AF   H    +
Sbjct: 322 MGDRTWFGLGSRLIITSRDEHLLAQLEVDEKYQVKELDHNESLELFSWHAFRKTHPVGDY 381

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL++  + Y  G+PLAL+VLG YLC RS   W SA+RKL+ IPH +I+  L++S+D+LD
Sbjct: 382 VELSNGVVDYGGGLPLALEVLGSYLCKRSIPEWTSALRKLKRIPHHQIQRKLRLSFDTLD 441

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           D + K++FLDIACF  G  RD  + I D               +SL+ +D   ++ MHDL
Sbjct: 442 DDKVKDIFLDIACFFIGTDRDYAVKILDGCGFFPEIGISVLIQRSLVTVDSKNKLSMHDL 501

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           LRDMGREIVR+ S N PGKR+RLW  +D+  VL    GTEA+EG+ LD+   +R+  +++
Sbjct: 502 LRDMGREIVRELSPNQPGKRSRLWFQEDVLDVLSNQKGTEAVEGLVLDVES-SRDAVLST 560

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            +F+ M  LR L+     NK  ++        E+R L W  CPLK L  N   + LV L 
Sbjct: 561 ESFANMRYLRLLKI----NKVHLTGCYEHLSKELRWLCWHSCPLKFLPHNFQLDNLVILD 616

Query: 537 MPCTKVEQLWDDVQRL 552
           M  + ++++W +++ L
Sbjct: 617 MQYSNIKEVWKEIRVL 632


>gi|193584702|gb|ACF19651.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa]
          Length = 1125

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 265/775 (34%), Positives = 403/775 (52%), Gaps = 106/775 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR +F SHL   L    I  F DDQ L RGD +S +LL  I  S I++I
Sbjct: 41  HDVFLSFRGEDTRTSFISHLSASLQNAGIIVFKDDQSLERGDRVSSTLLYAIGESRISVI 100

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA S W                      FY VDPS VR Q+  FG+ F +   R 
Sbjct: 101 VFSINYADSSWCLQELLKIMECHKTIGQVVLPVFYHVDPSEVRHQTGDFGKSFQKSLNRL 160

Query: 100 PEK-------------------------MKRWKNALTEAADLSGFDSNVIRPESKLIEEI 134
            ++                         + +W++AL EA+ L+G      R E+++I++I
Sbjct: 161 SQEEESMVLKWGNNVLPGDGIRAVNQDTVLKWRDALCEASGLAGCVVLNSRNENEVIKDI 220

Query: 135 ANDVLKRLDATFQSKNKGLVGVECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGA 193
             +V + LD T        VGVE  ++++  LL    +  V  L +WG+GGI K TIA A
Sbjct: 221 VENVTRLLDKTDLFVANNPVGVESRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTIAKA 280

Query: 194 VFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGN--MRNIESQLN----R 246
           ++NKI R+FEG  F  N+RE  E+  G  +LQ++L+ ++ K+    ++N+ES ++    R
Sbjct: 281 IYNKIGRNFEGRSFIANIREVWEKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILKGR 340

Query: 247 LARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELV 290
           L  K+V +V DDV+                 GSR+IITTRDK VL+    ++ Y MKE+ 
Sbjct: 341 LCHKRVLLVLDDVSKLDQLNALCGSCKWFAPGSRIIITTRDKHVLRGNRVDRIYIMKEMD 400

Query: 291 YADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMR 350
             ++ +LF   AF          E++   + Y+ G+PLAL+VLG YL  R    W   + 
Sbjct: 401 ETESLELFSWHAFKQTSPTEDFSEISKNVVMYSGGLPLALEVLGSYLFDREVLEWVCVLE 460

Query: 351 KLEIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA--------- 400
           KL+IIP+ ++ E LKISYD L DD++K+ FLDIACF  G  R++VI I +          
Sbjct: 461 KLKIIPNHQLHEKLKISYDGLNDDTEKSTFLDIACFFIGMDRNDVIQILNGCGFFAEIGI 520

Query: 401 ----SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
                +SL+ +D   ++ MHDLLRDMGREI+R++S   P +R+RLW  +D+  VL ++TG
Sbjct: 521 SVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPMEPEERSRLWFQEDVLDVLSEHTG 580

Query: 457 TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE 516
           T+A+EG++L +   N +   ++ AF  M KLR L+  G +      +L       +R L 
Sbjct: 581 TKAVEGLTLKLPGHNAQ-RFSTKAFENMKKLRLLQLSGVQLDGDFKYLS----RNLRWLH 635

Query: 517 WPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLE 574
           W   PL  L  N     +VS+++  + V+ LW ++QR+       +      +     L 
Sbjct: 636 WNGFPLTCLPSNFYQRNIVSIELENSNVKLLWKEMQRM-------EQLKILNLSHSHYLT 688

Query: 575 RLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
           + PD   + NLE L +K    + E+ +S+G L  V  + L +  +L  +P +I  L  L 
Sbjct: 689 QTPDFSNMPNLEKLILKDCPRLSEVSQSIGHLKKVLLISLKDCISLCNLPRNIYSLKSLK 748

Query: 632 FLFISHCERLQTLP---ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
            L +S C ++  L    E   +L  L A N T + K+P  +    S+ +++LC +
Sbjct: 749 TLILSGCLKIDKLEEDLEQMKSLTTLMAGN-TGITKVPFSVVRSKSIGFISLCGY 802


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 265/761 (34%), Positives = 389/761 (51%), Gaps = 84/761 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  LL  I+ S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGYLYHELQRQGIRTFRDDPQLERGTAISPELLTAIKQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S +YA+S W                     FY VDPSHVR Q   F   F    ++F 
Sbjct: 79  VLSPKYATSTWCLLELSKIIECMEERGTILPIFYEVDPSHVRHQRGRFAEAFQEHEEKFG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           E  K    W++ALT+ A L+G+ S   R E++LI EI   +  ++  +      ++ LVG
Sbjct: 139 EGNKEVEGWRDALTKVASLAGWTSKDYRYETELIREIVQALWSKVHPSLTVFGSSEKLVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +EEI+ LL I +  V  + IWG+GG+ K T+A  V+ KIS  FE   F  NVRE  
Sbjct: 199 MHTKLEEIDVLLDIETNDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLANVREVS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------- 262
            T G+  LQK++LS + K+ N +  N+ S +  + R    K V +V DDV          
Sbjct: 259 ATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLA 318

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTRD+ VL      K Y +K L   +A +LF   AF     +  + 
Sbjct: 319 GEKDWFGLRSRIIITTRDRHVLVTHDIEKPYELKGLEEDEALQLFSWKAFRKHEPEEDYA 378

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           E +   ++ A G+PLALK LG +LC RS + WESA+ KL+  P   + ++LK+SYD LD+
Sbjct: 379 EQSKSVVRIAGGLPLALKTLGSFLCKRSPDAWESALAKLQNTPEKTVFDLLKVSYDGLDE 438

Query: 374 SQKNVFLDIACF---LEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLLR 420
            +K +FLDIACF    E +   E++  +D            KSL+ +     I MHDL+R
Sbjct: 439 MEKKIFLDIACFSSQCEAKLIIELLYSYDVCTRIAIDVLVEKSLLTISSNTEIGMHDLIR 498

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG EIVR++S   PG R+RLW   DI+ V  KNTGTE  EGI L ++K+  E   N  A
Sbjct: 499 EMGCEIVRQQSPKEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLHKL-EEADWNPEA 557

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           FSKM  L+ L  +  +       L       +R L+W   P K+L       +L  L +P
Sbjct: 558 FSKMCNLKLLYIHNLRLSLGPKFLPDA----LRILKWSWYPSKSLPPGFQPHELAELSLP 613

Query: 539 CTKVEQLWDDVQRL-PSSLCTFKTP-ITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           C++++ LW+ ++ + P  L       +    +D   + +L  E  + +      + + E 
Sbjct: 614 CSEIDHLWNGIKFIVPRGLGVGPNQGVNLGEVDLGEVRKLVREERDEKNWRWVVSVLEE- 672

Query: 597 PESLGRLSW------VKRLILSNNSNLERIPE--SIRHLSKLTFLFISHCERLQTLPELP 648
               GR  W      +K + LS + NL R P+   I++L KL     ++  ++     L 
Sbjct: 673 ----GRKRWDKYLGKLKSIDLSYSINLTRTPDFTGIQNLEKLVLEGCTNLVKIHPSIALL 728

Query: 649 CNLGLLSARNCTSLEKLPAGLS-SMSSVLYVNLCNFLKLDP 688
             L + + RNC S++ LP+ ++        V+ C+ LK+ P
Sbjct: 729 KRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIP 769



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 93/171 (54%), Gaps = 13/171 (7%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLG 652
            E+P  +G LS +K L L  N N   +P SIR LSKL  + + +C RLQ LPELP   +  
Sbjct: 869  EIPNDIGSLSSLKYLELGGN-NFVSLPASIRLLSKLRHIDVENCTRLQQLPELPPASDRI 927

Query: 653  LLSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGI 710
            L++  NCTSL+    P  LS +S   +++  N L     + S       +K  + E    
Sbjct: 928  LVTTDNCTSLQVFPDPPDLSRVSE-FWLDCSNCLSC---QDSSYFLHSVLKRLVEETPCS 983

Query: 711  KKSMYF--PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             +S+ F  PG+EIP+WF +QS+G S T K   P  A  +K I FA CA++V
Sbjct: 984  FESLKFIIPGSEIPEWFNNQSVGDSVTEKL--PLDACNSKWIGFAVCALIV 1032


>gi|255561510|ref|XP_002521765.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538978|gb|EEF40575.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1018

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 305/983 (31%), Positives = 476/983 (48%), Gaps = 162/983 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+V LSF+ ED  +NF SHL+  LSL+ I T  +     G  +   +   I+ S + +++
Sbjct: 25  YNVILSFKDED--NNFVSHLYRKLSLEGIHTVEN-----GGKLEFPV--AIQESRLIVVV 75

Query: 62  FSERYASSR------------W---------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE+YA S             W          F+ VDP  +  Q       F++  + F 
Sbjct: 76  LSEKYACSAQCLDELVKITDCWEKTRKMVVPIFHNVDPDDLGNQRGKVAEAFAKHEENFK 135

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           EK+K WK+ALT+ A + G+DS +   E+  IE+I  D+  +L  T  +    LVG+   I
Sbjct: 136 EKVKMWKDALTKVASICGWDS-LQWEETIFIEQIVRDISDKLIYTSSTDTSELVGMGSHI 194

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
            E+E  LC+   GV  + IWG+GGI K TIA  +++ +S  FE   F  NV+E  E  G 
Sbjct: 195 AEMEKKLCLELNGVHMVGIWGMGGIGKTTIAKLIYDMLSSQFEVHCFLSNVKEHFEKHGA 254

Query: 221 KDLQKKLLSEL---SKDGNMRNIESQLNRLAR-----------------KKVRIVFDDVT 260
             LQ+KLLS +    +  N     +  N + R                 K++  +  +  
Sbjct: 255 AVLQQKLLSNVLSERRSLNAWTFNASFNVIKRALHHRKVLLVLDDVDDYKQLEALAREPN 314

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IIT+RD  +L +      Y ++ L    A +LF   AF  ++    ++ELT 
Sbjct: 315 WFGEGSRIIITSRDYHLLDSHGVESIYEVQYLKTDHALQLFSLHAFKQNNAKIEYLELTK 374

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           +   YA+G+PLA+KV G +L GR+   W+S   KL  IP + I +VL+IS++ LD++Q++
Sbjct: 375 QFSSYAKGLPLAVKVFGSFLNGRNILEWQSVKNKLAKIPCIGIHDVLRISFEGLDETQRD 434

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           VFLDIACF  G  ++    I                 K+LI +D    + +HDLLR+MG 
Sbjct: 435 VFLDIACFFNGLSKEFARDILGGCGFFPDIAFAVLKDKALITID-DNELLVHDLLREMGH 493

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIV +ES   PGKR+RLW   DI+ VL K+TGT+ +EGI LD  KV R++H++S AF+KM
Sbjct: 494 EIVYQESKEEPGKRSRLWIPDDIFHVLTKSTGTKIVEGIFLDTFKV-RKMHLSSEAFAKM 552

Query: 485 PKLRFLRFYGDKNKCMVS-HL--EGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
             LR L+FY   +K M   HL  EG+ +  + +R   W   P K+L  +  AE L+ L +
Sbjct: 553 RNLRMLKFYYTGSKYMNKVHLPDEGLHYMSSNLRLFHWEGYPSKSLPSSFHAENLIELNL 612

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD-----ELENLEYLTVK 589
             + +EQLW  VQ L          +  + ID    + L R+PD      LE +E  T +
Sbjct: 613 VGSNLEQLWTGVQHL----------VNLKRIDLSYSRHLTRIPDLSKAQNLERMELTTCQ 662

Query: 590 G----------------------TTIRELPESLGRLSWVKRLILSNNSNLERIPE---SI 624
                                  T +R LP  +  L+ +K L+L++ SNL ++PE    I
Sbjct: 663 NLAAVSSSVQCLNKLVFLDLSDCTNLRSLPGGIN-LNSLKALVLTSCSNLAKLPEISGDI 721

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM--SSVLYVNLCN 682
           R L           +RL+ L ++P  + +L A +CTSLE +P  + S+    V Y +  N
Sbjct: 722 RFLCLSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEAIPR-IKSLWEPDVEYWDFAN 780

Query: 683 FLKLDPNELSEIVKDG-W-------MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
              LD  E S + +D  W           +++ +G      FPG+E+P+ F ++ + SS 
Sbjct: 781 CFNLDQKETSNLAEDAQWSFLVMETASKQVHDYKGNPGQFCFPGSEVPESFCNEDIRSSL 840

Query: 735 TLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH 794
           T       P+   +L+  A C V+              E+ +  +    CC    KS   
Sbjct: 841 TFML----PSNGRQLMGIALCVVL------------GSEEPYSVSKVRCCCKCHFKSTNQ 884

Query: 795 ---LYSWFLGKISY----VESDHVFLGCNSFGGEYFGPNYD-----EFSFRIHCSFHFPP 842
              +++   G I++    + SDH+ L   S+       N       E SF    S+ F  
Sbjct: 885 DDLIFTSQYGSINHENVTLNSDHILLWFESWKSRSDKLNNSFTECHEASFEFCISYGFKK 944

Query: 843 YLERGEVKKCGIHFVYAQDSADH 865
           ++    V+K G+H +YA++++++
Sbjct: 945 HI---NVRKYGVHLIYAEETSEN 964


>gi|357469163|ref|XP_003604866.1| NBS resistance protein-like protein [Medicago truncatula]
 gi|355505921|gb|AES87063.1| NBS resistance protein-like protein [Medicago truncatula]
          Length = 1791

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 264/771 (34%), Positives = 398/771 (51%), Gaps = 79/771 (10%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
            +YDVFLSFRGED+R  F SH+   L    I TF  DDQ+ RGD IS SLL  I  S I+I
Sbjct: 525  LYDVFLSFRGEDSRAKFMSHIFSSLQNAGIHTFRDDDQIQRGDQISVSLLRAIGQSRISI 584

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            II S  YA+SRW                      FY VDPS VR Q   FG+ F  L   
Sbjct: 585  IILSTNYANSRWCMLELVKIMEIGRTRGLVVLPVFYEVDPSEVRHQEGQFGKSFEDLIST 644

Query: 99   FP--EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                E  K  WK  L +   ++GF     R ES  I+ I   +   LD T     +  VG
Sbjct: 645  ISVDESTKSNWKRDLIDIGGIAGFVLKDSRNESADIKNIVEHITHLLDRTELFVAEHPVG 704

Query: 156  VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            V+  +E    LL I  SE V  L IWG+GG  K TIA A++N+I   FEG  F LN+RE 
Sbjct: 705  VQPRVEAATKLLNIQYSEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREF 764

Query: 215  EETG-GIKDLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS------ 261
             ET   +  LQ++LL ++ K     +R+IES  N    RL++ +V IV DDV        
Sbjct: 765  WETNINLVSLQQQLLCDVYKTTTFKIRDIESGKNTLKERLSQNRVLIVLDDVNELDQLKA 824

Query: 262  ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR+IITTRD  +L++C  ++ Y ++E+  +++ +LF   AF        
Sbjct: 825  LCGSREWFGPGSRIIITTRDMHLLRSCRVDEVYTIEEMGDSESLELFSWHAFNQPSPTKD 884

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
                +   I Y+  +PLAL+VLG YL       W+  + KL+ IPH ++++ LK+S+D L
Sbjct: 885  FATHSTDVIAYSGRLPLALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKKLKVSFDGL 944

Query: 372  DD-SQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
             D ++K +FLDIACF  G  R++ I I + S             +SL+ +D   ++RMHD
Sbjct: 945  KDVTEKQIFLDIACFFIGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHD 1004

Query: 418  LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
            LLRDMGR+IV +ES   P  R+RLW  ++++ ++ K+ GTEA++G++L+  + N  + +N
Sbjct: 1005 LLRDMGRQIVYEESPFDPETRSRLWRREEVFDIISKHKGTEAVKGLALEFPRKN-TVSLN 1063

Query: 478  SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP--LKTLNICAEKLVSL 535
            + AF KM KLR L+  G +      +L G    E+R L W   P            LVS+
Sbjct: 1064 TKAFKKMNKLRLLQLSGVQLNGDFKYLSG----ELRWLYWHGFPSTYTPAEFQQGSLVSI 1119

Query: 536  KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IR 594
            ++  + ++Q+W   Q L  +L       ++++I+      +P    NLE L +K    + 
Sbjct: 1120 ELKYSSLKQIWKKSQLL-ENLKILNLSHSWDLIETPDFSFMP----NLEKLVLKDCPRLT 1174

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
             +  S+G L  +  + L++ ++L+++P SI  L  L  L +S C ++  L E    +  L
Sbjct: 1175 AVSRSIGSLHKLLLINLTDCTSLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESL 1234

Query: 655  SA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
                 + T++ K+P  +  + ++ Y++LC F     +    +V+  WM  S
Sbjct: 1235 KTLIADKTAITKVPFSIVRLRNIGYISLCGFEGFSRDVFPFLVR-SWMSPS 1284



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 241/511 (47%), Gaps = 90/511 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKS-IKTFIDDQ-LIRGD-NISQSLLGTIEASCIA 58
           Y+V+LSF  +D   +F + ++  L+ KS    F DD+ L  GD  I  S+L  IE   +A
Sbjct: 16  YNVYLSFCHQDAA-SFATGIYTALNRKSRFHVFWDDEKLGSGDRGIPTSILNVIEDCKVA 74

Query: 59  IIIFSERYASSRWFFYR---------------VDPSHVRKQSH--SFG---RHFSRLRKR 98
           +I+FS  Y +SR                    V P      +H  SFG     F     R
Sbjct: 75  VIVFSRNYVNSRSCLQEFEKITECCLTTSGLIVLPVLYDGLNHYSSFGTVEETFHDFVDR 134

Query: 99  F---------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK 149
                      +K   W  A+T+A   SG    VI        E   DV++ +  T  +K
Sbjct: 135 IWIKETTSEEKDKFMSWVAAVTKATTYSG----VIDFADSYGREYVVDVVESVTRTV-NK 189

Query: 150 NKGLVG------VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE 203
            + L G      V+  ++++  LL   S     + IWG+ GI K TIA A++N+I  +FE
Sbjct: 190 KRDLFGAFYTASVKSGVQDVIHLLK-QSRSPLLIGIWGMAGIGKSTIAEAIYNQIGPYFE 248

Query: 204 GSYFALNVREA-EETGGI------KDLQKKLLS--ELSKDGNMRNIESQLN----RLARK 250
             Y   +VRE  +  GG+        LQ+KLLS   +  +  +  IES  N    +L  K
Sbjct: 249 HKYLLDDVREVWKRDGGLVSFDGPVSLQEKLLSYRGIPTEIKIGTIESGKNILKEKLHNK 308

Query: 251 KVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADA 294
           +V +V D+V                  GS++IITTRD+ +LK    +  Y++KEL  +++
Sbjct: 309 RVLLVLDNVDKLEQLKSLCGNRDWFGPGSKIIITTRDRHLLKEHRVDHIYKVKELDESES 368

Query: 295 HKLFCQWAFGGDHLDASHI-ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE 353
            +LF   AF           EL+ + + Y++G+PLALK LG +L G+    W+  +R LE
Sbjct: 369 IELFNWAAFNQATTSREGFGELSRQLVAYSRGLPLALKALGGFLHGKEVLEWKRVLRSLE 428

Query: 354 I--IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS---------- 401
               P  EI +VL+ S+  L   +K++FLDIACF     +++V+   + S          
Sbjct: 429 TFSFPDQEILQVLETSFADLSGEEKHIFLDIACFFNRMDQNDVLHTLNRSTQCSALLISL 488

Query: 402 ---KSLINLDLFYRIRMHDLLRDMGREIVRK 429
              KSL+ +D   ++ MH LL+ M R+I++K
Sbjct: 489 LEDKSLVTIDENNKLEMHGLLQAMARDIIKK 519


>gi|356560709|ref|XP_003548631.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1067

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 256/755 (33%), Positives = 396/755 (52%), Gaps = 95/755 (12%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           DVFL+FRGEDTR  F SHL+  LS   I TFID +L +G  + + LL  I+ S I+I++F
Sbjct: 14  DVFLNFRGEDTRKTFVSHLYAALSNAGINTFIDHKLRKGTELGEELLAVIKGSRISIVVF 73

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S  YASS W                      FY VDPS VR Q+ +FG+    L ++   
Sbjct: 74  SANYASSTWCLHELVEIIYHRRAYGQVVVPVFYDVDPSDVRHQTGAFGQRLKALMQKSKP 133

Query: 102 ---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
                  WK+AL EA+DL G+D+   R E  L+++I  D+ ++LD    S  +  VG+E 
Sbjct: 134 IDFMFTSWKSALKEASDLVGWDARNWRSEGDLVKQIVEDISRKLDTRLLSIPEFPVGLES 193

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EE 216
            ++E+   +   S+  C + IWG+GG+ K T+A  ++NKI R F  S F  N+RE    +
Sbjct: 194 RVQEVIEFINAQSDTGCVVGIWGMGGLGKTTMAKVIYNKIHRRFRHSSFIENIREVCEND 253

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT---------------- 260
           + G   LQ++L+S++        I     +L  ++  IV DDVT                
Sbjct: 254 SRGCFFLQQQLVSDILNIRVGMGIIGIEKKLFGRRPLIVLDDVTDVKQLKALSLNREWTG 313

Query: 261 SGSRVIITTRDKQ---VLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
           +G   IITTRD +   VLK        R+KE+   ++ +LF   AF   H     I+L+ 
Sbjct: 314 TGCVFIITTRDVRLLNVLKPYHRVHVCRIKEMDENESLELFSWHAFRQAHPREDLIKLSM 373

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             + Y  G+PLAL+VLG YLC R+KE WES + KL  IP+ +++E L+ISYD LD  +KN
Sbjct: 374 DIVAYCGGLPLALEVLGSYLCERTKEEWESVLAKLRKIPNDQVQEKLRISYDDLDCEEKN 433

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDI  F  G+ R  V  I                 +SLI L+   +I+MH+LLRDMGR
Sbjct: 434 IFLDICFFFIGKDRVNVTEILKGCDLHAEIGITILVERSLIKLEKNNKIKMHNLLRDMGR 493

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR+ S+  P KR+RLW H+++  +L ++TGT+AIEG++L + + +  +H N+ AF KM
Sbjct: 494 EIVRQSSLEEPEKRSRLWVHQEVLDLLLEHTGTKAIEGLALKLQRTS-GLHFNTKAFEKM 552

Query: 485 PKLRFLRF----------YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVS 534
            KLR L+           Y +KN   +  L+G P   +     P+      N+  E L+S
Sbjct: 553 KKLRLLQLDHVQLVGDYEYLNKNLRWLC-LQGFPLQHI-----PE------NLYQENLIS 600

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT 592
           +++  + +  +W +    P  L   K      +   + L   PD  +L NL  L +K   
Sbjct: 601 IELKYSNIRLVWKE----PQLLQRLK---ILNLSHSRNLMHTPDFSKLPNLAKLNLKDCP 653

Query: 593 -IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-- 649
            + E+ +S+G L+ +  + L + ++L  +P  I  L  L  L  S C ++  L E     
Sbjct: 654 RLSEVHQSIGDLNNLLVINLMDCTSLSNLPRRIYQLKSLQTLIFSGCSKIDMLEEDIVQM 713

Query: 650 -NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
            +L  L A++ T+++++P  +  + +++Y++LC  
Sbjct: 714 ESLTTLIAKD-TAVKEMPQSIVRLKNIVYISLCGL 747


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 291/843 (34%), Positives = 428/843 (50%), Gaps = 156/843 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFR EDTR+NFT HL   L    IKTF DDQL RG+ I   LL TIE S I+I++
Sbjct: 20  FEVFLSFRSEDTRNNFTDHLFVNLDGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKRF 99
           FS+ YA S+W                      FY VDP  V+KQ+ SFG  FS   R   
Sbjct: 80  FSKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHVDPCDVQKQTGSFGEAFSIHERNVD 139

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVEC 158
            +K++RW+++LTEA++LSGF  N    ESK I+EI N + KR +++     N+ +VG++ 
Sbjct: 140 VKKVQRWRDSLTEASNLSGFHVNDGY-ESKHIKEIVNLIFKRSMNSKLLHINEDIVGMDF 198

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++E++SLL      +  + I+GIGGI K TIA  V+N+I   F G+ F  +VRE    G
Sbjct: 199 RLKELKSLLSSDLNDIRVVGIYGIGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKG 258

Query: 219 GIKDLQKKLLSEL-SKDGNMRNIESQLN----RLARKKVRIVFDDVT------------- 260
               LQ++LL ++   D    NI   +N    RL  KKV IV DDV              
Sbjct: 259 CQLQLQQQLLHDIVGNDEKFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVAGSPK 318

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS +IITTRD+ +L        ++  EL Y +A +LF Q AF  +     +++L++
Sbjct: 319 WFGPGSTIIITTRDQHLLVEYGVTISHKATELHYEEALQLFSQHAFKQNVPKEDYVDLSN 378

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             ++YAQG+PLALKVLG  L G + + W+SA  K +  P  EI +VL+IS+D LD SQK 
Sbjct: 379 CMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKSKKNPMKEINDVLRISFDGLDPSQKE 438

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           VFLDIACF +GE +D V  I D               + L+ + L   I+MHDL+++MG 
Sbjct: 439 VFLDIACFFKGECKDFVSRILDGCNLFATCNIRVLRDRCLVTI-LDNVIQMHDLIQEMGW 497

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
            IVR+E    P K +RLW   DIY    K    + I+ ISLD+++ +REI  N+  F KM
Sbjct: 498 AIVREECPGDPCKWSRLWDVDDIYDAFSKQEEMQNIQTISLDLSR-SREIQFNTKVFPKM 556

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAE--------------VRHLEWPQCPLKTL--NIC 528
            KLR L+ Y + +       +G+P  E              +R+L W +C L +L  N  
Sbjct: 557 KKLRLLKIYCNDH-------DGLPREEYKVLLPKDFEFPHDLRYLHWQRCTLTSLPWNFY 609

Query: 529 AEKLVSL--------------------------------KMP---------------CTK 541
            + L+ +                                KMP               CT+
Sbjct: 610 GKHLLEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTR 669

Query: 542 VEQLWDDV-----------------QRLPSSLCTFKTPITFEIIDCKMLE---RLPDELE 581
           + +L   +                 + LP+S+C  K+     +  C  LE    + +++E
Sbjct: 670 LRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSEITEDME 729

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            LE L ++ T I ELP S+  +  +K L L N  NL  +P SI +L+ LT L + +C +L
Sbjct: 730 QLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKL 789

Query: 642 QTLPE----LPCNLGLLSARNCTSL-EKLPAGLSSMSSVLYVNLC-NFLKLDPNELSEIV 695
             LP+    L C L +L    C  + E++P  L  +SS+ ++N+  N ++  P  ++++ 
Sbjct: 790 HNLPDNLRSLQCCLTMLDLGGCNLMEEEIPNDLWCLSSLEFLNVSENHMRCIPAGITQLC 849

Query: 696 KDG 698
           K G
Sbjct: 850 KLG 852



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTI--RELPESL 600
           +++  LP+S+       +  + +C  L  LPD L +L+     L + G  +   E+P  L
Sbjct: 763 ENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPNDL 822

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             LS ++ L +S N ++  IP  I  L KL  L ++HC  L+ + ELP +LG + A  C 
Sbjct: 823 WCLSSLEFLNVSEN-HMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSLGWIEAHGCP 881

Query: 661 SLE 663
           SLE
Sbjct: 882 SLE 884


>gi|82542033|gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 268/790 (33%), Positives = 419/790 (53%), Gaps = 95/790 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I+ F  DD L RG+ IS  LL  I+ S I+I+
Sbjct: 52  YDVFLSFRGEDTRKTFTDHLYTALVQAGIRAFRDDDDLPRGEEISDHLLRAIQESKISIV 111

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF + F +  KR
Sbjct: 112 VFSKGYASSRWCLNELVEILECKKRKTGQIVLPIFYDIDPSDVRKQTGSFAKAFDKHEKR 171

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL +AA+LSG   N +    E+K I+ I NDVL +L        + LVG
Sbjct: 172 FEEKLVKEWRKALEDAANLSGRSLNDMANGHEAKFIKGIINDVLNKLRRECLYVPEHLVG 231

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++ +  +I   L   ++ V  + I G+ GI K T+A  VFN++   FEGS F  N+ E+ 
Sbjct: 232 MDLA-HDIYDFLSTATDDVRIVGIHGMPGIGKTTLAKVVFNQLCYRFEGSCFLSNINESS 290

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++SK    N+  ++       +RL RK+V +V DDV         
Sbjct: 291 KQVNGLVPLQKQLLHDISKQDVANINCVDRGKVMIKDRLCRKRVLVVADDVAHLEQQNAL 350

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  +L+   A++ Y+++EL   ++ +LF   AF        +
Sbjct: 351 MGERSWFGPGSRVIITTRDSNLLRE--ADRTYQIEELKPDESLQLFSCHAFKDSKPAKDY 408

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           I+L+  A+ Y  G+PLAL+V+G  L G++++ W+  + KL  IP+ +I+  L+IS+D+LD
Sbjct: 409 IKLSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPNHDIQGRLRISFDALD 468

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ V  +  A               +SLI +D   +I MHD
Sbjct: 469 GEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHGRSLIKVDAIGKITMHD 528

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGRE+VR+ S   PGKR R+W+ +D + VL++  GT+ +EG++LD+ + ++   ++
Sbjct: 529 LLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDV-RASKAKSLS 587

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKL 532
           +  F++M  L  L+  G        HL G   +   E+  + W +CPLK    +  A+ L
Sbjct: 588 AGLFAEMKCLNLLQING-------VHLTGSFKLLSKELMWICWHRCPLKDFPSDFTADYL 640

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-T 591
             L M  + +++LW   +++ + L  F    +  ++    L        +LE L +KG +
Sbjct: 641 AVLDMQYSNLKELWKG-KKILNRLKIFNLSHSRNLVKTPNLHS-----SSLEKLILKGCS 694

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ E+ +S+G  + +  L L    +L+ +PESIR++  L  + I  C +L+ LPE   ++
Sbjct: 695 SLVEVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDM 754

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS-EIVKDG------WMKHSL 704
             L+      + K    LSS+  + YV   +     P   S  ++  G      W+  S 
Sbjct: 755 KFLTELLADGI-KTEQFLSSIGQLKYVKRLSLRGCSPTPPSCSLISAGVSILKCWLPTSF 813

Query: 705 YEERGIKKSM 714
            E R +K  M
Sbjct: 814 TEWRLVKHLM 823



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 90/236 (38%), Gaps = 79/236 (33%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LP S+   K+  T +I  C  LE+LP+ + ++++LT     G    +   S+G+L +
Sbjct: 720 LKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADGIKTEQFLSSIGQLKY 779

Query: 606 ---------------------------------------VKRLILSN------------- 613
                                                  VK L+LSN             
Sbjct: 780 VKRLSLRGCSPTPPSCSLISAGVSILKCWLPTSFTEWRLVKHLMLSNCGLSDRATNCVDF 839

Query: 614 ------------NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
                        +    +P  I  L KL+ L +  CE L ++P+LP +L LL A +C S
Sbjct: 840 SGLFSLEKLDLSENKFSSLPYGIGFLPKLSHLVVQTCEYLVSIPDLPSSLCLLDASSCKS 899

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
           LE+      +M +  +    NF  L+ +EL E+    WM    Y   G   S + P
Sbjct: 900 LER------AMCNRGHGYRINF-SLEHDELHEM--PDWMS---YRGEGCSLSFHIP 943


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 289/813 (35%), Positives = 421/813 (51%), Gaps = 97/813 (11%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
            MYDVFLSFRG+DTR+NFTSHL+  L  + I  ++DD +L RG  I  +L   IE S  + 
Sbjct: 348  MYDVFLSFRGKDTRNNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSF 407

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            IIFS  YASS W                      FY VDPS   +++  F  H    ++ 
Sbjct: 408  IIFSRDYASSPWCLDELVKIVQCMKEMDHTVLPVFYDVDPSETYEKA--FVEHEQNFKEN 465

Query: 99   FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              EK++ WK+ L+   +LSG+D    R ES+ I+ IA  +  +L  T    +K LVG++ 
Sbjct: 466  L-EKVQIWKDCLSTVTNLSGWDVRN-RNESESIKIIAEYISYKLSVTMPV-SKNLVGIDS 522

Query: 159  SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
             +E +   +         + I G+GGI K T+A  V+++    F+GS F  NVRE   E 
Sbjct: 523  RLEILNGYIGEEVGEAIFIGICGMGGIGKTTVARVVYDRFHWQFKGSCFLANVREVFVEK 582

Query: 218  GGIKDLQKKLLSE-LSKDGNM----RNIESQLNRLARKKVRIVFDDVTS----------- 261
             G + LQ++LLSE L +  N+    R IE    RL  KK+R+V DDV             
Sbjct: 583  DGPRRLQEQLLSEILMERANICDSSRGIEMIKRRLQHKKIRVVLDDVDDHKQLESLAAES 642

Query: 262  -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                 GSR+IIT RD+QVL      + Y  ++L   DA  LF Q AF  D      +EL+
Sbjct: 643  KWFGPGSRIIITGRDRQVLTRNGVARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELS 702

Query: 317  DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
             + + YA G+PLAL+V+G ++ GRS   W SA+ +L  IP  EI +VL+IS+D L + +K
Sbjct: 703  KQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNEIPDREIIDVLRISFDGLHELEK 762

Query: 377  NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
             +FLDIACFL+G  +D +I I D+              KSLI++    ++ MH+LL+ MG
Sbjct: 763  KIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSR-DQVWMHNLLQIMG 821

Query: 424  REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            +EIVR ES   PG+R+RLW + D+   L  NTG E IE I LDM  + +E   N  +FSK
Sbjct: 822  KEIVRCESPEEPGRRSRLWTYADVCLALMDNTGKEKIEAIFLDMPGI-KESQWNMESFSK 880

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTK 541
            M +LR L+     N   +S        +++ LEW   PLK+L +    ++LV L M  + 
Sbjct: 881  MSRLRLLKI----NNVQLSEGPEDISNKLQFLEWHSYPLKSLPVGLQVDQLVELHMANSS 936

Query: 542  VEQLWD--------DVQRLPSSLCTFKTPITFEIID--------CKMLERLPDEL---EN 582
            +EQLW          +  L +SL   KTP    I +        C  L  +   L   + 
Sbjct: 937  IEQLWYGYKSAVNLKIINLSNSLNLIKTPDFTGIPNLKNLILEGCTSLSEVHPSLAHHKK 996

Query: 583  LEYLT-VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--SHCE 639
            L+Y+  V   +IR LP +L  +  +K  IL   S LE+ P+ + +++ LT L +  +   
Sbjct: 997  LQYMNLVNCKSIRILPNNL-EMGSLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGIT 1055

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKD 697
            +L +       LGLLS  NC +LE +P+ +  + S+  ++L  C+ LK  P +L ++   
Sbjct: 1056 KLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGKVESL 1115

Query: 698  GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM 730
              +        G    +  PGNEIP WF HQ +
Sbjct: 1116 EELDCRSNPRPGF--GIAVPGNEIPGWFNHQKL 1146


>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 279/790 (35%), Positives = 401/790 (50%), Gaps = 127/790 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR NFT HL+  LS   +  F DD+ L +G  I+  LL  IE S  ++I
Sbjct: 26  YHVFLSFRGEDTRKNFTGHLYSGLSRFKLLVFKDDEKLEKGKVIAPELLKAIEQSMFSVI 85

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS W                      FY V+PS VRKQ+ SF   F++  +++
Sbjct: 86  VLSKNYASSSWCLDELAKIIECGDQKGQKIFPVFYDVEPSDVRKQTGSFQDDFAKHEEKY 145

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E   K+++W+ A+T+ A+LSG+ S   R ES++IEEI   +   L  TF S ++ LVG+
Sbjct: 146 RENIDKVRKWRAAMTQVANLSGWTSKN-RNESEIIEEIVQKIDYELSQTFSSVSEDLVGI 204

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +  +  +L  G   V  + I G+GGI K TIA  V++KI   FEGS F  NVRE  E
Sbjct: 205 DSRVRVVSDMLFGGQNDVRIIGICGMGGIGKSTIARVVYDKIRCEFEGSCFLANVREGFE 264

Query: 217 TGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS--------- 261
             G   LQK+LLSE+ ++ + +       I    NRL  +KV ++ DDV +         
Sbjct: 265 KHGAVPLQKQLLSEILREKSPKIWDPEKGIAEIKNRLQNRKVLVILDDVDNLKQLHFLAV 324

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IIT+RDK +L     +  Y  +EL   DA  L  + AF  D     + E
Sbjct: 325 DWKWFLPGSRIIITSRDKNLLSTHAVDGIYEAEELNDDDALVLLSRKAFKKDQPIEGYWE 384

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L    + +A+G+PLA +VL   LCGRS + WES +++L  IP+ ++  VLK+S+D L++ 
Sbjct: 385 LCKSVLGHARGLPLAARVLASSLCGRSMDFWESFIKRLNEIPNRDVMAVLKLSFDGLEEL 444

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           +K +FLDIACF +G ++D+V  I +               KSLI +     + MHDLL+ 
Sbjct: 445 EKKLFLDIACFFKGMNKDQVTRILNQCGFHANYGIQILQDKSLICVS-NDTLSMHDLLQA 503

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD----------MNKVN 471
           MGRE+VR+ES   PG+R+RLW  KD++ VL KNTGTE IE I+LD          M K  
Sbjct: 504 MGREVVRQESTAEPGRRSRLWASKDVFHVLGKNTGTEEIESIALDWANPEDVEGTMQKTK 563

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
           R    N+  FSKM +LR LR    +N C  S  E +   E+R LEW   P K L  +   
Sbjct: 564 RSA-WNTGVFSKMSRLRLLRI---RNACFDSGPEYLS-NELRFLEWRNYPSKYLPSSFQP 618

Query: 530 EKLVSLKMPCTKVEQL------WDDVQRLPSSLCTF--KTP------------------- 562
           E LV + +  + + QL       D ++ +  S   +  KTP                   
Sbjct: 619 ENLVEVHLCYSNLRQLRLGNKILDSLKVIDLSYSEYLIKTPNFTGIPNLERLILQGCRRL 678

Query: 563 -------------ITFEIIDCKMLERLPDELEN---LEYLTVKGTT-IRELPESLGRLSW 605
                        I   ++DC+ L  LP  +     LE L + G + ++E PE  G    
Sbjct: 679 SEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKC 738

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSL 662
           +++L L   S +E +P SI++L  L  L +  C++L  LP     L  L       C+ L
Sbjct: 739 LRKLCLDQTS-IEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSEL 797

Query: 663 EKLPAGLSSM 672
           E LP     +
Sbjct: 798 ENLPENFGQL 807



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 127/277 (45%), Gaps = 41/277 (14%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P  +G LS +++L LS N  +  +P SI  LS L FL +  C+ LQ+LPELP NL    
Sbjct: 896  VPNDIGYLSSLRQLNLSRNKFVS-LPTSIDQLSGLQFLRMEDCKMLQSLPELPSNLEEFR 954

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW--MKHSLYEE--RGIK 711
               CTSLEK+         +  +N   +L ++   LSE   D W  M  +L  +  +G  
Sbjct: 955  VNGCTSLEKMQFS----RKLCQLNYLRYLFINCWRLSE--SDCWNNMFPTLLRKCFQGPP 1008

Query: 712  K-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKY 766
                  S+  PG+EIP WF HQS GSS +++T PP     ++ + +A CA + +P     
Sbjct: 1009 NLIESFSVIIPGSEIPTWFSHQSEGSSVSVQT-PPHSHENDEWLGYAVCASLGYP----- 1062

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE--SDHVFLGCNSFGGEYFG 824
                    D+  NV+          +G+       ++   E  SDH++         YF 
Sbjct: 1063 --------DFPPNVFRSPMQCFFNGDGNESESIYVRLKPCEILSDHLWF-------LYFP 1107

Query: 825  PNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
              +  F    H  F F     + +V KCG+  VY QD
Sbjct: 1108 SRFKRFDR--HVRFRFEDNCSQTKVIKCGVRLVYQQD 1142


>gi|357478613|ref|XP_003609592.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
 gi|355510647|gb|AES91789.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
          Length = 871

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 264/771 (34%), Positives = 398/771 (51%), Gaps = 79/771 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGED+R  F SH+   L    I TF  DDQ+ RGD IS SLL  I  S I+I
Sbjct: 19  LYDVFLSFRGEDSRAKFMSHIFSSLQNAGIHTFRDDDQIQRGDQISVSLLRAIGQSRISI 78

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           II S  YA+SRW                      FY VDPS VR Q   FG+ F  L   
Sbjct: 79  IILSTNYANSRWCMLELVKIMEIGRTRGLVVLPVFYEVDPSEVRHQEGQFGKSFEDLIST 138

Query: 99  FP--EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               E  K  WK  L +   ++GF     R ES  I+ I   +   LD T     +  VG
Sbjct: 139 ISVDESTKSNWKRDLIDIGGIAGFVLKDSRNESADIKNIVEHITHLLDRTELFVAEHPVG 198

Query: 156 VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           V+  +E    LL I  SE V  L IWG+GG  K TIA A++N+I   FEG  F LN+RE 
Sbjct: 199 VQPRVEAATKLLNIQYSEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREF 258

Query: 215 EETG-GIKDLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS------ 261
            ET   +  LQ++LL ++ K     +R+IES  N    RL++ +V IV DDV        
Sbjct: 259 WETNINLVSLQQQLLCDVYKTTTFKIRDIESGKNTLKERLSQNRVLIVLDDVNELDQLKA 318

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTRD  +L++C  ++ Y ++E+  +++ +LF   AF        
Sbjct: 319 LCGSREWFGPGSRIIITTRDMHLLRSCRVDEVYTIEEMGDSESLELFSWHAFNQPSPTKD 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
               +   I Y+  +PLAL+VLG YL       W+  + KL+ IPH ++++ LK+S+D L
Sbjct: 379 FATHSTDVIAYSGRLPLALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKKLKVSFDGL 438

Query: 372 DD-SQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
            D ++K +FLDIACF  G  R++ I I + S             +SL+ +D   ++RMHD
Sbjct: 439 KDVTEKQIFLDIACFFIGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHD 498

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGR+IV +ES   P  R+RLW  ++++ ++ K+ GTEA++G++L+  + N  + +N
Sbjct: 499 LLRDMGRQIVYEESPFDPETRSRLWRREEVFDIISKHKGTEAVKGLALEFPRKN-TVSLN 557

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP--LKTLNICAEKLVSL 535
           + AF KM KLR L+  G +      +L G    E+R L W   P            LVS+
Sbjct: 558 TKAFKKMNKLRLLQLSGVQLNGDFKYLSG----ELRWLYWHGFPSTYTPAEFQQGSLVSI 613

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIR 594
           ++  + ++Q+W   Q L  +L       ++++I+      +P    NLE L +K    + 
Sbjct: 614 ELKYSSLKQIWKKSQLL-ENLKILNLSHSWDLIETPDFSFMP----NLEKLVLKDCPRLT 668

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            +  S+G L  +  + L++ ++L+++P SI  L  L  L +S C ++  L E    +  L
Sbjct: 669 AVSRSIGSLHKLLLINLTDCTSLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESL 728

Query: 655 SA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
                + T++ K+P  +  + ++ Y++LC F     +    +V+  WM  S
Sbjct: 729 KTLIADKTAITKVPFSIVRLRNIGYISLCGFEGFSRDVFPFLVR-SWMSPS 778


>gi|357513247|ref|XP_003626912.1| Resistance protein [Medicago truncatula]
 gi|355520934|gb|AET01388.1| Resistance protein [Medicago truncatula]
          Length = 1925

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 258/783 (32%), Positives = 405/783 (51%), Gaps = 105/783 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFL+FRGEDTR +F SHLH  LS   I TF+DD+ L +G+ +   LL  IE S I+I
Sbjct: 12  VYDVFLNFRGEDTRSSFVSHLHAALSNAGINTFLDDKKLEKGEELGPELLRAIEVSRISI 71

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FS+ Y +S W                      FY VDPS +R Q   +G+      KR
Sbjct: 72  IVFSKSYITSSWCLKELEQIMKCRKNYGQVVMPIFYHVDPSALRHQKDGYGKALQATAKR 131

Query: 99  FPEKMKR-------WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK 151
            P   +R       WK ALTEAA++SG+D N    E +L+  I  DV ++L++   S  +
Sbjct: 132 RPSGGERRKYALSNWKIALTEAANISGWDINKSSNEGELMPLIIEDVRRKLNSRLMSITE 191

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
             VG+   ++++   +   S  VC + IWG+GG  K T A  ++NKI R F    F  N+
Sbjct: 192 FPVGLHTRVQQVIQFIEKQSSKVCMIGIWGMGGSGKTTTARDIYNKIHRKFVDHSFIENI 251

Query: 212 REA--EETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS-------- 261
           RE   +E  GI  LQ++LLS +     ++ IE    R  RKK  IV DDV++        
Sbjct: 252 REVYEKENRGITHLQEQLLSNV-----LKTIE---KRFMRKKTLIVLDDVSTLEQVEALC 303

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS +I+T+RD ++LK    ++ Y +KE+    + +LFC  AF          
Sbjct: 304 INCKCFGAGSVLIVTSRDVRILKLLKVDRIYNIKEMDENKSLELFCWHAFREPSPKGDFS 363

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-D 372
           EL+ + + Y +G+PLAL+V+G YL  R+ + W S + KLE IP  ++ E L+ISYD L +
Sbjct: 364 ELSRRIVVYCRGLPLALEVIGSYLRDRTIQEWISVLSKLERIPDDKVHEKLRISYDGLKN 423

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D++K++FLDI CF  G+ R  V  I D               +SL+ ++   ++ MH LL
Sbjct: 424 DTEKDIFLDICCFFIGKDRAYVSEIIDGCDFYAGIGITVLIERSLLKIEKSNKLGMHSLL 483

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA------IEGISLDMNKVNRE 473
           RDMGREIVRK SI  PGKR+RLW HKD ++VL + T   A      +EG+ L M++   +
Sbjct: 484 RDMGREIVRKRSIKEPGKRSRLWFHKDAHKVLTEKTPRSAMVDIKTVEGLVL-MSQNTND 542

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           + + +  F +M  LR L+ +       ++   G    E+R L W     + +  +     
Sbjct: 543 VCIETNTFKEMKNLRLLKLH----HVDLTGAFGFLSKELRWLHWQGFTHEYIPDDFFLGN 598

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           LV  ++  + ++Q+W++ + +       K      +   K L   PD  +L NLE L +K
Sbjct: 599 LVVFELKHSNIKQVWNETKLM-------KNLKILNLSHSKYLTSTPDFSKLPNLEKLIMK 651

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
              ++ E+ +S+G L  +  + L + ++L  +P+ I  L  LT L IS C ++  L E  
Sbjct: 652 DCPSLSEVHQSIGGLRNLLLINLKDCTSLSNLPKKINQLKSLTTLIISGCSKIDKLEE-- 709

Query: 649 CNLGLLSARNCTSL-------EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
              G++   + T+L       +++P  +  + S+ Y++LC +  L  +    I++  WM 
Sbjct: 710 ---GIVQMESLTTLVIKDTGVKEVPYSVVRLKSIGYISLCGYEGLSEDVFHSIIQ-SWMS 765

Query: 702 HSL 704
            ++
Sbjct: 766 PTM 768



 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 241/756 (31%), Positives = 385/756 (50%), Gaps = 115/756 (15%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
            ++DVF+SFRGEDTR  F SHL+  L+   I T+ D QL +G  +   L   IE S I+I+
Sbjct: 1089 IHDVFISFRGEDTRKTFVSHLYAALTNAGINTYTDSQLHKGVELGPELSQGIEWSHISIV 1148

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR--------- 90
            +FS+RY  S W                      FY VDPS VR Q   FG+         
Sbjct: 1149 VFSKRYTESCWCLNELKKIMECYRTHGHVVVPVFYDVDPSVVRYQKGDFGKALLSTAKKI 1208

Query: 91   HFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN 150
            +F    +R    + RW +ALTEAA+L+G+D N  R E +L+++I  DVL++LD+ F    
Sbjct: 1209 YFHSGEERLEYVLSRWTSALTEAANLAGWDVNNCRNEGELMQQIVADVLEKLDSAFLPIT 1268

Query: 151  KGLVGVEC----------SIEEIESLLCI-----GSEGVCKLRIWGIGGISKITIAGAVF 195
             GL  + C          +    E  L I         VC + IWG+GG+ K T A AV+
Sbjct: 1269 -GLEKLNCGGRFGKTNAANYAHFEYYLVIEFIVTQPSKVCMMGIWGMGGLGKTTTAKAVY 1327

Query: 196  NKISRHFEGSYFALNVREAEE--TGGIKDLQKKLLSE-LSKDGNMRNIESQLN----RLA 248
            N+I R FE   F  N+RE  E  + GI  LQ++LLS+ L+    + +I S  +    RL 
Sbjct: 1328 NQIHRKFEDKSFIENIREVYEKYSTGIIHLQQQLLSDILNSKEIIHSIASGTSTIERRLQ 1387

Query: 249  RKKVRIVFDDVTSGSRV-IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
             K+  +V DDVT+   V I+TTRD ++LK    ++ + MKE+   ++ +LF   AF    
Sbjct: 1388 GKRALVVLDDVTTIKHVLIVTTRDVRILKLLEVDRVFTMKEMNERESLELFSWHAFRRPI 1447

Query: 308  LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
                  EL+   + Y                 R+KE WES + KLE IP+ +++E L+IS
Sbjct: 1448 PIKDFSELSRNVVLYE----------------RTKEEWESILSKLERIPNDQVQEKLRIS 1491

Query: 368  YDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRI 413
            YD L D  +K++FLDI CF  G+ R  V  I +               +SL+ ++   +I
Sbjct: 1492 YDGLKDGMEKDIFLDICCFFIGKDRAYVTEILNGCGLHAVIGIAILIERSLVKMEKNNKI 1551

Query: 414  RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
             MHDL+RDMGREIV + S   PGK +RLW H+D + +L KN+GTE +EG+ L   + +R 
Sbjct: 1552 GMHDLIRDMGREIVCESSTKEPGKLSRLWFHQDAHDILTKNSGTETVEGLILRFERTSR- 1610

Query: 474  IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
            +  ++ +F +M  LR L+     +   ++   G    E+R + W +   + +  ++    
Sbjct: 1611 VCFSADSFKEMKNLRLLQL----DNVDLTGDYGYLSKELRWVHWQKSAFRYIPDDLYLGN 1666

Query: 532  LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG- 590
            LV + +  + ++Q+W++ + L ++    K+P                   NLE L +K  
Sbjct: 1667 LVVIDLKHSNIKQVWNETKYLKTTPDFSKSP-------------------NLEKLIMKNC 1707

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
              + ++ +S+G L+ +  + L +  +L+ +P++I  L  L  L +S C ++  L E    
Sbjct: 1708 PCLSKVHQSIGDLNRLHMINLKDCRSLQNLPKNIYQLKSLKTLILSGCSKIDKLEEDIVQ 1767

Query: 650  --NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
              +L  L A++ T ++++P  +    S+ Y++LC +
Sbjct: 1768 MESLTTLIAKD-TGVKEVPYSIVRSKSIGYISLCGY 1802


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 264/781 (33%), Positives = 407/781 (52%), Gaps = 117/781 (14%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIII 61
           DVF+SFRGED R  F SHL        IK F DD  L RG +IS  L+  I+ S  AI++
Sbjct: 19  DVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAIVV 78

Query: 62  FSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM 103
            S  YA+S W                   FY VDPS VR+Q  SFG        +  EK+
Sbjct: 79  VSRNYAASSWCLDELLKIMECNKDTIVPIFYEVDPSDVRRQRGSFGEDVESHSDK--EKV 136

Query: 104 KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEI 163
            +WK AL + A +SG DS   R +SKLI++I  D+  +L +T    +KGL+G+   ++ +
Sbjct: 137 GKWKEALKKLAAISGEDSRNWRDDSKLIKKIVKDISDKLVSTSWDDSKGLIGMSSHMDFL 196

Query: 164 ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDL 223
           +S++ I  + V  L IWG+GG+ K TIA  ++N++S  F+   F  NV+E     G++ L
Sbjct: 197 QSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVCNRYGVRRL 256

Query: 224 QKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT----------------S 261
           Q + L  +   +D    +  S  N    R   K V IV DDV                  
Sbjct: 257 QVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELVKETGWFGP 316

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HLDASHIELTDKAI 320
           GSR+I+TTRD+ +L +   N  Y++K L   +A +LFC +AF  +  L     EL+ +A+
Sbjct: 317 GSRIIVTTRDRHLLLSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSVQAV 376

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YA G+PLAL+VLG +L  RS+  WES + +L+  PH +I EVL++SYD LD+ +K +FL
Sbjct: 377 NYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVLRVSYDGLDEQEKAIFL 436

Query: 381 DIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
            I+CF   +  D V  + D               KSLI ++    +++HDLL  MGRE+V
Sbjct: 437 YISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLI-VESNGCVKIHDLLEQMGRELV 495

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R++++N+P +R  LW  +DI  +L +N+GT+ +EGISL++++++ E+  +  AF  +  L
Sbjct: 496 RQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEIS-EVFASDRAFEGLSNL 554

Query: 488 RFLRFY-----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           + L FY     G+    + + L  +P  ++R+L W   PLKT+      E LV L M  +
Sbjct: 555 KLLNFYDLSFDGETRVHLPNGLSYLP-RKLRYLRWDGYPLKTMPSRFFPEFLVELCMSNS 613

Query: 541 KVEQLWDDVQRLPS-----------------------------SLCTFKTPIT------- 564
            +E+LWD +Q L +                             S C     +T       
Sbjct: 614 NLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQSLVEVTPSIKNLK 673

Query: 565 ----FEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
               F + +C  L+ +P    L++LE + + G ++++  PE    +SW  R +  +++ +
Sbjct: 674 GLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPE----ISWNTRRLYLSSTKI 729

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSMSS 674
           E +P SI  LS L  L +S C+RL+TLP    +L  L + N   C  LE LP  L +++S
Sbjct: 730 EELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTS 789

Query: 675 V 675
           +
Sbjct: 790 L 790



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 139/324 (42%), Gaps = 41/324 (12%)

Query: 558  TFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL 617
            +F TP       C  L R  D    L  L++    + E+P S+G L  +  L LS N N 
Sbjct: 937  SFFTPEGLLHSLCPPLSRFDD----LRALSLSNMNMTEIPNSIGNLWNLLELDLSGN-NF 991

Query: 618  ERIPESIRHLSKLTFLFISHCERLQTLP-ELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
            E IP SI+ L++L  L +++C+RLQ LP ELP  L  +   +CTSL  + +G  +   + 
Sbjct: 992  EFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSI-SGCFNQYCLR 1050

Query: 677  YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
             +   N  KLD  + ++I+    +  +L  E    +  YFPG++IP  F HQ MG S  L
Sbjct: 1051 KLVASNCYKLD--QAAQIL----IHRNLKLESAKPEHSYFPGSDIPTCFNHQVMGPS--L 1102

Query: 737  KTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLY 796
              + P+    + ++ F+ C ++             G+   +       C  K      L 
Sbjct: 1103 NIQLPQSESSSDILGFSACIMIGV----------DGQYPMNNLKIHCSCILKDADACELV 1152

Query: 797  ----SWFLGKIS----YVESDHVFL---GCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLE 845
                 W+    +    Y  SDH+ L    C S   E +     EFS        F P   
Sbjct: 1153 VMDEVWYPDPKAFTNMYFGSDHLLLFSRTCTSM--EAYSEALFEFSVENTEGDSFSPL-- 1208

Query: 846  RGEVKKCGIHFVYAQDSADHILKD 869
             GEVKKC +H +  +D       D
Sbjct: 1209 -GEVKKCAVHLISLKDMMQEFSND 1231



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 40/163 (24%)

Query: 548 DVQRL---PSSLCTFKTPITFEIIDCKMLERLPDELENL--------------------- 583
           D QRL   PS L    +  +  +  C+ LE LPD L+NL                     
Sbjct: 749 DCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVS 808

Query: 584 ---EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
              E L +  T+I E+P  +  LS ++ L +S N  L  +P SI  L  L  L +S C  
Sbjct: 809 TSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSV 868

Query: 641 LQTLPELPCNLGLLSARNC--------TSLEKLPAGLSSMSSV 675
           L++ P     L +    +C        TS+++LP  + ++ ++
Sbjct: 869 LESFP-----LEICQTMSCLRWFDLDRTSIKELPENIGNLVAL 906


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 403/748 (53%), Gaps = 80/748 (10%)

Query: 10  GEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASS 69
           GEDTR+NFT HL   L    I TF DDQL RG+ I   LL TIE S I+I++FS+ YA S
Sbjct: 51  GEDTRNNFTDHLFVNLHRMGINTFRDDQLERGEEIKSELLKTIEESRISIVVFSKDYAQS 110

Query: 70  RW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK-MKRWK 107
           +W                      FY VDPS VRKQ+ SFG  FS   +   EK ++RWK
Sbjct: 111 KWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVDEKKVQRWK 170

Query: 108 NALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVECSIEEIESL 166
           ++LT+A++LSGF  N    ESK I+EI + + KR +++T    N  +VG++  ++E++SL
Sbjct: 171 DSLTKASNLSGFHVND-GYESKHIKEIVSKIFKRSMNSTLLPINDDIVGMDFHLKELKSL 229

Query: 167 LCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQK 225
           L   S  +  + I+G GGI K TIA  V+N+I   F  + F  +VRE   +   ++  Q+
Sbjct: 230 LSSDSHDISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVRETFNKRCQLQLQQQ 289

Query: 226 KLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVTS----------------GSRV 265
            L   +  D   RNI   ++    RL+ KKV IV DDV                  GS +
Sbjct: 290 LLHDTVGDDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVAGSPKWFGPGSTI 349

Query: 266 IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQG 325
           IITTR++ +L    A   Y    L Y +A +LF + AF  +     +++L++  ++YAQG
Sbjct: 350 IITTRNRHLLVEYEATISYEATGLHYREALQLFSRHAFKQNDPKEDYVDLSNCMVQYAQG 409

Query: 326 VPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACF 385
           +PLALKVLG  L G + E WESA+ KL+   + +I +VL+IS D LD SQK VFLDIACF
Sbjct: 410 LPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDVLRISLDGLDYSQKEVFLDIACF 469

Query: 386 LEGEHRDEVISIFDASK--SLINLDLFYR----------IRMHDLLRDMGREIVRKESIN 433
            +GE  D V  I    K    IN+   +           I+MHDL+++MG  IVR+E   
Sbjct: 470 FKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQEMGYAIVREECPR 529

Query: 434 HPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY 493
            P K +RLW   DIY    +  G E I+ ISLD+++ ++EI  ++  F+ M +LR L+ Y
Sbjct: 530 DPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSR-SKEIQFSTEVFATMKQLRLLKIY 588

Query: 494 GDKNKCMVSHLEGVPFA-------EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
            +    +      V          ++R++ W +C L++L  + C E+L+ + +  + +++
Sbjct: 589 CNDRDGLTREEYRVHLPKDFEFPHDLRYIHWQRCTLRSLPSSFCGEQLIEINLKSSNIKR 648

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLG 601
           LW   +RL       +     ++ + K L ++P+   + NLE L ++G T++ EL  S+G
Sbjct: 649 LWKGNKRL-------EKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSLCELHSSIG 701

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS--ARNC 659
            L  +  L L     L+  P +++  S L  L ++ C +L+ +P++  N+G L     N 
Sbjct: 702 DLKQLTYLNLRGCEQLQSFPTNMKFES-LEVLCLNQCRKLKKIPKILGNMGHLKKLCLNG 760

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           + +++LP  +  + S+  ++L N  K +
Sbjct: 761 SGIKELPDSIGYLESLEILDLSNCSKFE 788



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 29/191 (15%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPESLGRLSW 605
            ++ LP S+   ++ +  ++ +C   E+  +   N+++L V   K TTI+ELP S+G L  
Sbjct: 951  IKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQD 1010

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL----GL--LSARNC 659
            ++ L L   SNLER+PE  + +  L  L ++       +  LPC++    GL  L+  NC
Sbjct: 1011 LEILDLDGCSNLERLPEIQKDMGNLRALSLAG----TAIKGLPCSIRYFTGLHHLTLENC 1066

Query: 660  TSLEKLP--AGLSSMSSVLYVNLCNFLKLDPNELSEIVKD-GWMKHSLYEERGIKKSMYF 716
             +L  LP   GL S+  +  +   N         SEI +D   +K  L  E GI      
Sbjct: 1067 RNLRSLPDICGLKSLKGLFIIGCSNL-----EAFSEITEDMEQLKRLLLRETGI------ 1115

Query: 717  PGNEIPKWFRH 727
               E+P    H
Sbjct: 1116 --TELPSSIEH 1124



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 29/187 (15%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK----GTTIRE--LPESLGRLSW 605
            LP S+ +        + +C  L  LPD L  L    +K    G  + E  +P  L  LS 
Sbjct: 1142 LPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCLSS 1201

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            ++ L +S N ++  IP  I  L KL  L ++HC  L+ + ELP +L  + AR C  LE  
Sbjct: 1202 LESLYVSEN-HIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGCPCLET- 1259

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKW 724
                 + SS L+ +L  + K              ++ + +  R        PG+  IP+W
Sbjct: 1260 ----ETFSSPLWSSLLKYFK------------SAIQSTFFGPR----RFVIPGSSGIPEW 1299

Query: 725  FRHQSMG 731
              HQ +G
Sbjct: 1300 VSHQRIG 1306



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 100/267 (37%), Gaps = 87/267 (32%)

Query: 528  CAEKLVSLKMP-CTKVEQL----WD------------DVQRLPSSLCTFKTPITFEIIDC 570
            C E L+ L +  C+K E+     W+             ++ LP+S+   +     ++  C
Sbjct: 960  CLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGC 1019

Query: 571  KMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE----- 622
              LERLP+   ++ NL  L++ GT I+ LP S+   + +  L L N  NL  +P+     
Sbjct: 1020 SNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLPDICGLK 1079

Query: 623  -----------------------------------------SIRHLSKLTFLFISHCERL 641
                                                     SI HL  L  L + +C+ L
Sbjct: 1080 SLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNL 1139

Query: 642  QTLP----ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY---VNLCNFLKLDPNELSEI 694
              LP     L C L +L  RNCT L  LP  L  +   L    +  CN ++       EI
Sbjct: 1140 VALPISIGSLTC-LTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLME------GEI 1192

Query: 695  VKDGWMKHSLYEERGIKKSMYFPGNEI 721
              D W   SL       +S+Y   N I
Sbjct: 1193 PSDLWCLSSL-------ESLYVSENHI 1212



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 13/141 (9%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSW 605
            ++ LP+S+ +  +     +  C   E+  D   N   L+ L ++ + I+ELP S+G L  
Sbjct: 904  IKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLES 963

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
            + +L LSN S  E+  E   ++  L  L++ H     T+ ELP ++G      +L    C
Sbjct: 964  LLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKH----TTIKELPNSIGCLQDLEILDLDGC 1019

Query: 660  TSLEKLPAGLSSMSSVLYVNL 680
            ++LE+LP     M ++  ++L
Sbjct: 1020 SNLERLPEIQKDMGNLRALSL 1040



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPESLGRLSW 605
           ++ LP+S+ +  +     +  C   E+  D   N+  L +   + + I+ELP S+G L +
Sbjct: 810 IKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEF 869

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
           + +L LS  S  E+ PE   ++ +L  L +        + ELP ++G      +LS R C
Sbjct: 870 LLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDE----TAIKELPNSIGSVTSLEILSLRKC 925

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
           +  EK     ++M  +  +NL
Sbjct: 926 SKFEKFSDVFTNMRHLQILNL 946


>gi|105923326|gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 250/709 (35%), Positives = 377/709 (53%), Gaps = 100/709 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ ISQ LL  I+ S I I+
Sbjct: 121 YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISQHLLEAIQESKICIV 180

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  +R
Sbjct: 181 VFSKGYASSRWCLDELVEILKCKYRKTGQIALPIFYDIDPSDVRKQTGSFAEAFVKHEER 240

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             EK+K W+ AL EA +LSG++   +    E+K I+ I  +V  +L     +     VG+
Sbjct: 241 SEEKVKEWREALEEAGNLSGWNLKDMTNGHEAKFIQHIIKEVWNKLSPKDMNVGTHPVGI 300

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  + EI   +  G+E VC + I G+ GI K TIA  VF+K+   FEGS F LNV+E  E
Sbjct: 301 DPLVNEIRDFVSNGTEKVCIVGIHGMPGIGKTTIAKEVFDKLCDEFEGSSFLLNVKEKSE 360

Query: 217 TGGIKDLQKKLLSELSKDGN--MRNIESQL----NRLARKKVRIVFDDVT---------- 260
           +  +  LQK+LL ++ +     + N++        RL  K+V +V DDV           
Sbjct: 361 SKDMVLLQKQLLHDILRQNTEKINNVDRGKVLIKERLPHKRVLVVVDDVARPDQLLDLMG 420

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVIITTRD+ +L    A+++Y+++EL   ++ +LFC+ AF        ++E
Sbjct: 421 EPSWLGPGSRVIITTRDESLLLE--ADQRYQVQELNRDNSLQLFCRHAFRDTKPAKDYVE 478

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  ++Y  G+PLALKVLG  L G+++  WES + +L   P+ EI++ L+IS+D+LD+S
Sbjct: 479 LSNDVVEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKKLRISFDTLDES 538

Query: 375 Q-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLL 419
             KN FLDIACF  G  ++ V  + +                +SLI +D    I MHDLL
Sbjct: 539 TLKNTFLDIACFFIGRKKEYVAKVLEGRYGYNPEDDFGTLIERSLIKVDDSGTIGMHDLL 598

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           R MGREIV++ES  +P +R+R+W  +D + VLK   GTE ++G++LD+ + + +  +++ 
Sbjct: 599 RGMGREIVKEESPENPAQRSRIWSQEDAWIVLKMQMGTEVVKGLTLDVRR-SEDKSLSTG 657

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           +F+KM  L+ L+  G +       L  V    +  + W +CPL+ L  +   + LV + M
Sbjct: 658 SFTKMKLLKLLQINGVELTGSFERLSKV----LTWICWLECPLEFLPSDFTLDYLVVIDM 713

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELP 597
             + + +LW + + L             +I+D    + L           VK   +  L 
Sbjct: 714 RYSNIRELWKEKKILNK----------LKILDLSYSKNL-----------VKTPNMHSLN 752

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
                   +++L+L   S+L  I + I H   L  L IS C +LQ LPE
Sbjct: 753 --------LEKLLLEGCSSLVEIHQCIGHSKSLVSLNISGCSQLQKLPE 793



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
            G LS ++ L LS N N   +P  I  LSKL  L +  C  L ++PELP NL  L A  C
Sbjct: 884 FGGLSSLEELDLSGN-NFFSLPSGIGILSKLRLLTVQECRNLVSIPELPSNLEHLDAFGC 942

Query: 660 TSLE 663
            S++
Sbjct: 943 QSMQ 946


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 299/949 (31%), Positives = 419/949 (44%), Gaps = 208/949 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG+DTR   T HL+  L    I  F DD  L RG+ IS  LL  IE S  A++
Sbjct: 21  YHVFLSFRGQDTRKGVTDHLYASLQRNGITAFRDDMNLERGEVISHELLRAIEESMFAVV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS W                      FY VDP  VR Q  +F   F +  +RF
Sbjct: 81  VLSPNYASSAWCLDELQKIVECKNNLGLQIVPVFYGVDPCDVRHQKGTFEDAFRKQEERF 140

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               EK+KRW+ AL + A  SG+DS   + E+ L+E IA  V  RL     S  + L G+
Sbjct: 141 GGDSEKVKRWREALIQVASYSGWDSKN-QHEATLVESIAQHVHTRLIPKLPSCIENLFGM 199

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              +E++ +L+CIG   V    IWG+GG+ K TIA A++  I   F+ S F  N+R+  E
Sbjct: 200 ASRVEDVTTLMCIGLSDVRFTGIWGMGGVGKTTIARAIYEAIEDQFQISCFLANIRDTCE 259

Query: 217 TGGIKDLQKKLLSELS---------KDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           T GI  LQK L   +           DG MR I    N L  KKV IV DDV        
Sbjct: 260 TNGILQLQKILGEHIHVSRCTFSNLYDG-MRIIR---NSLCNKKVLIVLDDVNDVSQLEN 315

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRV+ITTRD  +LK       Y ++ L   +A + FC  AF  D  +  
Sbjct: 316 LAGNQDWFGPGSRVMITTRDMHLLKTHEVCDTYEVECLDKTEALRFFCSKAFKRDVPEEG 375

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           ++E++ + +KY  G+PLALKVLG YL GR+   W SA++KL  +   +I E L+ISYD L
Sbjct: 376 YLEMSHEVVKYTGGLPLALKVLGSYLYGRNISAWRSAVKKLRSVSDAKILETLRISYDGL 435

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLI----NLDLFYR-- 412
           D  QK +FLDIACF +G+ +D+V+ +F+               +SL+    ++D+F +  
Sbjct: 436 DSMQKEIFLDIACFFKGKPKDKVLDLFEKRGYNPQIDIDVLIERSLVTVKQDIDVFKKKF 495

Query: 413 --IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             + MHDLL++MGR  V +ES N+P KR+RLW  +D+  +L +N GTE I+ I L     
Sbjct: 496 DVLEMHDLLQEMGRNFVIQESPNYPSKRSRLWSPEDLDLMLTQNKGTETIQSIVLPPIG- 554

Query: 471 NREIHMNSY---AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI 527
           N   ++ S+   AF  M +L+FL F       + +H+     + ++ L W  CPL+TL +
Sbjct: 555 NGTYYVESWRDKAFPNMSQLKFLNF-----DFVRAHIHINIPSTLKVLHWELCPLETLPL 609

Query: 528 CAEK--LVSLKMPCTKVEQLW----------------------DDVQRLP---------- 553
             ++  LV +K+  + + QLW                       D+  +P          
Sbjct: 610 VDQRYELVEIKISWSNIVQLWHGFKFLEKLKHLDLSCSGLEQTPDLSGVPVLETLDLSCC 669

Query: 554 -------SSLCTFKTPITFEIIDCKMLERLPDELE------------------------- 581
                   SL   K+ +   + +C  LE  P +LE                         
Sbjct: 670 HCLTLIHPSLICHKSLLVLNLWECTSLETFPGKLEMSSLKELNLCDCKSFMSPPEFGECM 729

Query: 582 -NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
             L  L+ +   I ELP SLG L  +  L L     L  +P+SI  L  L  L  S C  
Sbjct: 730 TKLSRLSFQDMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSS 789

Query: 641 LQTLP----------------------ELPCNLG-------------------------- 652
           L  LP                        PC+ G                          
Sbjct: 790 LCDLPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHELP 849

Query: 653 ---LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERG 709
               LS   C  L+ LP   SS+   L    C+   LD    + + K   +  S  +  G
Sbjct: 850 KLKCLSLNGCKRLQSLPELPSSIRE-LKAWCCD--SLDTRSFNNLSKACSVFASTSQGPG 906

Query: 710 IKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
               M  PG  IP WF H+    S  L    P     ++ +  A C +V
Sbjct: 907 EVLQMVIPGTNIPSWFVHRQ--ESNCLLVPFPHHCHPSERLGIALCFLV 953


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 286/838 (34%), Positives = 416/838 (49%), Gaps = 162/838 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           + VFLSFRG +TR+ FT HL+       +  F DD +L RG  I+  LL +IE S  +++
Sbjct: 12  FHVFLSFRGVETRNKFTDHLYAAFIRTGLTVFKDDTELQRGQLIAPELLNSIEQSLSSVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S  YASSRW                      FY VDP+ VR Q  SF   F +  +RF
Sbjct: 72  ILSPDYASSRWCLDELLTILRSRIDFGRFVFPVFYDVDPTDVRHQRGSFAEAFVKHGERF 131

Query: 100 ---PEKMKRWKNALTEAADLSGFDSN------------------------------VIRP 126
               EK++ W+ AL++ ADLSG+ S                               +I P
Sbjct: 132 GDDSEKVRMWREALSQVADLSGWSSKARVFPSNRSFFIHKDTQLENLGYEDFRYKEMIEP 191

Query: 127 ---------------------ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIES 165
                                E++LIEEI  DV K+L   F   +  LVG++  I  + S
Sbjct: 192 SDLIPLSGLEGSGIITFGFERETELIEEIVADVWKKLQPKFSHYDDELVGIDSRINNMCS 251

Query: 166 LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQ 224
           LL   SE +    IWG+GGI K T+A  ++ KI   F+ S F  NVRE + E  G+  LQ
Sbjct: 252 LLRTDSEEIRFEGIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELSSERDGLLCLQ 311

Query: 225 KKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVTS---------------G 262
           +KLLS L K  +MR IES         N L  KKV +V DD++S               G
Sbjct: 312 RKLLSHL-KISSMR-IESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENLAGKQWFGPG 369

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SRVIITTRDK +L +    + Y  + L   ++ +LF Q AF     +   +EL+ +A++ 
Sbjct: 370 SRVIITTRDKHLLVSLSVCEIYDAQILNSHESLQLFSQKAFRSGKPEEGFVELSKQAVQC 429

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A G+PLALKVLG +LCGR   VWE A++ L+     +I + L+ISYD L D +K +FLDI
Sbjct: 430 AGGIPLALKVLGSFLCGRKASVWEDALKMLQQDLQNDIYKTLRISYDGLRDMEKAIFLDI 489

Query: 383 ACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           ACF +G  +D V  I +               KSLI  D  + + MHDLL++MGR IV  
Sbjct: 490 ACFFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYD-GWHLGMHDLLQEMGRNIVLH 548

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           ES+N  GK++RLW  KDI QVL+ N GTE+ + + L++++   E   N  AF+KM  LR 
Sbjct: 549 ESLNDAGKQSRLWSLKDIDQVLRNNKGTESTQAVVLNLSEA-FEASWNPEAFAKMGNLRL 607

Query: 490 LRFYGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLW 546
           L      NK  + H L+ +P + ++ L W +CPL++L I   +++LV L M  +K++ LW
Sbjct: 608 LMIL---NKLQLQHGLKCLP-SGLKVLVWKECPLESLPIGDQSDELVDLDMCHSKIKHLW 663

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRL 603
              + L +         T  + + K L + PD   + NLE L ++G   + E+  SLG L
Sbjct: 664 KGTKLLGNL-------KTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGLL 716

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP------------------ 645
             +  + L +  NL+ +P  +  ++ L  L ++ C  ++ LP                  
Sbjct: 717 KKISYVTLEDCKNLKSLPGKL-EMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEIP 775

Query: 646 --ELPCNLGLLSA------RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSE 693
             ELP  +G L+       R+C ++  LP   S + S+  +NL  C+     P+ L E
Sbjct: 776 LAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHE 833



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P+ LG LS +  L +S N+ +      I  L KL  L +S C+ LQ+LP LP N+  ++
Sbjct: 923  IPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVN 982

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY 715
              +C+SL+ L                     DP E+   +   +    L +   IK  + 
Sbjct: 983  TSDCSSLKPLS--------------------DPQEIWGHLA-SFAFDKLQDANQIKTLLV 1021

Query: 716  FPGNEIPKWFRHQS 729
             PGNEIP  F +Q+
Sbjct: 1022 GPGNEIPSTFFYQN 1035


>gi|147841678|emb|CAN73064.1| hypothetical protein VITISV_003258 [Vitis vinifera]
          Length = 1567

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 270/785 (34%), Positives = 403/785 (51%), Gaps = 102/785 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEAS--CI- 57
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  L   IE S  C+ 
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLSRAIEESRWCLN 79

Query: 58  AIIIFSERYASSRW-----FFYRVDPSHVRKQSHSFGR----HFSRLRKRFPEKMKRWKN 108
            ++   ER +          FY VDPS VR Q  SFG     H     +   E +++W+ 
Sbjct: 80  ELVKIIERKSQKESVVLLPIFYHVDPSDVRNQRGSFGDALACHERDANQEKKEMIQKWRI 139

Query: 109 ALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLC 168
           AL +AA+L G   +  + E+++++EI N +++RL+    S  K +VG+   +E+++SL+ 
Sbjct: 140 ALRKAANLCGCHVDD-QYETEVVKEIVNTIIRRLNHQPLSVGKNIVGISVHLEKLKSLMN 198

Query: 169 IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLL 228
                V  + I G GG+ K TIA A++N+IS  ++GS F  N+RE  + G I  LQ++LL
Sbjct: 199 TELNKVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLKNMRERSK-GDILQLQQELL 257

Query: 229 SEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDV----------------TSGSRVI 266
             +   K   + N++  ++ + R     +V I+F DV                 + S +I
Sbjct: 258 HGILRGKFFKINNVDEGISMIKRCLSSNRVLIIFYDVDELKQLEYLAEEKDWFQAKSTII 317

Query: 267 ITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGV 326
           IT+RDK VL     +  Y + +L   +A +LF  WAF  +H    +  L+   I YA G+
Sbjct: 318 ITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKKVYKNLSYNIIDYANGL 377

Query: 327 PLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFL 386
           PLALKVLG  L G+    WESA+ KL+IIPH+EI  VL+IS+D LDD  K +FLD+ACF 
Sbjct: 378 PLALKVLGASLFGKKISEWESALCKLKIIPHMEIHNVLRISFDGLDDIDKGIFLDVACFF 437

Query: 387 EGEHRDEVISIFD--ASKSLINLDLFYRIR-------MHDLLRDMGREIVRKESINHPGK 437
           +G+ +D V  I    A   +  LD    I        MHDL++ MG EI+R+E    PG+
Sbjct: 438 KGDDKDFVSRILGAHAKHGITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPKDPGR 497

Query: 438 RNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN 497
           R+RLW   + Y VL +NTGT AIEG+ LD  K N   H+ + +F +M KLR L+ +  + 
Sbjct: 498 RSRLW-DSNAYHVLMRNTGTRAIEGLFLDRCKFNPS-HLTTESFKEMNKLRLLKIHNPRR 555

Query: 498 KCMV-SHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD---- 547
           K  + +HL     F+  E+R+L W   PLK+L  N  A+ LV L +  + ++Q+W     
Sbjct: 556 KLFLENHLPRDFEFSSYELRYLHWDGYPLKSLPMNFHAKNLVELSLRDSNIKQVWKGNKL 615

Query: 548 ------------------------------------DVQRLPSSLCTFKTPITFEIIDCK 571
                                                ++ LP  +  +K   T     C 
Sbjct: 616 HDKLRVIDLSHSVHLIRIPGFSSVPNLEILTLEGCVSLELLPRGIYKWKHLQTLSCNGCS 675

Query: 572 MLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
            LER P+    +  L  L + GT I +LP S+  L+ ++ L+L   S L +IP  I HLS
Sbjct: 676 KLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSYICHLS 735

Query: 629 KLTFLFISHCERLQ-TLPELPCNLGLLSARNCTS--LEKLPAGLSSMSSVLYVNL--CNF 683
            L  L + HC  ++  +P   C L  L   N        +P  ++ +S +  +NL  CN 
Sbjct: 736 SLKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNN 795

Query: 684 LKLDP 688
           L+  P
Sbjct: 796 LEQIP 800



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 141/340 (41%), Gaps = 70/340 (20%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVK--GTTIRELPESLGRLSWV 606
            LP S+C   +  T  +  C   ++LPD L   ++L +L+V    +   +LP SL  L  +
Sbjct: 1182 LPESICNLTSFKTLVVESCPNFKKLPDNLGRLQSLLHLSVGPLDSMNFQLP-SLSGLCSL 1240

Query: 607  KRLIL--------SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
            + L L        S  ++  RIP+ I  L  L  L + HC+ LQ +PELP  L  L A +
Sbjct: 1241 RALNLQGCNLKGISQGNHFSRIPDGISQLYNLEDLDLGHCKMLQHIPELPSGLWCLDAHH 1300

Query: 659  CTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG 718
            CTSLE     LSS S++L+ +L    K      S+I +  +++    E RG  K+ +   
Sbjct: 1301 CTSLE----NLSSQSNLLWSSLFKCFK------SQIQRVIFVQQR--EFRGRVKT-FIAE 1347

Query: 719  NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-----------------FP 761
              IP+W  HQ  G   T+K  P      +  + F  C + V                 F 
Sbjct: 1348 FGIPEWISHQKSGFKITMKL-PWSWYENDDFLGFVLCFLYVPLEIETKTPWCFNCKLNFD 1406

Query: 762  AFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGE 821
                YF ++S +          C D    S+G L  +   +I      + +   N+    
Sbjct: 1407 DDSAYFSYQSDQ------FCEFCYDEDASSQGCLMYYPKSRIPKSYHSNEWRTLNASFNV 1460

Query: 822  YFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            YFG                   ++  +V +CG HF+YA D
Sbjct: 1461 YFG-------------------VKPVKVARCGFHFLYAHD 1481


>gi|357462143|ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355490401|gb|AES71604.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1133

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 262/712 (36%), Positives = 392/712 (55%), Gaps = 80/712 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRGEDTR NFTSHL+  LS K I TFIDD +L +GD IS +L+  IE S  +I+
Sbjct: 83  FDVFISFRGEDTRRNFTSHLYEALSKKVI-TFIDDNELEKGDEISSALIKAIEKSSASIV 141

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR--- 96
           IFS+ YASS+W                      FY +DPSHVR Q  S+   F +     
Sbjct: 142 IFSKDYASSKWCLNELVKILECKKDNGQIVIPVFYEIDPSHVRNQKGSYMLAFEKHEQDL 201

Query: 97  KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVG 155
           K+  +K+++WK+ALTEAA+L+G+ S   + +S  I+ I  DVLK+L+     +  G L G
Sbjct: 202 KQSKDKLQKWKDALTEAANLAGWYSQNYKNDSIFIKYIIEDVLKKLNLRHPFEVNGHLFG 261

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E   EE++SLL IGS  V  L +WG+GGI K T+A  +++K+   F+      NV E  
Sbjct: 262 IEEKYEEVKSLLKIGSNDVRGLGLWGMGGIGKTTLAKHLYSKLCSQFDHHCLLENVSEES 321

Query: 216 ETGGIKDLQKKLLS---ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------- 261
              G+K ++ +L S   EL  D         + RL  KK  IV DDV +           
Sbjct: 322 TRCGLKGVRNQLFSKLLELRPDAPNLETTISMRRLVCKKSLIVLDDVATLEQAENLNIVN 381

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSRVI+TTRDKQV         Y +K L   ++ ++FC  AF   +    + +L+
Sbjct: 382 NCLGPGSRVIVTTRDKQVCSQFNKCAIYEVKRLNKDESLEVFCLEAFREKYPKIGYGDLS 441

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            +AI Y  G PL LKVLG     +SKEVWES + KL+ IP+  I +VLK+S+D LD +Q+
Sbjct: 442 KRAIGYCGGNPLGLKVLGTNFRTKSKEVWESELEKLKKIPNRRIHDVLKLSFDGLDCTQQ 501

Query: 377 NVFLDIAC-FLEGEH--RDEVISIFDAS-------------KSLINLDLFYRIRMHDLLR 420
           ++FLDI C F  G++  RD + ++ DAS             K+LI   +   I MHDLL 
Sbjct: 502 DIFLDIVCFFFLGKYIDRDFLTTLSDASNFFAESGIEVLSNKALIVFRICNLIDMHDLLV 561

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGREIV+++S  +PG R+RLW   ++   LK   GTE +E I  D++++ R++++ S +
Sbjct: 562 EMGREIVKQQSPKNPGSRSRLWDPMEVCDTLKYKKGTEVVEVIIFDISEI-RDLYLTSDS 620

Query: 481 FSKMPKLRFLRFYG-----DKNKCMVSH-LEGVPFA--EVRHLEWPQCPLKTL--NICAE 530
           F  M  LR L  +      D+ K    H L+G+ +   ++RHL W   PL++L     AE
Sbjct: 621 FKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESLPSTFSAE 680

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENLEYLTVK 589
            LV L+M  +K+++LWD +Q+L  +L +     + ++I+   L R P   L +L++    
Sbjct: 681 WLVRLEMRGSKLKKLWDGIQKL-GNLKSIDLCYSKDLIEMPDLSRAPKLSLVSLDFC--- 736

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
             ++ +L  S+     ++ L+L    N+E +  +I   S L  L ++ C  L
Sbjct: 737 -ESLSKLHPSILTAPKLEALLLRGCKNIESLKTNISSKS-LRRLDLTDCSSL 786



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 140/335 (41%), Gaps = 48/335 (14%)

Query: 485  PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAEKLVSLKMPCTKVE 543
            PKL  L   G KN  + S    +    +R L+   C  L   ++ +EK+  L +  T   
Sbjct: 750  PKLEALLLRGCKN--IESLKTNISSKSLRRLDLTDCSSLVEFSMMSEKMEELSLIQTFKL 807

Query: 544  QLWDDVQRLPSSLCTFKTPITFEIIDCKMLE----RLPDELENLEYLTVKGTTIRELPES 599
            + W  +    S       P    +  CK L     +L ++L +LE +         L   
Sbjct: 808  ECWSFMFCKSSGQIR---PSCLSLSRCKKLNIIGSKLSNDLMDLELVGCPQINTSNLSLI 864

Query: 600  LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
            L  L  ++ L LS+ SNLE +PE+I++ SKL  L +  C +L++LP+LP +L  L A NC
Sbjct: 865  LDELRCLRELNLSSCSNLEALPENIQNNSKLAVLNLDECRKLKSLPKLPASLTELRAINC 924

Query: 660  TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
            T L+     + S+   +  N+ + L    NE   I+   +               + PG+
Sbjct: 925  TDLD-----IDSIQRPMLENILHKLHTIDNEGDRILDTNF------------GFTFLPGD 967

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGN 779
             +P  F   +  SS  +   P       KL +  FC +++   +  Y+            
Sbjct: 968  HVPDKFGFLTRESSIVIPLDPK-----CKLSALIFC-IILSGRYGDYYE----------- 1010

Query: 780  VYAVCCDWKRKSEGHLYSW-FLGKISYVESDHVFL 813
              +VCCD  +  +  +++W  +     +  DHV L
Sbjct: 1011 --SVCCDCFQNGK-IIFNWDQVVSAEMLTEDHVLL 1042


>gi|105923139|gb|ABF81459.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1421

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 263/761 (34%), Positives = 403/761 (52%), Gaps = 90/761 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS  LL  ++ S I+I+
Sbjct: 204 YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAVQESKISIV 263

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  +R
Sbjct: 264 VFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSDVRKQNGSFAEAFVKHEER 323

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
             EK+ K W+ AL EA +LSG + N +    E+K I+EI  DVL +LD  +    + LVG
Sbjct: 324 SEEKLVKEWRKALEEAGNLSGRNLNDMANGHEAKFIKEIIKDVLNKLDPKYLYVPEHLVG 383

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++     I   L   ++ V  + I G+ GI K TIA  VFN++   FEGS F  N+ E  
Sbjct: 384 MDRLAHNIFDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETP 443

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQ------LN-RLARKKVRIVFDDVT------- 260
           ++  G+  LQ +LL ++ K  ++ N E        +N R+ RK+V  V DDV        
Sbjct: 444 KKLTGLVRLQTQLLRDILKQ-DVANFECVDRGKVLINERIRRKRVLFVADDVARQDQLNA 502

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRD  +L+   A++ Y+++EL    + +LF   AF        
Sbjct: 503 LMGERSWFGPGSRVIITTRDSNLLRK--ADQTYQIEELTRDQSLQLFSWHAFKHSKPAED 560

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +IEL+   + Y  G+PLAL+V+G  L G+++  W+S + KL  IP+ +I+  L+ISYDSL
Sbjct: 561 YIELSKDVVDYCGGLPLALEVMGACLYGKNRGGWKSVIDKLRRIPNHDIQGKLRISYDSL 620

Query: 372 DDSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMH 416
           D  + +N FLDIACF     +  V  +  A               +SLI ++   +I MH
Sbjct: 621 DGEELRNAFLDIACFFIDRKKRYVAKVLGARCGYNPEVDLETLRGRSLIKVNAIGKITMH 680

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DLLRDMGRE+VR+ S   PGKR R+W+ +D + VL++  GT+ +EG++LD+ + +    +
Sbjct: 681 DLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDV-RASEAKSL 739

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLK--TLNICAEK 531
           ++ +F+KM +L  L+  G       +HL G   +   E+  + W QCPLK  + +   + 
Sbjct: 740 STRSFAKMKRLNLLQING-------AHLTGSFKLLSKELMWICWLQCPLKYFSSDFTLDN 792

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG- 590
           L  L M  + +++LW   Q++ + L       +  +I    L        +LE L +KG 
Sbjct: 793 LAVLDMQYSNLKELWKG-QKILNRLKILNLNHSKNLIKTPNLHS-----SSLEKLKLKGC 846

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           +++ E+ +S+  L+ +  L L    NL+ +PESI ++  L  L IS C +L+ LPE   +
Sbjct: 847 SSLVEVHQSIENLTSLVFLNLEGCWNLKILPESIGNVKSLETLNISGCSQLEKLPECMGD 906

Query: 651 LGLLSARNCTSL--EKLPAGLSSMSSVLYVNLCNFLKLDPN 689
           +  L+      +  E+    +  +  V  ++LC +    P+
Sbjct: 907 MESLTELLADGIENEQFLTSIGQLKHVRRLSLCGYSSAPPS 947


>gi|356561225|ref|XP_003548883.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1052

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 270/765 (35%), Positives = 401/765 (52%), Gaps = 90/765 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDDQ L +GD I+++L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRYGFTGNLYNVLRERGIHTFIDDQELQKGDQITKALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+VDPS VRK   SFG     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKNDVLVLPVFYKVDPSDVRKHRGSFGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L     EK++ WK AL + +++SG  F  +  + E K I+EI   V  + +      +  
Sbjct: 128 LNSNNMEKLETWKMALHQVSNISGHHFQHDGDKYEYKFIKEIVELVSSKFNRDLLYVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG+E  +  ++SLL +GS+ V  +  I G+GG+ K T+A AV+N I+RHFE SYF  NV
Sbjct: 188 LVGLESPVLAVKSLLDVGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIARHFEASYFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS---- 261
           RE     G++ LQ  LLS++ +D  ++            ++L +KKV ++ DDV      
Sbjct: 248 RETSNKKGLQHLQSILLSKIVRDKKIKLTNWREGTHIIKHKLKQKKVLLILDDVNEHIQL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HL 308
                       GSRVIITTRD+ +L      K Y ++EL    A +L  Q AF  +  +
Sbjct: 308 QAIIGSPDWFGRGSRVIITTRDEHLLALHNVKKTYMLRELNKKYALQLLIQKAFELEKEV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++A+ YA G+PLAL+V+G  L G+S E WESA+   E IP   I  +LK+SY
Sbjct: 368 DPSYHDILNRAVTYASGLPLALEVIGSNLFGKSIEEWESALNGYERIPDKSIYMILKVSY 427

Query: 369 DSLDDSQKNVFLDIACFLE----GEHRDEVISIFD----------ASKSLINLDLFY--- 411
           D+L++ +KN+FLDIAC  +    GE +D + + +             KSLIN+       
Sbjct: 428 DALNEDEKNIFLDIACCFKEYKLGELQDILYAHYGRCMKYHIGVLVKKSLINIHECSWDS 487

Query: 412 -RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             +R+HDL+ DMG+EIVR+ES   PGKR+RLW H+DI  VL++N GT  IE I ++ +  
Sbjct: 488 KVMRLHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINLVLQENKGTSKIEIICMNFSSF 547

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
             E+  +  AF KM  L+ L    D   C       +P   +R LEW +CP +    N  
Sbjct: 548 GEEVEWDGNAFKKMKNLKTLIIQSD---CFSKGPRHLP-NTLRVLEWWRCPSQEWPRNFN 603

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
            ++L   K+P +    L   +  L +      T +T +  +C  L  +PD   L NLE L
Sbjct: 604 PKQLAICKLPHSSFTSL--GLAPLFNKRLVNLTRLTLD--ECDSLTEIPDVSGLSNLENL 659

Query: 587 TVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           +      +  +  S+G L  +K L       L+  P     L+ L    +S+C  L++ P
Sbjct: 660 SFASCWNLFTIHHSVGLLEKLKTLNAEGCPELKSFPP--LKLTSLEMFQLSYCSSLESFP 717

Query: 646 ELPC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           E+     N+  LS  +C ++ KLP    +++ +  + + N  + D
Sbjct: 718 EILGKMENITQLSWTDC-AITKLPPSFRNLTRLQLLVVENLTEFD 761


>gi|255547494|ref|XP_002514804.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223545855|gb|EEF47358.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1082

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 293/814 (35%), Positives = 427/814 (52%), Gaps = 132/814 (16%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI--RGDNISQSLLGTIEASCIAII 60
           DVFLSF+GEDT  NFTSHL+  L  K + TF DDQ +  RG    Q +   I+ S I+I+
Sbjct: 11  DVFLSFQGEDTGKNFTSHLYAALCQKGVITFKDDQELESRGTLSDQEIFKAIQDSSISIV 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS   ASS                        FY VDP+ VRKQ+  FG  F++  K F
Sbjct: 71  IFSRNSASSTRCLDELVEIFECMKTKGQNVLPVFYSVDPAEVRKQTGRFGESFAKYEKLF 130

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT---FQSKNKGL 153
                K+++W+ A T  A+LSG+D+   R ES+LIEEI  +VLK+L  +   F S +K  
Sbjct: 131 KNNIGKVQQWRAAATGMANLSGWDTQN-RHESELIEEIVEEVLKKLRKSSHRFSSASKNF 189

Query: 154 VGVECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+   L    S+ V  + I G+GGI K TIA AV+ ++S  FEGS F  NVR
Sbjct: 190 VGMNSRLNEMMKYLGKRESDDVRFVGICGMGGIGKTTIARAVYAELSSEFEGSCFLANVR 249

Query: 213 EAEETGGIKDLQKKLLSE--LSKDGNMRNIESQLN----RLARKKVRIVFDDVT------ 260
           E EE   +  LQ++LLSE  + +   + +I +  N    RL+ KKV I+ DDV       
Sbjct: 250 EVEEKNSLS-LQEQLLSETLMERKITVWDIHAGRNEIKNRLSHKKVLIILDDVNHLEQLK 308

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSR+IITTRD+ +L      + YR+  L + +A +LF   AF  D+   
Sbjct: 309 SLAGMSDWFGNGSRIIITTRDEHLLLCHGVERIYRVGGLNHDEALRLFSLKAFKNDYPAD 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            ++EL++  + YA G+PLAL VLG  L GRS   W+SA+ +L+ IP+  I + L IS++ 
Sbjct: 369 DYVELSNHFVNYANGLPLALDVLGSCLYGRSINEWQSALDRLKEIPNKRILDKLYISFEG 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           L + +K VFLDIACF +GE +  V+ + ++             SKSLI +    RI MHD
Sbjct: 429 LQEIEKKVFLDIACFFKGEDKHYVVKVLESCGFYAEIGIRVLLSKSLITIT-NDRIWMHD 487

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL++MGR+IVR+     PG+R+RLW +KD+  VL  +TGTE +EGI LD  +   + H++
Sbjct: 488 LLQEMGRDIVRRSCYEEPGRRSRLWLYKDVSHVLSNDTGTEQVEGIVLDSCE-QEDKHLS 546

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           + AF KM KLR L+    +N  +   LE +   ++R+LEW + P ++L      +KLV L
Sbjct: 547 AKAFMKMRKLRLLKL---RNVRLSGSLEYLS-NKLRYLEWEEYPFRSLPSTFQPDKLVEL 602

Query: 536 KMPCTKVEQLWDDVQ--------RLPSSLCTFKTPITFE--IIDCKMLER---------- 575
            +P + ++QLW  ++         L  S+   KT + F   + D K LE+          
Sbjct: 603 HLPSSNIQQLWKGMKPLKMLKVIDLSYSVNLIKT-MDFRDGLWDMKCLEKLDIGGIAGKQ 661

Query: 576 ---------------LPDELENL-EYL-------TVKGTTIR-------ELPESLGRLSW 605
                          LP +  NL ++L       T++   +         LP  L     
Sbjct: 662 LASTKAWDFLLPSWLLPRKTLNLMDFLPSISVLCTLRSLNLSYCNLAEGTLPNDLSCFPS 721

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC----TS 661
           ++ L LS N +   +P SI  LSKL  L  +HC++LQ+LP LP  +  LS   C    TS
Sbjct: 722 LQSLNLSGN-DFVSVPTSISKLSKLEDLRFAHCKKLQSLPNLPSGILYLSTDGCSSLGTS 780

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
           L K+      + ++ + N C  L+  P+  S IV
Sbjct: 781 LPKIITKHCQLENLCFAN-CERLQSLPDLSSSIV 813


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 270/755 (35%), Positives = 398/755 (52%), Gaps = 121/755 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR NFT HL+  L  + I TF DD+ L +G +I+  L   IE S I II
Sbjct: 19  YDVFLSFRGDDTRKNFTDHLYTSLVTRGIHTFRDDEELEKGGDIAADLSRAIEESRIFII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA SRW                      FY V PS VR QS SF   F+   K  
Sbjct: 79  IFSKNYAYSRWCLNELLKIIDCVTQKESMVVPIFYHVPPSDVRNQSGSFDYAFTFHEKDA 138

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +K K    +W+ ALT+AA++SG+     + ES++I +I   +L++L  T     K +VG
Sbjct: 139 DQKKKEMVEKWRTALTKAANISGWHVEN-QYESEVIGQIIEKILQKLGPTHLYVGKNIVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++  +E++++L+ I    VC + I+GIGGI K TIA A++N+IS  FEGS F  +VRE +
Sbjct: 198 MDYHLEQLKALINIELNDVCIIGIYGIGGIGKTTIAKAIYNEISCKFEGSSFLADVREQS 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQL--------NRLARKKVRIVFDDVT------ 260
           ++  G+  LQ +LL + +  G  +   S +        ++L  K+V ++ DDV       
Sbjct: 258 KDNAGLLRLQNQLLDD-TLAGTYKKKSSSIYGATHEIRDKLRLKRVLVILDDVDGRRQLD 316

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     SGSR+IITTR K ++    ANK Y  ++L   +A KLF  +AF  +    
Sbjct: 317 YLAGECEWFGSGSRIIITTRHKDLVAIDGANKSYEPRKLNDEEAIKLFSLYAFKQNVPRE 376

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
           ++  L + A+KYAQG+PLAL VLG  L   R    WES +RKLE  P+ EI  VL+ S+D
Sbjct: 377 NYKNLCENAVKYAQGLPLALAVLGSTLSSKRGIREWESELRKLEKEPNREIYNVLRTSFD 436

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDAS---------KSLINLDLFYRIRMHDLLR 420
            L   +  +FLDIACF +G+ RD V  I D +         + LI + L  +I MHDL++
Sbjct: 437 GLSRVEGEIFLDIACFFKGKDRDFVSRILDDAEGEISNLCERCLITI-LDNKIYMHDLIQ 495

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG E+VR++  N PG+++RLW   D+  VL +N GT+AIEG+ +DM+   +EI   +  
Sbjct: 496 QMGWEVVREKCQNEPGEQSRLWDLDDVSSVLTRNAGTKAIEGLFMDMS-AQQEIQFTTET 554

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEG--------------VPFAEVRHLEWPQCPLKTL- 525
           F+KM KLR L+ + D     +  ++G              +P  E+R+L W    LK L 
Sbjct: 555 FTKMNKLRLLKIHQDAKYDHIKEIDGDVHFPQVALPEDLKLPSFELRYLHWDGYSLKYLP 614

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----E 579
            N   + LV L + C+ ++QLW+  + L             ++I+    +RL +      
Sbjct: 615 PNFHPKNLVELNLRCSNIKQLWEGNKVLKK----------LKVINLNHSQRLMEFPSFSM 664

Query: 580 LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE---------------- 622
           + NLE LT++G  +++ LP  + RL  ++ L   + S LE  PE                
Sbjct: 665 MPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGT 724

Query: 623 --------SIRHLSKLTFLFISHCERLQTLPELPC 649
                   SI HL  L +L ++HC+ L  LPE  C
Sbjct: 725 AIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENIC 759



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 3/138 (2%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LPS +   K+  TF    C  L+  P+  E+++ L    + GT+++ELP S+  L  
Sbjct: 1102 LESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQG 1161

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +K L L N  NL  IP++I +L  L  L +S C +L  LP+   +L  L       L+ +
Sbjct: 1162 LKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSM 1221

Query: 666  PAGLSSMSSVLYVNLCNF 683
               L S S + ++ + N 
Sbjct: 1222 SCQLPSFSDLRFLKILNL 1239



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 28/285 (9%)

Query: 484 MPKLRFLRFYGDKNKCM----VSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPC 539
           M  L+ L  YG   + +    + HLEG+ +  + H +     +   NIC   L  L +  
Sbjct: 713 MKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCK--NLVILPENICLSSLRVLHLNG 770

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRE- 595
           + +        R+  S           + DC+++E   D    L +L+ L +    + + 
Sbjct: 771 SCI------TPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKE 824

Query: 596 -LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            +P+ + RLS ++ L LS  +N+ ++P SI HLSKL FL++ HC++LQ   +LP ++  L
Sbjct: 825 GIPDDIYRLSSLQALDLSG-TNIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFL 883

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
              +  S + L     S    L+  L N  K +  ++    + GW      +     K +
Sbjct: 884 DGHD--SFKSL-----SWQRWLWGFLFNCFKSEIQDVE--CRGGWHDIQFGQSGFFGKGI 934

Query: 715 YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
                 +P W  +Q++G+   ++  P      N  + FA CAV V
Sbjct: 935 SIVIPRMPHWISYQNVGNEIKIEL-PMDWYEDNDFLGFALCAVYV 978



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 8/114 (7%)

Query: 569  DCKMLERLPDELENLEYLTVKGTT----IRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            +CK LE LP ++  L+ LT    +    ++  PE    +  ++ L L   S L+ +P SI
Sbjct: 1098 NCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTS-LKELPSSI 1156

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSLEKLPAGLSSMSSV 675
            +HL  L +L + +C+ L  +P+  CNL  L       C+ L KLP  L S++ +
Sbjct: 1157 QHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQL 1210



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P  +  LS ++ L L  N +   IP  I  LSKL  L +SHCE LQ +PELP +L +L 
Sbjct: 1274 IPSEICYLSSLQALYLKGN-HFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLD 1332

Query: 656  ARNC 659
            A  C
Sbjct: 1333 AHGC 1336



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 581  ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
            E+ E L +  T I EL  ++  LS ++ L L N   LE +P  I  L  LT    S C +
Sbjct: 1067 EHEEKLCLGETAINELL-NIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSK 1125

Query: 641  LQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCN 682
            LQ+ PE+  ++ +L     + TSL++LP+ +  +  + Y++L N
Sbjct: 1126 LQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLEN 1169


>gi|357469145|ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncatula]
 gi|355505912|gb|AES87054.1| NBS-LRR resistance protein [Medicago truncatula]
          Length = 1684

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 261/773 (33%), Positives = 396/773 (51%), Gaps = 85/773 (10%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
            MYDVFLSFRGED R  F SHL+  L    I  F DD  I RGD+IS SLL  IE S   I
Sbjct: 513  MYDVFLSFRGEDNRAKFMSHLYSSLQNAGIYVFRDDDEIQRGDHISISLLRAIEQSRTCI 572

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL--R 96
            ++ S  YA+SRW                      FY V PS VR Q   FG+ F  L  +
Sbjct: 573  VVLSTNYANSRWCMLELEKIMEIGRNRGLVVVPVFYEVAPSEVRHQEGQFGKSFDDLISK 632

Query: 97   KRFPEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                E  K  WK  L +   ++GF     R ES  I+ I   + + LD T     +  VG
Sbjct: 633  NSVDESTKSNWKRELFDIGGIAGFVLIDSRNESADIKNIVEHITRLLDRTELFVAEHPVG 692

Query: 156  VECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            VE  +E +  LL I  S+ V  L IWG+GG+ K T+A A++N+I   FEG  F LN+RE 
Sbjct: 693  VESRVEAVTKLLNIQNSDDVLILGIWGMGGMGKTTLAKAIYNQIGSKFEGRSFLLNIREL 752

Query: 215  EETGGIK-DLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS------ 261
             ET   +  LQ+K+L ++ K     +R++ES  N    +L++ +V +VFDDV        
Sbjct: 753  WETDTNQVSLQQKILDDVYKTLTFKIRDLESGKNMLKEKLSQNRVLLVFDDVNELEQLKA 812

Query: 262  ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR+IITTRD  +L+ C   + Y ++E+   ++ KLF   AF        
Sbjct: 813  LCGSRDWFGPGSRIIITTRDMHLLRLCGVYQMYTIEEMDKIESLKLFSWHAFKQPSPKED 872

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
                +   I Y+ G+PLAL+VLG YL       W+  + KL+ IPH +++E LK+S+  L
Sbjct: 873  FATHSTDVIAYSGGLPLALEVLGSYLADCEITEWQYVLEKLKCIPHDQVQEKLKVSFHGL 932

Query: 372  DD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
             D ++K +FLDIACF  G  + +VI I +               ++L+ +D   ++RMHD
Sbjct: 933  KDFTEKQIFLDIACFFIGMDKKDVIQILNGCGFFADIGIKVLVERALVTVDNRNKLRMHD 992

Query: 418  LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
            LLRDMGR+I+ +E+ + P KR+RLW H +++ +L+K  GTEA++G++L+     R+  + 
Sbjct: 993  LLRDMGRQIIYEEAPSDPEKRSRLWRHGEVFDILEKRKGTEAVKGLALEF---PRKDCLE 1049

Query: 478  SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC--PLKTLNICAEKLVSL 535
            + AF KM KLR LR  G K K    +L G    +++ L W     P          LVS+
Sbjct: 1050 TKAFKKMNKLRLLRLAGVKLKGDFKYLSG----DLKWLYWHGFAEPCFPAEFQQGSLVSV 1105

Query: 536  KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIR 594
            ++  ++++QLW+  Q L  +L       + ++ +      LP    NLE L +K   ++ 
Sbjct: 1106 ELKYSRLKQLWNKCQML-ENLKILNLSHSLDLTETPDFSYLP----NLEKLVLKNCPSLS 1160

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCN 650
             +  S+G L  +  + L   + L ++P SI  L  L  L +S C  ++ L E    +   
Sbjct: 1161 TVSHSIGSLHKLILINLRGCTGLRKLPRSIYKLKSLETLILSGCSMIEKLEEDLEQMESL 1220

Query: 651  LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
            + L++ +  T++ K+P  +  M S+ Y++ C F     +    +++  WM  S
Sbjct: 1221 ITLIADK--TAITKVPFSIVRMKSIGYISFCGFEGFSRDVFPSLIR-SWMSPS 1270



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 236/494 (47%), Gaps = 74/494 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKS-IKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSF   D +  F S L   LSL++ I  F D   I+     +S+L  I+   +A++
Sbjct: 27  YNVFLSFCAHD-KGYFLSSLEEALSLEAGINVFGD---IKRFQHVESVLNVIQDCKVAVV 82

Query: 61  IFSERYASSR----------------------WFFYRVDPSHVRKQ--SHSFGRHFSRLR 96
           +FS+ Y +S                        F+  V P +        +F     R+ 
Sbjct: 83  LFSKNYTNSSSCIQELEKITQCCRTSDLVVLPVFYQGVGPFYHGDMFGGDTFHDFLDRIS 142

Query: 97  ----KRFPEKMKRWKNALTEAADLSGFDSNVIRP----ESKLIEEIANDVLKRLDATFQS 148
                +  +K+  W  A+T+A    G    + +P    E   I +   D+++ +     +
Sbjct: 143 MEEISKEEDKLMTWVAAITKANKYLGSRDLIPKPIYRYEHVSITDYIKDIVEHITCVI-N 201

Query: 149 KNKGLVGVECS------IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF 202
           KN+      C+      ++++  LL   S+    + IWG+ GI K TIA A++++I  +F
Sbjct: 202 KNRDFCANSCTPSVKSGVQDVIQLLK-QSKSPLIIGIWGMTGIGKSTIAQAIYDQIGLYF 260

Query: 203 EGSYFALNVREA-EETGGIKDLQK-----KLLSELSKDGNMRNIESQLNRLARKKVRIVF 256
           E   F  ++    EE    + L K     ++L  L    N+  +E QL+ L  ++ R  F
Sbjct: 261 EHKSFLKDLGVLWEEQNHDQVLFKGHQHHRVLLVLD---NIDKLE-QLDVLGLRRSRKWF 316

Query: 257 DDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI-EL 315
            +   GS++IITTRD+ +LK    +  YR+KEL  +++ K+F   AF           EL
Sbjct: 317 GE---GSKIIITTRDRHLLKKHGIDHIYRVKELDESESLKVFNLAAFSQATTPQEDFSEL 373

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE--IIPHVEIEEVLKISYDSLDD 373
           + + + Y++G+PLALK LG +L G     W++ ++ L+   IP   ++E L+ S+  L D
Sbjct: 374 SRQLVAYSRGLPLALKELGFFLNGEEALKWKNVLKSLKRLSIPAPRLQEALEKSFSDLSD 433

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLR 420
            +K +FLDIAC   G + ++V  I + S             KS + +D   ++ +H LL+
Sbjct: 434 EEKRIFLDIACLFVGMNLNDVKQILNRSTQSAALEISNLEDKSFLTIDENNKLGIHVLLQ 493

Query: 421 DMGREIVRKESINH 434
            M R+I++++S N+
Sbjct: 494 AMARDIIKRKSSNN 507


>gi|357515237|ref|XP_003627907.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|357515241|ref|XP_003627909.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521929|gb|AET02383.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521931|gb|AET02385.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1110

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 263/747 (35%), Positives = 386/747 (51%), Gaps = 102/747 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF+SFRGEDTR  FT  L+  LS K   TFID     G   +++L+  IE S I I+
Sbjct: 10  VYDVFISFRGEDTRLGFTGFLYKTLSEKGFHTFIDHHADAGRGTTKTLVDAIEESRIGIV 69

Query: 61  IFSERYASSRW------------------------FFYRVDPSHVRKQSHSFGRHFSRLR 96
           +FSE YASS W                         FY VDPSHVR QS  +G+     +
Sbjct: 70  VFSENYASSTWCLDELAYIIDSFSNKKNFRRSVFPVFYNVDPSHVRHQSGIYGQALDSHQ 129

Query: 97  KRF---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDAT-FQSKNK 151
           K      EK+ +WKNAL +AA+LSGF   +    E +LI++I + V  ++D+T +     
Sbjct: 130 KNNNFNSEKLNKWKNALKQAANLSGFHFKHGDGYEYELIDKIVDLVSTKIDSTPYLRVVD 189

Query: 152 GLVGVECSIEEIESLL---------CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF 202
             +G+   + E+  LL          +GS G+  L I+G+GGI K T+A AVFN IS  F
Sbjct: 190 HPIGLNYRVLELNWLLNHNTHAATATVGSHGLKLLGIYGMGGIGKTTLARAVFNFISPQF 249

Query: 203 EGSYFALNVREAEETGGIKDLQKKLLSELS------KDGNMRNIESQL----NRLARKKV 252
           +   F  +VRE     G+  LQ+ LL+ L+      KD  + +I   L    N L RKKV
Sbjct: 250 DAFCFLEDVRENSANHGLVHLQQTLLATLAGQKKKKKDFQLASISEGLLLLKNMLHRKKV 309

Query: 253 RIVFDDVTS-----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAH 295
            +V DDV S                 G+ +IITTRDK  L     +  Y+++EL   ++ 
Sbjct: 310 LLVLDDVNSSDQLQATLGRGLDTFGYGTTIIITTRDKHFLTTHGVHTTYKVEELTKDESL 369

Query: 296 KLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
           +L    AF  + +   +I+L ++    A G+PLAL+V+G YL G+  + WESA+   E I
Sbjct: 370 ELLSWNAFKTNKIYPDYIDLLNRVTTCASGLPLALEVIGSYLHGKGVKEWESALDSYEKI 429

Query: 356 PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------- 400
           P  +I+ +LK +Y++LD   + +FLDIACF +G    EV  +  A               
Sbjct: 430 PSKDIQTILKQTYNALDGDLRQLFLDIACFFKGYELSEVEYLLSAHHGYCFKPHRFRFLL 489

Query: 401 SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI 460
             SLI +D    ++MHDL+RDM REIVR+ES +HPGKR+RLW   DI +VL+KNTGT  I
Sbjct: 490 ETSLIKIDEHNHVKMHDLIRDMAREIVRQESPDHPGKRSRLWLTTDIVEVLEKNTGTSEI 549

Query: 461 EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC 520
           + I LD  +  + +  +  AF KM  L+ L     ++ C     + +P   +R LEW   
Sbjct: 550 QTIVLDFPRYEKMVRWDGKAFQKMTGLQTLII---RSLCFAEGPKNLP-NSLRVLEWWGY 605

Query: 521 PLKTLN--ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
           P ++L      +KL  LK+P +    L    +   S      T + F+  +CK++  +PD
Sbjct: 606 PSQSLPSYFYPKKLAVLKLPHSSFMSL----ELSKSKKFVNMTLLNFD--ECKIITHIPD 659

Query: 579 --ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
                NLE L++     + E+ +S+G L  ++ L L + + L  +P    HL+ L  L +
Sbjct: 660 VSGAPNLERLSLDSCENLVEIHDSVGFLDKLEILNLGSCAKLRNLPPI--HLTSLQHLNL 717

Query: 636 SHCERLQTLPELPCNLGLLSARNCTSL 662
           SHC  L + PE+  N+     +N TSL
Sbjct: 718 SHCSSLVSFPEILGNM-----KNITSL 739



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 94/259 (36%), Gaps = 66/259 (25%)

Query: 603  LSW---VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
            LSW   V  L LS N+    +P  I+    LT L + +C +L+ +  +P NL + SA  C
Sbjct: 832  LSWFSNVVELNLSANT-FTVLPTCIKECRFLTILILDYCRQLREIRGIPPNLEIFSAIRC 890

Query: 660  TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI---------------------VKDG 698
            TSL  L      +S+ +   L   +  D   L EI                      +  
Sbjct: 891  TSLNDLDLTNLLVSTKVCCPLRELVLDDCESLQEIRGIPPSIELLSARNCRSLTISCRRM 950

Query: 699  WMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA------GYNKLISF 752
             +   L+E     KS   PG ++P WF H+S G S +   R   PA      G    I  
Sbjct: 951  LLIQELHEAG--NKSFCLPGTQMPDWFEHRSKGHSISFWFRGKFPALSLCFVGLMHKIPT 1008

Query: 753  AFCAVVV-------------------FPAFLKYF-----RHKSGEDD---------WDGN 779
             F  +V+                   FP    +      RH   ED+         W+  
Sbjct: 1009 GFRPIVIINGNIMKTMLPAEKWFDFEFPVLTDHIFIVGERHIKFEDNMDEVLSENEWNHA 1068

Query: 780  VYAVCCDWKRKSEGHLYSW 798
            V ++  D+K  S G   +W
Sbjct: 1069 VISIDIDFKWSSSGLFAAW 1087


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 1915

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 265/763 (34%), Positives = 407/763 (53%), Gaps = 89/763 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL++ L    I TF DD+ L++G++I   L   IE S I II
Sbjct: 12  YDVFLSFRGEDTRKNFTDHLYNTLVAYGIHTFRDDEELLKGEDIKSGLSRAIEGSKIFII 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSE YA+S+W                      FY V PS V  QS SF   F    K  
Sbjct: 72  IFSENYAASKWCLNELAMIIEYTTLEDNKVIPVFYHVKPSDVGHQSESFEVAFFNHEKDA 131

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            ++ K    +W+  L +AA LSG+  +  + E+++I++I   ++ RL+         +VG
Sbjct: 132 DQEKKELIEKWRITLKKAAKLSGYHVDN-QHEAEVIQKIREVIITRLNRKPLYVGDNIVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +++++SL+    + V  + I+GIGGI K TIA A +N IS  F+GS F   V E  
Sbjct: 191 MDFHLKQLKSLVKTELDDVHMVGIYGIGGIGKTTIAMAFYNDISSRFDGSSFLRGVGEKS 250

Query: 216 ETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVT--------- 260
           + GG+ +LQKKL  ++ K      D     I     RL  K+V IV DDV          
Sbjct: 251 K-GGLLELQKKLFKDILKCESTDFDDTSEGINGIKKRLCSKRVLIVLDDVEELEQLENLA 309

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD--HLDAS 311
                  + S +IITT+D  +L     N  Y +KEL + +A  LF  WAF  +       
Sbjct: 310 GKNGWYGAKSTIIITTKDTSLLSQHGVNILYEVKELNHKEAIDLFNWWAFKQNIPKPKED 369

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
              L+   + YA+G+P+ALKVLG +L G+  + W+SA+ KLE IPH++++ VLK+SY+ L
Sbjct: 370 FESLSHCVVGYAKGLPIALKVLGGFLFGKKIDEWKSALHKLEKIPHMKVQSVLKVSYERL 429

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRD 421
           DD++K +FLDIACF +G+ +D V  I              + LI +    ++ MHDLL+ 
Sbjct: 430 DDTEKEIFLDIACFFKGKDKDLVSRILGRYADIGIKVLHERCLITISQ-NKLDMHDLLQQ 488

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+EIVR+E +  PGKR+RLW   D+  +L +NTGTEAIEG+ +++   N+ +  ++ +F
Sbjct: 489 MGQEIVRQECLKEPGKRSRLWDSNDVDSMLTRNTGTEAIEGLFVEIPTSNK-MQFSTNSF 547

Query: 482 SKMPKLRFLRFYGDKN-KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           +KM +LR    Y  +   C     E  P +++R+L +  C L++L  N     LV L + 
Sbjct: 548 TKMNRLRLFIVYNKRYWNCFKGDFE-FPSSQLRYLNFYGCSLESLPTNFNGRNLVELDLV 606

Query: 539 CTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLPDELEN 582
            + +++LW   +   S              +  F +    EI++   C  LE  P   EN
Sbjct: 607 RSGIKKLWKGDEIFNSLKVINLGYSKYLVEIPDFSSVPNLEILNLEGCTSLESFPKIKEN 666

Query: 583 LEYL---TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           +  L    + GT I E+P S+  L+ ++   LS   NL  +P SI +LS L  L++  C 
Sbjct: 667 MSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLYLDSCS 726

Query: 640 RLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           +L+  PE+  N+G L   N   T++E+L + +  + ++ +++L
Sbjct: 727 KLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDL 769



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 31/178 (17%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LPS++C  K+  T     C  L   P+    LENL  L ++GT I ELP S+  L 
Sbjct: 1349 NLESLPSTICELKSLTTLSCSGCSQLTIFPEIFETLENLRELHLEGTAIEELPSSIQHLR 1408

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL------------- 651
             ++ L L+  +NL  +PE+I  L  L FL  + C +L++ PE+  N+             
Sbjct: 1409 GLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILENIENLRELSLHGTAI 1468

Query: 652  -----------GL--LSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
                       GL  L   NC++L  LP  + ++  +  L VNLC+ L+  P  L  +
Sbjct: 1469 KELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQNLGSL 1526



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 11/133 (8%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRL 603
            +++  LP ++   K+ +      C  L+  P+ LEN+E L   ++ GT I+ELP S+ RL
Sbjct: 1419 NNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILENIENLRELSLHGTAIKELPTSIERL 1478

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
              ++ L LSN SNL  +PESI +L  L  L ++ C +L+  P+   NLG L       LE
Sbjct: 1479 GGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQ---NLGSLQ-----RLE 1530

Query: 664  KLPAGLSSMSSVL 676
             L A  S  + VL
Sbjct: 1531 LLGAAGSDSNRVL 1543



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 45/287 (15%)

Query: 410 FYRIRMHDLLRDM-GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
           FY   +  L  +  GR +V  + +    K+  LW   +I+  LK          I+L  +
Sbjct: 583 FYGCSLESLPTNFNGRNLVELDLVRSGIKK--LWKGDEIFNSLKV---------INLGYS 631

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
           K   EI      FS +P L  L   G       + LE  P      ++     L+ +N+ 
Sbjct: 632 KYLVEIP----DFSSVPNLEILNLEG------CTSLESFP-----KIKENMSKLREINLS 676

Query: 529 AEKLVSLKMPCTKVEQLWD----------DVQRLPSSLCTFKTPITFEIIDCKMLERLP- 577
              ++ +    + +E L            ++  LP S+C   +  T  +  C  L+  P 
Sbjct: 677 GTAIIEVP---SSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLYLDSCSKLKGFPE 733

Query: 578 --DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
             D + NLE L ++ T I EL  S+G L  +K L LS   NL  +PESI ++S L  L  
Sbjct: 734 MKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNG 793

Query: 636 SHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           S C +++  PE+  N+G L   +   T++E+LP  +  + ++  ++L
Sbjct: 794 SMCLKIKDFPEIKNNMGNLERLDLSFTAIEELPYSIGYLKALKDLDL 840



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 127/303 (41%), Gaps = 54/303 (17%)

Query: 472  REIHMNSYAFSKMPK-LRFLRFYGDKNKCMVSHLEGVP--FAEVRHLEWPQCP----LKT 524
            RE+H+   A  ++P  ++ LR     N    ++L  +P     ++ L +  C     LK+
Sbjct: 1388 RELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKS 1447

Query: 525  L-----NICAEKLVSLKMPCTKVEQLWDDVQRL-----------------PSSLCTFKTP 562
                  NI  E L  L +  T +++L   ++RL                 P S+C  +  
Sbjct: 1448 FPEILENI--ENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRFL 1505

Query: 563  ITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLG-------RLSWVKRLILSNNS 615
                +  C  LE+ P  L +L+ L + G    +    LG       R+S  K L LS N 
Sbjct: 1506 KNLNVNLCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAIQSDDCRMSSWKALNLSINY 1565

Query: 616  NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
                IP SI  LSKL  L +SHC++L  +PELP +L +L    C  LE     LSS SS+
Sbjct: 1566 FSSIIPISIIQLSKLRVLDLSHCQKLLQIPELPPSLRILDVHACPCLET----LSSPSSL 1621

Query: 676  LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSA 734
            L  +L    K    E        W K         +  +  PGN  IP+W   +  GS  
Sbjct: 1622 LGFSLFRCFKSAIEEFE--CGSYWSK---------EIQIVIPGNNGIPEWISQRKKGSEI 1670

Query: 735  TLK 737
            T++
Sbjct: 1671 TIE 1673



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL-TVKGTT---IRELPESLGRLS 604
           ++ L SS+   K     ++  CK L  LP+ + N+  L T+ G+    I++ PE    + 
Sbjct: 751 IEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNGSMCLKIKDFPEIKNNMG 810

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS---ARNCTS 661
            ++RL LS  + +E +P SI +L  L  L +S+C  L  LPE  CNL  L     RNC  
Sbjct: 811 NLERLDLSFTA-IEELPYSIGYLKALKDLDLSYCHNLVNLPESICNLSSLEKLRVRNCPK 869

Query: 662 LEKLPAGLSSMSSVL 676
           L++L   L   S +L
Sbjct: 870 LQRLEVNLEDGSHIL 884



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 31/233 (13%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLER--LPD--ELENLEYLTVKGTTIRELPESLGRLS 604
            +Q + + +    + +   + +C ++E   L D   L +L  L++    ++E  E L R+ 
Sbjct: 986  IQGILNDIWNLSSLVKLSLNNCNLMEVGILSDIWNLSSLVKLSLNNCNLKE-GEILNRIC 1044

Query: 605  WVKRL--ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
             +  L  +  + ++   IP  IR LS L  L + HC++LQ +PELP +L  L   +C  L
Sbjct: 1045 HLPSLEELSLDGNHFSSIPAGIRLLSNLRALNLRHCKKLQEIPELPSSLRDLYLSHCKKL 1104

Query: 663  EKLPA--------------GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER 708
              +P               G+SS+S+    +L N LK      S++ ++  +     E R
Sbjct: 1105 RAIPELPSNLLLLDMHSSDGISSLSN---HSLLNCLK------SKLYQELQISLGASEFR 1155

Query: 709  GIKKSMYFP-GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF 760
             +   +  P  + I +  R+QSMGS       P      N L+ FA C V V+
Sbjct: 1156 DMAMEIVIPRSSGILEGTRNQSMGSHQVRIELPQNWYENNDLLGFALCCVYVW 1208



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 9/105 (8%)

Query: 586  LTVKGTTIRELP--ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            L +KG+ I ELP  ES   L     L L    NLE +P +I  L  LT L  S C +L  
Sbjct: 1320 LCLKGSAINELPFIESPFELG---SLCLRECKNLESLPSTICELKSLTTLSCSGCSQLTI 1376

Query: 644  LPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL--CNFL 684
             PE+   L  L   +   T++E+LP+ +  +  + Y+NL  CN L
Sbjct: 1377 FPEIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNL 1421


>gi|147865361|emb|CAN84090.1| hypothetical protein VITISV_003077 [Vitis vinifera]
          Length = 1002

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 318/1004 (31%), Positives = 473/1004 (47%), Gaps = 170/1004 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VF+SFRGEDTR NFT HL+  L    I TF DD+ L +G +I+  LL  IE S I II
Sbjct: 21  YEVFISFRGEDTRKNFTDHLYTTLVAXGIXTFRDDEELEKGGDIASDLLRAIEESKIFII 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YA+SRW                      FY V+PS VRKQS S+G  F    K  
Sbjct: 81  IFSTNYANSRWCLNELVKIFECTTQKQSTILPIFYHVNPSDVRKQSGSYGDAFVDHEKDA 140

Query: 100 PEK----MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            EK    +++W+ AL + A L G   +  + E+ +++EI +D+++RL+    +  K +VG
Sbjct: 141 DEKKMEVIQKWRTALNQVASLCGLHVDE-QYETLVVKEITDDIIRRLNRKPLNVGKNIVG 199

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +E+++SL+ I    V  + I+GIGGI K TIA AV+N IS  F+GS F  NVRE  
Sbjct: 200 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAVYNDISYQFDGSSFLNNVRERS 259

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARK-------------KVRIVFDDVT 260
           +   ++ LQ++LL  +   K   + N++  +  + R                 +  +++ 
Sbjct: 260 KDNALQ-LQQELLHGILKGKSXKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLA 318

Query: 261 SG-------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTR K  L      + Y +  L  A+A +LF  WAF  +  +  + 
Sbjct: 319 EEHSWFGPRSRIIITTRHKHFLTQYGVKESYEVXXLHDAEAIELFSWWAFKQNLPNEIYK 378

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+ + + YA+G+PLAL VLG +L  ++   WESA+ KL+ IPH+ I+ VLKISYD LDD
Sbjct: 379 NLSYQVVDYAKGLPLALXVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGLDD 438

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA------------SKSLINLDLFYRIRMHDLLRD 421
            +K +FLDIACF +G+ +D V  + D              K LI++    ++ MHDLL+ 
Sbjct: 439 VEKGIFLDIACFFKGKDKDFVSRMLDEDFYAESGIGVLHDKCLISIS-GNKLDMHDLLQQ 497

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG EIVR+E    PG+R+RLW  +DI+ VLK+N G+E IEGI LD++ +   +   + AF
Sbjct: 498 MGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTEAF 557

Query: 482 SKMPKLRFLRFYGDKN---------------KCMVSHLEGVPFA--EVRHLEWPQCPLKT 524
           + M KLR L+ Y  K+                C V       F   ++R+L W    LK+
Sbjct: 558 AGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSLKS 617

Query: 525 L--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
           L  +   + LV L MP + +++LW  ++ L       K+  + ++   K L   PD   +
Sbjct: 618 LPKDFSPKHLVDLSMPYSHIKKLWKGIKVL-------KSLKSMDLSHSKCLIETPDFSGI 670

Query: 581 ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L ++G   + E+  SLG L  +  L L +   L R+P  I +   L  L +S C 
Sbjct: 671 TNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCS 730

Query: 640 RLQTLPELPCNLGLL------------------SARNCTSLEKLPAGLSSMS-------- 673
           + +  PE   NL +L                  S RN   L     G +S S        
Sbjct: 731 KFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGPASASWLWXKRSS 790

Query: 674 -SVLYV-----NLCNFLKLDPNELSEIVKDGWMKHSL-----YEERGIKKSMY------- 715
            S+ +      NLC   KLD ++ +  + DG    SL      E+  +  + +       
Sbjct: 791 NSICFTVPSSSNLCYLKKLDLSDCN--ISDGANLGSLGFLSSLEDLNLSGNNFVTLPNMS 848

Query: 716 ------------FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
                        PG+ IP W R+QS  S   ++   P     N L    F   +VF + 
Sbjct: 849 GLSHLDSDVAFVIPGSRIPDWIRYQS--SENVIEADLPLNWSTNCL---GFALALVFSSQ 903

Query: 764 LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF 823
                    E   D      CC  + +   HL       +   E DHV L         +
Sbjct: 904 PPVSHWLWAEVFLDFG--TCCCSIETQCFFHLEG--DNCVLAHEVDHVLL--------XY 951

Query: 824 GPNYDEFSFR--IHCSFHFPPYLERG-EVKKCGIHFVYAQDSAD 864
            P     S    IH    F    E G E+K+CG+  VY  +  +
Sbjct: 952 VPVQPSLSPHQVIHIKATFAITSETGYEIKRCGLGLVYVNEEVN 995


>gi|356515308|ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 264/777 (33%), Positives = 414/777 (53%), Gaps = 118/777 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L  + I  FIDD+ L RG+ IS +L+G IE S IAII
Sbjct: 20  YDVFLSFRGEDTRRTFTGSLYHGLHQRGINVFIDDEKLRRGEEISPALIGAIEESRIAII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      F+ VDPS VR Q  SF    ++   RF
Sbjct: 80  VFSQNYASSTWCLDELAKILECYKTRGQLVWPVFFHVDPSAVRHQRGSFATAMAKHEDRF 139

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               +K+++WK AL EAA+LSG+       E KLI+EI  +  ++L+ T     +  VG+
Sbjct: 140 KGDVQKLQKWKMALFEAANLSGWTLKN-GYEFKLIQEIIEEASRKLNHTILHIAEYPVGI 198

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           E  I E++ LL I   E +  + I+G+GGI K TIA A++N I+  FE + F  ++RE+ 
Sbjct: 199 ENRISELKLLLHIEPGEDIRVIGIYGLGGIGKTTIARALYNLIAGQFEATSFLTDIRESS 258

Query: 216 -ETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------- 261
            +  G+  LQ+ LL +   D N++       I     RL  KKV ++ DDV         
Sbjct: 259 NQRQGLVQLQETLLFDTVGDKNIKLGSIYKGIPIIKKRLCCKKVLLILDDVDKLEQLQAL 318

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS +IITTRDK +L     +K Y +K+L + +A  LF   AF     DA +
Sbjct: 319 AGGRDWFGFGSVIIITTRDKHLLAAQQVDKTYEVKKLNHDEAFDLFTWSAFKRKAPDAGY 378

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +++++ + YA+G+PLALKV+G  L G++ E W+SA+ K E IP+ E++ VL++++D+L+
Sbjct: 379 FDISNRVVLYAEGLPLALKVMGSNLFGKTVEEWKSALGKYEKIPNKEVQNVLRVTFDNLE 438

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           +++K +FLDIACF +GE  + +     A              +SL+++D + R+RMHDL+
Sbjct: 439 ENEKEIFLDIACFFKGETMEYIEKTLQACGLYPKFGISVLVDRSLVSIDKYDRLRMHDLI 498

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +DMGREIVR+ S   PGKR+RLW+H+D+++VL +NTGT  I+G+ +D+      +H+   
Sbjct: 499 QDMGREIVREVSPLEPGKRSRLWYHEDVFEVLSENTGTYRIQGMMVDLPD-QYTVHLKDE 557

Query: 480 AFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           +F KM  L+ L      F+G        HL       +R L+W + P  +L  +   +KL
Sbjct: 558 SFKKMRNLKILIVRSGHFFGSPQ-----HLPN----NLRLLDWMEYPSSSLPSSFQPKKL 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK- 589
           V L +  ++          +        +  + ++  C++L +LPD   + NL  L +  
Sbjct: 609 VVLNLSHSRF--------TMQEPFKYLDSLTSMDLTHCELLTKLPDITGVPNLTELHLDY 660

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---- 645
            T + E+ +S+G L  +  L     + L+  P ++R L+ L  L ++ C  LQ  P    
Sbjct: 661 CTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPSALR-LASLRSLILNWCSSLQNFPAILG 719

Query: 646 ----------------ELPCNLG------LLSARNCTSLEKLPAGLSSMSSVLYVNL 680
                           ELP ++G       LS  +C SL++LP     + +++ +++
Sbjct: 720 KMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKELPDNFDMLQNLINLDI 776



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 124/338 (36%), Gaps = 78/338 (23%)

Query: 444 HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG-DKNKCMVS 502
           H ++   L   TG   +  + LD      E+H +S  F  + KL  LR YG  K K   S
Sbjct: 637 HCELLTKLPDITGVPNLTELHLDYCTNLEEVH-DSVGF--LEKLVELRAYGCTKLKVFPS 693

Query: 503 HLEGVPFAEVRHLEWPQCP-LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKT 561
            L     A +R L    C  L+       K+ +LK     V      ++ LP S+     
Sbjct: 694 ALR---LASLRSLILNWCSSLQNFPAILGKMDNLK----SVSIDSTGIRELPPSIGNLVG 746

Query: 562 PITFEIIDCKMLERLPDE---LENLEYLTVKG--------TTIRELPESLGRLSWVKRLI 610
                +  C  L+ LPD    L+NL  L ++G        T +R++ +S      ++ L 
Sbjct: 747 LQELSMTSCLSLKELPDNFDMLQNLINLDIEGCPQLRSFLTKLRDMGQSTLTFGNIQSLN 806

Query: 611 LSN------------------------NSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           L N                         ++   +P  I+    L  L + +C++LQ +P 
Sbjct: 807 LENCGLIDEDLPIIFHCFPKVSSLVLSKNDFVALPICIQEFPCLELLHLDNCKKLQEIPG 866

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE 706
            P N+  ++ARNCTSL    + L                              +    +E
Sbjct: 867 FPPNIQYVNARNCTSLTAESSNL-----------------------------LLSQETFE 897

Query: 707 ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
           E   +  +  PG  +P+WF H + G   T   R   PA
Sbjct: 898 E--CEMQVMVPGTRVPEWFDHITKGEYMTFWVREKFPA 933


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 260/733 (35%), Positives = 378/733 (51%), Gaps = 134/733 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR  FT HL                  RG+ I+ +L+  IE S  +II+
Sbjct: 13  YDVFLSFRGEDTRYTFTDHLR-----------------RGELITPALVTAIEGSRHSIIV 55

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRLR 96
            SE YASS+W                      FY V+PS V  Q  SFG+    H  +L+
Sbjct: 56  LSENYASSKWCLDELVKILQSQNTKERRAVPIFYNVNPSDVGNQRGSFGKALADHEEKLK 115

Query: 97  KRFPEKMKR-------WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK 149
               +K+K        W+ ALT+   +SGF S+  + E++ IEEI  D+ K L+    S 
Sbjct: 116 ADHEKKLKYDMERVQGWRKALTQVGKISGFTSSRDKSETQFIEEIVTDISKDLNCVSSSD 175

Query: 150 NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
           +K LVG+ C I ++ESLLC+ S  V  + IWG+GGI K T+A  ++ ++   FEG  F  
Sbjct: 176 SKNLVGMNCCIRKLESLLCLESTKVLMVGIWGMGGIGKTTLARVIYERLFCQFEGYCFL- 234

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMR-NIESQLNRLARKKVRIVFDDVT-------- 260
              E  ++  + +L+ +LLS++  + N+   + S   RL  KKV +V DDV         
Sbjct: 235 ---EGLKSTSMDNLKAELLSKVLGNKNINMGLTSIKARLHSKKVLLVIDDVNHQSMLETL 291

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTRDK +L     +  Y++++L                       
Sbjct: 292 VGGHDWFGPQSRIIITTRDKHLLTVQGVDVVYKVQKL---------------------ED 330

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L D+   YAQG+PLALKVLGC LC R+ + W   + +L+  P+ EI+EVL+IS+  L 
Sbjct: 331 DNLLDQITSYAQGLPLALKVLGCSLCDRNADYWTDMLNQLKKFPNEEIQEVLQISFRGLK 390

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D++K++FLDIACF  G  +  V  I ++              KSLI L    R+ MHDLL
Sbjct: 391 DNEKDIFLDIACFFRGRGKTFVRKILESCGFTVVSGIENLIDKSLITLTRDNRLEMHDLL 450

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MG +IVRK S   PGKR+RLW  KDI  +LK  TG + +EGI  +++ +  E++  + 
Sbjct: 451 QEMGWQIVRKTS-KEPGKRSRLWEQKDISHILKWETGAQEVEGIFFNLSGL-EEMNFTTK 508

Query: 480 AFSKMPKLRFLRFY-------GDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NIC 528
           AFS+M  LR L  Y       G K +C +   +   F   E+R+L W + P ++L  +  
Sbjct: 509 AFSQMTNLRLLEIYRSNLRDTGGKMQCKLHISDDFKFHYDELRYLHWDEYPCESLPSDFE 568

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDC---KMLERLPD--ELENL 583
           +E LV   MP + + QLW   Q++   L         E +D    + L++ PD     NL
Sbjct: 569 SENLVHFCMPRSHLTQLWKG-QKVFGHL---------EFVDVSYSQYLKKTPDFSRATNL 618

Query: 584 EYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           E L +KG T +R++  SLG LS +  L + N  NLE +P SIR L  L    +S C +L+
Sbjct: 619 EVLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLP-SIRWLVSLRTFILSGCSKLE 677

Query: 643 TLPELPCNLGLLS 655
            L E+P ++  LS
Sbjct: 678 KLQEVPQHMPYLS 690



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 124/307 (40%), Gaps = 68/307 (22%)

Query: 580  LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            L +L YL + GT+I  LP +L RLS +KRL L+N                        C 
Sbjct: 764  LTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTN------------------------CR 799

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLP--AGLSSMSSVLYVNLCNF------LKLDPNEL 691
            RLQ LP LP ++  ++A NCTSLE +   +        L+ N          ++ D   +
Sbjct: 800  RLQALPVLPSSIECMNASNCTSLELISPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQSV 859

Query: 692  SEIVKDGWMKHSL---YEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
            +     G  + +    +    I  S  FPG+EIP WFRH S G    ++  PP     + 
Sbjct: 860  ASHAVPGTWRDTYAIWHPNVAIPFSTVFPGSEIPDWFRHHSQGHEINIEV-PPDWYINSN 918

Query: 749  LISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCC-----DWKRKSEGHLYSWFLGKI 803
             + FA  AV+                  D   + + C     D    S  H    F G  
Sbjct: 919  FLGFALSAVMA--------------PQHDSRAWCMYCDLDTHDLNSNSNSHRICSFFGSW 964

Query: 804  SY------VESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFV 857
            +Y      +ESDHV+L   ++   +F  + +++S   H  F F        VK CG   V
Sbjct: 965  TYQLQRTPIESDHVWL---AYVPSFFSFSREKWS---HIKFSFSSS-GGCVVKSCGFCPV 1017

Query: 858  YAQDSAD 864
            Y + ++D
Sbjct: 1018 YIKGTSD 1024


>gi|359493412|ref|XP_002280045.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1077

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 267/723 (36%), Positives = 381/723 (52%), Gaps = 120/723 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+  L  K I TFIDD +L RG  IS +L+  IE S  +II
Sbjct: 16  YDVFLSFRGEDTRNNFTAHLYQELRTKGINTFIDDDKLERGRVISPALVTAIENSMFSII 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS+W                      FY VDPS VR     FG   +   K  
Sbjct: 76  VLSENYASSKWCLEELAKILECMKTRGQRVLPIFYNVDPSDVRNHRGKFGAALAEHEKNL 135

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E M+R   WK+ALT+ A+LSG++S   + E  LI+EI   VL +L        + LVG+
Sbjct: 136 TENMERVQIWKDALTQVANLSGWESRN-KNEPLLIKEIVKHVLNKLLNICSGDTEKLVGI 194

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+EI+  L + S+ V  + IWG+GGI K T+A A++N+ISR FE   F  +V +   
Sbjct: 195 DARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVLA 254

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             G+  LQ+  LS L   KD NM+ + S   RL  KKV +V D+V               
Sbjct: 255 NEGLIKLQQIFLSSLLEEKDLNMKGLTSIKARLHSKKVLVVLDNVNDPTIFECLIGNQDW 314

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IIT RDK ++ +      Y + +    +A++     +   + L    +EL+  
Sbjct: 315 FGRGSRIIITARDKCLISH--GVDYYEVPKFNSDEAYEFIKCHSLKHELLRGDFMELSTS 372

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I YAQG+PLALKVL   L   SKE   + + KL+   + +IEEVL+ISYD LDD +KN+
Sbjct: 373 MIGYAQGLPLALKVLRPILFSMSKEESRNQLDKLKSTLNKKIEEVLRISYDGLDDKEKNI 432

Query: 379 FLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMGREI 426
           FLDIACF +GE +D VI I D          +SLI+  L      + +MHDL+++MG EI
Sbjct: 433 FLDIACFFKGEDKDYVIEILDGCGFFPLCGIRSLIDKSLISIYGNKFQMHDLIQEMGLEI 492

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR++S+   GKR+RL  H+DIY VLKKNTG+E IEGI L++  +   I   + AF+ M  
Sbjct: 493 VRQQSLQELGKRSRLLFHEDIYDVLKKNTGSEKIEGIFLNLFHLQETIDFTTQAFAGM-- 550

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLW 546
                 YG   K + +                          A+ LV L MPC+++EQLW
Sbjct: 551 ----NLYGYSLKSLPNDFN-----------------------AKNLVHLSMPCSRIEQLW 583

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENLEYLTVKGTTIRELPESLGRLSW 605
             +                     K+LE+L   +L + +YL        E P +L R++ 
Sbjct: 584 KGI---------------------KVLEKLKRMDLSHSKYLI-------ETP-NLSRVTN 614

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSL 662
           ++RL+L +  +L ++  S+R L  L FL + +C+ L++LP  P +L    +L    C+  
Sbjct: 615 LERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKF 674

Query: 663 EKL 665
           E+ 
Sbjct: 675 EQF 677



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 34/149 (22%)

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
           +N   +P ++  LS+L  + + +C RLQ LP+LP ++GLL ARNCTSL+ + + L     
Sbjct: 782 NNFVTLP-NLSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKNVQSHLK---- 836

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
                            + +++   +   LY           PG+ +P W R++S G   
Sbjct: 837 -----------------NRVIRVLNLVLGLY--------TLTPGSRLPDWIRYKSSGMEV 871

Query: 735 TLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
            +   PP     N L    F   +V P F
Sbjct: 872 -IAELPPNWFNSNFL---GFWFAIVVPKF 896


>gi|357485385|ref|XP_003612980.1| NBS resistance protein [Medicago truncatula]
 gi|355514315|gb|AES95938.1| NBS resistance protein [Medicago truncatula]
          Length = 996

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 274/781 (35%), Positives = 402/781 (51%), Gaps = 124/781 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF+SFRGED    F  HL    S K I  F+DD+L RG++IS SL   IE S I++I
Sbjct: 172 IYDVFVSFRGEDIHHGFLGHLFKAFSQKQINVFVDDKLKRGNDISHSLFEAIEGSFISLI 231

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSE YASSRW                      FY VDP+ VR Q  S+   F  L KR+
Sbjct: 232 IFSENYASSRWCLEELVKIIECKEKYGQIVIPVFYGVDPTDVRHQKKSYENAFVELGKRY 291

Query: 100 -PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              +++ W+N L  +A+LSG  S+  R +++L+EEI   VLKRL+     K KGL+G+E 
Sbjct: 292 NSSEVQIWRNTLKISANLSGITSSSFRNDAELLEEIIKLVLKRLNK-HPVKTKGLIGIEK 350

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           +I  +E LL   SE V  + IWG+GGI K TIA  +FN+I   +EG  F   V E     
Sbjct: 351 AIAHLEPLLHQESEKVRVIGIWGMGGIGKTTIAEEIFNQICSEYEGCCFLAKVSEELGRH 410

Query: 219 GIKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
           GI  L++KL+S L        S +G    I+    R+   KV IV DDVT          
Sbjct: 411 GIAFLKEKLVSTLLAEDVKIDSSNGLPSYIQ---RRIGHMKVLIVLDDVTEEGQLEMLFG 467

Query: 261 ------SGSRVIITTRDKQVL---KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                 S SR+IITTRDKQVL   +    +  Y ++ L  ++A  LF   AF   HL+  
Sbjct: 468 TLDWFRSDSRIIITTRDKQVLIANEVVDDDALYEVRVLDSSEALALFNLNAFKQSHLENE 527

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             +++ + + YA+G+PL LKVL   L G++KE+WES + KL+ +P  ++ +V+++S+D L
Sbjct: 528 FYDVSKRVVDYAKGIPLVLKVLAHMLRGKNKELWESQLDKLKRLPIQKVHDVMRLSFDDL 587

Query: 372 DDSQKNVFLDIACFLEG-----EHRDEVISIFDA------------SKSLINLDLFYRIR 414
           D  ++  FLDIACF  G     E+   ++  +++             K+LI +     I 
Sbjct: 588 DRLEQKYFLDIACFFNGMSLKVEYMKLLLKDYESDNSVAIGLERLKDKALITISKDNVIS 647

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHD+L++MGRE+VR+ES   P K +RLW    IY VLK + GT+AI  IS+D++ + R++
Sbjct: 648 MHDILQEMGREVVRQESSEDPRKCSRLWDPDIIYDVLKNDKGTDAIRSISVDLSAI-RKL 706

Query: 475 HMNSYAFSKMPKLRFLRFYG-DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
            ++   F KM  L+FL F+  D    +   L+  P  ++R+L W   PLK+       + 
Sbjct: 707 KLSPPVFDKMTNLKFLYFHDIDGLDRLPQGLQFFP-TDLRYLYWMHYPLKSFPEKFSVDN 765

Query: 532 LVSLKMPCTKVEQLWDDVQRLPS----SLC---------TFKTPITFEIID--------- 569
           LV L +P + VE+LW  VQ L +    +LC          F      ++++         
Sbjct: 766 LVILGLPYSLVEKLWCGVQDLVNLKQVTLCHSKYLKELPDFSNATNLKVLNMRWCNRLID 825

Query: 570 -------------------------CKMLERLPDELENLEYLTVKGTTIRELPESLGRLS 604
                                    CK L +    LEN+  L +   +I+ LP S G  S
Sbjct: 826 NFCFSLATFTRNSHLTSLKYLNLGFCKNLSKFSVTLENIVELDLSCCSIKALPSSFGCQS 885

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            ++ L+L   + +E IP SI +L++   L I  C +L  +P LP +L  L    C SL+ 
Sbjct: 886 KLEVLVLL-GTKIESIPSSIINLTRRRVLDIQFCSKLLAVPVLPSSLETLIVE-CKSLKS 943

Query: 665 L 665
           +
Sbjct: 944 V 944


>gi|357499249|ref|XP_003619913.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494928|gb|AES76131.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1018

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 289/898 (32%), Positives = 436/898 (48%), Gaps = 163/898 (18%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRG DTR+ FT +L+  L  K I+TF DD  L RGD I+ SL+  IE S I I IF
Sbjct: 9   VFLSFRGSDTRNTFTGNLYKALVDKGIRTFFDDNDLQRGDEITPSLVKAIEESRIFIPIF 68

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP- 100
           S  YASS +                      FY V+P+H+R QS S+G + ++  +RF  
Sbjct: 69  SANYASSSFCLDELVHIIHCYKTKSCLVLPVFYDVEPTHIRHQSGSYGEYLTKHEERFQN 128

Query: 101 -----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                E++++WK ALT+AA+LSG+  +    E K IE+I  D+   ++  F +  K  VG
Sbjct: 129 NEKNMERLRQWKIALTQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLNVAKYPVG 188

Query: 156 VECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  IE+++ LL +GSE V  +  ++G GG+ K T+A AV+N ++  FEG  F  NVRE+
Sbjct: 189 LQSRIEQVKLLLDMGSEDVVHMVGLYGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVRES 248

Query: 215 EETGGIKDLQKKLLSELSK-DGNMRNIESQL----NRLARKKVRIVFDDVTS-------- 261
                +K LQKKLLS++ K DG + ++   +     RL+RKK+ ++ DDV          
Sbjct: 249 STLKNLKHLQKKLLSKIVKFDGKLEDVSEGIPIIKERLSRKKILLILDDVDKLEQLEALA 308

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSRVIITTRDK +L        + ++EL   +A +L  + AF  D + +++ 
Sbjct: 309 GGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSTYE 368

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           E+ ++ + YA G+PLA+  +G  L GR  E W+  + + E IP+ +I+ +L++SYD+L+ 
Sbjct: 369 EILNRVVTYASGLPLAIVTIGDNLFGRKVEDWKRILDEYENIPNKDIQRILQVSYDALEP 428

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLI-NLDLFYRIRMHDL 418
            +K+VFLDIAC  +G    +V  I                A KSLI + +   ++ +HDL
Sbjct: 429 KEKSVFLDIACCFKGCKWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTQMTLHDL 488

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + DMG+EIVR+ES  +PG+R+RLW H DI+ VL+ NTGTE IE I L      RE   + 
Sbjct: 489 IEDMGKEIVRQESPKNPGERSRLWFHDDIFDVLRDNTGTENIEMIYLKYGLTARETEWDG 548

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK----LVS 534
            AF+KM  L+ L     K     S   G   + +R+LEW     K+L+    K    +  
Sbjct: 549 MAFNKMTNLKTLIIDDYK----FSGGPGYLPSSLRYLEWIDYDFKSLSCILSKEFNYMKV 604

Query: 535 LKMPCTKVEQLWDDVQRLPS----------SLCTFKTPI--------------------- 563
           LK+  +       DV  LP+          SL T  + I                     
Sbjct: 605 LKLDYSSDLTHIPDVSGLPNLEKCSFQFCFSLITIHSSIGHLNKLEILNAYGCSKLEHFP 664

Query: 564 --------TFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILS 612
                    FEI  C+ L+  P+   ++ N++ + +   +I ELP S    S ++RL +S
Sbjct: 665 PLQLPSLKKFEISKCESLKNFPELLCKMRNIKDIKIYAISIEELPYSFQNFSELQRLKIS 724

Query: 613 NN----------------SNLERI------------PESIRHLSKLTFLFISHCERLQTL 644
                             SN+E +            P  ++    +TFL +S       L
Sbjct: 725 RCYLRFRKYYDTMNSIVFSNVEHVDLAGNLLSDECLPILLKWFVNVTFLDLSCNYNFTIL 784

Query: 645 PEL--PCN-LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
           PE    C+ L  L+ R C +LE++  G+      L+ + C+ L      +    K     
Sbjct: 785 PECLGECHCLRHLNLRFCGALEEI-RGIPPNLESLFADNCDSLSSSSRRMLMSQK----- 838

Query: 702 HSLYEERGIKKSMYFPGN--EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
                E G     +FP     IP WF HQS G + +       P+     ISF F  +
Sbjct: 839 ---LHESGCTH-FHFPNTTGRIPDWFEHQSRGETISFWFDKELPS-----ISFTFIII 887


>gi|357499381|ref|XP_003619979.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494994|gb|AES76197.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1033

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 283/869 (32%), Positives = 424/869 (48%), Gaps = 165/869 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG DTR  FT +L+  LS K I+TFIDD +L +GD I+ SLL  IE S IAII
Sbjct: 19  FDVFISFRGTDTRFGFTGNLYKALSDKGIRTFIDDKELQKGDEITPSLLKRIEESRIAII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY V+PSHVR Q++S+G   ++  +RF
Sbjct: 79  VFSKEYASSSFCLDELVHIIHYFKEKGRLVLPVFYDVEPSHVRHQNYSYGEALAKHEERF 138

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKG 152
                  E++ +WK AL + ADLSG+  N+    E   IE+I  DV  +++         
Sbjct: 139 QKSKKNMERLLKWKIALNKVADLSGYHFNLGNEYERDFIEKIVTDVSYKINHVPLHVADY 198

Query: 153 LVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  I E+ SL  +GS +GVC + I G GG+ K T+A AV+N I+  FE   F  NV
Sbjct: 199 LVGLKSRISEVNSLSELGSNDGVCMIGILGTGGMGKTTLAQAVYNLIANQFECKCFLHNV 258

Query: 212 REAEETGGIKDLQKKLLSEL----SKDGNM-RNIESQLNRLARKKVRIVFDDVTS----- 261
           RE     G++ LQ++LLS+     +K G++   I     RL +KKV ++ DDV       
Sbjct: 259 RENSVKHGLEYLQEQLLSKSIGFETKFGHVNEGIPIIKRRLYQKKVLLILDDVDKIKQLQ 318

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +L      K Y    L    A +L    AF  +  D+
Sbjct: 319 VLIGEPGWLGRGSRVIITTRDKHLLSCHGIKKIYEADGLNKEQALELLRMMAFKSNKNDS 378

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            +  + ++A+KYA G+PLAL+V+G  L G++    ES + K E IPH +I+++LK+S+D+
Sbjct: 379 RYDSILNRAVKYAAGLPLALEVVGSNLFGKTIAECESLLDKYERIPHEDIQKILKVSFDA 438

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVIS-----------------IFDASKSLINLDLFYRI 413
           LD+ Q+NVFLDI C  +G H +E I                  + D S   I  + +  +
Sbjct: 439 LDEEQQNVFLDIVCVFKG-HPEEYIQNLLHDHYGYCIKSHLRVLVDKSLIKIKANYYCGV 497

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            +HDL+ DMG EI+R+ESI  PG+R+RLW   DI  VL++NTGT  IE I LD +     
Sbjct: 498 TLHDLIEDMGIEIIRQESIREPGERSRLWSRDDIVHVLQENTGTSKIEMIYLDRSIAKHL 557

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE--------VRHLEWPQCPLKTL 525
             MN   F KM  L+ L           +  EG  F++        +R LE   C  ++L
Sbjct: 558 RGMNEMVFKKMTNLKTLHIQS------YAFTEGPNFSKGPKYLPSSLRILECNGCTSESL 611

Query: 526 NICAE--------KLVSLK-------------MP---------CTKVEQLWDDVQRLP-- 553
           + C          K+++L              +P         C ++  + + V  L   
Sbjct: 612 SSCFSNKKKFNNMKILTLDNSDYLTHIPDVSGLPNLKNFSFQGCVRLITIHNSVGYLNKL 671

Query: 554 -----------SSLCTFKTPITFE--IIDCKMLERLPD---ELENLEYLTVKGTTIRELP 597
                       S  + + P   E  + +C+ L+  P+   ++ N++ +T+  T+I ELP
Sbjct: 672 KILNAEYCEQLESFPSLQLPSLEELKLSECESLKSFPELLCKMTNIKEITIYETSIGELP 731

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
            S G LS ++RLI+ ++ N + +PE +     L  + +  C  L+ +  +P NL  LSA 
Sbjct: 732 FSFGNLSELRRLIIFSD-NFKILPECLSECHHLVEVIVDGCYSLEEIRGIPPNLERLSAV 790

Query: 658 NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
           +C SL      +  +S  L    C ++                              +FP
Sbjct: 791 DCESLSSASRRM-LLSQKLNKAGCTYI------------------------------HFP 819

Query: 718 GNE--IPKWFRHQSMGSSATLKTRPPRPA 744
                IP WF HQ+ G + +   R   P+
Sbjct: 820 NKTEGIPDWFEHQTRGDTISFWFRRKIPS 848


>gi|357449987|ref|XP_003595270.1| Heat shock protein [Medicago truncatula]
 gi|355484318|gb|AES65521.1| Heat shock protein [Medicago truncatula]
          Length = 1819

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 292/898 (32%), Positives = 451/898 (50%), Gaps = 160/898 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+NFT  L+ +L    I TF D+Q I +G+ I+ SLL  I+ S I I+
Sbjct: 14  YDVFISFRGIDTRNNFTRDLYDILDQNGIHTFFDEQEIQKGEEITPSLLQAIQQSRIFIV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPS VR QS ++G    +  +RF
Sbjct: 74  VFSNNYASSTFCLNELVMILDCSNTHRRLLLPVFYDVDPSQVRHQSGAYGEALKKHEERF 133

Query: 100 PE---KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   K+++W+++L +AA++SG+   +  + E + I  I  +V K+++ T        V 
Sbjct: 134 SDDKDKVQKWRDSLCQAANVSGWHFQHGSQSEYQFIGNIVEEVTKKINRTPLHVADNPVA 193

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFN-KISRHFEGSYFALNVRE 213
           +E  + E+ SLL IGS EG   + I+G GG+ K T+A AV+N +IS  F+G  F  ++RE
Sbjct: 194 LESPVLEVASLLRIGSDEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRE 253

Query: 214 AEETGGIKDLQKKLLSEL--SKD---GNM-RNIESQLNRLARKKVRIVFDDVT------- 260
                G+  LQ+ LLSE+   KD   GN+ R I     RL RKKV +V DDV        
Sbjct: 254 NAINHGLVQLQETLLSEILCEKDIRVGNVSRGISIIKRRLQRKKVLLVLDDVDKAKQIQV 313

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGS++IITTRDK +L        Y +K+L +  + +LF   AF    +D  
Sbjct: 314 LAGGHYWFGSGSKIIITTRDKHLLAIHEILNLYEVKQLNHEKSLELFNWHAFRNRKMDPC 373

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +++++A+ YA G+PLAL+V+G +L G+  +VW+SA+ K E I H +I EVLK+SYD L
Sbjct: 374 YNDISNRAVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKVSYDDL 433

Query: 372 DDSQKNVFLDIACF---LEGEHRDEVISI--FDA--------SKSLINLDLFYRIRMHDL 418
           D   K +FLDIACF    E  +  E++ +  F A         KSLI +D    +RMHDL
Sbjct: 434 DKDDKGIFLDIACFYNSYEMGYAKEMLYVHGFSAENGIQVLTDKSLIKIDGNGCVRMHDL 493

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           ++DMGREIVR+ES   PGKR+RLW   DI  VL++NTGT+ +E I +D+   ++E+  + 
Sbjct: 494 VQDMGREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYN-DKEVQWSG 552

Query: 479 YAFSKMPKLRFL-----RFY------------------------GDKN-----------K 498
            AF  M  L+ L     RF                         GD N            
Sbjct: 553 TAFENMKNLKILIIRSARFSRGPKKLPNSLGVLDWSGYSSQSLPGDFNPKKLMMLSLHES 612

Query: 499 CMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPS---S 555
           C++S      F  +  L++  C L T       LV+L   C       DD   L +   S
Sbjct: 613 CLISFKSLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALC------LDDCTNLIAVHKS 666

Query: 556 LCTFKTPITFEIIDCKMLERL-PD-ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILS 612
           +      +      C  LE L P+  L +LE L ++G   ++  PE LG +  ++ + L 
Sbjct: 667 VGFLNKLVLLSTQRCNQLELLVPNINLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLD 726

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCTSL------ 662
             S ++++P SIR+L  L  LF+  C  L  LP+    LP  L +++A  C         
Sbjct: 727 QTS-IDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILP-KLEIITAYGCIGFRLFEDK 784

Query: 663 EKLPAGLSSMSSVLY------------VNLC----------NFLKLDPNELSEIVKDGWM 700
           EK+ + +   + ++Y            +N+C          +F++++ + +S  + +G  
Sbjct: 785 EKVGSKVFPKAMLVYKEGSPVLLDMSSLNICPDNAIEVFCSSFIRMNADFISIGILEG-- 842

Query: 701 KHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           + + Y+    + S++F       WF+++    +     +PP   G N L+ F F  ++
Sbjct: 843 RGNWYQHESNESSLHF-------WFQNKFPKIALCCAVKPPVCKG-NMLLDFNFSVLI 892


>gi|359486980|ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 852

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 260/749 (34%), Positives = 393/749 (52%), Gaps = 106/749 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRGEDTR  FT HL+  L    I+TF DD+ L RG  I+  LL  IE S I +I
Sbjct: 25  YEVFLSFRGEDTRYGFTDHLYEALISCGIRTFRDDEELARGGIIASELLEAIEESKIFVI 84

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSE YA+SRW                      FY VDPSHVRKQ  S+ + F    K  
Sbjct: 85  IFSENYAASRWCLDELVKISECGATEGRRILPIFYHVDPSHVRKQRGSYEKAFVDHEKEA 144

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ-SKNKGLV 154
            E    K+++W++AL +  +L+G+D    + E++LI+EI + +LK L++      +K +V
Sbjct: 145 DEEKREKIQKWRSALAKVGNLAGYDLQKYQYEARLIKEIIDVILKELNSKLLLHVSKNIV 204

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G+   +E+++SL+ I S  V  + I+G+GGI K TIA  V+N IS  FE   F  NVRE 
Sbjct: 205 GMNFHLEKLKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRER 264

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTS------ 261
           +++   +  LQK+LL+ + K  N +  N+   +N    R   KKV ++ DDV +      
Sbjct: 265 SKDYSSLLQLQKELLNGVMKGKNKKISNVHEGINVIRNRFHSKKVLLILDDVDNLKQLQF 324

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      SR+IIT+RD+  L     +  Y+++ L Y ++ +LFCQ AF  +   + 
Sbjct: 325 LAGEHSWFGPRSRIIITSRDQHCLNVHGVDASYKVEALSYKESIQLFCQHAFKQNIPKSD 384

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           ++ L+D  + Y +G+PLAL+VLG +L  +S   WESA++KL+  P++E++ VLKIS+D L
Sbjct: 385 YVNLSDHVVNYVKGLPLALEVLGSFLFYKSVPEWESALQKLKENPNIEVQNVLKISFDGL 444

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDM 422
           D  ++ +FLDI CF +G + ++V  +           + K LI L     I +HDL+ +M
Sbjct: 445 DKKEQEIFLDIVCFFKGWNENDVTRLVKHARIGIRVLSDKCLITL-CGNTITIHDLVEEM 503

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREIVR +    PGK +RLW  KDI  VL+K  GT+A+E + LDM K +REI   + AF 
Sbjct: 504 GREIVRHKHPEEPGKWSRLWDPKDISLVLRKKMGTKAVEALFLDMCK-SREISFTTEAFK 562

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           +M +LR L+ Y             + +    +L W    LK+L  N   E L+ L +  +
Sbjct: 563 RMRRLRLLKIYWSWG--------FLNYMGKGYLHWEGYSLKSLPSNFDGENLIELNLQHS 614

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKGTTIRELPE 598
            +E LW   + L       +      + + + L  +P    + NLE L VKG        
Sbjct: 615 NIEHLWQGEKYL-------EELKILNLSESQQLNEIPHFSNMSNLEQLNVKGC------- 660

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
                            +L+ +  S+  L KLT L +  C+++++LP    NL  L   N
Sbjct: 661 ----------------RSLDNVDSSVGFLKKLTLLNLRGCQKIRSLPSTIQNLVSLKKLN 704

Query: 659 ---CTSLEKLPAGLSSMSSVLYVNLCNFL 684
              C++LE  P  +  M  +  +NL   L
Sbjct: 705 LYDCSNLENFPEIMEDMECLYLLNLSGTL 733


>gi|356532838|ref|XP_003534977.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1055

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 302/1011 (29%), Positives = 468/1011 (46%), Gaps = 222/1011 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D R +F SHL     +K I  F+D++L +G+ I +SL+  IE S I++II
Sbjct: 12  YDVFVSFRGKDIRQDFLSHLVEAFDMKRIYAFVDNKLEKGEKIWKSLVEAIEGSLISLII 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSH-SFGRHFSRLRKRF 99
           FS+ YASS W                      FY ++P+HVR QS  +F + F++  K++
Sbjct: 72  FSQGYASSHWCLEELEKIHECKEKYGQIIIPVFYHLEPTHVRYQSSDAFEKAFAKHGKKY 131

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K+++W++ L ++ADLSG +S+  + +++L+++I N V  RL  T     K LVG+   
Sbjct: 132 ESKVQQWRDILKKSADLSGIESSNFKTDAELVKKITNVVQMRLHKT-HVNLKRLVGIGKK 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I ++E L+    E +  + +WG+GGI K  +A  VF K+   + G  F  N RE     G
Sbjct: 191 IADVELLIRKEPEDIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANEREQSRKHG 250

Query: 220 IKDLQKKLLSELSKDGNMRNIESQL-----NRLARKKVRIVFDDVT-------------- 260
           +  L++K+ SEL  +G   +  + L      R+ R KV IV DDV               
Sbjct: 251 MLSLKEKVFSELLGNGVKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKLLGPLGN 310

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+TTRD QVLK   A++ Y ++E     A +LF    F        +  L+ +
Sbjct: 311 FGSGSRIIVTTRDMQVLKANKADEVYPLREFSLNQALELFNLNFFNQCDDQREYDNLSKR 370

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YA+G+PL L  L   L  R+KE W S + KLE IP  E+ + +K+SYD LD  ++ +
Sbjct: 371 VVNYAKGIPLVLNELAYLLRARNKEEWGSELDKLEKIPLPEVYDRMKLSYDDLDPKEQQI 430

Query: 379 FLDIACFL------------------EGEHRDEVISIFD--ASKSLINLDLFYRIRMHDL 418
           FLD+A F                   +GE  D V  + +    K+LI       I MHD 
Sbjct: 431 FLDLAFFFGRSHTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSKDNFISMHDS 490

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+ M +EIVR++S N  G  +RLW   DI+  +K +  TEAI  I +++ K+ +E  +  
Sbjct: 491 LQVMAQEIVRRKSSN-TGSHSRLWDLDDIHGEMKNDKVTEAIRSIQINLPKI-KEQKLTH 548

Query: 479 YAFSKMPKLRFLRFYGDKN----KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + F+KM  L+FL+  G+ N    + +++       +E+R L W  CPLK+L  +   EKL
Sbjct: 549 HIFAKMSSLKFLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSLPKSFSKEKL 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPS--------------------------------SLCTFK 560
           V LK+  +K+E+LWD VQ L +                                S+ T  
Sbjct: 609 VMLKLLRSKIEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLLRGCSMLTSV 668

Query: 561 TPITFEIID--------CKMLERLPD---------ELE---NLEYLTVKGTTIRELPESL 600
            P  F +I         C  L  L            LE   NL   +V    +++L    
Sbjct: 669 HPSVFSLIKLEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSMNMKDL---- 724

Query: 601 GRLSWVK--------------RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            RL W K              +L+    S +ER+P S  +L++L  L +S+C  LQT+PE
Sbjct: 725 -RLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQTIPE 783

Query: 647 LPCNLGLLSARNCTSLEKLPA---GLSSMSSV---------------------LYVNLCN 682
           LP  L  L+A++CTSL  LP     + ++S++                       V   N
Sbjct: 784 LPPLLKTLNAQSCTSLLTLPEISLSIKTLSAIDCKSLETVFLSSAVEQLKKNRRQVRFWN 843

Query: 683 FLKLDPNELSEIV-------------------KDGWMKHSLYE--ERGIKKSMYFPGNEI 721
            L L+ + L  I                    +D    +  Y+   R  +    +PG+ +
Sbjct: 844 CLNLNKDSLVAIALNAQIDVMKFANQHLSPPSQDLVQNYDDYDANHRSYQVVYVYPGSNV 903

Query: 722 PKWFRHQSMGSSAT--LKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGE---DDW 776
           P+W  +++  +     L + PP P      + F F  V+             GE    D 
Sbjct: 904 PEWLEYKTTNAYIIIDLSSGPPFP-----FLGFIFSFVI-------------GEYLHTDT 945

Query: 777 DGNVYAVCCDWKRKSEGH-----LYSWFLGKISYVESDHVFL----GCNSF 818
            G +         +SEG+     +Y  F G+   +ESDHV +     C+SF
Sbjct: 946 KGRLEVSITISDDESEGNQDSVRMYIDFEGR--KIESDHVCVVYDQRCSSF 994


>gi|357469153|ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505916|gb|AES87058.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1897

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 269/817 (32%), Positives = 409/817 (50%), Gaps = 107/817 (13%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
            MYDVFLSFRGED+R  F SHL+  L    I  F DD  I RGD IS SLL  I  S I I
Sbjct: 543  MYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDEIQRGDQISISLLRAIGHSRIFI 602

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            ++ S  YA+SRW                      FY VDPS VR++   FG+ F +L   
Sbjct: 603  VVLSTNYANSRWCMLELEKIMEIGRTGGLVVVPVFYEVDPSEVRRREGQFGKAFEKLIPT 662

Query: 99   FP--EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                E  K  WK AL +   ++GF     R ES  I+ I   V + LD T     +  VG
Sbjct: 663  ISVDESTKSNWKRALFDIGSIAGFVLIDSRNESADIKNIVKHVTRLLDRTELFVAEHPVG 722

Query: 156  VECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            VE  ++ +  LL I  SE V  L IWG+GG+ K TIA A++N+I R F+G  F LN+RE 
Sbjct: 723  VESRVDAVTKLLNIQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKFDGRSFLLNIREF 782

Query: 215  EETGGIK-DLQKKLLSELSKDG--NMRNIESQLN----RLARKKVRIVFDDVTS------ 261
             ET      LQ+++L ++ K     +R+IES  N    RLA+ +V +V DDV        
Sbjct: 783  CETDANHVSLQQQILCDVYKTTAFKIRDIESGKNILKERLAQNRVLLVLDDVNELDQLKA 842

Query: 262  ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR+IITTRD  +L++   +  Y ++E+  +++ +LF   AF        
Sbjct: 843  LCGSREWFGPGSRIIITTRDMHLLRSSRVDLVYTIEEMDESESLELFSWHAFKQPSPAEG 902

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
                +   I Y+  +PLAL+VLGCYL       W+  + KL+ IPH E+++ LK+S+D L
Sbjct: 903  FATHSTDVIAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIPHDEVQKKLKVSFDGL 962

Query: 372  DD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
             D +++ +FLDIACFL G  +++ I I +               +SL+ +D   ++RMHD
Sbjct: 963  KDVTEQQIFLDIACFLIGMDKNDAIKILNGCGFFADIGIKVLVERSLVTVDNRNKLRMHD 1022

Query: 418  LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
            LLRDMGR+I+ +ES   P  R+RLW  +++Y VL K  GTEA++G++L   + N+ + +N
Sbjct: 1023 LLRDMGRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKGLALVFPRKNK-VCLN 1081

Query: 478  SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL--KTLNICAEKLVSL 535
            + AF KM KLR L+  G +      +L G    E+R L W   PL           L+ +
Sbjct: 1082 TKAFKKMNKLRLLQLSGVQLNGDFKYLSG----ELRWLYWHGFPLTYTPAEFQQGSLIVI 1137

Query: 536  KMPCTKVEQLWDDVQRLPS--SLCTFKTP----ITFEIIDCKMLERLPDE--LENLEYLT 587
            ++  + ++Q+W + Q +P+   +   + P    +   ++  ++LE  P    L+NL+ L 
Sbjct: 1138 QLKYSNLKQIWKEGQDVPTCDGMGGVEGPPSPHVVGSLVASEVLEVPPASRMLKNLKILN 1197

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +  +  + E P+    +  +++L+L +  +L  +  SI  L KL  + ++ C RL+ LP 
Sbjct: 1198 LSHSLDLTETPD-FSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINLTDCIRLRKLPR 1256

Query: 647  LPCNLGLLSA---RNCTSLEKLPAGLSSMSSVL-----------------------YVNL 680
                L  L       C+ ++KL   L  M S+                        Y++L
Sbjct: 1257 SIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFSIVRSKNIGYISL 1316

Query: 681  CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
            C F     +    +++  WM  S  E   ++ S   P
Sbjct: 1317 CGFEGFSRDVFPSLIR-SWMSPSYNEISLVQTSASMP 1352



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 149/285 (52%), Gaps = 38/285 (13%)

Query: 187 KITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSK--DGNMRNIESQ 243
           K TIA A+++++  +FE      NVR   ++ GG   LQKKLL  ++K  +  + +IES 
Sbjct: 252 KSTIAQAIYDQVGPYFEHKSLLKNVRTFWQQNGGQVSLQKKLLMAVNKTTEKKILHIESG 311

Query: 244 L----NRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKK 283
                 RL  K V ++ DDV                  GS++II TRD+ +L     +  
Sbjct: 312 KVILKERLRHKSVLLILDDVNKLEQLKSLCGNRDWFGPGSKIIIITRDRHLLMEHGVDHI 371

Query: 284 YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
           Y++K+L  +++ +LF   AF          EL+ + + Y++G+PLALK LG +L G+   
Sbjct: 372 YKVKQLEESESIELFNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHGKDAL 431

Query: 344 VWESAMRKLE--IIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS 401
            W+  ++ LE    P  E+ + L+ S+D L D +K++FLDIACF  G  ++ V+   + S
Sbjct: 432 EWKRVLKSLERFSFPDQEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLRTINRS 491

Query: 402 -------------KSLINLDLFYRIRMHDLLRDMGREIVRKESIN 433
                        KSL+ +    ++ MH LL+ M R+I+++ES N
Sbjct: 492 TQCTSLQISLLEDKSLLTIGENNKLEMHGLLQAMARDIIKRESSN 536


>gi|356558199|ref|XP_003547395.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1062

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 285/924 (30%), Positives = 433/924 (46%), Gaps = 187/924 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D R  F SHL  +     I  F+DD+L  GD I  SL+  IE S I +II
Sbjct: 72  YDVFVSFRGKDVRGTFLSHLIEIFKRNKINAFVDDKLKPGDEIWSSLVEAIEQSFILLII 131

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY V+P+ VR Q  ++   F + +KR  
Sbjct: 132 FSQSYASSPWCLEELEAILECNKKYGRIVIPVFYHVEPADVRHQRGTYKNAFKKHQKRNK 191

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            K++ W++AL E+A++SG +++ IR E +L++EI   VL+RL  +    +K L+G++  I
Sbjct: 192 NKVQIWRHALKESANISGIETSKIRNEVELLQEIVRLVLERLGKS-PINSKILIGIDEKI 250

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
             +E L+    E  C + IWG+ G  K T+A  VF K+   ++G YF  N RE     GI
Sbjct: 251 AYVELLIRKEPEATCLIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLPNEREQSSRHGI 310

Query: 221 KDLQKKLLSELSKDG-NMRNIESQLN---RLARKKVRIVFDDVT---------------- 260
             L+K++ S L ++   + N    L+   R+ R KV IV DDV                 
Sbjct: 311 DSLKKEIFSGLLENVVTIDNPNVSLDIDRRIGRMKVLIVLDDVNDPDHLEKLLGTPDNFG 370

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
           SGSR+IITTR  QVL    AN+ Y++ E     A +LF   AF        + EL+ K +
Sbjct: 371 SGSRIIITTRYVQVLNANKANEIYQLGEFSLDKALELFNLIAFKQSDHQWEYNELSKKVV 430

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YA+G PL LKVL   LCG++KE WE  +  L+ +P  +  +V+K+SYD LD  ++ +FL
Sbjct: 431 DYAKGNPLVLKVLAQLLCGKNKEEWEGMLDTLKRMPPADAYKVMKLSYDELDRKEQQIFL 490

Query: 381 DIACF----------------LEGEHRDEVISIFDA---SKSLINLDLFYRIRMHDLLRD 421
           D+ACF                L+G    E ++        K+LI       I MHD L++
Sbjct: 491 DLACFFLRTHTTVNVSNLKSLLKGNESQETVTFRLGRLKDKALITYSDDNVIAMHDSLQE 550

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           M  EIVR+ES   PG R+RLW   DI++ LK    T+AI  I + +    ++  ++ + F
Sbjct: 551 MALEIVRRESSEDPGSRSRLWDPNDIFEALKNVKSTKAIRSILIHLPTFMKQ-ELDPHIF 609

Query: 482 SKMPKLRFLRFYG-------DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            KM +L+FL   G       D++  +   L+     E+R L W + PLK+L  +  AEKL
Sbjct: 610 GKMNRLQFLEISGKCEKDIFDEHNILAKWLQ-FSANELRFLCWYRYPLKSLPEDFSAEKL 668

Query: 533 VSLKMPCTKVEQLWDDVQRLPS--------------------------------SLCTFK 560
           V LK+P  +++ LW  V+ L +                                S+ T  
Sbjct: 669 VILKLPKGEIKYLWHGVKNLMNLKELHLTDSKMLEELPDLSNATNLEVLVLQGCSMLTRV 728

Query: 561 TPITF--------EIIDCKMLERLP-------------DELENLEYLTVKGTTIRELPES 599
            P  F         + DC  L  L              D+ E L  L++    I+EL   
Sbjct: 729 HPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNLDKCEKLRKLSLIAENIKEL--- 785

Query: 600 LGRLSWVK--------------RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             RL W K              +L+L   S ++++P  I+ L +L+ L +S+C  LQ +P
Sbjct: 786 --RLRWTKVKAFSFTFGHESKLQLLLLEGSVIKKLPSYIKDLMQLSHLNVSYCSNLQEIP 843

Query: 646 ELPCNLGLLSAR---NCTSLEKL--PAGLSSM-----SSVLYVNLCNFLKLDPNELSEIV 695
           +LP +L +L AR   +CTSL+ +  P+  +         VL+    N LKL+   L  I 
Sbjct: 844 KLPPSLKILDARYSQDCTSLKTVVFPSTATEQLKEYRKEVLF---WNCLKLNQQSLEAIA 900

Query: 696 KDGWMKHSLYEERGIKKSMY---------------------FPGNEIPKWFRHQSMGSSA 734
            +  +    +  R +  S +                     +PG+ + +W  +++  +  
Sbjct: 901 LNAQINVMKFANRRLSVSNHDDVENYNDYDKKYHFYQVVYVYPGSSVLEWLEYKTRNNYI 960

Query: 735 T--LKTRPPR-PAGYNKLISFAFC 755
              + + PP  P G      F FC
Sbjct: 961 IIDMSSAPPSLPVG------FIFC 978


>gi|357499227|ref|XP_003619902.1| Disease resistance protein [Medicago truncatula]
 gi|355494917|gb|AES76120.1| Disease resistance protein [Medicago truncatula]
          Length = 1660

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 289/908 (31%), Positives = 436/908 (48%), Gaps = 179/908 (19%)

Query: 4    VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
            VFL+FRG DTR+NFT +L+  L  K I TFID+  L RGD I+ SL+  IE S I I IF
Sbjct: 375  VFLNFRGSDTRNNFTGNLYKALVDKGINTFIDENDLQRGDEITSSLVKAIEESGIFIPIF 434

Query: 63   SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP- 100
            S  YASS +                      FY V+P+H+R QS S+G H ++ ++ F  
Sbjct: 435  SANYASSSFCLDELVHIIHCYNTKSCLVLPVFYDVEPTHIRHQSGSYGEHLTKHKEGFQN 494

Query: 101  -----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                 E++++WK ALT+AA+LSG+  +    E K IE+I   +  +++  F +  K  VG
Sbjct: 495  NEKNMERLRQWKMALTQAANLSGYHYSPHESECKFIEKIVEGISNKINHVFLNVAKYPVG 554

Query: 156  VECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            ++  IE+++ LL +GSE   ++  I+G GG+ K T+A AVFN I+  FEG  F  NVRE 
Sbjct: 555  LQSRIEQVKLLLDMGSENEVRMVGIFGTGGMGKSTLAKAVFNSIADQFEGVCFLHNVREN 614

Query: 215  EETGGIKDLQKKLLSELSK-DGNMRNIESQL----NRLARKKVRIVFDDVTS-------- 261
                 +K LQKKLLS++ K DG + ++   +     RL+RKK+ ++ DDV          
Sbjct: 615  STLKNLKHLQKKLLSKIVKFDGQIEDVSEGIPIIKERLSRKKILLILDDVDKLEQLDALA 674

Query: 262  --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    GSRVIITTRDK++L        + ++ L   +A +L  + AF  D + +S+ 
Sbjct: 675  GGLDWFGLGSRVIITTRDKRLLAYHVNTSTHAVEGLNETEALELLSRNAFKNDKVPSSYE 734

Query: 314  ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            ++ ++ + YA G+PLA+  +G  L GR  E WE  + + E IP  +I+ +L++SYD+L +
Sbjct: 735  DILNRVVTYASGLPLAIVTIGANLIGRKVEDWERILDEYENIPDKDIQRILQVSYDALKE 794

Query: 374  SQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLI-NLDLFYRIRMHDL 418
              ++VFLDIAC  +G    +V  I                A KSLI + +    + +HDL
Sbjct: 795  KDQSVFLDIACCFKGCKWTKVKKILHAHYGHPIEHHVGVLAEKSLIGHWEYDTHVTLHDL 854

Query: 419  LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
            + DMG+E+VR+ES   PG+R+RLW   DI  VL+ NTGT  IE I L      RE   + 
Sbjct: 855  IEDMGKEVVRQESPKKPGERSRLWFRDDIVNVLRDNTGTGNIEMIYLKYAFTARETEWDG 914

Query: 479  YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK----LVS 534
             A  KM  L+ L    D N    S   G   + +R+ +W   PLK+L+  + K    +  
Sbjct: 915  MACEKMTNLKTL-IIKDGN---FSRGPGYLPSSLRYWKWISSPLKSLSCISSKEFNYMKV 970

Query: 535  LKMPCTKVEQLWDDVQRLPS-SLCTFK--------------------------------T 561
            + +  ++      DV  LP+   C+F+                                 
Sbjct: 971  MTLDGSQYLTHIPDVSGLPNLEKCSFRGCDSLIKIHSSIGHLNKLEILDTFGCSELEHFP 1030

Query: 562  PIT------FEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILS 612
            P+       FEI DC  L+  P+   E+ N++ + +  T+I ELP S    S ++RL +S
Sbjct: 1031 PLQLPSLKKFEITDCVSLKNFPELLCEMTNIKDIEIYDTSIEELPYSFQNFSKLQRLTIS 1090

Query: 613  NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
               NL+      ++  K+  + IS+ E L              A N  S E LP  L   
Sbjct: 1091 -GGNLQGKLRFPKYNDKMNSIVISNVEHLNL------------AGNSLSDECLPILLKWF 1137

Query: 673  SSVLYVNL-CNF-LKLDPNELSEIVKDGWMKH-------SLYEERGIKKSM--------- 714
             +V +++L CN+   + P  L E  +   +KH       +L E RGI  ++         
Sbjct: 1138 VNVTFLDLSCNYNFTILPECLGECHR---LKHLNLKFCKALVEIRGIPPNLEMLFAVMCY 1194

Query: 715  -----------------------YFPG--NEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                                    FP   + IP WF HQS G + +       P+     
Sbjct: 1195 SLSSSSIRMLMSQKLHESGCTHILFPNTTDRIPDWFEHQSRGDTISFWFDKELPS----- 1249

Query: 750  ISFAFCAV 757
            ISF F  +
Sbjct: 1250 ISFTFILI 1257



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 68/129 (52%), Gaps = 23/129 (17%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRG DTR+NFT +L+  L  K I TFIDD  L RGD I+  L+  +E S I I IF
Sbjct: 9   VFLSFRGSDTRNNFTGNLYKALIDKGICTFIDDNDLERGDEITPKLVKAMEESRIFIPIF 68

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S  YASS +                      FY V+P+H+R  S S+G H ++   R  E
Sbjct: 69  SANYASSSFCLDELVHIIHCYKTKSCLVLPVFYDVEPTHIRHHSGSYGEHLTKHEGR-GE 127

Query: 102 KMKRWKNAL 110
            +K  K  L
Sbjct: 128 SLKYAKEML 136


>gi|147767848|emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 272/786 (34%), Positives = 408/786 (51%), Gaps = 132/786 (16%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGEDTR +FT HL+  L    + TF D ++L RG  I+  LL  IE S I+I
Sbjct: 14  IYDVFLSFRGEDTRCHFTDHLYSALIGNGVHTFRDHEELERGGAIAPGLLKAIEQSRISI 73

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++FSE YA SRW                      FY VDPSHVRKQ  S+G  F+     
Sbjct: 74  VVFSENYAQSRWCLDELVKIIECRTEREQLVLPVFYHVDPSHVRKQMGSYGEAFA----- 128

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           + EK           ADL   +  + + ES +IEEI N+++ RL+       + +VG+  
Sbjct: 129 YHEK----------DADLKRRE-KIQKSESVVIEEITNNIITRLNPKSLYVGENIVGMNI 177

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE-- 216
            +E+++SL+ I    V  + I GIGGI K TI  A++N+IS  F+G  F  NVRE  E  
Sbjct: 178 RLEKLKSLINIYLNKVRMVGICGIGGIGKTTITKALYNQISNQFQGVSFLANVREKSEYD 237

Query: 217 -------TGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS-------- 261
                     + D+ K+   E+S      N+    N L+ ++V +V DDV +        
Sbjct: 238 FGLLQLQQQLLNDILKRKNREISNVHEGMNVIK--NELSLRRVLVVLDDVDNLRQLVHLV 295

Query: 262 --------GSRVIITTRDKQVLKNCWANKKY-RMKELVYADAHKLFCQWAFGGDHLDASH 312
                   GSR++ITTRD+ +L     +K Y  ++EL   +A +LF  + F  +     +
Sbjct: 296 GKHDWFGQGSRILITTRDRHLLDAHGVDKPYHEIEELNSKEALQLFSLYTFKQNFPQEDY 355

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L+D  +KYA G+PLAL++LG +LC      WES + KLE  P  EI+ VLKIS+  LD
Sbjct: 356 KDLSDHIVKYATGLPLALQLLGSHLC-----EWESELCKLEREPVPEIQNVLKISFHGLD 410

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            +Q+ +FLDIACF +G+ +D V  I D               + L+ + L  +I MHDL+
Sbjct: 411 PTQREIFLDIACFFKGKDKDFVSRILDGCDFYAESGFRVLRDRCLMTI-LDNKIHMHDLI 469

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           + MG +IVR++    PGK +RLW   D+  VL +NTGTEAIEGI LDM+  ++++   + 
Sbjct: 470 QQMGWQIVREQYHKKPGKWSRLWEPNDVSHVLTRNTGTEAIEGIFLDMS-TSKQMQFTTE 528

Query: 480 AFSKMPKLRFLRFYGDK--------------NKCMVSHLE-----GVPFAEVRHLEWPQC 520
           AF  M KLR L+ + D               +K ++S +        P  E+R L W   
Sbjct: 529 AFKMMNKLRLLKVHQDAKYDSIVYSWMPVEPSKVLLSQVHFCRDFEFPSQELRCLHWDGY 588

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLW-----------------DDVQRLPSSLCTFKT 561
           PL++L  N CA+ LV L + C+ ++QLW                 + + ++P+ L     
Sbjct: 589 PLESLPSNFCAKNLVELNLRCSNIKQLWKTETLHKNLKVINLSYSEHLNKIPNPLGVPNL 648

Query: 562 PITFEIIDCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
            I      C  LE LP    +L  L+ L   G  ++   PE +G +  ++ L L +++ +
Sbjct: 649 EILTLEGWCVNLESLPRSIYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYL-DDTAI 707

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMSS 674
            ++P SI+HL  L +L +  C+ L+T+P+  CNL    LL   +C+ LEKLP  L S+  
Sbjct: 708 VKLPSSIKHLKGLEYLTLVKCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKC 767

Query: 675 VLYVNL 680
           +  ++L
Sbjct: 768 LETLSL 773



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 75/335 (22%)

Query: 472  REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE-VRHLEWPQCPLKTLNICAE 530
            RE++++  A  K+P               + HL+G+ +   V+  +    P    N+ + 
Sbjct: 698  RELYLDDTAIVKLPS-------------SIKHLKGLEYLTLVKCDDLKTVPQSICNLTSL 744

Query: 531  KLVSLKMPCTKVEQLWDDVQ---------------RLPS--SLCTFK------TPIT--- 564
            KL+     C+K+E+L +D++               +LPS   LC+ +      + +T   
Sbjct: 745  KLLDFS-SCSKLEKLPEDLKSLKCLETLSLHAVNCQLPSLSGLCSLRKLYLGRSNLTQGV 803

Query: 565  -----------------FEIIDCKMLERLPDELENLEYLTVKGTTIR--ELPESLGRLSW 605
                               +ID  +L R+   L +LE L +K   +   E+P  + +LS 
Sbjct: 804  IQSNNLLNSLKVLDLSRNNVIDKGILIRIC-HLSSLEELNLKNCNLMDGEIPSEVCQLSS 862

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            ++ L LS N +   IP SI  LSKL  L +SHC+ LQ +PELP  L LL A N       
Sbjct: 863  LEILDLSWN-HFNSIPASISQLSKLKALGLSHCKMLQQIPELPSTLRLLDAHNSH----- 916

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG-NEIPKW 724
                 ++SS       +F K    E S   +        Y   G+   +  PG + IP+W
Sbjct: 917  ----CALSSPSSFLSSSFSKFQDFECSSSSQVYLCDSPYYFGEGV--CIVIPGISGIPEW 970

Query: 725  FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
               Q+MG+  T+   P         + FA C+  V
Sbjct: 971  IMDQNMGNHVTIDL-PQDWYADKDFLGFALCSAYV 1004


>gi|357449991|ref|XP_003595272.1| Heat shock protein [Medicago truncatula]
 gi|355484320|gb|AES65523.1| Heat shock protein [Medicago truncatula]
          Length = 1805

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 272/751 (36%), Positives = 398/751 (52%), Gaps = 114/751 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+NFT  L+ +L    I TF D+Q I +G+ I+ SLL  I+ S I I+
Sbjct: 15  YDVFISFRGIDTRNNFTRDLYDILDQNGIHTFFDEQEIQKGEEITPSLLQAIQQSRIFIV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPS VR QS ++G    +  KRF
Sbjct: 75  VFSNNYASSTFCLNELVMILECSNTHGRLFLPVFYDVDPSQVRHQSGAYGDALKKHEKRF 134

Query: 100 PE-KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            + K+++W++AL +AA++SG+D  +  + E K I  I  +V K+++ T        V +E
Sbjct: 135 SDDKVQKWRDALCQAANVSGWDFQHGSQSEYKFIGNIVEEVTKKINRTTLHVADNPVALE 194

Query: 158 CSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             + E+ SLL  G E G   + I+GIGG+ K T+A AV+N IS  F+G  F   +RE+  
Sbjct: 195 YPMLEVASLLGSGPEKGTNMVGIYGIGGVGKSTLARAVYNHISDQFDGVCFLAGIRESAI 254

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS--------- 261
             G+  LQ+ LLSE+   +D  +R++   ++    RL RKKV +V DDV           
Sbjct: 255 NHGLAQLQETLLSEILGEEDIRIRDVYRGISIIKRRLQRKKVLLVLDDVDKVNQIQVLAG 314

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GS++++TTRDK +L        Y +K+L +  +  LF   AF    +D  + +
Sbjct: 315 GHDWFGPGSKIVVTTRDKHLLAIHEILNLYEVKQLNHEKSLDLFNWHAFRNRKMDPCYSD 374

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           ++++A+ YA G+PLAL+V+G +L G+S +VW+S++ K E + H EI E+LK+SYD LDD 
Sbjct: 375 ISNRAVSYASGLPLALEVIGSHLFGKSLDVWKSSLDKYERVLHKEIHEILKVSYDDLDDD 434

Query: 375 QKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLR 420
           QK +FLDIACF              L G   +  I +    KSLI +D    +RMHDL++
Sbjct: 435 QKGIFLDIACFFNSYEMSYAKEMLYLHGFSAENGIQVL-TDKSLIKVDGNGCVRMHDLVQ 493

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMGREIVR+ES   PG+R+RLW   DI  VL+ NTGT+ IE I +++   ++E+  +  A
Sbjct: 494 DMGREIVRQESTVEPGRRSRLWFDDDIVHVLETNTGTDTIEVIIMNLCN-DKEVQWSGKA 552

Query: 481 FSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           F+KM  L+ L     RF     K   S         +R L+W   P ++L  +   + L+
Sbjct: 553 FNKMKNLKILIIRSARFSRGPQKLPNS---------LRVLDWNGYPSQSLPADFNPKNLM 603

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT- 592
            L +P               S L +FK    F               E+L +L  KG   
Sbjct: 604 ILSLP--------------ESCLVSFKLLKVF---------------ESLSFLDFKGCKL 634

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPC 649
           + ELP SL  L  +  L L + +NL RI ESI  L+KL  L    C++L+ L     LP 
Sbjct: 635 LTELP-SLSGLVNLGALCLDDCTNLIRIHESIGFLNKLVLLSSQRCKQLELLVPNINLP- 692

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           +L  L  R C+ L+  P  L  M ++ YV L
Sbjct: 693 SLETLDIRGCSRLKSFPEVLGVMENIRYVYL 723


>gi|15239799|ref|NP_199725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10176947|dbj|BAB10096.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008392|gb|AED95775.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 980

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 274/911 (30%), Positives = 426/911 (46%), Gaps = 168/911 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED R NF SHL      K I TF DD + R   I   L   +  S I ++I
Sbjct: 15  YDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDLIERSQTIGLELKEAVRQSKIFVVI 74

Query: 62  FSERYASSRW-------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPE 101
           FS+ YASS W                    FY+V+PS VR Q+  FGR F      +  E
Sbjct: 75  FSKNYASSSWCLDELVEILKCKEERRLIPIFYKVNPSDVRNQTGKFGRGFRETCEGKNDE 134

Query: 102 KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
              +WK ALTEAA+++G DS   + E+  + +IA D+L +L+ T  +  + ++G+E  +E
Sbjct: 135 TQNKWKAALTEAANIAGEDSQSWKNEADFLTKIAKDILAKLNGTPSNDFENIIGIESHME 194

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR----EAEET 217
           ++  LLC+  + V  + IWG  GI K TIA  + ++ S  F  + F  NVR       ++
Sbjct: 195 KMVQLLCLNDDDVRMVGIWGPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNYQRIVDS 254

Query: 218 GGIKDLQKKLLSEL------SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
           GG  +LQ +L  E        KD  + ++     RL ++KV IV  DV            
Sbjct: 255 GGEYNLQARLQKEFLPIIFNQKDRKINHLWKIEERLKKQKVLIVLGDVDKVEQLEALANE 314

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT+DKQ+L     N  Y +K      A ++ C +AF  +      +++
Sbjct: 315 TRWFGPGSRIIVTTKDKQILVGHEINHIYEVKLPCRKTALEILCLYAFKQNVAPDDFMDV 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +  + +  +PL L+VLG ++ G+SK+ W+  + +L      ++E++LKISYD L    
Sbjct: 375 VVEVAELSGHLPLGLRVLGSHMRGKSKDRWKLELGRLTTSLDEKVEKILKISYDDLHIRD 434

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDM 422
           K +FL IAC   GE+ D V  +   S             KSLI ++    I MH LL  M
Sbjct: 435 KALFLHIACMFNGENIDLVKQMLVNSDLDVSLGLQLLLDKSLIQINDDREIVMHSLLLKM 494

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G+E+V + S + PGKR  L++ K+   +L  NTG+EA+ GISLD +++  ++ M+   F 
Sbjct: 495 GKEVVCQHS-SEPGKRQFLFNTKETCNILSNNTGSEAVLGISLDTSEIQNDVFMSERVFE 553

Query: 483 KMPKLRFLRFYG---DKNKCMVSHL-EGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSL 535
            M  L+FLRFY    D+N  +  HL  G+ +   VR L W   P+K +      E LV L
Sbjct: 554 DMRNLKFLRFYNKKIDENPSLKLHLPRGLNYLPAVRLLHWDSYPMKYIPSQFRPECLVEL 613

Query: 536 KMPCTKVEQLWDDVQ----------------------------------------RLPSS 555
           +M  +KV +LW+  Q                                         LPSS
Sbjct: 614 RMMHSKVVKLWEGTQTLAYLKTIDLSFSNNLVEVPDLSKAISLETLCLEGCQSLAELPSS 673

Query: 556 LCTFKTPITFEIIDCKMLERLP-----------------------DELENLEYLTVKGTT 592
           +          +  C+ LE +P                       D  +N+E + +K T 
Sbjct: 674 VLNLHRLKWLRLTMCEKLEVIPLHINLASLEVLDMEGCLKLKSFPDISKNIERIFMKNTG 733

Query: 593 IRELPESLGRLSWVKRLILS--------------------NNSNLERIPESIRHLSKLTF 632
           I E+P S+ + S ++ L +S                     +S +ER+P+ I+ L+ L +
Sbjct: 734 IEEIPPSISQWSRLESLDISGCLNLKIFSHVPKSVVYIYLTDSGIERLPDCIKDLTWLHY 793

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS-VLYVNLCNFLKLDPNEL 691
           L++ +C +L +LPELP ++ +LSA NC SLE++ +     ++ V +    NF      E 
Sbjct: 794 LYVDNCRKLVSLPELPSSIKILSAINCESLERISSSFDCPNAKVEFSKSMNF----DGEA 849

Query: 692 SEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLIS 751
             ++   W          + K    PG E+P  F H++ G S T+          +  + 
Sbjct: 850 RRVITQQW----------VYKRACLPGKEVPLEFSHRARGGSLTIHLEDENVCSSS--LR 897

Query: 752 FAFCAVVVFPA 762
           F  C +++FP+
Sbjct: 898 FKAC-ILLFPS 907


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
           thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
           thaliana]
          Length = 1294

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 263/781 (33%), Positives = 406/781 (51%), Gaps = 118/781 (15%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIII 61
           DVF+SFRGED R  F SHL        IK F DD  L RG +IS  L+  I+ S  AI++
Sbjct: 19  DVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAIVV 78

Query: 62  FSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM 103
            S  YA+S W                   FY VDPS VR+Q  SFG        +  EK+
Sbjct: 79  VSRNYAASSWCLDELLKIMECNKDTIVPIFYEVDPSDVRRQRGSFGEDVESHSDK--EKV 136

Query: 104 KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEI 163
            +WK AL + A +SG DS     +SKLI++I  D+  +L +T    +KGL+G+   ++ +
Sbjct: 137 GKWKEALKKLAAISGEDSRNW-DDSKLIKKIVKDISDKLVSTSWDDSKGLIGMSSHMDFL 195

Query: 164 ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDL 223
           +S++ I  + V  L IWG+GG+ K TIA  ++N++S  F+   F  NV+E     G++ L
Sbjct: 196 QSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVCNRYGVRRL 255

Query: 224 QKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT----------------S 261
           Q + L  +   +D    +  S  N    R   K V IV DDV                  
Sbjct: 256 QVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELVKETGWFGP 315

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-LDASHIELTDKAI 320
           GSR+I+TTRD+ +L +   N  Y++K L   +A +LFC +AF  +  L     EL+ +A+
Sbjct: 316 GSRIIVTTRDRHLLLSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSVQAV 375

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YA G+PLAL+VLG +L  RS+  WES + +L+  PH +I EVL++SYD LD+ +K +FL
Sbjct: 376 NYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVLRVSYDGLDEQEKAIFL 435

Query: 381 DIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
            I+CF   +  D V  + D               KSLI ++    +++HDLL  MGRE+V
Sbjct: 436 YISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLI-VESNGCVKIHDLLEQMGRELV 494

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R++++N+P +R  LW  +DI  +L +N+GT+ +EGISL++++++ E+  +  AF  +  L
Sbjct: 495 RQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEIS-EVFASDRAFEGLSNL 553

Query: 488 RFLRFY-----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           + L FY     G+    + + L  +P  ++R+L W   PLKT+      E LV L M  +
Sbjct: 554 KLLNFYDLSFDGETRVHLPNGLSYLP-RKLRYLRWDGYPLKTMPSRFFPEFLVELCMSNS 612

Query: 541 KVEQLWDDVQRLPS-----------------------------SLCTFKTPIT------- 564
            +E+LWD +Q L +                             S C     +T       
Sbjct: 613 NLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQSLVEVTPSIKNLK 672

Query: 565 ----FEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
               F + +C  L+ +P    L++LE + + G ++++  PE    +SW  R +  +++ +
Sbjct: 673 GLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPE----ISWNTRRLYLSSTKI 728

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSMSS 674
           E +P SI  LS L  L +S C+RL+TLP    +L  L + N   C  LE LP  L +++S
Sbjct: 729 EELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTS 788

Query: 675 V 675
           +
Sbjct: 789 L 789



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 139/324 (42%), Gaps = 41/324 (12%)

Query: 558  TFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL 617
            +F TP       C  L R  D    L  L++    + E+P S+G L  +  L LS N N 
Sbjct: 936  SFFTPEGLLHSLCPPLSRFDD----LRALSLSNMNMTEIPNSIGNLWNLLELDLSGN-NF 990

Query: 618  ERIPESIRHLSKLTFLFISHCERLQTLP-ELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
            E IP SI+ L++L  L +++C+RLQ LP ELP  L  +   +CTSL  + +G  +   + 
Sbjct: 991  EFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSI-SGCFNQYCLR 1049

Query: 677  YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
             +   N  KLD  + ++I+    +  +L  E    +  YFPG++IP  F HQ MG S  L
Sbjct: 1050 KLVASNCYKLD--QAAQIL----IHRNLKLESAKPEHSYFPGSDIPTCFNHQVMGPS--L 1101

Query: 737  KTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLY 796
              + P+    + ++ F+ C ++             G+   +       C  K      L 
Sbjct: 1102 NIQLPQSESSSDILGFSACIMIGV----------DGQYPMNNLKIHCSCILKDADACELV 1151

Query: 797  ----SWFLGKIS----YVESDHVFL---GCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLE 845
                 W+    +    Y  SDH+ L    C S   E +     EFS        F P   
Sbjct: 1152 VMDEVWYPDPKAFTNMYFGSDHLLLFSRTCTSM--EAYSEALFEFSVENTEGDSFSPL-- 1207

Query: 846  RGEVKKCGIHFVYAQDSADHILKD 869
             GEVKKC +H +  +D       D
Sbjct: 1208 -GEVKKCAVHLISLKDMMQEFSND 1230



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 40/163 (24%)

Query: 548 DVQRL---PSSLCTFKTPITFEIIDCKMLERLPDELENL--------------------- 583
           D QRL   PS L    +  +  +  C+ LE LPD L+NL                     
Sbjct: 748 DCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVS 807

Query: 584 ---EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
              E L +  T+I E+P  +  LS ++ L +S N  L  +P SI  L  L  L +S C  
Sbjct: 808 TSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSV 867

Query: 641 LQTLPELPCNLGLLSARNC--------TSLEKLPAGLSSMSSV 675
           L++ P     L +    +C        TS+++LP  + ++ ++
Sbjct: 868 LESFP-----LEICQTMSCLRWFDLDRTSIKELPENIGNLVAL 905


>gi|82542043|gb|ABB82029.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1147

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 257/734 (35%), Positives = 385/734 (52%), Gaps = 98/734 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR  FT HL+  L    I TF  DD+L RG+ I   LL  I+ S I+I+
Sbjct: 15  YDVFLSFRGKDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEIHDHLLRAIQESKISIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF + F +  +R
Sbjct: 75  VFSKGYASSRWCLNELVEILKCKNRKTGQIVQPIFYNIDPSDVRKQNGSFAKAFVKHEER 134

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA +LSG++ N +    E+K I+EI  DVL +LD  +    + LVG
Sbjct: 135 FEEKLVKEWRKALEEAGNLSGWNLNDMANGHEAKFIKEIIKDVLNKLDPKYLYVPEHLVG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++     I   L   ++ V  + I G+ GI K TIA  VFN++   FE S F  N+ E +
Sbjct: 195 IDRLAHNIIDFLSTATDDVLIVGIHGMPGIGKTTIARVVFNQLCYGFEESCFLSNINETS 254

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++ K    N+  ++        RL R++V +V DDV         
Sbjct: 255 KQFNGLVPLQKQLLHDIFKQDAANINCVDRGKVLIKERLCRQRVLVVADDVARQDQLNAL 314

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  VL    A++ Y+++EL   ++ +LF   A         +
Sbjct: 315 MGERSWFGPGSRVIITTRDSSVLLK--ADQTYQIEELKPDESLQLFSWHALRDTEPAEDY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+   + Y  G+PLAL+V+G  L G++++ W+S + KL  IP+ +I+  LKISYDSLD
Sbjct: 373 IELSKDVVDYCGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPNHDIQGKLKISYDSLD 432

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ V  +  A               +SLI ++   +I MHD
Sbjct: 433 GEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRGRSLIKVNAIGKITMHD 492

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGRE+VR+ S   PGKR R+W+ +D + VL++  GT+ +EG++LD+ K +    ++
Sbjct: 493 LLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDV-KASEAKSLS 551

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + +F+KM +L  L+  G        HL G   +   E+  + W QCPLK    +   + L
Sbjct: 552 TGSFAKMKRLNLLQING-------VHLTGSFKLLSRELMLICWLQCPLKYFPSDFTFDNL 604

Query: 533 VSLKMPCTKVEQLWD--------DVQRLPSSLCTFKTP-------ITFEIIDCKMLERLP 577
             L M  + +++LW          +  L  S    KTP          ++  C  L  + 
Sbjct: 605 DVLDMQYSNLKKLWKGKKILNRLKIINLSHSQNLIKTPNLHSSSLKKLKLKGCSSLVEVH 664

Query: 578 DELENLE---YLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
             + NL    +L ++G   ++ LPES+  +  +KRL +S  S LE++PE +  +  L  L
Sbjct: 665 QSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESLIEL 724

Query: 634 FISHCERLQTLPEL 647
                E  Q L  +
Sbjct: 725 LADGIENKQFLSSI 738



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
            S ++ L LS N     +P  I  L+KL  + +  C+ L ++ +LP NL  L A  C SL
Sbjct: 821 FSSLEELDLSGN-KFSSLPSGIGFLAKLEMMDVQECKYLVSIRDLPSNLVYLFAGGCKSL 879

Query: 663 EKLPAGLSSMSSVLYVNL 680
           E++   + S    LY+NL
Sbjct: 880 ERVRIPIESKKE-LYINL 896


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 272/803 (33%), Positives = 409/803 (50%), Gaps = 120/803 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  L   IE S   II
Sbjct: 20  YDVFLSFRGSDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLFRAIEESRFFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKR 98
           IFS+ YA SRW                      FY VDPS VR Q  SFG   +   R  
Sbjct: 80  IFSKNYAYSRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 139

Query: 99  FPEKM---KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
             EKM   ++W+ AL EAA+LSG   N  + E+++++EI + +++RL+    S  + +VG
Sbjct: 140 NQEKMEMIQKWRIALREAANLSGCHVND-QYETQVVKEIVDTIIRRLNHHPLSVGRNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++SL+      V  + I+GIGG+ K TIA A++N+ S  ++G  F  N+RE  
Sbjct: 199 IGVHLEKLKSLMNTKLNMVSVVGIYGIGGVGKTTIAKAIYNETSDQYDGRSFLRNIRERS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT--------- 260
           + G I  LQ++LL  + +  N +  N++  ++ + R     +V ++FDDV          
Sbjct: 259 K-GDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLTSNRVLVIFDDVDELKQLEYLA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IITTRDK VL    A+  Y + +L   +A +LF  WAF  +     + 
Sbjct: 318 EEKDWFHAKSTIIITTRDKHVLAQYGADIPYEVSKLNKEEATELFSLWAFKQNRPQEVYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKV+G  L G+    WESA+ KL+IIPH EI  VL+IS+D LDD
Sbjct: 378 NLSYNIIDYANGLPLALKVIGASLFGKKISHWESALCKLKIIPHKEIHNVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYR---------IRMHDLLRDMGR 424
             K +FLD+ACF +G+ +D V  I       +   L  R         + MHDL++ MG 
Sbjct: 438 IDKGMFLDVACFFKGDDKDFVSRILGPHAEHVITTLADRCLITISKNMLDMHDLIQLMGW 497

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           E++R+E    PG+R+RLW   + Y VL  NTGT AIEG+ LD  K N    + + +F +M
Sbjct: 498 EVIRQECPEDPGRRSRLW-DSNAYHVLIGNTGTRAIEGLFLDRCKFNLS-QLTTKSFKEM 555

Query: 485 PKLRFLRFYGDKNKCMV-SHL-EGVPFA--EVRHLEWPQCPLKT--LNICAEKLVSLKMP 538
            +LR L+ +  + K  +  HL     F+  E+ +L W + PL++  LN  A+ LV L + 
Sbjct: 556 NRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLR 615

Query: 539 CTKVEQLWD---------------------------------------------DVQRLP 553
            + ++QLW                                              +++RLP
Sbjct: 616 NSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCTMHGCVNLERLP 675

Query: 554 SSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
             +  +K   T     C  LER P+    +  L  L + GT I +LP S+  L+ ++ L+
Sbjct: 676 RGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLL 735

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCTS--LEKLPA 667
           L   + L +IP  I HLS L  L + HC  ++  +P   C+L  L   N        +P 
Sbjct: 736 LQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPT 795

Query: 668 GLSSMSSVLYVNL--CNFLKLDP 688
            ++ +S +  +NL  C+ L+  P
Sbjct: 796 TINQLSRLEVLNLSHCSNLEQIP 818



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 61/270 (22%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPS +C FK+  T     C  LE  PD   ++E+L  L + GT I+E+P S+ RL 
Sbjct: 1129 NLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLR 1188

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP------------------- 645
             ++   L+N  NL  +P+SI +L+ L  L +  C   + LP                   
Sbjct: 1189 GLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDS 1248

Query: 646  ---ELPCNLGLLSAR-----------------NCTSLEKL----------PAGLSSMSSV 675
               +LP   GL S R                 + +SLE+L          P G+S + ++
Sbjct: 1249 MNFQLPSLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNL 1308

Query: 676  LYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIK----KSMYFPGNEIPKWFRHQS 729
             +++L  C  L+  P EL   V+   ++  ++ + G K     +     N IP+W  HQ 
Sbjct: 1309 TFLDLSHCKMLQHIP-ELPSGVRRHKIQRVIFVQ-GCKYRNVTTFIAESNGIPEWISHQK 1366

Query: 730  MGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             G   T+K  P      +  +    C+++V
Sbjct: 1367 SGFKITMKL-PWSWYENDDFLGVVLCSLIV 1395


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 260/739 (35%), Positives = 392/739 (53%), Gaps = 82/739 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L  ++IKTF DD +L RG +I   LL  I+ S  AI+
Sbjct: 24  YDVFLSFRGEDTRKGFTDHLYDKLKWRAIKTFRDDPELQRGTSIHPELLMAIQQSRFAIV 83

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YA+S W                     FY VDPS VR Q  SF   F +  ++F 
Sbjct: 84  VISPNYAASTWCLVELTKILQSMDESETILPVFYDVDPSDVRHQKGSFAEAFFKHEEKFR 143

Query: 101 E---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           E   K++ W++ALT+ A+L+G+ S   R E++LI+EI   V  ++  T      ++ LVG
Sbjct: 144 EDIEKVQGWRDALTKVANLAGWTSKDYRYETELIKEIVEVVWNKVHPTLTLIDSSEMLVG 203

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  ++EI  LL I    VC + IWG+GGI K T+A  V+ K S +FE S F  NVRE  
Sbjct: 204 IEFRLKEICFLLDIAENHVCFIGIWGMGGIGKTTLARLVYEKFSHNFEVSIFLANVREIY 263

Query: 216 ETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS-------- 261
              G+  LQK+LLS++ K+ +++       I    + L  KK  ++ DDV          
Sbjct: 264 AKHGLVHLQKQLLSQILKEKDVQVWDVYSGITMAKSFLCNKKALLILDDVDQLNQLEKLV 323

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+I+TTRD+ +L      K+Y + EL   +A++LF   AF  D     ++
Sbjct: 324 GEKYWFGLGSRIIVTTRDRHLLVAHGIEKQYEVVELDEDEAYQLFNWKAFKEDEPQEKYL 383

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+ + +KYA+G+PLAL+ LG +L  R    W SA+ KL+  P+  + E+LKISYD LD+
Sbjct: 384 ELSKQFVKYARGLPLALRTLGSFLYKRDPYAWSSALNKLKQTPNRTVFEMLKISYDGLDE 443

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            +K +FLDIACF +   ++ VI + D+              KSL+ +     + MHDL++
Sbjct: 444 MEKRIFLDIACFHKWSDKERVIEVLDSCGFCARIVIDVLVEKSLLTIS-GKSVCMHDLIQ 502

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +M  EIVR ES   PG R+RLW   DI+ VL KNTG +AIEGI L + +   E H N  A
Sbjct: 503 EMAWEIVRGESFEEPGARSRLWLRDDIFHVLTKNTGKKAIEGIVLRLREF-EEAHWNPEA 561

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           FSKM  L+ L     +      +L       +R L+W   P K L       +L  L +P
Sbjct: 562 FSKMCNLKLLDIDNLRLSVGPKYLPNA----LRFLKWSWYPSKFLPPGFQPNELTELSLP 617

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            +K++ LW+ ++        F+   + ++   + L R PD   L+NLE L ++G T + E
Sbjct: 618 HSKIDYLWNGIK-------YFRKLKSIDLSYSQNLTRTPDFTGLQNLERLVLEGCTNLVE 670

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+  L  ++ L   N  +++ +P  ++ +  L    +S C +++ +PE    +  +S
Sbjct: 671 IHPSIASLKCLRILNFRNCKSIKILPNEVK-METLEVFDLSGCSKVKKIPEFGGQMKNVS 729

Query: 656 A--RNCTSLEKLPAGLSSM 672
                 T++E+LP     +
Sbjct: 730 KLYLGGTAVEELPLSFKGL 748



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL-L 654
           LPE +G LS +K L L  N N   +P SI  LSKL+F  +++C+RLQ LP+LP N  + L
Sbjct: 836 LPEDIGCLSSLKELNLGGN-NFVSLPTSIGCLSKLSFFNLNNCKRLQQLPDLPLNNRIYL 894

Query: 655 SARNCTSLEKLPA 667
              NCTSL+ LP 
Sbjct: 895 KTDNCTSLQMLPG 907


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  358 bits (919), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 277/763 (36%), Positives = 395/763 (51%), Gaps = 124/763 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L  K ++TF DD+ L RG  I+  LL  IE S I+++
Sbjct: 17  YDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRISVV 76

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           +FS+ YA S W                      FY VDP+HVRKQ+ SF   F+   +  
Sbjct: 77  VFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFASHGEDT 136

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E+ KRW+ ALT+AA+LSG+       ESKLI++I  ++L +L       +K LVGV 
Sbjct: 137 EVIERAKRWRAALTQAANLSGWHLQN-GYESKLIKKIIEEILSKLSRKLLYVDKHLVGVS 195

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++EI   + I S  V  + I GIGG+ K TIA  V+N IS  FEG  F  N+RE  + 
Sbjct: 196 SRLKEILLRVSIESNDVRMVGICGIGGVGKTTIAKVVYNLISSQFEGISFLANIREVSKN 255

Query: 218 GGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS---------- 261
            G+  LQK+LL ++    + R       I   ++RL  KKV I+ DDV            
Sbjct: 256 CGLLPLQKQLLGDILMGWSQRISNLBEGINVLMDRLHSKKVLIILDDVDDLNQLESLAGN 315

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR++ITTRDK +L     ++ Y  KEL   +A +LF Q+AF        ++ L
Sbjct: 316 VDWFGIGSRIVITTRDKHLLNVHGVSEIYEAKELEPEEALQLFSQYAFKRKSPXKDYMNL 375

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +D  + YA+G+PLALKVLG +L  ++   WES + KL+   + ++++VL+IS+D LD +Q
Sbjct: 376 SDNVVHYAKGLPLALKVLGSFLFSKTILEWESELHKLKKELNTKVQDVLRISFDGLDFTQ 435

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           K +FLD+ACF +G+  D VI I D             + + LI+L L  R+ MHDL++ M
Sbjct: 436 KEIFLDLACFFKGQEYDFVIKILDGCGFHAKSGIRVLSDRCLIDL-LDNRLWMHDLIQQM 494

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR+E    PGK +RLW ++ IY VLKKNT  + +  I L  ++    IH+ +  FS
Sbjct: 495 GWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTVLDNLNTIELSNSQ--HLIHLPN--FS 550

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRH----LEWPQCP-------------LKTL 525
            MP L  L   G       S LE  P  EV +    L    C              LK L
Sbjct: 551 SMPNLERLVLEG-----CTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPRSIKLECLKYL 605

Query: 526 NICA--------------EKLVSLKMPCTKVEQL--------------WDDVQR---LPS 554
           ++                + L  L +  T + +L               ++ +R   LPS
Sbjct: 606 SLSGCSDLKNFPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPS 665

Query: 555 SLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKRLIL 611
           S+C  K+  T  +  C  LE  P+ +EN+E+L    + GT +++L  S+  L+ +  L L
Sbjct: 666 SICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNL 725

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            +  NL  +P SI +L  L  L +S C +LQ LPE   NLG L
Sbjct: 726 RDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPE---NLGSL 765



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 46/229 (20%)

Query: 551  RLPS--SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
            +LPS   LC+ +     +I DC ++E                     +P  +  LS ++ 
Sbjct: 827  QLPSLSGLCSLRE---LDISDCNLMEG-------------------AVPFDICNLSSLET 864

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--P 666
            L LS N N   +P  I  LSKL FL ++HC+ L  +PELP ++  ++A+ C+SL  +  P
Sbjct: 865  LNLSRN-NFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTP 923

Query: 667  AGLSSMSSV---LYVNLCNFLKLDP-----NELS------EIVKDGWMK-HSLYEERGIK 711
            + + +   V   L   L N   LD      N+++      +IV +   K  +   + G  
Sbjct: 924  SSVCNNQPVCRWLVFTLPNCFNLDAENPCSNDMAIISPRMQIVTNMLQKLQNFLPDFGF- 982

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF 760
             S++ PG+EIP W  +Q++GS  T++  PP     N  + FA C V  F
Sbjct: 983  -SIFLPGSEIPDWISNQNLGSEVTIEL-PPHWFESN-FLGFAVCCVFAF 1028


>gi|225460149|ref|XP_002276056.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1131

 Score =  358 bits (919), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 264/758 (34%), Positives = 399/758 (52%), Gaps = 94/758 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VF+SFRGEDTR NFT HL+  L    I TF DD+ L +G +I+  LL  IE S I II
Sbjct: 19  YEVFISFRGEDTRKNFTDHLYTTLVAYGIHTFRDDEELEKGGDIASDLLRAIEESKIFII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YA+SRW                      FY V+PS VRKQS S+G  F    K  
Sbjct: 79  IFSTNYANSRWCLNELVKIFECTTQKQSTILPIFYHVNPSDVRKQSGSYGDAFVDHEKDA 138

Query: 100 PEK----MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            EK    +++W+ AL + A L G   +  + E+ +++EI +D+++RL+    +  K +VG
Sbjct: 139 DEKKMEVIQKWRTALNQVASLCGLHVDE-QYETLVVKEITDDIIRRLNRKPLNVGKNIVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +E+++SL+ I    V  + I+GIGGI K TIA A++N IS  F+GS F  NVRE  
Sbjct: 198 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAIYNDISYQFDGSSFLNNVRERS 257

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARK-------------KVRIVFDDVT 260
           +   ++ LQ++LL  +   K   + N++  +  + R                 +  +++ 
Sbjct: 258 KDNALQ-LQQELLHGILKGKSPKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLA 316

Query: 261 SG-------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTR K  L      + Y +  L  A+A +LF  WAF  +  +  + 
Sbjct: 317 EEHSWFGPRSRIIITTRHKHFLTQYGVKESYEVPILHDAEAIELFSWWAFKQNLPNEIYK 376

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+ + + YA+G+PLAL+VLG +L  ++   WESA+ KL+ IPH+ I+ VLKISYD LDD
Sbjct: 377 NLSYQVVDYAKGLPLALEVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGLDD 436

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA------------SKSLINLDLFYRIRMHDLLRD 421
            +K +FLDIACF +G+ +D V  + D              K LI++    ++ MHDLL+ 
Sbjct: 437 VEKGIFLDIACFFKGKDKDFVSRMLDEDFYAESGIGVLHDKCLISIS-GNKLDMHDLLQQ 495

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG EIVR+E    PG+R+RLW  +DI+ VLK+N G+E IEGI LD++ +   +   + AF
Sbjct: 496 MGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTEAF 555

Query: 482 SKMPKLRFLRFYGDKN---------------KCMVSHLEGVPFA--EVRHLEWPQCPLKT 524
           + M KLR L+ Y  K+                C V       F   ++R+L W    LK+
Sbjct: 556 AGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSLKS 615

Query: 525 L--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
           L  +   + LV L MP + +++LW  ++ L       K+  + ++   K L   PD   +
Sbjct: 616 LPKDFSPKHLVDLSMPYSHIKKLWKGIKVL-------KSLKSMDLSHSKCLIETPDFSGI 668

Query: 581 ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L ++G   + E+  SLG L  +  L L +   L R+P  I +   L  L +S C 
Sbjct: 669 TNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCS 728

Query: 640 RLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSV 675
           + +  PE   NL +L     + T +  LP    SM ++
Sbjct: 729 KFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNL 766



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 114/291 (39%), Gaps = 52/291 (17%)

Query: 599  SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR- 657
            SLG LS ++ L LS N N   +P ++  LS L FL + +C+RLQ LP+ P +L  L  R 
Sbjct: 822  SLGFLSSLEDLNLSGN-NFVTLP-NMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRG 879

Query: 658  ---------------------NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
                                 NC  LE LP   SS+ S+   N  +   L   E  ++++
Sbjct: 880  NNFVTLPNMSGLSHLKTLVLGNCKRLEALPQLPSSIRSL---NATDCTSLGTTESLKLLR 936

Query: 697  DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
              W   SL  +     +   PG+ IP W R+QS  S   ++   P     N L    F  
Sbjct: 937  P-WELESLDSDV----AFVIPGSRIPDWIRYQS--SENVIEADLPLNWSTNCL---GFAL 986

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCN 816
             +VF +          E   D      CC  + +   HL       +   E DHV L   
Sbjct: 987  ALVFSSQPPVSHWLWAEVFLDFG--TCCCSIETQCFFHLEG--DNCVLAHEVDHVLLN-- 1040

Query: 817  SFGGEYFGPNYDEFSFR--IHCSFHFPPYLERG-EVKKCGIHFVYAQDSAD 864
                  + P     S    IH    F    E G E+K+CG+  VY  +  +
Sbjct: 1041 ------YVPVQPSLSPHQVIHIKATFAITSETGYEIKRCGLGLVYVNEEVN 1085


>gi|357490889|ref|XP_003615732.1| Resistance protein [Medicago truncatula]
 gi|355517067|gb|AES98690.1| Resistance protein [Medicago truncatula]
          Length = 1177

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 255/769 (33%), Positives = 396/769 (51%), Gaps = 101/769 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRG+D+R++  SHL+  LS   I TF+DD+ L +G  +   LL  I+ S I +
Sbjct: 6   IYDVFINFRGDDSRNSLVSHLYAALSNARINTFLDDEKLHKGSELQPQLLRAIQGSQICL 65

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++FSE Y+ S W                      FY +DP+ VR+Q  +FG+      K+
Sbjct: 66  VVFSENYSRSSWCLLELEKIMENRGTHGQIVIPIFYHIDPAIVRRQLGNFGKALEITAKK 125

Query: 99  FPEK-------MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK 151
              K       ++ WK+AL++A +LSG+D    R ES+L+++I  +VL +LD TF    +
Sbjct: 126 MQSKREKQKLLLQTWKSALSQATNLSGWDVTSSRNESELVQKIVEEVLAKLDNTFMPLPE 185

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
             VG+E  +E++   +   S  VC + IWG+GG+ K T A A++N+I R F    F  N+
Sbjct: 186 HTVGLESRVEKMVPWIENNSTKVCMIGIWGMGGLGKTTAAKAIYNQIHRKFVYRSFIENI 245

Query: 212 REA---EETGG--IKDLQKKLLSELSKDGNMRNIESQL----NRLARKKVRIVFDDVT-- 260
           RE    +  GG  I   Q+ L   L     + NI S        L+ KKV IV DDVT  
Sbjct: 246 RETCERDSKGGWHICLQQQLLSDLLKTKEKIHNIASGTIAIKKMLSAKKVLIVLDDVTKV 305

Query: 261 --------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                         +GS +I+T+RD  +LK+   +  Y + E+   ++ +LF   AF   
Sbjct: 306 EQVKALYESRKWFGAGSVLIVTSRDAHILKSLQVDHVYPVNEMDQKESLELFSWHAFRQA 365

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
              A   EL+   IKY  G+PLA +V+G YL GR++E W S + KLEIIP   ++E L+I
Sbjct: 366 SPRADFSELSSSVIKYCGGLPLAAEVIGSYLYGRTREEWTSVLSKLEIIPDHHVQEKLRI 425

Query: 367 SYDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYR 412
           SYD L D  QK++FLDI CF  G+ R  V  I +               +SL+ ++   +
Sbjct: 426 SYDGLSDGKQKDIFLDICCFFIGKDRAYVTEILNGCGLFASIGISVLIERSLLKVEKNNK 485

Query: 413 IRMHDLLRDMGREIVRKE--------SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGIS 464
           + MHDL+RDMGREIVR+         S   PG+R+RLW  KD++ VL  NTGT+ +EG+ 
Sbjct: 486 LGMHDLIRDMGREIVRQNSEKDVRQISEKDPGERSRLWFQKDVHDVLTNNTGTKTVEGLV 545

Query: 465 LDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCM-VSHLEGVPFAEVRHLEWPQCPLK 523
           L++   +R    N+ AF +M KLR L+       C+ ++   G    ++R + W Q    
Sbjct: 546 LNLETTSRA-SFNTSAFQEMKKLRLLQL-----DCVDLTGDFGFLSKQLRWVNWRQSTFN 599

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--E 579
            +  N     LV  ++  + V+Q+W +   L       K  I   +   K L+  P+   
Sbjct: 600 HVPNNFYQGNLVVFELKYSMVKQVWKETPFLD------KLKI-LNLSHSKYLKNTPNFSL 652

Query: 580 LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           L +LE L +K   ++ E+  S+G L+ +  +   + ++L  +P  I  L  +T L +  C
Sbjct: 653 LPSLEKLIMKDCPSLSEVHPSIGDLNNLLLINFKDCTSLGNLPREISQLMSVTTLILDGC 712

Query: 639 ERLQTLPELPCNL----GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
             +  L E    +     L++AR  T +EK P  + S  S++Y++LC F
Sbjct: 713 SNITELEEDVVQMKSLKTLMAAR--TGIEKAPFSIVSSKSIVYISLCGF 759


>gi|357449965|ref|XP_003595259.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
 gi|355484307|gb|AES65510.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
          Length = 1061

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 278/809 (34%), Positives = 429/809 (53%), Gaps = 122/809 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR+ FT  L++ L  K I TFID++ I +G+ I+ SLL  I+ S I I+
Sbjct: 55  YDVFLSFRGIDTRNTFTGSLYNSLDQKGIHTFIDEKEIQKGEEITPSLLQAIQQSRIYIV 114

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPS VR Q  ++G    +  +RF
Sbjct: 115 VFSSNYASSTFCLNELVMILECSNTRRRLLLPVFYDVDPSQVRHQRGAYGEALRKHEERF 174

Query: 100 PE---KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   K+++W++AL +AA++SG+   +  +PE K I  I   V K+++ T     +  V 
Sbjct: 175 SDDKDKVQKWRDALCQAANISGWHFQHGSQPEYKFIGNIVEVVAKKINRTPLHVVENPVA 234

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFN-KISRHFEGSYFALNVRE 213
           +E  + E+ SLL  GS E    + I+G GG+ K T+A AV+N +IS  F+G  F  ++R 
Sbjct: 235 LESPVLEVASLLGFGSDERANIVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLADIRR 294

Query: 214 AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT------- 260
           +    G+  LQ+ LLS++   +D  +R++   ++    RL RKKV +V DDV        
Sbjct: 295 SAINHGLVQLQETLLSDILGEEDIRVRDVYRGISIIKRRLQRKKVLLVLDDVDKAKQIQV 354

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGS++IITTRDK +L        Y +KEL +  + +LF   AF    +D S
Sbjct: 355 LAGGHDWFGSGSKIIITTRDKHLLAINGILSVYEVKELNHEKSLELFSWHAFINRKIDPS 414

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +  ++++A+ YA G+P+AL+V+G +L G+S +VW+S++ K E + H +I EVLK+SYD L
Sbjct: 415 YRSISNRAVSYAHGLPIALEVIGSHLIGQSLDVWKSSLDKYEKVLHKDIHEVLKVSYDDL 474

Query: 372 DDSQKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIRMHD 417
           D+  K +FLDIACF              L G   +  I +    KSLI +D+   +RMHD
Sbjct: 475 DEDDKGIFLDIACFYNSYEMSYAKEMLYLHGFSAENGIQVL-TDKSLIKIDVNGCVRMHD 533

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++DMGREIVR+ES   PG+R+RLW   DI  VL++NTGT+ IE I +++   ++E+H +
Sbjct: 534 LVQDMGREIVRQESSVEPGRRSRLWFDDDIIHVLEENTGTDTIEVIIINLCN-DKEVHWS 592

Query: 478 SYAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
             AF KM  L+ L     RF  D  K   S         +R L+W   P ++L  +   +
Sbjct: 593 GKAFKKMKNLKILIIRSARFSKDPQKLPNS---------LRVLDWSGYPSQSLPGDFNPK 643

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID------CKMLERLP--DELEN 582
           KL+ L +                SSL +FK+   FE +       CK+L  LP    L N
Sbjct: 644 KLMILSLH--------------ESSLVSFKSLKVFESLSFLDFEGCKLLTELPSLSGLVN 689

Query: 583 LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           L  L +   T +  +  S+G L+ +  L     + L+ +  +I +L  L  L +  C RL
Sbjct: 690 LGALCLDDCTNLITIHRSVGFLNKLMLLSTQRCNQLKLLVPNI-NLPSLESLDMRGCSRL 748

Query: 642 QTLPELPCNLGLL-SARNC----TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
           ++ PE+   LG++ + R+     TS++KLP  + ++  +  L++  C  L   P+ +  +
Sbjct: 749 KSFPEV---LGVMENIRDVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRIL 805

Query: 695 VKDGWM------KHSLYEERGIKKSMYFP 717
            K G +         L+E+R    S  FP
Sbjct: 806 PKLGIIMVYDCRGFQLFEDREKVGSEVFP 834


>gi|297741023|emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 264/758 (34%), Positives = 399/758 (52%), Gaps = 94/758 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VF+SFRGEDTR NFT HL+  L    I TF DD+ L +G +I+  LL  IE S I II
Sbjct: 19  YEVFISFRGEDTRKNFTDHLYTTLVAYGIHTFRDDEELEKGGDIASDLLRAIEESKIFII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YA+SRW                      FY V+PS VRKQS S+G  F    K  
Sbjct: 79  IFSTNYANSRWCLNELVKIFECTTQKQSTILPIFYHVNPSDVRKQSGSYGDAFVDHEKDA 138

Query: 100 PEK----MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            EK    +++W+ AL + A L G   +  + E+ +++EI +D+++RL+    +  K +VG
Sbjct: 139 DEKKMEVIQKWRTALNQVASLCGLHVDE-QYETLVVKEITDDIIRRLNRKPLNVGKNIVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +E+++SL+ I    V  + I+GIGGI K TIA A++N IS  F+GS F  NVRE  
Sbjct: 198 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAIYNDISYQFDGSSFLNNVRERS 257

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARK-------------KVRIVFDDVT 260
           +   ++ LQ++LL  +   K   + N++  +  + R                 +  +++ 
Sbjct: 258 KDNALQ-LQQELLHGILKGKSPKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLA 316

Query: 261 SG-------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTR K  L      + Y +  L  A+A +LF  WAF  +  +  + 
Sbjct: 317 EEHSWFGPRSRIIITTRHKHFLTQYGVKESYEVPILHDAEAIELFSWWAFKQNLPNEIYK 376

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+ + + YA+G+PLAL+VLG +L  ++   WESA+ KL+ IPH+ I+ VLKISYD LDD
Sbjct: 377 NLSYQVVDYAKGLPLALEVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGLDD 436

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA------------SKSLINLDLFYRIRMHDLLRD 421
            +K +FLDIACF +G+ +D V  + D              K LI++    ++ MHDLL+ 
Sbjct: 437 VEKGIFLDIACFFKGKDKDFVSRMLDEDFYAESGIGVLHDKCLISIS-GNKLDMHDLLQQ 495

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG EIVR+E    PG+R+RLW  +DI+ VLK+N G+E IEGI LD++ +   +   + AF
Sbjct: 496 MGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTEAF 555

Query: 482 SKMPKLRFLRFYGDKN---------------KCMVSHLEGVPFA--EVRHLEWPQCPLKT 524
           + M KLR L+ Y  K+                C V       F   ++R+L W    LK+
Sbjct: 556 AGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSLKS 615

Query: 525 L--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
           L  +   + LV L MP + +++LW  ++ L       K+  + ++   K L   PD   +
Sbjct: 616 LPKDFSPKHLVDLSMPYSHIKKLWKGIKVL-------KSLKSMDLSHSKCLIETPDFSGI 668

Query: 581 ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L ++G   + E+  SLG L  +  L L +   L R+P  I +   L  L +S C 
Sbjct: 669 TNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCS 728

Query: 640 RLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSV 675
           + +  PE   NL +L     + T +  LP    SM ++
Sbjct: 729 KFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNL 766



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 25/94 (26%)

Query: 569 DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
           +CK L+ LP    +LE L ++G     LP   G LS +K L+L N               
Sbjct: 858 NCKRLQALPQFPSSLEDLILRGNNFVTLPNMSG-LSHLKTLVLGN--------------- 901

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
                    C+RL+ LP+LP ++  L+A +CTSL
Sbjct: 902 ---------CKRLEALPQLPSSIRSLNATDCTSL 926



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 81/215 (37%), Gaps = 74/215 (34%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPES------ 599
           ++RLPS +  FK+  T  +  C   E  P+   NLE L      GT +R LP S      
Sbjct: 706 LRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRN 765

Query: 600 LGRLS------------WVKRLILSNNSNLERIPES------------------------ 623
           L +LS            W KR   S+NS    +P S                        
Sbjct: 766 LKKLSFRGCGPASASWLWSKR---SSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGS 822

Query: 624 ----------------------IRHLSKLTFLFISHCERLQTLPELPCNLG--LLSARNC 659
                                 +  LS L FL + +C+RLQ LP+ P +L   +L   N 
Sbjct: 823 LGFLSSLEDLNLSGNNFVTLPNMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRGNNF 882

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            +L  + +GLS + +++  N C  L+  P   S I
Sbjct: 883 VTLPNM-SGLSHLKTLVLGN-CKRLEALPQLPSSI 915


>gi|356532658|ref|XP_003534888.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1072

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 272/802 (33%), Positives = 399/802 (49%), Gaps = 146/802 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D RD F SHL      K I  F+D  L +GD I  SL+G I  S I ++I
Sbjct: 11  YDVFVSFRGQDIRDGFLSHLIDTFERKKINFFVDYNLEKGDEIWPSLVGAIRGSLILLVI 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YASS W                      FY + P+HVR Q  S+   F+   ++  
Sbjct: 71  FSPDYASSCWCLEELVKILECREEYGRIVIPVFYHIQPTHVRHQLGSYAEAFAVHGRKQM 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            K++ W++AL ++ADL+G DS+    ++ ++ EI + VLKRL       +KGLVG+E  I
Sbjct: 131 MKVQHWRHALNKSADLAGIDSSKFPNDAAVLNEIVDLVLKRL-VKPHVISKGLVGIEEKI 189

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
             +ES +    +    + IWG+GGI K T+A  +FNK+   +EG YF  N RE  +  GI
Sbjct: 190 TTVESWIRKEPKDNLLIGIWGMGGIGKTTLAEEIFNKLQYEYEGCYFLANEREESKNHGI 249

Query: 221 KDLQKKLLSEL-----------SKDGNMRNIESQLNRLARKKVRIVFDDVT--------- 260
             L+K++ S L           +++    NI   L R+   KV IV DDV+         
Sbjct: 250 ISLKKRIFSGLLRLRYDDVEIYTENSLPDNI---LRRIGHMKVLIVLDDVSDSDHLGKLL 306

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGSR+++TTRD+QVLK     K Y + EL +    +LF   AF        + 
Sbjct: 307 GTLDNFGSGSRILVTTRDEQVLKAKKVKKTYHLTELSFDKTLELFNLNAFNQSDRQKEYY 366

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+ + + YA+G+PL +KVL   L G++KE WES + KL+ IP  ++ EV+K+SYD LD 
Sbjct: 367 ELSLRVVNYAKGIPLVVKVLAGLLHGKNKEEWESLLDKLKKIPPTKVYEVMKLSYDGLDR 426

Query: 374 SQKNVFLDIACF----------------LEGEHRDEVISIFDA-----SKSLINLDLFYR 412
            ++ +FLD+ACF                L+    D   S+F A      K+LI +     
Sbjct: 427 KEQQIFLDLACFFLRSNIMVNTCELKSLLKDTESDN--SVFYALERLKDKALITISEDNY 484

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + MHD L++M  EI+R+ES +  G  +RLW   DI + LK    TE I  + +DM  + +
Sbjct: 485 VSMHDSLQEMAWEIIRRES-SIAGSHSRLWDSDDIAEALKNGKNTEDIRSLQIDMRNLKK 543

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NI 527
           +  ++   F+ M KL+FL+  G  N  +++ L EG+ F   E+R L W   PLK+L  N 
Sbjct: 544 Q-KLSHDIFTNMSKLQFLKISGKYNDDLLNILAEGLQFLETELRFLYWDYYPLKSLPENF 602

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPS--------------------------------S 555
            A +LV L+ P  ++++LWD VQ L +                                S
Sbjct: 603 IARRLVILEFPFGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSGATNLEELKLGGCS 662

Query: 556 LCTFKTPITFE--------IIDCKMLERLPDE-------------LENLEYLTVKGTTIR 594
           + T   P  F         +I+CK L  +  +              ENL   ++    ++
Sbjct: 663 MLTSVHPSIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCENLREFSLISDNMK 722

Query: 595 E----------LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           E          LP S G  S +K L L   S +E++P SI +L++L  L I +C  LQT+
Sbjct: 723 ELRLGWTNVRALPSSFGYQSKLKSLDL-RRSKIEKLPSSINNLTQLLHLDIRYCRELQTI 781

Query: 645 PELPCNLGLLSARNCTSLEKLP 666
           PELP  L +L A  CTSL+ LP
Sbjct: 782 PELPMFLEILDAECCTSLQTLP 803



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 172/457 (37%), Gaps = 106/457 (23%)

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGR 424
           K+S+D   +  K  FL I+    G++ D++++I       +  +L +    +  L+ +  
Sbjct: 545 KLSHDIFTNMSKLQFLKIS----GKYNDDLLNILAEGLQFLETELRFLYWDYYPLKSLPE 600

Query: 425 EIVRKESI--NHP-GKRNRLWHHKDIYQVLKKN--------------TGTEAIEGISLDM 467
             + +  +    P G+  +LW        LKK               +G   +E + L  
Sbjct: 601 NFIARRLVILEFPFGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSGATNLEELKLGG 660

Query: 468 NKVNREIHMNSYAFSKMPKLRFLR------FYGDKNKCMVSHLEGVPFAEVRHLEWPQCP 521
             +   +H + ++  K+ KL  +          D   C +SHL  +    +R        
Sbjct: 661 CSMLTSVHPSIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCENLREFSLISDN 720

Query: 522 LKTL-----NICA--------EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEII 568
           +K L     N+ A         KL SL +  +K+E       +LPSS+      +  +I 
Sbjct: 721 MKELRLGWTNVRALPSSFGYQSKLKSLDLRRSKIE-------KLPSSINNLTQLLHLDIR 773

Query: 569 DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
            C+ L+ +P+    LE L  +  T                       +L+ +PE  R L 
Sbjct: 774 YCRELQTIPELPMFLEILDAECCT-----------------------SLQTLPELPRFLK 810

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN-----LCNF 683
            L    I  C+ L TLP LP  L  L A  C SL+ +    S+    L  N       N 
Sbjct: 811 TLN---IRECKSLLTLPVLPLFLKTLDASECISLKTVLLSPSTAVEQLKENSKRILFWNC 867

Query: 684 LKLDPNELSEIVKDGW---MK----------------HSLYEER-GIKKSMY-FPGNEIP 722
           L L+   L+ I ++     MK                +S Y++  G  +++Y +P + +P
Sbjct: 868 LNLNIYSLAAIGQNAQTNVMKFAGQHLSTPNHHHVENYSDYKDNYGSYQAVYAYPASNVP 927

Query: 723 KWFRHQSMGSSAT--LKTRPPRPAGYNKLISFAFCAV 757
            W  +++        L + PP P     L+ F F  V
Sbjct: 928 PWLEYKTRNDYIIIDLSSAPPSP-----LLGFIFGFV 959


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 287/856 (33%), Positives = 419/856 (48%), Gaps = 175/856 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR +FT HLH  L  K I TF+DDQL RG+ IS +LL  IE S  +III
Sbjct: 22  YDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQISPALLNAIEESRFSIII 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY ++PSHV+KQ+ SF   F++  + + 
Sbjct: 82  FSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNLNPSHVKKQTGSFAEAFAKHEQEYR 141

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           EKM++   W+ ALTE A +SG+DS   R ESKLIEEI  D+  +L  T  S  KGLVG+E
Sbjct: 142 EKMEKVVKWREALTEVATISGWDSRD-RHESKLIEEIVRDIWNKLVGTSPSYMKGLVGME 200

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA--LNVREAE 215
             +E ++SLL + SE              +   +    NK S     S+    L +    
Sbjct: 201 SRLEAMDSLLSMFSEP------------DRNPTSARKGNKESNDSYKSHPQQRLKIGLWA 248

Query: 216 ETGGIKDLQKKLLSELSKDGNMRN--IESQLNRLARKKVRIVFDDVTS------------ 261
           +  G K    K+  E   +  + N  I    + L  +KV I+ DDV              
Sbjct: 249 QNLGSKLSPHKVEWERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNN 308

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRD+ +L     +  Y +KEL   +A KLFC +AF   H      +L  
Sbjct: 309 WFGLGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCG 368

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
            A+ Y  G+PLALKVLG  L  +    WES + KL+  P+ E++ VLK S++ LDD+++N
Sbjct: 369 HALDYTSGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGLDDNEQN 428

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIA F +G  +D V  I D+              KSLI +    ++ MHDLL++MG 
Sbjct: 429 IFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISE-NKLCMHDLLQEMGW 487

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR++S   PG+R+RL  H+DI  VL  NTGTEA+EGI LD+++ ++E++ +  AF+KM
Sbjct: 488 EIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSE-SKELNFSIDAFTKM 545

Query: 485 PKLRFLRFYG---DKNKCMVSHLEGVPFA---------------------------EVRH 514
            +LR L+      D++   +S  E + +                             +R 
Sbjct: 546 KRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRD 605

Query: 515 LEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD------------------------- 547
           L W   PLK+   N   EKLV L M  ++++QLW+                         
Sbjct: 606 LYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDF 665

Query: 548 ----DVQRLPSSLCT-----------FKTPITFEIIDCKML------------------- 573
               +++RL    CT            K  I   +  CK L                   
Sbjct: 666 SGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSG 725

Query: 574 ----ERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
               ++ P+    +E+L  L+++GT I+ LP S+  L+ +  L L    +LE +P SI  
Sbjct: 726 CSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFK 785

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
           L  L  L +S+C RL+ LPE+  N+  L     + + + +LP+ +  ++ ++++NL N  
Sbjct: 786 LKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCK 845

Query: 685 KLD--PNELSEIVKDG 698
           KL   P    E+   G
Sbjct: 846 KLASLPQSFCELTSLG 861



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 43/290 (14%)

Query: 575  RLPD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
            RLP    L +L  L ++   + E  LP  LG +  ++RL LS NS +  IP S+  LS+L
Sbjct: 938  RLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFIT-IPASLSGLSRL 996

Query: 631  TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV----LYVNLCNFLKL 686
              L + +C+ LQ+LPELP ++  L+A +CTSLE       + +S     L  N  N  +L
Sbjct: 997  RSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFSCSSGAYTSKKFGDLRFNFTNCFRL 1056

Query: 687  DPNELSEIVKDGWMKHSLYEERGIKK--------------SMYFPGNEIPKWFRHQSMGS 732
              N+ S+IV  G +   +     I K              +   PG+ IP+WFRHQS+G 
Sbjct: 1057 GENQGSDIV--GAILEGIQLMSSIPKFLVPWGIPTPHNEYNALVPGSRIPEWFRHQSVGC 1114

Query: 733  SATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCC---DWK 788
            S  ++     P  YN KL+  AFCA + F   +       G    + + + + C   D  
Sbjct: 1115 SVNIEL---PPHWYNTKLMGLAFCAALNFKGAM------DGYPGTEPSSFGLVCYLNDCF 1165

Query: 789  RKSEGH-LYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCS 837
             ++  H LY+   G   ++ESDH      S   E +     + SFR H +
Sbjct: 1166 VETGLHSLYTPLEGS-KFIESDHTLFEYISLARERW---RMQLSFRHHVA 1211



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 17/212 (8%)

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLV 533
           IHM S     +     L+ + +    +  ++E +P   +        PL   N+    L+
Sbjct: 713 IHMESLQILTLSGCSKLKKFPE----VQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALL 768

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKG 590
           +LK  C  +E L       P S+   K+  T  + +C  L++LP+  EN+E L    + G
Sbjct: 769 NLK-ECKSLESL-------PRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDG 820

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           + I ELP S+G L+ +  L L N   L  +P+S   L+ L  L +  C  L+ LP+   +
Sbjct: 821 SGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGS 880

Query: 651 LGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           L  L+  N   + ++++P  ++ ++++  ++L
Sbjct: 881 LQCLAELNADGSGIQEVPPSITLLTNLQKLSL 912


>gi|357487985|ref|XP_003614280.1| TMV resistance protein N [Medicago truncatula]
 gi|355515615|gb|AES97238.1| TMV resistance protein N [Medicago truncatula]
          Length = 1024

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 242/751 (32%), Positives = 397/751 (52%), Gaps = 80/751 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF+SFRGEDTR+   SHLH  L    + TF+DDQ L +G+ +  +L   IE S I+I
Sbjct: 11  IYDVFISFRGEDTRNTIVSHLHAALQNSGVNTFLDDQKLKKGEELEPALRMAIEQSKISI 70

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRK 97
           ++ S  YA S W                      FYRV+P+ VR Q+  FG+       K
Sbjct: 71  VVLSPNYAGSSWCLDELVHIMDCRESYGRTVVPVFYRVNPTQVRHQTGDFGKALELTATK 130

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           +  +++ +WK ALTE +++SG+  N+ R E +L++ I   +L +L+ +  S  +  +G+E
Sbjct: 131 KEDQQLSKWKRALTEVSNISGWRYNISRNEGELVKGIVEYILTKLNISLLSITEYPIGLE 190

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREA-- 214
             +++I  ++   S  VC + IWG+GG  K T A A++N+I R F+G + F  ++RE   
Sbjct: 191 SRVQQITKIIDDQSWKVCIIGIWGMGGSGKTTTAKALYNQIHRRFQGRTSFVESIREVCD 250

Query: 215 EETGGIKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVT--------- 260
             + G   LQK+LL +L +      G        + RL  +KV +V DDVT         
Sbjct: 251 NNSRGAITLQKQLLLDLFEIKQKIHGVALGKNKIMTRLQGQKVLVVLDDVTKSEQLKALC 310

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGS +IITTRD ++LK+   +  Y M E+    + +LF   AF   +      
Sbjct: 311 ENPKLLGSGSVLIITTRDLRLLKSFKVDHVYTMTEMDKHQSLELFSCHAFQQPNPRDKFS 370

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+   + Y +G+PLAL+VLG YL  R+++ W  A+ KLE IP+ +++++L+ISYD L+D
Sbjct: 371 ELSRNVVAYCKGLPLALEVLGRYLSERTEQEWRCALSKLEKIPNNDVQQILRISYDGLED 430

Query: 374 -SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            +QK++FLDI CF  G++R +V  I +               +SL+ ++    + MHDLL
Sbjct: 431 YTQKDIFLDICCFFIGKNRADVTEILNGCGLHAYSGISILIERSLVKVEKNNTLGMHDLL 490

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           RDMGR I  + SI  P K +RLW H D+  VL K  GTE +EG+  ++ + +R     + 
Sbjct: 491 RDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPRTHR-TRFGTN 549

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKM 537
           AF +M KLR L+  G     ++    G+   ++R ++W +   K +   ++   LV  ++
Sbjct: 550 AFQEMKKLRLLKLDGVD---LIGDY-GLISKQLRWVDWQRPTFKCIPDDSDLGNLVVFEL 605

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIR 594
             + + Q+W +    P  L   K      +   K L+  PD  +L NLE L +K   ++ 
Sbjct: 606 KHSNIGQVWQE----PKLLGKLK---ILNVSHNKYLKITPDFSKLPNLEKLIMKDCPSLI 658

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           E+ +S+G L  +  + L +  +L  +P  I  L  +  L +S C +++ L E    +  L
Sbjct: 659 EVHQSIGDLKNIVLINLRDCKSLANLPREIYKLISVKTLILSGCSKIEKLEEDIMQMESL 718

Query: 655 SA--RNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           +A     T ++++P  ++   S+ Y++LC +
Sbjct: 719 TALIAANTGIKQVPYSIARSKSIAYISLCGY 749


>gi|359477827|ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 270/805 (33%), Positives = 409/805 (50%), Gaps = 122/805 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S   II
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           IFS+ YA SRW                      FY VDPS VR Q  SFG     H    
Sbjct: 80  IFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   E +++W+ AL +AA+LSG   N  + E+++++EI + +++RL+    S  K +VG
Sbjct: 140 NQEKKEMIQKWRIALRKAANLSGCHVND-QYETEVVKEIVDTIIRRLNHQPLSVGKNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++SL+      V  + I+GIGG+ K TIA A++N+IS  ++GS F +N++E  
Sbjct: 199 IGVHLEKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKERS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT--------- 260
           + G I  LQ++LL  + +  N +  N++  ++ + R     +V ++FDDV          
Sbjct: 259 K-GDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDK VL    A+ +Y + +L   +A +LF  WAF  +     + 
Sbjct: 318 EEKDWFRAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKVLG  L G+    WESA+ KL+I+PH+EI  VL+IS+D LDD
Sbjct: 378 NLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--ASKSLINLDLFYRIR-------MHDLLRDMGR 424
             K +FLD+ACF +G+ RD V  I    A  ++  LD    I        MHDL++ MG 
Sbjct: 438 IDKGIFLDVACFFKGDDRDFVSRILGPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGW 497

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EI+R+E    PG+R+RL    + Y VL  N GT AIEG+ LD  K N    + + +F +M
Sbjct: 498 EIIRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCKFNPS-ELTTESFKEM 555

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFA----EVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
            +LR L+ +  + K  +       F     E+ +L W   PL++L  N  A+ LV L + 
Sbjct: 556 NRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLR 615

Query: 539 CTKVEQLWD-----------------------------------------------DVQR 551
            + ++Q+W                                                +++ 
Sbjct: 616 DSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTLEGCTTVLKRCVNLEL 675

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           LP  +  +K   T     C  LER P+   ++  L  L + GT I +LP S+  L+ ++ 
Sbjct: 676 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQT 735

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCTS--LEKL 665
           L+L     L +IP  I HLS L  L + HC  ++  +P   C+L  L   N        +
Sbjct: 736 LLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSI 795

Query: 666 PAGLSSMSSVLYVNL--CNFLKLDP 688
           P  ++ +S +  +NL  CN L+  P
Sbjct: 796 PTTINQLSRLEVLNLSHCNNLEQIP 820



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 19/233 (8%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+  T     C  LE  P+   ++E+L  L + GT I+E+P S+ RL 
Sbjct: 1128 NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLR 1187

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L+L N  NL  +PESI +L+    L +S C     LP+   NLG L      SLE 
Sbjct: 1188 GLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD---NLGRLQ-----SLEY 1239

Query: 665  LPAG-LSSMSSVL--YVNLCNF--LKLDPNELSEIVKDGWMKHSLYEE-RGIKKSMYFPG 718
            L  G L SM+  L     LC+   LKL    L E   + +   SL  E R    +     
Sbjct: 1240 LFVGHLDSMNFQLPSLSGLCSLRTLKLQGCNLREFPSEIYYLSSLGREFRKTLITFIAES 1299

Query: 719  NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKS 771
            N IP+W  HQ  G   T+K  P      +  + F  C++ V P  ++  +H++
Sbjct: 1300 NGIPEWISHQKSGFKITMKL-PWSWYENDDFLGFVLCSLCV-PLEIETKKHRT 1350


>gi|357513781|ref|XP_003627179.1| NBS resistance protein [Medicago truncatula]
 gi|355521201|gb|AET01655.1| NBS resistance protein [Medicago truncatula]
          Length = 1236

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 262/792 (33%), Positives = 397/792 (50%), Gaps = 136/792 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+DTR  FTSHL+  L    I T+ID ++ +GD +   L+  I+ S I +++
Sbjct: 27  YDVFISFRGDDTRAGFTSHLYADLCRSKIYTYIDYRIEKGDEVWVELVKAIKQSTIFLVV 86

Query: 62  FSERYASSRW------------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           FSE YASS W                         FY VDPSHVRKQ+ S+G    + +K
Sbjct: 87  FSENYASSTWCLNELVEIMECCNKNEDDKVVVIPVFYHVDPSHVRKQTGSYGTALIKHKK 146

Query: 98  RFP---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           +     + M+ WKNAL +AA+LSGF S   R ES++IE I   VL +L+  + +      
Sbjct: 147 QGKNDDKMMQNWKNALFQAANLSGFHSTTYRTESEMIEAITRAVLGKLNQQYTNDLPCNF 206

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            ++ +   I+SL+      V  + +WG+GG  K T+A A+F ++S  +EGS F   V E 
Sbjct: 207 ILDENYWSIQSLIKSDLTEVQIIGLWGMGGTGKTTLAAAMFQRVSFKYEGSCFLEKVTEV 266

Query: 215 EETGGIKDLQKKLLSELSKDG----NMRNIESQ-LNRLARKKVRIVFDDV---------- 259
            +  GI     KLLS+L ++       + I S  + RL R K  IV DDV          
Sbjct: 267 SKRHGINYTCNKLLSKLLREDLDIDTSKLIPSMIMRRLKRMKSFIVIDDVHNSELLQNLI 326

Query: 260 -------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGS VI+TTRDK VL +    K Y +K++   ++ +LF   AFG       +
Sbjct: 327 GVGHGWLGSGSTVIVTTRDKHVLISGGIEKIYEVKKMNSQNSLQLFSLNAFGKVSPKDGY 386

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL+ +A+ YA+G PLALKVLG  L  +S+  W+ A+ KL+ IP+ EI+ + ++SY+ LD
Sbjct: 387 VELSKRAVDYAKGNPLALKVLGSLLRCKSEIEWDCALAKLKEIPNTEIDFIFRLSYNELD 446

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D +K++FLDIACF +G  R+ +  I +               K+LI++D    I+MHDL+
Sbjct: 447 DKEKDIFLDIACFFKGHERNRITKILNECGFFADIGISNLLDKALISVDFENCIQMHDLI 506

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN------------------------- 454
           ++ G++IVR+ES+ +PG+R+RL   K++  VLK N                         
Sbjct: 507 QETGKQIVREESLKNPGQRSRLCDPKEVCNVLKNNRVRDALTCLPIHMIFIYKMQLPTEI 566

Query: 455 --------TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEG 506
                    G+E +E I LD  +    I++   +F KM  LR L F  +K    ++   G
Sbjct: 567 LTLRFTFLQGSENVESIFLDATEFTH-INLRPESFEKMVNLRLLAFQDNKGIKSINLPHG 625

Query: 507 VPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTP 562
           +      +R+ +W   PL++L    C E LV L +  + VE+LW+ V  LP         
Sbjct: 626 LDLLPENLRYFQWDGYPLQSLPSTFCPEMLVELSLKGSHVEKLWNGVLDLP--------- 676

Query: 563 ITFEIIDCKMLERLPDELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIP 621
                              NLE L + G+  + E P   G  + +K +IL    ++  + 
Sbjct: 677 -------------------NLEILDLGGSKKLIECPNVSGSPN-LKHVILRYCESMPEVD 716

Query: 622 ESIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKLPAGLSSMSSVLYVN 679
            SI  L KL  L +  C  L++L    C+  L  L AR+C +L++     SS+     ++
Sbjct: 717 SSIFLLQKLEVLNVFECTSLKSLSSNTCSPALRKLEARDCINLKEFSVTFSSVDG---LD 773

Query: 680 LCNFLKLDPNEL 691
           LC   + D NEL
Sbjct: 774 LC-LSEWDRNEL 784



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 21/136 (15%)

Query: 616  NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM--- 672
            ++  +PE+I++L +L  + +  C+ +Q++P L   + +L   NC SLEK+   LSS    
Sbjct: 877  DIRSLPETIKYLPRLERVDVYDCKMIQSIPALSQFIPVLVVSNCESLEKV---LSSTIEP 933

Query: 673  ---SSVLYVNLCNFLKLDPNELSEIVKDGWMK----HSLYEERGIKKSMYF----PGNEI 721
                +  ++ L N   L+P+    ++KD   +     SLY++  I    YF    PG E 
Sbjct: 934  YEEPNPCFIYLLNCKNLEPHSYQTVLKDAMDRIETGPSLYDDDEI--IWYFLPAMPGME- 990

Query: 722  PKWFRHQSMGSSATLK 737
              WF + S     TL+
Sbjct: 991  -NWFHYSSTQVCVTLE 1005


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 387/744 (52%), Gaps = 83/744 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S   ASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNSASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT---FQSKNKGLV 154
              +K++ W++ALT+ A L+G+ S   R E +LI EI   +  ++  +   F S  K LV
Sbjct: 139 VGNKKVEGWRDALTKVASLAGWTSKDYRYEKELIREIVQALWSKVHPSLTVFGSSEK-LV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+   +EEI+ LL I +  V  + IWG+GG+ K T+A  V+ KIS  FE   F  NVRE 
Sbjct: 198 GMHTKLEEIDVLLDIEASDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVREV 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
             T G+  LQK++LS + K+ N +  N+ S +  + R    K V +V DDV         
Sbjct: 258 SATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHL 317

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+I TTR+++VL      K Y +K L  A+A +LF   AF     +  +
Sbjct: 318 AGEKDWFGLRSRIIFTTRNQRVLVTHGVEKPYELKGLNNAEALQLFSWKAFRKCEPEEDY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL    + +A G+PLALK LG +L  RS + W SA+ KL   P   + ++LK+SYD LD
Sbjct: 378 AELCKSFVMHAGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDKTVFDMLKVSYDGLD 437

Query: 373 DSQKNVFLDIACF---LEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF    + +   E++  +D            +SL+ +     I MHDL+
Sbjct: 438 EMEKKIFLDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLVTISSNNEIGMHDLI 497

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           R+MG EIVR++S   PG  +RLW   DI+ V  KNTGTEAIEGI L ++K+      N  
Sbjct: 498 REMGCEIVRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKLEGA-DWNPE 556

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           AFSKM  L+ L  +   N  +    + +P A +R L+W   PLK+L      ++L  L  
Sbjct: 557 AFSKMCNLKLLYIH---NLRLSLGPKSLPDA-LRILKWSWYPLKSLPPGFQPDELTELSF 612

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIR 594
             + ++ LW+ ++ L  +L +     +  +I      R PD   + NLE L ++G T + 
Sbjct: 613 VHSNIDHLWNGIKYL-GNLKSIVLSYSINLI------RTPDFTGIPNLEKLVLEGCTNLV 665

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++  S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE       L
Sbjct: 666 KIHPSIALLKRLKIWNFRNCKSIKTLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRL 724

Query: 655 S--ARNCTSLEKLPAGLSSMSSVL 676
           S      T++EKLP+ +  +S  L
Sbjct: 725 SKLCLGGTAVEKLPSSIEHLSESL 748



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 135/315 (42%), Gaps = 54/315 (17%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
            E+P  +G LS ++ L L  N N   +P SI  L +L  + + +C+RLQ LPELP +  L 
Sbjct: 814  EIPNDIGSLSSLECLELGGN-NFVSLPASIHLLCRLGSINVENCKRLQQLPELPVSGSLR 872

Query: 654  LSARNCTSLE---KLPAGLSSMS--SVLYVNLCN---------FLKLDPNELSEIVKDGW 699
            ++  NCTSL+   +LP  L  +S  S+  VN  +         FL    N L E+    +
Sbjct: 873  VTTVNCTSLQVFPELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVTYVTY 932

Query: 700  MKHSLYEERGIKK----------------------SMYFPGNEIPKWFRHQSMGSSATLK 737
            ++                                 +   PG+EIP+WF +QS G S T K
Sbjct: 933  VRSLSLSLSLSLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEK 992

Query: 738  TRPPRPAGYNKLISFAFCAVVV---FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH 794
               P  A  +K I FA CA++V    P+ +        + D D +   + C+W       
Sbjct: 993  L--PWDACNSKWIGFAVCALIVPQDNPSAVPE------DPDLDPDTCLISCNWSNYGING 1044

Query: 795  LYSWFLGKISYVESDHVFLGCNSFGGEYFGP-NYDEFSFRIHCSFHFPPYLERGEVKKCG 853
            +    L  +   +SDH++L        +  P N  E +F    +          +VKKCG
Sbjct: 1045 VVGRGLC-VRQFDSDHLWLLV--LPSPFRKPKNCREVNFVFQTARAVGNN-RCMKVKKCG 1100

Query: 854  IHFVYAQDSADHILK 868
            +  +Y QD+ + I K
Sbjct: 1101 VRALYEQDTEELISK 1115


>gi|357513283|ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
 gi|355520952|gb|AET01406.1| TMV resistance protein N [Medicago truncatula]
          Length = 1091

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 250/778 (32%), Positives = 407/778 (52%), Gaps = 88/778 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           ++DVF++FRGED R  F SHL+ VLS   I TF+D++ L +G++I   LL  I  S I+I
Sbjct: 15  LHDVFINFRGEDVRRTFVSHLYAVLSNAGINTFLDNEKLEKGEDIGHELLQAISVSRISI 74

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FS+ Y  S W                      FY VDPS VR Q   FG+      K 
Sbjct: 75  IVFSKNYTESSWCLNELEKIMECRRLHGHVVLPVFYDVDPSVVRHQKGDFGKALEVAAKS 134

Query: 99  -------FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK 151
                    +++ +W+  LTEA++LSG+D +  R + +L+++I   +L +LD T  S  +
Sbjct: 135 RYIIEEVMVKELGKWRKVLTEASNLSGWDGSAFRSDRELVKKIVEAILPKLDNTTLSITE 194

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
             VG+E  ++++  ++   S  VC + IWG+GG  K T+A A++N+I R F+ + F  N+
Sbjct: 195 FPVGLESHVKQVVGVIEKHSGDVCMVGIWGMGGSGKTTVAKAIYNEIHRRFDCTSFIENI 254

Query: 212 REA--EETGGIKDLQKKLLSELSKDG-NMRNIESQLNRLAR----KKVRIVFDDVT---- 260
           RE   ++T G   LQ++LLS++ K    + +I S    + R    KK  ++ DDVT    
Sbjct: 255 REVCEKDTKGHIHLQQQLLSDVLKTKEKIHSIASGTATIQRELTGKKALVILDDVTDFQQ 314

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GS +I+TTRD  +LK    +  Y+M+E+   ++ +LF   AF     
Sbjct: 315 IKALCGNHKFFGAGSVLIVTTRDVHILKLLNVDSVYKMEEMQKNESLELFSWHAFRKASP 374

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
                EL+     Y  G+PLAL+VLG YL  R+K+ W S + KLE IP+ ++ E L+ISY
Sbjct: 375 RGGFSELSRNVAAYCGGLPLALEVLGSYLFERTKQEWISVLSKLERIPNDQVHEKLRISY 434

Query: 369 DSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           D L DD  K++FLDI CF  G+ R  V  I +               +SL+ ++   ++ 
Sbjct: 435 DGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKLG 494

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDL+RDMGREIVR+ S   PGKR+RLW H+D++ VL KNTGTE +E +  ++ +  R  
Sbjct: 495 MHDLIRDMGREIVRESSAREPGKRSRLWFHEDVHDVLAKNTGTETVEALIFNLQRTGRG- 553

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
             ++  F  M KLR L+     ++  ++   G    ++R + W +     +  +   E L
Sbjct: 554 SFSTNTFQDMKKLRLLQL----DRVDLTGDFGYLSKQLRWVNWQRSTFNFVPNDFDQENL 609

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V+ ++  + V+Q+W + + L       K  I   +   K L+R PD  +L NLE L +K 
Sbjct: 610 VAFELKYSNVKQVWKETKLL------HKLKI-LNLSHSKHLKRTPDFSKLPNLEKLIMKD 662

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ ++  S+G L  +  + L + ++L  +P  I  L  +  L +S C ++  L E   
Sbjct: 663 CQSLSDIHPSIGDLKNLLLINLKDCASLVNLPREIYRLRSVKTLILSGCSKIVKLEEDIV 722

Query: 650 ---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
              +L  L A N   ++++P  +    ++ +++LC +  L  +    I+   WM  ++
Sbjct: 723 QMKSLTTLIAENA-GVKQVPFSIVRSKNITHISLCGYQGLSRDVFPSIIW-SWMSPTM 778


>gi|356570335|ref|XP_003553345.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1082

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 265/755 (35%), Positives = 378/755 (50%), Gaps = 109/755 (14%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIII 61
           DVFLSFRGEDTR +FT +L+  LS + I TFIDD+ L RGD IS +L   IE S I II+
Sbjct: 17  DVFLSFRGEDTRHSFTGNLYKALSDRGIHTFIDDKKLPRGDQISSALEKAIEESRIFIIV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS +                      FY+VDPS VR  + SFG   +   K+F 
Sbjct: 77  LSENYASSSFCLNELGYILKFIKGKGLLVLPVFYKVDPSDVRNHAGSFGESLAHHEKKFN 136

Query: 101 E----------KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSK 149
                      K++ WK AL + A+LSG+   +    E K I+ I   V K+++      
Sbjct: 137 ADKETFKCNLVKLETWKMALHQVANLSGYHFKHGEEYEYKFIQRIVELVSKKINRVPLHV 196

Query: 150 NKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
               VG+E  ++E+++LL +GS+ V   L I G+GG+ K T+A AV+N I+ HFE   F 
Sbjct: 197 ADYPVGLESRMQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFL 256

Query: 209 LNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVTS--- 261
            NVRE  +  GI+ LQ  LLSE   +  +  ++  ++    RL ++K+ ++ DDV     
Sbjct: 257 ENVRETSKKHGIQHLQSNLLSETVGEHKLIGVKQGISIIQHRLQQQKILLILDDVDKREQ 316

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSRVIITTRDKQ+L      + Y + EL    A +L    AF  + +
Sbjct: 317 LQALAGRPDLFGLGSRVIITTRDKQLLACHGVERTYEVNELNEEHALELLSWKAFKLEKV 376

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D  + ++ ++A  YA G+PLAL+V+G  L GR+ E W SA+ + + IP+ EI+E+LK+SY
Sbjct: 377 DPFYKDVLNRAATYASGLPLALEVIGSNLYGRNIEQWISALDRYKRIPNKEIQEILKVSY 436

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIR 414
           D+L++ +++VFLDIAC  +     EV  I  A               KSLI +     + 
Sbjct: 437 DALEEDEQSVFLDIACCFKKYGLVEVEDILHAHHGHCMKHHIGVLVEKSLIKISCDGNVT 496

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR-E 473
           +HDL+ DMG+EIVR+ES+  PGKR+RLW  KDI QVL++N GT  IE I +D       +
Sbjct: 497 LHDLIEDMGKEIVRQESVKEPGKRSRLWFPKDIVQVLEENKGTSQIEIICMDFPIFQEIQ 556

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           I  + YAF KM KL+ L            HL       +R LEW + P +    +   +K
Sbjct: 557 IEWDGYAFKKMKKLKTLNIRNGHFSKGPKHLPNT----LRVLEWKRYPTQNFPYDFYPKK 612

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYL 586
           L   K+P +        V    +S     T + F+   C+ L  +PD      LENL + 
Sbjct: 613 LAICKLPYSGFTSHELAVLLKKASKFVNLTSLNFDY--CQYLTHIPDVFCLPHLENLSF- 669

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
                             W +        NL  I  S+  L KL  L    C RL++ P 
Sbjct: 670 -----------------QWCQ--------NLSAIHYSVGFLEKLKILDGEGCSRLKSFPA 704

Query: 647 LP-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           +   +L     R C SLE  P  L  M S+  ++L
Sbjct: 705 MKLTSLEQFKLRYCHSLESFPEILGRMESIKELDL 739


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 266/746 (35%), Positives = 398/746 (53%), Gaps = 88/746 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYHELQRRGIRTFRDDPQLERGTAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
              +K++ W++ALT+ A L+G+ S   R E++LI EI   +  ++  +      ++ L G
Sbjct: 139 VGNKKVEGWRDALTKVASLAGWTSKDYRYETQLIREIVQALWSKVHPSLTVFGSSEKLFG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EEI+ LL   +  V  + IWG+GG+ K T+A  V+  IS  FE   F  NVRE  
Sbjct: 199 MDTKLEEIDVLLDKEANDVRFIGIWGMGGMGKTTLARLVYENISHQFEVCIFLANVREVS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------- 262
            T G+  LQK++LS++ K+ N++  ++ S + R+ R    K+V +V DDV          
Sbjct: 259 ATHGLVHLQKQILSQIFKEENVQVWDVYSGITRIKRCFWNKEVLLVLDDVDQSEQLENLV 318

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTR++ VL      K Y +K L   +A +LF   AF     +    
Sbjct: 319 GEKDWFGLRSRIIITTRNRHVLVTHGIEKPYELKGLKVDEALQLFSWKAFRNYEPEEDFA 378

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           E +   ++YA G+PLALK+LG +L  RS + W S+ +KL+  P+  + E+LK+S+D LDD
Sbjct: 379 EESKSFVRYAGGLPLALKILGSFLYKRSLDSWSSSFQKLKQTPNPTVFEILKVSFDGLDD 438

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLR 420
            +K +FLDIACF    H + +I    +S             KSL+ +  +  I MHDL++
Sbjct: 439 MEKKIFLDIACFRWLYHNESMIEQVYSSEFCSHIAIDVLVEKSLLTISSYNWIYMHDLIQ 498

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG EIVRKE+   PG R+RLW  KDI+ V  KNTGTEAIEGISL + ++  E   N  A
Sbjct: 499 EMGCEIVRKEN-EEPGGRSRLWLRKDIFHVFTKNTGTEAIEGISLHLYEL-EEADWNLEA 556

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
           FSKM KL+ L  +   N  +    + +P A +R L W   P K+L  C   ++L  L + 
Sbjct: 557 FSKMCKLKLLYIH---NLRLSLGPKFIPNA-LRFLSWSWYPSKSLPPCFQPDELTELSLV 612

Query: 539 CTKVEQLWDDVQ---RLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TT 592
            + ++ LW+ ++    L S   ++   +T          R PD   + NLE L ++G T 
Sbjct: 613 HSNIDHLWNGIKYSRNLKSINLSYSINLT----------RTPDFTGIPNLEKLVLEGCTN 662

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + ++  S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE    + 
Sbjct: 663 LVKVHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMK 721

Query: 653 LLS--ARNCTSLEKLPAGLSSMSSVL 676
            LS  +   T++EKLP+ +  +S  L
Sbjct: 722 RLSKLSLGGTAIEKLPSSIEHLSESL 747



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 135/330 (40%), Gaps = 60/330 (18%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
            L +SL  F +  T  + DC + E                    E+P  +G LS ++ L L
Sbjct: 789  LLASLKHFSSLTTLNLNDCNLCEG-------------------EIPNDIGSLSSLESLEL 829

Query: 612  SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL-LSARNCTSLEKL--PAG 668
              N N   +  SI  LSKL  + + +C RLQ LPELP +  L +   NCTSL+    P  
Sbjct: 830  RGN-NFVSLSASIHLLSKLKHINVENCRRLQQLPELPASDYLRVVTDNCTSLQMFPDPQD 888

Query: 669  LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF----PGNEIPKW 724
            L  + +  + N  N L    N+ +       +K  L E    + S YF    PG+EIP+W
Sbjct: 889  LCRIGNFEF-NCVNCLSTVGNQDASYFLYSVLKRLLEETH--RSSEYFRFVIPGSEIPEW 945

Query: 725  FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVC 784
            F +QS+G S T K     P+ Y   I FA CA++V P        K           ++ 
Sbjct: 946  FNNQSVGDSVTEKL----PSDY-MWIGFAVCALIVPPDNPSAVPEK----------ISLR 990

Query: 785  CDWKRKS----EGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDE--FSFRIHCSF 838
            C W + S     G         +  + SDH+FL        Y     +E  F F I+   
Sbjct: 991  CRWPKGSPWTHSGVPSRGACFVVKQIVSDHLFLLVLRKPENYLEDTCNEAKFDFSINNCI 1050

Query: 839  HFPPYLERGEVKKCGIHFVYAQDSADHILK 868
                     +VKKCG    Y  D  + I K
Sbjct: 1051 ---------KVKKCGARAFYQHDMDELISK 1071


>gi|357449963|ref|XP_003595258.1| Heat shock protein [Medicago truncatula]
 gi|355484306|gb|AES65509.1| Heat shock protein [Medicago truncatula]
          Length = 1558

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 266/754 (35%), Positives = 398/754 (52%), Gaps = 117/754 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+ FT +L++ L  K I TF+D++ I +G+ I+++L   I+ S I I+
Sbjct: 14  YDVFISFRGIDTRNTFTGNLYNSLDQKGIHTFLDEEEIQKGEQITRALFQAIQQSRIFIV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY V+PS VR QS ++G    +  +RF
Sbjct: 74  VFSNNYASSTFCLNELAVILECSNTHGRLLLPVFYDVEPSQVRHQSGAYGDALKKHEERF 133

Query: 100 PE---KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   K+++W++AL +AA++SG+   +  + E K I  I  +V K+++ T        VG
Sbjct: 134 SDDKDKVQKWRDALCQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTPLHVADNPVG 193

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFN-KISRHFEGSYFALNVRE 213
           ++  + ++ SLL IGS EG   + I+G GG+ K T+A AV+N ++S  F+G  F  ++RE
Sbjct: 194 LDYPVLDVASLLGIGSDEGANMVGIYGTGGVGKSTLARAVYNNQLSDQFDGVCFLADIRE 253

Query: 214 AEETGGIKDLQKKLLSEL--SKD---GNM-RNIESQLNRLARKKVRIVFDDVT------- 260
           +    G+  LQ+ LLSE+   KD   GN+ R I     RL  KKV +V DD+        
Sbjct: 254 STIKHGLVQLQETLLSEILCEKDIRVGNVNRGISIIKRRLQSKKVLLVLDDIDKAKQIQV 313

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGS++IITTRDK +L        Y +K+L    + +LF  +AF  +++D  
Sbjct: 314 LAGGHDWFGSGSKIIITTRDKHLLAINGILSLYEVKQLNNKKSLELFNWYAFKNNNVDPC 373

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +++ +A+ YA G+PLAL+V+G +LCGRS   W+ A+ K E IPH +I E LK+SY+ L
Sbjct: 374 YGDISKRAVSYAGGLPLALEVIGSHLCGRSLCAWKDALDKYEEIPHEDIHETLKVSYNDL 433

Query: 372 DDSQKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIRMHD 417
           D+  K +FLDIACF              L G   +  I +    KSL+ +D    +RMHD
Sbjct: 434 DEKDKGIFLDIACFFNSYEMSYVKEMLYLHGFKAENGIEVL-TDKSLMKIDDGGCVRMHD 492

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++DMGREIVR+ES   PGKR+RLW H DI  VL++NTGT+ IE I +++   ++E+  +
Sbjct: 493 LVQDMGREIVRQESTLEPGKRSRLWFHDDIIHVLEENTGTDTIEVIIINLCN-DKEVRWS 551

Query: 478 SYAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
             AF KM  L+ L     RF  D  K   S         +R L+W   P ++L  +   +
Sbjct: 552 GKAFKKMKNLKILIIRSARFSKDPQKLPNS---------LRVLDWSGYPSQSLPSDFNPK 602

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
            L+ L +                S L +FK PI                 E+L +L   G
Sbjct: 603 NLMILSLH--------------ESCLISFK-PIK--------------AFESLSFLDFDG 633

Query: 591 TT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---E 646
              + ELP SL  L  +  L L + +NL  I  S+  L+KL  L    C +L+ L     
Sbjct: 634 CKLLTELP-SLSGLVNLWALCLDDCTNLITIHNSVGFLNKLVLLSTQRCTQLELLVPTIN 692

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           LP +L  L  R C+ L+  P  L  M ++  V L
Sbjct: 693 LP-SLETLDMRGCSRLKSFPEVLGVMKNIRDVYL 725


>gi|356506795|ref|XP_003522161.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1088

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 265/773 (34%), Positives = 394/773 (50%), Gaps = 105/773 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VF+SFRGEDTR  FTSHL+  L    I  F DD+ L RGD IS SLL  IE S I+++
Sbjct: 12  YEVFMSFRGEDTRATFTSHLYAALQNAGIIVFKDDESLPRGDQISDSLLLAIEQSQISVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA SRW                      FY VDPS VR Q+  FG  F  L  R 
Sbjct: 72  VFSTNYADSRWCLQELEKIMNCKRTIGQVVLPVFYDVDPSQVRYQTGHFGESFQNLSNRI 131

Query: 100 ----PEK-----------------MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDV 138
                EK                 + RW+  L EAA ++G      R ES+ I+ I  +V
Sbjct: 132 LKDDDEKAVGEGESDKEYMMSRVLISRWRKVLREAASIAGVVVLNSRNESETIKNIVENV 191

Query: 139 LKRLDATFQSKNKGLVGVECSIEEIESLLCIG-----SEGVCKLRIWGIGGISKITIAGA 193
            + LD          VGVE  ++++   L +      S  V  L IWG+GGI K TIA A
Sbjct: 192 TRLLDKIELPLVDNPVGVESRVQDMIERLDLNHKQSNSNDVLLLGIWGMGGIGKTTIAKA 251

Query: 194 VFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDG-NMRNIE----SQLNRLA 248
           ++NKI R+FEG  F   + E      I+  Q++LL ++ K    + N+E    +   RL 
Sbjct: 252 IYNKIGRNFEGRSFLEQIGELWRQDAIR-FQEQLLFDIYKTKRKIHNVELGKQALKERLC 310

Query: 249 RKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYA 292
            K+V +V DDV                 SGSR+IITTRDK +L+    +K Y MKE+  +
Sbjct: 311 SKRVFLVLDDVNDVEQLSALCGSREWFGSGSRIIITTRDKHILRGDRVDKMYTMKEMDES 370

Query: 293 DAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL 352
           ++ +LF   AF          EL++  I+Y+ G+PLAL VLGC+L       W++ + KL
Sbjct: 371 ESIELFSWHAFKQASPREGFTELSNDVIEYSGGLPLALTVLGCHLFDMKIIEWKTVLDKL 430

Query: 353 EIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA----------- 400
           + IPH ++++ LKISYD L DD+++++FLDIACF  G  R++ + I +            
Sbjct: 431 KRIPHDQVQKKLKISYDGLSDDTERDIFLDIACFFIGMDRNDAMCILNGCGLFAENGIRV 490

Query: 401 --SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE 458
              +SL+ +D   ++ MHDLLRDMGREI+R +S     +R+RLW ++D+  VL K TGT+
Sbjct: 491 LVERSLVTVDDKNKLGMHDLLRDMGREIIRAKSPKDLEERSRLWFNEDVLDVLAKKTGTK 550

Query: 459 AIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWP 518
            IEG++L +   N     ++ AF +M KLR L+  G +      +L      ++R L W 
Sbjct: 551 TIEGLALKLPLTNSNC-FSTEAFKEMKKLRLLQLAGVQLDGDFEYLS----KDLRWLCWN 605

Query: 519 QCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERL 576
             PLK +  N     LVS+++  + V+ +W + Q +       K  I   +     L + 
Sbjct: 606 GFPLKCIPKNFHQGSLVSIELENSNVKLVWKEAQLME------KLKI-LNLSHSHNLTQT 658

Query: 577 PD--ELENLEYLT-VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
           PD   L NLE L  +    + E+  ++G L+ +  + L +  +L  +P SI  L  L  L
Sbjct: 659 PDFSNLPNLEKLVLIDCPRLFEVSHTVGHLNKILMINLKDCISLHSLPRSIYKLKSLKTL 718

Query: 634 FISHCERLQTLP---ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
            +S C ++  L    E   +L  L A N T++ K+P  + +  S+ Y+++C +
Sbjct: 719 ILSGCLKIDKLEEDLEQMESLMTLIADN-TAITKVPFSIVTSKSIGYISMCGY 770


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 265/811 (32%), Positives = 398/811 (49%), Gaps = 142/811 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR NFT HL+  L  + I+TF DD+L  G+ I   LL  IE S  ++I+
Sbjct: 24  YDVFLSFRGADTRSNFTDHLYSALGRRGIRTFRDDKLREGEAIGPELLTAIEESRSSVIV 83

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA S W                      FY VDPSHVR+++ SFG+ F+     + 
Sbjct: 84  FSENYAHSTWCLDELVKIMERHKDRGHAVFPIFYHVDPSHVRRKTESFGKAFAGYEGNWK 143

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ RWK ALTEAA+LSG+       ES  I+EI + +  RL          LVG++  +
Sbjct: 144 DKIPRWKTALTEAANLSGWHQRD-GSESNKIKEITDIIFHRLKCKRLDVGANLVGIDSHV 202

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           +E+   L + S  V  + I+G+GG+ K TIA  ++N++S  FE   F  N+RE      +
Sbjct: 203 KEMILRLHMESSDVRIVGIYGVGGMGKTTIAKVIYNELSCEFECMSFLENIREVSNPQVL 262

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNR-------LARKKVRIVFDDVTS------------ 261
             LQ +LL ++ +    +NI S  ++       L+ KKV +V DDV              
Sbjct: 263 YHLQNQLLGDILEGEGSQNINSVAHKASMIKDILSSKKVFMVLDDVDDPSQLENLLGHRE 322

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS+VIITTRDK VL     +  Y +K L + +AH+LF  +AF  +   +++ +L+ 
Sbjct: 323 WLGEGSKVIITTRDKHVLAVQEVDVLYEVKGLNFKEAHELFSLYAFKQNLPQSNYRDLSH 382

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + Y QG+PLALKVLG  L  ++   WES + KL+  P ++I  VLK SYD LD ++K 
Sbjct: 383 RVVGYCQGLPLALKVLGSLLFKKTIPQWESELDKLDKEPEMKIHNVLKRSYDGLDRTEKK 442

Query: 378 VFLDIACFLEGEH-RDEVISIFD-----ASKSLINLD-------LFYRIRMHDLLRDMGR 424
           +FLD+ACF +GE  RD V  I D     A + + NL+        + +I MHDL+R  G 
Sbjct: 443 IFLDVACFFKGEEDRDFVSRILDGCHFHAERGIRNLNDRCLITLPYNQIHMHDLIRQTGW 502

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR++  N P K +RLW  +DI + L+   G E +E I L+++   R +  NS  FSKM
Sbjct: 503 EIVREKFPNEPNKWSRLWDTQDIQRALRTYEGIEGVETIDLNLSDFER-VCFNSNVFSKM 561

Query: 485 PKLRFLRFYGDKNKCMVSH---------------------LEGVPFAEVRHL-------E 516
             LR LR + D      SH                     L+ +   ++ H        E
Sbjct: 562 TNLRLLRVHSDDYFDPYSHDDMEEEEDEEDEEEEEEKEKDLQSLKVIDLSHSNKLVQMPE 621

Query: 517 WPQCP----------LKTLNICA-----EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFK 560
           +   P          +  +NI       +KL +L +  C K       ++ LPSS+   +
Sbjct: 622 FSSMPNLEELILKGCVSLINIDPSVGDLKKLTTLDLRGCVK-------LKGLPSSISNLE 674

Query: 561 TPITFEIIDCKMLERLPD------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNN 614
                ++  C   ++  +       + +L +L ++ T IRELP S+  L  V+ L LS+ 
Sbjct: 675 ALECLDLTRCSSFDKFAEIQGIQGNMSSLTHLYLRKTAIRELPSSID-LESVEILDLSDC 733

Query: 615 SNLERIPES-----------------------IRHLSKLTFLFISHCERLQTLPELPCNL 651
           S  E+ PE+                       I +   L  L +S+C + +  PE   N+
Sbjct: 734 SKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNM 793

Query: 652 GLLSAR--NCTSLEKLPAGLSSMSSVLYVNL 680
             L     N TS++ LP  +  + S+  ++L
Sbjct: 794 KSLKKLRFNGTSIKDLPDSIGDLESLEILDL 824



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 150/364 (41%), Gaps = 106/364 (29%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE--------------------------LEN 582
            ++ LP S+   ++  + ++ +C   E+ P++                          LE+
Sbjct: 1004 IKDLPDSIGDLESLESLDLSECSKFEKFPEKGGNMKSLKELYLINTAIKDLPDSIGGLES 1063

Query: 583  LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLER--IPESIRHLSKLTFLFISHCER 640
            L+ L +K T I++LP ++ RL ++KRLIL + S++    I   + +L K     IS CE 
Sbjct: 1064 LKILNLKNTAIKDLP-NISRLKFLKRLILCDRSDMWEGLISNQLCNLQKPN---ISQCEM 1119

Query: 641  LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
             + +P LP +L  + A +CTS E L       S +L+  LC+                W+
Sbjct: 1120 ARQIPVLPSSLEEIDAHHCTSKEDL-------SGLLW--LCH--------------RNWL 1156

Query: 701  KHSLYEERGIKKSMYFP-GNEIPKW-FRHQSMGSSATLKTRPPRPAGYNKLISFA--FCA 756
            K +  E +  K S   P  + I +W  R+Q++GS  T K     P  + +   F   F +
Sbjct: 1157 KSTAEELKSWKLSARIPESSGIQEWRIRYQNLGSEVTAKL----PMNWYEDPDFLGFFVS 1212

Query: 757  VVVFPAFLKYFRHKSG---EDDWDGNVYA----VCCDWKRKSEGH-------LYSWFLGK 802
             V  P+      HKS    E +  GN +       CD    S G+       ++ W+  K
Sbjct: 1213 CVYQPS------HKSTLKCELNLHGNGFEFKDRTWCDCWCGSHGNFKELIDQVWVWWYPK 1266

Query: 803  ISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDS 862
            I+                    P     S  I+ SF  P       +KKCGI+ ++A D 
Sbjct: 1267 IAI-------------------PKELRKSTHINASFKNPGI----NIKKCGINLIFAGDQ 1303

Query: 863  ADHI 866
             +H+
Sbjct: 1304 RNHM 1307



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 28/167 (16%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+ +  +++    ++  C   E+ P++   +++L+ L   GT+I++LP+S+G L  
Sbjct: 759 IKELPTGIANWESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLES 818

Query: 606 VKRLILS-----------------------NNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L LS                       N ++++ +P+SI  L  L  L +S+C + +
Sbjct: 819 LEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFE 878

Query: 643 TLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
             PE   N+  L   +   T+++ LP  +  + S+  ++L   LK +
Sbjct: 879 KFPEKGGNMKSLKKLHLKNTAIKDLPDSIGDLESLEILDLSKCLKFE 925



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 13/143 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   ++    ++  C   E+ P++   +++L+ L   GT+I++LP+S+G L  
Sbjct: 806 IKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLES 865

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
           ++ L LS  S  E+ PE   ++  L  L + +      + +LP ++G      +L    C
Sbjct: 866 LEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNT----AIKDLPDSIGDLESLEILDLSKC 921

Query: 660 TSLEKLPAGLSSMSSVLYVNLCN 682
              EK P    +M S+  ++L N
Sbjct: 922 LKFEKFPEKGGNMKSLKKLSLIN 944



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 30/219 (13%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEW----PQCPLKTLNICAEKLVSLKMPC 539
            M  L+ LRF G   K +   +  +   E+  L +     + P K  N+ + K + LK   
Sbjct: 840  MKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTA 899

Query: 540  TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIREL 596
                     ++ LP S+   ++    ++  C   E+ P++   +++L+ L++  T I++L
Sbjct: 900  ---------IKDLPDSIGDLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDL 950

Query: 597  PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-------TLPELPC 649
            P+S+G L  ++ L LS  S  E+ PE   ++ K++     H E+++        + +LP 
Sbjct: 951  PDSVGDLESLEILHLSECSKFEKFPEKGGNMKKISGEGREH-EKIKAVSLINTAIKDLPD 1009

Query: 650  NLGLLSA------RNCTSLEKLPAGLSSMSSVLYVNLCN 682
            ++G L +        C+  EK P    +M S+  + L N
Sbjct: 1010 SIGDLESLESLDLSECSKFEKFPEKGGNMKSLKELYLIN 1048



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 29/160 (18%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LPSS+   ++    ++ DC   E+ P+   N++ L    ++ T I+ELP  +     
Sbjct: 713 IRELPSSI-DLESVEILDLSDCSKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWES 771

Query: 606 VKRLILS-----------------------NNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L LS                       N ++++ +P+SI  L  L  L +S+C + +
Sbjct: 772 LEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFE 831

Query: 643 TLPELPCNLGLLSAR--NCTSLEKLPAGLSSMSSVLYVNL 680
             PE   N+  L     N TS++ LP  +  + S+  ++L
Sbjct: 832 KFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDL 871


>gi|357517699|ref|XP_003629138.1| TMV resistance protein N [Medicago truncatula]
 gi|355523160|gb|AET03614.1| TMV resistance protein N [Medicago truncatula]
          Length = 1084

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 254/755 (33%), Positives = 393/755 (52%), Gaps = 88/755 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRG+DTR++F SHL+  L  + IKTF+DD+ L +G+ +   L   IE S I+I
Sbjct: 10  IYDVFINFRGKDTRNDFVSHLNAALQNRGIKTFLDDEKLGKGEKLGPQLEKAIEGSLISI 69

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ S  YA S W                      FY VDPS VRKQ+  FG+       +
Sbjct: 70  VVLSPDYAESSWCLNELVHILKCQKTYGQVVMPVFYHVDPSVVRKQTGDFGKALELTATK 129

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
             +K+   WK AL + A ++G+D   IR + +L ++I   +LK LD +  S  K  +G+E
Sbjct: 130 KEDKLLSNWKTALKQVATIAGWDCYNIRNKGELAKQIVEAILKILDISLLSITKYPIGLE 189

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREA-- 214
             +++I   +   S  VC + IWG+GG  K T A A++NKI R FEG + F  ++RE   
Sbjct: 190 SRVQKITKFIDNQSNKVCMIGIWGMGGSGKTTTAKAIYNKIHRRFEGRTSFFESIREVCD 249

Query: 215 -EETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVT--------- 260
               G I   Q+ LL  L     + +I   +     RL  +K  IV DDVT         
Sbjct: 250 NNSRGVIHLQQQLLLDLLQIKQEIHSIALGMTKIEKRLRGQKAFIVLDDVTTPEQLKALC 309

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGS +IITTRD ++L +   +  + M E+    + +LFC  AF   +      
Sbjct: 310 ADPKLFGSGSVLIITTRDARLLNSLSDDHIFTMTEMDKYQSLELFCWHAFQQPNPREGFC 369

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           ELT K + Y  G+PLAL+VLG YL  R K  W+SA+ KLE IP+ ++++ L+ISYD L+D
Sbjct: 370 ELTKKVVAYCGGLPLALEVLGSYLSMRKKLEWKSALSKLEKIPNNQVQQKLRISYDGLED 429

Query: 374 -SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            ++K++FLDI CF  G++R +V  I +               +SLI +D   +++MHDLL
Sbjct: 430 YTEKDIFLDICCFFIGKNRADVTEILNGCGLHADIGIVVLIERSLIKVDKNNKLQMHDLL 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           RDMGR IV + S+  P K +RLW H D+  VL K TGT+ IEG+ L   +  R I   + 
Sbjct: 490 RDMGRAIVGEISVKEPAKHSRLWFHDDVLDVLSKKTGTDTIEGMILKCQRTGR-IIFGTN 548

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLE---GVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           +F +M KLR L+  G        HL    G+   ++R ++W +   K +  +   E LV 
Sbjct: 549 SFQEMQKLRLLKLDG-------VHLMGDYGLISKQLRWVDWQRSTFKFIPNDFDLENLVV 601

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
            ++    V Q+W + + L       K  I   +   K L+  PD  +L NLE L +K   
Sbjct: 602 FELKHGNVRQVWQETKLLD------KLKI-LNLSHSKYLKSTPDFAKLPNLEKLIMKDCQ 654

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-- 649
           ++ E+  S+G L  +  +   + ++L  +P+ +  +  +  L +S C  +  L E     
Sbjct: 655 SLSEVHTSIGDLKNLLLINFKDCTSLGNLPKEVYKVRSVKSLILSGCSMIDKLEEDILQM 714

Query: 650 -NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
            +L  L A N T ++++P  ++   S+ Y++LC +
Sbjct: 715 ESLTTLIAAN-TGIKQVPYSIARSKSIAYISLCGY 748


>gi|224130518|ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 264/746 (35%), Positives = 404/746 (54%), Gaps = 95/746 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L  + + TF DDQ L RG+ IS+ LL  I+ S  ++I
Sbjct: 14  YDVFLSFRGEDTRKSFTDHLYTALCHRGVITFRDDQELERGNEISRELLQAIQDSRFSVI 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  Y SS W                      FY VDPS VR Q+    + F+   + F
Sbjct: 74  VFSRNYTSSTWCLNELVKIVECMKQGRQTVIPVFYDVDPSEVRNQTGRLQQAFADHEEVF 133

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN---KGL 153
               EK++ W+ A+   A+LSG+D    R ES+ I+ I  +++ +L  +  S +   + L
Sbjct: 134 KDNIEKVQTWRIAMKLVANLSGWDLQD-RHESEFIQGIVEEIVCKLRKSSYSMSWVTENL 192

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS---KITIAGAVFNKISRHFEGSYFALN 210
           VG++  +EE+   L +G E +  +R+ GI G+    K TIA AV+ K+  HFEGS F  N
Sbjct: 193 VGMDWRLEEMS--LYLGVEQLNDVRVIGICGMGGIGKTTIARAVYEKMLGHFEGSSFLAN 250

Query: 211 VREAEETGGIKDLQKKLLSE--LSKDGNMRNIESQLN----RLARKKVRIVFDDVT---- 260
           VRE EE  G+  LQ++LLS+  + +   + ++   +N    RL  + V +V DDV     
Sbjct: 251 VREVEEKHGLVRLQEQLLSDTLMDRRTKISDVHRGMNEIRVRLRSRMVLVVLDDVDQLVQ 310

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GSRVIITTRD+ +LK    +K YR+  L   +A +LFC  AF     
Sbjct: 311 LESLVGDRNWFDNGSRVIITTRDELLLKQFGVDKIYRVASLNNIEAVQLFCLKAFRSYCP 370

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              ++  T + +KYA G+PLAL VLG +  G RS E+W  ++++L+ IP   I + LKIS
Sbjct: 371 PEDYVLQTIQVVKYADGLPLALHVLGSFFSGIRSVELWNHSLKRLKDIPDKGILDKLKIS 430

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIR 414
           +D L++ +K +FLDIACF  G   D V  + ++S             K LIN+    R+ 
Sbjct: 431 FDGLNEVEKKIFLDIACFFNGWEEDCVTKLMESSGFYPQIGIRILVEKFLINIS-DNRVW 489

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDLL++MGR+IV++ES   PGKR RLW  +D+  VL  NTGT+ +EGI L+ N     +
Sbjct: 490 MHDLLQEMGRQIVKRESHEEPGKRTRLWLCEDVIHVLLNNTGTDKVEGIVLNSNDEVDGL 549

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           ++++ +  KM +LR L+         + +L      E+R+LEW + P K+L      +KL
Sbjct: 550 YLSAESIMKMKRLRILKLQNINLSQEIKYLSN----ELRYLEWCRYPFKSLPSTFQPDKL 605

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L M  + ++QLW+ V+ L       K     ++   + L + PD  ++ NLE L ++G
Sbjct: 606 VELHMRHSSIKQLWEGVRPL-------KLLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEG 658

Query: 591 T-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
              + ++ +S+G L  +  L L +   L  +P +I  L  L  L +  C +L+ LPE+  
Sbjct: 659 CRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEM-- 716

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSV 675
            LG     N  +LE+L  G ++++ +
Sbjct: 717 -LG-----NVINLEELDVGRTAITQL 736



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 17/175 (9%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP+ +     ++ L L  N N  RIP SI  LSKL  L + +C++LQ+LP+LP  L  L
Sbjct: 805 ELPDDMSCFPSLEELDLIGN-NFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEYL 863

Query: 655 SARNCTSLEKLP-----AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLY---- 705
               C SL  LP        S   S++++N         N    +    W+K+ L+    
Sbjct: 864 GVDGCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQGNISMGLT---WLKYYLHFLLE 920

Query: 706 -EERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
              +G   S +   FPG+EIP WF H+S+G S T++  P      +K +  A CA
Sbjct: 921 SGHQGHPASWFFTCFPGSEIPSWFHHKSVGHSLTIRLLPYEHWSSSKWMGLAVCA 975



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 61/277 (22%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKR 608
           LP+++C  KT     +  C  LE+LP+ L N   LE L V  T I +LP + G   W K 
Sbjct: 689 LPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGL--WKKL 746

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL-------------LS 655
            +LS +      P+S   L    F F       ++LP  PC + L             L+
Sbjct: 747 KVLSFDGCKGPAPKSWYSL----FSF-------RSLPRNPCPITLMLSSLSTLYSLTKLN 795

Query: 656 ARNCTSLE-KLPAGLSSMSSVLYVNLC--NFLKLDPNELSEIVKDGWMKHSLYEERGIKK 712
             NC  +E +LP  +S   S+  ++L   NF+++ P+ +S + K   ++         KK
Sbjct: 796 LSNCNLMEGELPDDMSCFPSLEELDLIGNNFVRI-PSSISRLSKLKSLRLG-----NCKK 849

Query: 713 SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSG 772
               P  ++P    +  +   A+L T P           F  CA   F + +  F + S 
Sbjct: 850 LQSLP--DLPSRLEYLGVDGCASLGTLPNL---------FEECARSKFLSLI--FMNCSE 896

Query: 773 EDDWDGNVYAVCCDW---------KRKSEGHLYSWFL 800
             D+ GN+ ++   W         +   +GH  SWF 
Sbjct: 897 LTDYQGNI-SMGLTWLKYYLHFLLESGHQGHPASWFF 932


>gi|82542037|gb|ABB82026.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1070

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 253/720 (35%), Positives = 378/720 (52%), Gaps = 88/720 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR  FT+HL+  L    I T+  DD+L RG+ IS  LL  I+ S I+I 
Sbjct: 15  YDVFLSFRGKDTRKTFTNHLYTALVQAGIHTYRDDDELPRGEEISDHLLRAIQKSKISIP 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  KR
Sbjct: 75  VFSKGYASSRWCLNELLEILKCKNRKTGQIVLPIFYDIDPSDVRKQNDSFAEAFVKHEKR 134

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA +LSG++ N +    E+K I++I  DVL +LD  +    + LVG
Sbjct: 135 FEEKLVKEWRKALEEAGNLSGWNLNAMANGYEAKFIKKIIKDVLNKLDPKYLYVPEHLVG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++    +I   L   ++ V    I G+ GI K TIA  VFN++   FEGS F  N+ E +
Sbjct: 195 MDRLAHDIFYFLSTATDDVRIAGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETS 254

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQ----LNRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++ K    N+ N++        RL  K+V +V DDV         
Sbjct: 255 KQLNGLALLQKQLLHDILKQDVANINNVDRGKVLIRERLCCKRVLVVADDVARQDQLNAL 314

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVI+TTRD  +L+   A++ Y+++EL    + +LF   AF        +
Sbjct: 315 MGQRSWFGPGSRVIMTTRDSNLLRK--ADRTYQIEELTRDQSLQLFSWHAFKDTKPAEDY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+  A+ Y  G+PLAL+V+G  L G  K +W+S + KL  IP  +I+  L+IS+D+LD
Sbjct: 373 IELSKDAVDYCGGLPLALEVIGACLSGEEKYIWKSEIDKLRRIPKHDIQGKLRISFDALD 432

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ +  +  A               +SLI + L   I MHD
Sbjct: 433 GEELQNAFLDIACFFIDIEKEYITKVLGARCSYDPEIDLKTLRKRSLIKV-LGGTITMHD 491

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGRE+VR+ S   PGKR R+W+ +D + VL++  GT+ +EG++LD+ + +    ++
Sbjct: 492 LLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDV-RASEAKSLS 550

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           + +F+KM +L  L+  G      +  L  V    +  + W +CPLK    +I  + L  L
Sbjct: 551 AGSFAKMKRLNLLQINGVHLTGSLKLLSKV----LMWICWHECPLKYFPSDITLDNLAVL 606

Query: 536 KMPCTKVEQLWD--------DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT 587
            M  + +++LW          +  L  S    KTP     +    LE+L   LE    L 
Sbjct: 607 DMQYSNLKELWKGEKILNKLKIINLSHSQNLVKTP----NLHSSSLEKLI--LEGCSSLV 660

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
                ++ LPES+G +  +K + +S  S LE++PE +  +  L  L     E  Q L  +
Sbjct: 661 KGCWRLKILPESIGNVKSLKSMNISGCSQLEKLPEHMDDMESLIELLADGIENEQFLSSI 720



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 42/155 (27%)

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
           LS ++ L LS N     +P  I  L  L  L +  C  L ++P+LP NLG L A  C SL
Sbjct: 806 LSSLEVLDLSRN-KFSSLPSGIAFLPNLGSLIVVGCNNLVSIPDLPSNLGYLGATYCKSL 864

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIP 722
           E+               +CN               G   +  + ER        PG E+P
Sbjct: 865 ER--------------AMCN---------------GGHIYHFHAER-------IPG-EMP 887

Query: 723 KWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           KW  ++  G S +       P  +  L+ +  C +
Sbjct: 888 KWLSYRGEGCSLSFHI----PPVFQGLVVWVVCPL 918


>gi|357499211|ref|XP_003619894.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494909|gb|AES76112.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1064

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 261/750 (34%), Positives = 394/750 (52%), Gaps = 93/750 (12%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRG DTR+ FT +L+  L  K I+TFIDD  L RGD I+ SL+  IE S I I IF
Sbjct: 9   VFLSFRGSDTRNKFTGNLYKALVDKGIRTFIDDNDLERGDEITPSLVKAIEESRIFIPIF 68

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP- 100
           S  YASS +                      FY V+P+H+R QS  +G H ++  +RF  
Sbjct: 69  SANYASSSFCLDELVHIIHCYKTKSCLVFPVFYDVEPTHIRNQSGIYGEHLTKHEERFQN 128

Query: 101 -----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                E++++WK AL +AA+LSG+  +    E K IE+I  D+   ++  F +  K  VG
Sbjct: 129 NEKNMERLRQWKIALIQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLNVAKYPVG 188

Query: 156 VECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  IEE++ LL +GSE   ++  ++G GG+ K T+A AV+N ++  FEG  F  NVRE 
Sbjct: 189 LQSRIEEVKLLLDMGSEDEVRMVGLFGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVREN 248

Query: 215 EETGGIKDLQKKLLSELSK-DGNMRNIESQLN----RLARKKVRIVFDDVTS-------- 261
                +K LQ+ LL    K +  + ++   ++    RL+RKK+ ++ DDV          
Sbjct: 249 SSHNNLKHLQEDLLLRTVKLNHKLGDVSEGISIIKERLSRKKILLILDDVDKLEQLEALA 308

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSRVIITTRDK +L        + ++EL   +A +L  + AF  D + +S+ 
Sbjct: 309 GGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSSYE 368

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           E+ ++ + YA G+PLA+  +G  L GR  E WE  + + E IP  +I+ +L++SYD+L +
Sbjct: 369 EILNRVVTYASGLPLAIVTIGGNLFGRKVEDWERTLDEYENIPDKDIQRILQVSYDALKE 428

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLI-NLDLFYRIRMHDL 418
             ++VFLDIAC  +G    +V  I                A KSLI + +    + +HDL
Sbjct: 429 KDQSVFLDIACCFKGCEWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTYVTLHDL 488

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + DMG+EIVR+ES N PG+R+RLW   DI  VL+ NTGT  IE I L+ +   RE   + 
Sbjct: 489 IEDMGKEIVRQESPNKPGERSRLWFPDDIVNVLRDNTGTGNIEMIYLEFDSTARETEWDG 548

Query: 479 YAFSKMPKLRFLRF-YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK----LV 533
            A  KM  L+ L   Y +      S   G   + +R+ +W  CPLK+L+  + K    + 
Sbjct: 549 MACKKMTNLKTLIIEYAN-----FSRGPGYLPSSLRYWKWIFCPLKSLSCISSKEFNYMK 603

Query: 534 SLKMPCTKVEQLWDDVQRLPS-SLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVK 589
            L +  ++      DV  LP+   C+F+        +C+ L R+      L  LE L   
Sbjct: 604 VLTLNYSRYLTHIPDVSGLPNLEKCSFQ--------NCESLIRIHSSIGHLNKLEILNAS 655

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIP--ESIRHLSKLTFLFISHCERLQTLP-- 645
           G +  E    L  LS +K+  +S+  +L++I    SI HL+KL  L  S+C +L+  P  
Sbjct: 656 GCSKLEHFPPLQLLS-LKKFKISHCESLKKITIHNSIGHLNKLEILNTSNCLKLEHFPPL 714

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
           +LP +L       C SL+  P  L  M+++
Sbjct: 715 QLP-SLKKFEISGCESLKNFPELLCKMTNI 743



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 89/232 (38%), Gaps = 36/232 (15%)

Query: 565 FEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIP 621
           FEI  C+ L+  P+   ++ N++ + +  T+I EL  S    S ++RL +S    L R P
Sbjct: 722 FEISGCESLKNFPELLCKMTNIKDIEIYDTSIEELRYSFQNFSELQRLTISGGGKL-RFP 780

Query: 622 ESIRHLSKLTFLFISHCE-RLQTLPELPCNLGLLSARNCTSLEK-------LPAGLSSMS 673
           +    ++ + F  + H + R   L +    + L    N T L+        LP  L    
Sbjct: 781 KYNDTMNSIVFSNVEHVDLRDNNLSDECLPILLKWFVNVTFLDLSENYFTILPECLGECH 840

Query: 674 SV--LYVNLCNFLK----LDPN----------ELSEIVKDGWMKHSLYEERGIKKSMYFP 717
            +  LY+  C  L+    + PN           LS       M   L+E  G      FP
Sbjct: 841 RLKHLYLKFCEALEEIRGIPPNLERLCADECYSLSSSSIRMLMSQKLHESAGCTH-FRFP 899

Query: 718 GN--EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF 767
                IP WF HQS G           P+     ISF F  +      +K F
Sbjct: 900 NKTRRIPDWFEHQSRGGKIAFWYHKKLPS-----ISFTFIIIYEHYTTVKLF 946


>gi|356560717|ref|XP_003548635.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 249/766 (32%), Positives = 397/766 (51%), Gaps = 96/766 (12%)

Query: 14  RDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW- 71
           R NF SHL+  LS   + TF+D+    +G+ +++ LL TIE   I +++FS  Y +S W 
Sbjct: 2   RWNFVSHLYSALSNAGVNTFLDEMNYPKGEELNEGLLRTIEGCRICVVVFSTNYPASSWC 61

Query: 72  --------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK-MKRWKNAL 110
                                FY VDPSH+R Q  +FG++    +  + +  + RW+  L
Sbjct: 62  LKELEKIIECHRTYGHIVLPIFYDVDPSHIRHQRGAFGKNLKAFQGLWGKSVLSRWRTVL 121

Query: 111 TEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIG 170
           TEAA+ SG+D +  R E++L++EIA DVL +LD TF    +  VG+E  ++E+   +   
Sbjct: 122 TEAANFSGWDVSNNRNEAQLVKEIAEDVLTKLDNTFMHMTEFPVGLESHVQEVIGYIENQ 181

Query: 171 SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG--GIKDLQKKLL 228
           S  VC + IWG+GG+ K T A A++N+I R F G  F  ++RE  ET   G   LQ++LL
Sbjct: 182 STKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFMGRCFIEDIREVCETDRRGHLHLQEQLL 241

Query: 229 SELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVT----------------SGSRV 265
           S + K     NI+S         ++L+R+K  IV DDV                  GS V
Sbjct: 242 SNVLK--TKVNIQSVGIGRAMIESKLSRRKALIVLDDVIEFGQLKVLCGNRKWFGQGSIV 299

Query: 266 IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQG 325
           IITTRD ++L     +  Y+M+E+    + +LF   AFG         EL    + Y  G
Sbjct: 300 IITTRDVRLLHKLKVDFVYKMEEMDENKSLELFSWHAFGEAKPTEEFDELARNVVAYCGG 359

Query: 326 VPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS-QKNVFLDIAC 384
           +PLAL+V+G YL  R K+ WES + KL+IIP+ +++E L+ISY+ L D  +K++FLDI C
Sbjct: 360 LPLALEVIGSYLSERRKKEWESVLSKLKIIPNDQVQEKLRISYNGLGDHMEKDIFLDICC 419

Query: 385 FLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKES 431
           F  G+ R  V  I +               +SL+ +    ++ MH L+RDM REI+R+ S
Sbjct: 420 FFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLEMHPLIRDMDREIIRESS 479

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
              PGKR+RLW  +D   VL KNTGT+AIEG++L ++  +R+    +YAF  M +LR L+
Sbjct: 480 TKKPGKRSRLWFQEDSLNVLTKNTGTKAIEGLALKLHSSSRDC-FKAYAFKTMDQLRLLQ 538

Query: 492 FYGDKNKCMVSHLE-----GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
                    + H+E     G     +R + W + PLK +  N     ++++ +  + +  
Sbjct: 539 ---------LEHVELTGDYGYLPKHLRWIYWKRFPLKYMPKNFFLGGVIAIDLKHSNLRL 589

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLG 601
           +W + Q LP             +   K L   PD   L +LE L +K   ++ ++ +S+G
Sbjct: 590 VWKEPQVLP-------WLKILNLSHSKYLTETPDFSNLPSLEKLILKDCPSLCKVHQSIG 642

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS---ARN 658
            L  +  + L + ++L  +P  I  L  L  L +S C ++  L E    +  L+   A+N
Sbjct: 643 DLQNLLLINLKDCTSLSNLPREIYKLKSLETLILSGCSKIDKLEEDIVQMEYLTTLIAKN 702

Query: 659 CTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            T+++++   +  + S+ Y++LC +  L  N    I+   WM  ++
Sbjct: 703 -TAVKQVSFSIVRLKSIEYISLCGYEGLSRNVFPSIIL-SWMSPTM 746


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1378

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 269/783 (34%), Positives = 405/783 (51%), Gaps = 117/783 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRG+DTR+NFTSHL+  L+ + I  ++DD +L RG  I  +L   IE S  ++
Sbjct: 81  MYDVFLSFRGKDTRNNFTSHLYSNLAQRGIDVYMDDRELERGKTIEPALWKAIEESRFSV 140

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IIFS  YASS W                      FY VDPS V ++   + + F    + 
Sbjct: 141 IIFSGDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVAERKGQYQKAFVEHEQN 200

Query: 99  FPEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F E +++   WK+ L+   +LSG+D    R ES+ IE IA  +  +L  T    +K L+G
Sbjct: 201 FKENLEKVWIWKDCLSTVTNLSGWDVRK-RNESESIEIIAEYISYKLSVTMPV-SKNLIG 258

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +E +   +         + I G+GGI K T+A  V+++    F+GS F  NVRE  
Sbjct: 259 MDSRLEILNGYIGEEVGEAIFIGICGMGGIGKTTVARVVYDRFRWQFKGSCFLANVREVF 318

Query: 215 EETGGIKDLQKKLLSE-LSKDGNM----RNIESQLNRLARKKVRIVFDDVTS-------- 261
           +E  G + LQ++L+SE L K  N+    R IE    +L RKK+ IV DDV          
Sbjct: 319 DEKDGPRRLQEQLVSEILMKRANICDSSRGIEMIKRKLQRKKILIVLDDVDDRKQLESLA 378

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IIT+RD+QVL      + Y  ++L   DA  LF Q AF  D      +
Sbjct: 379 AESKWFGPGSRIIITSRDRQVLTRNGVARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFV 438

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+ + + YA G+PLAL+V+G ++ GRS   W SA+ +L  IP  EI +VL+IS+D L +
Sbjct: 439 ELSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNEIPDREIIDVLRISFDGLHE 498

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            +K +FLDIACFL+G  +D +I I D+              KSLI++    ++ MH+LL+
Sbjct: 499 LEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSR-DQVWMHNLLQ 557

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG+EIVR ES   PG+R+RLW ++D+   L  NTG E IE I LD+  + +E   N  A
Sbjct: 558 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDIPGI-KEAQWNMKA 616

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           FSKM KLR L+     N   +S        ++R LEW   P K+L   +  ++LV L M 
Sbjct: 617 FSKMSKLRLLKI----NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMA 672

Query: 539 CTKVEQLW-----------------------DDVQRLPS-----------------SLCT 558
            + +EQLW                        D+  +P+                 SL  
Sbjct: 673 NSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLESLILEGCISLSEVHPSLGR 732

Query: 559 FKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNS 615
            K      +I+C+ +  LP   E+E+L++ T+ G + +   P+ +G ++ + +L L    
Sbjct: 733 HKKLQYVNLINCRSIRILPSNLEMESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTG 792

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLP-ELPC--NLGLLSARNCTSLEKLPAGLSSM 672
             E  P SIRH+  L  L +++C++L+++   + C  +L  L    C+ L+ +P  L  +
Sbjct: 793 IAELSP-SIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKV 851

Query: 673 SSV 675
            S+
Sbjct: 852 ESL 854



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 39/217 (17%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ +  S+   K+    ++  C  L+ +P   +++E+LE   V GT+IR+LP S+  L  
Sbjct: 817  LESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKN 876

Query: 606  VKRLILSN-------------------------NSNLERIPESIRHLSKLTFLFISHCER 640
            +  L L                            +N   +P SI  LS L  L +  C  
Sbjct: 877  LAVLSLDGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTM 936

Query: 641  LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
            L++L E+P  +  ++   C SL+ +P  +   SS        F+ LD  EL E      M
Sbjct: 937  LESLLEVPSKVQTVNLNGCISLKTIPDPIKLSSS----QRSEFMCLDCWELYEHNGQDSM 992

Query: 701  KHSLYEE--RGIKKS-----MYFPGNEIPKWFRHQSM 730
               + E   +G+        +  PGNEIP WF HQ +
Sbjct: 993  GSIMLERYLQGLSNPRPGFRIVVPGNEIPGWFNHQKL 1029


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 271/784 (34%), Positives = 401/784 (51%), Gaps = 119/784 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRG DTR +FTSHL+  L  K I  +IDD+L  G+ I  ++L  IE S I+ +I
Sbjct: 3   HDVFISFRGTDTRYSFTSHLYDALQRKQIDAYIDDKLDGGEKIEPAILERIEESFISAVI 62

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA S +                      FYR+DP  V+  + S+G    +  K   
Sbjct: 63  FSENYADSTFCLRELSKILECMETKQQMVLPVFYRLDPCQVQNLTGSYGDALCKHEKDCG 122

Query: 101 EK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            K ++ W++A  E A+L G++SNVI+ E+KLI+EI +D+ K+L+       + LVG+E  
Sbjct: 123 SKEVESWRHASKEIANLKGWNSNVIKDETKLIQEIVSDIQKKLNHAPSIDAERLVGMESR 182

Query: 160 IEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           +E+IESLL  GS G V  + IWG+ GI K T A AV+++    FEG  F  NVRE  +  
Sbjct: 183 VEDIESLLSFGSTGTVLIVGIWGMCGIGKSTTAEAVYHRNCSKFEGHCFFQNVREESKKH 242

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT----------------SG 262
           GI             D  M         L RKKV IV DDV                  G
Sbjct: 243 GI-------------DHRM---------LQRKKVLIVLDDVNDPQVLKYLVGEDGLFGQG 280

Query: 263 SRVIITTRDKQVLKN-CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           SR+I+T+RD+QVL N C  +K Y +K L   DA +LF   AF  ++    +I L+   + 
Sbjct: 281 SRIIVTSRDRQVLINACDEDKIYEVKILDKDDALRLFSLHAFKQNNPIEGYIGLSKTVVS 340

Query: 322 YAQGVPLALKVLGCYL-CGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
             +G+PL L+VLG  +   RS E WES + +L      +I++ L++ Y  LD +QK +FL
Sbjct: 341 CVKGIPLVLEVLGASVYSKRSVEYWESKVAQLRTNGGEDIKKCLEMCYHELDQTQKKIFL 400

Query: 381 DIACFLEGEHRDEVISIFDASK-----SLINLDLFY----RIRMHDLLRDMGREIVRKES 431
           DIACF     RD +    D  +      LI++ L      +I MHD+L  +G++IV +E 
Sbjct: 401 DIACFFGRCKRDLLQQTLDLEERSGIDRLIDMCLIKIVQNKIWMHDMLLKLGKKIVLQEH 460

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
           ++ P +R+RLW   D+ +VL    GT  +E I L++  + +E+ ++  AF  M  LR L+
Sbjct: 461 VD-PRERSRLWKADDVNRVL-TTQGTRKVESIILNLLAITKEMILSPTAFEGMSNLRLLK 518

Query: 492 FY-----GDKNKCMVS-------HL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVS 534
           FY     GD +K  +        HL +G+ F   E+R L W   PLK+L  N C EKLV 
Sbjct: 519 FYYPPFFGDPSKEKIMNRRRVRIHLPQGLHFLSNELRILHWYNYPLKSLPSNFCPEKLVE 578

Query: 535 LKMPCTKVEQLWDDVQRLPS-----------------SLCTFKTPITFEIIDCKMLERLP 577
             M C+++EQLW++ Q L +                  L  F       +  C+ L  LP
Sbjct: 579 FHMHCSQLEQLWNEFQPLKNLKVMNLRSSSKLSLSDSDLSKFPNLEVLNLGQCRGLAGLP 638

Query: 578 DELENLEYLT----VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
             ++    LT     +  ++  LP S+G LS + +L L    +L  +P+SI  L  L  L
Sbjct: 639 SSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDSIGELKSLEDL 698

Query: 634 FISHCERLQTLP----ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLD 687
           ++  C +L +LP    EL C + L   R C+ L  LP  +  + S++ + L  C+ L+  
Sbjct: 699 YLYFCSKLASLPNSFRELKCLVKLNLIR-CSELVSLPDNIGELKSLVELKLFSCSKLESL 757

Query: 688 PNEL 691
           PN +
Sbjct: 758 PNSI 761



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 190/435 (43%), Gaps = 83/435 (19%)

Query: 480  AFSKMPKLRFLRFYGDKNKCMV-------SHLEGVP--FAEVRHLEWPQCPLKTLNICAE 530
              S   KL  L     K KC+V       S L  +P  F E++ L      L  ++ C  
Sbjct: 771  CLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLASLPDCFGELKSL-----VLLHISFCP- 824

Query: 531  KLVSLKMPCTKVEQLWD-------DVQRLPSSLCTFKTPITFEIIDCKMLERLP------ 577
            KLVSL     +++ L +       ++  LP+S+   ++     +  C ML + P      
Sbjct: 825  KLVSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLESLKWINLERCYMLNKSPVLNPRC 884

Query: 578  DELEN------LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
             E+E       L+YL +  + + E+P S+G L  ++ L LS N + ERIP +I+ L  L 
Sbjct: 885  SEVEEIAFGGCLQYLNLGASGVSEIPGSIGSLVSLRDLRLSCN-DFERIPANIKQLPMLI 943

Query: 632  FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA-----GLSSMSSVLYVNLCNFLKL 686
             L +  CERLQ LPELP +L +L A  C SL  L +     G    ++    N  N LKL
Sbjct: 944  KLDLHGCERLQHLPELPSSLQVLMASYCISLRSLASIFIQGGKEYAAASQQFNFSNCLKL 1003

Query: 687  DPNELSEIVKD-----GWMKHSLYEE----RGIKKSMYFPGNEIPKWFRHQSM-GSSATL 736
            D N  + I++D       M  SL+      + I+  +  PG E+P+WF +++  GSS  +
Sbjct: 1004 DQNACNRIMEDVHLRIRRMASSLFNREYFGKPIRVRLCIPGLEVPEWFCYKNTGGSSLNI 1063

Query: 737  KTRPPRPAGYNKLISFAFCAVVVF-------PAFLKYFRH--KSGEDDWDGNVYAVCCDW 787
                 R    ++ + F FCAVV F       P  ++   H    G +  D N Y  C + 
Sbjct: 1064 PAHWHRTTNTDQFLGFTFCAVVSFGNSKKKRPVNIRCECHLITQGGNQSDLNFY--CYEE 1121

Query: 788  KRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG 847
              + E  L+          E DHVF+            + +   F    SFHF       
Sbjct: 1122 VERKERCLW----------EGDHVFIW-----------SINSNCFFKEASFHFKQLWGTA 1160

Query: 848  E-VKKCGIHFVYAQD 861
            + V KCG+H ++ QD
Sbjct: 1161 DVVVKCGVHPLFVQD 1175



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT----VKGTTIRELPESLGRLSWVK 607
           LP+S    K  +   +I C  L  LPD +  L+ L        + +  LP S+G L  + 
Sbjct: 709 LPNSFRELKCLVKLNLIRCSELVSLPDNIGELKSLVELKLFSCSKLESLPNSIGGLKCLA 768

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-----NLGLLSARNCTSL 662
            L LSN S L  +P SI  L  L  L +S+  +L +LP+  C     +L LL    C  L
Sbjct: 769 ELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLASLPD--CFGELKSLVLLHISFCPKL 826

Query: 663 EKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWM 700
             LP  +  +  +  +NL  C+ L   PN +  +    W+
Sbjct: 827 VSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLESLKWI 866



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVK-GTTIRELPESLGR 602
           D +  LPSS+      +  ++I C+ L  LPD   EL++LE L +   + +  LP S   
Sbjct: 656 DSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDSIGELKSLEDLYLYFCSKLASLPNSFRE 715

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARN 658
           L  + +L L   S L  +P++I  L  L  L +  C +L++LP     L C L  L   N
Sbjct: 716 LKCLVKLNLIRCSELVSLPDNIGELKSLVELKLFSCSKLESLPNSIGGLKC-LAELCLSN 774

Query: 659 CTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
            + L  LP  +  +  ++ +NL  F KL
Sbjct: 775 FSKLTSLPNSIGKLKCLVKLNLSYFSKL 802


>gi|147778859|emb|CAN73697.1| hypothetical protein VITISV_038484 [Vitis vinifera]
          Length = 784

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 277/815 (33%), Positives = 406/815 (49%), Gaps = 174/815 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR++FT+HL+  L  K I TFIDD +L RGD IS +L+  I+ S  +++
Sbjct: 10  YDVFLSFRGEDTRNSFTAHLYKELRTKGINTFIDDDKLERGDVISSALVAAIQNSKFSLV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           + SE YASS W                      FY VDPSHVR+ +  FG   ++  +  
Sbjct: 70  VLSENYASSGWCLEELVKILECMRTMGQRVLPIFYDVDPSHVRQHNGKFGEALAKHEENL 129

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-DATFQSKNKGLVGV 156
           R  E++  W++ALT+ A+LSG+DS   + E  LI+ IA  +  +L   +    ++ LVG+
Sbjct: 130 RTMERVPIWRDALTQVANLSGWDSRN-KHEPMLIKGIATYIWNKLFSRSSNYADQNLVGI 188

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           E SI EI+SLL   S  V  + IWG+GGI K T+A AV+N+IS  FE   F  NV +  E
Sbjct: 189 ESSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHZFEACCFLENVSDYLE 248

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLN---RLARKKVRIVFDDVTS------------ 261
                 LQKK LS+L +D N+ NI+  ++    L  KKV IV DDV +            
Sbjct: 249 KQDFLSLQKKFLSQLLEDENL-NIKGCISIKALLCSKKVLIVIDDVNNSKILEDLIGKHG 307

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTR+KQ+L     N+ Y +++L   +A +LF ++AF   H    ++EL+ 
Sbjct: 308 WFGIGSRIIITTRNKQLLVTHGVNEVYEVEKLNDDNAVELFSRYAFKKAHPIDDYVELSQ 367

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             + YAQG+PLAL+VL                                       D++++
Sbjct: 368 CIVVYAQGLPLALQVL---------------------------------------DNERD 388

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACF +G  +  V+ IF +              KSLI++ +  ++ +H+LL+ MGR
Sbjct: 389 IFLDIACFFQGHDKXYVMEIFRSCGFFPDIGIRVLIEKSLISV-VENKLMIHNLLQKMGR 447

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR+ S   PGK +RLW H D+  VL KNTGT+ +EGISLD++ + +EI+  + AF+ M
Sbjct: 448 EIVREASPKEPGKXSRLWIHDDVNHVLTKNTGTKDVEGISLDLSSL-KEINFTNEAFAPM 506

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQ 544
            +LR L+            LE + F  ++H                K ++  +  ++V  
Sbjct: 507 NRLRLLKV-----------LENLKFMNLKH---------------SKFLTETLDFSRVTN 540

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLS 604
           L    +RL S      +     I D   L+ L   L +LE L +       LP ++ RL 
Sbjct: 541 L----ERLSSLKTLSLSACN--ISDGATLDSL-GFLSSLEDLDLSENNFVTLPSNIXRLP 593

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            +K L L N                        C+RLQ LPELP ++  + ARNCTSLE 
Sbjct: 594 XLKMLGLEN------------------------CKRLQALPELPTSIRSIMARNCTSLE- 628

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
                 ++S+  + +L   ++L  +    I +DG +  +L        S    G+ IP W
Sbjct: 629 ------TISNQSFGSLLMTVRLKEHIYCPINRDGLLVPAL--------SAVXFGSRIPDW 674

Query: 725 FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            R+QS G     +  PP     N  +  A C V V
Sbjct: 675 IRYQSSGXEVKAEL-PPNWFBSN-FLGLALCVVTV 707


>gi|356560031|ref|XP_003548299.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1091

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 269/723 (37%), Positives = 373/723 (51%), Gaps = 92/723 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRG DTR+ FT +L+  L  + I TFIDDQ L RGD I+ +L   I  S IAI
Sbjct: 11  IYDVFLSFRGLDTRNGFTGNLYKALGDRGIYTFIDDQELPRGDKITPALSNAINESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + SE YA S +                     FY+VDPS VR Q  S+G   ++ +KRF
Sbjct: 71  TVLSENYAFSSFCLDELVTILHCKSEGLLVIPVFYKVDPSDVRHQKGSYGETMTKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK++ W+ AL + ADLSG+   D +    E K I+ I   V + ++          
Sbjct: 131 ESKMEKLREWRMALQQVADLSGYHFKDGDAY--EYKFIQSIVEQVSREINRAPLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS  V  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 189 VGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS----- 261
           E     G+K LQ  LLS+L  + ++     Q       +RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKREQLK 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L  + A +L    AF  + +D 
Sbjct: 309 AIVGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLKWNAFKREKIDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+PLAL+V+G  L G++   WESAM   + IP  EI E+LK+S+D+
Sbjct: 369 SYEDVLNRVVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY--RIR 414
           L + QKNVFLDIAC   G    EV  I  A               KSLI L+ +    + 
Sbjct: 429 LGEEQKNVFLDIACCFRGYKWTEVDDILRALYGNCKKHHIGVLVEKSLIKLNCYGTDTVE 488

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DM REI RK S   PGK  RLW  KDI QV K NTGT  IE I LD +  ++E 
Sbjct: 489 MHDLIQDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNTGTSKIEIICLDSSISDKEE 548

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            +  N  AF KM  L+ L    DK +K      EG     +R LEW + P   L  N   
Sbjct: 549 TVEWNENAFMKMENLKILIIRNDKFSKGPNYFPEG-----LRVLEWHRYPSNCLPSNFHP 603

Query: 530 EKLVSLKMP--CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEY 585
             LV  K+P  C    +        PS      T + F+  +CK L ++PD  +L NL  
Sbjct: 604 NNLVICKLPDSCMTSFEFHG-----PSKKFGHLTVLKFD--NCKFLTQIPDVSDLPNLRE 656

Query: 586 LTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L+ +   ++  + +S+G L+ +K+L     S L+  P    +L+ L  L +S C  L+  
Sbjct: 657 LSFEECESLVAVDDSIGFLNKLKKLSAYGCSKLKSFPP--LNLTSLQTLELSQCSSLEYF 714

Query: 645 PEL 647
           PE+
Sbjct: 715 PEI 717



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 57/139 (41%), Gaps = 32/139 (23%)

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
           V  L LS N N   +PE  + L  L  L +S CE LQ +  LP NL    ARNC      
Sbjct: 826 VGHLNLSGN-NFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDARNC------ 878

Query: 666 PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
            A L+S S  + +N                        L+E  G   +  F G  IP+WF
Sbjct: 879 -ASLTSSSKNMLLN----------------------QKLHEAGGT--NFMFTGTSIPEWF 913

Query: 726 RHQSMGSSATLKTRPPRPA 744
             QS G S++   R   PA
Sbjct: 914 DQQSSGPSSSFWFRNKFPA 932


>gi|356502323|ref|XP_003519969.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 271/762 (35%), Positives = 395/762 (51%), Gaps = 126/762 (16%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGEDTR  FT +L++ L  K + TFIDD+ L RG+ I+ +LL  I+ S IAI
Sbjct: 17  IYDVFLSFRGEDTRQKFTGNLYNSLCEKGVHTFIDDEGLRRGEEITPALLNAIQNSRIAI 76

Query: 60  IIFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           ++FS+ YASS +                       FY VDPSHVR Q  ++    ++  +
Sbjct: 77  VVFSKNYASSTFCLDKLVKILECLKEEKGRSVFPIFYDVDPSHVRHQKGTYSEALAKHEE 136

Query: 98  RFPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           RFP+   K+++W+ AL EAA+LSG+       E K I +I  +V KR+           +
Sbjct: 137 RFPDDSDKVQKWRKALYEAANLSGWHFQHGELEYKSIRKIVKEVYKRISCIPLHIADNPI 196

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G+E ++ E++SLL  GS+ V  + I+GIGGI K TI+ AV+N I   FEG+ F L++RE 
Sbjct: 197 GLEHAVLEVKSLLGHGSD-VNIIGIYGIGGIGKTTISRAVYNLICSQFEGTCFLLDIREK 255

Query: 214 AEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT------- 260
           A    G+  LQ+ LLSE+ K  ++      R I     RL +KKV +V DDV        
Sbjct: 256 AINKQGLVQLQEMLLSEVLKKKHIKVGDVNRGIPIIKRRLEKKKVLLVLDDVDKLEQLKV 315

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    +GS +IITTRDK +L      K Y +K L  A A +LF   AF     D  
Sbjct: 316 LAGESRWFGNGSIIIITTRDKHLLATHGVVKIYDVKPLNVAKALELFNWCAFKNHKADPL 375

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKE-----------VW------ESAMRKLEI 354
           ++ + ++A+ YA G+PLAL+V+G +L G+S             +W       SA+ K E 
Sbjct: 376 YVNIANRAVSYACGIPLALEVIGSHLFGKSLNECNSALEGEPCLWAMGYECNSALDKYER 435

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------S 401
           IPH +I E+LK+SYD L++++K +FLDIACF        V S+  A              
Sbjct: 436 IPHEKIHEILKVSYDGLEENEKQIFLDIACFFNTCGVGYVTSVLRAHGFHVKDGLRVLVD 495

Query: 402 KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIE 461
           +SL+ +D    +RMHDL+RD GREIVR+ES   PG+R+RLW  +DI  VL++NTGT+ IE
Sbjct: 496 RSLLKIDASGCVRMHDLIRDTGREIVRQESTVEPGRRSRLWFEEDIVHVLEENTGTDKIE 555

Query: 462 GISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP 521
            I L+    N ++  N  A  +M  LR L     +N    +  E +P   +R L+W   P
Sbjct: 556 FIKLEGYN-NIQVQWNGKALKEMKNLRILII---ENTTFSTGPEHLP-NSLRVLDWSCYP 610

Query: 522 LKTL--NICAEKLVSLKMP--CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
             +L  +   +++  L MP  C ++ Q ++           F++     I DC+ L  LP
Sbjct: 611 SPSLPADFNPKRVELLLMPESCLQIFQPYN----------MFESLSVLSIEDCQFLTDLP 660

Query: 578 DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
                         ++RE+P        +  L + N +NL +I  SI  L KL  L    
Sbjct: 661 --------------SLREVP-------LLAYLCIDNCTNLVKIDGSIGFLDKLQLLSAKR 699

Query: 638 CERLQTLPELPC----NLGLLSARNCTSLEKLPAGLSSMSSV 675
           C +L+ L   PC    +L +L  R CT L+  P  L  M ++
Sbjct: 700 CSKLKILA--PCVMLPSLEILDLRGCTCLDSFPEVLGKMENI 739


>gi|357469529|ref|XP_003605049.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506104|gb|AES87246.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1352

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 268/749 (35%), Positives = 384/749 (51%), Gaps = 105/749 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRG  TR +FT HL+  L    I  F D+  L  GD I  SLL  IEAS I+I+
Sbjct: 11  HDVFLSFRGR-TRYSFTDHLYRSLLRHGINVFRDNPNLNIGDEIRLSLLQAIEASRISIV 69

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +  + YASS W                       FY+V+ S VR Q  S+     +  KR
Sbjct: 70  VLCKDYASSTWCLDELVKIVDCYYEMKGKTVFVIFYKVEASDVRHQRKSYEIAMIQHEKR 129

Query: 99  F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F    EK+K+W++AL     LSG        ES+ IE+I  D+  +L  T   + K LVG
Sbjct: 130 FGKESEKVKKWRSALKRVCALSGLYYKDDIYESEFIEKIVRDISAKLPPT-PLQIKHLVG 188

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++   E+++SL+ I S+ VC L I+G GGI K T A  ++NKI R FE + F  NVRE  
Sbjct: 189 LDSRFEQVKSLINIDSDVVCMLGIYGAGGIGKTTFALDIYNKIRRRFEAACFLGNVREKS 248

Query: 215 -EETGGIKDLQKKLLSELSKD-----GNMRNIESQLNR-LARKKVRIVFDDVTS------ 261
            E T G++DLQ+ LLSE+ ++     G+     S++ R LARK+V ++ DDV S      
Sbjct: 249 NENTRGLEDLQRTLLSEMGEETQTMMGSTYRGSSEIKRRLARKRVLLILDDVDSVKQLKS 308

Query: 262 ----------GSRVIITTRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     GSR+I+TTRD  VL K+    K Y+++EL   ++ +LFC +AF       
Sbjct: 309 LAGGHDWFGSGSRIIVTTRDIDVLHKHDVKIKTYKLEELNNHESIELFCMYAFNMSRPAE 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           +  +++ +AI YAQG+PL L V+G  L G+S   W   ++K   +P  EI+ VL+ISY  
Sbjct: 369 NFAKISTQAISYAQGIPLVLTVIGSNLKGKSIHEWHIELQKYRKVPDAEIQSVLEISYKG 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA-----------SKSLINLDLFYRIRMHDLL 419
           L D  + VFLDIACF +GE  D V  I DA           SK L+ +D    + MHDL+
Sbjct: 429 LSDLDQKVFLDIACFFKGERWDYVKRILDACGFYPVIRVFVSKCLLIVDENGCLEMHDLI 488

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +DMGREI+RKES ++PG+R+RLW HKD   VLK N G+ A+EGI L   K  +  H +  
Sbjct: 489 QDMGREIIRKESTSNPGERSRLWSHKDALDVLKGNLGSTAVEGIMLHPPKQEKVDHWDDA 548

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           AF KM  LR L     +N    S    +P + +R L+W   P K    N    K+V  K 
Sbjct: 549 AFKKMKNLRILIV---RNTVFSSGPSYLPNS-LRLLDWKCYPSKDFPPNFYPYKIVDFK- 603

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK-GTTIREL 596
                         LP S    K P  F+I             E+L ++ +    +I ++
Sbjct: 604 --------------LPHSSMILKKP--FQI------------FEDLTFINLSYSQSITQI 635

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT-LPE--LPCNLGL 653
           P +L   + ++   L N   L    +S+  +  L +L  S C  L++ +P+  LP +L +
Sbjct: 636 P-NLSGATKLRVFTLDNCHKLVMFDKSVGFMPNLVYLSASGCTELKSFVPKMYLP-SLQV 693

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           +S   C   E  P  +  M   L +++ N
Sbjct: 694 ISFNFCKKFEHFPHVIQKMDRPLKIHMIN 722


>gi|356532660|ref|XP_003534889.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1036

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 279/840 (33%), Positives = 416/840 (49%), Gaps = 156/840 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D R  F SHL      K I  F+DD+L RG+ I  SL+  I+ S I++II
Sbjct: 11  YDVFVSFRGVDIRRGFLSHLIGTFKSKQINAFVDDKLERGEEIWPSLIEAIQGSSISLII 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YASSRW                      FY ++P+ VR Q  S+   F+   K++ 
Sbjct: 71  FSPDYASSRWCLEELVTILECKEKYGQIVIPIFYHIEPTEVRHQRGSYENAFAEHVKKYK 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            K++ W++A+ ++ DLSG +S+  + + +L++EI   VLKRL     + +KGLVG++  I
Sbjct: 131 SKVQIWRHAMNKSVDLSGIESSKFQDDDELLKEIVKLVLKRLGKHLVN-SKGLVGIDKKI 189

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
            +IESL+   S+    + IWG+GGI K T+   VFNK+   ++GSYF  N RE     GI
Sbjct: 190 ADIESLIRKESKDTRLIGIWGMGGIGKTTLPQEVFNKLQSEYQGSYFLANEREQSSKDGI 249

Query: 221 KDLQKKLLSELSKDGNMRNIESQL----NRLARKKVRIVFDDVT---------------- 260
             L+K++ +EL   G++  I++      + + R KV IV DDV                 
Sbjct: 250 ISLKKEIFTELL--GHVVKIDTPNSLPNDTIRRMKVLIVLDDVNDSDHLEKLLGTLDHFG 307

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
           +GSR++ITTRD+QVL    A++ YR++E  +  A +LF   AF      + + EL+ + +
Sbjct: 308 AGSRILITTRDEQVLNANKADEIYRLREFNFDKAFELFKLNAFNQSDNQSEYDELSQRVV 367

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YA+G+PL LKVL   L G++KEVWES + KLE +P  E+ +++K+SY  LD  ++ +FL
Sbjct: 368 NYAKGIPLVLKVLARLLRGKNKEVWESELDKLEKMPLREVCDIMKLSYVDLDRKEQQIFL 427

Query: 381 DIACFL-----------------EGEHRDEVISIFD--ASKSLINLDLFYRIRMHDLLRD 421
           D+ACF                  + E  + V+   +    K+LI       I +HD L++
Sbjct: 428 DLACFFLRSQTKITIDYLNSLLKDSESDNSVVVGLERLKDKALITFLENNFISIHDSLQE 487

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           M  EIVR+ES   PG R+RLW   DIY+ LK   G EAI  I L +    +E +++   F
Sbjct: 488 MACEIVRQESTGDPGSRSRLWDLDDIYEALKNYKGNEAIRSILLHLPTTKKE-NLSPRLF 546

Query: 482 SKMPKLRFLRFYGDKNKCMVSHL----------------------EGVPF--AEVRHLEW 517
           +KM +LRFL    + N   +  L                      +G+ F   E+R L W
Sbjct: 547 AKMNRLRFLEVSVEDNYDCLDQLHILGTNLCWPKQQKTRIVDILAKGLKFLATELRFLSW 606

Query: 518 PQCPLKTLN--ICAEKLVSLKMPCTKVEQLWDDVQRL----------------------P 553
                K+L      EKLV LK+P + +E+LW  V+ L                       
Sbjct: 607 KSYSGKSLPEIFSTEKLVILKLPYSGMEKLWLGVKNLVNLKELDLRCSKKLKELPDISKA 666

Query: 554 SSL-------CTFKTPITFEIIDCKMLERLP------------------------DELEN 582
           ++L       C+  T +   I     LERL                         D  +N
Sbjct: 667 TNLEVILLRGCSMLTNVHPSIFSLPKLERLNLSDCESLNILTSNSHLRSLSYLDLDFCKN 726

Query: 583 LEYLTVKGTTIRE----------LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           L+  +V    ++E          LP S G  S +K L L   S ++R+P S  +L++L  
Sbjct: 727 LKKFSVVSKNMKELRLGCTKVKALPSSFGHQSKLKLLHL-KGSAIKRLPSSFNNLTQLLH 785

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           L +S+C +L+T+ ELP  L  L+A+ CT L+ LP  L  +   L V  C  L+  P ELS
Sbjct: 786 LELSNCSKLETIEELPPFLETLNAQYCTCLQTLPE-LPKLLKTLNVKECKSLQSLP-ELS 843



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 106/279 (37%), Gaps = 78/279 (27%)

Query: 522 LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE 581
           LK  ++ ++ +  L++ CTKV       + LPSS                          
Sbjct: 727 LKKFSVVSKNMKELRLGCTKV-------KALPSSF---------------------GHQS 758

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            L+ L +KG+ I+ LP S   L+ +  L LSN S LE I E    L  L      +C  L
Sbjct: 759 KLKLLHLKGSAIKRLPSSFNNLTQLLHLELSNCSKLETIEELPPFLETLN---AQYCTCL 815

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPA-----------GLSSMSSVLY------------- 677
           QTLPELP  L  L+ + C SL+ LP               S+ +VL+             
Sbjct: 816 QTLPELPKLLKTLNVKECKSLQSLPELSPSLEILNARDCESLMTVLFPSTAVEQLKENRK 875

Query: 678 -VNLCNFLKLDPNELSEIVKDGWM---------------KHSLYEERGIKKSMYFPGNEI 721
            V   N L LD + L  I  +  +               +H        +    +PG+ +
Sbjct: 876 QVMFWNCLNLDEHSLVAIGLNAQINMMKFANHHLSTPNREHVENYNDSFQVVYMYPGSSV 935

Query: 722 PKWFRHQSMGSSAT--LKTRPPRPAGYNKLISFAFCAVV 758
           P W  +++     T  L + PP P       SF FC V+
Sbjct: 936 PGWLEYKTRNYHITIDLSSAPPSPQR-----SFVFCFVL 969


>gi|357487993|ref|XP_003614284.1| TMV resistance protein N [Medicago truncatula]
 gi|355515619|gb|AES97242.1| TMV resistance protein N [Medicago truncatula]
          Length = 1047

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 244/757 (32%), Positives = 397/757 (52%), Gaps = 94/757 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+   SHL+  L    + TF+DDQ L +G+ +  +L   IE S I I+
Sbjct: 12  YDVFISFRGEDTRNTIVSHLYAALQNSGVYTFLDDQKLTKGEVLGPALRKAIEESKIFIV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKR 98
           + S  YA S W                      FY V+PS VRKQS  FG+       KR
Sbjct: 72  VLSPDYAGSSWCLRELVHIMDCHESYGRIVLPVFYGVEPSEVRKQSGDFGKALKLTATKR 131

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             + +  WK ALT+  +L+G+D N+ R E +L+E I  D+L++LD +  S  +  +G+E 
Sbjct: 132 EDQLLSMWKTALTKVGNLAGWDYNIFRNEGELVELIVEDILRKLDISLLSITEFPIGLES 191

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREA--E 215
            +++I  ++   S  VC + IWG+GG+ K T A A++N+I R F+G + F  ++RE    
Sbjct: 192 HVQQITKIIDDQSCKVCIIGIWGMGGLGKTTTAKALYNQIHRRFQGRTSFLESIREVCDN 251

Query: 216 ETGGI-----------KDLQKKLLS-ELSKDGNMRNIESQLNRLARKKVRIVFDDVT--- 260
            +GG+            ++++K+ S  L K   M        RL R+KV +V DDVT   
Sbjct: 252 NSGGVITLQEQLLLDLLEIKQKIHSIALGKTKIM-------TRLQRQKVLVVLDDVTKSE 304

Query: 261 -------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                        SGS +IITTRD ++LK+   +  Y M E+    + +LF   AF   +
Sbjct: 305 QLKALCANPKLLGSGSVLIITTRDLRLLKSFKVDHVYTMTEMDKHQSLELFSCHAFQQPN 364

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
                 EL+   + Y +G+PLAL+VLGCYL  R+++ W  A++ LE IP+ +++++L+IS
Sbjct: 365 PRDKFSELSRNVVAYCKGLPLALEVLGCYLSERTEKEWRDALQILEKIPNNDVQQILRIS 424

Query: 368 YDSLDD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRI 413
           YD L+D +++++FLDI CF  G++R +V  I +               +SL+ ++    +
Sbjct: 425 YDGLEDYTKQDIFLDICCFFIGKNRADVTEILNGCGLHADIGISILIERSLVKVEKNNTL 484

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDLLRDMGR I  + SI  P K +RLW H D+  VL K  GTE +EG+  ++   +R 
Sbjct: 485 GMHDLLRDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPITHR- 543

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--K 531
               + AF  M KLR L+  G     ++    G+   ++R ++W +   K +   ++   
Sbjct: 544 TRFGTNAFQDMKKLRLLKLDGVD---LIGDY-GLISKQLRWVDWQRPTFKCIPDDSDLGN 599

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT-V 588
           LV  ++  + + Q+W +    P  L   K      +   K L+  PD  +L NLE L  +
Sbjct: 600 LVVFELKHSNIGQVWQE----PKLLDKLK---ILNVSHNKYLKITPDFSKLPNLEKLIMM 652

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           +  ++ E+ +S+G L  +  + L +  +L  +P  I  L  +  L +S C +++ L E  
Sbjct: 653 ECPSLIEVHQSIGDLKNIVLINLRDCKSLANLPREIYQLISVKTLILSGCSKIEKLEEDI 712

Query: 649 CNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNF 683
             +  L+A     T ++++P  ++   S+ Y++LC +
Sbjct: 713 MQMESLTALIAANTGIKQVPYSIARSKSIGYISLCGY 749


>gi|356560721|ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 254/777 (32%), Positives = 399/777 (51%), Gaps = 88/777 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRG DTR NF SHL++ LS   + TF D++ L++G  + + L   IE S IAI
Sbjct: 13  IYDVFINFRGGDTRRNFVSHLYYALSNAGVNTFFDEENLLKGMQLEE-LSRAIEGSQIAI 71

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRK 97
           ++FSE Y  S W                      FY VDPS VR  +  FG    +  +K
Sbjct: 72  VVFSETYTESSWCLSELEKIVECHETYGQTIVPIFYDVDPSVVRHPTGHFGDALEAAAQK 131

Query: 98  RFPEK-----MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           ++  K       RWK AL +AA+ SG+D    R ++KL+++I  D+L +LD    S  + 
Sbjct: 132 KYSAKDREYGFSRWKIALAKAANFSGWDVKNHRNKAKLVKKIVEDILTKLDYALLSITEF 191

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            +G+E  ++E+  ++   S  VC + IWG+GG  K TIA A++N+I R F    F  N+R
Sbjct: 192 PIGLEPRVQEVIGVIENQSTKVCIIGIWGMGGSGKTTIAKAIYNQIHRRFMDKSFIENIR 251

Query: 213 EAEETGGIK--DLQKKLLSELSKDG-NMRNIESQLN----RLARKKVRIVFDDVT----- 260
           E  ET G     LQ++LLS++ K    +R+I         RL+ K+  IV DDV      
Sbjct: 252 EVCETDGRGHVHLQEQLLSDVLKTKEKVRSIGMGTTMIDKRLSGKRTFIVLDDVNEFGQL 311

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GS +IITTRD+++L     +  Y + ++   ++ +LF   AF      
Sbjct: 312 KNLCGNRKWFGQGSVIIITTRDRRLLDQLKVDYVYDVDKMDENESLELFSWHAFNEAKPK 371

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
               EL    + Y  G+PLAL+VLG YL  R K+ WES + KLE IP+ +++E L+IS+D
Sbjct: 372 EDFNELARNVVAYCGGLPLALEVLGSYLNERRKKDWESVLSKLERIPNDQVQEKLRISFD 431

Query: 370 SLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
            L D  +K++FLDI CF  G+ R  +  I                 +SL+ ++   ++ M
Sbjct: 432 GLSDHMEKDIFLDICCFFIGKDRAYITEILKGCGLHADIGITVLIDRSLLKVEKNNKLGM 491

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LLRDMGREI+ + S   PGKR+RLW H+D+  VL  NTGT AIEG++L ++   R+  
Sbjct: 492 HQLLRDMGREIICESSRKEPGKRSRLWFHEDVLDVLTNNTGTVAIEGLALKLHFAGRDC- 550

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
            N+YAF +M +LR L+     +   ++   G    ++R + W   P K +  N   E ++
Sbjct: 551 FNAYAFEEMKRLRLLQL----DHVQLTGDYGYLSKQLRWISWQGFPSKYIPNNFYLEGVI 606

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
           ++ +  + +   W + Q L       K      +   K L   P+  +L NLE L +K  
Sbjct: 607 AMDLKHSNLRLFWKEPQVL-------KWLKILNLSHSKYLTETPNFSKLPNLEKLILKDC 659

Query: 592 T-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
             + ++ +S+G L  +  + L +   L  +P  +  L  +  L +S C ++  L E    
Sbjct: 660 PRLCKVHKSIGDLCNLHLINLKDCKTLGNLPRGVYKLKSVKTLILSGCSKIDKLEEDIVQ 719

Query: 650 --NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
             +L  L A N T+L+++P  + +  S+ Y++LC +     N    I++  WM  +L
Sbjct: 720 MESLTTLIAEN-TALKQVPFSIVNSKSIGYISLCGYEGFARNVFPSIIR-SWMSPTL 774


>gi|82542047|gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 264/786 (33%), Positives = 407/786 (51%), Gaps = 95/786 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS  LL  I+ S ++I+
Sbjct: 52  YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAIQESKMSIV 111

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  +R
Sbjct: 112 VFSKGYASSRWCLKELVEILKCKNGKTGQIALPIFYDIDPSDVRKQTGSFAEAFVKHEER 171

Query: 99  FPEK--MKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
           F EK  +K W+ AL EA +LSG++ N +    E+K I+EI  DVL +LD  +    + LV
Sbjct: 172 FEEKYLVKEWRKALEEAGNLSGWNLNDMANGHEAKFIKEIIKDVLNKLDPKYLYVPEHLV 231

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G++     I   L   ++ V  + + G+ GI K TIA  VFN++   FEGS F  ++ E 
Sbjct: 232 GMDRLAHNIFDFLSTATDDVRIVGVHGMPGIGKTTIAQVVFNQLCHGFEGSCFLSDINER 291

Query: 214 AEETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVTSG----- 262
           +++  G+   QK+LL ++ K    N   ++        RL RK+V +V DD+        
Sbjct: 292 SKQVNGLVPFQKQLLHDILKQDVANFDCVDRGKVLIKERLRRKRVLVVADDMAHPDQLNA 351

Query: 263 -----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      SR+IITTR   +L+   A++ Y++KEL   +A +LF   AF        
Sbjct: 352 LMGDRSWFGPRSRLIITTRYSSLLRE--ADQTYQIKELEPDEALQLFSWHAFKDTKPAED 409

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +IEL+ KA+ Y  G+PLAL+V+G  L G+ K  WES +  L  IP   I+  L IS+D+L
Sbjct: 410 YIELSKKAVDYCGGLPLALEVIGALLYGKEKHRWESEIDNLSRIPESNIQGKLLISFDAL 469

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
           D   +N FLDIACF     ++ V  +  A               +SL+ +     + MHD
Sbjct: 470 DGELRNAFLDIACFFIDVEKEYVAKLLGARCRYNPEVVLETLRERSLVKV-FGDMVTMHD 528

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGRE+V K S   PGKR R+W+ KD + VL++  GT+ +EG++LD+ + +    ++
Sbjct: 529 LLRDMGREVVCKASPKEPGKRTRIWNQKDAWNVLEQQKGTDVVEGLALDV-RASEAKSLS 587

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + +F+KM +L  L+  G       +HL G   +   E+  + W QCP K    +   + L
Sbjct: 588 TGSFAKMKRLNLLQING-------AHLTGSFKLLSKELMWICWLQCPSKYFPSDFTLDNL 640

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-T 591
           V L M  + +++LW   +++ + L       +  +I    L        +LE L +KG +
Sbjct: 641 VVLDMQYSNLKELWKG-KKILNRLKIINLSHSQHLIKTPNLHS-----SSLEKLILKGCS 694

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ ++ +S+G L+ +  L L    +L+ +P+SI ++  L  L IS C +L+ LPE   ++
Sbjct: 695 SLVDVHQSIGNLTSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDM 754

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG------WMKHSLY 705
             L+      +E     LSS+  + YV   +    +    S ++  G      W+  S +
Sbjct: 755 ESLTKLLADGIEN-EQFLSSIGQLKYVRRLSLRGYNSAPSSSLISAGVLNWKRWLPTS-F 812

Query: 706 EERGIK 711
           E R +K
Sbjct: 813 EWRSVK 818



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 65/179 (36%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWV-- 606
           LP S+   K+  T  I  C  LE+LP+ + ++E LT     G    +   S+G+L +V  
Sbjct: 723 LPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKLLADGIENEQFLSSIGQLKYVRR 782

Query: 607 -----------------------------------KRLILSNNSNLER------------ 619
                                              K L LSN S  +R            
Sbjct: 783 LSLRGYNSAPSSSLISAGVLNWKRWLPTSFEWRSVKSLKLSNGSLSDRATNCVDFRGLFA 842

Query: 620 -------------IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
                        +P  I  L KL FL +  C+ L ++P+LP +L  L A +C SLE++
Sbjct: 843 LEELDLSGNKFSSLPSGIGFLPKLGFLSVRACKYLVSIPDLPSSLRCLGASSCKSLERV 901


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 278/774 (35%), Positives = 405/774 (52%), Gaps = 105/774 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR+NFT HL   L    I TF DDQL RG+ I   LL TIE S I+I++
Sbjct: 21  FDVFLSFRGEDTRNNFTDHLFVNLHRMGINTFRDDQLERGEEIKSELLKTIEESRISIVV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA S+W                      FY VDPS VRKQ+ SFG  FS   +   
Sbjct: 81  FSKDYAQSKWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVD 140

Query: 101 EK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVEC 158
           EK ++RWK++LT+A++LSGF  N    ESK I+EI + + KR +++T    N  +VG++ 
Sbjct: 141 EKKVQRWKDSLTKASNLSGFHVND-GYESKHIKEIVSKIFKRSMNSTLLPINDDIVGMDF 199

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
            ++E++SLL   S  +  + I+G GGI K TIA  V+N+I   F  + F  +VRE   + 
Sbjct: 200 HLKELKSLLSSDSHDISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVRETFNKR 259

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVTS------------ 261
             ++  Q+ L   +  D   RNI   ++    RL+ KKV IV DDV              
Sbjct: 260 CQLQLQQQLLHDTVGDDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVAGSPK 319

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS +IITTR++ +L    A   Y    L Y +A +LF + AF  +     +++L++
Sbjct: 320 WFGPGSTIIITTRNRHLLVEYEATISYEATGLHYREALQLFSRHAFKQNDPKEDYVDLSN 379

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             ++YAQG+PLALKVLG  L G + E WESA+ KL+   + +I +VL+IS D LD SQK 
Sbjct: 380 CMVQYAQGLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDVLRISLDGLDYSQKE 439

Query: 378 VFLDIACFLEGEHRDEVISIFDASK--SLINLDLFYR----------IRMHDLLRDMGRE 425
           VFLDIACF +GE  D V  I    K    IN+   +           I+MHDL+++MG  
Sbjct: 440 VFLDIACFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQEMGYA 499

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+E    P K +RLW   DIY    +  G E I+ ISLD+++ ++EI  +    +++ 
Sbjct: 500 IVREECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSR-SKEIQFS----TEVC 554

Query: 486 KLRFL--RFYGD----------------KNKCMVSHLEGVPFAEVRHL----EWPQCP-L 522
            LR L   F G+                K    +  L+G+  +  + L    E+   P L
Sbjct: 555 TLRSLPSSFCGEQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNL 614

Query: 523 KTLNI-CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID------CKMLER 575
           + LN+     L  L      ++QL     R    L +F T + FE ++      C+ L++
Sbjct: 615 ERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLKK 674

Query: 576 LPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           +P  L N   L+ L + G+ I+ELP+S+G L  ++ L LSN S  E+ PE   ++  L  
Sbjct: 675 IPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNMKCLKR 734

Query: 633 LFISHCERLQTLPELPCNLG------LLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           L +        + ELP ++G      LLS R C+  EK     ++M  +L +NL
Sbjct: 735 LSLDE----TAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNL 784



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 29/191 (15%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPESLGRLSW 605
            ++ LP S+   ++ +  ++ +C   E+  +   N+++L V   K TTI+ELP S+G L  
Sbjct: 883  IKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQD 942

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL----GL--LSARNC 659
            ++ L L   SNLER+PE  + +  L  L ++       +  LPC++    GL  L+  NC
Sbjct: 943  LEILDLDGCSNLERLPEIQKDMGNLRALSLAG----TAIKGLPCSIRYFTGLHHLTLENC 998

Query: 660  TSLEKLP--AGLSSMSSVLYVNLCNFLKLDPNELSEIVKD-GWMKHSLYEERGIKKSMYF 716
             +L  LP   GL S+  +  +   N         SEI +D   +K  L  E GI      
Sbjct: 999  RNLRSLPDICGLKSLKGLFIIGCSNL-----EAFSEITEDMEQLKRLLLRETGI------ 1047

Query: 717  PGNEIPKWFRH 727
               E+P    H
Sbjct: 1048 --TELPSSIEH 1056



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 29/187 (15%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK----GTTIRE--LPESLGRLSW 605
            LP S+ +        + +C  L  LPD L  L    +K    G  + E  +P  L  LS 
Sbjct: 1074 LPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCLSS 1133

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            ++ L +S N ++  IP  I  L KL  L ++HC  L+ + ELP +L  + AR C  LE  
Sbjct: 1134 LESLYVSEN-HIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGCPCLET- 1191

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKW 724
                 + SS L+ +L  + K              ++ + +  R        PG+  IP+W
Sbjct: 1192 ----ETFSSPLWSSLLKYFK------------SAIQSTFFGPR----RFVIPGSSGIPEW 1231

Query: 725  FRHQSMG 731
              HQ +G
Sbjct: 1232 VSHQRIG 1238



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 100/267 (37%), Gaps = 87/267 (32%)

Query: 528  CAEKLVSLKMP-CTKVEQL----WD------------DVQRLPSSLCTFKTPITFEIIDC 570
            C E L+ L +  C+K E+     W+             ++ LP+S+   +     ++  C
Sbjct: 892  CLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGC 951

Query: 571  KMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE----- 622
              LERLP+   ++ NL  L++ GT I+ LP S+   + +  L L N  NL  +P+     
Sbjct: 952  SNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLPDICGLK 1011

Query: 623  -----------------------------------------SIRHLSKLTFLFISHCERL 641
                                                     SI HL  L  L + +C+ L
Sbjct: 1012 SLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNL 1071

Query: 642  QTLP----ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY---VNLCNFLKLDPNELSEI 694
              LP     L C L +L  RNCT L  LP  L  +   L    +  CN ++       EI
Sbjct: 1072 VALPISIGSLTC-LTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLME------GEI 1124

Query: 695  VKDGWMKHSLYEERGIKKSMYFPGNEI 721
              D W   SL       +S+Y   N I
Sbjct: 1125 PSDLWCLSSL-------ESLYVSENHI 1144



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 13/141 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+ +  +     +  C   E+  D   N   L+ L ++ + I+ELP S+G L  
Sbjct: 836 IKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLES 895

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
           + +L LSN S  E+  E   ++  L  L++ H     T+ ELP ++G      +L    C
Sbjct: 896 LLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKH----TTIKELPNSIGCLQDLEILDLDGC 951

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
           ++LE+LP     M ++  ++L
Sbjct: 952 SNLERLPEIQKDMGNLRALSL 972



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+ +  +     +  C   E+  D   N+     L ++ + I+ELP S+G L +
Sbjct: 742 IKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEF 801

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
           + +L LS  S  E+ PE   ++ +L  L +        + ELP ++G      +LS R C
Sbjct: 802 LLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDE----TAIKELPNSIGSVTSLEILSLRKC 857

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
           +  EK     ++M  +  +NL
Sbjct: 858 SKFEKFSDVFTNMRHLQILNL 878


>gi|356570357|ref|XP_003553356.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1119

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 261/746 (34%), Positives = 388/746 (52%), Gaps = 98/746 (13%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIII 61
           DVFLSFRG+DTR +FT +L+  LS + I TFIDD+ L RGD I+ +L   IE S I II+
Sbjct: 17  DVFLSFRGKDTRHSFTGNLYKALSERGINTFIDDKKLPRGDEITSALEKAIEESRIFIIV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YA S +                      FY+VDPS VR  + SFG   +   K+F 
Sbjct: 77  LSENYAWSSFCLNELDYILKFIKGKGLLVLPVFYKVDPSDVRNHTGSFGESLAYHEKKFK 136

Query: 101 -----EKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                EK++ WK AL + A+LSG+    +    E + I+ I   V KR++          
Sbjct: 137 STNNMEKLETWKMALNQVANLSGYHHFKHGEEYEYQFIQRIVELVSKRINRAPLHVADYP 196

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  I+E++ LL +GS+ V  +  I G+GGI K T+A A++N I+ HFE   F  NVR
Sbjct: 197 VGLESRIQEVKMLLDVGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEALCFLENVR 256

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDV--------- 259
           E  +T G++ LQ+ LLSE   +  +  ++  ++    RL +KKV ++ DDV         
Sbjct: 257 ETSKTHGLQYLQRNLLSETVGEDELIGVKQGISIIQHRLQQKKVLLILDDVDKREQLQAL 316

Query: 260 -------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L      + Y + EL    A +L    AF  + ++  +
Sbjct: 317 VGRPDLFCPGSRVIITTRDKQLLACHGVKRTYEVNELNEEYALQLLSWKAFKLEKVNPCY 376

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            ++ ++ + Y+ G+PLAL+V+G  L GR+ E W S + + + IP+ EI+E+LK+SYD+L+
Sbjct: 377 KDVLNRTVTYSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEIQEILKVSYDALE 436

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
           + +++VFLDI+C L+     EV  I  A               KSLI +   Y I +HDL
Sbjct: 437 EDEQSVFLDISCCLKEYDLKEVQDILRAHYGHCMEHHIRVLLEKSLIKISDGY-ITLHDL 495

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR-EIHMN 477
           + DMG+EIVRKES   PGKR+RLW H DI QVL++N GT  IE I  D +     EI  +
Sbjct: 496 IEDMGKEIVRKESPREPGKRSRLWLHTDIIQVLEENKGTSQIEIICTDFSLFEEVEIEWD 555

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           + AF KM  L+ L     KN       + +P   +R LEW + P ++   +   +KL   
Sbjct: 556 ANAFKKMENLKTLII---KNGHFTKGPKHLP-DTLRVLEWWRYPSQSFPSDFRPKKLAIC 611

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
           K+P +    L  ++  L        T + F+   C+ L ++PD              +  
Sbjct: 612 KLPNSGYTSL--ELAVLLKKKFVNLTNLNFD--SCQHLTQIPD--------------VSC 653

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CNLGLL 654
           +P+       +++L   +  NL  I +S+  L KL  L    C RL+  P +   +L  L
Sbjct: 654 VPK-------LEKLSFKDCDNLHAIHQSVGLLEKLRILDAEGCSRLKNFPPIKLTSLEQL 706

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNL 680
               C SLE  P  L  M +++++NL
Sbjct: 707 RLGFCHSLESFPEILGKMENIIHLNL 732



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 41/179 (22%)

Query: 582 NLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           N+++L ++   + +   P +L   + VK L LS N N   IPE I+    LT L +++CE
Sbjct: 809 NVQFLDLRNCNLSDDFFPIALPCFANVKELDLSGN-NFTVIPECIKECRFLTVLCLNYCE 867

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
           RL+ +  +P NL    A  C SL       SS  S+L                       
Sbjct: 868 RLREIRGIPPNLKYFYAEECLSLT------SSCRSML----------------------- 898

Query: 700 MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           +   L+E    +   Y PG +IP+WF  Q+     +   R       NK  + A C ++
Sbjct: 899 LSQELHE--AGRTFFYLPGAKIPEWFDFQTSEFPISFWFR-------NKFPAIAICHII 948


>gi|356560705|ref|XP_003548629.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 248/777 (31%), Positives = 407/777 (52%), Gaps = 87/777 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRGEDTR  F SHLH+ LS   + TFIDD+ L++G  +   L+  IE S I++
Sbjct: 27  LYDVFINFRGEDTRGKFVSHLHYALSKAGVNTFIDDENLLKGMTLKDELMRAIEGSQISL 86

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRK 97
           ++FS+ Y  S W                      FY ++PS VR Q  +FG+   S + K
Sbjct: 87  VVFSKSYTESTWCLDELEKILECRKLHDQIVMPIFYDIEPSVVRHQKGAFGKALKSAVEK 146

Query: 98  RFP-----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
            +      + + RW +AL  AADLSGF     R E+ L++EI  DVL++L        + 
Sbjct: 147 TYSGEHAEQVLWRWSSALNRAADLSGFHVVDRRNEAILVKEIVEDVLRKLVYEDLYVTEF 206

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            VG+E  ++++  L+      VC + IWG+GG+ K + A  ++N+I R F    F  ++R
Sbjct: 207 PVGLESRVQKVIGLINNQFTKVCMIGIWGMGGLGKTSTAKGIYNQIHRKFIDKSFIEDIR 266

Query: 213 EAEETGGIKD--LQKKLLSE-LSKDGNMRNI----ESQLNRLARKKVRIVFDDVT----- 260
           E  +T G     LQKKLLS+ L  + ++ ++     +   RL+ K++ +V DDV      
Sbjct: 267 EICQTEGRGHILLQKKLLSDVLKTEVDILSVGMGKTTIKERLSGKRMLVVLDDVNELGQV 326

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       G+ +IITTRD ++LK    +  Y+++E+   ++ +LF   AFG     
Sbjct: 327 EHLCGNREWFGQGTVIIITTRDVRLLKQLKVDSIYKLEEMDKNESLELFSWHAFGNAEPR 386

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
               EL    + Y  G+PLAL+VLG YL  R K++WES + KLE IP+ ++++ L+IS+D
Sbjct: 387 EDFKELARSVVAYCGGLPLALRVLGAYLIERPKQLWESVLSKLEKIPNDQVQKKLRISFD 446

Query: 370 SLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
            L D  +K++FLD+ CF  G+ R  V  I +               +SLI ++   ++ M
Sbjct: 447 GLSDPLEKDIFLDVCCFFIGKDRGYVTEILNGCGLHADIGITVLLERSLIKVEKNNKLGM 506

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LLRDMGREI+ + S N PGKR+RLW  KD+  VL KNTGTE I G++L ++  +R+  
Sbjct: 507 HPLLRDMGREIICESSRNKPGKRSRLWFQKDVLDVLTKNTGTETIVGLALKLHYSSRDC- 565

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
            N+YAF +M  LR L+     +   ++        ++R + W   P K +  N   E ++
Sbjct: 566 FNAYAFKEMKSLRLLQL----DHVHITGDYQYLSKQLRWVCWQGFPSKYIPNNFNLEGVI 621

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
           ++ +  + +  +W    + P  L   K      +   K L   P+   L +LE L +K  
Sbjct: 622 AIDLKHSNLRLVW----KKPQVLQWLK---ILNLSHSKYLTATPNFSGLPSLEKLILKDC 674

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
            ++ ++ +S+G L  +  + + + ++L  +P  +  L  +  L +S C ++  L E    
Sbjct: 675 PSLSKVHKSIGDLHKLVLINMKDCTSLSNLPREMYQLKSVKTLNLSGCSKIDKLEEDIVQ 734

Query: 650 --NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
             +L  L A N T+++++P  + S+ S+ Y++LC +  L  N    I+   WM  ++
Sbjct: 735 MESLTTLIAEN-TAVKQVPFSIVSLKSIGYISLCGYEGLSRNVFPSIIW-SWMSPTM 789


>gi|449438044|ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 274/865 (31%), Positives = 420/865 (48%), Gaps = 160/865 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL++      I  F DD +L RG++IS  L   IE S +A++
Sbjct: 14  YDVFLSFRGEDTRKNFTDHLYYAFKDAGINVFRDDPELERGEDISSELERAIEGSKVAVV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSERYA S W                      FY VDPS VRKQ   F   F +   R+
Sbjct: 74  VFSERYAESGWCLEELVKIMECRRTLRQLVFPIFYNVDPSCVRKQKGEFEEAFVKHEVRY 133

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
              + R   W+ ALTEAA+LSG+D   I    E+K I  I   V K +++ +       V
Sbjct: 134 FRDIDRVLKWRMALTEAANLSGWDLRNIANGHEAKFIRLIVEKVSKEVNSKYLFIALYPV 193

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+E  ++ + S L IGS  V  + I G+GG+ K T+A A++N++  +FE   F  N++  
Sbjct: 194 GIESRLKLLLSHLHIGSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCFLSNIKA- 252

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIE-------------------------SQLNRL 247
            ET  +  LQK+LLS +  S + N+ NI+                         SQL  L
Sbjct: 253 -ETSNLIHLQKQLLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTAL 311

Query: 248 ARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
           A  +     D   SGSR+IITTRD+ +L     ++   + E+   +A +LF   AF   +
Sbjct: 312 ATTR-----DLFASGSRIIITTRDRHLLNQLEVDEICSIDEMDDDEALELFSWHAFRNSY 366

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              +  +L+ + I Y  G+PLAL+VLG +L GRS+E WE  ++KL+ IP+ +I++ LKIS
Sbjct: 367 PSETFHQLSKQVITYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKKLKIS 426

Query: 368 YDSLDD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRI 413
           +D L+D + K++FLD++CF  G  R+ V  I D               + L+ +    R+
Sbjct: 427 FDGLNDHTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDKNRL 486

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDLLRDMGREIVR+    +P + +RL+ H+++  VL +  GT+A EG+SL + + +++
Sbjct: 487 MMHDLLRDMGREIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQ 546

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
             +++ AF++M KLR L+           H+      E+R + W   PLK L      +K
Sbjct: 547 -KLSTKAFNEMQKLRLLQLNFVDVNGDFKHIS----EEIRWVCWHGFPLKFLPKEFHMDK 601

Query: 532 LVSLKMPCTKVEQLWDDVQ-----------------------RLPS-------------- 554
           LV++ +  +++   W + +                       +LP+              
Sbjct: 602 LVAMDLRYSQIRFFWKESKFLKNLKFLNLGHSHYLTHTPNFSKLPNLEILSLKDCKNLIE 661

Query: 555 ---SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
              ++   K  I+  + DCK L  LP+   NL+ L         +   +G LS ++ L L
Sbjct: 662 LHPTIGELKALISLNLKDCKSLNSLPNSFSNLKSLQTL------IISDIGSLSSLRELDL 715

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
           S N     +P +I  L KL  L + +C  LQ +P LP +L  L A NCTSLE+  + LS+
Sbjct: 716 SENL-FHSLPSTISGLLKLETLLLDNCPELQFIPNLPPHLSSLYASNCTSLER-TSDLSN 773

Query: 672 MSSVLYVNLCNFLKL-----------------------DPNELSEIVKDGWMKHSLYEER 708
           +  +  +++ N  KL                         N   + +  GW         
Sbjct: 774 VKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGF---- 829

Query: 709 GIKKSMYFPGNEIPKWFRHQSMGSS 733
                +  PG E+P WF ++   S+
Sbjct: 830 ---GGVCLPGKEVPDWFAYKDEVST 851


>gi|124361211|gb|ABN09183.1| TIR; AAA ATPase [Medicago truncatula]
          Length = 1474

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 264/772 (34%), Positives = 390/772 (50%), Gaps = 85/772 (11%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
            +YDVFLSFRG DTR  F SHL+  L    I  F  DD++ RGD IS SLL  IE S I+I
Sbjct: 392  IYDVFLSFRGNDTRAKFISHLYTALENAGIYVFRDDDEIQRGDQISASLLQAIEQSKISI 451

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            ++ S  YA SRW                      FY +DPS VR QS  FG  F  L  R
Sbjct: 452  VVLSRSYADSRWCMLELENIMGNSRTQGMVVVPVFYEIDPSEVRNQSGKFGEDFESLLLR 511

Query: 99   FPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                  K+  WK AL E    +G      R ES+ I +I + V    D T        VG
Sbjct: 512  TSVDTLKLSNWKTALAEVGGTAGVVIINSRNESEDIRKIVDHVTNLPDRTDLFVADHPVG 571

Query: 156  VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            V+  ++++  LL    S+    L IWG+GGI K TIA A +NKI   FE   F LNVRE 
Sbjct: 572  VDSRVQDVIQLLNNQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREV 631

Query: 215  -EETGGIKDLQKKLLSELSKDGNMR--NIESQ----LNRLARKKVRIVFDDVT------- 260
             E+  G+  LQ++LLS++ K   ++   +ES       RL  K++ +V DDV        
Sbjct: 632  WEQDNGVVSLQQRLLSDIYKTTKIKIETVESGKMILQERLRHKRIFLVLDDVNKVDQLNA 691

Query: 261  ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR++ITTRD  +L     +  YRMKE+   ++ +LF   AF        
Sbjct: 692  LCGSHEWFGEGSRIMITTRDDDLLSRLKVDYVYRMKEMDGNESLELFSWHAFKQPIPIEG 751

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              +L+   + Y+ G+P+AL+V+G +L  R  K+ W+S + KL++IP+ E+ E LKIS+D 
Sbjct: 752  FGDLSTDVVMYSGGLPIALQVIGSFLLTRRRKKEWKSVLEKLKLIPNDEVLEKLKISFDG 811

Query: 371  L-DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            L DD  K +FLDIA F  G  ++EV +I +               KSL+ +D   +I MH
Sbjct: 812  LSDDDVKEIFLDIAFFFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRKNKIGMH 871

Query: 417  DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            DLLRDMGREIVRK+SI    + +RLW ++D+  VL K T    ++G++L M++++   +M
Sbjct: 872  DLLRDMGREIVRKKSIEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSRMDSRTYM 931

Query: 477  NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             +  F K+ KL+FL+  G + +    +L      ++R L W   PLK        E LV+
Sbjct: 932  ETKDFEKINKLKFLQLAGVQLEGNYKYLS----RDIRWLCWHGFPLKYTPEEFHQEHLVA 987

Query: 535  LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
            + +  + +EQ+W   Q L       K      +     L++ PD   L NLE L +K   
Sbjct: 988  VDLKYSHLEQVWKKSQLL-------KELKFLNLSHSHNLKQTPDFSYLPNLEKLILKDCP 1040

Query: 592  TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELP 648
             +  +  ++G L  +  + L + + L  +P SI  L  +  L +S C ++  L    E  
Sbjct: 1041 NLSSVSPNIGNLKKILLINLKDCTGLCELPRSIYKLKSVKTLIVSGCTKIDKLEEDIEQM 1100

Query: 649  CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
             +L +L A + TS+ ++P  +    S+ +++LC F     N    I++  WM
Sbjct: 1101 TSLTILVA-DKTSVTRVPFAVVRSKSIGFISLCGFEGFARNVFPSIIQ-SWM 1150



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 185/355 (52%), Gaps = 43/355 (12%)

Query: 125 RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCK--LRIWGI 182
           R ES+ I +I + V   LD T        VGV+  ++++  LL  G E      L IWG+
Sbjct: 39  RNESEDITKIVDHVTNLLDRTDFFVVDHPVGVDSRVQDVIQLLN-GQESKDPRLLGIWGM 97

Query: 183 GGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGNMR--N 239
           GGI K TIA A +NKI R FE   F LNVRE  E+  GI  LQ++LLS++ K   ++   
Sbjct: 98  GGIGKTTIAKAAYNKIHRDFEAKSFLLNVREVWEQDNGIVSLQQRLLSDIYKTTKIKIET 157

Query: 240 IESQ----LNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCW 279
           +ES       RL  K++ +V DDV                  GSR+IITTRD  +L    
Sbjct: 158 VESGKMILQERLCHKRIFLVLDDVNKLDQLNALCGSHGWFGEGSRIIITTRDDDLLGRLK 217

Query: 280 ANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCG 339
            +  YRMKE+   ++ +LF    F          +L+   +KY+ G PLAL+V+G +L  
Sbjct: 218 VHYVYRMKEMDSNESLELFSWHVFKQPIPIEGFGDLSTDVVKYSGGSPLALEVIGSFLLT 277

Query: 340 -RSKEVWESAMRKLEIIPHVE-IEEVLKISYDSLDDSQKNVFLDIACF-LEGEHRDEVIS 396
            RSK+ W+S + KL   P V+ I ++L++S+D+L D+ K  FLDIAC  L G   D++I 
Sbjct: 278 RRSKKEWKSILEKL-TKPDVKLIPDMLRLSFDNLSDNIKETFLDIACLNLSGMSLDDLIQ 336

Query: 397 IFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR 438
           IF               + SL+ +D   RI   DLL+ +GREI +++S      R
Sbjct: 337 IFKKDVHFKELGMEELVTISLVQIDSEKRIERDDLLQLLGREIRKEKSTAMAAGR 391


>gi|42568255|ref|NP_198990.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|42570590|ref|NP_851117.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007337|gb|AED94720.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007338|gb|AED94721.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1068

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 295/1012 (29%), Positives = 458/1012 (45%), Gaps = 184/1012 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH V + K I TF D ++ RG  I   L+  I  + ++I++
Sbjct: 13  YQVFSSFHGPDVRKGFLSHLHSVFASKGITTFNDQKIDRGQTIGPELIQGIREARVSIVV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S++YASS W                      FY VDPS V+KQS  FG  F +  +   
Sbjct: 73  LSKKYASSSWCLDELVEILKCKEALGQIVMTVFYEVDPSDVKKQSGVFGEAFEKTCQGKN 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW+NAL   A ++G  S     E+K+I++I  DV  +L+ T     +G+VG+E  
Sbjct: 133 EEVKIRWRNALAHVATIAGEHSLNWDNEAKMIQKIVTDVSDKLNLTPSRDFEGMVGMEAH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           ++ + SLLC+ S+ V  + IWG  GI K TIA  +FNKIS  F    F  N++ + + G 
Sbjct: 193 LKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARTLFNKISSIFPFKCFMENLKGSIKGGA 252

Query: 220 IK----DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT------------- 260
                  LQK+LLSE+ K  NM+  ++ +    L  +KV I+ DDV              
Sbjct: 253 EHYSKLSLQKQLLSEILKQENMKIHHLGTIKQWLHDQKVLIILDDVDDLEQLEVLAEDPS 312

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
              SGSR+I+TT DK +LK       Y +      +A ++ C  AF    +     EL +
Sbjct: 313 WFGSGSRIIVTTEDKNILKAHRIQDIYHVDFPSEEEALEILCLSAFKQSSIPDGFEELAN 372

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           K  +    +PL L V+G  L  +SK  WE  + ++E      I+ +L+I YD L    ++
Sbjct: 373 KVAELCGNLPLGLCVVGASLRRKSKNEWERLLSRIESSLDKNIDNILRIGYDRLSTEDQS 432

Query: 378 VFLDIACFLEGEHRD-----------EVISIFD--ASKSLINLDLFYRIRMHD-LLRDMG 423
           +FL IACF   E  D           +V++ F+  A +SL+ +     + MH  LL+ +G
Sbjct: 433 LFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRISTDGHVVMHHYLLQKLG 492

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           R IV ++  N PGKR  L   ++I  VL K TGTE+++GIS D + +  E+ +   AF  
Sbjct: 493 RRIVHEQWPNEPGKRQFLIEAEEIRDVLTKGTGTESVKGISFDTSNI-EEVSVGKGAFEG 551

Query: 484 MPKLRFLRFYGDKNKC-----MVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
           M  L+FLR Y D         +   +E +P   VR L W   P K+L      E LV ++
Sbjct: 552 MRNLQFLRIYRDSFNSEGTLQIPEDMEYIP--PVRLLHWQNYPRKSLPQRFNPEHLVKIR 609

Query: 537 MPCTKVEQLWDDVQRLPS-----------------------------SLCTFKTPITFEI 567
           MP +K+++LW  +Q LP+                               C     + F I
Sbjct: 610 MPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEFCKSLVELPFSI 669

Query: 568 I-----------DCKM------------LERL-----------PDELENLEYLTVKGTTI 593
           +           +C M            LERL           PD   N++ L +  T I
Sbjct: 670 LNLHKLEILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDISSNIKKLNLGDTMI 729

Query: 594 RELPESLGRLSWVKRLILSN------------------NSNLERIPESIRHLSKLTFLFI 635
            ++P S+G  S +  L + +                   SN+E IPESI  L++L +L +
Sbjct: 730 EDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPESIIGLTRLDWLNV 789

Query: 636 SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
           + C +L+++  LP +L  L A +C SL+++     +    L  N C  L LD     E  
Sbjct: 790 NSCRKLKSILGLPSSLQDLDANDCVSLKRVCFSFHNPIRALSFNNC--LNLD-----EEA 842

Query: 696 KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
           + G ++ S+Y      + +  PG +IP+ F H++ G S T+   P   +  ++  +    
Sbjct: 843 RKGIIQQSVY------RYICLPGKKIPEEFTHKATGRSITIPLSPGTLSASSRFKA---- 892

Query: 756 AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGC 815
           ++++ P         S      G V   CC+         Y + L       S+H+F+  
Sbjct: 893 SILILPVESYETDDISCSLRTKGGVEVHCCELP-------YHFLLRS----RSEHLFI-- 939

Query: 816 NSFGGEYF--GPNYDEFSFRI-HCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
             F G+ F  G  Y E    +   +F F       ++ +CG+  +      D
Sbjct: 940 --FHGDLFPQGNKYHEVDVTMSEITFEFSHTKIGDKIIECGVQIMTEGAEGD 989


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 266/748 (35%), Positives = 396/748 (52%), Gaps = 91/748 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYHELERQGIRTFRDDPQLERGTAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S +YA+S W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPKYATSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           E  K    W++ALT+ A L+G+ S   R E++LI EI   +  ++  +      ++ L G
Sbjct: 139 EGNKEVEGWRDALTKVASLAGWTSEDYRYETQLISEIVQALWSKVHPSLTVFGSSEKLFG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EE++ LL   +  V  + IWG+GGI K T+AG V+ KIS  FE   F  NVRE  
Sbjct: 199 MDSKLEEMDVLLDKEANDVRFIGIWGMGGIGKTTLAGLVYEKISHQFEVCIFLANVREVS 258

Query: 216 ETG-GIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
           +T  G+ DLQK++LS++ K+ N++  N+ S  N + R    K V +V DDV         
Sbjct: 259 KTTHGLVDLQKQILSQILKEENVQVWNVYSGRNMIKRCVCNKAVLLVLDDVDQSEQLENF 318

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTRD++VL      K Y +K +   +A +LF   AF     +  +
Sbjct: 319 VGEKDCFGLRSRIIITTRDRRVLVTHGVEKPYELKGINEHEALQLFSWKAFRKCEPEEDY 378

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL    + YA G+PLALK+LG +L GR+ + W SA+ KL+  P + + ++LK+S+D LD
Sbjct: 379 AELCKSFVTYAGGLPLALKILGSFLKGRTPDEWNSALAKLQQTPDITVFKILKMSFDGLD 438

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF      + +I + D+S             KSL+ +    ++ +HDL+
Sbjct: 439 EMEKKIFLDIACFRRLYSNEFMIELVDSSDPCNRITRRVLAEKSLLTISSDSQVHVHDLI 498

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            +MG EIVR+E+    G R+RL    DI+ V  KNTGTEAIEGI LD+ ++  E   N  
Sbjct: 499 HEMGCEIVRQEN-EESGGRSRLCLRDDIFHVFTKNTGTEAIEGILLDLAEL-EEADWNLE 556

Query: 480 AFSKMPKLRFLRFYGDK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLV 533
           AFSKM KL+ L  +  +     KC+ + L        R L W   P K+L  C   E+L 
Sbjct: 557 AFSKMCKLKLLYIHNLRLSVGPKCLPNAL--------RFLSWSWYPSKSLPPCFQPEELT 608

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L +  + ++ LW+ ++ L          +++ I     L R PD   + NLE L ++G 
Sbjct: 609 ELSLVHSNIDHLWNGIKYLGK---LKSIDLSYSI----NLTRTPDFTGISNLEKLILEGC 661

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           T + ++  S+  L  +K     N  +++R+P  + ++  L    +S C +L+ +PE    
Sbjct: 662 TNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQ 720

Query: 651 LGLLSARNC--TSLEKLPAGLSSMSSVL 676
           +  LS      T++EKLP+ +   S  L
Sbjct: 721 MKRLSKLRLGGTAVEKLPSSIERWSESL 748



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 22/165 (13%)

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS-ARNCTSLEKL--PAGLSS 671
           +N   +P SI  LSKL ++ + +C+RLQ LPEL   +G+LS   NCT+L+    P  L  
Sbjct: 833 NNFVSLPASIHLLSKLEYINVENCKRLQQLPELSA-IGVLSRTDNCTALQLFPDPPDLCR 891

Query: 672 MSSVLYVNLCNFLKLDPNELSE----IVKDGWMKHSLYEERGIKKSM------------- 714
           +++   +N  N L +  N+ +      V   W++  +     +   M             
Sbjct: 892 ITTNFSLNCVNCLSMVCNQDASYFLYAVLKRWIEIQVLSRCDMTVHMQKTHRHPSEYLKV 951

Query: 715 YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             PG+EIP+WF +QS+G S T K  P     Y+K I FA CA++V
Sbjct: 952 VIPGSEIPEWFNNQSVGDSVTEKF-PSDACNYSKWIGFAVCALIV 995


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 287/868 (33%), Positives = 448/868 (51%), Gaps = 118/868 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEAS--CIA 58
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S  C+ 
Sbjct: 20  YDVFLSFRGGDTRKNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRWCLN 79

Query: 59  IIIF-----SERYASSRWFFYRVDPSHVRKQSHSFGRHFS---RLRKRFPEKMKRWKNAL 110
            ++      S++ +     FY VDPS VR Q  SFG   +   R   +  E +++W+ AL
Sbjct: 80  ELVKIIERKSQKESIVLPIFYHVDPSDVRNQRGSFGDALAYHERDANQEKEMIQKWRIAL 139

Query: 111 TEAADLSGFDSN-VIRPES-------KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
            EAA+LSG   N  ++ ES       ++++EI + +++RL+    S  K +VG+   +E+
Sbjct: 140 REAANLSGCHVNDQLKTESLQHWYETEVVKEIVDTIIRRLNHQPLSMGKNIVGIGVHLEK 199

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD 222
           ++SL+      V  + I+GIGG+ K TIA A++N+IS  ++G+ F +N++E  + G I  
Sbjct: 200 LKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGNSFLINIKERSK-GDILQ 258

Query: 223 LQKKLLSELSKDGN---MRNIESQLNRLAR----KKVRIVFDDVT--------------- 260
           LQ++LL  L + GN   + N++  ++ + R     +V ++FDDV                
Sbjct: 259 LQQELLHGLLR-GNFFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWF 317

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
            + S +IIT+RDK VL    A+ +Y + +L   +A +LF  WAF  +     +  L+   
Sbjct: 318 RAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNI 377

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YA G+PLALKVLG  L G+    WESA+ KL+I+PH+EI  VL+IS+D LDD  K +F
Sbjct: 378 IDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGIF 437

Query: 380 LDIACFLEGEHRDEVISIFD--ASKSLINLDLFYRIR-------MHDLLRDMGREIVRKE 430
           LD+ACF +G+ RD V  I    A  ++  LD    I        MHDL++ MG EI+R+E
Sbjct: 438 LDVACFFKGDDRDFVSRILGPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQE 497

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
                G+R+RLW + + Y VL +N+GT+AIEG+ LD  K N    + + +F +M +LR L
Sbjct: 498 CPKDLGRRSRLWDY-NAYHVLIRNSGTKAIEGLFLDRCKFNPS-QLTTESFKEMNRLRLL 555

Query: 491 RFYGDKNKCMV-SHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
           + +  + K  +  HL     F+  E+ +L W   PL++L  N  A+ LV L +  + ++Q
Sbjct: 556 KIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVELLLRNSNIKQ 615

Query: 545 LWDD--------VQRLPSSLCTFKTPITFEIIDCKML---ERLPD---ELENLEYLTVKG 590
           LW          V  L  S+   + P    + + ++L   ER P+    +  L  L + G
Sbjct: 616 LWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEERFPEIKGNMRELRVLDLSG 675

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPC 649
           T I +LP S+  L+ ++ L+L   S L +IP  I HLS L  L + HC  ++  +P   C
Sbjct: 676 TAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSLKVLDLGHCNIMEGGIPSDIC 735

Query: 650 NLGLLSARNCTS--LEKLPAGLSSMSSVLYVNL--CNFLKLDP--------------NEL 691
           +L  L   N        +P  ++ +S +  +NL  C+ L+  P              N +
Sbjct: 736 HLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNLEQIPELPSRLRLLDAHGSNRI 795

Query: 692 SE------------------IVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGS 732
           S                   ++K      S Y  +G    +  PG+  IP+W  H    +
Sbjct: 796 SSRAPFLPLHSLVNCFSWARVLKSTSFSDSSYHGKGT--CIVLPGSAGIPEWIMHWR--N 851

Query: 733 SATLKTRPPRP-AGYNKLISFAFCAVVV 759
              + T  P+     N+ + FA C V V
Sbjct: 852 RCFISTELPQNWHQNNEFLGFAICCVYV 879



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 138/374 (36%), Gaps = 101/374 (27%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT----TIRELPESLGRLS 604
            ++ +PSS+   +   T  +  CK L  LP+ + NL  L   G        + P++LGRL 
Sbjct: 1100 IKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNLGRLR 1159

Query: 605  WVKRLILSNNSNLE---------------------------------------------- 618
             +K L +S+  +++                                              
Sbjct: 1160 SLKSLFISHLDSMDFQLPSLSGLCSLKLLMLHACNLREIPSGIYYLSSLVLLYLGRNHFS 1219

Query: 619  RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
            RIP+ I  L  L  L +SHC+ LQ +PELP +L  L   NCTSLE     LSS S++L+ 
Sbjct: 1220 RIPDGISQLYNLKLLDLSHCKMLQHIPELPSSLMYLDVHNCTSLE----NLSSQSNLLWS 1275

Query: 679  NLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKT 738
            +L    K      S+I            E G+ ++  F    IP+W  HQ  G   T+K 
Sbjct: 1276 SLFKCFK------SQIQG---------REFGLVRT--FIAESIPEWISHQKSGFKITMKL 1318

Query: 739  RPPRPAGYNKLISFAFCAVVVF----PAFLKYFRHKSGEDDWDGNVY-------AVCCDW 787
             P      +  + F  C++ +         + F +K   DD    V          C D 
Sbjct: 1319 -PWSWYENDDFLGFVLCSLYIPLEIETTTRRRFNYKLKFDDDSAYVSYQSFQSCEFCYDG 1377

Query: 788  KRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG 847
               S+G L               ++     F   Y+   +   +   + S       E  
Sbjct: 1378 DALSQGCL---------------IYYPKCRFPKRYYSNEWGTLNASFNAS---ESGTEPV 1419

Query: 848  EVKKCGIHFVYAQD 861
            +  +CG HF+YA D
Sbjct: 1420 KAARCGFHFLYAHD 1433



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+  T     C  LE  P+   ++E+L  L + GTTI+E+P S+  L 
Sbjct: 1052 NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTIKEIPSSISHLR 1111

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             +  L L    NL  +PESI +L+ L  L +  C      P+    L  L +   + L+ 
Sbjct: 1112 GLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNLGRLRSLKSLFISHLDS 1171

Query: 665  LPAGLSSMSS-----VLYVNLCNF 683
            +   L S+S      +L ++ CN 
Sbjct: 1172 MDFQLPSLSGLCSLKLLMLHACNL 1195


>gi|357469181|ref|XP_003604875.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505930|gb|AES87072.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 880

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 385/743 (51%), Gaps = 82/743 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG+D    F SHLH  L    I  F  D++ +GD+IS SLL  I  S I+I+
Sbjct: 6   VYDVFLSFRGDDGSAKFVSHLHSSLQNAGISVFRGDEIQQGDDISISLLRAIRHSRISIV 65

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL--RK 97
           + S  YA+SRW                       Y VDPS VR Q   FG+    L    
Sbjct: 66  VLSINYANSRWCMFELEKIMEIGRTGGLVVVPVLYEVDPSEVRHQEGQFGKALEDLILEI 125

Query: 98  RFPEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              E  K  W+  L +     GF     R ES  I+ I   V + LD T     +  VGV
Sbjct: 126 SVDESTKSNWRRDLIDIGGKDGFIVTDSRNESADIKNIVEHVTRLLDKTDLFVVEYPVGV 185

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              +E++ +LL I  S  V  L IWG+GG+ K T+A A++N+I   FEG  F LN+RE  
Sbjct: 186 RSRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVW 245

Query: 216 ETGGIK-DLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTS------- 261
           ET   +  LQ+++L ++ K   ++  +IES  N    RLA+K+V +V DDV         
Sbjct: 246 ETDTNQVSLQQQILCDVYKTTELKILDIESGKNLLKERLAQKRVLLVLDDVNKLDQLKAL 305

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD ++L++C  +  Y + E+   ++ +LFC  AF         
Sbjct: 306 CGSRKWFGPGSRVIITTRDMRLLRSCRVDLVYTVVEMDERESLELFCWHAFKQPCPPEGF 365

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
              +   I Y+ G+PLAL+VLG YL G     W+  + KL+ IPH ++++ LK+S+D L 
Sbjct: 366 ATHSRDVIVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKKLKVSFDGLK 425

Query: 373 D-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           D ++K +F DIACF  G  ++++I I +               +SL+ +D+  ++RMHDL
Sbjct: 426 DVTEKQIFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDL 485

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           LRDMGR+IV +ES  HP  R+RLW  ++++ +L  + GTEA++G++L+     RE+ + +
Sbjct: 486 LRDMGRQIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALEF---PREVCLET 542

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE----KLVS 534
            +F KM KLR LR  G K K    +L G    +++ L W   P     + AE     LV 
Sbjct: 543 KSFKKMNKLRLLRLAGVKLKGDFKYLSG----DLKWLYWHGFP--ETYVPAEFQLGSLVV 596

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTI 593
           +++  +K++Q+W+  Q L  +L       + ++ +      +P    NLE L ++   ++
Sbjct: 597 MELKYSKLKQIWNKSQML-ENLKVLNLSHSLDLTETPDFSYMP----NLEKLILEDCPSL 651

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             +  S+G L  +  + L++ + L  +P+SI  L  L  L +S C  L  L +L     L
Sbjct: 652 STVSHSIGSLHKILLINLTDCTGLRTLPKSIYKLKSLATLILSGCSMLDKLEDLEQMESL 711

Query: 654 LS-ARNCTSLEKLPAGLSSMSSV 675
            +   + T++ ++P+ L  M  V
Sbjct: 712 TTLIADKTAIPEVPSSLPKMYDV 734



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRGED R  F SHLH  L    I  F DD  I RGD IS SL   IE S I+I
Sbjct: 731 MYDVFLSFRGEDNRPRFISHLHSSLHSAGIYAFKDDDGIQRGDQISVSLGKAIEQSRISI 790

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ S  YA+SRW                      FY VDPS VR Q   FG+ F  L   
Sbjct: 791 VVLSTNYANSRWCMLELEKIMEVGRMNGRVVVPVFYDVDPSEVRHQKGRFGKAFEELLST 850

Query: 99  FP---EKMKRWKNALTEAADLSGF 119
                     W+  L +   ++GF
Sbjct: 851 ISVDESTYSNWRRQLFDIGGIAGF 874


>gi|357468521|ref|XP_003604545.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505600|gb|AES86742.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1092

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 277/756 (36%), Positives = 389/756 (51%), Gaps = 99/756 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF++FRGED R  F  HL    S K I  F+DD+L RGD+IS SL+  IE S I++II
Sbjct: 68  YDVFVNFRGEDIRHGFLGHLAKAFSRKQINAFVDDKLKRGDDISNSLVEAIEGSFISLII 127

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDP++VR    S+G  F+ L KR  
Sbjct: 128 FSENYASSSWCLEELLKIIDCKEKYGQIVIPVFYGVDPTNVRHLKKSYGNAFAELEKRHS 187

Query: 101 E-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K++ W+ AL ++A+LSG  S   R +++L+EEI N V+KRL +      KGL+G+   
Sbjct: 188 SLKVQIWRYALNKSANLSGIKSLDYRNDAELLEEIINLVMKRL-SKHPINTKGLIGIGKP 246

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +  +ESLL   SE V  + IWG+GGI K TIA  +F +    +EG  F   V E     G
Sbjct: 247 MAHLESLLRQESEKVRVIGIWGMGGIGKTTIAEEIFKQNCSEYEGCCFLAKVSEELGRHG 306

Query: 220 IKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
           I  L++KL S L        S +G    IE    R+ R KV IV DDV            
Sbjct: 307 ITFLKEKLFSRLLAEDVKIDSPNGLSSYIE---RRIGRMKVLIVLDDVKEEGQIEMLFGT 363

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                S SR+I+TTRD QVL     +  Y +  L  ++A +LF   AF   HL+  + EL
Sbjct: 364 LDWLLSDSRIIVTTRDMQVLICNEVDHVYEVGVLDSSEALELFNLNAFKQRHLETVYFEL 423

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + K I YA+G+PL LKVL   L G++KEVWES + KL+ +P  ++ +V+++SYD LD  +
Sbjct: 424 SKKVIDYAKGIPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVHDVMRLSYDDLDRLE 483

Query: 376 KNVFLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRMHDL 418
           K  FLDIACF  G               E  + V    +    K+LI +     I MHD+
Sbjct: 484 KKYFLDIACFFNGLNLKVDYMKLLLKDCESDNSVAVGLERLRDKALITISEDNIISMHDI 543

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGRE+VR+ES   P KR+RLW H DI  VL+ + GT+ I  IS+D++   R++ ++S
Sbjct: 544 LQEMGREVVRQESSADPRKRSRLWDHDDICDVLENDKGTDVIRSISVDLSG-RRKLMLSS 602

Query: 479 YAFSKMPKLRFLRFYGD-------------KNKCMV---SHLEGVPFAEVRHLEWPQCPL 522
           +AF+KM  L+FL F G+                C+V     L+  P  ++R+L W   PL
Sbjct: 603 HAFAKMTNLQFLDFRGEYEFGEDFLWNQKYDRDCLVLLPQGLQSFP-TDLRYLSWMNYPL 661

Query: 523 KTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-- 578
           K+      A+ LV L +  + VE+LW  VQ     L   K      +   K L+ LPD  
Sbjct: 662 KSFPEKFSAKNLVILDLSDSLVEKLWCGVQ----DLVNLK---EVRLSYSKFLKELPDFS 714

Query: 579 ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
           +  NL+ L +     ++ +  S+  L  +  L LS   +L     S  HLS L +L +  
Sbjct: 715 KATNLKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFA-SNSHLSSLHYLNLGS 773

Query: 638 CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
           C+ L+T      NL  L   N   +  LP+     S
Sbjct: 774 CKSLRTFSVTTYNLIELDLTNIC-INALPSSFGCQS 808



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 30/215 (13%)

Query: 570 CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           CK L        NL  L +    I  LP S G  S ++ L+L   S +E IP SI++L++
Sbjct: 774 CKSLRTFSVTTYNLIELDLTNICINALPSSFGCQSRLEILVL-RYSEIESIPSSIKNLTR 832

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSM--------------- 672
           L  L I  C +L  LPELP ++  L    C SL+ +  P+ +S                 
Sbjct: 833 LRKLDIRFCSKLLVLPELPSSVETLLVE-CRSLKTVLFPSTVSEQFKENKKRIEFWNCWN 891

Query: 673 ---SSVLYVNL---CNFLKLDPNELSEIVKDGWMKHSLYEER--GIKKSMYFPGNEIPKW 724
               S++ + L    N +K     LS +  D    +  Y++     +    +PG+ IP+W
Sbjct: 892 LDEHSLINIGLNLQMNLIKFTYQHLSTLEHDHVESYVDYKDNFDSYQAVYVYPGSSIPEW 951

Query: 725 FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             +++      +   P      + L+ F FC V+ 
Sbjct: 952 LEYKTTKDDMIVDLSPHY---LSPLLGFVFCFVLA 983


>gi|357509247|ref|XP_003624912.1| TMV resistance protein N [Medicago truncatula]
 gi|355499927|gb|AES81130.1| TMV resistance protein N [Medicago truncatula]
          Length = 2106

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 264/772 (34%), Positives = 390/772 (50%), Gaps = 85/772 (11%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
            +YDVFLSFRG DTR  F SHL+  L    I  F  DD++ RGD IS SLL  IE S I+I
Sbjct: 1024 IYDVFLSFRGNDTRAKFISHLYTALENAGIYVFRDDDEIQRGDQISASLLQAIEQSKISI 1083

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            ++ S  YA SRW                      FY +DPS VR QS  FG  F  L  R
Sbjct: 1084 VVLSRSYADSRWCMLELENIMGNSRTQGMVVVPVFYEIDPSEVRNQSGKFGEDFESLLLR 1143

Query: 99   FPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                  K+  WK AL E    +G      R ES+ I +I + V    D T        VG
Sbjct: 1144 TSVDTLKLSNWKTALAEVGGTAGVVIINSRNESEDIRKIVDHVTNLPDRTDLFVADHPVG 1203

Query: 156  VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            V+  ++++  LL    S+    L IWG+GGI K TIA A +NKI   FE   F LNVRE 
Sbjct: 1204 VDSRVQDVIQLLNNQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREV 1263

Query: 215  -EETGGIKDLQKKLLSELSKDGNMR--NIESQ----LNRLARKKVRIVFDDVT------- 260
             E+  G+  LQ++LLS++ K   ++   +ES       RL  K++ +V DDV        
Sbjct: 1264 WEQDNGVVSLQQRLLSDIYKTTKIKIETVESGKMILQERLRHKRIFLVLDDVNKVDQLNA 1323

Query: 261  ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR++ITTRD  +L     +  YRMKE+   ++ +LF   AF        
Sbjct: 1324 LCGSHEWFGEGSRIMITTRDDDLLSRLKVDYVYRMKEMDGNESLELFSWHAFKQPIPIEG 1383

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              +L+   + Y+ G+P+AL+V+G +L  R  K+ W+S + KL++IP+ E+ E LKIS+D 
Sbjct: 1384 FGDLSTDVVMYSGGLPIALQVIGSFLLTRRRKKEWKSVLEKLKLIPNDEVLEKLKISFDG 1443

Query: 371  L-DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            L DD  K +FLDIA F  G  ++EV +I +               KSL+ +D   +I MH
Sbjct: 1444 LSDDDVKEIFLDIAFFFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRKNKIGMH 1503

Query: 417  DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            DLLRDMGREIVRK+SI    + +RLW ++D+  VL K T    ++G++L M++++   +M
Sbjct: 1504 DLLRDMGREIVRKKSIEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSRMDSRTYM 1563

Query: 477  NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             +  F K+ KL+FL+  G + +    +L      ++R L W   PLK        E LV+
Sbjct: 1564 ETKDFEKINKLKFLQLAGVQLEGNYKYLS----RDIRWLCWHGFPLKYTPEEFHQEHLVA 1619

Query: 535  LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
            + +  + +EQ+W   Q L       K      +     L++ PD   L NLE L +K   
Sbjct: 1620 VDLKYSHLEQVWKKSQLL-------KELKFLNLSHSHNLKQTPDFSYLPNLEKLILKDCP 1672

Query: 592  TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELP 648
             +  +  ++G L  +  + L + + L  +P SI  L  +  L +S C ++  L    E  
Sbjct: 1673 NLSSVSPNIGNLKKILLINLKDCTGLCELPRSIYKLKSVKTLIVSGCTKIDKLEEDIEQM 1732

Query: 649  CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
             +L +L A + TS+ ++P  +    S+ +++LC F     N    I++  WM
Sbjct: 1733 TSLTILVA-DKTSVTRVPFAVVRSKSIGFISLCGFEGFARNVFPSIIQ-SWM 1782



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 186/504 (36%), Positives = 256/504 (50%), Gaps = 68/504 (13%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFI-DDQLIRGDNISQSLLGTIEASCIAI 59
            +YDVFLSFRG+DT   F SHL+  L    I  F  DD++ RGD +S SLL  I  S I+I
Sbjct: 522  IYDVFLSFRGDDTHAKFISHLYTALENAGIYVFRGDDEIQRGDQVSVSLLQAIGQSRISI 581

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            I+ S  YA+SRW                      FY++DP+ VR QS  FG  F  L  R
Sbjct: 582  IVLSRNYANSRWCMLELENIMGNSRTQGMVVVPVFYKIDPTEVRNQSGRFGEDFESLLLR 641

Query: 99   F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                  K   W+ AL E    +G      R ES+ I +I + V   LD T        VG
Sbjct: 642  MSVDTHKFSNWRRALAEVRGTTGVVIINSRNESEDITKIVDHVTNLLDRTDFFVVDHPVG 701

Query: 156  VECSIEEIESLLCIGSEGVCK--LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
            V+  ++++  LL  G E      L IWG+GGI K TIA A +NKI R FE   F LNVRE
Sbjct: 702  VDSRVQDVIQLLN-GQESKDPRLLGIWGMGGIGKTTIAKAAYNKIHRDFEAKSFLLNVRE 760

Query: 214  A-EETGGIKDLQKKLLSELSKDGNMR--NIESQ----LNRLARKKVRIVFDDVT------ 260
              E+  GI  LQ++LLS++ K   ++   +ES       RL  K++ +V DDV       
Sbjct: 761  VWEQDNGIVSLQQRLLSDIYKTTKIKIETVESGKMILQERLCHKRIFLVLDDVNKLDQLN 820

Query: 261  ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                       GSR+IITTRD  +L     +  YRMKE+   ++ +LF    F       
Sbjct: 821  ALCGSHGWFGEGSRIIITTRDDDLLGRLKVHYVYRMKEMDSNESLELFSWHVFKQPIPIE 880

Query: 311  SHIELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVE-IEEVLKISY 368
               +L+   +KY+ G PLAL+V+G +L   RSK+ W+S + KL   P V+ I ++L++S+
Sbjct: 881  GFGDLSTDVVKYSGGSPLALEVIGSFLLTRRSKKEWKSILEKL-TKPDVKLIPDMLRLSF 939

Query: 369  DSLDDSQKNVFLDIACF-LEGEHRDEVISIFD-------------ASKSLINLDLFYRIR 414
            D+L D+ K  FLDIAC  L G   D++I IF               + SL+ +D   RI 
Sbjct: 940  DNLSDNIKETFLDIACLNLSGMSLDDLIQIFKKDVHFKELGMEELVTISLVQIDSEKRIE 999

Query: 415  MHDLLRDMGREIVRKESINHPGKR 438
              DLL+ +GREI +++S      R
Sbjct: 1000 RDDLLQLLGREIRKEKSTAMAAGR 1023



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 173/504 (34%), Positives = 256/504 (50%), Gaps = 68/504 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDN-ISQSLLGTIEASCIA 58
           +YDVFLSF  +DT ++  S+L+  L++  I  + D D+L+  D  I+ S+L  I  S ++
Sbjct: 19  IYDVFLSFCDKDTSESLASYLYTALTVAGIVVYKDEDKLLNHDQMITSSVLHAIAGSRLS 78

Query: 59  IIIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           II+FS+ YA S                        FY  DPS V  Q    G     L++
Sbjct: 79  IIVFSKLYAVSTCCRQELEKIMECRRTTCQIVVPVFYDADPSGVFHQEDLLGEASKYLKQ 138

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           R  +K K     + E  ++SGF  +  R ES+ I +I + V   LD T        VGV+
Sbjct: 139 RILKKDK----LIHEVCNISGFAVHS-RNESEDIMKIVDHVTNLLDRTDLFVADHPVGVK 193

Query: 158 CSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
             +++I  LL    S+    L +WG+GGI K TIA A +NKI   FE   F  NVRE  E
Sbjct: 194 SRVQDIIQLLNSQESKSPLLLGVWGMGGIGKTTIAKAAYNKIHHDFEAKSFLPNVREVWE 253

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQ----LNRLARKKVRIVFDDVT--------- 260
           +  G+  LQ++LLS++ K   ++   +ES       RL  K++ +V DDV          
Sbjct: 254 QDNGVVSLQQQLLSDIYKTTKIKIDTVESGKMILQERLRHKRIFLVLDDVNKLDQLNALC 313

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITTRD  +L     +  YRMKE+   ++ +LF   AF          
Sbjct: 314 GSHGWFGEGSRIIITTRDDDLLGRLKVHYVYRMKEMDSNESLELFSWHAFKQPIPIEGFG 373

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           EL+   +KY++G+PLAL+V+G +L   R K+VW+  + KL   P  +I+EVLK+ +D+L 
Sbjct: 374 ELSTDVVKYSRGLPLALQVIGSFLLTRRRKKVWKRVLEKL-TKPDDKIQEVLKLIFDNLS 432

Query: 373 DSQKNVFLDIACF-LEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
           D+ K  FLDIAC  L G   D+++ IF                  L+NLD   RI MHDL
Sbjct: 433 DNIKETFLDIACLNLSGMSLDDLLQIFQKDVHFTELGMEELVINGLVNLDSEKRIGMHDL 492

Query: 419 LRDMGREIVRKESINHPGKRNRLW 442
           ++  GREI +++S       +++W
Sbjct: 493 VQLFGREIRQEKSTGMAAVSSKIW 516


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1289

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 275/780 (35%), Positives = 407/780 (52%), Gaps = 94/780 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRG+DTR+NFTSHL+  L+ + I  ++DD +L RG  I  +L   IE S  ++
Sbjct: 142 MYDVFLSFRGKDTRNNFTSHLYSNLAQRGIDVYMDDRELERGKTIEPALWKAIEESRFSV 201

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IIFS  YASS W                      FY VDPS V +Q   + + F    + 
Sbjct: 202 IIFSREYASSPWCLDELVKIVQCMKETGQTVLPIFYDVDPSEVAEQKGQYEKAFVEHEQN 261

Query: 99  FPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F E   K++ WK+ L+  A+LSG+D    R ES+ I+ IA  +  +L  T  + +K LVG
Sbjct: 262 FKENLEKVRNWKDCLSTVANLSGWDVRN-RNESESIKIIAEYISYKLSVTLPTISKKLVG 320

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +E +   +         + I G+GGI K T+A  ++++I   FEGS F  NVRE  
Sbjct: 321 IDSRVEVLNGYIGEEVGKAIFIGICGMGGIGKTTVARVLYDRIRWQFEGSCFLANVREVF 380

Query: 215 EETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS-------- 261
            E  G + LQ++LLSE+  +      + R IE    RL  KK+ ++ DDV          
Sbjct: 381 AEKDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRRLRLKKILLILDDVDDKKQLEFLA 440

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IIT+RD  V+      K Y  ++L   DA  LF Q AF  D      +
Sbjct: 441 EEPGWFGPGSRIIITSRDTNVITGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDFV 500

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+ + + YA G+PLAL+V+G +L GRS   W  A+ ++  IP  +I +VL+IS+D L +
Sbjct: 501 ELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMNEIPDCKIIDVLRISFDGLHE 560

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           S K +FLDIACFL+G  +D +I I D+              KSLI++    ++ MH+LL+
Sbjct: 561 SDKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSR-DQVWMHNLLQ 619

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG+EIVR ES   PG+R+RLW ++D+   L  NTG E IE I LDM  + +E   N  A
Sbjct: 620 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGI-KESQWNIEA 678

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
           FSKM +LR L+     N   +S        +++ LEW   P K+L +    ++LV L M 
Sbjct: 679 FSKMSRLRLLKI----NNVQLSEGPEDLSNKLQFLEWHSYPSKSLPVGLQVDQLVELHMA 734

Query: 539 CTKVEQLWD--------DVQRLPSSLCTFKTPITFEIID--------CKMLERLPDEL-- 580
            + +EQLW          +  L +SL   KTP    I +        C  L  +   L  
Sbjct: 735 NSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLSEVHPSLAH 794

Query: 581 -ENLEYLT-VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--S 636
            + L+Y+  V   +IR LP +L  +  +K  IL   S LE+ P+ + ++  L  L +  +
Sbjct: 795 HKKLQYMNLVNCKSIRILPNNL-EMGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGT 853

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
              +L +       LGLLS  +C +LE +P+ +  + S+  ++L  C+ LK  P +L E+
Sbjct: 854 GITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEV 913



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 83/216 (38%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---------ELENLEYLTVKGTTIRELPE 598
            +++ +PSS+   K+    ++  C  L+ +P+         E +NL+ L++ G     +P 
Sbjct: 878  NLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPP 937

Query: 599  SLGRLSWVKRLIL------------------------SNNSNLERIPESIRHLSKLTFLF 634
            SL  L  ++ L L                         + +N   +P+SI  L +L  L 
Sbjct: 938  SLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLV 997

Query: 635  ISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            +  C  L++LP++P               K+  GLS+                       
Sbjct: 998  LEDCTMLESLPKVP--------------SKVQTGLSN----------------------- 1020

Query: 695  VKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM 730
             + G+              +  PGNEIP WF HQ +
Sbjct: 1021 PRPGF-------------GIAIPGNEIPGWFNHQKL 1043


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 263/819 (32%), Positives = 412/819 (50%), Gaps = 143/819 (17%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            Y+VFLSFRG+DTR NFT HL+  L  K  +TF  D  IRG+ I  + L  IE S   ++I
Sbjct: 223  YEVFLSFRGQDTRQNFTDHLYAALYQKGFRTFRVD-YIRGEMILPTTLRAIEMSRCFLVI 281

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
             S+ YA S+W                      FY V+PS VR Q  S+G   +   ++ P
Sbjct: 282  LSKNYAHSKWCLDELKEIMESRRQMGKIVFPVFYHVNPSDVRNQGESYGEALANHERKIP 341

Query: 101  -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             E  ++ + AL E  +LSG+     + E+  IE+I   +L +        +K L+G++  
Sbjct: 342  LEYTQKLRAALREVGNLSGWHIQNGKSEADFIEDITCVILMKFSQKLLQVDKNLIGMDYR 401

Query: 160  IEEIE----SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
            +EE+E     ++   S  V  + I+G GGI K T+A  ++N+I   F  + F  NVRE  
Sbjct: 402  LEEMEEIFPQIIDPLSNDVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMIASFIANVREDS 461

Query: 216  ETGGIKDLQKKLLSEL--SKDGNMRNIESQL----NRLARKK-------------VRIVF 256
            ++ G+  LQK+LL ++   +   +RN++  +    +RL  KK             +  + 
Sbjct: 462  KSRGLLYLQKQLLHDILPRRKNFIRNVDEGVHMIKDRLCFKKVLLVLDDVDDLNQLEALA 521

Query: 257  DDVT---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
             D +    GSR+I+TTRDK +L+    +  Y  K+L + +A +LFC  AF  +H    + 
Sbjct: 522  GDHSWFGPGSRIIVTTRDKHLLELHGMDALYEAKKLDHKEAIELFCWNAFKQNHPKEDYE 581

Query: 314  ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
             L++  + Y  G+PL LK+LGC+L G++   WES ++KL+  P+ EI+ VLK SYD LDD
Sbjct: 582  TLSNSVVHYVNGLPLGLKILGCFLYGKTVRQWESELQKLQREPNQEIQRVLKRSYDELDD 641

Query: 374  SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            +Q+ +FLDIACF  GE +D V  I DA              K  + + L  +I MHDLL+
Sbjct: 642  TQQQIFLDIACFFNGEEKDFVTRILDACNFYAESGIGVLGDKCFVTI-LDNKIWMHDLLQ 700

Query: 421  DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
             MGREIVR+E    PGK +RL + + + +VL +  GT+AIEGI L+++++ R IH+ + A
Sbjct: 701  QMGREIVRQECPRDPGKWSRLCYPEVVNRVLTRKMGTKAIEGILLNLSRLTR-IHITTEA 759

Query: 481  FSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL------- 525
            F+ M  LR L+ + D         NK  +S     P  E+R+L W   PL++L       
Sbjct: 760  FAMMKNLRLLKIHWDLESASTREDNKVKLSKDFEFPSHELRYLHWHGYPLESLPLGFYAE 819

Query: 526  ------------------NICAEKLVSLKMPCTK--------------VEQLWDD----- 548
                              ++  EKL ++++ C++              +E+L  D     
Sbjct: 820  DLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLEKLILDGCSSL 879

Query: 549  VQRLPS----------------SLCTFKTPI---TFEIID---CKMLERLPD---ELENL 583
            ++  PS                 L  F + I     EI++   C  L++ P+    +ENL
Sbjct: 880  LEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGNMENL 939

Query: 584  EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
              L +  T I ELP S+G L+ +  L L    NL+ +P SI  L  L  L +S C +L++
Sbjct: 940  LELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSQLES 999

Query: 644  LPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
             PE+  N+  L     + T +E LP+ +  +  ++ +NL
Sbjct: 1000 FPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNL 1038



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 100/184 (54%), Gaps = 31/184 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDTR NFT HL+  L  K I+TF DD +L RG+ I+  LL  IE S I ++
Sbjct: 25  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDDEELRRGEEIAAELLKAIEESRICVV 84

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA SRW                      FY+VDPS+VRKQ  S+G   +   +  
Sbjct: 85  ILSKNYARSRWCLDELVKIMEWKQCMGQLVFPIFYQVDPSNVRKQMGSYGEALADHERTA 144

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIR--PESKLIEEIANDVLKRLDATFQSKNKGL 153
            E    K+KRW+ AL   A +SG+    +R  PES +IE I + + K L+       K L
Sbjct: 145 DEEGMSKIKRWREALWNVAKISGW---CLRNGPESHVIEMITSTIWKSLNRELLQVEKKL 201

Query: 154 VGVE 157
           VG++
Sbjct: 202 VGMD 205



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 150/343 (43%), Gaps = 76/343 (22%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPSS  +F++    +I DCK++E                     +P  +  L  +K+L 
Sbjct: 1058 RLPSSFSSFRSLSNLDISDCKLIEG-------------------AIPNGICSLISLKKLD 1098

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N N   IP  I  L+ L  L ++ C+ L  +PELP ++  + A NCTSL  LP G S
Sbjct: 1099 LSRN-NFLSIPAGISELTNLKDLRLAQCQSLTGIPELPPSVRDIDAHNCTSL--LP-GSS 1154

Query: 671  SMSSV-----LYVNLC------------NFLKLDPN-------ELSEIVKDGWMKHSLYE 706
            S+S++     L+ N                L++ P+         S +     M   L E
Sbjct: 1155 SVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLE 1214

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLK 765
               I  S+ FPG  IP+W  HQ++GSS  +K + P     +  + FA C+V+   P   +
Sbjct: 1215 --NIAFSIVFPGTGIPEWIWHQNVGSS--IKIQLPTNWYSDDFLGFALCSVLEHLPE--R 1268

Query: 766  YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEY 822
               H + +    G++         K  GH + W  G I  V S+HV+LG   C+      
Sbjct: 1269 IICHLNSDVFNYGDL---------KDFGHDFHW-TGNI--VGSEHVWLGYQPCSQLRLFQ 1316

Query: 823  FGP----NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            F      N+ E SF     F+         VKKCG+  +YA+D
Sbjct: 1317 FNDPNEWNHIEISFEAAHRFNSSA---SNVVKKCGVCLIYAED 1356


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 262/804 (32%), Positives = 399/804 (49%), Gaps = 127/804 (15%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIII 61
           DVF+SFRGED R  F SHL   L    I  F DD  L RG +IS  L+ TI  S  A+++
Sbjct: 28  DVFVSFRGEDVRKTFVSHLFCELDRMGINAFRDDLDLERGKHISSELVDTIRGSRFAVVV 87

Query: 62  FSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            S  YASS W                       FY VDPS VR+Q+ SFG        + 
Sbjct: 88  VSRNYASSSWCLDELLEIMERKNTVDQKTIIPVFYEVDPSDVRRQTGSFGEGVESHSDK- 146

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            +K+ +W+ ALT+ A +SG DS   R ESKLI++I  D+  RL +T       L+G+   
Sbjct: 147 -KKVMKWREALTQLAAISGEDSRNWRDESKLIKKIVKDISDRLVSTSLDDTDELIGMSSH 205

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           ++ ++S++ I  + V  + IWG+GG+ K TIA  ++NK+S  F+   F  NV+E     G
Sbjct: 206 MDFLQSMMSIEEQDVRTVGIWGMGGVGKTTIAKYLYNKLSSRFQAHCFMENVKEVCNRYG 265

Query: 220 IKDLQKKLLSELSKDGNMRNIESQLN-RLARKKVRIVFDDVT----------------SG 262
           ++ LQ + L  + ++ +  +  S +  R  RK+V IV DDV                  G
Sbjct: 266 VERLQGEFLCRMFRERDSVSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPG 325

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SR+I+TTRD+ +L +      Y++K L   +A  LFC +AF  + +      L  +A+ Y
Sbjct: 326 SRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAVQAVNY 385

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A G+PLAL+VLG +L  R +  WES + +LE  PH +I EVL++SYD LD+ +K +FL I
Sbjct: 386 AFGLPLALRVLGSFLYRRGEREWESTLARLETSPHSDIMEVLRVSYDGLDEQEKAIFLYI 445

Query: 383 ACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           +CF   +H D    + D               KSLI +     I+MHDL+  MGRE+VR+
Sbjct: 446 SCFYNMKHVDYATRLLDICGYAAEIGITVLTEKSLIVISNGC-IKMHDLVEQMGRELVRR 504

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           ++     +R  LW  +DI  +L + TGT  +EG+SL+M++V+ E+  +   F  +  L+ 
Sbjct: 505 QA-----ERFLLWRPEDICDLLSETTGTSVVEGMSLNMSEVS-EVLASDQGFEGLSNLKL 558

Query: 490 LRFY-----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
           L FY     G+    + + L  +P  ++R+L W   PL +L      E LV L M  + +
Sbjct: 559 LNFYDLSYDGETRVHLPNGLTYLP-RKLRYLRWDGYPLNSLPSRFHPEFLVELFMSNSHL 617

Query: 543 EQLWDDVQRLPS-----------------------------SLCTFKTPIT--------- 564
             LW+ +Q L                               S C   T +T         
Sbjct: 618 HYLWNGIQPLRKLKKMDLSRCKYLIEIPDLSKATNLEELNLSYCQSLTEVTPSIKNLQKL 677

Query: 565 --FEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLER 619
             F + +C  L+++P    L++LE + + G +++   PE     SW  R +  +++ +E 
Sbjct: 678 YCFYLTNCTKLKKIPSGIALKSLETVGMNGCSSLMHFPE----FSWNARRLYLSSTKIEE 733

Query: 620 IPES-IRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEKLPAGLSSMS-- 673
           +P S I  LS L  L +S C+ ++TLP       +L  LS   C  LE LP  L S++  
Sbjct: 734 LPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLLSLTCL 793

Query: 674 SVLYVNLCNFLKLDPNELSEIVKD 697
             L V+ C    L+ NE   + K+
Sbjct: 794 ETLEVSGC----LNINEFPRLAKN 813



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 15/178 (8%)

Query: 582  NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            +L  L +    + E+P S+G L  +  L LS N N E IP SIR L++L+ L +++C+RL
Sbjct: 959  DLRALCLSNMNMIEIPNSIGNLWSLSELDLSGN-NFEHIPASIRRLTRLSRLDVNNCQRL 1017

Query: 642  QTLP-ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
            Q LP +LP  L  + A  CTSL  + +G      +  +   N  KLD  + ++I+    M
Sbjct: 1018 QALPDDLPRRLLYIYAHGCTSLVSI-SGCFKPCCLRKLVASNCYKLD--QEAQILIHRNM 1074

Query: 701  KHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
            K     +    +  YFPG ++P  F HQ+MGSS  L+ R P     + ++ F+ C ++
Sbjct: 1075 KL----DAAKPEHSYFPGRDVPSCFNHQAMGSS--LRIRQPS----SDILGFSACIMI 1122



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 31/173 (17%)

Query: 522 LKTLNICAEKLVSLK-MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL 580
           ++TL    + LVSLK +     + L    + LP SL +     T E+  C  +   P   
Sbjct: 756 IRTLPSSVKHLVSLKSLSLNGCKHL----ENLPDSLLSLTCLETLEVSGCLNINEFPRLA 811

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           +N+E L +  T+I E+P  +  LS ++ L +S N  L+ +P SI  L  L  L +S C  
Sbjct: 812 KNIEVLRISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKLSGCCV 871

Query: 641 LQTLP---------------------ELPCNLGLLSARNCTSLEKLPAGLSSM 672
           L++LP                     ELP N+G     N  +LE L AG +++
Sbjct: 872 LESLPPEICQTMSCLRWLDLERTSIKELPENIG-----NLIALEVLQAGRTAI 919


>gi|15238807|ref|NP_197337.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005160|gb|AED92543.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 900

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 257/757 (33%), Positives = 397/757 (52%), Gaps = 81/757 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G+D R  F SHL      K I+TFID+ + R   IS  L+  I  S IA+++
Sbjct: 16  HHVFPSFSGKDVRRTFLSHLLKEFRRKGIRTFIDNDIKRSQMISSELVRAIRESRIAVVV 75

Query: 62  FSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP--EK 102
            S  YASS W                  FY VDPS VRK++  FG+ F    +R P  E 
Sbjct: 76  LSRTYASSSWCLNELVEIKKVSQMIMPVFYEVDPSDVRKRTGEFGKAFEEACERQPDEEV 135

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
            ++W+ AL   A+++G  S     E+ LI++IA  +   L++T    +  LVG++  + E
Sbjct: 136 KQKWREALVYIANIAGESSQNWDNEADLIDKIAMSISYELNSTLSRDSYNLVGIDNHMRE 195

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD 222
           ++SLLC+ S  V  + IWG  GI K TIA A+FN++S +F+ + F  NV+ +  T  +  
Sbjct: 196 LDSLLCLESTEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSSRTSELDA 255

Query: 223 ------LQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT-------------- 260
                 LQ++ LSE+    +M+  +  L   RL   KV +V DDV               
Sbjct: 256 YGFQLRLQEQFLSEVIDHKHMKIHDLGLVKERLQDLKVLVVLDDVDKLEQLDALVKQSQW 315

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+TT +KQ+L+       Y +     +D+ ++FCQ+AFG        IEL  +
Sbjct: 316 FGSGSRIIVTTENKQLLRAHGITCIYELGFPSRSDSLQIFCQYAFGESSAPDGCIELATE 375

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             K A  +PLALKVLG  L G SK+  +SA+ +L    + +I  VL++ YD + D  K +
Sbjct: 376 ITKLAGYLPLALKVLGSSLRGMSKDEQKSALPRLRTSLNEDIRNVLRVGYDGIHDKDKVI 435

Query: 379 FLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYR-IRMHDLLRDMGR 424
           FL IAC   GE+ D V  I  +             S+SLI++    R I MH+LL  +GR
Sbjct: 436 FLHIACLFNGENVDYVKQILASSGLDVTFGLQVLTSRSLIHISRCNRTITMHNLLEQLGR 495

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIV ++SI  PGKR  L    +IY VL  NTGT A+ GISLD++K+N E+ +N  AF  M
Sbjct: 496 EIVCEQSIAEPGKRQFLMDASEIYDVLADNTGTGAVLGISLDISKIN-ELFLNERAFGGM 554

Query: 485 PKLRFLRFY---GDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKT--LNICAEKLVSLKM 537
             L FLRFY     K++  +    G+ +   ++R L W   P+ +  L+ C + LV + +
Sbjct: 555 HNLLFLRFYKSSSSKDQPELHLPRGLDYLPRKLRLLHWDAFPMTSMPLSFCPQFLVVINI 614

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK--GTTI 593
             +++E+LW+  Q L       ++    ++   + L+ +PD  +  N+E L +   G+ +
Sbjct: 615 RESQLEKLWEGTQPL-------RSLKQMDLSKSENLKEIPDLSKAVNIEELCLSYCGSLV 667

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             LP S+  L+ +  L +   S LE IP ++  L  L+ L +  C RL++ PE+   +G 
Sbjct: 668 M-LPSSIKNLNKLVVLDMKYCSKLEIIPCNM-DLESLSILNLDGCSRLESFPEISSKIGF 725

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
           LS    T++E++P  ++S   +  +++  C  LK  P
Sbjct: 726 LSLSE-TAIEEIPTTVASWPCLAALDMSGCKNLKTFP 761


>gi|356561218|ref|XP_003548880.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 280/838 (33%), Positives = 414/838 (49%), Gaps = 113/838 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD +L +GD I+ +L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRYGFTGNLYNVLRERGIHTFIDDDELQKGDEITTALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+V+PS VRK   S+G     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTEGKNDRLVLPVFYKVNPSIVRKHRGSYGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L     EK++ WK AL + +++SG  F  +  + E K I+EI   V  + +  F      
Sbjct: 128 LNSNNMEKLETWKMALQQVSNISGHHFQHDGGKYEYKFIKEIVESVSSKFNRAFLHVPDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG+E  + E++SLL I S+ V  +  I G+  + K T+A AV+N I+  FE S F  NV
Sbjct: 188 LVGLESPVLEVKSLLDIESDDVVHMVGIHGLAAVGKTTLAVAVYNSIADQFEASCFLANV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS---- 261
           RE     G++DLQ  LLS+   +  ++       I    ++L +KKV ++ DDV      
Sbjct: 248 RETSNKIGLEDLQSILLSKTVGEKKIKLTNWREGIPIIKHKLKQKKVLLILDDVDEHKQL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HL 308
                       GSRVIITTRD+ +L        Y++KEL    A +L  Q AF  +  +
Sbjct: 308 QAIIGNPDWFGRGSRVIITTRDEHLLALHNVKITYKVKELNEKHALQLLTQKAFELEKEV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++A+ YA G+PLAL+V+G  L  +S E WESA+   E IP ++I  +LK+SY
Sbjct: 368 DPSYHDILNRAVTYASGLPLALEVIGSNLFEKSIEEWESALNGYERIPDIKIYAILKVSY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-I 413
           D+L++ +K++FLDIAC  +     EV  I  A               KSLIN+   ++ I
Sbjct: 428 DALNEDEKSIFLDIACCFKDYELAEVQDILYAHYGRCMKYHIGVLVKKSLINIHRLHKVI 487

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           R+H+L+ DMG+EIVR+ES   P KR+RLW H DI QVL++N GT  IE I ++ +    E
Sbjct: 488 RLHNLIEDMGKEIVRRESPTEPWKRSRLWFHDDINQVLQENKGTSKIEIICMNFSSFGEE 547

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           +  +  AF KM  L+ L    D   C     + +P   +R LEW +CP +    N   ++
Sbjct: 548 VEWDGDAFKKMKNLKTLIIKSD---CFSKGPKHLP-NTLRVLEWWRCPSQDWPHNFNPKQ 603

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           L   K+P    +  +  +   P     F    +  +  C  L  +PD             
Sbjct: 604 LAICKLP----DNSFTSLGLAPLFEKKFVNLTSLNLSMCDSLTEIPD------------- 646

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CN 650
                   +  LS +++L  +   NL  I  S+  L KL  L    C  L++ P L   +
Sbjct: 647 --------VSCLSKLEKLSFARCRNLFTIHHSVGLLEKLKILDAEGCRELKSFPPLKLTS 698

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN--ELSEIVKDGWMKHSLYE 706
           L       C SLE  P  L  M ++  + L  C   KL P+   L+ + +  ++    Y 
Sbjct: 699 LERFELSYCVSLESFPEILGKMENITELGLIDCPITKLPPSFRNLTRL-QVLYLGQETYR 757

Query: 707 ERGIKKSMYFPG-NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
            RG   + +      +P+ FR +    +A L+ R   P    KL S A C+ + F  F
Sbjct: 758 LRGFDAATFISNICMMPELFRVE----AAQLQWR--LPDDVLKLTSVA-CSSIQFLCF 808


>gi|357499331|ref|XP_003619954.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494969|gb|AES76172.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1098

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 287/885 (32%), Positives = 437/885 (49%), Gaps = 149/885 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L  K I TFIDD  L+RGD I+ SL+  IE S I I 
Sbjct: 18  YQVFLSFRGIDTRHGFTGNLYKALIDKGIHTFIDDNDLLRGDEITPSLVKAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YASS +                      FY VDP+H+R Q+ S+G H ++  K+F
Sbjct: 78  IFSANYASSSFCLDELVHIIHCYKTKGCSVLPVFYGVDPTHIRHQTGSYGEHLTKHEKKF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  +++++WK ALT+AA+LSG+  +    E K IE I  D+  +++  F    K  
Sbjct: 138 QNNKENMQRLEQWKMALTKAANLSGYHCSQ-GYEYKFIENIVKDISDKINRVFLHVAKYP 196

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  +++++ LL  GS + V  + ++G GG+ K T+A A++N ++  FEG  F  NVR
Sbjct: 197 VGLESRVQQVKLLLDKGSKDEVLMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHNVR 256

Query: 213 EAEETGGIKDLQKKLLSELS----KDGNM-RNIESQLNRLARKKVRIVFDDVTS------ 261
           E      +K LQ++LLS+      K G++   I     RL+RKK+ ++ DDV        
Sbjct: 257 ENSAHNNLKHLQEELLSKTVRVNIKLGDVSEGIPIIKERLSRKKILLILDDVDKLEQLEA 316

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L        Y +K L   +A +L  +W    D++ + 
Sbjct: 317 LAGGLDWFGCGSRVIITTRDKHLLNCHGIEITYAVKGLYGTEALELL-RWMAFRDNVPSG 375

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + E+  +A+ YA G+PL ++V+   L G+S E W+S +   E IP+ +I+E+LK+SYD L
Sbjct: 376 YEEILSRAVSYASGLPLVIEVVASNLFGKSIEKWKSTLDGYEKIPNKKIQEILKVSYDDL 435

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR----- 412
           ++ +++VFLDIACF +G    EV     A               KSLI ++         
Sbjct: 436 EEEEQSVFLDIACFFKGCRLSEVEETLLAHYGHCIKHHVGVLVEKSLIEINTQSHRSYND 495

Query: 413 -IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            + +HDL+ DMG+EIVR+ES   PG+R+RLW H DI  VL+K+TGT  IE I L+   + 
Sbjct: 496 DVALHDLIEDMGKEIVRQESSKEPGERSRLWCHNDIVHVLQKDTGTSNIEMIYLNCPSME 555

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE- 530
             I  N   F KM  L+ L     +      HL     + +R L+W  CP K+L+ C   
Sbjct: 556 TIIDWNGKPFRKMTNLKTLIIENGRFSKGPKHLP----SSLRFLKWKGCPSKSLSSCISN 611

Query: 531 ------KLVSLK-------MP-CTKVEQLWDDVQRLPSSLCTFKTPITF----EIIDC-- 570
                 K ++L        +P  + +  L     R  ++L T    + +    EI+D   
Sbjct: 612 KEFNNMKFMTLDDCEYLTHIPNVSGLSNLEKFSFRNCANLITIHNSVGYLNKLEILDAYG 671

Query: 571 --KMLERLPDELENL-EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
             K++   P  L +L E+      ++++ PE L ++S ++ + L    ++E  P   ++L
Sbjct: 672 CRKIVSFPPLRLPSLKEFQLSWCKSLKKFPELLCKMSNIREIQLIECLDVEEFPFPFQNL 731

Query: 628 SKLTFLFISHCERLQTLPE--------LPCNLGLLSARNCT-SLEKLPAGLSSMSSVLYV 678
           S+L+ L I+ CE L+  P         +  N+ +L   N   S + LP  L    +V Y+
Sbjct: 732 SELSDLVINRCEMLR-FPRHDDKLDFIVFSNVQMLDLNNSNLSDDCLPILLKWCVNVKYL 790

Query: 679 NLC-NFLKLDPNELSE--IVKDGWMKHSLYEE--RGIKKSM------------------- 714
           NL  N  K+ P  LSE  ++K  ++    Y E  RGI +++                   
Sbjct: 791 NLSKNNFKILPECLSECHLLKHLYLDKCQYLEEIRGIPQNLEHLDAVNCYSLTSSCRRML 850

Query: 715 -------------YFP--GNEIPKWFRHQSMGSSATLKTRPPRPA 744
                        YFP     IP WF HQ  G + +   R   P+
Sbjct: 851 LSQKLHEAGCTRYYFPTGAERIPDWFEHQIRGQTVSFWFRKKIPS 895


>gi|27764536|gb|AAO23066.1| R 3 protein [Glycine max]
          Length = 897

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 263/720 (36%), Positives = 377/720 (52%), Gaps = 90/720 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRG DTR  FT +L+  L  + I TFIDDQ L RGD I+ +L   I+ S IAI
Sbjct: 11  IYDVFLSFRGLDTRHGFTGNLYKALDDRGIYTFIDDQELPRGDEITPALSKAIQESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     FY VDPS VR+Q  S+G   ++ +KRF
Sbjct: 71  TVLSQNYASSSFCLDELVTVLLCKRKGLLVIPVFYNVDPSDVRQQKGSYGEAMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I+ I   V + ++ T        
Sbjct: 131 KAKKEKLQKWRMALHQVADLSGYHFKDGDAY--EYKFIQSIVEQVSREINRTPLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS  V  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 189 VGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS----- 261
           E     G+K LQ  +LS+L   KD N+ + +   +    RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHLQSIILSKLLGEKDINLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLK 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L  + A +L    AF  +  D 
Sbjct: 309 AIVGRPDWFGPGSRVIITTRDKHILKYHEVERTYEVKVLNQSAALQLLKWNAFKREKNDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+PLAL+++G  L G++   WESAM   + IP  EI E+LK+S+D+
Sbjct: 369 SYEDVLNRVVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEG------EH----------RDEVISIFDASKSLINLDLFYRIR 414
           L + QKNVFLDIAC L+G      EH          +  +  + D S + +   +   + 
Sbjct: 429 LGEEQKNVFLDIACCLKGCKLTEVEHMLRGLYDNCMKHHIDVLVDKSLTKVRHGI---VE 485

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DMGREI R+ S   PGKR RLW  KDI QVLK NTGT  IE I +D +  ++E 
Sbjct: 486 MHDLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIIYVDFSISDKEE 545

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            +  N  AF KM  L+ L     K     ++        +R LEW + P   L  N    
Sbjct: 546 TVEWNENAFMKMENLKILIIRNGKFSKGPNYFP----QGLRVLEWHRYPSNCLPSNFDPI 601

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV  K+P + +       +   SS     T + F+   CK L ++PD  +L NL  L+ 
Sbjct: 602 NLVICKLPDSSMTSF----EFHGSSKLGHLTVLKFDW--CKFLTQIPDVSDLPNLRELSF 655

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           +   ++  + +S+G L+ +K+L       L   P    HL+ L  L +SHC  L+  PE+
Sbjct: 656 QWCESLVAVDDSIGFLNKLKKLNAYGCRKLTSFPP--LHLTSLETLELSHCSSLEYFPEI 713



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           + + V  L LS N N   +PE  + L  L  L +SHC+ LQ +  +P NL L +ARNC S
Sbjct: 822 KFAHVGYLNLSRN-NFTILPEFFKELQFLGSLNVSHCKHLQEIRGIPQNLRLFNARNCAS 880

Query: 662 LEKLPAGLSSMSSVLYVNLCNFL 684
           L       SS  S+L   + +FL
Sbjct: 881 LT------SSSKSMLLNQVLSFL 897


>gi|359493574|ref|XP_002271071.2| PREDICTED: TMV resistance protein N [Vitis vinifera]
          Length = 813

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 223/552 (40%), Positives = 314/552 (56%), Gaps = 66/552 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L   +I TF DD+ L RG+ I+  LL  IE S IAII
Sbjct: 21  YDVFLSFRGEDTRKSFTDHLYSALIRNNIHTFRDDEELPRGEEIAPELLKAIEESRIAII 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQS----HSFGRHFSRL 95
           +FS+ YA S+W                      FY VDPS VRKQ+     +F RH    
Sbjct: 81  VFSKTYAHSKWCLDELVKIMECKEERGQIVIPIFYNVDPSEVRKQTGICGEAFTRHEENA 140

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   EK+++W+ A+ +A +L+G  +   R ES LI+EI  +V   L       N+ +VG
Sbjct: 141 DEERKEKIRKWRTAMEQAGNLAGHVAEN-RYESTLIDEIIENVHGNLPKIL-GVNENIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-- 213
           ++  +E++ SLL I S  V  + ++G+GGI K TI  A++N+IS  FE      NVR+  
Sbjct: 199 MDSRLEKLISLLKIESNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKES 258

Query: 214 AEETGGIKDLQKKLLSELSKDGN--MRNIESQL----NRLARKKVRIVFDDVTS------ 261
            + +G +K  QK L   L   G   ++N+   +    ++L+ KKV +  DDV        
Sbjct: 259 TKNSGLLKLQQKLLDDTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEH 318

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTR K +L     N  Y +K+L + +A +LFC++AF   HL   
Sbjct: 319 LIGKHNWFGPGSRIIITTRKKDLLTRHEVNDIYEVKKLNFHEALQLFCRYAFKQHHLKEG 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +L+ + ++YA G+PLALKVLG  L G+    W+S +RKLE +P++EI  VLKIS+D L
Sbjct: 379 YADLSHQVVRYADGLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEIVNVLKISFDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
           D +Q+ +FLDIACF +G   + V  I D S             +  I +     I MHDL
Sbjct: 439 DYTQRMIFLDIACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEMHDL 498

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L  MG+ IV +E  N PG+R+RLW H DIY+VLK+NTGTE IEGI LD++K + +I    
Sbjct: 499 LAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDK-SEQIQFTC 557

Query: 479 YAFSKMPKLRFL 490
            AF +M +LR L
Sbjct: 558 KAFERMNRLRLL 569


>gi|357449971|ref|XP_003595262.1| Heat shock protein [Medicago truncatula]
 gi|355484310|gb|AES65513.1| Heat shock protein [Medicago truncatula]
          Length = 1541

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 266/752 (35%), Positives = 399/752 (53%), Gaps = 114/752 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+NFT  L+ +L    I TF D+ Q+ +G+ I+ +L   I+ S I I+
Sbjct: 14  YDVFISFRGIDTRNNFTRDLYDILYQNGIHTFFDEEQIQKGEEITPALFQAIQQSRIFIV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPS VR QS ++G    +  KRF
Sbjct: 74  VFSNNYASSTFCLNELVVILDCSNTHGRLLLPVFYDVDPSQVRHQSGAYGEALGKHEKRF 133

Query: 100 ---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               +K+++W++AL +AA++SG+   +  + E K I  I  +V K+++ T        V 
Sbjct: 134 CDDKDKVQKWRDALCQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTTLHVADNPVA 193

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+ SLL  G E G   + I+GIGG+ K T+A AV+N IS  F+G  F   +RE+
Sbjct: 194 LESPMLEVASLLDSGPEKGTNMVGIYGIGGVGKSTLARAVYNHISDQFDGVCFLAGIRES 253

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
               G+  LQ+ LLSE+   +D  +R++   ++    RL RKKV +V DDV         
Sbjct: 254 AINHGLAQLQETLLSEILGEEDIRIRDVYRGISIIKRRLQRKKVLLVLDDVDKVKQIQVL 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS++++TTRDK +L        Y +K+L +  +  LF   AF    +D  +
Sbjct: 314 AGGHDWFGPGSKIVVTTRDKHLLAIHEILNLYEVKQLNHEKSLDLFNWHAFRNRKMDPCY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +++++A+ YA G+PLAL+V+G +L G+S +VW+S++ K E + H EI E+LK+SYD LD
Sbjct: 374 SDMSNRAVSYASGLPLALEVIGSHLFGKSLDVWKSSLDKYERVLHKEIHEILKVSYDDLD 433

Query: 373 DSQKNVFLDIACFL---EGEHRDEVISI--FDA--------SKSLINLDLFYRIRMHDLL 419
           D QK +FLDIACF    E  +  E++ +  F A         KSLI +D    +RMHDL+
Sbjct: 434 DDQKGIFLDIACFFNSYEMSYAKELLYLHGFSAENGIQVLTDKSLIKIDANGCVRMHDLV 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +DMGREIVR+ES   PG+R+RLW+  DI  VL+ N GT+ IE I +++   ++E+  +  
Sbjct: 494 QDMGREIVRQESTVEPGRRSRLWYDDDIVHVLETNMGTDTIEVIIINLCN-DKEVQWSGK 552

Query: 480 AFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           AF+KM  L+ L     RF     K   S         +R L+W   P ++L  +   + L
Sbjct: 553 AFTKMKNLKILIIRSARFSRGPQKLPNS---------LRVLDWNGYPSQSLPADFNPKNL 603

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
           + L +P               S L +FK    F               E+L +L  +G  
Sbjct: 604 MILSLP--------------ESCLVSFKLLKVF---------------ESLSFLDFEGCK 634

Query: 593 -IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELP 648
            + ELP SL  L  +  L L + +NL RI +SI  L+KL  L    C++L+ L     LP
Sbjct: 635 LLTELP-SLSGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSSQRCKQLELLVPNINLP 693

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
            +L  L  R C+ L+  P  L  M ++ YV L
Sbjct: 694 -SLETLDIRGCSRLKSFPEVLGVMENIRYVYL 724


>gi|356561829|ref|XP_003549179.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1090

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 263/727 (36%), Positives = 379/727 (52%), Gaps = 105/727 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRG DTR  FT +L+  L  + I TFIDDQ L RGD I+ +L   I+ S IAI
Sbjct: 54  IYDVFLSFRGLDTRHGFTGNLYKALDDRGIYTFIDDQELPRGDEITPALSKAIQESRIAI 113

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     FY VDPS VR+Q  S+G   ++ +KRF
Sbjct: 114 TVLSQNYASSSFCLDELVTVLLCKRKGLLVIPVFYNVDPSDVRQQKGSYGEAMAKHQKRF 173

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I+ I   V + ++ T        
Sbjct: 174 KAKKEKLQKWRMALHQVADLSGYHFKDGDAY--EYKFIQSIVEQVSREINRTPLHVADYP 231

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS  V  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 232 VGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVR 291

Query: 213 EAEETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS----- 261
           E     G+K LQ  +LS+L   KD N+ + +   +    RL RKKV ++ DDV       
Sbjct: 292 EESNKHGLKHLQSIILSKLLGEKDINLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLK 351

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L  + A +L    AF  +  D 
Sbjct: 352 AIVGRPDWFGPGSRVIITTRDKHILKYHEVERTYEVKVLNQSAALQLLKWNAFKREKNDP 411

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+PLAL+++G  L G++   WESAM   + IP  EI E+LK+S+D+
Sbjct: 412 SYEDVLNRVVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDA 471

Query: 371 LDDSQKNVFLDIACFLEG------EH----------RDEVISIFDASKSLINLDLFYRIR 414
           L + QKNVFLDIAC L+G      EH          +  +  + D S + +   +   + 
Sbjct: 472 LGEEQKNVFLDIACCLKGCKLTEVEHMLRGLYDNCMKHHIDVLVDKSLTKVRHGI---VE 528

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DMGREI R+ S   PGKR RLW  KDI QVLK NTGT  IE I +D +  ++E 
Sbjct: 529 MHDLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIIYVDFSISDKEE 588

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            +  N  AF KM  L+ L     K     ++        +R LEW + P   L  N    
Sbjct: 589 TVEWNENAFMKMENLKILIIRNGKFSKGPNYFP----QGLRVLEWHRYPSNCLPSNFDPI 644

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFK----TPITFEIID---CKMLERLPD--ELE 581
            LV  K+P               SS+ +F+    +  + +I+    CK L ++PD  +L 
Sbjct: 645 NLVICKLP--------------DSSMTSFEFHGSSKASLKILKFDWCKFLTQIPDVSDLP 690

Query: 582 NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           NL  L+ +   ++  + +S+G L+ +K+L       L   P    HL+ L  L +SHC  
Sbjct: 691 NLRELSFQWCESLVAVDDSIGFLNKLKKLNAYGCRKLTSFPP--LHLTSLETLELSHCSS 748

Query: 641 LQTLPEL 647
           L+  PE+
Sbjct: 749 LEYFPEI 755



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 45/176 (25%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           + + V  L LS N N   +PE  + L  L  L +SHC+ LQ +  +P NL L +ARNC S
Sbjct: 864 KFAHVGYLNLSRN-NFTILPEFFKELQFLGSLNVSHCKHLQEIRGIPQNLRLFNARNCAS 922

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
           L       SS  S+L                       +   L+E  G +    FPG  I
Sbjct: 923 LT------SSSKSML-----------------------LNQELHEAGGTQ--FVFPGTRI 951

Query: 722 PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWD 777
           P+W  HQS G S++   R   P    KL+      V+            SGE +W+
Sbjct: 952 PEWLDHQSSGHSSSFWFRNKFPP---KLLCLLIAPVL----------GDSGEKEWN 994


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 256/743 (34%), Positives = 379/743 (51%), Gaps = 82/743 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDCLYHELQRQGIRTFRDDLQLERGTAISLELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S +YA+S W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPKYATSTWCLLELSEIIECMEERGTIMPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           E  K    W++ALT+ A L+G+ S   R E++LI EI   +  ++  +      ++ LVG
Sbjct: 139 EGNKEVEGWRDALTKVASLAGWTSENYRYETELIREIVQALWSKVQPSLTVFGSSEKLVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +E+I  LL   +  V  + IWG+GG+ K T+A  V+ +IS  F+   F  N+RE  
Sbjct: 199 MDIKLEDIYDLLDEEANDVRFIGIWGMGGLGKTTLARVVYEEISHRFDVRVFLANIREVS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTSG------- 262
            T G+  LQK++LS++ K+ N++       I      L  K V +V DDV          
Sbjct: 259 ATHGLVYLQKQILSQILKEENVKVWDVYSGITMTKRCLCNKAVLLVLDDVDQSEQLEHLV 318

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTR+ +VL      K Y +K L   +A +LF   AF     +  + 
Sbjct: 319 GEKDWFGLRSRIIITTRNLRVLVTHGVEKPYELKRLNKDEALQLFSWKAFRKCEPEEDNA 378

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL    + YA G+PLALK LG +L  RS   W SA++KL+  P+  + E+LK+S+D LD+
Sbjct: 379 ELCKSFVTYAGGLPLALKTLGSFLYKRSLHSWSSALQKLQQTPNRSVFEILKLSFDGLDE 438

Query: 374 SQKNVFLDIACF---LEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLLR 420
            +K +FLDIACF    + E   E +  FD            KSL+ +    R+ +HDL+ 
Sbjct: 439 MEKKIFLDIACFRRLYDNESMIEQVHSFDFCPRITIDVLVEKSLLTISSDNRVDVHDLIH 498

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG EIVR+E+   PG R+RL    DI+ V  KNTGTEAIEGI L + ++  E   N  A
Sbjct: 499 EMGCEIVRQEN-KEPGGRSRLCLRNDIFHVFTKNTGTEAIEGILLHLAEL-EEADWNLEA 556

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
           FSKM KL+ L  +  +      +L       +R L W   P K+L  C   +KL  L + 
Sbjct: 557 FSKMCKLKLLYIHNLRLSLGPIYLPNA----LRFLNWSWYPSKSLPPCFQPDKLTELSLV 612

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            + ++ LW+  + L +         + ++ D   L R PD   + NLE L ++G  ++ +
Sbjct: 613 HSNIDHLWNGKKYLGNLK-------SIDLSDSINLTRTPDFTGIPNLEKLILEGCISLVK 665

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE       LS
Sbjct: 666 IHPSIASLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKTLS 724

Query: 656 AR--NCTSLEKLPAGLSSMSSVL 676
                 +++E LP+    +S  L
Sbjct: 725 KLCIGGSAVENLPSSFERLSESL 747



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 143/355 (40%), Gaps = 67/355 (18%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLE-RLPDE---LENLEYLTVKGTTIRELPESLGRLSWVK 607
            L +SL  F +    ++ DC + E  +P++   L +LE L + G     LP S+  LS +K
Sbjct: 789  LLASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLIGNNFVNLPASIHLLSKLK 848

Query: 608  RLILSNNSNLERIPE--SIRHLSKLTFLFISHCERLQTLPELP----CNLGLLSARNCTS 661
            R+ + N   L+++PE  +   L  +T     +C  LQ  P+ P    C    LS  NC  
Sbjct: 849  RINVENCKRLQQLPELPATDELRVVT----DNCTSLQVFPDPPNLSRCPEFWLSGINCFR 904

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLKLDP-------------------NELSEIVKDGWMKH 702
                  G       LY  L   L++                     N +  +V++     
Sbjct: 905  ----AVGNQGFRYFLYSRLKQLLEVLSLSLCLSLPPSLPPLSLSLVNMMVCMVQE--TPW 958

Query: 703  SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV--- 759
            SLY  R     +  PG+EIP+WF +QS+G S   K   P  A  +K I  A C ++V   
Sbjct: 959  SLYYFR-----LVIPGSEIPEWFNNQSVGDSVIEKL--PSYACNSKWIGVALCFLIVPQD 1011

Query: 760  FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDH-VFLGCNSF 818
             P+ +   RH       D      CC W +   GH  S  + ++  + SDH +F+    F
Sbjct: 1012 NPSAVPEVRH------LDPFTRVFCC-WNKNCSGH--SRLVTRVKQIVSDHLLFVVLPKF 1062

Query: 819  GGEYFGPNYDEFSFRIHCSFHFPPYLERG-----EVKKCGIHFVYAQDSADHILK 868
                + P            F F      G     +VKKCG   +Y  D+ + I K
Sbjct: 1063 ---IWKPQNCPEDTCTEIKFVFVVDQTVGNSRGLQVKKCGARILYEHDTEELISK 1114


>gi|15242937|ref|NP_197661.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178243|dbj|BAB11675.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332005681|gb|AED93064.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 278/852 (32%), Positives = 428/852 (50%), Gaps = 109/852 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF GED R  F SH    L  K I  F D+ + R  ++   L   I  S IAI+
Sbjct: 9   LYDVFPSFSGEDVRVTFLSHFLKELDRKLISVFKDNDIQRSQSLDPELKLAIRDSRIAIV 68

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKR 98
           +FS+ YA+S W                      FY +DP HVRKQS  FG  F +  + +
Sbjct: 69  VFSKNYAASSWCLDELLEIVKCKEEFGQIVIPVFYGLDPCHVRKQSGEFGIVFENTCQTK 128

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVE 157
             +++++W+ ALT+ A++ GF S+    E+ ++E+IANDVL +L+ T  S + +G VG+E
Sbjct: 129 TDDEIQKWRRALTDVANILGFHSSNWDNEATMVEDIANDVLAKLNLTTTSNDFEGFVGIE 188

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREA 214
             I +I  +LC+  + V    IWG  GI K TIA A+F++ISRHF+GS F   A   +  
Sbjct: 189 GHIAKISLMLCLECKQVRMFGIWGPSGIGKTTIARALFSRISRHFQGSVFLDRAFVSKSM 248

Query: 215 E-ETGGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--- 261
           E  +GG  D       LQ K LSE+  +KD  + N+     RL   KV I  DD+     
Sbjct: 249 EIYSGGNVDNYNAKLHLQGKFLSEILRAKDIKISNLGVVGERLKHMKVLIFIDDLDDQVV 308

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+I+ T+DKQ  +       Y +       A ++F Q AF  +  
Sbjct: 309 LDALASKPHWFGCGSRIIVITKDKQFFRAHGIGLFYEVGLPSDKLALEMFSQSAFRQNSP 368

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
                EL  +  K +  +PLAL VLG +L GR KE W   + +L      +IE++L++ Y
Sbjct: 369 PPGFTELASEVSKRSGNLPLALNVLGSHLRGRDKEDWIDMLPRLRKGLDGKIEKILRVGY 428

Query: 369 DSLDD-SQKNVFLDIACFLEGEH--------RDEVISIFDASKSLINLDLFY----RIRM 415
           D L +   K +F  IAC   G           D  + +    K+L++  L       + M
Sbjct: 429 DELSNKDDKAIFRLIACLFNGAEISYIKLLLADSNLGVTIGLKNLVDKSLIRIGCDTVEM 488

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H +L++MGREIVR++SI  PG+R  L    DI  VL  NTGT+ + GIS DM+++  E+H
Sbjct: 489 HSMLQEMGREIVREQSIYEPGEREFLVDSTDILDVLNDNTGTKKVLGISFDMSEI-EELH 547

Query: 476 MNSYAFSKMPKLRFLRFY---GDKNKCMVSHL-EGVPF---AEVRHLEWPQCPLKTL--N 526
           ++  AF +MP LRFLRFY   G ++K    HL EG       +++ L W   P++ +  N
Sbjct: 548 IHKRAFKRMPNLRFLRFYKKLGKQSKEARLHLQEGFDKFFPPKLKLLSWDDYPMRRMPSN 607

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT----FEIIDCKMLERLPD--EL 580
             A  LV L+M  +K+E+LW  VQ           P+T     ++   K L+ +PD    
Sbjct: 608 FHAGYLVVLRMQHSKLEKLWQGVQ-----------PLTCLREMQLWGSKKLKEIPDLSLA 656

Query: 581 ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L +   +++ ELP S+  L+ +  L +     LE +P  I +L  L  L +  C 
Sbjct: 657 TNLETLYLNDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPTDI-NLKSLYRLDLGRCS 715

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLK-LDPN------- 689
           RL++ P++  N+  L   N T++E++P  +   S +  L +  C  LK + PN       
Sbjct: 716 RLKSFPDISSNISELYL-NRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHL 774

Query: 690 ---ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
              + S  +     + +L +++ + K + FPG ++P +F +Q+ GSS  +     + +  
Sbjct: 775 EMLDFSNCIATT-EEEALVQQQSVLKYLIFPGGQVPLYFTYQATGSSLAIPLSLHQSSLS 833

Query: 747 NKLISFAFCAVV 758
            +L+ F  C V+
Sbjct: 834 QQLLGFRACVVL 845


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 301/966 (31%), Positives = 457/966 (47%), Gaps = 183/966 (18%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRG+DTR+NFTSHL+  L+ + I  ++DD +L RG  I  +L   +E S  ++
Sbjct: 98  MYDVFLSFRGKDTRNNFTSHLYSNLAQRGIDVYMDDSELERGKTIETALWKAVEESRFSV 157

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IIFS  YASS W                      FY VDPS V K+   + + F    + 
Sbjct: 158 IIFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEVAKRKGQYEKAFVEHEQN 217

Query: 99  FPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F E   K++ WK+ L+  A+LSG+D    R ES+ I+ I   +  +L  T  + +K LVG
Sbjct: 218 FKENLEKVRNWKDCLSTVANLSGWDIRN-RNESESIKIIVEYIFYKLSVTLPTISKKLVG 276

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +E +   +   +     + I G+GGI K T+A  V+++I   FEGS F  NVREA 
Sbjct: 277 IDSRLEVLNGYIDEETGEAIFIGICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREAF 336

Query: 215 EETGGIKDLQKKLLSE-LSKDGNM----RNIESQLNRLARKKVRIVFDDVTS-------- 261
            E  G + LQ++LLSE L +  N+    R IE    RL RKK+ +V DDV          
Sbjct: 337 AEKDGRRHLQEQLLSEILMERANICDSSRGIEMIKRRLQRKKILVVLDDVDDHKQLESLA 396

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IIT+RDKQVL      + Y  ++L   DA  LF Q A   D      +
Sbjct: 397 AESKWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALTLFSQKALKNDQPAEDFV 456

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+ + + YA G+PLAL+V+G ++ GRS   W SA+ +L  IP  EI ++L+I +D L +
Sbjct: 457 ELSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNDIPDREIIDMLRIGFDGLHE 516

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFYRIRMHDLLRDMGREIVRKES 431
            +K +FLDIACFL+G  +D +I I D+    + I   +     +  + RD G+E +    
Sbjct: 517 LEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDQGKETIEAIF 576

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
           ++ PG +  LW+ K                                  AFSKM KLR L+
Sbjct: 577 LDMPGIKEALWNMK----------------------------------AFSKMTKLRLLK 602

Query: 492 FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDV 549
                +   +S        ++R LEW   P K+L   +  ++LV L M  + +EQLW   
Sbjct: 603 I----DNVQLSEGPEDLSNKLRFLEWNSYPSKSLPAGLQVDELVELHMANSSIEQLW--- 655

Query: 550 QRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLTVKG-TTIRELPESLGRL 603
                    +K+ +  +II+      L + PD   + NLE L ++G T++ E+  SL   
Sbjct: 656 -------YGYKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLIIEGCTSLSEVHPSLAHH 708

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN------------- 650
             ++ + L N  ++  +P ++  +  L    +  C +L+  P++  N             
Sbjct: 709 KKLQYMNLVNCKSIRILPNNL-EMESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETG 767

Query: 651 -------------LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
                        LGLLS  +C +LE +P+ +  + S+  ++L  C+ LK  P  L ++ 
Sbjct: 768 ITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSGCSELKYIPENLGKV- 826

Query: 696 KDGWMKHSLYEERGIKK-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLI 750
                  SL E  G+        +  PGNEIP WF HQS GSS +++     P+      
Sbjct: 827 ------ESLEEFDGLSNPRTGFGIAVPGNEIPGWFNHQSKGSSISVQV----PSW----- 871

Query: 751 SFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE--S 808
           S  F A V F A+        GE         + CD+K     +  S      + ++  S
Sbjct: 872 SMGFVACVAFSAY--------GE-------RPLRCDFKANGRENYPSLMCISCNSIQVLS 916

Query: 809 DHVFLGCNSFG--GEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGI-----HFVYAQD 861
           DH++L   SF    E     ++ FS  I  SFH   Y  R +VK CG+      ++  Q 
Sbjct: 917 DHIWLFYLSFDYLKELKEWQHESFS-NIELSFH--SYERRVKVKNCGVCLLSSLYITPQP 973

Query: 862 SADHIL 867
           S+ H +
Sbjct: 974 SSAHFI 979


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 310/961 (32%), Positives = 472/961 (49%), Gaps = 143/961 (14%)

Query: 8    FRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERY 66
            FRG+DTRDNFTSHL+  L  + I  ++DD +L RG  I  +L   IE S  ++IIFS+ Y
Sbjct: 99   FRGKDTRDNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSKDY 158

Query: 67   ASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE---K 102
            ASS W                      FY VDPS V +Q   + + F    + F E   K
Sbjct: 159  ASSPWCLDELVKIVQCMKEMGQSVLPVFYDVDPSEVAEQKGQYEKAFVEHEQNFKENLEK 218

Query: 103  MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
            ++ WK+ L+  A+LSG+D    R ES+ I+ I   +  +L  T  + +K LVG++  +E 
Sbjct: 219  VQNWKDCLSTVANLSGWDVRN-RNESESIKIIVEYISYKLSVTLPTISKKLVGIDSRVEV 277

Query: 163  IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIK 221
            +   +         + I G+GGI K T+A  V+++I   FEGS F  NVRE   E  G +
Sbjct: 278  LNGYIREEVGKAIFIGICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRR 337

Query: 222  DLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS--------------- 261
             LQ++LLSE+  +      + R IE    RL  KK+ ++ DDV                 
Sbjct: 338  RLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFG 397

Query: 262  -GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
             GSR+IIT+RDK+V+     N+ Y  K+L   DA  LF Q AF  DH     +EL+ + +
Sbjct: 398  PGSRIIITSRDKKVVTGNNNNRIYEAKKLNDDDALMLFSQKAFKNDHPTEDFVELSKQVV 457

Query: 321  KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
             YA G+PLAL+V+G +L  RS   W  A+ ++  IP   I +VL++S+D L +S K +FL
Sbjct: 458  GYANGLPLALEVIGSFLYDRSIPEWRGAINRMNEIPDGRIIDVLRVSFDGLHESDKKIFL 517

Query: 381  DIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIV 427
            DIACFL+G   D +  I  +              +SLI++    ++ MH+LL+ MG+EIV
Sbjct: 518  DIACFLKGFKIDRITRILQSRGFHAGIGIPVLIERSLISVSR-DQVWMHNLLQIMGKEIV 576

Query: 428  RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
            R ES   PG+R+RLW ++D+   L  NTG E IE I  DM  + +E   N  AFSKM +L
Sbjct: 577  RCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFFDMPGI-KEAQWNMKAFSKMSRL 635

Query: 488  RFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQL 545
            R L+     +   +S        ++  LEW   P K+L   +  ++LV L M  + ++QL
Sbjct: 636  RLLKI----DNVQLSEGPENLSNKLLFLEWHSYPSKSLPAGLQVDELVELHMANSNLDQL 691

Query: 546  WD--------DVQRLPSSLCTFKTPITFEIID--------CKMLERLPDEL---ENLEYL 586
            W          V  L +SL   KTP    I +        C  L  +   L   + L+Y+
Sbjct: 692  WYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYV 751

Query: 587  TVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--SHCERLQT 643
             +    ++R LP +L  +  +K  IL   S LE+ P+ + +++ L  L +  +  E L +
Sbjct: 752  NLMDCESVRILPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSS 810

Query: 644  LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMK 701
                   L +LS + C +L+ +P+ +  + S+  ++L  C+  +  P  L ++       
Sbjct: 811  SIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKV------- 863

Query: 702  HSLYEERGIKK-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
             SL E  G+        +  PGNEIP WF HQSMGSS +++     P+      S  F A
Sbjct: 864  ESLEEFDGLSNPRPGFGIAIPGNEIPGWFNHQSMGSSISVQV----PSW-----SMGFVA 914

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE--SDHVFLG 814
             V F A              +G   ++ C +K     +  S      +Y++  SDH++L 
Sbjct: 915  CVAFSA--------------NGESPSLFCHFKANGRENYPSPMCISCNYIQVLSDHIWLF 960

Query: 815  CNSFG--GEYFGPNYDEFSFRIHCSFH-FPPYLERGEVKKCGI-----HFVYAQDSADHI 866
              SF    E     ++ +S  I  SFH F P +   +VK CG+      ++  Q S+ H 
Sbjct: 961  YLSFDHLKELKEWKHESYS-NIELSFHSFQPGV---KVKNCGVCLLSSVYITPQPSSAHF 1016

Query: 867  L 867
            +
Sbjct: 1017 I 1017


>gi|297812011|ref|XP_002873889.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319726|gb|EFH50148.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 901

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 262/794 (32%), Positives = 407/794 (51%), Gaps = 94/794 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF GED R  F SHL     LK I+TF+D+ + RG  I   L+  I  S  A+++
Sbjct: 16  HHVFPSFSGEDVRRTFLSHLLKKFQLKGIRTFMDNDIERGQMIGPELIQAIRESRFAVVV 75

Query: 62  FSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMK 104
            S+ YASS+W                  FY V+PS V+     FG  F +  K  PEK+ 
Sbjct: 76  LSKTYASSKWCLDELVEIKEASKKVIPIFYNVEPSDVKNIGGEFGNEFEKACKEKPEKLD 135

Query: 105 RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE 164
           RW+ AL   AD++G  S     E+ +IE IA  + ++L++T    ++ LVG++  + E++
Sbjct: 136 RWREALVYVADIAGECSQNWVSEADMIENIAMSISEKLNSTPSRDSENLVGIDAHMREMD 195

Query: 165 SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD-- 222
           SLL + S  V  + IWG  GI K TIA A+FN++S +F+ + F  NV+ +     + D  
Sbjct: 196 SLLFLESTEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSYRRTDLDDYG 255

Query: 223 ----LQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT---------------- 260
               LQ++ LSE+    +M+  +  L   RL   KV +V DDV                 
Sbjct: 256 MKLRLQEQFLSEVIDHKHMKVHDLGLVKERLQDLKVLVVLDDVDKLEQLDALVKQSQWFG 315

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
           SGSR+I+TT +KQ+L+       Y +      ++ ++FC  AFG        I+L  +  
Sbjct: 316 SGSRIIVTTENKQLLRAHGIKLIYEVGFPSRGESLQIFCLSAFGQSSAPHGFIKLATEIT 375

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
           K A  +PLAL VLG  L G +K+  +SA+ +L    + +I+ VL++SYDSL +  K++FL
Sbjct: 376 KLAGYLPLALTVLGSSLRGMNKDEQKSALPRLRTSLNEDIKNVLRVSYDSLHERDKSIFL 435

Query: 381 DIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYR-IRMHDLLRDMGREI 426
            IAC   GE+ D V  +  +S             +SLIN+  F R I MH LL  +GRE+
Sbjct: 436 HIACLFNGENVDYVKQLLASSGLDVNFGLEVLTNRSLINISGFNRTIMMHTLLEQLGREV 495

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIE--GISLDMNKVNREIHMNSYAFSKM 484
           V ++SI  P KR  L    DI  VL  ++G  A+   GIS+D++K+N E ++N  AF+ M
Sbjct: 496 VYEQSIVEPRKRQFLVDASDICDVLFHDSGARAVSVLGISMDISKIN-EWYLNEEAFAGM 554

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFA------EVRHLEWPQCPLKTLNIC--AEKLVSLK 536
             L FLRFY   +      L  +P        ++R L W  CP+K++ +    E LV L 
Sbjct: 555 FNLMFLRFYKSPSSKDQPELNYLPLRLDYLPHKLRLLHWDACPMKSMPMSFRPEFLVVLN 614

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GTTI 593
           +  +++E+LW+    L S  C        ++   + L+ +PD  E  N+E L +    ++
Sbjct: 615 IRESQLEKLWEGAPPLRSLKC-------MDLSMSENLKEIPDLSEAVNIEELCLSYCRSL 667

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             LP S+  L+ +  L ++  SNLE  P +I+ L  L+ L +  C RL++ PE+  N+G 
Sbjct: 668 VLLPSSIKNLNKLVVLDMTYCSNLESFPSNIK-LESLSILNLDRCSRLESFPEISSNIGY 726

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
           LS    TS++ +PA ++S   +  +++  C +L   P  L E +K  W+  S  E +   
Sbjct: 727 LSLSE-TSIKNVPATVASWPYLEALDMSGCRYLDTFPF-LPETIK--WLDLSRKEIK--- 779

Query: 712 KSMYFPGNEIPKWF 725
                   E+P W 
Sbjct: 780 --------EVPLWI 785


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 259/764 (33%), Positives = 390/764 (51%), Gaps = 95/764 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFRGEDTR+NFT HL   L    IKTF DDQL RG+ I   LL TIE S I++++
Sbjct: 21  FEVFLSFRGEDTRNNFTDHLFVNLGRMGIKTFRDDQLERGEEIKSELLKTIEESRISVVV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKRF 99
           FS+ YA S+W                      FY VDP  VRKQ+ SFG  FS   R   
Sbjct: 81  FSKTYAHSKWCLDELAKIMECREEMEQMVFPVFYHVDPCDVRKQTGSFGEAFSIHERNVD 140

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVEC 158
            +K++RW+++LTEA+++SGF  N    ESK I+EI N + KR +++     N  +VG++ 
Sbjct: 141 AKKVQRWRDSLTEASNISGFHVND-GYESKHIKEIINQIFKRSMNSKLLHINDDIVGMDF 199

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++E++SLL         + I+G GGI K TIA  V+N+I   F G+ F  +VRE    G
Sbjct: 200 RLKELKSLLSSDLNDTRVVGIYGTGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKG 259

Query: 219 GIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVT------------- 260
               LQ++LL + +  D    NI   +N    RL  KKV IV DDV              
Sbjct: 260 CQLQLQQQLLHDTVGNDEEFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVAGSPK 319

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS +IITTR++ +L        ++  EL Y +A +LF Q AF  +     +++L++
Sbjct: 320 WFGPGSTIIITTRNQHLLVEYGVTISHKATELHYEEALQLFSQHAFKQNVPKEDYVDLSN 379

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             ++YAQG+PLALKVLG  L G + + W+SA  KL+  P  EI + L+IS+D LD SQK 
Sbjct: 380 CMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKLKKNPMKEINDALRISFDGLDPSQKE 439

Query: 378 VFLDIACFLEGEHRDEVISIFDASKSLINLD------------LFYRIRMHDLLRDMGRE 425
           VFLDIACF +GE +D V  I D     +  +            L   I+MHDL+++MG  
Sbjct: 440 VFLDIACFFKGECKDFVSRILDGCNLFVTCNIRVLCDRCLVTILNNVIQMHDLIQEMGWA 499

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL----------------DMNK 469
           I+R+E +  P K +RLW   DIY    K    E ++GI L                ++ +
Sbjct: 500 IIREECLGDPCKWSRLWDVDDIYDAFSKQERLEELKGIDLSNSKQLVKMPKFSSMSNLER 559

Query: 470 VN-------REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL 522
           +N       RE+H    +   +  L +L   G +   + S L  + F  +  L    CP 
Sbjct: 560 LNLEGCISLRELHP---SIGDLKSLTYLNLGGCEQ--LRSFLSSMKFESLEVLYLNCCP- 613

Query: 523 KTLNICAEKLVSLKMPCTKVEQL-WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--- 578
              N+     +   M C K   L    +Q LPSS+    +     +  C   ++ P+   
Sbjct: 614 ---NLKKFPEIHGNMECLKELYLNKSGIQALPSSIVYLASLEVLNLSYCSNFKKFPEIHG 670

Query: 579 ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
            +E L+ L    + I+ELP S+  L+ ++ L LS+ SN E+ PE   ++  L  L++  C
Sbjct: 671 NMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLERC 730

Query: 639 ERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
            + +  P+    +G L   +   + +++LP+ +  + S+  ++L
Sbjct: 731 SKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDL 774



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 32/235 (13%)

Query: 478  SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CA--EKLV 533
            S  F+ M +LR L  YG       S ++ +P   + +LE     L+ LN+  C+  EK  
Sbjct: 831  SDVFTNMGRLRELCLYG-------SGIKELP-GSIGYLE----SLEELNLRYCSNFEKFP 878

Query: 534  SLK--MPCTKVEQLWDD-VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLT 587
             ++  M C K+  L D  ++ LP+ +   +     ++  C  LER P+    + NL  L 
Sbjct: 879  EIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLF 938

Query: 588  VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
            +  T IR LP S+G L+ ++RL L N  NL+ +P SI  L  L  L ++ C  L+   E+
Sbjct: 939  LDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEI 998

Query: 648  PCNL----GLLSARNCTSLEKLPAG---LSSMSSVLYVNLCNFLKLDPNELSEIV 695
              ++    GL      T + +LP+    L  + S+  +N  N + L PN +  + 
Sbjct: 999  TEDMEQLEGLFLCE--TGISELPSSIEHLRGLKSLELINCENLVAL-PNSIGNLT 1050



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 7/127 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLE---RLPDELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  K+     +  C  LE    + +++E LE L +  T I ELP S+  L 
Sbjct: 967  NLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLR 1026

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             +K L L N  NL  +P SI +L+ LT L + +C +L  LP+   NL      +C+S E+
Sbjct: 1027 GLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPD---NLRSQQCISCSS-ER 1082

Query: 665  LPAGLSS 671
              +G +S
Sbjct: 1083 YDSGSTS 1089



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 54/334 (16%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++     +  C   E+ P+    ++ L+ L ++ T I+ELP  +GRL  
Sbjct: 850  IKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQA 909

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
            ++ L LS  SNLER PE  +++  L  LF+        +  LP ++G L+        NC
Sbjct: 910  LEILDLSGCSNLERFPEIQKNMGNLWGLFLDE----TAIRGLPYSVGHLTRLERLDLENC 965

Query: 660  TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKDGWMKHSLYE-ERGIKKSMYF 716
             +L+ LP  +  + S+  L +N C+ L+       EI +D      L+  E GI      
Sbjct: 966  RNLKSLPNSICGLKSLKGLSLNGCSNLE----AFLEITEDMEQLEGLFLCETGI------ 1015

Query: 717  PGNEIPKWFRHQSMGSSATL---KTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGE 773
              +E+P    H     S  L   +     P     L       V   P       +   +
Sbjct: 1016 --SELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSQ 1073

Query: 774  DDWDGNVYAVCCDWKRKSEGH-----LYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYD 828
                     + C  +R   G      L+  +  +I  + S +     N+F   ++   Y+
Sbjct: 1074 Q-------CISCSSERYDSGSTSDPALWVTYFPQIG-IPSKYRSRKWNNFKAHFYNRVYN 1125

Query: 829  -EFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
              F+   + SF         ++K CGIH +YAQD
Sbjct: 1126 ASFTCGENASF---------KMKSCGIHLIYAQD 1150



 Score = 45.8 bits (107), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 37/248 (14%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ LPSS+   ++    ++  C   E+ P+   N++ L    +  T I+ELP S+G L+ 
Sbjct: 756 IKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTS 815

Query: 606 VKRLILSNNSNLER-----------------------IPESIRHLSKLTFLFISHCERLQ 642
           ++ L L   S  E+                       +P SI +L  L  L + +C   +
Sbjct: 816 LEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFE 875

Query: 643 TLPELPCNLGLLS--ARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKD- 697
             PE+  N+  L       T++++LP G+  + ++  ++L  C+ L+  P    EI K+ 
Sbjct: 876 KFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLERFP----EIQKNM 931

Query: 698 GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           G +     +E  I+   Y  G+          + +   LK+ P    G   L   +    
Sbjct: 932 GNLWGLFLDETAIRGLPYSVGH--LTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGC 989

Query: 758 VVFPAFLK 765
               AFL+
Sbjct: 990 SNLEAFLE 997


>gi|357513281|ref|XP_003626929.1| TMV resistance protein N [Medicago truncatula]
 gi|355520951|gb|AET01405.1| TMV resistance protein N [Medicago truncatula]
          Length = 1071

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 262/793 (33%), Positives = 403/793 (50%), Gaps = 96/793 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAI 59
           +YDVF+SFRGEDTR  F SHL+  L+  +I+TF DD+ +R G+ +   +   IE S I+I
Sbjct: 10  IYDVFISFRGEDTRKTFVSHLYAALTNAAIRTFRDDKELRKGNKLEPEIKRAIEGSRISI 69

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRK 97
           ++ S  YA S W                      FY VDPSHVRK   +FG  F      
Sbjct: 70  VVLSPYYAGSSWCLNELVHILHCSHTYGQVVMPVFYHVDPSHVRKLEGNFGTIFELHAIH 129

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           R  E + +WK  LTE ++LSG+D N I  E +L+++I  D L +LD +  S  +  VG++
Sbjct: 130 REHELLSKWKTVLTEVSNLSGWDLNNISNEGELVKQIVEDTLAKLDISLLSITEYPVGLD 189

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREA-- 214
             +++I   +   S  VC + IWG+GG  K T A A++N+I   F+G + F  ++RE   
Sbjct: 190 SRVQQITKFIDHQSTEVCMIGIWGMGGSGKTTTAKAIYNQIRSRFKGRASFIESIREVCD 249

Query: 215 -EETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVT--------- 260
               G I   Q+ LL  L     + +I S +     RL  + V ++ DDVT         
Sbjct: 250 NNNRGVIPLQQQLLLDLLKIKQEIHSIASGITKIEKRLRGQTVFVILDDVTTSEQLKNLC 309

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGS +IITTRD ++LK+   +  + M E+    + +LFC  AF   +   S  
Sbjct: 310 ADPKLFGSGSVLIITTRDGRLLKSLSGDHIFTMTEMDEDQSLELFCWHAFQKPYPRYSFS 369

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           ELT   + Y  G+PLAL+VLG YL  R+   W SA+ KLE IP+ E++++L+ISYD L D
Sbjct: 370 ELTKNVVGYCGGLPLALEVLGSYLSKRTTREWRSALSKLEKIPNNEVQQILRISYDGLQD 429

Query: 374 -SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            +QK++FLDI CFL G++R +V  I +A              +SL+ ++   ++ MHDLL
Sbjct: 430 YTQKDIFLDICCFLIGKNRADVTEILNACGLHADIGISILIERSLLKVEKNNKLGMHDLL 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           RDMGR I  + SI    K  RLW H D+  VL K TGT  I G+ L   +  R I   + 
Sbjct: 490 RDMGRAIAGESSI----KDMRLWFHDDVLHVLSKKTGTYTIVGMILKYQRTGR-IIFGTD 544

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLE---GVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           +  +M KLR L+  G        HL    G+   ++R ++W +   K +  +   E LV 
Sbjct: 545 SLQEMQKLRLLKLDG-------VHLMGEYGLISKQLRWVDWQRSAFKFIPNDFDLENLVV 597

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
            ++  + + Q+W + + L       K  I   +   K L+  PD  +L NLE L +K   
Sbjct: 598 FELKHSNLRQVWQETKILD------KLKI-LNVSHNKYLKITPDFSKLPNLEKLIMKDCP 650

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-- 649
           ++ E+ +S+G L  +  + L + ++L  +P  I  L  +  L IS C ++  L E     
Sbjct: 651 SLSEVHQSIGDLKSLVLINLRDCTSLANLPREIYQLKSVKTLIISGCSKIDKLEEDILQM 710

Query: 650 -NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER 708
            +L  L A N T ++++P  +    S+ Y++LC +  L  +    ++   WM  +     
Sbjct: 711 ESLTTLIAAN-TGVKQVPFSIVRSKSIAYISLCGYKGLSSDVFPSLIW-SWMSPT---RN 765

Query: 709 GIKKSMYFPGNEI 721
            + +   F GN +
Sbjct: 766 SLSRISPFAGNSL 778


>gi|357449951|ref|XP_003595252.1| Heat shock protein [Medicago truncatula]
 gi|355484300|gb|AES65503.1| Heat shock protein [Medicago truncatula]
          Length = 1501

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 271/754 (35%), Positives = 393/754 (52%), Gaps = 117/754 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+NFT  L+  L    I TF D+ Q+ +G+ I+ +L   I+ S I I+
Sbjct: 81  YDVFISFRGIDTRNNFTRDLYDSLDQNGIHTFFDEKQIQKGEQITPALFQAIQQSRIFIV 140

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPS VR QS ++G    +  +RF
Sbjct: 141 VFSNNYASSTFCLNELALILDCSNTHGRLLLPVFYDVDPSQVRHQSGAYGEALKKQEERF 200

Query: 100 ---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               +K+++W++AL +AA++SG+   +  + E K I  I  +V K+++ T        V 
Sbjct: 201 CDDKDKVQKWRDALCQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTPLHVADNPVA 260

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFN-KISRHFEGSYFALNVRE 213
           +E  + E+ SLL IGS EG   + I+G GG+ K T+A AV+N +IS  F+G  F  ++RE
Sbjct: 261 LESPVLEVASLLGIGSHEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRE 320

Query: 214 AEETGGIKDLQKKLLSEL--SKD---GNM-RNIESQLNRLARKKVRIVFDDVT------- 260
                G+  LQ+ LLSE+   KD   GN+ R I     RL RKKV +V DDV        
Sbjct: 321 NAINHGLVQLQETLLSEILCEKDIRVGNVNRGISIIKRRLQRKKVLLVLDDVDKAKQIQV 380

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGS++IITTRDK +L        Y +K+L +  + +LF   AF    +D  
Sbjct: 381 LAGGHDWFGSGSKIIITTRDKHLLAIHEILNIYEVKQLNHEKSLELFNWHAFRNRKMDPC 440

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +++++A+ YA G+PLAL+V+G +L G+  +VW+SA+ K E I H +I EVLKISYD L
Sbjct: 441 YSDISNRAVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKISYDDL 500

Query: 372 DDSQKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIRMHD 417
           D+  K +FLDIACF              L G   +  I +    KSLI +D    +RMHD
Sbjct: 501 DEDDKGIFLDIACFYNSDEMSYAKEMLYLHGFSAENGIQVL-TDKSLIKIDGNGCVRMHD 559

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++DMGREIVR+ES   PGKR+RLW   DI  VL++NTGT+ +E I +D+   ++E+  +
Sbjct: 560 LVQDMGREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYN-DKEVQWS 618

Query: 478 SYAF-----SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAE 530
             AF      K+  +R  RF+    K   S         +R L+W   P ++L I    +
Sbjct: 619 GEAFKKMKKLKILIIRSARFFRGPQKLPNS---------LRVLDWSGYPSQSLPIDFNPK 669

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
           KL  L +                S L +FK PI                 E+L +L  +G
Sbjct: 670 KLNILSLH--------------ESYLISFK-PIKV--------------FESLSFLDFEG 700

Query: 591 TT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---E 646
              + ELP SL  L  +  L L + +NL  I +S+  L+KL  L    C  L+ L     
Sbjct: 701 CKLLTELP-SLSGLLNLGALCLDDCTNLITIHKSVGFLNKLVLLSTQRCNELEVLVPNIN 759

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           LP +L +L  R C+ L+  P  L  M ++  V L
Sbjct: 760 LP-SLEILDMRGCSCLKSFPEVLGVMENIRDVYL 792


>gi|296089531|emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 244/659 (37%), Positives = 367/659 (55%), Gaps = 62/659 (9%)

Query: 73  FYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR---WKNALTEAADLSGFDSNVIRPESK 129
           FY V+PSHV+KQ+ SF   F++  +   EKM++   W+ ALTE A +SG+DS   R ESK
Sbjct: 9   FYNVNPSHVKKQTGSFAEAFAKHEQENREKMEKVVKWREALTEVATISGWDSRD-RHESK 67

Query: 130 LIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKIT 189
           LIEEI  D+  +L  T  S  KGLVG+E  +E ++SLLCIGS  V  + IWG+ GI K T
Sbjct: 68  LIEEIVRDIWNKLVGTSPSYMKGLVGMESRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTT 127

Query: 190 IAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGN------MRNIESQ 243
           IA  ++ +I   FEG  F  NVRE     G+  LQ +LLS++ K+ N       + I   
Sbjct: 128 IAKVIYERIYTQFEGCCFLSNVREESYKHGLPYLQMELLSQILKERNPNAGLFNKGINFM 187

Query: 244 LNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMK 287
            + L  +KV I+ DDV                 SGSR+IITTRD+ +L     +  Y +K
Sbjct: 188 KDVLHSRKVLIILDDVDQRKQLEDLAGDNNWFGSGSRIIITTRDRHLLTCQEVDAIYEVK 247

Query: 288 ELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWES 347
           EL   +A KLFC +AF   H      +L   A+ Y  G+PLALKVLG  L  +    W+S
Sbjct: 248 ELDNDEALKLFCLYAFRHKHGTEDFRQLCGHALDYTSGLPLALKVLGSSLYTKGIHEWKS 307

Query: 348 AMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA------- 400
            + KL+  P+ E++ VLK S++ LDD+++N+FLDIA F +G  +D V  I D+       
Sbjct: 308 ELDKLKQFPNKEVQNVLKTSFEGLDDNEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGI 367

Query: 401 ------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
                  KSLI +    ++ MHDLL++MG EIVR++S   PG+R+RL  H+DI  VL  N
Sbjct: 368 GIRNLEDKSLITIS-ENKLCMHDLLQEMGWEIVRQKS-EVPGERSRLRVHEDINHVLTTN 425

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRH 514
           TGTEA+EGI LD++  ++E++ +  AF+KM +LR L+    +    + +L     ++   
Sbjct: 426 TGTEAVEGIFLDLS-ASKELNFSIDAFTKMKRLRLLKICNVQIDRSLGYL-----SKKED 479

Query: 515 LEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM 572
           L W   PLK+   N   EKLV L M  ++++Q W+  +        F+   + ++   + 
Sbjct: 480 LYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKK-------GFEKLKSIKLSHSQH 532

Query: 573 LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           L ++PD   + NL  L +KG T++ E+  S+G L  +  L L     L+    SI H+  
Sbjct: 533 LTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMES 591

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
           L  L +S C +L+  PE+  N+  L     + + + +LP+ +  ++ ++++NL N  KL
Sbjct: 592 LQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKL 650


>gi|357499339|ref|XP_003619958.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494973|gb|AES76176.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1109

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 261/792 (32%), Positives = 401/792 (50%), Gaps = 118/792 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           +YDVF+SFRG DTR  FT HL+  L  K I+TFIDD +L RGD I+ SLL +IE S IAI
Sbjct: 19  IYDVFISFRGIDTRSGFTGHLYKALCDKGIRTFIDDKELQRGDEITPSLLKSIEHSRIAI 78

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FSE YA+S +                      FY V+PSHVR Q++ +G   +   + 
Sbjct: 79  IVFSENYATSSFCLDELVHIINYFKEKGRLVLPVFYGVEPSHVRHQNNKYGEALTEFEEM 138

Query: 99  FP------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD-ATFQSKNK 151
           F       +++++WK AL +  +LSGF       E + I++I  ++ K+++    +  + 
Sbjct: 139 FQNNKENMDRLQKWKIALNQVGNLSGFHFKKDAYEYEFIKKIVTEISKKINRGLLEVADH 198

Query: 152 GLVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
            +VG+E  +  + SLL +G  +G C + I G GG+ K T+  A++N I+  F+G  F  +
Sbjct: 199 PIVGLESRLLHVMSLLDVGCDDGACMIGICGSGGLGKTTLTRALYNLIADQFDGLCFLHS 258

Query: 211 VREAEETGGIKDLQKKLLSE-LSKDGNMRNIESQL----NRLARKKVRIVFDDVTS---- 261
           VRE     G++ LQK+LLS+ L ++ N  ++   +    +RL +KKV ++ DDV      
Sbjct: 259 VRENSIKYGLEHLQKQLLSKTLGEEFNFGHVSEGIPIIKDRLHQKKVLLILDDVDKPKQL 318

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSRVIITTRD+ +L      + Y +  L   +A +LF + AF  + +D
Sbjct: 319 KVLVGEPGWLGPGSRVIITTRDRHLLSCHGITRIYDLDGLNDKEALELFIKMAFKSNIID 378

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
           +S+  + ++A+KY  G+PLA++V+G  L G+S E WES + K E  P  +I+ + K+S+D
Sbjct: 379 SSYDYILNRAVKYTSGLPLAIEVVGSNLFGKSIEEWESTLDKYERTPPEDIQNIFKVSFD 438

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIR- 414
           +LD  +K+VFLDI C  +G     V  I                  KSLI   + Y  R 
Sbjct: 439 ALDKEEKSVFLDIVCCFKGCPLAYVEKILHFHYGYCIKSHIGVLVEKSLIKTYIEYDWRR 498

Query: 415 --------MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
                   +HDL+   G+EIV++ES   PG+R+RLW   DI  VLK+N GT  IE I L+
Sbjct: 499 RPTNVIVTLHDLIEHTGKEIVQQESPEEPGERSRLWCQDDIVHVLKENIGTSKIEMIYLN 558

Query: 467 MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL- 525
               N EI  N  AF KM KL+ L     +      HL     + +R L+W + P +++ 
Sbjct: 559 FPTKNSEIDWNGKAFKKMTKLKTLIIENGQFSKGPKHLP----STLRVLKWNRYPSESMS 614

Query: 526 ----NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE 581
               N   EK+  LK+   +      DV  LP+        I+F+  +CK L R+ D + 
Sbjct: 615 SSVFNKTFEKMKILKIDNCEYLTNISDVSFLPN-----LEKISFK--NCKSLVRIHDSIG 667

Query: 582 NLEYLTVKG--------------------------TTIRELPESLGRLSWVKRLILSNNS 615
            L  L +                            T++++ PE LG++  +K++IL   +
Sbjct: 668 FLSQLQILNAADCNKLLSFPPLKLKSLRKLKLSGCTSLKKFPEILGKMENIKKIIL-RKT 726

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
            +E +P S  +L  LT L I  C +L     +   L LL        + LP    ++SS 
Sbjct: 727 GIEELPFSFNNLIGLTDLTIEGCGKLSLPSSILMMLNLLEVSIFGYSQLLPKQNDNLSST 786

Query: 676 LYVNLCNFLKLD 687
           L  N+ N L+L+
Sbjct: 787 LSSNV-NVLRLN 797


>gi|356559997|ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 264/748 (35%), Positives = 378/748 (50%), Gaps = 109/748 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L  K I TFIDD+ L RG+ I+++L+  I+ S +AI 
Sbjct: 16  YDVFLSFRGEDTRHAFTGHLYKALHDKGIHTFIDDEKLQRGEQITRALMEAIQDSRVAIT 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS +                      FY+VDPS VR Q  S+     +L  RF
Sbjct: 76  VLSQNYASSSFCLDELATILHCHQRKRLLVIPVFYKVDPSDVRHQKGSYAEALEKLETRF 135

Query: 100 ---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
              PEK+++WK AL + ADLSG+        E K IE+I   V + ++          VG
Sbjct: 136 QHDPEKLQKWKMALKQVADLSGYHFKEGDGYEFKFIEKIVERVSREINPRTLHVADYPVG 195

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNK--ISRHFEGSYFALNVR 212
           +E  + ++  LL  GS+ GV  + I G+GG+ K T+A AV+N+  I+  F+G  F  NVR
Sbjct: 196 LESRVLDVRRLLDAGSDDGVHMIGIHGMGGLGKSTLARAVYNELIIAEKFDGFCFLANVR 255

Query: 213 E-AEETGGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVTS---- 261
           E +++  G++ LQ+ LLSE+  + N+    +Q       +RL  KKV ++ DDV +    
Sbjct: 256 EKSDKKDGLEHLQRILLSEILGEKNISLTSTQQGISIIQSRLKGKKVLLILDDVNTHGQL 315

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS++IITTRD+Q+L     N+ Y MKEL   DA +L    AF  +  D 
Sbjct: 316 QAIGRRDWFGPGSKIIITTRDEQLLAYHEVNETYEMKELNQKDALQLLTWNAFKKEKADP 375

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           +++E+  + + YA G+PLAL+V+G +L G+S E WESA+++ + IP  EI +VL +S+D+
Sbjct: 376 TYVEVLHRVVAYASGLPLALEVIGSHLVGKSIEAWESAIKQYKRIPKKEILDVLTVSFDA 435

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-IRM 415
           L++ ++ VFLDIAC L+G    EV  I                  KSLI +      + M
Sbjct: 436 LEEEEQKVFLDIACCLKGWTLTEVEHILPGLYDDCMKHNIGVLVEKSLIKVSWGDGVVNM 495

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE-- 473
           HDL++DMGR I ++ S   PGKR RLW  KDI QVL  N+GT  I+ ISLD++   +E  
Sbjct: 496 HDLIQDMGRRIDQQRSSKEPGKRRRLWLTKDIIQVLDDNSGTSEIQMISLDLSLSEKETT 555

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           I  N  AF K+  L+ L     K     ++        +R LEW   P   L  N   ++
Sbjct: 556 IDWNGNAFRKIKNLKILFIRNGKFSKGPNYFP----ESLRVLEWHGYPSNCLPSNFPPKE 611

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           LV  K+  + +            S   F+     +   CK+L  +PD   L NLE L+  
Sbjct: 612 LVICKLSQSYITSF-----GFHGSRKKFRKLKVLKFDYCKILTEIPDVSVLVNLEELS-- 664

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
                                 +   NL  +  SI  L+KL  L    C +L T P  P 
Sbjct: 665 ---------------------FNRCGNLITVHHSIGFLNKLKILSAYGCSKLTTFP--PL 701

Query: 650 NLGLLSARN---CTSLEKLPAGLSSMSS 674
           NL  L       C+SLE  P  L  M +
Sbjct: 702 NLTSLEGLQLSACSSLENFPEILGEMKN 729



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 32/142 (22%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           +L  VK L L +N N   +PE ++ L  LT L +S C RLQ +  +P NL    AR C S
Sbjct: 830 QLDHVKTLSLRDN-NFTFLPECLKELQFLTRLDVSGCLRLQEIRGVPPNLKEFMARECIS 888

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
           L    + + S   +       FL                               FPG  I
Sbjct: 889 LSSSSSSMLSNQELHEAGQTEFL-------------------------------FPGATI 917

Query: 722 PKWFRHQSMGSSATLKTRPPRP 743
           P+WF HQS G S++   R   P
Sbjct: 918 PEWFNHQSRGPSSSFWFRNKFP 939


>gi|359493398|ref|XP_003634586.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 269/800 (33%), Positives = 408/800 (51%), Gaps = 93/800 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFRGEDTR+NFT HL   L    IKTF DDQL RG+ I   LL TIE S I+I++
Sbjct: 19  FEVFLSFRGEDTRNNFTDHLFVNLHGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKRF 99
           FS+ YA S+W                      FY +DP  VRKQ+ SFG  FS   R   
Sbjct: 79  FSKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHLDPCDVRKQTGSFGEAFSIHERNVD 138

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVEC 158
            +K++RW+++LTEA++LSGF  N    ESK I+EI N + +R +++     N  +VG++ 
Sbjct: 139 AKKVQRWRDSLTEASNLSGFHVNDGY-ESKHIKEIINQIFRRSMNSKLLHINDDIVGMDF 197

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++E++SLL      +  + I+G GGI K TIA  V+N+I   F G+ F  +VRE    G
Sbjct: 198 RLKELKSLLSSDLNDIRMVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKG 257

Query: 219 GIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVT------------- 260
               LQ++LL + +  D    NI   +N    RL  KKV IV DDV              
Sbjct: 258 YQLQLQQQLLHDTVGNDVEFSNINKGVNIIKSRLRSKKVLIVIDDVDRLQQLESVAGSPK 317

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS +IITTRD+ +L        ++   L Y +A +LF Q AF  +     +++L++
Sbjct: 318 WFGPGSTIIITTRDQHLLVEYGVTISHKATALHYEEALQLFSQHAFKQNVPKEDYVDLSN 377

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             ++YAQG+PLALKV+G  L G + + W+SA  KL+  P  EI +VL+IS+D LD SQK 
Sbjct: 378 CMVQYAQGLPLALKVVGSSLQGMTIDEWKSASDKLKKNPMKEINDVLRISFDGLDPSQKE 437

Query: 378 VFLDIACFLEGEHRDEVISIFDASK--SLINLDLFY----------RIRMHDLLRDMGRE 425
           VFLDIACF +GE +D V  I D     +  N+ + +           I+MHDL+ +MG  
Sbjct: 438 VFLDIACFFKGECKDFVSRILDGCNLFATCNIRVLHDRCLVTISDNMIQMHDLIHEMGWA 497

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+E    P K +RLW   DIY    +    E ++GI L     N +  +    FS MP
Sbjct: 498 IVREECPGDPCKWSRLWDVDDIYDAFSRQECLEELKGIDLS----NSKQLVKMPKFSSMP 553

Query: 486 KLRFLRFYGDKNKC----------MVSHLEGVPFAEVR----HLEWPQCPLKTLNICAE- 530
            L  L   G  + C           +++L      ++R     +++    +  LN C   
Sbjct: 554 NLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNL 613

Query: 531 ---KLVSLKMPCTKVEQLWDD-VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL 586
                +   M C K   L +  +Q LPSS+    +     + +C   E+ P    N+++L
Sbjct: 614 KKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFL 673

Query: 587 T---VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
               ++G       P++   +  ++RL L   S ++ +P SI +L  L  L IS C + +
Sbjct: 674 RELYLEGCPKFENFPDTFTYMGHLRRLHL-RKSGIKELPSSIGYLESLEILDISCCSKFE 732

Query: 643 TLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD-GW 699
             PE+  N+  L       T++++LP  + S++S+  ++L   LK +  + S++  + G 
Sbjct: 733 KFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFE--KFSDVFTNMGR 790

Query: 700 MKHSLYEERGIKKSMYFPGN 719
           ++       GIK+    PG+
Sbjct: 791 LRELCLHRSGIKE---LPGS 807



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLE---RLPDELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  K+     +  C  LE    + +++E LE L ++ T I ELP S+  L 
Sbjct: 918  NLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLR 977

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
             +K L L N  NL  +P SI +L+ LT L + +C +L  LP+    L C L +L    C 
Sbjct: 978  GLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCN 1037

Query: 661  SL-EKLPAGLSSMSSVLYVNLC-NFLKLDPNELSEIVK 696
             + E++P+ L  +S ++++N+  N ++  P  ++++ K
Sbjct: 1038 LMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCK 1075



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 28/191 (14%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   ++     +  C   E+ P+    ++ L+ L+++ T I+ELP S+GRL  
Sbjct: 801 IKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRLQA 860

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
           ++ L LS  SNLER PE  +++  L  LF+        +  LP ++G L+        NC
Sbjct: 861 LESLTLSGCSNLERFPEIQKNMGNLWALFLDE----TAIEGLPYSVGHLTRLDHLNLDNC 916

Query: 660 TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKDGWMKHSLY-EERGIKKSMYF 716
            +L+ LP  +  + S+  L +N C+ L+      SEI +D      L+  E GI      
Sbjct: 917 KNLKSLPNSICELKSLEGLSLNGCSNLE----AFSEITEDMEQLERLFLRETGI------ 966

Query: 717 PGNEIPKWFRH 727
             +E+P    H
Sbjct: 967 --SELPSSIEH 975



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTI--RELPESL 600
            +++  LP+S+       +  + +C  L  LPD L +L+     L + G  +   E+P  L
Sbjct: 988  ENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDL 1047

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
              LS +  L +S N  +  IP  I  L KL  L I+HC  L+ + ELP +LG + A  C 
Sbjct: 1048 WCLSLLVFLNISEN-RMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWIEAHGCP 1106

Query: 661  SLE 663
            SLE
Sbjct: 1107 SLE 1109



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 30/176 (17%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSW 605
           +Q LP+S+ +  +     +  C   E+  D   N   L  L +  + I+ELP S+G L  
Sbjct: 754 IQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKELPGSIGYLES 813

Query: 606 VKRLILSNNSNLERIPE-----------------------SIRHLSKLTFLFISHCERLQ 642
           ++ L LS  SN E+ PE                       SI  L  L  L +S C  L+
Sbjct: 814 LENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRLQALESLTLSGCSNLE 873

Query: 643 TLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
             PE+  N+G L A   + T++E LP  +  ++ + ++NL  C  LK  PN + E+
Sbjct: 874 RFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPNSICEL 929


>gi|357513731|ref|XP_003627154.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355521176|gb|AET01630.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1544

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 281/842 (33%), Positives = 422/842 (50%), Gaps = 174/842 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YD+F+SFRGEDTR NFT+ LH  L+  SI+++ID  L++GD +  +L   I+ S +++++
Sbjct: 8   YDLFISFRGEDTRTNFTAQLHRALTDSSIESYIDYSLVKGDEVGPALAKAIQDSHMSLVV 67

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA+S+W                      FY +DPSHVR Q  S+   F+R  +   
Sbjct: 68  FSENYATSKWCLDELLHILQCRKHHGQVVIPVFYNIDPSHVRHQKESYEMAFARYDRDLA 127

Query: 101 ------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 +K+  WK AL  AA++SG+DS   R +S++I++I  DVL++L   + ++ K LV
Sbjct: 128 HSKSQLDKVSEWKAALKLAANISGWDSRKYRDDSQVIDKIVEDVLQKLSLMYPNELKDLV 187

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            V+ + E+IE LL    + + ++ IWG+ GI K TIA  +F K   H++   F   V E 
Sbjct: 188 TVDENSEDIELLL----KTIPRIGIWGMSGIGKTTIAKQMFAKNFAHYDNVCFLEKVSED 243

Query: 215 EETGGIKDLQKKLLSELSK----DGNMRNIESQLN-RLARKKVRIVFDDVTSG------- 262
            E  G   ++ +LL EL K      ++  + + +  RL RKKV IV DDV +        
Sbjct: 244 SEKLGPIYVRNQLLRELLKREITASDVHGLHTFIKRRLFRKKVFIVLDDVDNASQLDDLC 303

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTRD+  L     ++ Y +K     D+ KLF   AF  DH    + 
Sbjct: 304 RVLGDLGPNSRLIITTRDRHTLSG-KVDEIYEVKTWRLKDSLKLFSLRAFKQDHPLKGYE 362

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAM----RKLEIIPHVEIEEVLKISYD 369
             +++A++ A GVPLAL+VLG +   R  E WES +     K E +P  +I++VLK SY+
Sbjct: 363 CFSERAVECAGGVPLALEVLGSHFHSRKPEFWESELNLYENKGESLP--DIQKVLKASYN 420

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            L   QK +FLDIA F +GE++D V  I DA              K+LI +    RI+MH
Sbjct: 421 GLSWRQKEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNSRIQMH 480

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DLL+ +  +IVR+E  N  GKR+RL   KDI  VL  N G +AIEGI  D+++   +I++
Sbjct: 481 DLLQKLAFDIVREE-YNDRGKRSRLRDAKDICDVLGNNKGNDAIEGIIFDLSQ-KLDINV 538

Query: 477 NSYAFSKMPKLRFLRFY--GDKNKCMVSHLEG--VPFAE-VRHLEWPQCPLKTL--NICA 529
            +  F  M KLRFL+F+    K K    HL    +PF + + +LEW   PLK+L     A
Sbjct: 539 QADTFKLMTKLRFLKFHIPKGKKKLGTVHLPENIMPFFDKLTYLEWNGYPLKSLPEPFHA 598

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD-------- 578
           E+L+ + +P + +E LW  +Q L          +  E ID   CK L  LPD        
Sbjct: 599 EQLIQISLPHSNIEHLWYGMQEL----------VNLEAIDLSECKQLRHLPDLSGALKLK 648

Query: 579 -----------------------------------------ELENLEYLTVKG-TTIREL 596
                                                     L +L+Y +VKG  +++E 
Sbjct: 649 QLRLSGCEELCEVRPSAFSKDTLDTLLLDRCTKLESLMGEKHLTSLKYFSVKGCKSLKEF 708

Query: 597 ---PESLGRLSWVKRLI---------LSN-------NSNLERIPESIRHLSKLTFLFISH 637
               +S+ RL   K  I         ++N       + NL  +P  + HL  LT L +S 
Sbjct: 709 SLSSDSINRLDLSKTGIKILHPSIGDMNNLIWLNLEDLNLTNLPIELSHLRSLTELRVSK 768

Query: 638 CE-----RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           C      +L+ L E    L LL  ++C +L +LPA +SS+ S+      + L+LD + + 
Sbjct: 769 CNVVTKSKLEALFEGLTLLRLLHLKDCCNLIELPANISSLESL------HELRLDGSSVE 822

Query: 693 EI 694
           E+
Sbjct: 823 EL 824



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 47/297 (15%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ELP ++  L  +  L L + S++E +P SI++LS+L    + +C +L+ LPELP ++   
Sbjct: 800  ELPANISSLESLHELRL-DGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEF 858

Query: 655  SARNCTSLEKLPA----GLSSMSSVLYVNLCN--FLKLDPNELSEIVKDGW--MKHSLYE 706
             A NCTSL  +       ++ +    Y++  N   L+LD   L  I +D    MK + + 
Sbjct: 859  QADNCTSLITVSTLKTFSINMIGQKKYISFKNSIMLELDGPSLDRITEDAMLTMKSAAFH 918

Query: 707  ERGIKKSMY-------------FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
               ++K  +              PG  +P+  +HQS  SS+            +  + F 
Sbjct: 919  NVLVRKYRFQTHSFNYNRAEVCLPGRRVPREIKHQSTTSSSI-------TINISNSLGFI 971

Query: 754  FCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE-GHLYSWFLGKISYVESDHVF 812
            F AVVV P+       K+ +  +   +   C     K E G+   W    I+ +  DHVF
Sbjct: 972  F-AVVVSPS------KKTQQHGYFVGMRCQCYTEDGKREVGYKSKWDHKPITSLNMDHVF 1024

Query: 813  LGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE-------VKKCGIHFVYAQDS 862
            +  + +   ++         +I   F    Y   G+       +K+CG+  +Y  +S
Sbjct: 1025 VWYDPY---HYDSILSSIERKISFKFCITTYTSSGKELDGLLSIKECGVCPIYYSES 1078


>gi|356503065|ref|XP_003520332.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 244/776 (31%), Positives = 390/776 (50%), Gaps = 88/776 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           MYDVF++FRGEDTR  F  H++  LS   I TFID++ I+       L+  IE S IAI+
Sbjct: 18  MYDVFINFRGEDTRKKFVCHIYKALSNAGINTFIDEENIQKGMTLDELMTAIEGSQIAIV 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR- 98
           +FS+ Y  S W                      FY +DPSH+R Q   FG   + + +R 
Sbjct: 78  VFSKTYTESTWCLRELQKIIECHENYGQRVVPVFYHIDPSHIRHQEGDFGSALNAVAERR 137

Query: 99  -----FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                    +  WK  L +A D SG++    R +++L++EI NDVL +L+       +  
Sbjct: 138 HSGEDLKSALSNWKRVLKKATDFSGWNERDFRNDAELVKEIVNDVLTKLEYEVLPITRFP 197

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+E  ++E+   +   +   C + IWG+GG  K T A A++N+I R F    F  ++RE
Sbjct: 198 VGLESQVQEVIRFIETTTYS-CIIGIWGMGGSGKTTTAKAIYNQIHRSFMDKSFIEDIRE 256

Query: 214 A--EETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVT------ 260
           A   + G I+ LQK+LLS++ K         R      NRL++K++ IV DDV       
Sbjct: 257 ACKRDRGQIR-LQKQLLSDVLKTKVEIHSIGRGTTVIENRLSKKRLLIVLDDVNKSGQLK 315

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS +IITTRDK +      +  + MKE+   ++ +L    AF       
Sbjct: 316 ALCGNLQWIGEGSVIIITTRDKHLFTGLKVDYVHEMKEMHANESLELLSWHAFREAKPKE 375

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              EL    + Y  G+PLAL+ LG YL  R+   W SA+ KLE  P+  ++E+LKIS+D 
Sbjct: 376 DFNELARNVVAYCGGLPLALEDLGLYLTNRTTNEWRSALSKLETTPNPHVQEILKISFDG 435

Query: 371 LDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
           L+D  +K++FLD+ CF  G+    V  I +               +SLI ++   ++ MH
Sbjct: 436 LNDEKEKDIFLDVCCFFIGKDIAYVTEILNGCGLHSDCGIPVLIDRSLIKVEKNNKLGMH 495

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           +L+++MGREI+R+ S   PGKR+RLW + ++  VL KNTGTE +EG++L  + VN     
Sbjct: 496 NLVQEMGREIIRQSSRKKPGKRSRLWFNVEVVDVLTKNTGTEVVEGLALKFH-VNSRNCF 554

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
            + AF KM +LR L+         ++   G    E+R + W   P K +  N   E +++
Sbjct: 555 KTCAFEKMQRLRLLQL----ENIQLAGDYGYLSKELRWMCWQGFPSKYIPKNFNMENVIA 610

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT 592
           + +  + +  +W +    P  L + K      +   K L   PD  +L NLE L +K   
Sbjct: 611 IDLKRSNLRLVWKE----PQDLASLK---ILNLSHSKYLTETPDFSKLRNLEKLILKDCP 663

Query: 593 -IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-- 649
            + ++ +S+G L  +  L L + ++L  +P S+  L  +  L +S C ++  L E     
Sbjct: 664 RLCKVHKSIGDLRNLILLNLKDCTSLGNLPRSVYKLKSVKTLILSGCSKIDKLEEDIVQM 723

Query: 650 -NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            +L  L A+N   ++++P  + ++ S+ Y++LC +  L  N    I+   WM  ++
Sbjct: 724 ESLTTLIAKNVV-VKEVPFSIVTLKSIEYISLCEYEGLSHNVFPSIIL-SWMSPTI 777


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 264/731 (36%), Positives = 374/731 (51%), Gaps = 133/731 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDT +N                     L RGD I  SLL  IE S +++I+
Sbjct: 16  YDVFISFRGEDTHNN---------------------LRRGDEICSSLLKAIEESKLSVIV 54

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR--KR 98
           FSE YASS+W                      FY V+PSHVR Q+ + G     L     
Sbjct: 55  FSENYASSKWCLDELVKILECKEMNGQTVIPVFYHVNPSHVRNQTETVGDSIGELELVTE 114

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             EK+KRW+ AL E A L+G+DS  IR ES+LIE IA D+L +L       +  LVG+E 
Sbjct: 115 KMEKVKRWRAALKEVATLTGWDSRNIRSESELIEAIAGDILNKLYKMSPGHSMNLVGIEE 174

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            I+  ESLLC+ S+                ++A A      R                  
Sbjct: 175 HIKRTESLLCMESQ-------------EPPSLAVAFTKDCLR------------------ 203

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNC 278
                +KK+L  L    N R    QL  L+      V D    GS++++T+RDKQVL   
Sbjct: 204 -----RKKVLIVLDDVDNSR----QLQELSLG----VHDLFGPGSKILVTSRDKQVLIKN 250

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
             +  Y+++ L   DA +L    AF  +     HIEL ++ + YA+G PLAL VLG  L 
Sbjct: 251 GVDAIYKVQGLNNHDALRLLSLNAFKKNCPKRDHIELLERMVDYAKGNPLALIVLGSSLY 310

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
            RSKE W SA+ KL  +P+ EI+ VL+ISYD LD  Q+ +FLDIA F  G   +  + + 
Sbjct: 311 DRSKEKWYSALNKLGKVPNPEIQRVLRISYDGLDGEQQQIFLDIAFFFNGAEWNHAVKVL 370

Query: 399 DASKSLINLDLFYRI------------RMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
           D+  S +  DL   I             MHD+L++M   IVR+ES N PGKR+RL  H+D
Sbjct: 371 DSCYSSLQFDLSILIDKSLITISQNTLEMHDILQEMAYSIVREESKN-PGKRSRLCDHED 429

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY------GDKNKCM 500
           IY VLKK  GTEA+EGI LD++K+  E+H+ S  F++M  LRFL+FY        K+K  
Sbjct: 430 IYHVLKKKKGTEAVEGICLDISKMP-EMHLESDTFARMNSLRFLKFYHPFYFMDSKDKVH 488

Query: 501 VSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL 556
           +  L G+ +   E+++L W + P K+L  N CAE +V L +  ++VEQLW  VQ L    
Sbjct: 489 LP-LSGLKYLSDELKYLHWHRFPAKSLPQNFCAENIVDLTLHSSRVEQLWTGVQDL---- 543

Query: 557 CTFKTPITFEIID---CKMLERLPD--ELENLEYLTVK-GTTIRELPESLGRLSWVKRLI 610
                 +    ID      L  +PD    +NLEY+ +    ++ E+  S+  L  ++ LI
Sbjct: 544 ------LNLRWIDLSRSTYLLEIPDLSRAKNLEYIDLSFCESLLEVHSSIQHLEKLEILI 597

Query: 611 LSNNSNLERIPESIRHLSK-LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGL 669
           LS   NL  +P+ I   SK L  L +SHC++++  PE+   L  L  +  T++E+LP  +
Sbjct: 598 LSGCKNLGIVPKRIE--SKFLRILDLSHCKKVRKCPEISGYLEELMLQG-TAIEELPQSI 654

Query: 670 SSMSSVLYVNL 680
           S +  +  ++L
Sbjct: 655 SKVKEIRILDL 665



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 151/327 (46%), Gaps = 39/327 (11%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRL 603
            + +  LP+ +C  K     E+  C  LE  P+ LE +E L    + GT I+ELP S+  L
Sbjct: 713  EQLSSLPTCICKLKCLERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFL 772

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
            S +  L L+   NL  +P  I  L  L +L +++C+ L +LPELP ++  L A  C SLE
Sbjct: 773  SCLYMLQLNRCDNLVSLPSFIEKLPVLKYLKLNYCKSLLSLPELPPSVEFLEAVGCESLE 832

Query: 664  KLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPK 723
             L  G    S+  Y+N  N  KLD   L   + D  MK    + R  + ++  PG+EIP 
Sbjct: 833  TLSIG--KESNFWYLNFANCFKLDQKPL---LADTQMKIQSGKMRR-EVTIILPGSEIPG 886

Query: 724  WFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF---PAFLKYFR------HKSGED 774
            WF  QSMGSS  +K     P   ++   FAF  V VF   P  L+  R      H  GE+
Sbjct: 887  WFCDQSMGSSVAIKL----PTNCHQHNGFAFGMVFVFPDPPTELQCNRIFICECHARGEN 942

Query: 775  DWDGNV---YAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFS 831
            D   +V    + C    R  E            +V+ D +         +Y G    E S
Sbjct: 943  DEHHDVIFNLSTCAYELRSVESDQMLLLYNPCEFVKRDCI--------SQYSG---KEIS 991

Query: 832  FRIHCSFHFPPYLE-RGEVKKCGIHFV 857
            F  +     P  L+ R +VK+CG++ +
Sbjct: 992  FEFY--LDEPSGLQNRCKVKRCGVYLL 1016



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 10/143 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           ++ LP S+   K     ++  C  + + P    N++ L +  T I E+P S+  L+ +  
Sbjct: 647 IEELPQSISKVKEIRILDLSGCSNITKFPQIPGNIKQLRLLWTVIEEVPSSIEFLATLGV 706

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC-----TSLE 663
           L ++    L  +P  I  L  L  L +S+C +L++ PE+   L  + +  C     T+++
Sbjct: 707 LEMNFCEQLSSLPTCICKLKCLERLELSYCPKLESFPEI---LEPMESLKCLDLSGTAIK 763

Query: 664 KLPAGLSSMSSV--LYVNLCNFL 684
           +LP+ +  +S +  L +N C+ L
Sbjct: 764 ELPSSIKFLSCLYMLQLNRCDNL 786


>gi|359493410|ref|XP_002279970.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1212

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 263/753 (34%), Positives = 380/753 (50%), Gaps = 135/753 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL+  L  K I TFIDD +L RG  IS +L+  IE S  +II
Sbjct: 151 YDVFLSFRGEDTRNNFTAHLYQELRTKGINTFIDDDKLERGRLISPALVTAIENSMFSII 210

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS+W                      FY VDPS V+KQ   FG   +   K  
Sbjct: 211 VLSENYASSKWCLEELAKILECMKTRGQRVLPIFYNVDPSDVKKQRGKFGAALAEHEKNL 270

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E M+R   WK+ALT+ A+LSG++S   + E  LI+EI   V  +L        + LVG+
Sbjct: 271 TENMERVQIWKDALTQVANLSGWESRN-KNELLLIKEIVKHVFNKLINICSGDTEKLVGI 329

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I+EI+  L + S+ V  + IWG+GGI K T+A A++N+ISR FE   F  +V +   
Sbjct: 330 DARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVLV 389

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
             G+  LQ+  L +L   KD N +       RL  KK  +V D+V               
Sbjct: 390 NKGLIKLQQIFLYDLLEEKDLNTKGFTFIKARLHSKKALVVLDNVNDPKILECLVGNWDW 449

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IIT RDK +L        Y++    Y +A+    + +   + L    +EL+ +
Sbjct: 450 FGRGSRIIITARDKHLLI-AHGVLCYQVPTFNYDEAYGFIKRHSLKHELLIGDFLELSKE 508

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I YA+G+PLALKVL   L G SK+   + + KL+   H +IEEVL+ISYD LDD +KN+
Sbjct: 509 MIDYAKGLPLALKVLCSSLFGMSKKERRNQLDKLKSTLHKKIEEVLRISYDGLDDKEKNI 568

Query: 379 FLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMGREI 426
           FLDIACF +GE +D VI I D          ++L+N  L      ++ MHDL+++MG EI
Sbjct: 569 FLDIACFFKGEDKDYVIEILDGCGFFSSCGIRTLVNKSLISIYGNKLEMHDLIQEMGIEI 628

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR++ +   GKR+RLW H+DI  VLKKNTG+E IEG+ L     +    +  Y+   +P 
Sbjct: 629 VRQQFVQELGKRSRLWFHEDIIDVLKKNTGSEKIEGLFL-----SSYFDLYGYSLKSLPN 683

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLW 546
                                                  +  A+ LV L MPC+ ++QLW
Sbjct: 684 ---------------------------------------DFNAKNLVHLSMPCSHIKQLW 704

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
             ++ L    C                     +L + +YL        E P +L R++ +
Sbjct: 705 KGIKVLEKLKCM--------------------DLSHSKYLI-------ETP-NLSRVTNL 736

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSLE 663
           +RL+L +  +L ++  S+R L  L FL   +C+ L++LP  P +L  L+      C+  E
Sbjct: 737 ERLVLEDCVSLCKVHPSLRDLKNLNFLSFKNCKMLKSLPSGPYDLKSLATLILSGCSKFE 796

Query: 664 KLPA--GLSSMSSVLYVNLCNFLKLDPNELSEI 694
           + P   G   M   LY +     +L P+ LS +
Sbjct: 797 QFPENFGYLEMLKKLYADGTALREL-PSSLSSL 828


>gi|356561818|ref|XP_003549175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1122

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 265/750 (35%), Positives = 375/750 (50%), Gaps = 107/750 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF G+DTR  FT +L+  L  + I TFIDDQ L RGD I  +L   I+ S IAI 
Sbjct: 50  YDVFLSFTGQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAIT 109

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S+ YASS +                     FY+VDPSHVR Q  S+G   ++ +KRF 
Sbjct: 110 VLSQNYASSSFCLDELVTILHCKSQGLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFK 169

Query: 101 ---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              EK+++W+ AL + ADLSG+   +    E + I  I  ++ ++            VG+
Sbjct: 170 ANKEKLQKWRMALHQVADLSGYHFKDGDSYEYEFIGSIVEEISRKFSRASLHVADYPVGL 229

Query: 157 ECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           E  + E+  LL +GS  V  +  I G+GG+ K T+A AV N I+ HF+ S F  NVRE  
Sbjct: 230 ESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREES 289

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS-------- 261
              G+K LQ  LLS+L  + ++     Q       +RL RKKV ++ DDV          
Sbjct: 290 NKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIV 349

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSRVIITTRDK +LK     + Y +K L  + A +L    AF  + +D S+ 
Sbjct: 350 GRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSYE 409

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           ++ ++ + YA G+PLAL+V+G  L  ++   WESAM   + IP  EI+E+LK+S+D+L +
Sbjct: 410 DVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALGE 469

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHDLL 419
            QKNVFLDIAC  +G    EV +I                  KSL+ +     + MHD++
Sbjct: 470 EQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMI 529

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--IHMN 477
           +DMGREI R+ S   PGK  RL   KDI QVLK NTGT  IE I LD +  ++E  +  N
Sbjct: 530 QDMGREIERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICLDFSISDKEETVEWN 589

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
             AF KM  L+ L        C  S         +R LEW + P   L  N     LV  
Sbjct: 590 ENAFMKMKNLKILII----RNCKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVIC 645

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTI 593
           K+P + +       +   SS  + K  + F+   C+ L ++PD  +L NL+ L+      
Sbjct: 646 KLPDSSITSF----EFHGSSKASLKI-LNFD--RCEFLTKIPDVSDLPNLKELS------ 692

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
                     +W + L+         + +SI  L+KL  L    C +L + P  P NL  
Sbjct: 693 ---------FNWCESLV--------AVDDSIGFLNKLKTLSAYGCRKLTSFP--PLNLTS 733

Query: 654 LSARN---CTSLEKLPAGLSSMSSVLYVNL 680
           L   N   C+SLE  P  L  M ++  + L
Sbjct: 734 LETLNLGGCSSLEYFPEILGEMKNITVLAL 763



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 59/143 (41%), Gaps = 32/143 (22%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           R + V  L L  N N   +PE  + L  LT L +  C+ LQ +  LP NL    ARNC S
Sbjct: 853 RFAHVGYLNLPGN-NFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPNLKHFDARNCAS 911

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
           L       SS  S+L                       +   L+E  GI+    FPG  I
Sbjct: 912 LT------SSSKSML-----------------------LNQELHEAGGIE--FVFPGTSI 940

Query: 722 PKWFRHQSMGSSATLKTRPPRPA 744
           P+WF  QS G S +   R   PA
Sbjct: 941 PEWFDQQSSGHSISFWFRNKFPA 963


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 263/742 (35%), Positives = 381/742 (51%), Gaps = 85/742 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTVIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  +ASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNFASSTWCLLELSKILECMEERGRILPIFYEVDPSHVRHQRGSFAEAFREHEEKFG 138

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT---FQSKNKGLV 154
              +K++ W++ALT+ A L+G+ S   R E +LI EI   +  ++  +   F S  K LV
Sbjct: 139 VGNKKVEGWRDALTKVASLAGWTSKDYRYEKELIREIVQALWSKVHPSLTVFGSSEK-LV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+   +EEI+ LL I +  V  + IWG+GG+ K T+A  V+ KIS  FE   F  NVRE 
Sbjct: 198 GMH-KLEEIDVLLDIEASDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVREV 256

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
             T G+  LQK++LS + K+ N +  N+ S +  + R    K V +V DDV         
Sbjct: 257 SATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVILVLDDVDQSEQLEHL 316

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+I TTR+++VL      K Y +K L  A+A +LF   AF     +  +
Sbjct: 317 AGEKDWFGLRSRIIFTTRNQRVLVTHGVEKPYELKGLNNAEALQLFSWKAFRKCEPEEDY 376

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL    + +A G+PLALK LG +L  RS + W SA+ KL   P   + ++LK+SYD LD
Sbjct: 377 AELCKSFVMHAGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDKTVFDMLKVSYDGLD 436

Query: 373 DSQKNVFLDIACF---LEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF    + +   E++  +D            +SL+ +     I MHDL+
Sbjct: 437 EMEKKIFLDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLLTISSNNEIGMHDLI 496

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           R+MG EIVR++S   PG  +RLW   DI+ V  KNTGTEAIEGI L ++K+  E   N  
Sbjct: 497 REMGCEIVRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKL-EEADWNPE 555

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPC 539
           AFSKM  L+ L  +  +       L       +R L+W   P K+L    +    L    
Sbjct: 556 AFSKMCNLKLLYIHNLRLSLGPKFLPDA----LRILKWSWYPSKSLPPGFQP-DELSFVH 610

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIREL 596
           + ++ LW+ +      L   K+ +    I+   L R PD   + NLE L ++G T + ++
Sbjct: 611 SNIDHLWNGI------LGHLKSIVLSYSIN---LIRTPDFTGIPNLEKLVLEGCTNLVKI 661

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS- 655
             S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE       LS 
Sbjct: 662 HPSIALLKRLKIWNFRNCKSIKTLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRLSK 720

Query: 656 -ARNCTSLEKLPAGLSSMSSVL 676
                T++EKLP+ +  +S  L
Sbjct: 721 LCLGGTAVEKLPSSIEHLSESL 742



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 133/305 (43%), Gaps = 44/305 (14%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
            E+P  +G LS ++ L L  N N   +P SI  L +L  + + +C+RLQ LPELP +  L 
Sbjct: 808  EIPNDIGSLSSLECLELGGN-NFVSLPASIHLLCRLGSINVENCKRLQQLPELPVSGSLR 866

Query: 654  LSARNCTSLE---KLPAGLSSMS--SVLYVNLCN---------FLKLDPNELSEIVKDGW 699
            ++  NCTSL+   +LP  L  +S  S+  VN  +         FL    N L E++    
Sbjct: 867  VTTVNCTSLQVFPELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVISLSL 926

Query: 700  MKHSLYEERGIKK------------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN 747
                                     +   PG+EIP+WF +QS G S T K   P  A  +
Sbjct: 927  SLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKL--PWDACNS 984

Query: 748  KLISFAFCAVVV---FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKIS 804
            K I FA CA++V    P+ +        + D D +   + C+W       +    L  + 
Sbjct: 985  KWIGFAVCALIVPQDNPSAVPE------DPDLDPDTCLISCNWSNYGINGVVGRGLC-VR 1037

Query: 805  YVESDHVFLGCNSFGGEYFGP-NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSA 863
              +SDH++L        +  P N  E +F    +          +VKKCG+  +Y QD+ 
Sbjct: 1038 QFDSDHLWLLV--LPSPFRKPKNCREVNFVFQTARAVGNN-RCMKVKKCGVRALYEQDTE 1094

Query: 864  DHILK 868
            + I K
Sbjct: 1095 ELISK 1099


>gi|357499349|ref|XP_003619963.1| Resistance gene analog protein [Medicago truncatula]
 gi|355494978|gb|AES76181.1| Resistance gene analog protein [Medicago truncatula]
          Length = 1247

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 274/777 (35%), Positives = 395/777 (50%), Gaps = 125/777 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR +FT +L+  LS   I+TFIDD+ L  GD I+ SLL  IE S I+I+
Sbjct: 22  YDVFISFRGTDTRFSFTGNLYKALSDNGIRTFIDDKDLQSGDEITPSLLKNIEDSRISIL 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+S +                      FY ++PSHVR Q+ S+G   ++  + F
Sbjct: 82  VFSENYATSSFCLDELVHIIHCSKEKGSMVIPVFYGIEPSHVRHQNSSYGEALAKHEEVF 141

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKG 152
                  E++++WK AL  AA+LSG   N     E   I +I  DV  +++         
Sbjct: 142 QNNKESMERLRKWKKALNHAANLSGHHFNFGNEYEHHFIGKIVKDVSNKINHVPLHVADY 201

Query: 153 LVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  I E+ SLL + S +GV K+ I G GG+ K T+A AV+N I+  FE   F  +V
Sbjct: 202 LVGLKSRISEVNSLLELESNDGVWKIGILGTGGMGKTTLAQAVYNSIADQFECKCFLHDV 261

Query: 212 REAEETGGIKDLQKKLLSEL----SKDGNM-RNIESQLNRLARKKVRIVFDDVTS----- 261
           RE     G++ LQ++LLS+     +K G++   I     RL++KKV ++ +DV       
Sbjct: 262 RENSLKHGLEFLQEQLLSKSIRFETKFGHVNEGIPVIKRRLSQKKVLLILNDVDKLNQLE 321

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +L +    K Y    L    A +L     F  +  DA
Sbjct: 322 NLVGEPGWLGHGSRVIITTRDKCLLSSHGIKKIYEAYGLNKEQALELVRTKTFKCNKTDA 381

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+  + ++A+KYA G+PLAL+V+G  L G+S E  ES + K E IPH +I+++L+ISYDS
Sbjct: 382 SYDYILNRAVKYASGLPLALEVVGSNLFGKSIEECESTLDKYERIPHADIQKILRISYDS 441

Query: 371 LDDSQKNVFLDIACFL---EGEHRDEV------------ISIFDASKSLI------NLDL 409
           LD+ Q++VFLDIACF    E E+  E+            I +    KSLI      N+  
Sbjct: 442 LDEEQQSVFLDIACFFKWHEKEYTQELLHGHYGYCIKSHIGVL-VDKSLIKFNSDPNVSE 500

Query: 410 FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK 469
           F  + +HDL+ DMG+EIVR+ESI  PG+R+RLW   DI  VL++NTG+  IE I L    
Sbjct: 501 FLAVTLHDLIEDMGKEIVRQESIKEPGRRSRLWCCDDIVHVLQENTGSSKIEMIILKYRP 560

Query: 470 VNRE-IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
                I MN  AF KM  L+ L    D       +L     + +R LEW     ++L+  
Sbjct: 561 STEPVIDMNEKAFKKMTNLKTLIVEDDNFSKGPKYLP----SSLRVLEWSGFTSESLSCF 616

Query: 529 AEK----LVSLKMPCTKVEQLWDDVQRLPS----------SLCTFKTPITF----EIID- 569
           + K    + +L +  +K      DV  LP+          SL T    I +    EI+D 
Sbjct: 617 SNKKFNNIKNLTLDGSKYLTHISDVSGLPNLEKLSFHCCHSLITIHNSIGYLIKLEILDA 676

Query: 570 --CKMLERLPD-------------------------ELENLEYLTVKGTTIRELPESLGR 602
             C  LE  P                          ++ N+E + +  T+I ELP S   
Sbjct: 677 WGCNKLESFPPLQLPSLKELILSRCSSLKNFPELLCKMTNIEEIELHRTSIGELPSSFKN 736

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
           LS ++ L +S   NL+ +PE +    +L  L +  C  L+ +  +P NL  LSA +C
Sbjct: 737 LSELRHLSIS-FVNLKILPECLSECHRLRELVLYGCNFLEEIRGIPPNLNYLSAIDC 792


>gi|356561214|ref|XP_003548878.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1320

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 262/763 (34%), Positives = 385/763 (50%), Gaps = 106/763 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD+ L +GD I+ +L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRYGFTGNLYNVLRERGIHTFIDDEELQKGDEITTALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YA S +                       FY+V+PS+VR    S+G     H  +
Sbjct: 68  VLSENYAYSSFCLNELTHILNFTEGKNDPLVLPVFYKVNPSYVRHHRGSYGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSGF----DSNVIRPESKLIEEIANDVLKRLDATFQSKN 150
           L     EK++ WK AL + +++SG     D N  + E K I+EI   V  + +       
Sbjct: 128 LNSNNMEKLETWKMALRQVSNISGHHLQHDGN--KYEYKFIKEIVESVSSKFNRDHLDVP 185

Query: 151 KGLVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
             LVG+E  + +++SLL +G + V  +  I G+ G+ K T+A AV+N I+ HFE S F  
Sbjct: 186 NVLVGLESPVRQVKSLLDVGRDDVVHMVGIHGLAGVGKTTLAVAVYNSIADHFESSCFLE 245

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVTS---- 261
           NVRE     G++DLQ   LS+ + +  + N    +     +L +KKV ++ DDV      
Sbjct: 246 NVRETTNKKGLEDLQSAFLSKTAGEIKLTNWREGITIIKCKLKQKKVLLILDDVDEHKQL 305

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HL 308
                       GSRVIITTRD+ +L        Y+++EL    A +L    AF  +  +
Sbjct: 306 QAIIGSPDWFGRGSRVIITTRDEHLLALHNVKITYKVRELNEKHALQLLTHKAFELEKEV 365

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++AI YA G+PLAL+V+G  L  +S E WESA+   E IP  +I ++LK+SY
Sbjct: 366 DPSYHDILNRAITYASGLPLALEVIGSNLLEKSIEEWESALDGYERIPDKKIYDILKVSY 425

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDL---FY 411
           D+L++ +KN+FLDIAC  +    +E+  I  A               KSLIN+     + 
Sbjct: 426 DALNEDEKNIFLDIACCFKAYKLEELQDILYAHYGHCMKYHIGVLVKKSLINIHGSWDYK 485

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            +R+HDL+ DMG+EIVR+ES  +PGKR+RLW H+DI QVL++N GT  IE I ++ +   
Sbjct: 486 VMRLHDLIEDMGKEIVRRESPTNPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSSFG 545

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            E+  +  AF KM  L+ L    D   C     + +P   +R LEW +CP +    N   
Sbjct: 546 EEVEWDGDAFKKMKNLKTLIIKSD---CFSEGPKHLP-NTLRVLEWWRCPSQDWPHNFNP 601

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
           ++L   K+P               SS  +      FE     +   + DE ++L      
Sbjct: 602 KQLAICKLP--------------DSSFTSVGLAPLFEKRLVNLTSLILDECDSL------ 641

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP- 648
                E+P+ +  LS ++ L      NL  I  S+  L KL  L    C  L++ P L  
Sbjct: 642 ----TEIPD-VSCLSNLENLSFRKCRNLFTIHHSVGLLEKLKILDAECCPELKSFPPLKL 696

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
            +L       C SLE  P  L  M ++  + L  C   KL P+
Sbjct: 697 TSLERFELWYCVSLESFPEILGKMENITQLCLYECPITKLPPS 739


>gi|449494799|ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 264/810 (32%), Positives = 410/810 (50%), Gaps = 110/810 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL++      I  F DD +L RG++IS  L   IE S +A++
Sbjct: 14  YDVFLSFRGEDTRKNFTDHLYYAFKDAGINVFRDDPELERGEDISSELERAIEGSKVAVV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSERYA S W                      FY VDPS VRKQ   F   F +   R+
Sbjct: 74  VFSERYAESGWCLEELVKIMECRRTLRQLVFPIFYNVDPSCVRKQKGEFEEAFVKHEVRY 133

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
              + R   W+ ALTEAA+LSG+D   I    E+K I  I   V K +++ +       V
Sbjct: 134 FRDIDRVLKWRMALTEAANLSGWDLRNIANGHEAKFIRLIVEKVSKEVNSKYLFIALYPV 193

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+E  ++ + S L IGS  V  + I G+GG+ K T+A A++N++  +FE   F  N++  
Sbjct: 194 GIESRLKLLLSHLHIGSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCFLSNIKA- 252

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIE-------------------------SQLNRL 247
            ET  +  LQK+LLS +  S + N+ NI+                         SQL  L
Sbjct: 253 -ETSNLIHLQKQLLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTAL 311

Query: 248 ARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
           A  +     D   SGSR+IITTRD+ +L     ++   + E+   +A +LF   AF   +
Sbjct: 312 ATSR-----DLFASGSRIIITTRDRHLLNQLEVDEICSIDEMDDDEALELFSWHAFRNSY 366

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              +  +L+ + + Y  G+PLAL+VLG +L GRS+E WE  ++KL+ IP+ +I++ LKIS
Sbjct: 367 PSETFHQLSKQVVTYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKKLKIS 426

Query: 368 YDSLDD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRI 413
           +D L+D + K++FLD++CF  G  R+ V  I D               + L+ +    R+
Sbjct: 427 FDGLNDHTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDKNRL 486

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDLLRDMGREIVR+    +P + +RL+ H+++  VL +  GT+A EG+SL + + +++
Sbjct: 487 MMHDLLRDMGREIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQ 546

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
             +++ AF++M KLR L+           H+      E+R + W   PLK L      +K
Sbjct: 547 -KLSTKAFNEMQKLRLLQLNFVDVNGDFKHIS----EEIRWVCWHGFPLKFLPKEFHMDK 601

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           LV++ +  +++   W + + L       K      +     L   P+  +L NLE L++K
Sbjct: 602 LVAMDLRYSQIRFFWKESKFL-------KNLKFLNLGHSHYLTHTPNFSKLPNLEILSLK 654

Query: 590 G--TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
                I  LP ++  L  ++ L+L N   L+ IP    HLS    L+ S+C  L+   +L
Sbjct: 655 DCKNLIEFLPSTISGLLKLETLLLDNCPELQLIPNLPPHLSS---LYASNCTSLERTSDL 711

Query: 648 PC--NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHS 703
                +G LS  NC  L ++P     + S+  +++  C+ +    N   + +  GW    
Sbjct: 712 SNVKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHMEGCSNMS---NSFKDTILQGWTVSG 768

Query: 704 LYEERGIKKSMYFPGNEIPKWFRHQSMGSS 733
                     +  PG E+P WF ++   S+
Sbjct: 769 F-------GGVCLPGKEVPDWFAYKDEVST 791


>gi|449483059|ref|XP_004156482.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like,
           partial [Cucumis sativus]
          Length = 786

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 257/763 (33%), Positives = 417/763 (54%), Gaps = 90/763 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG+DTR NFT HL   L  K +  FIDD L RG+ IS++L   I+ + I+I+I
Sbjct: 22  FDVFLSFRGDDTRSNFTGHLDMALRQKGVNVFIDDMLKRGEQISETLSKAIQEALISIVI 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY+VDPS VRKQ+  FG   ++ +  F 
Sbjct: 82  FSQNYASSSWCLDELVKIVECKKSKGQLVLPIFYKVDPSDVRKQTGCFGEALAKHQANFM 141

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVGVEC 158
           EK + W++ALT  A+ SG+D    R E+  I+++  +VL RL+         K  VG++ 
Sbjct: 142 EKTQIWRDALTTVANFSGWDLGT-RKEADFIQDLVKEVLSRLNCANGQLYVAKYPVGIDS 200

Query: 159 SIEEIESL---LCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
            +E+++ L   +    +GV  + I+GIGGI K T+A A++NKI+  FEG  F  NVRE +
Sbjct: 201 QLEDMKLLSHQIRDVFDGVYMMGIYGIGGIGKTTLAKALYNKIANQFEGFCFLSNVRETS 260

Query: 215 EETGGIKDLQKKLLSELSK-DGNMRNIESQLN----RLARKKVRIVFDDVTS-------- 261
           ++  G+  LQ+KLL E+ K D  + N++  +N    RL  KKV IV DDV +        
Sbjct: 261 KQFNGLVQLQEKLLYEILKFDLKIGNLDEGINIIRSRLRSKKVLIVLDDVDNLKQLEALV 320

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS++I+TTR+  +L +   ++KY ++EL +  + +LF   AF   H  ++++
Sbjct: 321 GERDWFGHGSKIIVTTRNSHLLSSHEFDEKYGVRELSHGHSLELFSWHAFKKSHPSSNYL 380

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+ +AI Y +G PLAL VLG +LC R +  W + + + E     +IE +++IS+D L++
Sbjct: 381 DLSKRAINYCKGHPLALVVLGSFLCTRDQIKWRTILDEFENSLSEDIEHIIQISFDGLEE 440

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASK--------SLINLDLFY----RIRMHDLLRD 421
             K +FLDI+C   GE  + V S+ +            L++L L       ++MHDL+R 
Sbjct: 441 KIKEIFLDISCLFVGEKVNYVKSVLNTCHFSLDFGIIVLMDLSLITVENEEVQMHDLIRQ 500

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG++IV  ES   PGKR+RLW   D+ +V   N+GT A++ I LD++   R + ++S AF
Sbjct: 501 MGQKIVNGESF-EPGKRSRLWLVHDVLKVFADNSGTIAVKAIKLDLSNPTR-LDVDSRAF 558

Query: 482 SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPC 539
             M  LR L     +N    +++E +P   ++ ++W     +   L+   + LV L +  
Sbjct: 559 RNMKNLRLLIV---RNARFSTNVEYLP-DNLKWIKWHGFSHRFLPLSFLKKNLVGLDLRH 614

Query: 540 TKVEQL---WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTI 593
           + +  L   + D +RL     ++ +          +LE++PD     NLE L +   T +
Sbjct: 615 SLIRNLGKGFKDCKRLKHVDLSYSS----------LLEKIPDFPATSNLEELYLNNCTNL 664

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNL 651
           R +P+S+  L  +  L L + SNL ++P S   L  L  L +++C++L+ LP+     NL
Sbjct: 665 RTIPKSVVSLGKLLTLDLDHCSNLIKLP-SYLMLKSLKVLKLAYCKKLEKLPDFSTASNL 723

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
             L  + CT+L  +   + S+S ++ ++L  C+ L+  P+ L+
Sbjct: 724 EXLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT 766



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 5/99 (5%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVK 607
           +LPS L   K+    ++  CK LE+LPD     NLE L +K  T +R + +S+G LS + 
Sbjct: 690 KLPSYL-MLKSLKVLKLAYCKKLEKLPDFSTASNLEXLYLKECTNLRMIHDSIGSLSKLV 748

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            L L   SNLE++P S   L  L +L ++HC++L+ +P+
Sbjct: 749 TLDLGKCSNLEKLP-SYLTLKSLEYLNLAHCKKLEEIPD 786


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 274/819 (33%), Positives = 415/819 (50%), Gaps = 144/819 (17%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            Y+VFLSFRG+DTR NFT HL+  LS K I+TF  D   +G+ I  + L  IE S   ++I
Sbjct: 225  YEVFLSFRGQDTRQNFTDHLYAALSQKGIRTFRMDH-TKGEMILPTTLRAIEMSRCFLVI 283

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
             S+ YA S+W                      FY V+PS VR Q  S+G   +   ++ P
Sbjct: 284  LSKNYAHSKWCLDELKKIMESRRQMGKLVFPVFYHVNPSDVRNQGESYGEALANHERKIP 343

Query: 101  -EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             E  +R + AL E  +LSG+   N    ES  IE+I   +L +        +K L+G++ 
Sbjct: 344  LENTQRMRAALREVGNLSGWHIQNGF--ESDFIEDITRVILMKFSQKLLQVDKNLIGMDY 401

Query: 159  SIEEIE----SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
             +E++E     ++   S  V  + I+G GGI K T+A  ++N+I   F  + F  NVRE 
Sbjct: 402  RLEDMEEIFPQIIDPLSNNVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 461

Query: 215  EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDVTS------- 261
             ++ G+  LQK+LL + L K  N +RN++  +    +RL  KKV +V DDV         
Sbjct: 462  SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEAL 521

Query: 262  ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     GSR+I+TTRDK +L+    +  Y  K+L + +A +LFC  AF  +H    +
Sbjct: 522  AGDHNWFGPGSRIIVTTRDKHLLEVHEMDALYEAKKLDHKEAVELFCWNAFKQNHPKEDY 581

Query: 313  IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
              L++  + Y  G+PL LKVLGC+L G++   WES ++KL+  P+ EI+ VLK SYD LD
Sbjct: 582  KTLSNSVVHYVNGLPLGLKVLGCFLYGKTICQWESELQKLQREPNQEIQRVLKRSYDVLD 641

Query: 373  DSQKNVFLDIACFLEGEHRDEVISIFDA----SKSLINL--------DLFYRIRMHDLLR 420
             +Q+ +FLD+ACF  GE +D V  I DA    +KS I +         L  +I MHDLL+
Sbjct: 642  YTQQQIFLDVACFFNGEDKDFVTRILDACNFYAKSGIGVLGDKCFITILDNKIWMHDLLQ 701

Query: 421  DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
             MGR+IVR+E    PGK +RL + + + +VL +  GTEAIEGI L+++++ R IH+ + A
Sbjct: 702  QMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKMGTEAIEGILLNLSRLTR-IHITTEA 760

Query: 481  FSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL------- 525
            F  M  LR L+ Y D         NK  +S     P  E+R+L W   PL++L       
Sbjct: 761  FVMMKNLRLLKIYWDLESAFMREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYAE 820

Query: 526  ------------------NICAEKLVSLKMPCTK--------------VEQLWDD----- 548
                              ++  EKL ++++ C++              +E+L  D     
Sbjct: 821  DLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSL 880

Query: 549  VQRLPS----------------SLCTFKTPI---TFEIID---CKMLERLPD---ELENL 583
            ++  PS                 L  F + I     EI++   C  L++ P+    +ENL
Sbjct: 881  LEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSSCSGLKKFPNIQGNMENL 940

Query: 584  EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
              L +  T I ELP S+G L+ +  L L    NL+ +P SI  L  L  L +S C +L++
Sbjct: 941  LELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSKLES 1000

Query: 644  LPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
             PE+  N+  L     + T +E LP  +  +  ++ +NL
Sbjct: 1001 FPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNL 1039



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 27/182 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDTR NFT HL+  L  K I+TF D ++L RG+ I+  LL  IE S I ++
Sbjct: 26  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHEELRRGEEIAAELLKAIEESRICVV 85

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA SRW                      FY+VDPS+VRKQ  S+    +   +  
Sbjct: 86  ILSKNYARSRWCLDELVKIMGWKKCMGQLVLPIFYQVDPSNVRKQKGSYEEALADHERNA 145

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            E    K+KRW+ AL     +SG+      PE+ +IEEI + + K L+       K LVG
Sbjct: 146 DEEGMSKIKRWREALWNVGKISGWCLKN-GPEAHVIEEITSTIWKSLNRELLHVEKNLVG 204

Query: 156 VE 157
           ++
Sbjct: 205 MD 206



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 22/108 (20%)

Query: 5    FLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAIIIFS 63
            F SFRGEDT ++FT+HL+  L  K I TFID D+L RGD I+ +L+  IE S  ++I+ S
Sbjct: 1500 FRSFRGEDTCNSFTTHLYKELCTKGINTFIDNDKLERGDVIASTLVAAIENSKFSVIVLS 1559

Query: 64   ERYASSRW---------------------FFYRVDPSHVRKQSHSFGR 90
            E YASSRW                      FY VDPSH+R     F R
Sbjct: 1560 ENYASSRWCLEELVKILECIRTKGQRVLPIFYNVDPSHIRYHKRKFWR 1607



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 144/343 (41%), Gaps = 76/343 (22%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPSS  +F++    +I DCK++E                     +P  +  L  +K+L 
Sbjct: 1141 RLPSSFSSFRSLSNLDISDCKLIEG-------------------AIPNGICSLISLKKLD 1181

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N N   IP  I  L+ L  L +  C+ L  +PELP ++  + A NCT+L  LP G S
Sbjct: 1182 LSRN-NFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTAL--LP-GSS 1237

Query: 671  SMSSVLYVNLCNF-----------------LKLDPN-------ELSEIVKDGWMKHSLYE 706
            S+S++  +    +                 L++ P+         S +     M   L E
Sbjct: 1238 SVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASESSVTTSPVMMQKLLE 1297

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLK 765
               I  S+ FPG  IP W  HQ++GSS  +K + P     +  + FA C+V+   P  + 
Sbjct: 1298 --NIAFSIVFPGTGIPDWIWHQNVGSS--IKIQLPTDWYSDDFLGFALCSVLEHLPERII 1353

Query: 766  YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEY 822
               +    D  D            K  GH + W  G I  V S+HV+LG   C+      
Sbjct: 1354 CHLNSDVFDYGD-----------LKDFGHDFHW-TGNI--VGSEHVWLGYQPCSQLRLFQ 1399

Query: 823  FGP----NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            F      N+ E SF     F+         VKKCG+  +YA+D
Sbjct: 1400 FNDPNEWNHIEISFEAAHRFNSSA---SNVVKKCGVCLIYAED 1439



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  K+     +  C  LE  P+    ++NL+ L + GT I  LP S+ RL 
Sbjct: 973  NLKSLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLK 1032

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
             +  L L    NL  +   + +L+ L  L +S C +L  LP    NLG L
Sbjct: 1033 GLILLNLRKCKNLVSLSNGMCNLTSLETLIVSGCSQLNNLPR---NLGSL 1079


>gi|356559373|ref|XP_003547974.1| PREDICTED: TMV resistance protein N isoform 2 [Glycine max]
          Length = 1097

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 262/765 (34%), Positives = 386/765 (50%), Gaps = 107/765 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD+ L +G  I+++L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+VDPS VR    SFG     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L+  + EK++ WK AL + ++ SG  F  +  + E   I+EI   V  + +      +  
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  +  ++SLL +G++ V  +  I G+GG+ K T+A AV+N I+ HFE   F  NV
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMRNIESQLN------RLARKKVRIVFDDVTS---- 261
           RE     G++ LQ  LLS+   D  +    S+        +L  KKV +V DDV      
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-L 308
                       GSRVIITTRD+Q+L      + Y+++EL    A +L  Q AFG +  +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++A+ YA G+PLALKV+G  L G+S E WES +   E  P   I   LK+SY
Sbjct: 368 DPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-- 412
           D+L++ +K++FLDIAC  +     +V  I  A               KSLIN+   +   
Sbjct: 428 DALNEDEKSIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDK 487

Query: 413 --IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             +R+HDL+ D+G+EIVR+ES   PGKR+RLW H+DI +VL++  GT  IE I ++ +  
Sbjct: 488 EVMRLHDLIEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKGTGKIEIICMNFSSF 547

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
            +E+  +  A  KM  L+ L     K+ C     + +P + +R LEW +CP + L  N  
Sbjct: 548 GKEVEWDGDALKKMENLKTLII---KSACFSKGPKHLPNS-LRVLEWWRCPSQDLPHNFN 603

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID-CKMLERLPDELENLEYLT 587
            ++L   K+P +    L      L          +T  I+D C  L  +PD         
Sbjct: 604 PKQLAICKLPHSNFTSL-----GLAPLFDKSVVNLTSLILDECDSLTEIPD--------- 649

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
                       +  LS +++L   +  NL  I  S+  L KL  L    C  L++ P L
Sbjct: 650 ------------VSCLSKLEKLSFKDCRNLFTIHPSVGLLEKLKILDAKGCPELKSFPPL 697

Query: 648 P-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
              +L  L    C+SLE  P  L  M ++  ++L  C   KL P+
Sbjct: 698 KLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPS 742



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 107/277 (38%), Gaps = 64/277 (23%)

Query: 502 SHLEGVP-----FAEVRHLEWPQCPLKTL-----NICAEKLVSLKMPCTKVEQLWD-DVQ 550
           S LE  P        +  L+  +CP+  L     N+   + + L       +QL D D  
Sbjct: 711 SSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQELELDHGPESADQLMDFDAA 770

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERL-PDELENLEYLTVKGTTIRELPESLGR------L 603
            L S++C    P  ++I   ++  RL PD+   L+  +V  +++  L   L        L
Sbjct: 771 TLISNICMM--PELYDISARRLQWRLLPDD--ALKLTSVVCSSVHSLTLELSDELLPLFL 826

Query: 604 SW---VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
           SW   V+ L L   S    IPE I+    L+ L +S C+RLQ +  +P NL   +A    
Sbjct: 827 SWFVNVENLRL-EGSKCTVIPECIKECRFLSILILSGCDRLQEIRGIPPNLERFAATESP 885

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE 720
            L       SS+S +L                E+ + G    SL            P  +
Sbjct: 886 DLTS-----SSISMLLN--------------QELHEAGHTDFSL------------PILK 914

Query: 721 IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           IP+WF  QS G S     R   PA         FC V
Sbjct: 915 IPEWFECQSRGPSIFFWFRNEFPA-------ITFCIV 944


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score =  345 bits (884), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 274/827 (33%), Positives = 415/827 (50%), Gaps = 126/827 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFTSHL   L+ + I  ++DD +L RG  I  +L   IE S  ++I
Sbjct: 117 YDVFLSFRGKDTRNNFTSHLQTNLAQRGIDAYMDDRELERGKTIEPALWKAIEESRFSVI 176

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YASS W                      FY VDPS   +++  F  H    ++  
Sbjct: 177 IFSRDYASSPWCLDELVKIVQGMKEMGHTVLPVFYDVDPSETYEKA--FVEHEQNFKENL 234

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            EK++ WK+ L+   +LSG+D    R ES+ I+ IA  +  +L  T  + +K LVG++  
Sbjct: 235 -EKVQIWKDCLSTVTNLSGWDIRN-RNESESIKIIAEYISYKLSVTLPTISKKLVGIDSR 292

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETG 218
           +E +   +         + I G+GGI K T++  ++++I   FEGS F  NVRE   E  
Sbjct: 293 VEVLNGYIGEEVGEAIFIGICGMGGIGKTTVSRVLYDRIRWQFEGSCFLANVREVFAEKD 352

Query: 219 GIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTSG----------- 262
           G + LQ++LLSE+  +      + R IE    RL  KK+ ++ DDV              
Sbjct: 353 GPRRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPG 412

Query: 263 -----SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
                SR+IIT+RDK V       K Y  ++L   DA  LF Q AF  D      +EL+ 
Sbjct: 413 WFGPRSRIIITSRDKNVFTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSK 472

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + YA G+PLAL+V+G +L GRS   W  A+ ++  IP  +I +VL+IS+D L +S + 
Sbjct: 473 QVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMHEIPDCKIMDVLRISFDGLHESDQK 532

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACFL+G  +D +  I D+              +SLI++    ++ MH+LL+ MG+
Sbjct: 533 IFLDIACFLKGFKKDRITRILDSCGFNAGIGIPVLIERSLISV-YGDQVWMHNLLQIMGK 591

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR E    PGKR+RLW ++D+   L  NTG E IE I LDM  + +E   N  AFSKM
Sbjct: 592 EIVRCEDPKEPGKRSRLWTYEDVSLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKM 650

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
            +LR L+     +   +S        E+R LEW   P K+L   +  + LV L M  + +
Sbjct: 651 SRLRLLKI----DNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSI 706

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLTVKG-TTIREL 596
           EQLW             K+ +  ++I+      L + PD   + NL  L ++G T++ E+
Sbjct: 707 EQLWYGC----------KSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEV 756

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---- 652
             SLGR   ++ + L N  +   +P ++  +  L    +  C +L+  P++  N+     
Sbjct: 757 HPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVGNMNCLME 815

Query: 653 ----------------------LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
                                 +LS  NC +LE +P+ +  + S+  ++L  C+ LK  P
Sbjct: 816 LCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIP 875

Query: 689 NELSEIVKDGWMKHSLYEERGIKK-----SMYFPGNEIPKWFRHQSM 730
             L ++        SL E  G+        + FPGNEIP WF H+ +
Sbjct: 876 ENLGKV-------ESLEEFDGLSNPRPGFGIAFPGNEIPGWFNHRKL 915



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 27/141 (19%)

Query: 3    DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
            D FLSFRG DT ++F  HL+  L+L+ I    D +L +   I   L   IE S ++IIIF
Sbjct: 986  DFFLSFRGADTSNDFI-HLNTALALRVIIP-DDKELEKVMAIRSRLFEAIEESGLSIIIF 1043

Query: 63   SERYASSRWFF----------------------YRVDPSHVRKQSHSFGRHFSRLRKRF- 99
            +   AS  W F                      Y V  S +  Q+ S+   F +  + F 
Sbjct: 1044 ARDCASLPWCFDELVKIVGFMDEMRSDTVFPVSYDVKQSKIDDQTESYTIVFDKDEEDFR 1103

Query: 100  --PEKMKRWKNALTEAADLSG 118
               EK++RW N LTE    SG
Sbjct: 1104 ENEEKVQRWTNILTEVLFSSG 1124


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 275/912 (30%), Positives = 426/912 (46%), Gaps = 185/912 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRG DTR++FTS+L   L  K I TF D +L RG +IS  +   IE S ++I++
Sbjct: 17  FDVFVSFRGADTRNSFTSYLVQFLQRKGIDTFFDGKLRRGKDIS-VVFDRIEQSKMSIVV 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA+S W                      FY+V  S V  Q  +FG  F   ++ F 
Sbjct: 76  FSENYANSTWCLEELWKIIQCREKFGHGVLPVFYKVRKSDVENQKGTFGVPFLSPKESFK 135

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              +K+  WK AL  A+++ G+     RPES+ +E+IA +  + L+     +  G  G+E
Sbjct: 136 GDGQKVGAWKEALKIASNILGYVLPEERPESEFVEKIAKETFRMLNDLSPCELSGFPGIE 195

Query: 158 CSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              +E+E LL   ++   + + + G+ GI K T+A +V+ +  R F+G  F  ++    +
Sbjct: 196 SRSKELEELLMFDNKNCIRTIGVLGMTGIGKTTVADSVYKRNYRQFDGYCFLEDIENESK 255

Query: 217 TGGIKDLQKKLLSELSKDGN--MRNIESQLNRLARKKVRIVFDDVTS------------- 261
             G+  L +KLL +L  + N  +R      + L  KK+ IV D+VT              
Sbjct: 256 RHGLHHLHQKLLCKLLDEENVDIRAHGRLKDFLRNKKLFIVLDNVTEENQIEVLIGEQEM 315

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH--IELT 316
              GSR++ITTRDK++L+N  A+  Y +  L   +A +LFC  AF  D L  +   ++L+
Sbjct: 316 YRKGSRIVITTRDKKLLQNN-ADAIYVVPRLNDREAMELFCLDAFS-DKLYPTEEFLDLS 373

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +  + YA+G PLALK+LG  L  + +  W     +L ++P  EI++VLK+SY++LDD QK
Sbjct: 374 NNFVYYAKGHPLALKLLGSGLRQKERTYWVEKWERLMVMPDKEIQKVLKMSYEALDDEQK 433

Query: 377 NVFLDIACFLEGEHRDEVISIFDASKSLINLD-------LFYRIRMHDLLRDMGREIVRK 429
           ++FLDIACF   E  D V SI  +   +  L+        + R+ MHDL+  MG+EI  +
Sbjct: 434 SIFLDIACFFRSEKADLVSSILKSDHVMRELEDKCLVTKSYNRLEMHDLMHAMGKEIGYE 493

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
            SI   GKR+RLW+HKDI  VL++ TGTE + GI  +M+ V R I ++   F +M  L+F
Sbjct: 494 SSIKRAGKRSRLWNHKDIRNVLEQKTGTECVRGIFFNMSNVER-IKLSPDVFMRMSNLKF 552

Query: 490 LRFYGDKNKCMVSHLEGVPFA--------EVRHLEWPQCPLKTL--NICAEKLVSLKMPC 539
           L+F+         +   + F+        E+ +L W   P + L      E+LV L +  
Sbjct: 553 LKFHNSHCSQWCDNDHKIQFSKELDHFPDELVYLHWQGYPYEYLPSEFNPEELVDLSLRY 612

Query: 540 TKVEQLWDD-----------------------------VQRLPSSLCT-----------F 559
           + ++QLW+D                             ++RL    CT            
Sbjct: 613 SYIKQLWEDDKKTENLRWVDLSQSKDLRSLSGLSKAKNLERLDLEGCTSLVLLGSSIEKM 672

Query: 560 KTPITFEIIDCKMLERLPDEL-----------------------ENLEYLTVKGTTIREL 596
              I   + DC  LE LP+ +                       +N+E L ++G+ I ++
Sbjct: 673 NKLIYLNLRDCTSLESLPEGINLKSLKTLILSGCSNLQEFQIISDNIESLYLEGSAIEQV 732

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP----ELPC--- 649
            E +  L  +  L L N   L+ +P  +  L  L  L +S C  L++LP    E+ C   
Sbjct: 733 VEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSGCSALESLPPIKEEMECLEI 792

Query: 650 ------------------NLGLLS----------------ARNCTSLEKL--PAGLSSMS 673
                             NL + S                A  C SLEK+  P  L  ++
Sbjct: 793 LLMDGTSIKQTPETICLSNLKMFSFCGSSIEDSTGLHYVDAHGCVSLEKVAEPVTLPLVT 852

Query: 674 SVLYVN--LCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-----------SMYFPGNE 720
             ++      N  KL+  E   IV    +K  L     ++            ++ FPG+E
Sbjct: 853 DRMHTTFIFTNCFKLNRAEQEAIVAQAQLKSQLLARTSLQHNNKGLVLEPLVAVCFPGSE 912

Query: 721 IPKWFRHQSMGS 732
           IP WF HQ MGS
Sbjct: 913 IPSWFSHQRMGS 924


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 264/789 (33%), Positives = 406/789 (51%), Gaps = 106/789 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEAS--CIA 58
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  L   IE S  C+ 
Sbjct: 20  YDVFLSFRGSDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLFRAIEESRWCLN 79

Query: 59  IIIF-----SERYASSRWFFYRVDPSHVRKQSHSFGRHFS-RLRKRFPEKM---KRWKNA 109
            ++      S++ +     FY VDPS VR Q  SFG   +   R    EKM   ++W+ A
Sbjct: 80  ELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDANQEKMEMIQKWRIA 139

Query: 110 LTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCI 169
           L EAA+LSG   N  + E+++++EI + +++RL+    S  + +VG+   +E+++SL+  
Sbjct: 140 LREAANLSGCHVND-QYETQVVKEIVDTIIRRLNHHPLSVGRNIVGIGVHLEKLKSLMNT 198

Query: 170 GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLS 229
               V  + I+GIGG+ K TIA A++N+ S  ++G  F  N+RE  + G I  LQ++LL 
Sbjct: 199 KLNMVSVVGIYGIGGVGKTTIAKAIYNETSDQYDGRSFLRNIRERSK-GDILQLQQELLH 257

Query: 230 ELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT----------------SGSRVII 267
            + +  N +  N++  ++ + R     +V ++FDDV                 + S +II
Sbjct: 258 GILRGKNFKINNVDEGISMIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIII 317

Query: 268 TTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVP 327
           TTRDK VL    A+  Y + +L   +A +LF  WAF  +     +  L+   I YA G+P
Sbjct: 318 TTRDKHVLAQYGADIPYEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLP 377

Query: 328 LALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE 387
           LALKV+G  L G+    WESA+ KL+IIPH EI  VL+IS+D LDD  K +FLD+ACF +
Sbjct: 378 LALKVIGASLFGKKISHWESALCKLKIIPHKEIHNVLRISFDGLDDIDKGMFLDVACFFK 437

Query: 388 GEHRDEVISIFDASKSLINLDLFYR---------IRMHDLLRDMGREIVRKESINHPGKR 438
           G+ +D V  I       +   L  R         + MHDL++ MG E++R+E    PG+R
Sbjct: 438 GDDKDFVSRILGPHAEHVITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRR 497

Query: 439 NRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNK 498
           +RLW   + Y VL  NTGT AIEG+ LD  K N    + + +F +M +LR L+ +  + K
Sbjct: 498 SRLW-DSNAYHVLIGNTGTRAIEGLFLDRCKFNLS-QLTTKSFKEMNRLRLLKIHNPRRK 555

Query: 499 CMV-SHL-EGVPFA--EVRHLEWPQCPLKT--LNICAEKLVSLKMPCTKVEQLWD----- 547
             +  HL     F+  E+ +L W + PL++  LN  A+ LV L +  + ++QLW      
Sbjct: 556 LFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGNKLH 615

Query: 548 ----------------------------------------DVQRLPSSLCTFKTPITFEI 567
                                                   +++RLP  +  +K   T   
Sbjct: 616 DKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCTMHGCVNLERLPRGIYKWKHLQTLSC 675

Query: 568 IDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
             C  LER P+    +  L  L + GT I +LP S+  L+ ++ L+L   + L +IP  I
Sbjct: 676 NGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHI 735

Query: 625 RHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCTS--LEKLPAGLSSMSSVLYVNL- 680
            HLS L  L + HC  ++  +P   C+L  L   N        +P  ++ +S +  +NL 
Sbjct: 736 CHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLS 795

Query: 681 -CNFLKLDP 688
            C+ L+  P
Sbjct: 796 HCSNLEQIP 804



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 61/270 (22%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPS +C FK+  T     C  LE  PD   ++E+L  L + GT I+E+P S+ RL 
Sbjct: 1115 NLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLR 1174

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP------------------- 645
             ++   L+N  NL  +P+SI +L+ L  L +  C   + LP                   
Sbjct: 1175 GLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDS 1234

Query: 646  ---ELPCNLGLLSAR-----------------NCTSLEKL----------PAGLSSMSSV 675
               +LP   GL S R                 + +SLE+L          P G+S + ++
Sbjct: 1235 MNFQLPSLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNL 1294

Query: 676  LYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIK----KSMYFPGNEIPKWFRHQS 729
             +++L  C  L+  P EL   V+   ++  ++ + G K     +     N IP+W  HQ 
Sbjct: 1295 TFLDLSHCKMLQHIP-ELPSGVRRHKIQRVIFVQ-GCKYRNVTTFIAESNGIPEWISHQK 1352

Query: 730  MGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             G   T+K  P      +  +    C+++V
Sbjct: 1353 SGFKITMKL-PWSWYENDDFLGVVLCSLIV 1381


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 266/748 (35%), Positives = 399/748 (53%), Gaps = 90/748 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGYLYHELQRRGIRTFRDDPQLERGTAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY V+PSHVR Q  SF   F   +++F 
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVNPSHVRHQRGSFAEAFQEHQEKFG 138

Query: 101 E---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           +   +++ W++ALT+ A L+G+ S   R E++LI EI   +  +L  +      ++ L G
Sbjct: 139 KGNNEVEGWRDALTKVASLAGWTSEKYRYETELIREIVQALWSKLHPSLSVFGSSEKLFG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EEI+ LL   +  V  + IWG+GGI K T+A  V+ KIS  FE   F  NVRE  
Sbjct: 199 MDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYQKISHQFEVCIFLDNVREVS 258

Query: 216 ETG-GIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
           +T  G+ DLQKK+LS++ K+ N++  ++ S +  + R    K V +V DDV         
Sbjct: 259 KTTHGLVDLQKKILSQIFKEENVQVLDVYSGITMIKRCVCNKAVLLVLDDVDQSEQLENL 318

Query: 263 ----------SRVIITTRDKQVLKNCWANKK-YRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     SR+IITTRD+ VL     ++K Y +K L   +A +LFC  AF     +  
Sbjct: 319 VGGKDCFGLRSRIIITTRDRHVLVTHGVDQKPYELKGLNEDEALQLFCWKAFRNCKPEEY 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + E     + YA G+PLALK+LG +L GR+   W SA+ KL+  P+  + E+LKIS+D L
Sbjct: 379 YAEPCKSFVTYAAGLPLALKILGSFLNGRTPGEWNSALAKLQQTPYRTVFEILKISFDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
           D+++K +FLDIACF      + +I + D+S             KSL+ +    ++ +HDL
Sbjct: 439 DETEKKIFLDIACFRRLYRNEFMIELVDSSDPCNCITRSVLAEKSLLTISSDNQVDVHDL 498

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + +MG EIVR+E+   PG R+RL    DI+ V  KNTGTEAIEGI L ++K+  E   N 
Sbjct: 499 IHEMGCEIVRQEN-EEPGGRSRLCLRDDIFHVFTKNTGTEAIEGILLHLDKL-EEADWNL 556

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLK 536
             FSKM KL+ L  +   N  +    + +P A +R L W   P K+L  C   ++L  L 
Sbjct: 557 ETFSKMCKLKLLYIH---NLRLSVGPKFLPNA-LRFLSWSWYPSKSLPPCFQPDELTELS 612

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM---LERLPD--ELENLEYLTVKG- 590
           +  + ++ LW+ ++ L          +  + ID      L R PD   + NLE L ++G 
Sbjct: 613 LVHSNIDHLWNGIKYL----------VNLKSIDLSYSINLRRTPDFTGIPNLEKLVLEGC 662

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           T + ++  S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE    
Sbjct: 663 TNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKKIPEFEGQ 721

Query: 651 LGLLS--ARNCTSLEKLPAGLSSMSSVL 676
              LS  +   T++EKLP+ +  +S  L
Sbjct: 722 TNRLSNLSLGGTAVEKLPSSIEHLSESL 749



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 20/184 (10%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           E+P  +G LS ++RL L  N N   +P SI  LSKLT   + +C+RLQ LPEL     L 
Sbjct: 815 EIPNDIGSLSSLRRLELGGN-NFVSLPASIYLLSKLTNFNVDNCKRLQQLPELSAKDVLP 873

Query: 655 SARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPNE-------------LSEIVKDGW 699
            + NCT L+    P  L  +++  ++N  N L +  N+             +  + +   
Sbjct: 874 RSDNCTYLQLFPDPPDLCRITTNFWLNCVNCLSMVGNQDASYFLYSVLKRWIEVLSRCDM 933

Query: 700 MKHSLYEERGIKKS--MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           M H     R   KS  +  PG+EIP+WF +QS+G   T K   P     +K I FA CA+
Sbjct: 934 MVHMQETHRRPLKSLELVIPGSEIPEWFNNQSVGDRVTEKL--PSDECNSKCIGFAVCAL 991

Query: 758 VVFP 761
           +V P
Sbjct: 992 IVPP 995


>gi|357439719|ref|XP_003590137.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355479185|gb|AES60388.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 859

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 247/738 (33%), Positives = 375/738 (50%), Gaps = 91/738 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG+D    F SHLH  L    I  F  D++ +GD+IS SLL  I  S I+I+
Sbjct: 6   VYDVFLSFRGDDGSAKFVSHLHSSLQNAGISVFRGDEIQQGDDISISLLRAIRHSRISIV 65

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL--RK 97
           + S  YA+SRW                       Y VDPS VR Q   FG+    L    
Sbjct: 66  VLSINYANSRWCMFELEKIMEIGRTGGLVVVPVLYEVDPSEVRHQEGQFGKALEDLILEI 125

Query: 98  RFPEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              E  K  W+  L +     GF     R ES  I+ I   V + LD T     +  VGV
Sbjct: 126 SVDESTKSNWRRDLIDIGGKDGFIVTDSRNESADIKNIVEHVTRLLDKTDLFVVEYPVGV 185

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              +E++ +LL I  S  V  L IWG+GG+ K T+A A++N+I   FEG  F LN+RE  
Sbjct: 186 RSRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVW 245

Query: 216 ETGGIK-DLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
           ET   +  LQ+ LL E               RLA+K+V +V DDV               
Sbjct: 246 ETDTNQVSLQENLLKE---------------RLAQKRVLLVLDDVNKLDQLKALCGSRKW 290

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSRVIITTRD ++L++C  +  Y + E+   ++ +LFC  AF            +  
Sbjct: 291 FGPGSRVIITTRDMRLLRSCRVDLVYTVVEMDERESLELFCWHAFKQPCPPEGFATHSRD 350

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD-SQKN 377
            I Y+ G+PLAL+VLG YL G     W+  + KL+ IPH ++++ LK+S+D L D ++K 
Sbjct: 351 VIVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKKLKVSFDGLKDVTEKQ 410

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +F DIACF  G  ++++I I +               +SL+ +D+  ++RMHDLLRDMGR
Sbjct: 411 IFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLLRDMGR 470

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           +IV +ES  HP  R+RLW  ++++ +L  + GTEA++G++L+     RE+ + + +F KM
Sbjct: 471 QIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALEF---PREVCLETKSFKKM 527

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE----KLVSLKMPCT 540
            KLR LR  G K K    +L G    +++ L W   P     + AE     LV +++  +
Sbjct: 528 NKLRLLRLAGVKLKGDFKYLSG----DLKWLYWHGFP--ETYVPAEFQLGSLVVMELKYS 581

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIRELPES 599
           K++Q+W+  Q L  +L       + ++ +      +P    NLE L ++   ++  +  S
Sbjct: 582 KLKQIWNKSQML-ENLKVLNLSHSLDLTETPDFSYMP----NLEKLILEDCPSLSTVSHS 636

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS-ARN 658
           +G L  +  + L++ + L  +P+SI  L  L  L +S C  L  L +L     L +   +
Sbjct: 637 IGSLHKILLINLTDCTGLRTLPKSIYKLKSLATLILSGCSMLDKLEDLEQMESLTTLIAD 696

Query: 659 CTSLEKLPAGLSSMSSVL 676
            T++ ++P+ L  M  V 
Sbjct: 697 KTAIPEVPSSLPKMYDVF 714



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRGED R  F SHLH  L    I  F DD  I RGD IS SL   IE S I+I
Sbjct: 710 MYDVFLSFRGEDNRPRFISHLHSSLHSAGIYAFKDDDGIQRGDQISVSLGKAIEQSRISI 769

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ S  YA+SRW                      FY VDPS VR Q   FG+ F  L   
Sbjct: 770 VVLSTNYANSRWCMLELEKIMEVGRMNGRVVVPVFYDVDPSEVRHQKGRFGKAFEELLST 829

Query: 99  FP---EKMKRWKNALTEAADLSGF 119
                     W+  L +   ++GF
Sbjct: 830 ISVDESTYSNWRRQLFDIGGIAGF 853


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 257/750 (34%), Positives = 380/750 (50%), Gaps = 123/750 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFRGEDTR+NFT HL   L    IKTF DDQL RG+ I   LL TIE S I+I++
Sbjct: 20  FEVFLSFRGEDTRNNFTDHLFVNLHGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKRF 99
           FS+ YA S+W                      FY +DP  VRKQ+ SFG  FS   R   
Sbjct: 80  FSKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHLDPCDVRKQTGSFGEAFSIHERNVD 139

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            +K++RW+++LTEA++LSGF  N         +   ND+              +VG    
Sbjct: 140 AKKVQRWRDSLTEASNLSGFHVN---------DGDLNDI-------------RMVG---- 173

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
                              I+G GGI K TIA  V+N+I   F G+ F  +VRE    G 
Sbjct: 174 -------------------IYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKGY 214

Query: 220 IKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVT-------------- 260
              LQ++LL + +  D    NI   +N    RL  KKV IV DDV               
Sbjct: 215 QLQLQQQLLHDTVGNDVEFSNINKGVNIIKSRLRSKKVLIVIDDVDRLQQLESVAGSPKW 274

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GS +IITTRD+ +L        ++   L Y +A +LF Q AF  +     +++L++ 
Sbjct: 275 FGPGSTIIITTRDQHLLVEYGVTISHKATXLHYEEALQLFSQHAFKQNVPXEDYVDLSNC 334

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            ++YAQG+PLALKV G  L G + + W+SA  KL+  P  EI +VL+IS+D LD SQK V
Sbjct: 335 MVQYAQGLPLALKVXGSSLQGMTXDEWKSASDKLKKNPMKEINDVLRISFDGLDPSQKEV 394

Query: 379 FLDIACFLEGEHRDEVISIFDASK--SLINLDLFY----------RIRMHDLLRDMGREI 426
           FLDIACF +GE +D V  I D     +  N+ + +           I+MHDL+ +MG  I
Sbjct: 395 FLDIACFFKGECKDFVSRILDGCNLFATCNIRVLHDRCLVTISDNMIQMHDLIHEMGWAI 454

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR+E    P K +RLW   DIY    +    + I+ ISLD+++ +REI  N+  FSKM K
Sbjct: 455 VREECPGDPCKWSRLWDVDDIYDAFSRQEEMQNIQTISLDLSR-SREIQFNTKVFSKMKK 513

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFA-------EVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           LR L+ Y + +  +      V          ++R+L W +C L +L  N   + L+ + +
Sbjct: 514 LRLLKIYCNDHDGLTREKYKVLLPKDFQFPHDLRYLHWQRCTLTSLPWNFYGKHLIEINL 573

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG-TTIR 594
             + ++QLW   + L       +     ++ + K L ++P    + NLE L ++G T++ 
Sbjct: 574 KSSNIKQLWKGNKCL-------EELKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTSLC 626

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           EL  S+G L  +  L L+    L   P S++    L  L+++ C  L+  PE+  N+  L
Sbjct: 627 ELHSSIGDLKSLTYLNLAGCEQLRSFPSSMK-FESLEVLYLNCCPNLKKFPEIHGNMECL 685

Query: 655 SA--RNCTSLEKLPAGLSSMSSVLYVNLCN 682
                N + +++LP+ +  ++S+  +NL N
Sbjct: 686 KELYLNESGIQELPSSIVYLASLEVLNLSN 715



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLE---RLPDELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  K+     +  C  LE    + +++E LE L ++ T I ELP S+  L 
Sbjct: 977  NLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLR 1036

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
             +K L L N  NL  +P SI +L+ LT L + +C +L  LP+    L C L +L    C 
Sbjct: 1037 GLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCN 1096

Query: 661  SL-EKLPAGLSSMSSVLYVNLC-NFLKLDPNELSEIVK 696
             + E++P+ L  +S ++++N+  N ++  P  ++++ K
Sbjct: 1097 LMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCK 1134



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 20/176 (11%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++     +  C   E+ P+    ++ L+ L+++ T I+ELP S+GRL  
Sbjct: 860  IKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRLQA 919

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
            ++ L LS  SNLER PE  +++  L  LF+        +  LP ++G L+        NC
Sbjct: 920  LESLTLSGCSNLERFPEIQKNMGNLWALFLDE----TAIEGLPYSVGHLTRLDHLNLDNC 975

Query: 660  TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKDGWMKHSLY-EERGIKK 712
             +L+ LP  +  + S+  L +N C+ L+      SEI +D      L+  E GI +
Sbjct: 976  KNLKSLPNSICELKSLEGLSLNGCSNLE----AFSEITEDMEQLERLFLRETGISE 1027



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTI--RELPESL 600
            +++  LP+S+       +  + +C  L  LPD L +L+     L + G  +   E+P  L
Sbjct: 1047 ENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDL 1106

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
              LS +  L +S N  +  IP  I  L KL  L I+HC  L+ + ELP +LG + A  C 
Sbjct: 1107 WCLSLLVFLNISEN-RMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWIEAHGCP 1165

Query: 661  SLE 663
            SLE
Sbjct: 1166 SLE 1168



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 30/176 (17%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSW 605
           +Q LP+S+ +  +     +  C   E+  D   N   L  L +  + I+ELP S+G L  
Sbjct: 813 IQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKELPGSIGYLES 872

Query: 606 VKRLILSNNSNLERIPE-----------------------SIRHLSKLTFLFISHCERLQ 642
           ++ L LS  SN E+ PE                       SI  L  L  L +S C  L+
Sbjct: 873 LENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRLQALESLTLSGCSNLE 932

Query: 643 TLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
             PE+  N+G L A   + T++E LP  +  ++ + ++NL  C  LK  PN + E+
Sbjct: 933 RFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPNSICEL 988



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 36/300 (12%)

Query: 446 DIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKC------ 499
           +I Q+ K N   E ++GI L     N +  +    FS MP L  L   G  + C      
Sbjct: 577 NIKQLWKGNKCLEELKGIDLS----NSKQLVKMPKFSSMPNLERLNLEGCTSLCELHSSI 632

Query: 500 ----MVSHLEGVPFAEVRH----LEWPQCPLKTLNICAE----KLVSLKMPCTKVEQLWD 547
                +++L      ++R     +++    +  LN C        +   M C K   L +
Sbjct: 633 GDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNE 692

Query: 548 D-VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTT-IRELPESLGR 602
             +Q LPSS+    +     + +C   E+ P    N+++L    ++G       P++   
Sbjct: 693 SGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFENFPDTFTY 752

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCT 660
           +  ++RL L   S ++ +P SI +L  L  L IS C + +  PE+  N+  L       T
Sbjct: 753 MGHLRRLHL-RKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRXT 811

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD-GWMKHSLYEERGIKKSMYFPGN 719
           ++++LP  + S++S+  ++L   LK +  + S++  + G ++       GIK+    PG+
Sbjct: 812 AIQELPNSIGSLTSLEILSLEKCLKFE--KFSDVFTNMGRLRELCLHRSGIKE---LPGS 866


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 265/761 (34%), Positives = 399/761 (52%), Gaps = 92/761 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFTSHL+  L   +I+TFIDD+ L RG+ I+  LL  IE S IA+I
Sbjct: 21  YDVFLSFRGKDTRNNFTSHLYKALDHANIETFIDDEGLPRGEEIAPELLKAIEGSRIALI 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR- 98
           +FS+ YA S+W                      FY V+PS VR Q+  +G  F+   +  
Sbjct: 81  VFSKTYADSKWCLDELVKIMECEKEKGQQVFPIFYHVEPSEVRNQTGIYGEAFNNHERNA 140

Query: 99  ----FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 +K+++W+ AL +A +LSGF     R E++ IE+I  ++ +RL        K +V
Sbjct: 141 DEEKKKKKIEQWRTALRKAGNLSGFPLQD-RSEAEFIEDIIGEI-RRLIPKLVDVGKNMV 198

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++ ++++++SL+   S  V  + I+GIGGI K TIA  V+N +   F+   F  NVRE 
Sbjct: 199 GMDGNLKQVKSLIDAQSNEVSMVGIYGIGGIGKTTIAKVVYNDMLYKFKRHSFLENVREK 258

Query: 215 EETG-GIKDLQKKLLSE--LSKDGNMRNIESQLNRLARK----KVRIVFDDVTS------ 261
            + G G+ +LQ+KLL +  + K+  +RNI+  + ++  +    KV IV DDV        
Sbjct: 259 SKGGRGLLELQEKLLCDILMEKNLELRNIDKGIEKIKSECCFEKVLIVLDDVDCPRQLEF 318

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS +I+TTR+K+ L    +   Y  K L    A +LFC  AF   H   +
Sbjct: 319 LAPNSDCFHRGSIIIVTTRNKRCLNVYESYSSYEAKGLAREQAKELFCWNAFRKHHPKDN 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +++L+++ + YA+G+PLAL VLG +L  R  + WES + KL+  P  +I++VL+ISYD L
Sbjct: 379 YVDLSNRILDYAKGLPLALVVLGSFLFQRDVDEWESTLDKLKTNPLEDIQKVLQISYDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDASK-----SLINLD-------LFYRIRMHDLL 419
           DD  K +FLDIACF + +    V  I +  K      L  LD        +  IRMHDLL
Sbjct: 439 DDKCKKLFLDIACFFKYKDEKFVTRILEGCKFHPKIGLRVLDERCLISITYGTIRMHDLL 498

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN-KVNREIHMNS 478
           ++MG  IVR+     PGK +RLW  +DI  V  +N GT+ IEGI ++ +    + I + +
Sbjct: 499 QEMGWAIVRQIDPECPGKWSRLWELQDIESVFTRNKGTKNIEGIFINRSWDTKKRIQLTA 558

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF KM +LR L   G  N   +S    +P  ++ +  W   PL+ L  N   E LV L 
Sbjct: 559 EAFRKMNRLRLLIVKG--NMVQLSQDFELPCHDLVYFHWDNYPLEYLPSNFHVENLVELN 616

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           +  + +E LW+        L       +  ++    +   P    NLE L +KG T    
Sbjct: 617 LWYSNIEHLWEG-NMTARKLKVINLSYSMHLVGISSISSAP----NLEILILKGCT---- 667

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
                 L+ +++L L    NL  +P+SI  LS L  L +  C +L   P +  N+G L A
Sbjct: 668 ----SNLNGLEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGI--NIGSLKA 721

Query: 657 RN------CTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
                   C ++E LP  + S SS+  ++L  C+ LK  P+
Sbjct: 722 LEYLDLSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPD 762



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 563  ITFEIIDCKMLER-LPDELENL---EYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSN 616
            +   +  CK  E  +P ++ NL   + L++    + E  +   +  L+ ++ L L  N +
Sbjct: 979  VKLSLTKCKPTEEGIPSDIRNLSPLQQLSLHDCNLMEGKILNHICHLTSLEELHLGWN-H 1037

Query: 617  LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
               IP  I  LS L  L +SHC+ LQ +PELP +L  L A     +   P+ L   S V 
Sbjct: 1038 FSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLDAHCSDRISSSPSLLPIHSMV- 1096

Query: 677  YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP-GNEIPKWFRHQSMGSSAT 735
                        N     ++D  + H      G    +  P  + I +W  +++MG    
Sbjct: 1097 ------------NCFKSEIEDCVVIHRYSSFWGNGIGIVIPRSSGILEWITYRNMGGHKV 1144

Query: 736  LKTRPPRPAGYNKLISFAFCAVVVFPA 762
                PP     + L  FA C V V PA
Sbjct: 1145 TIELPPNWYENDDLWGFALCCVYVAPA 1171



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 16/160 (10%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENLEYLTVKGTT-IRELPE-SL 600
           ++++ LP+++ +F +  T  ++ C  L+  PD       +L  L++ G + ++  P+ ++
Sbjct: 731 ENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFPDINI 790

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---- 656
           G L  ++ L  S   NLE +P +I  LS L  L +  C +L+  P++  N G L A    
Sbjct: 791 GSLKALQLLDFSRCRNLESLPNNIGSLSSLHTLLLVGCSKLKGFPDI--NFGSLKALQLL 848

Query: 657 --RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
               C +LE LP  + ++SS+  + + N  KL+  E+ EI
Sbjct: 849 DFSRCRNLESLPMSIYNLSSLKTLRITNCPKLE--EMLEI 886


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 257/788 (32%), Positives = 397/788 (50%), Gaps = 104/788 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SFRGED R  F SH+      K I  FID+++ RG++I   L+  I  S IAI++
Sbjct: 70  HDVFPSFRGEDVRIGFLSHIQKEFKRKGITPFIDNEIRRGESIGPELIRAIRGSKIAIVL 129

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS+W                      FY+VDPSHV+K    FG+ F +    + 
Sbjct: 130 LSRNYASSKWCLDELVEVMKCKEELGQTVIPVFYKVDPSHVKKLRGYFGKVFEKTCEGKS 189

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E  ++W++AL + A ++G+DS+    E+ +IE+IA DV  +L ++  S +   LVG+  
Sbjct: 190 KEDTEKWRHALEKVATIAGYDSSTWDNEAAMIEQIATDVSNKLISSVPSSDFNSLVGMRA 249

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL + S+ V  + IWG  GI K TIA ++F++ S  F+ S F  N++      
Sbjct: 250 HMKSMELLLRLDSDEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSVFMENIKREYPRP 309

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
             +       LQ K LS +    D  + ++    +RL  KKV +V DDV           
Sbjct: 310 CFDRYSAQVQLQNKFLSLILNQNDVAIHHLGVAQDRLKNKKVLVVLDDVDHSAQLDALAK 369

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSR+I+TT+DK++L     N  Y +      +A ++FC  AFG         +
Sbjct: 370 ETCWFGSGSRIIVTTQDKKILNAHRINHIYEVGFPHDDEALEIFCINAFGQKSPYDGFGD 429

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +  +    +PL L V+G Y  G SKEVWE  + +L      E E +LK SYD+L D 
Sbjct: 430 LAREVTRLVGNLPLGLSVMGSYFKGLSKEVWERELPRLRTRLDGETESILKFSYDALCDE 489

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
            + +FL IACF  GE  D+V                  A KSLI++     IRMHDLL  
Sbjct: 490 DQALFLHIACFFNGERTDKVEEFLAEKFVAVEGRLRVLAEKSLISVGSEGYIRMHDLLAR 549

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSYA 480
           +GREIVRK+S N PG+R  L    DI QVL+ +T G+ ++ GI+  + K   ++ ++  A
Sbjct: 550 LGREIVRKQSPNEPGQRQFLVDDGDIRQVLRDDTLGSRSVIGINFLLKK---KLKISDQA 606

Query: 481 FSKMPKLRFLR----------FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           F +M  L+FLR          F G  ++ ++  +  +P  EVR L+W   P+  L  +  
Sbjct: 607 FERMSNLQFLRLDSQYFAQILFEGKSSQYILESVNCLP-REVRLLDWRTFPMTCLPSDFN 665

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
            E L+ +KM C+ +E+LW+  +       T +     ++   K L+ LP+     NL  L
Sbjct: 666 PELLMEIKMICSNLEKLWEGNK-------TIRNLKWMDLSHSKNLKELPNLSTATNLREL 718

Query: 587 TVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            + G +++ ELP S+G L+ +K+L L   S+L  +P SI +++ L  L +S C  L  LP
Sbjct: 719 NLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSLVELP 778

Query: 646 ELPCNLGLLSARN---CTSLEKLPAGLSSMSS--------------VLYVNLCNFLKLDP 688
               N+  L   N   C+S+ +L   + +M++              + + N+ N   LDP
Sbjct: 779 SSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNECSSLVELTFGNMTNLKNLDP 838

Query: 689 NELSEIVK 696
           N  S +V+
Sbjct: 839 NRCSSLVE 846



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 33/190 (17%)

Query: 570  CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL------------ 617
            C +L+  P+   N+ +L +KGT I E+P S+   S +  L +S + NL            
Sbjct: 936  CSVLKSFPEISTNIIFLGIKGTAIEEIPTSIRSWSRLDTLDMSYSENLRKSHHAFDLITN 995

Query: 618  --------ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGL 669
                    + I   ++ +S+L  L I+ C +L +LP+LP +L  +   NC SLE+L +  
Sbjct: 996  LHLSDTGIQEISPWVKEMSRLRELVINGCTKLVSLPQLPDSLEFMHVENCESLERLDSLD 1055

Query: 670  SSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
             S       +L   N LKL+   +  I+K              K    FPG  +P +F +
Sbjct: 1056 CSFYRTKLTDLRFVNCLKLNREAVDLILKT-----------STKIWAIFPGESVPAYFSY 1104

Query: 728  QSMGSSATLK 737
            ++ GSS ++K
Sbjct: 1105 RATGSSVSMK 1114



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLP-DELENLEYLTV-KGTTIRELPESLGRLSWV 606
           V RL  S+         E+ +C  L  L    + NL+ L   + +++ E+  S+G ++ +
Sbjct: 798 VVRLSFSIGNMTNLKELELNECSSLVELTFGNMTNLKNLDPNRCSSLVEISSSIGNMTNL 857

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSLE 663
            RL L+  S+L  +P SI +++ L  L +S C  L  LP       NL  L+ RNC++L 
Sbjct: 858 VRLDLTGCSSLVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLM 917

Query: 664 KLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEE 707
            LP  + +M S+ +++L  C+ LK  P   + I+  G +K +  EE
Sbjct: 918 ALPVNI-NMKSLDFLDLSYCSVLKSFPEISTNIIFLG-IKGTAIEE 961



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 25/118 (21%)

Query: 580 LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL----------- 627
           + NL  L + G +++ ELP S+G ++ ++ L LS  S+L  +P SI +L           
Sbjct: 854 MTNLVRLDLTGCSSLVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNC 913

Query: 628 ------------SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
                         L FL +S+C  L++ PE+  N+  L  +  T++E++P  + S S
Sbjct: 914 STLMALPVNINMKSLDFLDLSYCSVLKSFPEISTNIIFLGIKG-TAIEEIPTSIRSWS 970


>gi|356542387|ref|XP_003539648.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1069

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 254/780 (32%), Positives = 403/780 (51%), Gaps = 96/780 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           MYDVF++FRGEDTR NF  HLH VLS   + TF+DD+ L++G  + Q L+  IE S I++
Sbjct: 18  MYDVFINFRGEDTRRNFVCHLHSVLSNAGVNTFLDDENLVKGMELIQ-LMRAIEGSQISL 76

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRK 97
           ++FS+ Y  S W                      FY V PS VR+Q   FG+   +   K
Sbjct: 77  VVFSKNYTQSTWCLTELENIIKCHRLHGHVVVPIFYHVSPSDVRRQEGDFGKALNASAEK 136

Query: 98  RFPEK---MKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKG 152
            + E    + RW +ALT AA+  G+D  V++P  E+KL++EI +DVLK+L+    S  + 
Sbjct: 137 IYSEDKYVLSRWGSALTTAANFCGWD--VMKPGNEAKLVKEIVDDVLKKLNGEVLSIPEF 194

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            VG+E   +E+   +   S  VC + IWG+GG  K TIA  ++N+I   F G  F  N+R
Sbjct: 195 PVGLEPRGQEVIGFIKNQSTKVCMIGIWGMGGSGKTTIAKFIYNQIHSRFPGKSFIENIR 254

Query: 213 EAEETGGI--KDLQKKLLSELSKDG--------NMRNIESQLNRLARKKVRIVFDDVTS- 261
           +  ET G     LQ++LL+++ K              IE    RL+ K+V IV DDV   
Sbjct: 255 KVCETDGRGHAHLQEQLLTDVLKTKVKIHSVGMGTSMIE---KRLSGKEVLIVLDDVNEF 311

Query: 262 ---------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                          GS +IITTRD+ +L     +  Y+M+E+   +A +LF   AF   
Sbjct: 312 DQLKDLCGNRKWIGLGSVIIITTRDRGLLNILNVDYVYKMEEMNENEALELFSWHAFRKA 371

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
                  EL    + Y  G+PLAL+VLG YL  R+++ W++ + KLEIIP+ ++++ L+I
Sbjct: 372 EPREEFNELARNVVAYCGGLPLALEVLGSYLIERTEKEWKNLLSKLEIIPNNQVQKKLRI 431

Query: 367 SYDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYR 412
           S+D L D  +K++FLD+ CF  G+ +  V  I +               +SLI ++   +
Sbjct: 432 SFDGLHDQMEKDIFLDVCCFFIGKDKAYVTEILNGCGLHADIGITVLIERSLIIVEKNNK 491

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + MH L+RDMGREI+R+     PGKR+RLW HKD+  VL KNTGTEA+EG++L ++  +R
Sbjct: 492 LGMHQLVRDMGREIIRESLTKEPGKRSRLWFHKDVIDVLTKNTGTEAVEGLALKLHLTSR 551

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           +    + AF +M +LR L+     +   V+   G    ++R + W   PLK +      E
Sbjct: 552 DC-FKADAFEEMKRLRLLKL----DHAQVTGDYGNFSKQLRWINWQGFPLKYIPKTFYLE 606

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            ++++ +  + +   W + Q L              +   K L   PD  +L  LE L +
Sbjct: 607 GVIAIDLKHSNLRLFWKESQVLGQLK-------MLNLSHSKYLTETPDFSKLPKLENLIL 659

Query: 589 KGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K    + ++ +S+G L  +  +  ++ ++L  +P     L  +  L +S C ++  L E 
Sbjct: 660 KDCPRLCKVHKSIGDLHNLLLINWTDCTSLGNLPRRAYELKSVKTLILSGCLKIDKLEEN 719

Query: 648 PC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
                +L  L A N T+++K+P  +    S+ Y+++  F  L  +    I+   WM  ++
Sbjct: 720 IMQMESLTTLIAEN-TAVKKVPFSVVRSKSIGYISVGGFKGLAHDVFPSIILS-WMSPTM 777


>gi|359493220|ref|XP_002264441.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1481

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 289/930 (31%), Positives = 428/930 (46%), Gaps = 193/930 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT +L+  L    I+TF DD+ L +G  I+  LL  IE S I II
Sbjct: 20  YDVFLSFRGEDTRKNFTDYLYTTLVRHGIQTFRDDEELEKGGVIASDLLRAIEESRIFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA SRW                      FY VDPS +RKQS  FG  F+   +  
Sbjct: 80  IFSKNYADSRWCLNELVKITECARQKGSMVLPIFYHVDPSDIRKQSGIFGDAFTHHERDA 139

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            E+ K    +W+ ALTEAA+LSG   +  + E+++I EI + ++  L+    +  K +VG
Sbjct: 140 DEEKKETIQKWRTALTEAANLSGCHVDD-QYETEVISEIVDQIVGSLNRQPLNVGKNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++ ++      V  + I G GGI K TIA A++N+IS  ++GS F  NVRE  
Sbjct: 199 ISVHLEKLKLMMNTELNKVRVIGICGPGGIGKTTIAQAIYNEISYQYDGSSFLRNVRERS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTS-------- 261
           + G    LQ +LL  + K    +  NI+  +N + R    K+V ++FDDV          
Sbjct: 259 K-GDTLQLQNELLHGILKGKGFKISNIDEGVNMIKRCLNSKRVLVIFDDVDELTQLEYLA 317

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    S +IIT+RDKQVL     +  Y + +    +A +LF  WAF  +    ++ 
Sbjct: 318 DEKDWFKVKSTIIITSRDKQVLAQYGVDTPYEVHKFNEKEAIELFSLWAFKENLPKGAYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD
Sbjct: 378 NLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRDMG 423
             K +FLD+ACF +G+ +D V  I              K LI +     I MHDL++ MG
Sbjct: 438 MDKEIFLDVACFFKGKDKDFVSRILGPHAEYGIATLNDKCLITISK-NMIDMHDLIQQMG 496

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           REI+R+E     G+R+R+W   D Y VL +N GT AI+ + L++ K N        +F +
Sbjct: 497 REIIRQECPEDLGRRSRIW-DSDAYNVLTRNMGTRAIKALFLNICKFN-PTQFTEESFKQ 554

Query: 484 MPKLRFLRFYGDKNKCMVSHLEGVPFA-----------------EVRHLEWPQCPLKTL- 525
           M  LR L+ + D +   +S     P                   E+ +  W    L++L 
Sbjct: 555 MDGLRLLKIHKDDDYDRISIFRSYPHGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLP 614

Query: 526 -NICAEKLVSLKMPCTKVEQLW-------------------------------------- 546
            N  A+ L +L +  + ++QLW                                      
Sbjct: 615 TNFHAKDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILK 674

Query: 547 --DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPES-- 599
             ++++ LP  +  +K   T    +C  L+R P+    +  L  L + GT I ELP S  
Sbjct: 675 GCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSS 734

Query: 600 -------------------------------------------------LGRLSWVKRLI 610
                                                            + RLS +K L 
Sbjct: 735 FEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELN 794

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
           L +N +   IP +I  LS+L  L +SHC+ L+ +PELP +L LL A            LS
Sbjct: 795 LKSN-DFRSIPATINQLSRLQVLNLSHCQNLEHVPELPSSLRLLDAHGPN------LTLS 847

Query: 671 SMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP-GNEIPKWFRHQS 729
           + S + + +L N       +LS      +   S Y  +GI   +  P  + +P+W   Q 
Sbjct: 848 TASFLPFHSLVNCFNSKIQDLS--WSSCYYSDSTYRGKGI--CIVLPRSSGVPEWIMDQR 903

Query: 730 MGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             +       P      N+ + FA C V V
Sbjct: 904 SETEL-----PQNCYQNNEFLGFAICCVYV 928



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 104/218 (47%), Gaps = 38/218 (17%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRL 603
            ++++ LP+S+C FK   TF    C  LE  P+ LE+   LE L + G+ I+E+P S+ RL
Sbjct: 1120 ENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRL 1179

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
              ++ L L+   NL  +PESI +L+ L  L I+ C  L+ LPE   NLG L      SLE
Sbjct: 1180 RGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPE---NLGRLQ-----SLE 1231

Query: 664  KLPA-GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP-GNEI 721
             L      SM+  L              LSE V+              K  ++ P  N I
Sbjct: 1232 SLHVKDFDSMNCQL------------PSLSEFVQRN------------KVGIFLPESNGI 1267

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            P+W  HQ  GS  TL T P      +  + FA C++ V
Sbjct: 1268 PEWISHQKKGSKITL-TLPQNWYENDDFLGFALCSLHV 1304


>gi|3947735|emb|CAA08798.1| NL27 [Solanum tuberosum]
          Length = 821

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 276/796 (34%), Positives = 414/796 (52%), Gaps = 117/796 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FTSHL+  L  + I TF DD+ L  GD+I + LL  IE S +A+I
Sbjct: 20  YDVFLSFRGVDTRRTFTSHLYEGLKNRGIFTFQDDKRLENGDSIPEELLKAIEESQVALI 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+SRW                      FY VDPS VRKQ+ SF   F+    ++
Sbjct: 80  IFSKNYATSRWCLNELVKIMECKEEKGQIVIPIFYDVDPSEVRKQTKSFAEAFTEHESKY 139

Query: 100 P------EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                  +K+K W+ AL++AADL G+D SN  R ES  I+ I + +      +  S  K 
Sbjct: 140 ANDIEGMQKVKGWRTALSDAADLKGYDISN--RIESDYIQHIVDHISVLCKGSL-SYIKN 196

Query: 153 LVGVECSIEEIESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++   + I SLL  +   GV  + IWG+ G+ K TIA A+F+++S  FE   F  ++
Sbjct: 197 LVGIDTHFKNIRSLLAELQMSGVLIVGIWGMPGVGKTTIARAIFDRLSYQFEAVCFLADI 256

Query: 212 REAEETGGIKDLQKKLLSEL--SKDGNMRNIESQ----LNRLARKKVRIVFDDVT----- 260
           +E +   G+  LQ  LLSEL   KD  + N E       +RL  KKV +V DD+      
Sbjct: 257 KENK--CGMHSLQNILLSELLKEKDNCVNNKEDGRSLLAHRLRFKKVLVVLDDIDHIDQL 314

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                      +GSR+I TTRDK ++     N  Y +  L   DA KLF ++AF     D
Sbjct: 315 DYLAGNLDWFGNGSRIIATTRDKHLIGK---NVVYELPTLHDHDAIKLFERYAFKEQVSD 371

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
               ELT + + +A+G+PLALKV GC+   R    W SA+++++  P+ EI E LKISYD
Sbjct: 372 KCFKELTLEVVSHAKGLPLALKVFGCFFHERDITEWRSAIKQIKNNPNSEIVEKLKISYD 431

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            L+  Q+++FLDIACFL G  +D V+ I ++              KSL+++     I MH
Sbjct: 432 GLETIQQSIFLDIACFLRGRRKDYVMQILESCDFGADIGLSVLIDKSLVSISGNNTIEMH 491

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL++DMG+ +V+K+    PG+R+RLW  KD  +V+  NTGT+A+E I +     NR    
Sbjct: 492 DLIQDMGKYVVKKQK--DPGERSRLWLTKDFEEVMINNTGTKAVEAIWVP--NFNRP-RF 546

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           +  A + M +LR L  + D N C+   +E +P + +R   W   P ++L  N   +KLV 
Sbjct: 547 SKEAMTIMQRLRILCIH-DSN-CLDGSIEYLPNS-LRWFVWNNYPCESLPENFEPQKLVH 603

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GT 591
           L +  + +  LW   + LP     F   +  ++ D + L + PD   + NL+YL +    
Sbjct: 604 LDLSLSSLHHLWTGKKHLP-----FLQKL--DLRDSRSLMQTPDFTWMPNLKYLDLSYCR 656

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIP-ESIRHLSKLTFLFISHCERLQTL-----P 645
            + E+  SLG    +  L L N   L+R P  ++  L  +   F S  E+   +     P
Sbjct: 657 NLSEVHHSLGYSRELIELNLYNCGRLKRFPCVNVESLDYMDLEFCSSLEKFPIIFGTMKP 716

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL-DPNELSEIVK-----DGW 699
           EL   +GL      + +++LP+ ++  + +  +N   F +  D  EL  +++     D  
Sbjct: 717 ELKIKMGL------SGIKELPSSVTYQTHI--INKFGFRRYKDEPELESLLQMRENNDEP 768

Query: 700 MKHSLYEERGIKKSMY 715
           ++H +    GIK+S Y
Sbjct: 769 IEHCI----GIKRSRY 780


>gi|451798982|gb|AGF69189.1| TMV resistance protein N-like protein 3 [Vitis labrusca]
          Length = 1524

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 291/901 (32%), Positives = 444/901 (49%), Gaps = 148/901 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEAS--CIA 58
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S  C+ 
Sbjct: 20  YDVFLSFRGGDTRKNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRWCLN 79

Query: 59  IIIF-----SERYASSRWFFYRVDPSHVRKQSHSFGR----HFSRLRKRFPEKMKRWKNA 109
            ++      S++ +     FY VDPS VR Q  SFG     H     +   E +++W+ A
Sbjct: 80  ELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDANQEKKEMIQKWRIA 139

Query: 110 LTEAADLSGFDSN-VIRPES-------KLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           L EAA+LSG   N  ++ ES       ++++EI + +++RL+    S  K +VG+   +E
Sbjct: 140 LREAANLSGCHVNDQLKTESLQHWYETEVVKEIVDTIIRRLNHQPLSVGKSIVGIGVHLE 199

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIK 221
           +++SL+      V  + I+GIGG+ K TIA A++N+IS  ++GS F +N++E  + G I 
Sbjct: 200 KLKSLMNTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKERSK-GDIL 258

Query: 222 DLQKKLL-----SELSKDGNMRNIESQLNRLAR-KKVRIVFDDVT--------------- 260
            LQ++LL      +  K  N+    S + R  R  +V ++FDDV                
Sbjct: 259 QLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDWF 318

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
            + S +IIT+RDK VL     +  Y + +L   +A +LF  WAF  +     +  L+   
Sbjct: 319 HAKSTIIITSRDKHVLAQYGVDIPYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNI 378

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YA G+PLALKVLG  L G+    WESA+ KL+IIPH+EI  VL+IS+D LDD +K +F
Sbjct: 379 IDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIHNVLRISFDGLDDIEKGIF 438

Query: 380 LDIACFLEGEHRDEVISIFD--ASKSLINLDLFYRIR-------MHDLLRDMGREIVRKE 430
           LDIACF +G+ RD V  I    A  ++  LD    I        MHDL++ MG EI+R+E
Sbjct: 439 LDIACFFKGDDRDFVSRILGPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQE 498

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
               PG+R+RLW   +   VL +N GT AIEG+ LD  K N  + + + +F +M +LR L
Sbjct: 499 CPEDPGRRSRLW-DSNANDVLIRNKGTRAIEGLFLDRCKFN-PLQITTESFKEMNRLRLL 556

Query: 491 RFYGDKNKCMV--SHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
             +  +   +    HL     F+  E+ +L W   PL++L  N  A+ LV L +  + ++
Sbjct: 557 NIHNPREDQLFLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVLRGSNIK 616

Query: 544 QLW-----------------------DDVQRLPSSL------CTFKTPITFEII------ 568
           Q+W                        D   +P+        CT    +  E++      
Sbjct: 617 QVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCTMHGCVNLELLPRNIYK 676

Query: 569 ----------DCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNS 615
                      C  LER P+    +  L  L + GT I +LP S+  L+ ++ L+L   S
Sbjct: 677 LKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECS 736

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCT--SLEKLPAGLSSM 672
            L +IP  I HLS L  L + HC  ++  +P   C+L  L   N        +P  ++ +
Sbjct: 737 KLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQL 796

Query: 673 SSVLYVNL--CNFLK-----------LDPN------------ELSEIVK-----DGWMKH 702
           SS+  +NL  CN L+           LD +             L  +V        W KH
Sbjct: 797 SSLEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPLHSLVNCFRWAQDW-KH 855

Query: 703 SLYEE---RGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           + + +    G    +  PG++ IP+W  ++    S+ ++  P      N+ + FA C V 
Sbjct: 856 TSFRDSSYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIEL-PQNWHQNNEFLGFAICCVY 914

Query: 759 V 759
           V
Sbjct: 915 V 915



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+  T     C  LE +P+   ++E+L  L++ GT I+E+P S+ RL 
Sbjct: 1121 NLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLR 1180

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L+LSN  NL  +PESI +L+ L FL +  C   + LP+   NLG L      SL  
Sbjct: 1181 GLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPD---NLGRLQ-----SLLH 1232

Query: 665  LPAG-LSSMSSVL--YVNLCNF--LKLDPNELSEIVKDGWMKHSLYEE-RGIKKSMYFPG 718
            L  G L SM+  L     LC+   L+L    + EI  +     SL  E R   ++ +   
Sbjct: 1233 LSVGPLDSMNFQLPSLSGLCSLRQLELQACNIREIPSEICYLSSLGREFRRSVRTFFAES 1292

Query: 719  NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            N IP+W  HQ  G   T+K  P      +  + F  C++ V
Sbjct: 1293 NGIPEWISHQKSGFKITMKL-PWSWYENDDFLGFVLCSLYV 1332


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 256/746 (34%), Positives = 380/746 (50%), Gaps = 118/746 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR  FT +L+  L    ++TF DD+ L RGD I+ SLL  IE S  AI 
Sbjct: 19  WDVFLSFRGEDTRHTFTENLYRELIKHGVRTFRDDEELQRGDEIAPSLLDAIEDSAAAIA 78

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP-E 101
           + S+RYA SRW                   F++VDPS VRKQ+  F R F RL +RF  E
Sbjct: 79  VISKRYADSRWCLEELARIIECRRLLLLPVFHQVDPSDVRKQTGPFERDFKRLEERFGVE 138

Query: 102 KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           K+ RW+NA+ +A  +SG+DS +   E KLIE +  ++L +L  T     K  VG++  ++
Sbjct: 139 KVGRWRNAMNKAGGISGWDSKLWEDE-KLIESLVKNILTKLSNTPLGIPKHPVGLDSRLQ 197

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGI 220
           E+ ++L I   GV  + I+G+GG  K T+A A+FNK+  HFE   F  N+RE + +  G+
Sbjct: 198 ELMNMLDIKGNGVKVMGIYGMGGAGKSTLAKALFNKLVMHFERRSFISNIRETSNQKDGL 257

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------GSR 264
             LQK+L+ +LS D +  N+  +     +K V IV DD+                  GSR
Sbjct: 258 DALQKRLIRDLSPD-SAANVSLREVLQTQKPVLIVLDDIDDTIQLHLLAGKRRWIYEGSR 316

Query: 265 VIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQ 324
           +IITTRD Q ++    +  Y M+ L + +A +LF   AFG +       +++ K +    
Sbjct: 317 IIITTRDIQTIRAGIVDVVYEMRGLDFPEAVQLFSYHAFGREKPLPEFADISQKIVSRTG 376

Query: 325 GVPLALKVLGCYLCG-RSKEVWESAMRKLEIIP--HVEIEEVLKISYDSLDDSQKNVFLD 381
            +PLAL+V G  L   R+K +W  A  KLE  P     ++EVL+IS++ LDD QK  FLD
Sbjct: 377 NLPLALEVFGSSLFDKRTKNLWVEAFEKLEQNPPGPGRLQEVLEISFNGLDDQQKCAFLD 436

Query: 382 IACFL--EGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREI 426
           IACF   +   ++E++ +               A+KSLI +     + +HD LRDMGR I
Sbjct: 437 IACFFIKQTMEKEEIVYVLKGYGFAAETLIRDLAAKSLIKIIENDFLWIHDQLRDMGRRI 496

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR-------------- 472
           V++ES + PG R+RLW   DI  VLK   GT  I+GI+LD+ + NR              
Sbjct: 497 VQRESPD-PGNRSRLWDFNDILSVLKNEKGTRNIQGIALDI-ETNRYEASTGDIYWMNFR 554

Query: 473 -------------EIHMNSY------------AFSKMPKLRFLRFYGDKNKCMVSHLEGV 507
                        EI+ N +            +F +M  LR+L+     +  +  + + +
Sbjct: 555 RRPTFNSAIMYLKEIYKNRFHNGAANIILKTESFKQMVNLRYLQI---NDVVLNGNFKQM 611

Query: 508 PFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITF 565
           P AEV+ L+W  C L+ L    C + L  L +  +K+ +LW        S CT +  +  
Sbjct: 612 P-AEVKFLQWRGCSLENLPSEFCMQHLAVLDLSHSKIRKLWK------QSWCTERL-LLL 663

Query: 566 EIIDCKMLERLPD-----ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERI 620
            + +C  L  LPD      LE L     K     ++ +S+G L  +  L L   SNL   
Sbjct: 664 NLQNCYHLTALPDLSVHSALEKLILENCKALV--QIHKSVGDLKKLIHLNLKGCSNLTEF 721

Query: 621 PESIRHLSKLTFLFISHCERLQTLPE 646
           P  +  L  L  L ++ C +++ LP+
Sbjct: 722 PSDVSGLKLLEILDLTGCPKIKQLPD 747



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 14/149 (9%)

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT-- 587
           E L+ L++  + +E+L   +     SLC  K+     +  C+ L +LPD +  L  L   
Sbjct: 847 ESLIDLRLGSSSIEELPASI----GSLCHLKS---LSVSHCQSLSKLPDSIGGLASLVEL 899

Query: 588 -VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP- 645
            ++GT++ E+P+ +G LS +++L + N  +L  +PESI  +  LT L + +   +  LP 
Sbjct: 900 WLEGTSVTEIPDQVGTLSMLRKLHIGNCMDLRFLPESIGKMLNLTTLILDY-SMISELPE 958

Query: 646 --ELPCNLGLLSARNCTSLEKLPAGLSSM 672
             E+  +L  L    C  L++LPA + ++
Sbjct: 959 SIEMLESLSTLMLNKCKQLQRLPASIGNL 987



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 44/262 (16%)

Query: 455 TGTEAIEGISLDMNKVN--REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEV 512
           TG   I+ +  DM  +   RE+ ++  A  K+P   F             HL+     E+
Sbjct: 737 TGCPKIKQLPDDMRSMKNLRELLLDETAIVKLPDSIF-------------HLK-----EL 778

Query: 513 RHLEWPQC-PLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK 571
           R L    C  L+ +++   KL SL+        L    + +P S+ +        +  CK
Sbjct: 779 RKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSGL----EEIPDSIGSLSNLEILNLARCK 834

Query: 572 MLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
            L  +PD + NLE L    +  ++I ELP S+G L  +K L +S+  +L ++P+SI  L+
Sbjct: 835 SLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSVSHCQSLSKLPDSIGGLA 894

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSAR------NCTSLEKLPAGLSSMSSVLYVNLCN 682
            L  L++       ++ E+P  +G LS        NC  L  LP  +  M     +NL  
Sbjct: 895 SLVELWLEGT----SVTEIPDQVGTLSMLRKLHIGNCMDLRFLPESIGKM-----LNLTT 945

Query: 683 FLKLDPNELSEIVKDGWMKHSL 704
            + LD + +SE+ +   M  SL
Sbjct: 946 LI-LDYSMISELPESIEMLESL 966



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 30/200 (15%)

Query: 520  CPLKTLNICAEKLVSLKMP-----CTKVEQLW---DDVQRLPSSLCTFKTPITFEIIDCK 571
            C LK+L++   + +S K+P        + +LW     V  +P  + T        I +C 
Sbjct: 870  CHLKSLSVSHCQSLS-KLPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHIGNCM 928

Query: 572  MLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
             L  LP+   ++ NL  L +  + I ELPES+  L  +  L+L+    L+R+P SI +L 
Sbjct: 929  DLRFLPESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASIGNLK 988

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK------------LPAGLSSMSSVL 676
            +L  L++       ++ ELP  +G+LS      + K            LP  LS++S + 
Sbjct: 989  RLQHLYMEET----SVSELPDEMGMLSNLMIWKMRKPHTRQLQDTASVLPKSLSNLSLLE 1044

Query: 677  YVNLCN--FLKLDPNELSEI 694
            +++ C   F    P+E  ++
Sbjct: 1045 HLDACGWAFFGAVPDEFDKL 1064



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 69/249 (27%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRELPESLGRLS- 604
            +  LP S+   ++  T  +  CK L+RLP  + NL   ++L ++ T++ ELP+ +G LS 
Sbjct: 953  ISELPESIEMLESLSTLMLNKCKQLQRLPASIGNLKRLQHLYMEETSVSELPDEMGMLSN 1012

Query: 605  ---WVKRLI---------------LSNNSNLERI-------------------------- 620
               W  R                 LSN S LE +                          
Sbjct: 1013 LMIWKMRKPHTRQLQDTASVLPKSLSNLSLLEHLDACGWAFFGAVPDEFDKLSSLQTLNF 1072

Query: 621  --------PESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--PAGLS 670
                    P  +R LS L  L ++ C++L++LP LP +L  L   NC +LE +   A L 
Sbjct: 1073 SHNSICCLPSRLRGLSILKNLILADCKQLKSLPLLPSSLVNLIVANCNALESVCDLANLQ 1132

Query: 671  SMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-----------SMYFPGN 719
            S+  +   N    + +   E  + ++  +M         +KK           ++  PG 
Sbjct: 1133 SLQDLDLTNCNKIMDIPGLECLKSLRRLYMTGCFACFPAVKKRLAKVALKRLLNLSMPGR 1192

Query: 720  EIPKWFRHQ 728
             +P WF  +
Sbjct: 1193 VLPNWFVQE 1201


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 275/797 (34%), Positives = 411/797 (51%), Gaps = 113/797 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRGEDTR NFT HL+  L  K I TF DD+ L RG+ I+ SLL  IE S  A++
Sbjct: 21  YEVFLSFRGEDTRRNFTGHLYAALIRKGIVTFRDDEGLSRGEEIAPSLLTAIEKSRCALV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKR 98
           I SE YA SRW                      FY VDPSHVR Q   +G   +   R  
Sbjct: 81  ILSEHYADSRWCLEELAKIMEWRAEMGLIVYPVFYHVDPSHVRHQRGHYGEALADHERNG 140

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              + +RW+ ALTE A+LSG+ +     ES+++ +I   +L R        +K LVG++ 
Sbjct: 141 SGHQTQRWRAALTEVANLSGWHAEN-GSESEVVNDITRTILARFTRKHLHVDKNLVGMDD 199

Query: 159 SIEE-IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            + E I  ++ + S  V  + I+G+GGI K T+A  V+N+I+  F  + F  NVRE  ++
Sbjct: 200 RLNEVIPQMIDLSSNEVRMIGIYGLGGIGKTTVAKVVYNRIAPLFMITSFIANVREDSKS 259

Query: 218 GGIKDLQKKLLSEL--SKDGNMRNIESQL----NRLARKKVRIVFDDVTS---------- 261
            G+  LQK+LL E+  S+   + N++  +    +RL  K V ++ DDV +          
Sbjct: 260 RGLLHLQKQLLHEILPSRKNFISNVDEGIHMIQDRLCFKSVLLILDDVDTLDQLEGLAGD 319

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TTRD+ +L     +  Y +K+L   +A +LF Q AF   H    +  L
Sbjct: 320 CNWFGPGSRIIVTTRDRHLLDVHKMDAFYEVKKLDQMEAIELFSQHAFEQKHPKEDYETL 379

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           ++  ++   G+PL LKVLG +L G++   W+S ++KL+  P+ EI+ VLK SYD LD +Q
Sbjct: 380 SNSMVRCVDGLPLGLKVLGRFLFGKTILEWKSELQKLKQEPNQEIQGVLKRSYDELDLTQ 439

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           K++FLD+ACF  GE +D V  I DA              K LI +    +I MHDLL+ M
Sbjct: 440 KDIFLDVACFFNGEDKDHVTRILDACNFYAESGIRVLGDKCLITI-FDNKILMHDLLQQM 498

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE-IHMNSYAF 481
           GR IVR++  N+P K +RL +  D+ +VL + +GTEAIEGI  D++   R+ I + + +F
Sbjct: 499 GRYIVRQDYPNYPEKWSRLCYPDDVNRVLIRKSGTEAIEGILFDLSIPKRKRIDITTKSF 558

Query: 482 SKMPKLRFLRFY--------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
             M +LR L+ Y         + NK  +S     P  E+R+L W   PL++L  +  AE 
Sbjct: 559 EMMTRLRLLKIYWAHGSISIREDNKVKLSKDFEFPSYELRYLYWHGYPLESLPSSFYAED 618

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTV 588
           L+ L M  + ++QLW+  + L   L T +   +      + L  +PD      NLE L +
Sbjct: 619 LIELDMCYSSLKQLWESDEPL-EKLNTIRVSFS------QHLMEIPDFSVRAPNLEKLIL 671

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
            G +++ E+  S+GRL  +  L L N   L   P SI  +  L  L  + C  L+  P++
Sbjct: 672 DGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFP-SITDMEALEILNFAGCSELKKFPDI 730

Query: 648 PCN---------------------------LGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
            CN                           L LL  + C +L  LP  +  + S+ Y+ L
Sbjct: 731 QCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKLKSLEYLFL 790

Query: 681 CNFLKLDPNELSEIVKD 697
               KL+     EI++D
Sbjct: 791 SGCSKLE--NFPEIMED 805



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 161/396 (40%), Gaps = 111/396 (28%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKR 608
            LP S+C  ++  T  +  C  L++LP  + +L++L      GT IR+ P+S+  L  ++ 
Sbjct: 846  LPDSMCNLRSLQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRGLRV 905

Query: 609  LI--------------------------------------LSNNSNLER----------- 619
            LI                                      LS+ +NL +           
Sbjct: 906  LIYPGCKILPSSSLSSLFSFWLLHGRGSNGIGLRLPSFPCLSSLTNLNQSSCNPSRNNFL 965

Query: 620  -IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
             IP SI  L+ L  L++  C+ L  +PELP ++  +++R+CTSL    + +S +  + ++
Sbjct: 966  SIPTSISALTNLRDLWLGQCQNLTEIPELPPSVPDINSRDCTSLSLSSSSISMLQWLQFL 1025

Query: 679  -------------------------NLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKS 713
                                     NL +F   +P+  +  V    +K   +E   +  S
Sbjct: 1026 FYYCLKPVEEQFNDDKRDALQRFPDNLVSFSCSEPSPSNFAV----VKQKFFE--NVAFS 1079

Query: 714  MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLKYFRHKSG 772
            M  PG+ IPKW  H++MGS   +K + P     +  + FA C+V+   P   +   H S 
Sbjct: 1080 MILPGSGIPKWIWHRNMGS--FVKVKLPTDWYDDDFLGFAVCSVLEHVPD--RIVCHLS- 1134

Query: 773  EDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGG----EYFGPN-- 826
             D  D   Y    D+     GH    F  K S V S+HV+LG          +   PN  
Sbjct: 1135 PDTLD---YGELRDF-----GHD---FHCKGSDVSSEHVWLGYQPCAQLRMFQVNDPNEW 1183

Query: 827  -YDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             + E SF    + H         VK+CG+  +YA+D
Sbjct: 1184 SHMEISFE---ATHRLSSRASNMVKECGVRLIYAED 1216



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
           ++  LP+ +   K+     +  C  LE  P+   ++ENL+ L + GT+I  LP S+ RL 
Sbjct: 771 NLTSLPTCIFKLKSLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLK 830

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            +  L L     L  +P+S+ +L  L  + +S C +L  LP+   N+G L
Sbjct: 831 GLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQLPK---NVGSL 877


>gi|27764547|gb|AAO23077.1| R 8 protein [Glycine max]
          Length = 892

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 262/750 (34%), Positives = 368/750 (49%), Gaps = 105/750 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF G+DTR  FT +L+  L  + I TFIDDQ L RGD I  +L   I+ S IAI 
Sbjct: 12  YDVFLSFTGQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAIT 71

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S+ YASS +                     FY+VDPSHVR Q  S+G   ++ +KRF 
Sbjct: 72  VLSQNYASSSFCLDELVTILHCKSQGLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFK 131

Query: 101 ---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              EK+++W+ AL + ADLSG+   +    E + I  I  ++ ++            VG+
Sbjct: 132 ANKEKLQKWRMALHQVADLSGYHFKDGDSYEYEFIGSIVEEISRKFSRASLHVADYPVGL 191

Query: 157 ECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           E  + E+  LL +GS  V  +  I G+GG+ K T+A AV N I+ HF+ S F  NVRE  
Sbjct: 192 ESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREES 251

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS-------- 261
              G+K LQ  LLS+L  + ++     Q       +RL RKKV ++ DDV          
Sbjct: 252 NKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIV 311

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSRVIITTRDK +LK     + Y +K L  + A +L    AF  + +D S+ 
Sbjct: 312 GRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSYE 371

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           ++ ++ + YA G+PLAL+V+G  L  ++   WESAM   + IP  EI+E+LK+S+D+L +
Sbjct: 372 DVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALGE 431

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHDLL 419
            QKNVFLDIAC  +G    EV +I                  KSL+ +     + MHD++
Sbjct: 432 EQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMI 491

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--IHMN 477
           +DMGREI R+ S   PGK  RL   KDI QVLK NTGT  IE I LD +  ++E  +  N
Sbjct: 492 QDMGREIERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICLDFSISDKEETVEWN 551

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
             AF KM  L+ L        C  S         +R LEW + P   L  N     LV  
Sbjct: 552 ENAFMKMKNLKILII----RNCKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVIC 607

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTI 593
           K+P + +            S              C+ L ++PD  +L NL+ L+      
Sbjct: 608 KLPDSSITSF-----EFHGSSKKLGHLTVLNFDRCEFLTKIPDVSDLPNLKELS------ 656

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
                     +W + L+         + +SI  L+KL  L    C +L + P  P NL  
Sbjct: 657 ---------FNWCESLV--------AVDDSIGFLNKLKTLSAYGCRKLTSFP--PLNLTS 697

Query: 654 LSARN---CTSLEKLPAGLSSMSSVLYVNL 680
           L   N   C+SLE  P  L  M ++  + L
Sbjct: 698 LETLNLGGCSSLEYFPEILGEMKNITVLAL 727



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           R + V  L L  N N   +PE  + L  LT L +  C+ LQ +  LP NL    ARNC S
Sbjct: 817 RFAHVGYLNLPGN-NFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPNLKHFDARNCAS 875

Query: 662 LEKLPAGLSSMSSVLYVNLCNFL 684
           L       SS  S+L   + +FL
Sbjct: 876 LT------SSSKSMLLNQVLSFL 892


>gi|332330342|gb|AEE43928.1| TIR-NBS-LRR resistance protein muRdr1D [Rosa multiflora]
          Length = 1156

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 263/748 (35%), Positives = 398/748 (53%), Gaps = 84/748 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  LL  IE S  AII
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYHELERQGIRTFRDDPQLERGTAISPELLTAIEQSRFAII 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEYEEKFG 138

Query: 101 E---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVG 155
           E   +++ W++ALT+ A L+G+ S     E++LI+EI  ++  ++  +  +   ++ L G
Sbjct: 139 EDNEEVEGWRDALTKVASLAGWTSESYY-ETQLIKEIVKELWSKVHPSLTAFGSSEKLFG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EEI+ LL   +  V  + IWG+GGI K T+A  V+ KIS  FE   F  NVREA 
Sbjct: 198 MDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYLKISHQFEVCIFLANVREAS 257

Query: 216 ETG-GIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
           +T  G+ DLQK++LS++ K+ N++  N+ S +  + +    K V ++ DDV         
Sbjct: 258 KTTYGLVDLQKQILSQILKEENVQVWNVYSGITIIKKCVCNKAVLLILDDVDQSEQLDNL 317

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTRD+ VL      K Y +K L   +A +LF   AF     +  +
Sbjct: 318 VGEKDCFGLRSRIIITTRDRHVLVTHGVEKPYELKGLNEDEALQLFSWKAFRNCKPEEYY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E     + YA G+PLALK+LG +L GR+ + W SA+ KL+  P+  + E+LKIS+D LD
Sbjct: 378 AEPCKSFVMYAAGLPLALKILGSFLNGRTPDEWNSALAKLQQTPYRTVFEILKISFDGLD 437

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF      + +I + D+S             KSL+ +    ++ +HDL+
Sbjct: 438 EVEKKIFLDIACFRRLYRNEFMIELVDSSDPCNRITRSVLAEKSLLTISSNNQVDVHDLI 497

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            +MG EIVR+E+   PG R+RL    DI+ V   NTGTEAIEGI LD+ ++  E   N  
Sbjct: 498 HEMGCEIVRQEN-EEPGGRSRLCLRDDIFHVFTMNTGTEAIEGILLDLAEL-EEADWNFE 555

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           AF KM KL+ L  +  +      +L       +R L+W   P K+L      ++L  L +
Sbjct: 556 AFFKMCKLKLLYIHNLRLSLGPKYLPNA----LRFLKWSWYPSKSLPPGFQPDELAELSL 611

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIR 594
             +K++ LW+ ++ L          +++ I     L+R PD   ++NLE L +KG T + 
Sbjct: 612 AYSKIDHLWNGIKYLGK---LKSIDLSYSI----NLKRTPDFTGIQNLEKLVLKGCTNLV 664

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++  S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE    +  L
Sbjct: 665 KIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRL 723

Query: 655 S--ARNCTSLEKLPAGLSSMSSVLYVNL 680
           S      T++EKLP+ +  + S   V L
Sbjct: 724 SKLCLGGTAVEKLPSSIEHLMSESLVEL 751



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 137/309 (44%), Gaps = 49/309 (15%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
            E+P  +G LS ++RL L  N N   +P SI  L KL  + + +C+RLQ LP+LP +  L 
Sbjct: 815  EIPNDIGSLSSLERLELRGN-NFVSLPVSIHLLFKLQGIDVQNCKRLQQLPDLPVSRSLQ 873

Query: 654  LSARNCTSLEKLP---------------------AGLSSMSSVLYVNLCNFLKL---DPN 689
            + + NCTSL+ LP                      G    S  LY  L   L++     +
Sbjct: 874  VKSDNCTSLQVLPDPPDLCRLSYFSLNCVNCLSTVGNQDASYFLYSVLKRLLEVLSLSLS 933

Query: 690  ELSEIVKDGW----MKHSLYEERGIKKSMY-FPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
                +    W    M H     R  ++  +  PG+EIP+WF +QS+G S T K   P  A
Sbjct: 934  LSLSLSLSQWLCDMMVHMQETPRSFRRFRFVIPGSEIPEWFDNQSVGDSVTEKL--PSGA 991

Query: 745  GYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLG-KI 803
              NK I FA CA+ V P       + S   +  G V   C  W R +   + S   G  +
Sbjct: 992  CNNKWIGFAVCALFV-PQ-----DNPSAVPEDPGLVPDTCEIWCRWNSDGISSGGHGFPV 1045

Query: 804  SYVESDHVFLGCNSFGGEYFGPNYD----EFSFRIHCSFHFPPYLERGEVKKCGIHFVYA 859
                SDH+FL    F   +  P+Y     +F F++  +      +   +VKKCG+  +Y 
Sbjct: 1046 KQFVSDHLFLLV--FPSPFRNPDYTWNEVKFFFKVTRAVGNNTCI---KVKKCGVRALYE 1100

Query: 860  QDSADHILK 868
             D+ + I K
Sbjct: 1101 HDTEELISK 1109


>gi|356559367|ref|XP_003547971.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 264/792 (33%), Positives = 400/792 (50%), Gaps = 109/792 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT +L++VL  + I TFIDD +  +GD I+ +L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRYSFTGNLYNVLRERGIHTFIDDDEFQKGDQITSALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY VDPS VR    SFG     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKNDLLVLPVFYIVDPSDVRHHRGSFGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L     E ++ WK AL + +++SG  F  +  + E K I+EI   V  + +         
Sbjct: 128 LNSDNMENLETWKMALHQVSNISGHHFQHDGNKYEYKFIKEIVESVSSKFNHALLQVPDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG+E  + E++SLL +GS+ V  +  I G+GG+ K T+A AV+N I+ HFE S F  NV
Sbjct: 188 LVGLESPVLEVKSLLDVGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIAGHFEASCFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS---- 261
           RE     G++ LQ  LLS+   +  ++       I    ++L +KKV ++ DDV      
Sbjct: 248 RETSNKKGLQHLQSILLSKTVGEKKIKLTNWREGIPIIKHKLKQKKVLLILDDVDEHKHL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HL 308
                       GSRVIITTR++ +L        Y+++EL    A +L  Q AF  +  +
Sbjct: 308 QAIIGSPDWFGCGSRVIITTRNEHLLALHNVKITYKVRELNEKHALQLLTQKAFELEKEV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D+S+ ++ ++A+ YA G+PLAL+V+G  L G+S + WESA+   E IP   I  +LK+SY
Sbjct: 368 DSSYNDILNRALIYASGLPLALEVIGSNLFGKSIKEWESALNGYERIPDKSIYMILKVSY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDL---FY 411
           D+L++ +K++FLDIAC  +     E+  I  A               KSLIN+     + 
Sbjct: 428 DALNEDEKSIFLDIACCFKDYELGELQDILYAHYGRCMKYHIGVLVKKSLINIHGSWDYK 487

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            +R+HDL+ DMG+EIVR+ES   PGKR+RLW H+DI QVL++N GT  IE I ++ +   
Sbjct: 488 VMRLHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSSFG 547

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            E+  +  AF KM  L+ L     K+ C     + +P   +R LEW +CP +    N   
Sbjct: 548 EEVEWDGDAFKKMKNLKTLII---KSDCFTKGPKYLP-NTLRVLEWKRCPSRDWPHNFNP 603

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV- 588
           ++L   K+                SS  + +    FE               NL  L + 
Sbjct: 604 KQLAICKLR--------------HSSFTSLELAPLFE-----------KRFVNLTILNLD 638

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           K  ++ E+P+ +  LS +++L  +   NL  I  S+  L KL  L+   C  L++ P L 
Sbjct: 639 KCDSLTEIPD-VSCLSKLEKLSFARCRNLFTIHYSVGLLEKLKILYAGGCPELKSFPPLK 697

Query: 649 -CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN--ELSEIVKDGWMKHS 703
             +L       C +LE  P  L  M ++  ++L  C   +  P+   L+ + ++ ++   
Sbjct: 698 LTSLEQFELSGCHNLESFPEILGKMENITVLDLDECRIKEFRPSFRNLTRL-QELYLGQE 756

Query: 704 LYEERGIKKSMY 715
            Y  RG   + +
Sbjct: 757 TYRLRGFDAATF 768


>gi|12056928|gb|AAG48132.1|AF322632_1 putative resistance protein [Glycine max]
          Length = 1093

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 276/771 (35%), Positives = 391/771 (50%), Gaps = 120/771 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGEDTR +FT +L++ L  + I TFI D     G+ I  SL   IE S + +
Sbjct: 13  VYDVFLSFRGEDTRRSFTGNLYNCLEKRGIHTFIGDYDFESGEEIKASLSEAIEHSRVFV 72

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FSE YASS W                      F+ V+PSHVR Q   +G   +   +R
Sbjct: 73  IVFSENYASSSWCLDGLVRILDFTEDNHRPVIPVFFDVEPSHVRHQKGIYGEALAMHERR 132

Query: 99  F-PE--KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
             PE  K+ +W+NAL +AA+LSG+   +    E KLIE+I  D+  ++  +    ++  V
Sbjct: 133 LNPESYKVMKWRNALRQAANLSGYAFKHGDGYEYKLIEKIVEDISNKIKISRPVVDRP-V 191

Query: 155 GVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G+E  + E++ LL   S  GV  + I GIGGI K T+A AV++  + HF+ S F  NVRE
Sbjct: 192 GLEYRMLEVDWLLDATSLAGVHMIGICGIGGIGKTTLARAVYHSAAGHFDTSCFLGNVRE 251

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTS------ 261
                G+  LQ+ LL+E+ ++ N+R  ++E  ++     L RK++ +V DDV        
Sbjct: 252 NAMKHGLVHLQQTLLAEIFRENNIRLTSVEQGISLIKKMLPRKRLLLVLDDVCELDDLRA 311

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRD+ +LK    +K Y ++ L   +A +L C  AF  D +   
Sbjct: 312 LVGSPDWFGPGSRVIITTRDRHLLKAHGVDKVYEVEVLANGEALELLCWKAFRTDRVHPD 371

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            I   ++AI +A G+PLAL+++G  L GR  E WES + + E  P  +I   LKIS+D+L
Sbjct: 372 FINKLNRAITFASGIPLALELIGSSLYGRGIEEWESTLDQYEKNPPRDIHMALKISFDAL 431

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
              +K VFLDIACF  G    E+  I  A               KSLI +D   R++MHD
Sbjct: 432 GYLEKEVFLDIACFFNGFELAEIEHILGAHHGCCLKFHIGALVEKSLIMIDEHGRVQMHD 491

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++ MGREIVR+ES  HPGKR+RLW  +DI  VL+ NTGT  I+ I LD +K  + +  +
Sbjct: 492 LIQQMGREIVRQESPEHPGKRSRLWSTEDIVHVLEDNTGTCKIQSIILDFSKSEKVVQWD 551

Query: 478 SYAFSKMPKLRFLRFY-----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
             AF KM  LR L        G KN           F  ++ LEW  CP K+L  +   E
Sbjct: 552 GMAFVKMISLRTLIIRKMFSKGPKN-----------FQILKMLEWWGCPSKSLPSDFKPE 600

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
           KL  LK+P +    L      LP+ L      + F+   C+ L R PD            
Sbjct: 601 KLAILKLPYSGFMSL-----ELPNFL--HMRVLNFD--RCEFLTRTPD------------ 639

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                    L     +K L      NL  I +S+  L KL  +    C +L+T P  P  
Sbjct: 640 ---------LSGFPILKELFFVFCENLVEIHDSVGFLDKLEIMNFEGCSKLETFP--PIK 688

Query: 651 LGLLSARN---CTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVK 696
           L  L + N   C+SL   P  L  M ++ +++L      KL PN + E+V+
Sbjct: 689 LTSLESINLSHCSSLVSFPEILGKMENITHLSLEYTAISKL-PNSIRELVR 738



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 37/228 (16%)

Query: 551 RLPSSLCTFKTPITFEIIDCKML--ERLPDELEN---------LEYLTVKGTTIRE--LP 597
           +LPSS+ T +      I  C+ L   +  ++++N         L+ + +   +I +  + 
Sbjct: 751 QLPSSIVTLRELEVLSICQCEGLRFSKQDEDVKNKSLLMPSSYLKQVNLWSCSISDEFID 810

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
             L   + VK L LS N N   +P  I+    L  L++ +C  L  +  +P NL  LSA 
Sbjct: 811 TGLAWFANVKSLDLSAN-NFTILPSCIQECRLLRKLYLDYCTHLHEIRGIPPNLETLSAI 869

Query: 658 NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI---------------------VK 696
            CTSL+ L   +   S+     L   +  D   L EI                      +
Sbjct: 870 RCTSLKDLDLAVPLESTKEGCCLRQLILDDCENLQEIRGIPPSIEFLSATNCRSLTASCR 929

Query: 697 DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
              +K  L+E    + S+  PG  IP+WF H S G S +   R   P 
Sbjct: 930 RMLLKQELHEAGNKRYSL--PGTRIPEWFEHCSRGQSISFWFRNKFPV 975


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 262/775 (33%), Positives = 387/775 (49%), Gaps = 129/775 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SF G+DTR +FT +L++ L  K I TF DD +L +G+ IS  LL  I+ S IAII
Sbjct: 15  YDVFISFYGDDTRYSFTGYLYNTLCQKGINTFKDDIKLKKGEEISTDLLQAIDESRIAII 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR--- 96
           + SE YASS W                      F+ VDPS+VR Q  SF R  ++     
Sbjct: 75  VCSENYASSPWCLDELVKIMECKEEKGQLVCIVFFYVDPSNVRHQRKSFARSMAKHEENP 134

Query: 97  KRFPEKMKRWKNALTEAADLSG--FDSNVIRP--------------------------ES 128
           K   EK+ +W++AL++AA+LSG  F                                 E 
Sbjct: 135 KISEEKISKWRSALSKAANLSGWHFKHGERERERERERERERERERERERERERDWLYEY 194

Query: 129 KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGV-----CKLRIWGIG 183
           +LI+EI  ++ ++L+ T        VG+   I +I SLL   S        C + I GIG
Sbjct: 195 ELIQEITEEMSRKLNLTPLHIADHPVGLNYKISQIMSLLENKSNDDDDVDVCMVGICGIG 254

Query: 184 GISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKL-----LSELSKDGNMR 238
           GI K T+A AV+N +SR F+ S F ++VRE     G+  LQ+ L        +  D   +
Sbjct: 255 GIGKTTLARAVYNSMSRKFDSSSFVVDVRENSMKHGLVHLQETLLLHLLFENIKLDDVSK 314

Query: 239 NIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANK 282
            I     RL  KKV ++ DDV +                GS++IITTRDK +L      K
Sbjct: 315 GIPIIKRRLRNKKVLLILDDVDNLQQLRSLVGRRDWFGFGSKIIITTRDKHLLAAHGVKK 374

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y +KEL   ++ +LF   AF  +  DAS+ E+    ++YA+G PLAL V+G  L G++ 
Sbjct: 375 LYEVKELNDHESLELFSMNAFRKNVPDASYGEIVKCVVQYAKGHPLALNVIGSDLFGKTV 434

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS- 401
           E W+SA+ K E IP+ EI  VLK+SYD+LDD++K +FLDIACF +G  + +V    DAS 
Sbjct: 435 EEWKSALNKYETIPNKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVEKTLDASR 494

Query: 402 ------------KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ 449
                       KSL+ +     ++MHDL+ D+G++I RKES   P KR RLWHH+D+ +
Sbjct: 495 FYSKYGIGVLVDKSLVTISESNSVKMHDLIEDLGKDIARKESPFDPSKRRRLWHHEDVLE 554

Query: 450 VLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF 509
           VL +N GT+ IEGI LDM  + +E+ + +  F  M +LR L     +N  +    + +P 
Sbjct: 555 VLTENMGTDTIEGIVLDMPNLKQEVQLKANTFDDMKRLRILIV---RNGQVSGAPQNLP- 610

Query: 510 AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEI 567
             +R LEW + PL +L  +   + LV L +P + +         +      F+       
Sbjct: 611 NNLRLLEWNKYPLTSLPDSFHPKTLVVLNLPKSHI--------TMDEPFKKFEHLTFMNF 662

Query: 568 IDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            DC  L +LPD              +   P        + R++++N  NL  I ESI  L
Sbjct: 663 SDCDSLTKLPD--------------VSATPN-------LTRILVNNCENLVDIHESIGDL 701

Query: 628 SKLTFLFISHCERLQTLPE--LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
            KL  L    C  L++ P       L  L+ R C+S++  P  L+ + ++  +++
Sbjct: 702 DKLVTLSTEGCPNLKSFPRGLRSKYLEYLNLRKCSSIDNFPDVLAKVENMKNIDI 756



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 89/232 (38%), Gaps = 69/232 (29%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGT-------------- 591
           +++ PSS+  FK      +  C  +E LP   D  +N++ L V+G               
Sbjct: 761 IKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNIDELNVEGCPQLPKLLWKSLENR 820

Query: 592 TIRELPESLGRLSW-------------------VKRLILSNNSNLERIPESIRHLSKLTF 632
           T   LP+ L  LS                    +K LILS+N N   IP  I+ LS L  
Sbjct: 821 TTDWLPK-LSNLSLKNCNLSDEDLELILKCFLQLKWLILSDN-NFLTIPVCIKDLSHLLL 878

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           L I +C+ L+ +  LP  L  + AR C                        + L P+  S
Sbjct: 879 LNIENCKHLRDISVLPPYLQYIDARMC------------------------MALTPHS-S 913

Query: 693 EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
           E++    +  +  E   I   +  P  +IP WF H + G S +   R   PA
Sbjct: 914 EVL----LSQAFQEVEYI--DIVVPRTKIPSWFDHCNKGESISFWIRKSFPA 959


>gi|356561221|ref|XP_003548881.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1126

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 267/762 (35%), Positives = 387/762 (50%), Gaps = 88/762 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFR EDTR  FT +L++VL  + I TFIDD +  + D I+++L   I+ S I II
Sbjct: 8   YDVFLSFRREDTRHGFTGNLYNVLRERGIHTFIDDDEPQKADQITKALEEAIKNSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+VDPS VR    SFG     H   
Sbjct: 68  VLSENYASSFFCLNELTHILNFTKGWDDVLVLPVFYKVDPSDVRHHRGSFGEALANHEKN 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L   +  K+K WK AL + ++ SG  F  +  + E K I+EI   V  +L+      +  
Sbjct: 128 LNSNYMGKLKTWKMALRQVSNFSGHHFQPDGNKYEYKFIKEILESVSNKLNGDHLYVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG+E  + E++ LL +G + V  +  I G+ G+ K T+A AV+N I  HFE S F  NV
Sbjct: 188 LVGLESPLLEVKELLDVGRDDVVHMVGIHGLPGVGKTTLAVAVYNSIVDHFEASCFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELS---KDGNMRNIESQLNR-LARKKVRIVFDDVTS------ 261
           RE     G+  LQ  LLS+     K  N R   + + R L +KKV ++ DDV        
Sbjct: 248 RETSNKNGLVHLQSVLLSKTDGEIKLANSREGSTIIQRKLKQKKVLLILDDVDEHKQLQA 307

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD-HLDA 310
                     GSRVIITTRD+ +L        Y ++EL    A +L  Q AF  +  +D 
Sbjct: 308 IIGNPDWFGRGSRVIITTRDEHLLALHKVKITYEVRELNKKHALQLLTQKAFELEKEVDP 367

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++AI YA G+PLAL+V+G  L G+S E WESA+   E IP  +I ++LK+SYD+
Sbjct: 368 SYHDILNRAITYASGLPLALEVMGSNLFGKSIEEWESALDGYERIPDKKIYDILKVSYDA 427

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR--IR 414
           L++ +K++FLDIAC  +      V  I  A               KSLIN+  +    +R
Sbjct: 428 LNEDEKSIFLDIACGFKDYELTYVQDILYAHYGRCMKYHIGVLVKKSLINIHCWPTKVMR 487

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           +HDL+ DMG+EIVR+ES   PGKR+RLW H+DI QVL++N GT  IE I ++ +    E+
Sbjct: 488 LHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTRKIEIICMNFSSFGEEV 547

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
             +   F KM  L+ L    D   C     + +P   +R LEW +CP +    N   ++L
Sbjct: 548 EWDGDGFKKMENLKTLIIKSD---CFSKGPKHLP-NTLRVLEWSRCPSQEWPRNFNPKQL 603

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID-CKMLERLPDE--LENLEYLTV- 588
              K+P + +  L     RL          +T  I+D C     +PD   L NLE L+  
Sbjct: 604 AICKLPHSSITSL-----RLAPLFKKRLVNLTSLILDECDSFRWIPDVSCLSNLENLSFR 658

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           K   +  +  S+G L  +K L  +    L+  P     L+ L     S C  L++ PE+ 
Sbjct: 659 KCRNLFTIHHSVGLLEKLKILDAAGCPKLKSFPP--LKLTSLERFEFSGCYNLKSFPEIL 716

Query: 649 C---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
               N+  LS   C ++ KLP    +++ +  + L  F+K D
Sbjct: 717 GKMENMTQLSWTGC-AITKLPPSFRNLTRLQLLVLTTFIKYD 757



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 76/200 (38%), Gaps = 56/200 (28%)

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLS 604
           L DDV +L S +C+    +T E         L DEL               LP  L    
Sbjct: 786 LPDDVLKLTSVVCSSVQSLTLE---------LSDEL---------------LPLFLSCFV 821

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            VK+L LS  S    IPE I+    LT L + +C RLQ +  +P NL +LSA +      
Sbjct: 822 NVKKLNLSW-SKFTVIPECIKECRFLTTLTLDYCYRLQEIRGIPPNLKILSAMDS----- 875

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
            PA  SS  S+L                       +   L+E      S+  P  +IP+W
Sbjct: 876 -PALNSSSISML-----------------------LNQELHEAGDTDFSL--PRVQIPEW 909

Query: 725 FRHQSMGSSATLKTRPPRPA 744
           F   S G       R   PA
Sbjct: 910 FECHSWGPPICFWFRNKFPA 929


>gi|359493394|ref|XP_002279512.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 264/768 (34%), Positives = 393/768 (51%), Gaps = 89/768 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFRGEDTR+NFT HL   L    IKTF DDQL RG+ I   LL TIE S I+I++
Sbjct: 20  FEVFLSFRGEDTRNNFTDHLFVNLHGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKRF 99
           FS+ YA S+W                      FY VDP  VRKQ+ SFG  FS   R   
Sbjct: 80  FSKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHVDPCDVRKQTGSFGEAFSFHERNVD 139

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVEC 158
            +K++RW+++LTEA++LSGF  N    ESK I+EI N + KR +++     N  +V ++ 
Sbjct: 140 GKKVQRWRDSLTEASNLSGFHVND-GYESKHIKEIINQIFKRSMNSKLLHINNDIVEMDF 198

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++E++SLL      +  + I+G GGI K TIA  V+N+I   F G+ F  +VRE    G
Sbjct: 199 RLKELKSLLSSDLNDIRVVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKG 258

Query: 219 GIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVTS------------ 261
               LQ++LL + +  D    NI   +N    RL  KKV IV DDV              
Sbjct: 259 CQLQLQQQLLHDTVGNDVEFSNINKGINIIKSRLRSKKVLIVIDDVDRLQQLESVVGSPK 318

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS +IITTRD+ +L        ++  EL Y +A +LF Q AF  +     +++L++
Sbjct: 319 WFGLGSTIIITTRDQHLLVEYGVTISHKATELHYEEALQLFSQHAFKQNVPKEDYVDLSN 378

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             ++YAQG+PLALKVLG  L G + + W+SA  KL+  P  EI +VL+IS+D LD SQK 
Sbjct: 379 CMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKLKKNPMKEINDVLRISFDGLDPSQKE 438

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           VFLDIACF + E +  V  I D               + L+ + L   I+MHDL+++MG 
Sbjct: 439 VFLDIACFFKDECKYFVSRILDGCNLFATCNIRVLCDRCLVTI-LDSVIQMHDLIQEMGW 497

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
            IVR+ES   P K +RLW   DI+    K    E ++GI L     N +  +    FS M
Sbjct: 498 AIVREESPGDPCKWSRLWDVDDIHDAFSKQERFEELKGIDLS----NSKQLVKMPKFSSM 553

Query: 485 PKLRFLRFYGDKNKC----MVSHLEGVPFAEV----------RHLEWPQCPLKTLNICAE 530
           P L  L   G  + C     +  L+ + +  +            +++    +  LN C  
Sbjct: 554 PNLERLNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSMKFESLEVLYLNCCPN 613

Query: 531 ----KLVSLKMPCTKVEQLWDD-VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEY 585
                 +   M C K   L +  +Q LPSS+    +     + DC   E+ P+   N+++
Sbjct: 614 LKKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKF 673

Query: 586 LT---VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           L    ++G +     P++   +  ++ L L   S ++ +P SI +L  L  L IS C + 
Sbjct: 674 LRELYLEGCSKFENFPDTFTYMGHLRGLHL-RKSGIKELPSSIGYLESLEILDISCCSKF 732

Query: 642 QTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           +  PE+  N+  L       T++++LP  + S++S+  ++L   LK +
Sbjct: 733 EKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFE 780



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 159/395 (40%), Gaps = 92/395 (23%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDC---KMLERLPDELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  K+     +  C   K    + +++E LE L +  T I ELP S+  L 
Sbjct: 919  NLKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCETGISELPSSIEHLR 978

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
             +K L L N  NL  +P SI +L+ LT L + +C +L  LP+    L C L +L    C 
Sbjct: 979  GLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCN 1038

Query: 661  SL-EKLPAGLSSMSSVLYVN---------------LCNF--LKLDPNELSEIVKD----- 697
             + E++P+ L  +S ++++N               LC    L ++   + E++ +     
Sbjct: 1039 LMEEEIPSDLWCLSLLVFLNISESRMRCIPAGITQLCKLRILLMNHCPMLEVIGELPSSL 1098

Query: 698  GWMKH----SLYEERGIKK-----------------SMYFPGNE-IPKWFRHQSMGSSAT 735
            GW++     SL  E                      ++  PG+  IP+W  HQ MG   +
Sbjct: 1099 GWIEAHGCPSLETETSSSLLWSSLLKHLKSPIQQQFNIIIPGSSGIPEWVSHQRMGCEVS 1158

Query: 736  LKTRPPRPAGYNKLISFAFC---------AVVVFPAFLKYFRHKSGEDD----------- 775
            ++  P      N L+ F              V    F+ + + +    D           
Sbjct: 1159 VEL-PMNWYEDNNLLGFVLFFHHVPLDDDECVRTSGFIPHCKLEISHGDQSKRLDNIGFH 1217

Query: 776  ------W-DGNVY-AVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGP-N 826
                  W  G  Y + C D    S+  L+  +  +I  + S +     N+F   +  P  
Sbjct: 1218 PHCKTYWISGLSYGSTCYDSGSTSDPALWVTYFPQIG-IPSKYRSRKWNNFKAHFDNPVG 1276

Query: 827  YDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
               F+   + SF         +VK CGIH +YAQD
Sbjct: 1277 NASFTCGENASF---------KVKSCGIHLIYAQD 1302



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 19/160 (11%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   ++     +  C   E+ P+    ++ L+ L++  T I++LP S+GRL  
Sbjct: 802 IKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKLPNSIGRLQA 861

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
           +  L LS  SNLER PE  +++  L  LF+        +  LP ++G L+        NC
Sbjct: 862 LGSLTLSGCSNLERFPEIQKNMGNLWALFLDE----TAIEGLPYSVGHLTRLDRLNLENC 917

Query: 660 TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKD 697
            +L+ LP  +  + S+  L +N C+ LK      SEI +D
Sbjct: 918 KNLKSLPNSICELKSLEGLSLNGCSNLK----AFSEITED 953



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 30/176 (17%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSW 605
           +Q LP+S+ +  +     +  C   E+  D   N   L  L +  + I+ELP S+G L  
Sbjct: 755 IQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLYRSGIKELPGSIGYLES 814

Query: 606 VKRLILSNNSNLERIPE-----------------------SIRHLSKLTFLFISHCERLQ 642
           ++ L LS  SN E+ PE                       SI  L  L  L +S C  L+
Sbjct: 815 LENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKLPNSIGRLQALGSLTLSGCSNLE 874

Query: 643 TLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
             PE+  N+G L A   + T++E LP  +  ++ +  +NL  C  LK  PN + E+
Sbjct: 875 RFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDRLNLENCKNLKSLPNSICEL 930



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 28/155 (18%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LPSS+   ++    +I  C   E+ P+    ++ L+ L ++ T I+ELP S+G L+ 
Sbjct: 708 IKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTS 767

Query: 606 VKRLILSN-----------------------NSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L L                          S ++ +P SI +L  L  L +S+C   +
Sbjct: 768 LEILSLEKCLKFEKFSDVFTNMGRLRELCLYRSGIKELPGSIGYLESLENLNLSYCSNFE 827

Query: 643 TLPELPCNLGLLS--ARNCTSLEKLPAGLSSMSSV 675
             PE+  N+  L   + + T+++KLP  +  + ++
Sbjct: 828 KFPEIQGNMKCLKELSLDNTAIKKLPNSIGRLQAL 862


>gi|357513265|ref|XP_003626921.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520943|gb|AET01397.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2300

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 257/774 (33%), Positives = 396/774 (51%), Gaps = 94/774 (12%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
            YDVF++FRG DTR  F SHL+  L+   I TF+D++ L +G  +   L+  I+ S IAI+
Sbjct: 1190 YDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQIAIV 1249

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS+ Y  SRW                      FY + PS++R+ + +    FS     F
Sbjct: 1250 VFSKNYVHSRWCLSELKQIMECKANDGQVVMPVFYCITPSNIRQYAVT---RFSETTLFF 1306

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             E +  + N L +A+ LSG+D +    ESK+++EI + VLK LD  +       VG+E  
Sbjct: 1307 DE-LVPFMNTLQDASYLSGWDLSNYSNESKVVKEIVSQVLKNLDNKYLPLPDFQVGLEPR 1365

Query: 160  IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETG 218
             E+    L   + GVC + IWG+GGI K TIA  ++N +   FE   F  N+RE  E+  
Sbjct: 1366 AEKSIRFLRQNTRGVCLVGIWGMGGIGKSTIAKVIYNDLCYEFENQSFLANIREVWEKDR 1425

Query: 219  GIKDLQKKLLSELSKDGNMRNIESQLNR------LARKKVRIVFDDVTS----------- 261
            G  DLQ++ LS++ K   ++ +  +  +      L  K++  V DDV+            
Sbjct: 1426 GRIDLQEQFLSDILKTRKIKVLSVEQGKTMIKQQLRAKRILAVLDDVSELEQFDALCQRN 1485

Query: 262  ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
                GS +IITTRD +VL     +  Y  +EL  +++ +LFC+ AF         + L+ 
Sbjct: 1486 SVGPGSIIIITTRDLRVLNILEVDFIYEAEELNASESLELFCKHAFRKAIPTQDFLILSR 1545

Query: 318  KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS-QK 376
              + Y  G+PLAL+VLG YL  R K+ W S + KLE IP+ +I E+LKIS+D L D  +K
Sbjct: 1546 DVVAYCGGIPLALEVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEILKISFDGLKDRMEK 1605

Query: 377  NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
            N+FLD+ CF  G+ R  V  I +               +SLI ++   ++ MH LLRDMG
Sbjct: 1606 NIFLDVCCFFIGKDRAYVTKILNGCGLNADIGITVLIERSLIKVEKNKKLGMHALLRDMG 1665

Query: 424  REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            REIVR+ S   P K  RLW H+D+  VL   TGT+AIEG+ + + K NR +  ++ AF K
Sbjct: 1666 REIVRESSPEEPEKHTRLWCHEDVVNVLADYTGTKAIEGLVMKLPKTNR-VCFDTIAFEK 1724

Query: 484  MPKLRFLRF-----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            M +LR L+       GD  KC   HL        R L W   PLK    N   + LV+++
Sbjct: 1725 MIRLRLLQLDNVQVIGDY-KCFPKHL--------RWLSWQGFPLKYTPENFYQKNLVAME 1775

Query: 537  MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTI 593
            +  + + Q+W    + P  +   K      +   K L+R PD  +L NLE L +K   ++
Sbjct: 1776 LKHSNLAQVW----KKPQLIEGLK---ILNLSHSKNLKRTPDFSKLPNLEKLIMKDCQSL 1828

Query: 594  RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---N 650
             E+  S+G L  +  L L + ++L  +P  I  L ++  L +S C ++  L E      +
Sbjct: 1829 LEVHPSIGDLKNLLMLNLKDCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMES 1888

Query: 651  LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            L  L A N T +++ P  +    S+ Y++LC +  L  +    +++  W+  ++
Sbjct: 1889 LTTLMAAN-TGVKQPPFSIVRSKSIGYISLCGYEGLSHHVFPSLIR-SWISPTM 1940


>gi|224060459|ref|XP_002300210.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222847468|gb|EEE85015.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 524

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 215/511 (42%), Positives = 294/511 (57%), Gaps = 59/511 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG++TR+ FT+HL+H L  K I  FI D+L RG++I+  L   IE S I+++I
Sbjct: 1   YDVFLSFRGQETRNTFTAHLYHALCNKGINAFIADKLERGEHITSQLYRVIEDSRISLLI 60

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YA S +                      FY VDPS V +Q+ SFG         + 
Sbjct: 61  FSENYARSIYCLDELVKILECKESKGQVVFPVFYNVDPSDVEEQNGSFGEALLFHETYWG 120

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E++++W+ ALT+AA LSG+  N    E+K I  I   VL +L+ T        VG+ 
Sbjct: 121 IDTERVQKWREALTKAAQLSGWHLNN-GNEAKFIWRIVEKVLSQLNHTSLHIAAYQVGLN 179

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             IEEI  +L   S+GVC + + GIGG+ K TI+ AV+N I+  FEGS F  NVRE  + 
Sbjct: 180 NHIEEINHMLNTRSDGVCMVGLCGIGGVGKTTISKAVYNLIANQFEGSCFLSNVREISKQ 239

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS---------- 261
            G+  LQ+ LL E+  D N+      R I    +RL  KKV IV DD  +          
Sbjct: 240 HGLLRLQETLLYEILGDKNLVLGSVDRGINVIRDRLRNKKVLIVIDDADNLDQLKQLAGE 299

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSRVIITTRD+ +L      + Y++KEL   DA  LF   AF   H    H+E+
Sbjct: 300 PDWFGLGSRVIITTRDEHLLVAHGVERLYKVKELCPDDALMLFSWNAFRNPHPSEDHLEV 359

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + +A++YAQG+PLAL VLG +L GRS   WES + +L+ IP+ +I EVLKIS+D L+  +
Sbjct: 360 SLRAVRYAQGLPLALVVLGAFLYGRSIREWESELDRLKRIPNKQIYEVLKISFDGLEYHE 419

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMG 423
           K +FLDIA F +G+ +D VI I DA         + LI   L Y    +I+MH+LL+ MG
Sbjct: 420 KTIFLDIARFFKGQEKDYVIKILDACDVNPDIGIQVLIEKSLIYIENNKIQMHELLQSMG 479

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           R+IV +ES N PG+R+RLW H+D+  VL +N
Sbjct: 480 RQIVHQESPNIPGRRSRLWFHEDVLHVLTEN 510


>gi|356545124|ref|XP_003540995.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1116

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 257/726 (35%), Positives = 386/726 (53%), Gaps = 96/726 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y+VF+SFRG+DTR+NFT HL   L  K I TF DD +L +G+ I  SL+  IE S I +I
Sbjct: 48  YEVFVSFRGKDTRNNFTDHLFGALQRKGILTFRDDTKLKKGERILSSLMQAIEGSQIFVI 107

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY VDPS VRKQ+  +G+ F++  +RF
Sbjct: 108 VFSKNYASSTWCLRELEKILDCVIVPGKRVLPIFYDVDPSEVRKQTGDYGKAFTKHEERF 167

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++KRW+ ALT+ A+ SG+D  + + +   IE+I  ++L +L   F S    L
Sbjct: 168 KDDVEKMEEVKRWRRALTQVANFSGWDM-MNKSQYDEIEKIVQEILSKLGRNFSSLPNDL 226

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  +EE+E LL +   E V  + I+G+GGI K T+A  ++++IS  ++   F  NV 
Sbjct: 227 VGMESPVEELEKLLLLDPVEDVRIVGIFGMGGIGKTTLASVLYHRISHQYDACCFIDNVS 286

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVT------ 260
           +     G   + K+LL +   + N++  N+ +  N    RL   K  IV D+V       
Sbjct: 287 KVYRDCGPTGVAKQLLHQTLNEENLQICNLHNAANLIQSRLRYVKTLIVLDNVDEVKQQE 346

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSR+II +RD   LK       Y+++ L  AD+ KLFC+ AF  D +  
Sbjct: 347 KLVLNREWLGAGSRIIIISRDMHNLKEYGVTSVYKVQLLNGADSLKLFCKKAFNCDDIVG 406

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            + ELT   +KYA  +PLA+KVLG +LCGRS   W SA+ +L+  P+ +I +VL+ISYD 
Sbjct: 407 GYKELTYDVLKYANSLPLAIKVLGSFLCGRSVSEWRSALVRLKENPNKDILDVLQISYDG 466

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           L + +K +FLDIACF  G     V  + D               KSLI+    + I MHD
Sbjct: 467 LQELEKQIFLDIACFFSGYEELYVKKVLDCCGFHAEIGIRVLLDKSLIDNSHGF-IEMHD 525

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK-VNREIHM 476
           LL+ +GR+IV+  S N P K +RLW  KD Y  + K T T   E I LDM++ +   + +
Sbjct: 526 LLKVLGRKIVKGNSPNEPRKWSRLWLPKDFYD-MSKTTETTNNEAIVLDMSREMGILMTI 584

Query: 477 NSYAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            + A SKM  LR L     +F G+ + C+ + L+         L+W + P   L  +   
Sbjct: 585 EAEALSKMSNLRLLILHDVKFMGNLD-CLSNKLQ--------FLQWFKYPFSNLPSSFQP 635

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           +KLV L +  + +++LW  ++ LP+           ++ D K L ++PD   + NLE++ 
Sbjct: 636 DKLVELILQHSNIKKLWKGIKYLPNLR-------ALDLSDSKNLIKVPDFRGVPNLEWII 688

Query: 588 VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL--QTL 644
           ++G T +  +  S+G L  +  L L N  NL  +P +I  LS L +L IS C ++    L
Sbjct: 689 LEGCTKLAWIHPSVGLLRKLAFLNLKNCKNLVSLPNNILGLSSLEYLNISGCPKIFSNQL 748

Query: 645 PELPCN 650
            E P N
Sbjct: 749 LENPIN 754



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)

Query: 572 MLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
           +L  LP     L  L +    + ++P+++G +  ++ L L  N  +  +P +I  LSKL 
Sbjct: 799 LLPSLP-SFSCLHDLDLSFCNLSQIPDAIGSILSLETLNLGGNKFVS-LPSTINKLSKLV 856

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN-----------L 680
            L + HC++L+ LPE+P    L   R   S      GL   +    V+           L
Sbjct: 857 HLNLEHCKQLRYLPEMPTPTALPVIRGIYSFAHYGRGLIIFNCPKIVDIERCRGMAFSWL 916

Query: 681 CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRP 740
              L++     + I   GW+             +  PGN+IP+WF ++ +G+S +L   P
Sbjct: 917 LQILQVSQESATPI---GWI------------DIIVPGNQIPRWFNNRCVGNSISLDPSP 961

Query: 741 PRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNV 780
                 N  I  A C+VV    F+ +    S ++DW  ++
Sbjct: 962 IMLD--NNWIGIA-CSVV----FVVFDDPTSLDNDWKSSI 994


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 256/725 (35%), Positives = 372/725 (51%), Gaps = 132/725 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR++FT+HL+  L  K I TFIDD +L RGD IS +L+  I+ S  +++
Sbjct: 10  YDVFLSFRGEDTRNSFTAHLYKELRTKGINTFIDDDKLERGDVISSALVAAIQNSKFSLV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           + SE YASS W                      FY VDPSHVR  +  FG   ++  +  
Sbjct: 70  VLSENYASSGWCLEELVKILECMRTMGQRVLPIFYDVDPSHVRXHNGKFGEALAKHEENL 129

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-DATFQSKNKGLVGV 156
           R  E++  W++ALT+ A+LSG+DS   + E  LI+ IA  +  +L   +    ++ LVG+
Sbjct: 130 RTMERVPIWRDALTQVANLSGWDSRN-KHEPMLIKGIATYIWNKLFSRSSNYADQNLVGI 188

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           E SI EI+SLL   S  V  + IWG+GGI K T+A AV+N+IS  FE   F  NV     
Sbjct: 189 ESSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFJENVLIV-- 246

Query: 217 TGGIKDLQK-KLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVL 275
              I D+   K+L +L        I                     GSR+IITTR+KQ+L
Sbjct: 247 ---IDDVNNSKILEDLIGKHGWFGI---------------------GSRIIITTRNKQLL 282

Query: 276 KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGC 335
                N+ Y +++L   +A +LF ++AF   H    ++EL+   + YAQG+PLAL VL  
Sbjct: 283 VTHGVNEVYEVEKLNDDNAVELFSRYAFKKAHPIDDYVELSQCIVVYAQGLPLALXVL-- 340

Query: 336 YLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVI 395
                                                D+++++FLDIACF +G  +  V+
Sbjct: 341 -------------------------------------DNERDIFLDIACFFQGHDKXYVM 363

Query: 396 SIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLW 442
            IF +              KSLI++ +  ++  H+LL+ MGREIVR+ S   PGKR+RLW
Sbjct: 364 EIFRSCGFFPDIGIRVLIEKSLISV-VENKLMXHNLLQKMGREIVREASPKEPGKRSRLW 422

Query: 443 HHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY-------GD 495
            H D+  VL K TGTE +EGISLD++ + +EI+  + AF+ M +LR L+ Y         
Sbjct: 423 IHDDVNHVLTKXTGTEEVEGISLDLSSL-KEINFTNEAFAPMNRLRLLKVYTLNFLMDSK 481

Query: 496 KNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR 551
           + KC V    G  F   E+RHL W + PLK+L  +   + LV L MP ++++QLW   + 
Sbjct: 482 REKCKVHFSXGFKFHCEELRHLYWYEYPLKSLPNDFNLKNLVDLSMPYSQIKQLWKGTKV 541

Query: 552 LPSSLCTFKTPITF-EIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVK 607
           L +        + F  +   K L   PD   + NLE L +KG  ++ ++  SLG L  + 
Sbjct: 542 LXN--------LKFMNLKHSKFLTETPDFSRVTNLERLVLKGCISLYKVHPSLGDLXKLN 593

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS--ARNCTSLEKL 665
            L L N   L+ +P  I  L  L    +S C + + LPE   NL +L     + T++  L
Sbjct: 594 FLSLKNCKMLKSLPSCICDLKCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVL 653

Query: 666 PAGLS 670
           P+  S
Sbjct: 654 PSSFS 658



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 45/278 (16%)

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
           +SLG LS ++ L LS N N   +P +I  L  L  L + +C+RLQ LPELP ++  + AR
Sbjct: 720 DSLGFLSSLEDLDLSEN-NFVTLPSNIXRLPHLKMLGLENCKRLQALPELPTSIRSIMAR 778

Query: 658 NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
           NCTSLE +     S SS+L       ++L  +    I +DG +  +L        S    
Sbjct: 779 NCTSLETISN--QSFSSLLMT-----VRLKEHIYCPINRDGLLVPAL--------SAVXF 823

Query: 718 GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWD 777
           G+ IP W R+QS GS    +  PP     N  +  A C V V P  +          D+ 
Sbjct: 824 GSRIPDWIRYQSSGSEVKAEL-PPNWFDSN-FLGLALCVVTV-PRLVSL-------ADFF 873

Query: 778 GNVYAVCCDWKRKSEG-----HLYSWFLGKISYVESDHVFLGCNSFGGEYFGP-----NY 827
           G  +  C  +   S        +Y++       VESDH++L         + P     N+
Sbjct: 874 GLFWRSCTLFYSTSSHXSSSFDVYTYPNHLKGKVESDHLWL--------VYVPLPHFINW 925

Query: 828 DEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADH 865
            + +  I  SF    ++    +K+CGI  VY  +  ++
Sbjct: 926 QQVT-HIKASFRITTFMRLNVIKECGIGLVYVNEELNY 962


>gi|357513231|ref|XP_003626904.1| TMV resistance protein N [Medicago truncatula]
 gi|355520926|gb|AET01380.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 251/786 (31%), Positives = 394/786 (50%), Gaps = 107/786 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGED   +F SHL + L    I T+ID  QL  G  +   LL  IE S I+II
Sbjct: 36  YDVFISFRGEDIGKSFVSHLVNALRKARITTYIDGGQLHTGTELGPGLLAAIETSSISII 95

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ Y  S W                      F+ VDPS VR Q  +FG+      KR 
Sbjct: 96  VFSKNYTESSWCLDVLQNVMECHISDGQLVVPVFHDVDPSVVRHQKGAFGQVLRDTAKRT 155

Query: 100 PEK------MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
             K      +  WKNAL EA  + G+++   R E +L+E I  DVL++L+    S  K  
Sbjct: 156 SRKGEIEDVVSSWKNALAEAVSIPGWNAISFRNEDELVELIVEDVLRKLNKRLLSITKFP 215

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+E  ++++   +   S  VC   IWG+GG  K T A A+FN+I+  F  + F  N+RE
Sbjct: 216 VGLESRVQQVIQFIQNQSSKVCLTGIWGMGGSGKTTTAKAIFNQINLKFMHASFIENIRE 275

Query: 214 A--EETGGIKDLQKKLLSELSK-DGNMRNI-ESQL---NRLARKKVRIVFDDVTS----- 261
              +   GI  LQ++LLS++ K +  + NI E Q+    R   K V +V DDVT+     
Sbjct: 276 VCIKNDRGIIHLQQQLLSDVMKTNEKVYNIAEGQMMINERFRGKNVFVVLDDVTTFEQLK 335

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS +IITTRD  +L     +   +MKE+   ++ +LF    F   +   
Sbjct: 336 ALCANPEFFGPGSVLIITTRDVHLLDLFKVDYVCKMKEMDENESLELFSWHVFRQPNPRE 395

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              E + + + Y  G+PLAL+V+G Y    + E W S     + IP+ +I+E L+ISYD 
Sbjct: 396 DFSEFSKRVVSYCGGLPLALEVIGSYSNQMTDEDWISVFSNPKTIPNHQIQEKLRISYDG 455

Query: 371 LD-DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
           L+ D +K++FLDI CF  G+ R  V  I +               +SL+ +D + ++ MH
Sbjct: 456 LNQDMEKDIFLDICCFFIGKDRTYVTEILNGCGLDADTGITVLVERSLLKVDNYNKLEMH 515

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL+RDMGREIVR+ S   PGKR+RLW H+D++ +L  N+GTE +EG+ L   +  R +  
Sbjct: 516 DLIRDMGREIVRESSAKEPGKRSRLWFHEDVHDILTTNSGTETVEGLVLKSQRTGR-VCF 574

Query: 477 NSYAFSKMPKLRFLRF--------YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
           ++ +F KM +LR L+         YG+ +K            E+R + W       +  +
Sbjct: 575 STNSFKKMNQLRLLQLDCVDLTGDYGNLSK------------ELRWVHWQGFTFNCIPDD 622

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELE 581
                LV  ++  + ++Q+W+  + L          +  +I++    + L   PD  +L 
Sbjct: 623 FHQGNLVVFELKHSNIKQVWNKTKLL----------VNLKILNLSHSRYLTSSPDFSKLP 672

Query: 582 NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           NLE L +K   ++ E+  S+G L+ +  L L +   L  +P+SI  L  L  L +S C +
Sbjct: 673 NLEKLIMKDCPSLSEVHPSIGDLNKLLMLNLKDCIGLSNLPKSIYQLKSLNTLILSGCSK 732

Query: 641 LQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG 698
           +  L E    +  L+    N T+++++P  +    S+ Y++LC +  L  +    +++  
Sbjct: 733 IDKLEEDIVQMESLTTLIANNTAVKEVPFSIVRSKSIRYISLCGYEGLSHDVFQSLIR-S 791

Query: 699 WMKHSL 704
           WM  +L
Sbjct: 792 WMSPTL 797


>gi|121544146|gb|ABM55687.1| TIR-NBS-LRR class disease resistance protein [(Populus tomentosa x
           P. bolleana) x P. tomentosa]
          Length = 678

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 226/614 (36%), Positives = 338/614 (55%), Gaps = 80/614 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS  LL  IE S I+I+
Sbjct: 52  YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISHHLLRAIEESRISIV 111

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       F+ +DPS VRKQ+ SF   F +  +R
Sbjct: 112 VFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFFDIDPSDVRKQTASFAEAFVKHEER 171

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
             EK+ + W+ AL EA +LSG++ N +    E+K I+EI NDV  +L   + S  + LVG
Sbjct: 172 SQEKLVQEWRKALKEAGNLSGWNLNDMANGHEAKFIKEIINDVFNKLSREYLSVPEHLVG 231

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++ +  +I   L   ++ VC   I G+ GI K TIA  VFN++   FEGS F  N+ E +
Sbjct: 232 MDLA-HDILDFLSTATDDVCIAGIHGMPGIGKTTIAKVVFNQLYYRFEGSCFLSNINETS 290

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++ K    N+  ++        R+ RK+V +V DDV         
Sbjct: 291 KQFNGLALLQKQLLHDILKQDVANINCVDRGKVLIKERIRRKRVLVVADDVAHPEQLNAL 350

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  VL    A++ Y+++EL   ++ +LF   A         +
Sbjct: 351 MGERSWLGRGSRVIITTRDSSVLLK--ADQTYQIEELKPYESLQLFRWHALRDTKPTEDY 408

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL+  A+ Y  G+PLAL+V+G  L G++++ W+  + KL  IPH +I+  L+ S+D+LD
Sbjct: 409 MELSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPHHDIQGKLRTSFDALD 468

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ V  +  A               +SLI ++ F +I MHD
Sbjct: 469 GEELRNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVNCFGKITMHD 528

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L RDMGRE+VR+ S   PGKR R+W+ +D + VL++  GT+ +EG++LD+ + +    ++
Sbjct: 529 LFRDMGREVVRESSPKEPGKRTRIWNQEDAWNVLQQQKGTDVVEGLTLDV-RASEAKSLS 587

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + +F+KM  L  L+  G        HL G   +   E+  + W QCPLK L  +   + L
Sbjct: 588 ARSFAKMKCLNLLQING-------VHLTGSFKLLSKELMWICWLQCPLKYLPSDFILDNL 640

Query: 533 VSLKMPCTKVEQLW 546
           V L    + +++LW
Sbjct: 641 VVLDTQYSNLKELW 654


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 261/792 (32%), Positives = 410/792 (51%), Gaps = 118/792 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           M+DVFLSFRG++TR+NF+SHL+  L  + I  ++DD +L RG  I  +L   IE S I++
Sbjct: 21  MHDVFLSFRGKETRNNFSSHLYSNLKQRGIDVYMDDRELERGKAIEPALWKAIEESRISV 80

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +IFS  YASS W                      FY VDPS V ++   + + F    + 
Sbjct: 81  VIFSRDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSDVAERKRKYEKAFVEHEQN 140

Query: 99  FPEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F E M++   WK+ L+  A+LSG+D    R ES+ I  IA  +  +L  T  + +K LVG
Sbjct: 141 FKENMEKVRNWKDCLSTVANLSGWDVRH-RNESESIRIIAEYISYKLSVTLPTISKKLVG 199

Query: 156 VECSIEEIESLLC--IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           ++  +E +   +   +G E    +    +GGI K T+A  ++++I   FEGS F  N+RE
Sbjct: 200 IDSRLEVLNGYIGEEVGKEIFIGICG--MGGIGKTTVARVLYDRIRWQFEGSCFLENIRE 257

Query: 214 A-EETGGIKDLQKKLLSELSKD-----GNMRNIE-------------SQLNRLARKKVRI 254
              +  G + LQ++LLSE+  +      + R IE                +   +++++ 
Sbjct: 258 DFAKKDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRRLRLKKILLLLDDVDDKEQLKF 317

Query: 255 VFDD---VTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           + ++      GSR+IIT+RDKQVL     ++ Y  ++L   DA  LF Q AF  D     
Sbjct: 318 LAEEPGWFGPGSRIIITSRDKQVLTRNGVDRIYEAEKLNDDDALTLFSQKAFKNDQPAED 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +EL+ + + YA G+PLAL+V+G ++ GRS   W SA+ ++  I   EI +VL+IS+D L
Sbjct: 378 FVELSKQVVGYANGLPLALEVIGSFMHGRSILEWRSAINRIYDILDREIIDVLRISFDGL 437

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
            + +K +FLDIACFL+G  +D +I I D+              KSLI++    R+ MH+L
Sbjct: 438 HELEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSR-DRVWMHNL 496

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+ MG+EIVR E    PGKR+RLW +KD++  L  NTG E IE I LDM  + +E   N 
Sbjct: 497 LQIMGKEIVRCEDPKEPGKRSRLWTYKDVFLALMDNTGKEKIEAIFLDMPGI-KEAQWNM 555

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AFSKM +LR L+     +   +S        E+R +EW   P K+L   +  ++LV L 
Sbjct: 556 KAFSKMSRLRLLKI----DNVQLSEGPEDLSNELRFIEWHSYPSKSLPSGLQVDELVELH 611

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLTVKG- 590
           M  + +EQLW          C  K+ +  +II+      L + PD   + NLE L ++G 
Sbjct: 612 MANSSLEQLW----------CGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGC 661

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           T++ E+  SL     ++ + L N  ++  +P ++  +  L    +  C +L+  P++  N
Sbjct: 662 TSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNL-EMESLNVFTLDGCSKLEKFPDIVGN 720

Query: 651 --------------------------LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CN 682
                                     LGLLS  +C +LE +P+ +  + S+  ++L  C+
Sbjct: 721 MNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 780

Query: 683 FLKLDPNELSEI 694
            LK  P +L E+
Sbjct: 781 ELKYIPEKLGEV 792


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 263/792 (33%), Positives = 407/792 (51%), Gaps = 108/792 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEAS--CIA 58
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S  C+ 
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRWCLN 79

Query: 59  IIIF-----SERYASSRWFFYRVDPSHVRKQSHSFGR----HFSRLRKRFPEKMKRWKNA 109
            ++      S++ +     FY VDPS VR Q  SFG     H     +   E +++W+ A
Sbjct: 80  ELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGDALAYHERDANQEKKEMIQKWRIA 139

Query: 110 LTEAADLSGFDSN-VIRPES-------KLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           L +AA+LSG   N  ++ ES       ++++EI + +++RL+    S  K +VG+   +E
Sbjct: 140 LRKAANLSGCHVNDQLKTESLQHWYETEVVKEIVDTIIRRLNHQPLSVGKNIVGIGVHLE 199

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIK 221
           +++SL+      V  + I+GIGG+ K TIA A++N+IS  ++GS F +N++E  + G I 
Sbjct: 200 KLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKERSK-GDIL 258

Query: 222 DLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT--------------- 260
            LQ++LL  + +  N +  N++  ++ + R     +V ++FDDV                
Sbjct: 259 QLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWF 318

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
            + S +IIT+RDK VL    A+ +Y + +L   +A +LF  WAF  +     +  L+   
Sbjct: 319 RAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNI 378

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           I YA G+PLALKVLG  L G+    WESA+ KL+I+PH+EI  VL+IS+D LDD  K +F
Sbjct: 379 IDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGIF 438

Query: 380 LDIACFLEGEHRDEVISIFD--ASKSLINLDLFYRIR-------MHDLLRDMGREIVRKE 430
           LD+ACF +G+ RD V  I    A  ++  LD    I        MHDL++ MG EI+R+E
Sbjct: 439 LDVACFFKGDDRDFVSRILGPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQE 498

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
               PG+R+RL    + Y VL  N GT AIEG+ LD  K N    + + +F +M +LR L
Sbjct: 499 CPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCKFNPS-ELTTESFKEMNRLRLL 556

Query: 491 RFYGDKNKCMVSHLEGVPFA----EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
           + +  + K  +       F     E+ +L W   PL++L  N  A+ LV L +  + ++Q
Sbjct: 557 KIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLRDSNIKQ 616

Query: 545 LWD----------------------------------------DVQRLPSSLCTFKTPIT 564
           +W                                         +++ LP  +  +K   T
Sbjct: 617 VWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTLEGCVNLELLPRGIYKWKHLQT 676

Query: 565 FEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIP 621
                C  LER P+   ++  L  L + GT I +LP S+  L+ ++ L+L     L +IP
Sbjct: 677 LSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIP 736

Query: 622 ESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCTS--LEKLPAGLSSMSSVLYV 678
             I HLS L  L + HC  ++  +P   C+L  L   N        +P  ++ +S +  +
Sbjct: 737 NHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVL 796

Query: 679 NL--CNFLKLDP 688
           NL  CN L+  P
Sbjct: 797 NLSHCNNLEQIP 808



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 142/352 (40%), Gaps = 85/352 (24%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTV-------------------- 588
            LP S+C   +  T  +  C    +LPD L   ++LEYL V                    
Sbjct: 1191 LPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLR 1250

Query: 589  ----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                +G  +RE P  +  LS +  L L  N +  RIP+ I  L  L  L++ HC+ LQ +
Sbjct: 1251 TLKLQGCNLREFPSEIYYLSSLVTLSLGGN-HFSRIPDGISQLYNLENLYLGHCKMLQHI 1309

Query: 645  PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            PELP  L  L A +CTSLE     LSS S++L+ +L    K                 S 
Sbjct: 1310 PELPSGLFCLDAHHCTSLE----NLSSRSNLLWSSLFKCFK-----------------SQ 1348

Query: 705  YEERGIKKSMYF---PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP 761
             + R  +K++       N IP+W  HQ  G   T+K  P      +  + F  C++ V P
Sbjct: 1349 IQGREFRKTLITFIAESNGIPEWISHQKSGFKITMKL-PWSWYENDDFLGFVLCSLCV-P 1406

Query: 762  AFLKYFRHK------SGEDDWDGNVYA------VCCDWKRKSEGHLYSWFLGKISYVESD 809
              ++  +H+      + +DD     Y        C D    S+G L  +   +I      
Sbjct: 1407 LEIETKKHRCFNCKLNFDDDSAYFSYQSFQFCEFCYDEDASSQGCLIYYPKSRIPKRYHS 1466

Query: 810  HVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            + +   N+F   YFG                   ++  +V +CG HF+YA D
Sbjct: 1467 NEWRTLNAFFNVYFG-------------------VKPVKVARCGFHFLYAHD 1499


>gi|27764544|gb|AAO23074.1| R 10 protein [Glycine max]
          Length = 901

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 264/723 (36%), Positives = 371/723 (51%), Gaps = 93/723 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFL+FRG DTR  FT +L+  L  K I TF D++ L RG+ I+ +LL  I+ S IAI
Sbjct: 11  IYDVFLNFRGGDTRYGFTGNLYRALCDKGIHTFFDEKKLHRGEEITPALLKAIQESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     FY VDPS VR Q  S+G   ++ +KRF
Sbjct: 71  TVLSKNYASSSFCLDELVTILHCKSEGLLVIPVFYNVDPSDVRHQKGSYGVEMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADL G+   D +    E K I+ I   V + ++          
Sbjct: 131 KAKKEKLQKWRIALKQVADLCGYHFKDGDAY--EYKFIQSIVEQVSREINRAPLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS  V  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 189 VGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS----- 261
           E     G+K LQ  LLS+L  + ++     Q       +RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKREQLK 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L  + A +L    AF  + +D 
Sbjct: 309 AIVGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLKWNAFKREKIDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+PLAL+V+G  L G++   WESAM   + IP  EI E+LK+S+D+
Sbjct: 369 SYEDVLNRVVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY--RIR 414
           L + QKNVFLDIAC   G    EV  I  A               KSLI L+ +    + 
Sbjct: 429 LGEEQKNVFLDIACCFRGYKWTEVDDILRALYGNCKKHHIGVLVEKSLIKLNCYGTDTVE 488

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DM REI RK S   PGK  RLW  KDI QV K NTGT  IE I LD +  ++E 
Sbjct: 489 MHDLIQDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNTGTSKIEIICLDSSISDKEE 548

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            +  N  AF KM  L+ L    DK +K      EG     +R LEW + P   L  N   
Sbjct: 549 TVEWNENAFMKMENLKILIIRNDKFSKGPNYFPEG-----LRVLEWHRYPSNCLPSNFHP 603

Query: 530 EKLVSLKMP--CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEY 585
             LV  K+P  C    +        PS    F      +  +CK L ++PD  +L NL  
Sbjct: 604 NNLVICKLPDSCMTSFEFHG-----PSK---FGHLTVLKFDNCKFLTQIPDVSDLPNLRE 655

Query: 586 LTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L+ +   ++  + +S+G L+ +K+L     S L+  P    +L+ L  L +S C  L+  
Sbjct: 656 LSFEECESLVAVDDSIGFLNKLKKLSAYGCSKLKSFPP--LNLTSLQTLELSQCSSLEYF 713

Query: 645 PEL 647
           PE+
Sbjct: 714 PEI 716



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
           V  L LS N N   +PE  + L  L  L +S CE LQ +  LP NL    ARNC SL   
Sbjct: 825 VGHLNLSGN-NFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDARNCASLT-- 881

Query: 666 PAGLSSMSSVLYVNLCNFLKL 686
               SS  ++L   + +FL L
Sbjct: 882 ----SSSKNMLLNQVLSFLLL 898


>gi|356561383|ref|XP_003548961.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1003

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 260/716 (36%), Positives = 390/716 (54%), Gaps = 82/716 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR NFT HL++ L    I TFIDD+ L RG+ I+ +LL  I+ S IAII
Sbjct: 19  YDVFLSFRGKDTRQNFTGHLYNSLFKNGILTFIDDKGLRRGEEITPALLNAIKNSRIAII 78

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FSE YASS +                       FY VDPS VR Q+ ++    ++  +R
Sbjct: 79  VFSEDYASSTYCLDELVTILESFKEEEGRSIYPIFYYVDPSQVRHQTGTYSDALAKHEER 138

Query: 99  FP---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F    +K+++W+ AL +AA+LSG+  +  +PE K I +I  ++ +++D          +G
Sbjct: 139 FQYDIDKVQQWRQALYQAANLSGWHFHGSQPEYKFILKIVKEISEKIDCVPLHVADKPIG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           +E ++  ++SL  + S+ V  + I+GIGGI K TIA AV+N     FEG  F  ++RE A
Sbjct: 199 LEYAVLAVKSLFGLESD-VSMIGIYGIGGIGKTTIARAVYNMSFSKFEGICFLPDIREKA 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVT-------- 260
               G+ +LQ+ LLSE  K+ +++       I+    RL +KKV ++ DDV         
Sbjct: 258 INKHGLVELQEMLLSETLKEKDIKVGHVNKGIQIIKQRLQQKKVLLILDDVDKLEQLKVL 317

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGS +IITTRDK +L      K Y +K L    + +LF   AF  +  D S+
Sbjct: 318 AGQYDWFGSGSIIIITTRDKHLLATHEVVKLYEVKPLNDEKSLELFDWHAFKNNKTDPSY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           + ++++A+ YA G+PLAL+V+G  L G+S     SA+ K E IPH +I E+ K+SYD L+
Sbjct: 378 VTISNRAVSYACGLPLALEVIGSDLFGKSLNECNSALDKYERIPHEKIHEIFKVSYDGLE 437

Query: 373 DSQKNVFLDIACFLE--------------GEHRDEVISIFDASKSLINLDLFYRIRMHDL 418
           +++K +FLDIACFL               G H ++ + +    KSL+ +D    +RMHDL
Sbjct: 438 ENEKGIFLDIACFLNTFKVSYVTQMLHAHGFHPEDGLRVL-VDKSLVKIDASGFVRMHDL 496

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +RD G EIVR+ES   PG+R+RLW  +DI  VL++NTGT+ IE I L+    N ++  N 
Sbjct: 497 IRDTGIEIVRQESTVEPGRRSRLWFKEDIVHVLEENTGTDKIEFIKLEGYN-NIQVQWNG 555

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF KM  LR L     +N    +  E +P   +R L+W   P  +L  +   +++  LK
Sbjct: 556 KAFQKMKNLRILII---ENTTFSTGPEHLP-NSLRFLDWSCYPSPSLPSDFNPKRVEILK 611

Query: 537 MP--CTKVEQLWDDVQRLPSSLCTFK--TPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           MP  C K+ Q    ++ L  S+  FK    +T     C  L+ L     L +LE L +  
Sbjct: 612 MPESCLKIFQPHKMLESL--SIINFKGCKLLTLSAKGCSKLKILAHCIMLTSLEILDLGD 669

Query: 591 TTIRE-LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
               E  PE L ++  ++ + L +N+ +  +P SI +L  L  L +  C+RL  LP
Sbjct: 670 CLCLEGFPEVLVKMEKIREICL-DNTAIGTLPFSIGNLVGLELLSLEQCKRLIQLP 724


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 281/851 (33%), Positives = 411/851 (48%), Gaps = 165/851 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVL-SLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +DVFLSFRGEDTR  FT HL+  L   K I+TF D++ L RG+ I  SLL  IE S + I
Sbjct: 16  WDVFLSFRGEDTRFTFTDHLYSALCQQKGIRTFRDNEGLHRGEEIGSSLLKAIEESRMCI 75

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++FS+ YA S+W                      FY VDP  VR Q+ SFG  F + +K 
Sbjct: 76  VVFSKTYAHSKWCLDELAKIMECKTQKGQIVVPVFYHVDPCDVRNQTRSFGEAFDKYQKV 135

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +K+ RWK ALTEAA+LSG+       ES+ I+ I  D+L R        +K L+G+E 
Sbjct: 136 PEDKVMRWKAALTEAANLSGYHVQDGY-ESQAIQRIVQDILSRNLKLLHVGDK-LIGMER 193

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++E+ SL+ I S  V  + I GI GI K T+A  V+N I   F+G+ F LN+   + + 
Sbjct: 194 RLKEMASLIHIDSNDVRMIGISGIDGIGKTTLAKVVYNTIVHQFDGASFLLNISSQQLSL 253

Query: 219 GI------KDLQKKLLSELSKDGNMRNIESQLNRL-ARKKVRIVFDDVTS---------- 261
                   +D+  + +  +S +        ++ R+   KKV +VFDDV +          
Sbjct: 254 LQLQKQLLRDILGEDIPTISDNSEG---SYEIRRMFMSKKVLVVFDDVNTYFQLESLIQN 310

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+T+ +K +L     +  Y  KEL   +A +LF   AF  +      I L
Sbjct: 311 RSTFGPGSRIIVTSGNKNLLAGLGGDAFYEAKELNCKEATQLFSLHAFHMNSPQKGFIGL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +   + Y +G+P+AL+VLG  L G+ K  W+S +++LE  P+++I+ VL   + +LDDS 
Sbjct: 371 SRCIVDYCKGLPIALEVLGSLLFGKKKFEWKSVLQRLEKRPNMQIQNVLMRCFQTLDDSM 430

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS---------KSLINLDLFYRIRMHDLLRDMGREI 426
           K+VFLD+ACF +GE  D V  I +           +SLI++    ++ MHDL++    EI
Sbjct: 431 KDVFLDVACFFKGEDLDFVERILEYGRLGTRVLNDRSLISI-FDKKLLMHDLMQKACWEI 489

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           VR++  N PGK +RLW  +D++ VL KNTGTE IEGI L+M+  N E+H+ S AF KM +
Sbjct: 490 VRQQDHNEPGKWSRLWDPEDVHHVLTKNTGTERIEGIFLNMSLSN-EMHLTSDAFKKMTR 548

Query: 487 LRFLRFYGD-KNKCMVS---HLE---GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           LR LR Y + +N  +VS   HL      P  E+R+L W    L++L  N   EKL  L +
Sbjct: 549 LRLLRVYQNAENNSIVSNTVHLPRDFKFPSHELRYLHWDGWTLESLPSNFDGEKLGELSL 608

Query: 538 PCTKVEQLWDDVQRLPS----------------------------------------SLC 557
             + ++ LW   +RLP                                         S+ 
Sbjct: 609 RHSSLKYLWKRRKRLPKLVVIDLGNSQHLLECPNLSFAPRVERLILDGCTSLPEVHPSVT 668

Query: 558 TFKTPITFEIIDCKMLERLPDE--------------------------LENLEYLTVKGT 591
             K      + +CKML   P                            +ENL  L ++GT
Sbjct: 669 KLKRLTILNVKNCKMLHYFPSITGLESLEVLNLSGCSKIDKFPEIQGCMENLLELNLEGT 728

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----L 647
            I ELP S+  L  +  L + N  NL  +P +I  L  L  L +S C  L+  PE    +
Sbjct: 729 AIVELPPSVVFLPRLVLLDMKNCKNLMILPSNIYSLKSLGTLVLSGCSGLEIFPEIMEDM 788

Query: 648 PC----------------------NLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNF 683
            C                       L LL+ R C +L  LP  + S+ S+  L V+ C+ 
Sbjct: 789 ECLQELLLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLETLIVSGCSK 848

Query: 684 LKLDPNELSEI 694
           L   P +L  +
Sbjct: 849 LSKLPEDLGRL 859



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 51/294 (17%)

Query: 580  LENLEYLTVKGT--TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +L+YL + G   T R + ++LG L +++ L LS N NL  +PE +  LS L  + ++ 
Sbjct: 928  LYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRN-NLVTVPEEVNRLSHLRVISVNQ 986

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKL-------PAGLSSMSSVLYVN--LCNFLKLDP 688
            C+ LQ + +LP ++ LL A +C SLE L       P  LSS S +  V   L N   L  
Sbjct: 987  CKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQSPQFLSSSSCLRLVTFKLPNCFALAQ 1046

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
            + ++ I++   +  +   E  I+ S+  PG+ IP+WF+H S+GSS T++     P  +NK
Sbjct: 1047 DNVATILEK--LHQNFLPE--IEYSIVLPGSTIPEWFQHPSIGSSVTIEL---PPNWHNK 1099

Query: 749  -LISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE 807
              + FA C+  VF            E +W   +                           
Sbjct: 1100 DFLGFALCS--VFSLEEDEIIQGPAETEWLRLI--------------------------- 1130

Query: 808  SDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             DH++L     G +   P     +     + +F        VK CGIH +YA+D
Sbjct: 1131 -DHIWL-VYQPGAKLMIPKSSSPNKSRKITAYFSLSGASHVVKNCGIHLIYARD 1182


>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 253/785 (32%), Positives = 398/785 (50%), Gaps = 114/785 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ--LIRGDNISQSLLGTIEASCIAI 59
           +DVFLSFRG DTR NFT HL+  L  + I TF DD   + RG+ I+  LL  +E S   I
Sbjct: 36  HDVFLSFRGADTRYNFTDHLYTALVQRGINTFKDDDNLIRRGEEIAPKLLKAVEESRSCI 95

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ S+ YA SRW                      FY VDPS VR QS SFG+ F+   + 
Sbjct: 96  VVLSKTYADSRWCLDELATIMERRREFGQLVFPIFYHVDPSDVRNQSGSFGKAFANYEEN 155

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           + +K++RW+ ALTE A+LSG+  ++++  ESKLI+EI + ++KRL+       + +VG++
Sbjct: 156 WKDKVERWRAALTEVANLSGW--HLLQGYESKLIKEIIDHIVKRLNPKLLPVEEQIVGMD 213

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++E++SLL +  + +  + I+G  GI K T+A  V+N I   F G  F  +V+     
Sbjct: 214 FRLKELKSLLNVHLDDIRMVGIYGPSGIGKTTMAKMVYNDILCQFNGGIFLEDVKSRSRF 273

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVF------DDVTS------ 261
             ++DL + +L  + ++  + NI   +N    RL  KKV +V       + V S      
Sbjct: 274 QLLQDLLRGIL--VGENVELNNINDGINKIKGRLGSKKVFVVIDDVDDSEQVKSLVKSCK 331

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+I+TTR K +L     ++ Y  K L   DA +LF   AF  +     ++++++
Sbjct: 332 WFGLGSRIILTTRYKHLLDVYGVDESYEAKVLCNEDAIQLFSWHAFKQNTPKEDYVDMSN 391

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             + Y QG+PLA+KVLG +L G + + W+S + KL      EI  VLKI YD LDD++K 
Sbjct: 392 LMVNYVQGLPLAIKVLGSFLYGMTIDEWKSTLGKL-TKEDQEIYNVLKICYDGLDDNEKE 450

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           + LDIACF +GE +D V+ I  +              + LI++    RI MHDL++ MG 
Sbjct: 451 ILLDIACFFKGEDKDFVLRILKSCDFYAEIGVRVLCDRCLISIS-NNRISMHDLIQQMGW 509

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
            +VR++S   P K +RLW   +I        G++ IE IS D+++ ++EI  N+  F+KM
Sbjct: 510 TVVREKSPEDPSKWSRLWDPDNIRHAFLGEKGSKNIEVISCDLSR-SKEIQCNTKVFTKM 568

Query: 485 PKLRFLRFYGDKN--KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
            +LR L+ +   +  K ++      P  E+R+L W   PLKTL  N   E LV L +  +
Sbjct: 569 KRLRLLKLHWSDHCGKVVLPPNFEFPSQELRYLHWEGYPLKTLPSNFHGENLVELHLRKS 628

Query: 541 KVEQLWD----------------------------------------DVQRLPSSLCTFK 560
            ++QLW                                          +++L SS+   K
Sbjct: 629 TIKQLWKRSKGLEKLKVIDLSYSKVLTKMPKFSRMPKLEILNLEGCISLRKLHSSIGDVK 688

Query: 561 TPITFEIIDCKMLERLPDEL--ENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNL 617
                 +  C+ L+ LP  +  E+LE L + G       PE    +  +K L L   S +
Sbjct: 689 MLTYLNLGGCEKLQSLPSSMKFESLEVLHLNGCRNFTNFPEVHENMKHLKELYL-QKSAI 747

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSV 675
           E +P SI  L+ L  L +S C   +  PE+  N+  L     N T +++LP+ +  ++S+
Sbjct: 748 EELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIKELPSSIGDLTSL 807

Query: 676 LYVNL 680
             +BL
Sbjct: 808 EILBL 812



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 9/158 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRLS 604
            +++ LPSS+C  K+     +  C  LE  P+ LE++E+L    ++GT I  LP S+  L 
Sbjct: 981  NLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAITGLPSSIEHLR 1040

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
             ++ L L N  NLE +P SI +L+ LT L + +C +L  LP+    L C L  L    C 
Sbjct: 1041 SLQWLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHNLPDNLRSLQCCLTTLDLGGCN 1100

Query: 661  SLE-KLPAGLSSMSSVLYVNLC-NFLKLDPNELSEIVK 696
             +E  +P  +  +SS+ ++++  N ++  P  + +++K
Sbjct: 1101 LMEGGIPRDIWGLSSLEFLDVSENHIRCIPIGIIQLLK 1138



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 18/258 (6%)

Query: 451  LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK-LRFLRFYGDKNKCMVSHLEGVP- 508
            L + +  E   GI  +M K  RE+H+N     ++P  +  L      N    S  E  P 
Sbjct: 812  LSECSNFEKFPGIHGNM-KFLRELHLNGTRIKELPSSIGSLTSLEILNLSKCSKFEKFPD 870

Query: 509  -FAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDD---VQRLPSSLCTFKTPIT 564
             FA + HL      L   N   ++L S       +++L  D   ++ LP S+ + +   T
Sbjct: 871  IFANMEHLR----KLYLSNSGIKELPSNIGNLKHLKELSLDKTFIKELPKSIWSLEALQT 926

Query: 565  FEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIP 621
              +  C   E+ P+   N+  L    ++ T I ELP S+G L+ +  L L N  NL  +P
Sbjct: 927  LSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTRLNSLNLENCKNLRSLP 986

Query: 622  ESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVN 679
             SI  L  L  L ++ C  L+  PE+  ++  L +     T++  LP+ +  + S+ ++ 
Sbjct: 987  SSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAITGLPSSIEHLRSLQWLK 1046

Query: 680  LCNFLKLD--PNELSEIV 695
            L N   L+  PN +  + 
Sbjct: 1047 LINCYNLEALPNSIGNLT 1064



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 11/144 (7%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTIRE--LPESLG 601
            +++ LP+S+       T  + +C  L  LPD L +L+     L + G  + E  +P  + 
Sbjct: 1052 NLEALPNSIGNLTCLTTLVVRNCSKLHNLPDNLRSLQCCLTTLDLGGCNLMEGGIPRDIW 1111

Query: 602  RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
             LS ++ L +S N ++  IP  I  L KLT L ++HC  L+ +P+LP +L  + A  C  
Sbjct: 1112 GLSSLEFLDVSEN-HIRCIPIGIIQLLKLTTLRMNHCLMLEDIPDLPSSLRRIEAHGCRC 1170

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLK 685
            LE     LSS   VL+ +L N  K
Sbjct: 1171 LET----LSSPIHVLWSSLLNCFK 1190



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 81/331 (24%)

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEG 506
           I Q+ K++ G E ++ I L  +KV  ++      FS+MPKL  L   G    C+      
Sbjct: 630 IKQLWKRSKGLEKLKVIDLSYSKVLTKMP----KFSRMPKLEILNLEG----CISLRKLH 681

Query: 507 VPFAEVRHLEWPQCPLKTLNICA-EKLVSL--KMPCTKVEQLW----------------- 546
               +V+ L +       LN+   EKL SL   M    +E L                  
Sbjct: 682 SSIGDVKMLTY-------LNLGGCEKLQSLPSSMKFESLEVLHLNGCRNFTNFPEVHENM 734

Query: 547 ----------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTI 593
                       ++ LPSS+ +  +    ++ +C   ++ P+   N+++L    + GT I
Sbjct: 735 KHLKELYLQKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGI 794

Query: 594 RELPESLGRLSWVKRLILSNNSNLER-----------------------IPESIRHLSKL 630
           +ELP S+G L+ ++ L LS  SN E+                       +P SI  L+ L
Sbjct: 795 KELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSL 854

Query: 631 TFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
             L +S C + +  P++  N+  L     + + +++LP+ + ++  +        L LD 
Sbjct: 855 EILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHL------KELSLDK 908

Query: 689 NELSEIVKDGWMKHSL--YEERGIKKSMYFP 717
             + E+ K  W   +L     RG      FP
Sbjct: 909 TFIKELPKSIWSLEALQTLSLRGCSNFEKFP 939


>gi|124361170|gb|ABN09142.1| TIR [Medicago truncatula]
          Length = 1054

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 249/783 (31%), Positives = 398/783 (50%), Gaps = 94/783 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR    SHL+  L    I TF+DD+ L +G+ +   L   I+ S I I 
Sbjct: 10  YDVFINFRGEDTRRTIVSHLYTALCNAGINTFLDDKKLAKGEELGPELYTAIKMSHIFIA 69

Query: 61  IFSERYASSRW-------------------------FFYRVDPSHVRKQSHSFGRHFS-R 94
           +FS  YA S W                          FY VDPS VRK    FG+     
Sbjct: 70  VFSPNYAQSSWCLNELAHIMELRHRRHSYSPRVVIPLFYHVDPSDVRKLKGDFGKGLKVS 129

Query: 95  LRKRFPEK--------MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATF 146
             K F +         M +W+ AL E  +L G+D+N  R E  L++++  D+L +LD + 
Sbjct: 130 ADKIFSQSGAEREEVLMSKWRRALAEVTNLVGWDANNFRNEGDLVQKLVEDILTKLDMSV 189

Query: 147 QSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-S 205
            S  +  VG+E  ++ I  +L   S   C + +WG+GG  K T+A A++N+I R F+G +
Sbjct: 190 LSITEFPVGLEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKT 249

Query: 206 YFALNVREAEETG--GIKDLQKKLLSELSKDGN-MRNIESQLN----RLARKKVRIVFDD 258
            F  ++RE  +    GI  LQ++LLS+L K  + + +I   +N    RL  +KV IV DD
Sbjct: 250 SFIESIREVCDYNRKGIIHLQEQLLSDLLKTKDKIHSIAVGINKIEKRLQGQKVLIVLDD 309

Query: 259 VT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA 302
           VT                SGS +IITTRD+  L +  A + + M E+   ++ +LF   A
Sbjct: 310 VTKSEQLKALGGNPKLFGSGSVLIITTRDRSHLDSLSA-RVFTMIEMDKNESLELFSWHA 368

Query: 303 FGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEE 362
           F          +L+   + Y +G+PLAL+VLG YL  R+++ W SA+ KL  IP+ E+ +
Sbjct: 369 FRQSCPRKDFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEVLQ 428

Query: 363 VLKISYDSLDD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLD 408
           +L+ISYD L+D ++K++FLDI CF  G++R +V  I +               +SLI +D
Sbjct: 429 ILRISYDGLEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVD 488

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
              + +MHDLLRDMGR IV + S   P K +RLW H+D+  VL K TGT+ +EG+ L   
Sbjct: 489 KNNKFQMHDLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLILKWQ 548

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
           +  R I   + AF +M KLR L+  G     ++    G+   ++R ++W +     +  +
Sbjct: 549 RTGR-ICFGTNAFQEMEKLRLLKLDGVD---LIGDY-GLISKQLRWVDWQRSTFTFIPND 603

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE 584
                LV  ++  + V+Q+W D + L        +         K L+  PD  +L NLE
Sbjct: 604 FDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLS-------HSKYLKSSPDFSKLPNLE 656

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            L +K   ++  +  S+G L  +  + L +   LE +P  I  L  +  L ++ C  +  
Sbjct: 657 KLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDK 716

Query: 644 LPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
           L E    +  L++     TS++++P  +  + S++Y+++C +  L       +++  WM 
Sbjct: 717 LEEDIVQMESLTSLITTGTSIKEVPYSILRLRSIVYISICGYEGLSHEVFPSLIR-FWMS 775

Query: 702 HSL 704
            ++
Sbjct: 776 PTI 778


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 280/884 (31%), Positives = 426/884 (48%), Gaps = 145/884 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT +L+  L    I+TF DB+ L +G  I+  L   I+ S I +I
Sbjct: 19  YDVFLSFRGVDTRKNFTDYLYTTLVRYGIQTFRDBEELEKGGIIASDLSRAIKESRIFMI 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA SRW                      FY VDPS +RKQS  FG   +   +  
Sbjct: 79  IFSKNYAYSRWCLNELVKITECARQEGSMVLPIFYHVDPSDIRKQSGIFGDALAHHERDA 138

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            EK K    +W+ ALTEAA LSG+  +  + E++++ EI N ++  L     + ++ +VG
Sbjct: 139 DEKKKEMIQKWRTALTEAASLSGWHVDD-QFETEVVNEIINTIVGSLKRQPLNVSENIVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++ ++      V  + I G GGI K TIA A++NKIS  ++ S F  N+RE  
Sbjct: 198 ISVHLEKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLRNIREKS 257

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDV---------- 259
           + G    LQ +LL ++ K+   +  NI+  +  + R    K+V ++ DDV          
Sbjct: 258 Q-GDTLQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQLKHLA 316

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDKQVL     +  Y +++    +A +LF  WAF  +    ++ 
Sbjct: 317 ZKKDWFNAKSTIIITSRDKQVLXRYGVDTPYEVQKFDKKEAIELFSLWAFQENLPKEAYE 376

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD
Sbjct: 377 NLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDD 436

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRDMG 423
             K +FLD+ACF +G+ +D V  I              K LI +     + MHDL++ MG
Sbjct: 437 MDKEIFLDVACFFKGKSKDFVSRILGPHAEYGIATLNDKCLITISK-NMMDMHDLIQQMG 495

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EI+R+E  +  G+R+R+W   D Y VL +N GT +I+G+ LD+ K   +    S  F +
Sbjct: 496 KEIIRQECXDDLGRRSRIW-DSDAYDVLTRNMGTRSIKGLFLDICKFPTQFTKES--FKQ 552

Query: 484 MPKLRFLRFYGDKNKCMVS----HLEG-------------VPFAEVRHLEWPQCPLKTL- 525
           M +LR L+ + D     +S    HL+G              P  E+ +  W    L++L 
Sbjct: 553 MDRLRLLKIHKDDEYGCISRFSRHLDGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLP 612

Query: 526 -NICAEKLVSLKMPCTKVEQLW-----------------------DDVQRLPS-SLCTFK 560
            N  A+ LV L +  + ++QLW                        D   +P+  + T K
Sbjct: 613 TNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLK 672

Query: 561 TPITFEII----------------DCKMLERLPD---ELENLEYLTVKGTTIRELP--ES 599
             +  E +                DC  L+R P+    +  L  L + GT I ELP   S
Sbjct: 673 GCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSS 732

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARN 658
            G L  +K L     S L +IP  +  LS L  L +S+C  ++  +P   C L  L   N
Sbjct: 733 FGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLXELN 792

Query: 659 CTS--LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF 716
             S     +PA ++ +S +  ++L      D N+ S+   D     S Y   GI   +  
Sbjct: 793 LKSNDFRSIPATINRLSRLQTLDLHGAFVQDLNQCSQNCND-----SAYHGNGI--CIVL 845

Query: 717 PGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
           PG+  +P+W   +           P      N+ + FA C V V
Sbjct: 846 PGHSGVPEWMMXRRX------IELPQNWHQDNEFLGFAICCVYV 883



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 75/285 (26%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LPSS+C FK+  T     C  LE  P+ LE++E L    + G+ I+E+P S+ RL  
Sbjct: 1083 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1142

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE------------------- 646
            ++ L L+   NL  +PESI +L+ L  L I  C  L+ LPE                   
Sbjct: 1143 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1202

Query: 647  ---LP-----CNLGLLSARNC------------TSLE----------KLPAGLSSMSSVL 676
                P     C+L +L   NC            TSL+           +P G+S +  ++
Sbjct: 1203 NCQXPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLI 1262

Query: 677  YVNL--CNFLKLDPNELSEIVK-----------DGWMKHSLYEERGIKK--------SMY 715
             +NL  C  L+  P   S +                +  S + + GI+K          +
Sbjct: 1263 VLNLSHCKLLQHIPEPPSNLXTLVAHQCTSLKISSSLLWSPFFKSGIQKFVPXXKXLDTF 1322

Query: 716  FP-GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             P  N IP+W  HQ  GS  TL T P      +  + FA C++ V
Sbjct: 1323 IPESNGIPEWISHQKKGSKITL-TLPQNWYENDDFLGFALCSLHV 1366


>gi|82542039|gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 255/744 (34%), Positives = 389/744 (52%), Gaps = 114/744 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGE+TR  FT HL+  L    I TF  DD+L RG+ IS+ LL  I  S I+I+
Sbjct: 15  YDVFLSFRGEETRKTFTGHLYAALDQAGIHTFRDDDELPRGEEISEHLLEAIRESKISIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSR-LRK 97
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +   +
Sbjct: 75  VFSKGYASSRWCLNELVEILKCKRKKTGQIVLPIFYDIDPSDVRKQTGSFAEAFDKHEEE 134

Query: 98  RFPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
           RF EK+ K W+ AL +A +LSG+  N +    E+K I+ I  DVL +L        + LV
Sbjct: 135 RFEEKLVKEWRKALEDAGNLSGWSLNDMANGHEAKFIKGIIKDVLNKLRRECLYVPEHLV 194

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G++ +  +I   L   ++ V  + I G+ GI K TIA  VFN++   F+GS F  ++ E 
Sbjct: 195 GMDLA-HDIYDFLSNATDDVRIVGIHGMPGIGKTTIAKVVFNQLCNGFDGSCFLSDINER 253

Query: 214 AEETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT------- 260
           +++  G+  LQK+LL ++ K    N   ++        RL RK+V +V DDV        
Sbjct: 254 SKQVNGLALLQKRLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKA 313

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTR+  +L+   A++ Y+++EL    + +LF   AF        
Sbjct: 314 LMGDRSWFGPGSRVIITTRNSNLLRK--ADRTYQIEELTRDQSLQLFSWHAFEDTKPAED 371

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +IEL+ KA+ Y  G+PLAL V+G  L G++++ W+S + KL+ IP+ +I+  L+ISYD L
Sbjct: 372 YIELSKKAVDYCGGLPLALDVMGACLSGKNRDGWKSVIDKLKRIPNHDIQRKLRISYDLL 431

Query: 372 DDSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMH 416
           D  + KN FLDIACF     ++ +  +  A               +SLI + L   + MH
Sbjct: 432 DGEELKNAFLDIACFFIDRKKEYIAKLLGARCGYNPEVDLQTLHERSLIKV-LGETVTMH 490

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DLLRDMGRE+VR+     PGKR R+W+ +D + VL++  GTE +EG+ LD+ + +    +
Sbjct: 491 DLLRDMGREVVRESPPKEPGKRTRIWNQEDAWNVLQQQKGTEVVEGLKLDV-RASETKSL 549

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEK 531
           ++ +F+KM  L  L+  G       +HL G   +   E+  + W + PLK    +   + 
Sbjct: 550 STGSFAKMKGLNLLQING-------AHLTGSFKLLSKELMWICWHEFPLKYFPSDFTLDN 602

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           L  L M  + +++LW                        K+L++L  ++ NL +      
Sbjct: 603 LAVLDMQYSNLKELWKGK---------------------KILDKL--KILNLSH----SQ 635

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            + + P+     S +++LIL   S+L  + +SI +L+ L FL +  C  L+TLPE   N+
Sbjct: 636 HLIKTPDL--HSSSLEKLILEGCSSLVEVHQSIENLTSLVFLNLKGCWSLKTLPESIDNV 693

Query: 652 GLLSARN---CTSLEKLPAGLSSM 672
             L   N   C+ +EKLP  +  M
Sbjct: 694 KSLETLNISGCSQVEKLPERMGDM 717


>gi|356573485|ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 270/784 (34%), Positives = 411/784 (52%), Gaps = 99/784 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRG-DNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  F  +L+  L+ K I TFIDD+ ++G + I+ +L+  IE S IAI 
Sbjct: 73  YDVFLSFRGSDTRHGFVGNLYKALNDKGIHTFIDDEKLQGGEEITPTLMKAIEESQIAIT 132

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS +                     FY +DPS VR Q  S+G   +R  +RF 
Sbjct: 133 VLSHNYASSSFCLDELVHIIDCKRKGLLVLPVFYNLDPSDVRHQKGSYGEALARHEERFK 192

Query: 101 ----------EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSK 149
                     E++++WK AL + A+LSG+        E + I +I   V  + +      
Sbjct: 193 AKKERLNQNMERLEKWKMALHQVANLSGYHFKQGDGYEYEFIGKIVEMVSGKTNRALLHI 252

Query: 150 NKGLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
               VG+E  + E+  LL +G+ +GV  + I GIGGI K T+A AV+N ++ HF+GS F 
Sbjct: 253 ADYPVGLESQVLEVVKLLDVGANDGVHMIGIHGIGGIGKTTLALAVYNYVADHFDGSCFL 312

Query: 209 LNVREAEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT-- 260
            NVRE  +  G++ LQ  +LSEL K+  M      + I    +RL RKKV ++ DDV   
Sbjct: 313 ENVRENSDKHGLQHLQSIILSELVKENKMNIATVKQGISMIQHRLQRKKVLLIVDDVDKP 372

Query: 261 --------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                         SGSR+IITTRD+++L +    + Y + EL   DA +L    AF   
Sbjct: 373 EQLQAIVGRPDWFGSGSRIIITTRDEKLLASHEVRRTYEVNELNRNDALQLLTWEAFKMQ 432

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
            +D S+ E+ ++ + YA G+PLALKV+G  L G+S + W+SA+ + + IP+ +I ++LK+
Sbjct: 433 KVDPSYEEMLNRVVTYASGLPLALKVIGSNLFGKSIQEWKSAINQYQRIPNNQILKILKV 492

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLF-Y 411
           S+D+L++ +K+VFLDIAC  +G   +EV  I  A               KSL+ L +   
Sbjct: 493 SFDALEEEEKSVFLDIACCFKGCELEEVEDILHAHYGDCMKYHIGVLIDKSLLKLSVHGT 552

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            + +HDL+ DMGREIVR+ES   PGKR+RLW H+DI QVL+ NTGT  IE I L+   ++
Sbjct: 553 MVTLHDLIEDMGREIVRQESPKDPGKRSRLWFHEDIIQVLEDNTGTSEIEIICLNFPLLD 612

Query: 472 RE--IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NI 527
           +E  +  N  AF KM  L+ L     K+         +P + +R LEW + P   L  + 
Sbjct: 613 KEDIVEWNRKAFKKMKNLKTLII---KSGHFCKGPRYLPNS-LRVLEWWRYPSHDLPSDF 668

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEY 585
            ++KL   K+P      L      L   L  F +     +  CK L ++PD   L NLE 
Sbjct: 669 RSKKLGICKLPHCCFTSL-----ELVGFLTKFMSMRVLNLDKCKCLTQIPDVSGLPNLEK 723

Query: 586 LTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L+ +    +  +  S+G L  +K L     + L   P     L+ L  L +S C  L++ 
Sbjct: 724 LSFQHCQNLTTIHSSIGFLYKLKILSAFGCTKLVSFPPI--KLTSLEKLNLSRCHSLESF 781

Query: 645 PELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN-----ELSEIV 695
           PE+   +  +    C  TS+++LP+ + +++ +  + L  C  ++L  +     EL+E++
Sbjct: 782 PEILGKMENIRELQCEYTSIKELPSSIHNLTRLQELQLANCGVVQLPSSIVMMPELTELI 841

Query: 696 KDGW 699
             GW
Sbjct: 842 --GW 843



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 64/265 (24%)

Query: 602  RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
            R + VK L LS N N   +PE I+    L  L ++ C+ LQ +  +P +L    A NC S
Sbjct: 890  RFAHVKDLNLSKN-NFTMLPECIKEFQFLRKLNVNDCKHLQEIRGIPPSLKHFLATNCKS 948

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
            L       +S S+ +++N             E+ + G            K   Y PG  I
Sbjct: 949  L-------TSSSTSMFLN------------QELHETG------------KTQFYLPGERI 977

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVY 781
            P+WF HQS G S +   R       NK      C +V+ P           +DD    + 
Sbjct: 978  PEWFDHQSRGPSISFWFR-------NKFPGKVLC-LVIGPM----------DDDSGMLIS 1019

Query: 782  AVCCDWKRKSEGHLYSWFLGKISYVESDHVF---LGCNSFGGEYFGPNYDEFSFRIHCSF 838
             V  +  +   G  Y + +G       DH +   L    F    + P  +E++   H   
Sbjct: 1020 KVIINGNKYFRGSGY-FMMG------MDHTYLFDLQIMEFEDNLYVPLENEWN---HAEV 1069

Query: 839  HFPPYLERGEVKKCGIHFVYAQDSA 863
             +    E    K+CGIH V+ Q+S+
Sbjct: 1070 TYEGLEETSTPKECGIH-VFKQESS 1093


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 219/553 (39%), Positives = 309/553 (55%), Gaps = 60/553 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR NFT HL+  L  + I+TF DD L RG+ I   LL  IE S  ++I+
Sbjct: 23  YDVFLSFRGADTRYNFTDHLYKALDRRGIRTFRDDTLRRGEAIDPELLKAIEGSRSSVIV 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA SR                       FY VDPSHVRKQ  SFG  F+   + + 
Sbjct: 83  FSENYAHSRSCLDELVKIMECQKDLGHTVIPIFYHVDPSHVRKQEGSFGAAFAGYEENWK 142

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ RW+ ALTEAA+LSG+       ES  I++I +D+ ++L+         LVG++  +
Sbjct: 143 DKIPRWRTALTEAANLSGWHLQD-GYESDNIKKITDDIFRQLNCKRLDVGDNLVGIDFRL 201

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           +E++  L + S+ V  + I+GIGGI K TIA  ++N +S  FE   F  N+R    T G+
Sbjct: 202 KEMDLRLDMESDAVRIVGIYGIGGIGKTTIARVIYNNLSSEFECMSFLENIRGVSNTRGL 261

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNR-------LARKKVRIVFDDVTS------------ 261
             LQ +LL ++     ++NI    +        L+ K+V IV DDV +            
Sbjct: 262 PHLQNQLLGDILGGEGIQNINCVSHGAIMIKSILSSKRVFIVLDDVDNLVQLEYLLRNRG 321

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVIITTR+K +L     +  Y + +L + +A++LF  +AF  +H  +  + L+ 
Sbjct: 322 WLGKGSRVIITTRNKHLLNVQGVDDLYEVDQLNFNEAYELFSLYAFKQNHPKSGFVNLSY 381

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
            A+ Y Q +PLALKVLG  L  ++   WES + KLE +P  EI  VLK SYD LD ++KN
Sbjct: 382 SAVSYCQHLPLALKVLGSLLFSKTIPQWESELLKLERVPEAEIHNVLKRSYDGLDRTEKN 441

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIACF + E RD V+ I D               KSLI L  + +IR+HDL++ MG 
Sbjct: 442 IFLDIACFFKDEDRDFVLRILDGCNFHAERGIENLIDKSLITLS-YNQIRLHDLIQQMGW 500

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR+   N P K +RLW   DI + L    G + +E I+LD++K+ R +  NS  FSKM
Sbjct: 501 EIVRENFPNEPDKWSRLWDPHDIERALTTYEGIKGVETINLDLSKLKR-VRFNSNVFSKM 559

Query: 485 PKLRFLRFYGDKN 497
            +LR L+ + + N
Sbjct: 560 SRLRLLKVHSNVN 572



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 30/163 (18%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   K+     + DC   E  P++   +++L+ L++K T I++LP+S+G L  
Sbjct: 961  IKGLPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTAIKDLPDSIGDLES 1020

Query: 606  VKRLILSNNSNLERIPE-----------------------SIRHLSKLTFLFISHCERLQ 642
            +  L L+N S  E+ PE                       SI  L  L FL +S C + +
Sbjct: 1021 LWFLDLTNCSKFEKFPEKGGNMKSLRVLYLNDTAIKDLPDSIGDLESLEFLDLSDCSKFE 1080

Query: 643  TLPELPCN---LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
              PE   N   L  LS +N T+++ LP  +  + S+ +++L +
Sbjct: 1081 KFPEKGGNMKSLKKLSLKN-TAIKDLPYSIRDLESLWFLDLSD 1122



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 18/153 (11%)

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
           +P  E+R+L W   PL +L  N   E LV L + C+ ++QLW   + L S          
Sbjct: 666 IPSYELRYLYWDGYPLDSLPSNFDGENLVELHLKCSNIKQLWQGNKYLES---------- 715

Query: 565 FEIIDCKM---LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLE 618
            ++ID      L ++P+   L NLE L +KG  ++ ++  S+G L  +  L L     ++
Sbjct: 716 LKVIDLSYSTKLIQMPEFSSLSNLERLILKGCVSLIDIHPSIGGLKKLTTLNLKWCLKIK 775

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            +P SI  L  L  L +S C       E+  N+
Sbjct: 776 GLPSSISMLESLQLLDLSKCSSFCKFSEIQGNM 808



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 573  LERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
            ++ LP  + N E L      K +   + PE  G ++ +K+L+L NN+ ++ +P+SI +L 
Sbjct: 914  IKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLKKLLL-NNTAIKGLPDSIGYLK 972

Query: 629  KLTFLFISHCERLQTLPELPCN---LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
             L  L +S C + +  PE   N   L  LS +N T+++ LP  +  + S+ +++L N
Sbjct: 973  SLEILNVSDCSKFENFPEKGGNMKSLKELSLKN-TAIKDLPDSIGDLESLWFLDLTN 1028



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 25/192 (13%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++    ++ DC   E+ P++   +++L+ L++K T I++LP S+  L  
Sbjct: 1055 IKDLPDSIGDLESLEFLDLSDCSKFEKFPEKGGNMKSLKKLSLKNTAIKDLPYSIRDLES 1114

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L LS+ S  E+ PE   ++  L  L + +   ++ LP     L  L   N      L
Sbjct: 1115 LWFLDLSDCSKFEKFPEKGGNMKSLMDLRLKNTA-IKDLPNNISGLKFLETLNLGGCSDL 1173

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
              GL S        LCN  K++  EL       W  +++  E           + I +W 
Sbjct: 1174 WEGLISNQ------LCNLQKINIPELK-----CWKLNAVIPE----------SSGILEWI 1212

Query: 726  RHQSMGSSATLK 737
            R+  +GS  T K
Sbjct: 1213 RYHILGSEVTAK 1224


>gi|356545721|ref|XP_003541284.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 653

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 221/611 (36%), Positives = 328/611 (53%), Gaps = 137/611 (22%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFT HL+  L  K IKT+ID+QL +GD I+ +L   IE SCI+I+I
Sbjct: 24  YDVFLSFRGEDTRRNFTCHLYEALMQKKIKTYIDEQLEKGDQIALALTKAIEDSCISIVI 83

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS+W                      FY +DPSHVRKQ  S+ + F++L    P
Sbjct: 84  FSDNYASSKWCLGELFKILECKKEKGQIVIPVFYNIDPSHVRKQIGSYKQAFAKLEGE-P 142

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E   +WK+ALTEAA+L G DS   R + +L+++I   V ++L   +Q+++KGLVG+E   
Sbjct: 143 E-CNKWKDALTEAANLVGLDSKNYRNDVELLKDIVRAVSEKLPRRYQNQSKGLVGIEEHY 201

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           + IES L  GS  V  L IWG+GGI K T+A A++N++S  FEG  F +NV +       
Sbjct: 202 KRIESFLNNGSSEVRTLGIWGMGGIGKSTLATALYNELSPEFEGHCFFINVFD------- 254

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------GSR 264
                               +S+++ L  K+V IV DDV +                GSR
Sbjct: 255 --------------------KSEMSNLQGKRVFIVLDDVATSEQLEKLIGEYDFLGLGSR 294

Query: 265 VIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQ 324
           VI+T+R+KQ+L     ++ Y ++EL    + +LFC   FG +     + +L+ + I Y  
Sbjct: 295 VIVTSRNKQMLS--LVDEIYSVEELSSHHSLQLFCLTVFGEEQPKDGYEDLSRRVIFY-- 350

Query: 325 GVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIAC 384
                     C  C + KE++                                  LD+AC
Sbjct: 351 ----------CKDCSQ-KEIF----------------------------------LDLAC 365

Query: 385 FLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKES 431
           F +G  RD V  + +A              KSLI +  +  I MHDL ++MGREI+R++S
Sbjct: 366 FFKGGKRDWVAGLLEAFGFFPASEIEVLLDKSLIRISKYNEIEMHDLTQEMGREIIRQQS 425

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
           I  PG+R+RL  H+++  VLK N GT+ +EGI L+++K+  ++ ++S + +KM  LRFLR
Sbjct: 426 IKDPGRRSRLCKHEEVVDVLKHNKGTDVVEGIILNLHKLTGDLFLSSDSLAKMTNLRFLR 485

Query: 492 FY------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
            +         N  + + LE +   ++R+L W +C L++L  N CAE+LV + MP +K++
Sbjct: 486 IHKGWRSNNQFNVFLSNGLESLS-NKLRYLHWDECCLESLPSNFCAEQLVEISMPRSKLK 544

Query: 544 QLWDDVQRLPS 554
           +LWD VQ L S
Sbjct: 545 KLWDGVQNLVS 555


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 249/751 (33%), Positives = 400/751 (53%), Gaps = 107/751 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+ FT +L+  L  K I TFIDD+ L +G+ I+ +L+  I+ S IAI+
Sbjct: 22  YDVFLSFRGEDTRNGFTGNLYKALCGKGINTFIDDKNLGKGEEITPALMMAIQESRIAIV 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKR 98
           IFSE YASS +                      FY+VDP+ VR Q  S+     S  RK+
Sbjct: 82  IFSENYASSTFCLKELTKIMECIKHKGRLVLPIFYQVDPADVRHQKGSYANALASHERKK 141

Query: 99  FPEKM--KRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
             +K+  K+W+ AL EAA + G  F+      E +LI +I  +V K+++       K  +
Sbjct: 142 TIDKIMVKQWRLALQEAASILGWHFEHGY---EYELIGKIVQEVSKKINHRPLHVAKYPI 198

Query: 155 GVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G+E  ++++ SLL + S EGV  + I+G+GG+ K T+A AV+N I+  F+   F  ++RE
Sbjct: 199 GLESRVQKVNSLLEVESNEGVRMVGIYGMGGLGKTTLACAVYNCIADQFDSLCFLGDIRE 258

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------ 261
             +  G+ +LQ  LL EL+ + +++       I    +RL  +K+ ++ DD+ S      
Sbjct: 259 NSKKRGLVELQDMLLFELTGEKDIKLCSLNKAIPIIESRLRGRKILLILDDIDSLEQLKA 318

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L+     + Y ++ L + +A +LF   AF    ++ S
Sbjct: 319 LAGGLEWFGSGSRVIITTRDKHLLQVYGVERVYEVEGLKHEEALELFVWNAFKSKEVEPS 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++  K + Y++G+PLA++++G  L G++   W+SA+   E IPH  I+++L++SYD L
Sbjct: 379 YFDIAKKVLLYSKGLPLAIEIIGSDLYGKTILEWQSAIDTYERIPHENIQDILRVSYDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS--------------KSLINLDLFYRIRMHD 417
            + +K +FLDI CF +G    +V++I  +               KSLI ++  YR+R+HD
Sbjct: 439 KEFEKEIFLDITCFFKGYKLSDVMNILHSGRGYAPDYAVQVLIDKSLIKMN-EYRVRIHD 497

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           ++ DMGREIVR ES + PG R+RLW  KDI  VLK+N G++  E I L++ K ++E+  +
Sbjct: 498 MIEDMGREIVRLESPSKPGGRSRLWFTKDILHVLKENKGSDKTEIIVLNLLK-DKEVQWD 556

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
             A   M  L+ L     +     +HL       +R L+W   P  +L  +   +KLV L
Sbjct: 557 GNALKNMENLKILVIEKTRFSRGPNHLP----KSLRVLKWFDYPESSLPAHYNPKKLVIL 612

Query: 536 KMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIR 594
            +   T +    + +      +  FK+    +I  C+ L+++PD                
Sbjct: 613 DLSDSTGLFTFGNQM------IMKFKSLKEMKISKCQSLKKVPD---------------- 650

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPCNL 651
                +     +K+L L +  +L  + +SI  L KL  L +++C  L  LP    LP +L
Sbjct: 651 -----MSGAPNLKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGINLP-SL 704

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
             +S RNCT+++  P  L  M ++ Y+ L N
Sbjct: 705 KTMSLRNCTTVKNFPEILGKMENIKYLVLSN 735



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 62/198 (31%)

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
           S++  +P SI     L  L +++C  L+ +  LP N+  L A NC S       L+S S 
Sbjct: 846 SSITILPSSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCES-------LTSQSK 898

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
            + +N                        +    GIK  +Y PG+ IP WF  ++   S 
Sbjct: 899 EMLLN-----------------------QMLLNSGIKYIIY-PGSSIPSWFHQRTCEQSQ 934

Query: 735 TLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH 794
           +   R       NKL   A C V V  +                      CD+  +S+ +
Sbjct: 935 SFWFR-------NKLPEMALCLVGVLGS----------------------CDFTARSDEY 965

Query: 795 LYSWFLGKISYVESDHVF 812
           ++   + +    +S+H+F
Sbjct: 966 IFDLIIDRNQ--QSNHIF 981


>gi|358248980|ref|NP_001239717.1| TMV resistance protein N-like [Glycine max]
 gi|223452611|gb|ACM89632.1| candidate disease-resistance protein [Glycine max]
          Length = 1029

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 288/869 (33%), Positives = 419/869 (48%), Gaps = 141/869 (16%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAI 59
           +YDVFL+FRGEDTR  FT +L+  L  K I TF D D+L  GD+I+ +L   I+ S IAI
Sbjct: 11  IYDVFLNFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGDDITPALSKAIQESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     F+ VDPS VR    S+G   ++ +KRF
Sbjct: 71  TVLSQNYASSSFCLDELVTILHCKREGLLVIPVFHNVDPSAVRHLKGSYGEAMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I  I  +V ++++          
Sbjct: 131 KAKKEKLQKWRMALHQVADLSGYHFKDGDAY--EYKFIGNIVEEVSRKINCAPLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS+ +  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 189 VGLGSQVIEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALAVYNFIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS----- 261
           E     G+K  Q  LLS+L  + ++     Q       +RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHFQSILLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLE 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L +  A +L    AF  + +D 
Sbjct: 309 AIVGRSDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNHNAALQLLTWNAFKREKIDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            + ++ ++ + YA G+PLAL+V+G  L G++   WESA+   + IP  EI ++LK+S+D+
Sbjct: 369 IYDDVLNRVVTYASGLPLALEVIGSDLFGKTVAEWESAVEHYKRIPSDEILKILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLF--YRIR 414
           L + QKNVFLDIAC  +G    EV  I  A               KSLI L+ +    + 
Sbjct: 429 LGEEQKNVFLDIACCFKGYKWTEVDDILRAFYGNCKKHHIGVLVEKSLIKLNCYDSGTVE 488

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DMGREI R+ S   P K  RLW  KDI+QVLK NTGT  IE I LD +  ++E 
Sbjct: 489 MHDLIQDMGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNTGTSKIEIICLDFSISDKEE 548

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            +  N  AF KM  L+ L     K +K      EG+       LEW + P   L  N   
Sbjct: 549 TVEWNENAFMKMENLKILIIRNGKFSKGPNYFPEGLTV-----LEWHRYPSNCLPYNFHP 603

Query: 530 EKLVSLKMPCTKV---------EQLW----------------DDVQRLPS---------- 554
             L+  K+P + +         ++ W                 DV  LP+          
Sbjct: 604 NNLLICKLPDSSITSFELHGPSKKFWHLTVLNFDQCEFLTQIPDVSDLPNLKELSFDWCE 663

Query: 555 SLCTFKTPITF-------EIIDCKMLERLPD-ELENLEYLTVKG-TTIRELPESLGRLSW 605
           SL      I F           C+ L   P   L +LE L + G +++   PE LG +  
Sbjct: 664 SLIAVDDSIGFLNKLKKLSAYGCRKLRSFPPLNLTSLETLQLSGCSSLEYFPEILGEMEN 723

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA------RNC 659
           +K L L +   ++ +P S ++L  L  L ++ C  +Q    LPC+L ++         NC
Sbjct: 724 IKALDL-DGLPIKELPFSFQNLIGLCRLTLNSCGIIQ----LPCSLAMMPELSVFRIENC 778

Query: 660 TSLEKLPA--GLSSMSSVLYVNLC-NFLKLDPNELSEI-VKDGWMKHSLYEERGIKKSMY 715
                + +  G    + V Y++L  N   + P    E+      MK  L+E  G   +  
Sbjct: 779 NRWHWVESEEGSKRFTRVEYLDLSGNNFTILPEFFKELQFLRALMK--LHEAGGT--NFM 834

Query: 716 FPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
           F G  IP+W   QS G S++   R   PA
Sbjct: 835 FTGTRIPEWLDQQSSGHSSSFWFRNKFPA 863


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 256/778 (32%), Positives = 384/778 (49%), Gaps = 144/778 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL+ K IKTF DD+ +  G  I   L   IE S  AI+
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 72  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++RW+ AL EAA+L G   N  + ++  I +I + +  +L     S  + +VG+
Sbjct: 132 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQNIVGI 191

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +E+IESLL IG  GV  + IWG+GG+ K TIA A+F+ +      S  F+G+ F  +
Sbjct: 192 DTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKD 251

Query: 211 VREAEETGGIKDLQKKLLSELSKD-GNMRNIE----SQLNRLARKKVRIVFDDVTS---- 261
           ++E +   G+  LQ  LLSEL ++  N  N E       +RL  KKV IV DD+ +    
Sbjct: 252 IKENKR--GMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHY 309

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+IITTRDK +++    +  Y +  L   ++ +LF Q AFG +  
Sbjct: 310 LEYLAGDLDWFGNGSRIIITTRDKHLIEK--NDIIYEVTALPDHESIQLFKQHAFGKEVP 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           + +  +L+ + + YA+G+PLALKV G  L       W+SA+  ++   +  I + LKISY
Sbjct: 368 NENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKISY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L+  Q+ +FLDIACFL GE +D ++ I ++              KSL+ +  + +++M
Sbjct: 428 DGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQM 487

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++DMG+ IV  +    PG+R+RLW  K++ +V+  NTGT A+E I +  +  +  + 
Sbjct: 488 HDLIQDMGKYIVNFQK--DPGERSRLWLAKEVEEVMSNNTGTMAMEAIWV--SSYSSTLR 543

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEV-RHLEWPQCPLKTLNICAEKLVS 534
            ++ A   M +LR            + +L       V  +  W   P  T  +  + LV 
Sbjct: 544 FSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFP-STFEL--KMLVH 600

Query: 535 LKMPCTKVEQLWDDVQRLPS---------------------------------------- 554
           L++    +  LW + + LPS                                        
Sbjct: 601 LQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHH 660

Query: 555 SLCTFKTPITFEIIDCKMLERLP-DELENLEYLTVK------------------------ 589
           SL      I   + DCK L+R P   +E+LEYL ++                        
Sbjct: 661 SLGCCSKVIGLYLNDCKSLKRFPCVNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQ 720

Query: 590 GTTIRELPESLGRL-SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           G+ IRELP S+ +  + V +L+L N  NL  +P SI  L  L  L +S C +L++LPE
Sbjct: 721 GSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPE 778



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 66/274 (24%)

Query: 545  LWD--DVQRLPSSLCTFKTPITFEIIDCKMLERLPDE----------------------- 579
            LW+  ++  LPSS+C  K+ ++  +  C  LE LP+E                       
Sbjct: 743  LWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSS 802

Query: 580  -----------------------------LENLEYLTVKGTTIRE--LPESLGRLSWVKR 608
                                         L +LEYL +    + +  LPE +G LS +K+
Sbjct: 803  IIRLNKLIILMFRGFKDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKK 862

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
            L LS N N E +P SI  L  L  L +  C+RL  LPELP  L  L      +L+ +   
Sbjct: 863  LDLSRN-NFEHLPSSIAQLGALQSLDLKDCQRLTQLPELPPELNELHVDCHMALKFIHYL 921

Query: 669  LSSMSSVLYVNL---CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY----FPGNEI 721
            ++    +  V L    N    +    +       M+H +     +  +++    +P  +I
Sbjct: 922  VTKRKKLHRVKLDDAHNDTMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYP-EKI 980

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
            P WF HQ   SS ++   P      +K + FA C
Sbjct: 981  PSWFHHQGWDSSVSVNL-PENWYIPDKFLGFAVC 1013


>gi|105922450|gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1867

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 262/757 (34%), Positives = 389/757 (51%), Gaps = 118/757 (15%)

Query: 8    FRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERY 66
            FRG+DTR+NFTSHL+  L+ + IK + DD +L RG  I  +L   IE S  + IIFS  Y
Sbjct: 844  FRGKDTRNNFTSHLYSNLTQRGIKVYRDDSELERGKTIEPALWKAIEESRFSAIIFSRDY 903

Query: 67   ASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE---K 102
            ASS W                      FY VDPS V +Q   + + F +  + F E   K
Sbjct: 904  ASSPWCLDELVKIVQCMKEKGQTVLPVFYDVDPSEVAEQKGKYKKAFVKHEQNFKENLEK 963

Query: 103  MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
            ++ WK+ L+  A+LSG+D    R ES+ I+ IA+ +  +L  T  + +K LVG++  +E 
Sbjct: 964  VRNWKDCLSMVANLSGWDVRN-RDESESIKAIADCISYKLSLTLPTISKELVGIDSRLEV 1022

Query: 163  IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIK 221
            +   +   +     + I G+GGI K T+A  ++++I R FEGS F  NVREA  E  G +
Sbjct: 1023 LNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPR 1082

Query: 222  DLQKKLLSE--LSKDGNM----RNIESQLNRLARKKVRIVFDDVTS-------------- 261
             LQKKLLS+  + +D N+      IE    +L R K+ +V DDV                
Sbjct: 1083 SLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWF 1142

Query: 262  --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
              GSR+IIT+RD  VL      K Y  ++L   DA  LF Q AF  D      +EL+ + 
Sbjct: 1143 GPGSRIIITSRDTNVLIGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQV 1202

Query: 320  IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
            + YA G+PLAL+V+G +L  RS   W  A+ ++  IP  +I +VL++S+D L +S K +F
Sbjct: 1203 VDYANGLPLALEVIGSFLYERSIPEWRGAINRMNEIPDCKIIDVLRVSFDGLHESDKKIF 1262

Query: 380  LDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREI 426
            LDIACFL+G  +D +  I ++              +SLI++    ++ MHDLL+ MG+EI
Sbjct: 1263 LDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSR-DQVWMHDLLQIMGKEI 1321

Query: 427  VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
            VR ES   PG+R+RLW ++D+   L  NTG E IE I LDM  + +E   N  AFSKM +
Sbjct: 1322 VRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSR 1380

Query: 487  LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
            LR L+     N   +S        ++R LEW   P K+L   +  ++LV L M  + +EQ
Sbjct: 1381 LRLLKI----NNLQLSKGPEDLSNQLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQ 1436

Query: 545  LWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLTVKGTTIRELPES 599
            LW            +K+ +  +II+      L R PD   + NLE L ++G T       
Sbjct: 1437 LW----------YGYKSAVNLKIINLSNSLNLSRTPDLTGIPNLESLILEGCT------- 1479

Query: 600  LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPCNLGLLSA 656
                            +L ++  S+     L ++ + +CE ++ LP   E+  +L + + 
Sbjct: 1480 ----------------SLSKVHPSLGSHKNLQYVNLVNCESIRILPSNLEME-SLKVFTL 1522

Query: 657  RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
              C+ LEK P  L +M+ ++   LC    LD  EL E
Sbjct: 1523 DGCSKLEKFPDVLGNMNCLMV--LC----LDETELKE 1553


>gi|357503303|ref|XP_003621940.1| TMV resistance protein N [Medicago truncatula]
 gi|355496955|gb|AES78158.1| TMV resistance protein N [Medicago truncatula]
          Length = 1093

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 249/783 (31%), Positives = 398/783 (50%), Gaps = 94/783 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR    SHL+  L    I TF+DD+ L +G+ +   L   I+ S I I 
Sbjct: 10  YDVFINFRGEDTRRTIVSHLYTALCNAGINTFLDDKKLAKGEELGPELYTAIKMSHIFIA 69

Query: 61  IFSERYASSRW-------------------------FFYRVDPSHVRKQSHSFGRHFS-R 94
           +FS  YA S W                          FY VDPS VRK    FG+     
Sbjct: 70  VFSPNYAQSSWCLNELAHIMELRHRRHSYSPRVVIPLFYHVDPSDVRKLKGDFGKGLKVS 129

Query: 95  LRKRFPEK--------MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATF 146
             K F +         M +W+ AL E  +L G+D+N  R E  L++++  D+L +LD + 
Sbjct: 130 ADKIFSQSGAEREEVLMSKWRRALAEVTNLVGWDANNFRNEGDLVQKLVEDILTKLDMSV 189

Query: 147 QSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-S 205
            S  +  VG+E  ++ I  +L   S   C + +WG+GG  K T+A A++N+I R F+G +
Sbjct: 190 LSITEFPVGLEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKT 249

Query: 206 YFALNVREAEETG--GIKDLQKKLLSELSKDGN-MRNIESQLN----RLARKKVRIVFDD 258
            F  ++RE  +    GI  LQ++LLS+L K  + + +I   +N    RL  +KV IV DD
Sbjct: 250 SFIESIREVCDYNRKGIIHLQEQLLSDLLKTKDKIHSIAVGINKIEKRLQGQKVLIVLDD 309

Query: 259 VT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA 302
           VT                SGS +IITTRD+  L +  A + + M E+   ++ +LF   A
Sbjct: 310 VTKSEQLKALGGNPKLFGSGSVLIITTRDRSHLDSLSA-RVFTMIEMDKNESLELFSWHA 368

Query: 303 FGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEE 362
           F          +L+   + Y +G+PLAL+VLG YL  R+++ W SA+ KL  IP+ E+ +
Sbjct: 369 FRQSCPRKDFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEVLQ 428

Query: 363 VLKISYDSLDD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLD 408
           +L+ISYD L+D ++K++FLDI CF  G++R +V  I +               +SLI +D
Sbjct: 429 ILRISYDGLEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVD 488

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
              + +MHDLLRDMGR IV + S   P K +RLW H+D+  VL K TGT+ +EG+ L   
Sbjct: 489 KNNKFQMHDLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLILKWQ 548

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
           +  R I   + AF +M KLR L+  G     ++    G+   ++R ++W +     +  +
Sbjct: 549 RTGR-ICFGTNAFQEMEKLRLLKLDGVD---LIGDY-GLISKQLRWVDWQRSTFTFIPND 603

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE 584
                LV  ++  + V+Q+W D + L        +         K L+  PD  +L NLE
Sbjct: 604 FDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLS-------HSKYLKSSPDFSKLPNLE 656

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            L +K   ++  +  S+G L  +  + L +   LE +P  I  L  +  L ++ C  +  
Sbjct: 657 KLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDK 716

Query: 644 LPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
           L E    +  L++     TS++++P  +  + S++Y+++C +  L       +++  WM 
Sbjct: 717 LEEDIVQMESLTSLITTGTSIKEVPYSILRLRSIVYISICGYEGLSHEVFPSLIR-FWMS 775

Query: 702 HSL 704
            ++
Sbjct: 776 PTI 778


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 256/778 (32%), Positives = 384/778 (49%), Gaps = 144/778 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL+ K IKTF DD+ +  G  I   L   IE S  AI+
Sbjct: 4   YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 63

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 64  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 123

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++RW+ AL EAA+L G   N  + ++  I +I + +  +L     S  + +VG+
Sbjct: 124 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQNIVGI 183

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +E+IESLL IG  GV  + IWG+GG+ K TIA A+F+ +      S  F+G+ F  +
Sbjct: 184 DTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKD 243

Query: 211 VREAEETGGIKDLQKKLLSELSKD-GNMRNIE----SQLNRLARKKVRIVFDDVTS---- 261
           ++E +   G+  LQ  LLSEL ++  N  N E       +RL  KKV IV DD+ +    
Sbjct: 244 IKENKR--GMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHY 301

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+IITTRDK +++    +  Y +  L   ++ +LF Q AFG +  
Sbjct: 302 LEYLAGDLDWFGNGSRIIITTRDKHLIEK--NDIIYEVTALPDHESIQLFKQHAFGKEVP 359

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           + +  +L+ + + YA+G+PLALKV G  L       W+SA+  ++   +  I + LKISY
Sbjct: 360 NENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKISY 419

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L+  Q+ +FLDIACFL GE +D ++ I ++              KSL+ +  + +++M
Sbjct: 420 DGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQM 479

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++DMG+ IV  +    PG+R+RLW  K++ +V+  NTGT A+E I +  +  +  + 
Sbjct: 480 HDLIQDMGKYIVNFQK--DPGERSRLWLAKEVEEVMSNNTGTMAMEAIWV--SSYSSTLR 535

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEV-RHLEWPQCPLKTLNICAEKLVS 534
            ++ A   M +LR            + +L       V  +  W   P  T  +  + LV 
Sbjct: 536 FSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFP-STFEL--KMLVH 592

Query: 535 LKMPCTKVEQLWDDVQRLPS---------------------------------------- 554
           L++    +  LW + + LPS                                        
Sbjct: 593 LQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHH 652

Query: 555 SLCTFKTPITFEIIDCKMLERLP-DELENLEYLTVK------------------------ 589
           SL      I   + DCK L+R P   +E+LEYL ++                        
Sbjct: 653 SLGCCSKVIGLYLNDCKSLKRFPCVNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQ 712

Query: 590 GTTIRELPESLGRL-SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           G+ IRELP S+ +  + V +L+L N  NL  +P SI  L  L  L +S C +L++LPE
Sbjct: 713 GSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPE 770



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 66/274 (24%)

Query: 545  LWD--DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV-----------KGT 591
            LW+  ++  LPSS+C  K+ ++  +  C  LE LP+E+ +L+ L V             +
Sbjct: 735  LWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSS 794

Query: 592  TIR------------------ELP-------------------------ESLGRLSWVKR 608
             IR                  E P                         E +G LS +K+
Sbjct: 795  IIRLNKLIILMFRGFKDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKK 854

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
            L LS N N E +P SI  L  L  L +  C+RL  LPELP  L  L      +L+ +   
Sbjct: 855  LDLSRN-NFEHLPSSIAQLGALQSLDLKDCQRLTQLPELPPELNELHVDCHMALKFIHDL 913

Query: 669  LSSMSSVLYVNL---CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY----FPGNEI 721
            ++    +  V L    N    +    +       M+H +     +  +++    +P  +I
Sbjct: 914  VTKRKKLHRVKLDDAHNDTMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYP-EKI 972

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
            P WF HQ   SS ++   P      +K + FA C
Sbjct: 973  PSWFHHQGWDSSVSVNL-PENWYIPDKFLGFAVC 1005


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 263/797 (32%), Positives = 407/797 (51%), Gaps = 99/797 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VFLSFRGEDTR  FT HL   L  + I TF DDQL RG+ I   LL TIE S I++++
Sbjct: 20  FEVFLSFRGEDTRTIFTDHLFVNLGGRGINTFRDDQLERGEEIKSELLKTIEESRISVVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YA S+W                      FY VDPS VRKQ+ SFG  FS   +   
Sbjct: 80  FSRNYAHSKWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVD 139

Query: 101 EK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           EK ++RW+  LTEA++LSGF  N    ES  IEEI N++LKRL+      +  +VG++  
Sbjct: 140 EKKVQRWRVFLTEASNLSGFHVND-GYESMHIEEITNEILKRLNPKLLHIDDDIVGIDFR 198

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +++++ LL      V  + I+G GGI K TIA  V+N+I   F G+ F  +V+E  + G 
Sbjct: 199 LKKLKLLLSGHLNDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNGC 258

Query: 220 IKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVT-------------- 260
             +LQK+LL   L KD    +I   +N    RL  KK+ IV DDV               
Sbjct: 259 QLELQKQLLRGILGKDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPKW 318

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITTRD+ +L     N  YR+ EL Y +A +LF ++AF  +     +++ ++ 
Sbjct: 319 FGPGSRIIITTRDQHLLGEYGVNIPYRVTELHYKEALQLFSRYAFKQNVPKEDYVDFSNC 378

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YAQG+PLALKVLG  L G + + W SA+ +L+  P  EI +VL+IS+D LD+ +K+V
Sbjct: 379 MVDYAQGLPLALKVLGSSLHGMTIDEWRSALDRLKKNPVKEINDVLRISFDGLDNLEKDV 438

Query: 379 FLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIA F + E +D V  I D               K LI +     I+MHDL+R MG  
Sbjct: 439 FLDIAWFFKKECKDFVSRILDGCNLFATHGITILHDKCLITISDNI-IQMHDLIRQMGWA 497

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR E    P K +RLW   DIY    +      ++ I  D++   + + M    FS MP
Sbjct: 498 IVRDEYPGDPSKWSRLWDVDDIYDAFSRQEFLGKLKVI--DLSDSKQLVKMPK--FSSMP 553

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEW-------------PQCPLKTLNIC---- 528
            L  L   G    C+      +   +++ L +             P    ++L +     
Sbjct: 554 NLERLNLEG----CISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLDR 609

Query: 529 ---AEKLVSLKMPCTKVEQLW---DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN 582
               +K   +      +++L+    +++ LPSS+    +     + +C  LE+ P+   N
Sbjct: 610 CQNLKKFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGN 669

Query: 583 LEYLT---VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           +++L    ++G +   +  ++   +  ++ L L   S ++ +P SI +L  L  L +S+C
Sbjct: 670 MKFLRELHLEGCSKFEKFSDTFTYMEHLRGLHLG-ESGIKELPSSIGYLESLEILDLSYC 728

Query: 639 ERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
            + +  PE+  N+  L     + T++++LP  + S++S+  ++L   LK +  + S+I  
Sbjct: 729 SKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFE--KFSDIFT 786

Query: 697 DGWMKHSLY-EERGIKK 712
           +  +   LY  E GIK+
Sbjct: 787 NMGLLRELYLRESGIKE 803



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 75/360 (20%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTIRE--LPESL 600
            +++  LP+S+ +     T  + +C  L  LPD L +L+    +L + G  + E  +P  L
Sbjct: 986  ENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDL 1045

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
              LS +  L +S N ++  IP  I  LSKL  LF++HC  L+ + E+P +L ++ A  C 
Sbjct: 1046 WCLSLLVSLDVSEN-HIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCP 1104

Query: 661  SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG-N 719
            SLE       + SS+L+ +L    K  P +      + ++    Y +R    S+  PG N
Sbjct: 1105 SLET-----ETFSSLLWSSLLKRFK-SPIQPEFFEPNFFLDLDFYPQRF---SILLPGSN 1155

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGN 779
             IP+W  HQ MG   +++     P  + +  +F          F+ +F H   +DD    
Sbjct: 1156 GIPEWVSHQRMGCEVSIEL----PMNWYEDDNFL--------GFVLFFHHVPLDDDE--- 1200

Query: 780  VYAVCCDWKRKSEGHL--------YSWFLGKISYVESDHVFLGCNSFGGEY--------- 822
                 C+    S  H          S  L +IS+      +L  +   G++         
Sbjct: 1201 -----CETTEGSIPHCELTISHGDQSERLEEISFYFKCKTYLASHLLSGKHCYDSDSTPD 1255

Query: 823  ------FGPNYD---EFSFRIHCSF--HFPPYLERG----------EVKKCGIHFVYAQD 861
                  + P  D   E+  R   +F  HF   +  G          +VK CGIH +YAQD
Sbjct: 1256 PAIWVTYFPQIDIPSEYRSRRRNNFKDHFHTPIGVGSFKCGDNACFKVKSCGIHLLYAQD 1315



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 22/176 (12%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+   ++     +  C   ++ P+    L+ L+ L ++ T I+ELP  +G L  
Sbjct: 801 IKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQA 860

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
           ++ L LS  SN ER PE    + KL  LF+        + ELPC++G L+        NC
Sbjct: 861 LESLALSGCSNFERFPEI--QMGKLWALFLDE----TPIKELPCSIGHLTRLKWLDLENC 914

Query: 660 TSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKD-GWMKHSLYEERGIKK 712
            +L  LP  +  + S+  L +N C+ L+      SEI +D   ++H    E GI +
Sbjct: 915 RNLRSLPNSICGLKSLERLSLNGCSNLE----AFSEITEDMERLEHLFLRETGITE 966



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD-ELENLEYLTVKGTTIRELPESLGRLSWVK 607
           ++ LP+ +   +   +  +  C   ER P+ ++  L  L +  T I+ELP S+G L+ +K
Sbjct: 848 IKELPNGIGCLQALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLK 907

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG-----LLSARNCTSL 662
            L L N  NL  +P SI  L  L  L ++ C  L+   E+  ++       L     T L
Sbjct: 908 WLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITEL 967

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
             L   L  + S+  +N  N + L PN +  + 
Sbjct: 968 PSLIGHLRGLESLELINCENLVAL-PNSIGSLT 999



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 28/155 (18%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LPSS+   ++    ++  C   E+ P+    ++ L+ L +  T I+ELP S+G L+ 
Sbjct: 707 IKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTS 766

Query: 606 VKRL-------------ILSN----------NSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L             I +N           S ++ +P SI +L  L  L +S+C   Q
Sbjct: 767 LEILSLKECLKFEKFSDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQ 826

Query: 643 TLPELPCNLGLLS--ARNCTSLEKLPAGLSSMSSV 675
             PE+  NL  L       T++++LP G+  + ++
Sbjct: 827 KFPEIQGNLKCLKELCLENTAIKELPNGIGCLQAL 861


>gi|356506541|ref|XP_003522038.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 256/714 (35%), Positives = 381/714 (53%), Gaps = 83/714 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGED R  F  +L      K I  FIDD+L +GD I  SL+G I+ S I++ I
Sbjct: 63  YDVFVSFRGEDIRHGFLGYLTEAFHQKQIHAFIDDKLEKGDEIWPSLVGAIQGSLISLTI 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE Y+SSRW                      FY V+P+ VR Q  S+ +  S   K++ 
Sbjct: 123 FSENYSSSRWCLEELVKIIECRETYGQTVIPVFYHVNPTDVRHQKGSYEKALSEHEKKYN 182

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDV---LKRLDATFQSKNKGLVGV 156
              ++ W++AL +AADLSG  S   + E +L+ EI N V   L RLD    S  KGL+G+
Sbjct: 183 LTTVQNWRHALKKAADLSGIKSFDYKTEVELLGEIINIVNLELMRLDKNPVSL-KGLIGI 241

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           + SI+ +ES+L   S  V  + IWG+GGI K TIA  + NK+   ++G  F +NV+E   
Sbjct: 242 DRSIQYLESMLQHESSNVRVIGIWGMGGIGKTTIAQEILNKLCSGYDGYCFFVNVKEEIR 301

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS--------- 261
             GI  L++   S L ++ N++ I +         ++ R KV IV DDV           
Sbjct: 302 RHGIITLKEIFFSTLLQE-NVKMITANGLPNYIKRKIGRMKVLIVLDDVNDSDLLEKLFG 360

Query: 262 -------GSRVIITTRDKQVL--KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                  GSR+I+TTRDKQVL       +  Y++  L  ++A +LF   AF   H D  +
Sbjct: 361 NHDWFGPGSRIILTTRDKQVLIANKVHVDDIYQVGVLNPSEALELFILHAFNQKHFDMEY 420

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L+ + + YA+G+PL LKVLG  LCG+ KEVWES + KL+ +P+ ++   +++SYD LD
Sbjct: 421 YKLSKRVVCYAKGIPLVLKVLGGLLCGKDKEVWESQLDKLKNMPNTDVYNAMRLSYDDLD 480

Query: 373 DSQKNVFLDIACFLEG---------------EHRDEVISIFD--ASKSLINLDLFYRIRM 415
             ++ +FLD+ACF  G               E  + V+   +    KSLI +  +  + M
Sbjct: 481 RKEQKIFLDLACFFIGLDVKVDLIKVLLKDNERDNSVVVGLERLKDKSLITISKYNIVYM 540

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HD++++MG EIVR+ESI  PG R+RLW   DIY+VLK N GTE+I  I  D++ + RE+ 
Sbjct: 541 HDIIQEMGWEIVRQESIEDPGSRSRLWDADDIYEVLKNNKGTESIRSIRADLSAI-RELK 599

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           ++   F+KM KL+FL F          H       E+R+  W   PLK+L  N  A+ LV
Sbjct: 600 LSPDTFTKMSKLQFLYFPHQGCVDNFPHRLQSFSVELRYFVWRYFPLKSLPENFSAKNLV 659

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L +  ++VE+LWD VQ L       K     ++   K L+ LP+  E  NLE L +   
Sbjct: 660 LLDLSYSRVEKLWDGVQNL-------KNLKEVKVSGSKNLKELPNLSEATNLEVLDISAC 712

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
             +  +  S+  L+ +K + L+  S  + I ++  H S ++F  +    + + L
Sbjct: 713 PQLASVIPSIFSLNKLKIMKLNYQSFTQMIIDN--HTSSISFFTLQGSTKQKKL 764


>gi|325683726|gb|ADZ44604.1| TIR-NBS-LRR type protein [Fragaria x ananassa]
          Length = 630

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 233/627 (37%), Positives = 349/627 (55%), Gaps = 75/627 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VFLSFRGEDTR+NFT HL+  L  K I TF+DDQLIRG+ IS +L+  IE S I+I++
Sbjct: 13  YHVFLSFRGEDTRNNFTGHLYSALREKGIFTFMDDQLIRGEEISPALIQAIEQSKISIVV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YASS+W                      F++VDPS VR    SFG   + L ++F 
Sbjct: 73  FSGNYASSKWCLDELVKILDCKKKIQQIVLPVFFKVDPSDVRNHRGSFGEGLANLERKFK 132

Query: 101 --EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKR-LDATFQSKNKGLVGVE 157
             ++++ WK AL +AA LSG+  +    ES ++ +I   + K  +++T     +  VG++
Sbjct: 133 DEDQVQEWKTALFQAASLSGWHLDEHCSESSIVGKIVEHISKEHVNSTDLDVAEYQVGIQ 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +  I++LL +    V  + IWG+GGI K TIA AV+N I   F+GS F  NVRE  + 
Sbjct: 193 HRVRAIQNLLGVEVRDVHMVGIWGVGGIGKTTIAKAVYNSIVHRFDGSCFLENVRENSKG 252

Query: 218 G-GIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS--------- 261
             G+ +LQK LL E+ K+  +      R I     RL  K+V +V DDV+          
Sbjct: 253 ARGLVELQKILLREILKEREVEVTSVARGINMIKERLQYKRVLLVLDDVSDMNQLNNLAR 312

Query: 262 -------GSRVIITTRDKQVLK--NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                  GSR+IITTRD+++L+      +  Y ++EL   DA +L    AF       S+
Sbjct: 313 QCSWFGMGSRIIITTRDRKLLRCHGVRPDLIYEVQELDEHDALELLSVIAFKRIRPLDSY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            ELT +A++Y QG+PLAL VLG  L G S E+WE+A+   E     EI++VLKIS+D L 
Sbjct: 373 AELTKRAVRYTQGLPLALTVLGSSLRGGSVELWEAALDGSE---SREIKDVLKISFDGLG 429

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA------------SKSLINLDLFYRIRMHDLLR 420
              K  FLDIACF +GEHR+ VI I  A             K+LI++    +I MHDL+ 
Sbjct: 430 HRAKEAFLDIACFFKGEHREHVIKILKACGSEEHFINVLIEKALISVRYMGKIWMHDLIE 489

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGR+IV ++S ++PG R+RLW H+D+Y+VL  N GT  + GI +++ + +  + + + +
Sbjct: 490 EMGRDIVHEQSPDNPGNRSRLWFHEDVYRVLVDNIGTNNVRGIKVELPEDSNVLCLCATS 549

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSLKMP 538
           FS M  L+ +     +   +V   +G+P + +R ++W  CPL+ L+      +L  + MP
Sbjct: 550 FSSMKNLKLIICRAGRYSGVV---DGLPNS-LRVIDWADCPLQVLSSHTIPRELSVIHMP 605

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITF 565
            +++  L D  +     +C+F     F
Sbjct: 606 RSRITVLGDGYK-----VCSFGGTYMF 627


>gi|84313510|gb|ABC55465.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
 gi|84313512|gb|ABC55466.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
          Length = 642

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 223/614 (36%), Positives = 339/614 (55%), Gaps = 79/614 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I+TF+DD +L RG+ IS+ LL  I  S I+I+
Sbjct: 15  YDVFLSFRGEDTRKTFTGHLYAALDDAGIRTFLDDNELPRGEEISEHLLKAIRESKISIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+  F   F +  + 
Sbjct: 75  VFSKGYASSRWCLNELVEILKCKRKKTGQIVLPIFYDIDPSDVRKQTGCFAEAFDKHEEC 134

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL +A +LSG++ N +    E+K I+ I  DV+ +L+  +    + LVG
Sbjct: 135 FEEKLVKEWRKALEDAGNLSGWNLNDMANGHEAKSIKAIIKDVVNKLEPKYLYVPEHLVG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++    +I   L   ++ V  + I G+ GI K T+A  VFN++   FEGS F  ++ E +
Sbjct: 195 MDPLAHDIYDFLSTATDDVRIVGIHGMSGIGKTTLAKVVFNQLCNGFEGSCFLSDINETS 254

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++ K    N   ++        R+ RK+V +V DDV         
Sbjct: 255 KQFNGLAGLQKQLLRDILKQDVANFDCVDRGKVLIKERIRRKRVLVVADDVAHPEQLNAL 314

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  VL    A++ Y+++EL   ++ +LF   A         +
Sbjct: 315 MGERSWFGPGSRVIITTRDSSVLLK--ADQTYQIEELKPYESLQLFRWHALRDTKPTEDY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+  A+ Y  G+PLAL+V+G  L G++++ W+S + KL  IP+ +I+  L+IS+D+LD
Sbjct: 373 IELSKDAVDYCGGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQGKLRISFDALD 432

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ V  +  A               +SLI ++ F +I MHD
Sbjct: 433 GEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVNGFGKITMHD 492

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGREIVR+ S   PGKR R+W+ +D + VL++  GT+ +EG++LD+ + +    ++
Sbjct: 493 LLRDMGREIVRESSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLTLDV-RASEAKSLS 551

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + +F+KM  L  L+  G        HL G   +   E+  + W QCPLK L  +   + L
Sbjct: 552 TRSFAKMKCLNLLQING-------VHLTGSFKLLSKELMWICWLQCPLKYLPSDFILDNL 604

Query: 533 VSLKMPCTKVEQLW 546
           V L    + +++LW
Sbjct: 605 VVLDTQYSNLKELW 618


>gi|351722733|ref|NP_001237766.1| functional candidate resistance protein KR1 [Glycine max]
 gi|18033111|gb|AAL56987.1|AF327903_1 functional candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 252/747 (33%), Positives = 377/747 (50%), Gaps = 98/747 (13%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAIII 61
           DVFLSFRGEDTR  FT +L+  LS + I TF+DD+ I RGD I+  L   IE S I II+
Sbjct: 17  DVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS +                      FY+VDPS VR  + SFG+  +   K+F 
Sbjct: 77  LSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFK 136

Query: 101 -----EKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                EK++ WK AL + A+LSG+    +    E + I+ I   V K+++          
Sbjct: 137 STNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKINRAPLHVADYP 196

Query: 154 VGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  I+E+++LL +GS+ V   L I G+GG+ K T+A AV+N I+ HFE   F  NVR
Sbjct: 197 VGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVR 256

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
           E  +  G++ LQ+ LLSE++ +  +  ++  ++    RL +KKV ++ DDV         
Sbjct: 257 ETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQAL 316

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L      + Y + EL    A +L    AF  + +D  +
Sbjct: 317 AGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFY 376

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            ++ ++A  YA G+PLAL+V+G  L G++ E W SA+ + + IP+ EI+E+LK+SYD+L+
Sbjct: 377 KDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALE 436

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
           + ++++FLDIAC  +     EV  I  A               KSLI + L   + +HDL
Sbjct: 437 EDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDL 496

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM-- 476
           + DMG+EIVRKES   PGKR+RLW   DI QVL++N GT  I  I ++      E+ +  
Sbjct: 497 IEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQW 556

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           +  AF KM  L+ L            H        +R LEW + P      +   EKL  
Sbjct: 557 DGDAFKKMKNLKTLIIRSGHFSKGPKHFP----KSLRVLEWWRYPSHYFPYDFQMEKLAI 612

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIR 594
             +P                  C F +     ++  K +       ++ ++LT+      
Sbjct: 613 FNLPD-----------------CGFTSRELAAMLKKKFVNLTSLNFDSCQHLTL------ 649

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CNLGL 653
            +P+ +  +  +++L   +  NL  I  S+  L KL  L    C RL+  P +   +L  
Sbjct: 650 -IPD-VSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQ 707

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL 680
           L    C SLE  P  L  M ++  ++L
Sbjct: 708 LKLGFCHSLENFPEILGKMENITELDL 734



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 41/179 (22%)

Query: 582 NLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           N+++L ++   + +   P +L   + V  L LS N N   IPE I+    LT L++++CE
Sbjct: 814 NVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGN-NFTVIPECIKECRFLTTLYLNYCE 872

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
           RL+ +  +P NL    A  C SL       SS  S+L                       
Sbjct: 873 RLREIRGIPPNLKYFYAEECLSLT------SSCRSML----------------------- 903

Query: 700 MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           +   L+E    +   Y PG +IP+WF  Q+     +   R       NK  + A C ++
Sbjct: 904 LSQELHE--AGRTFFYLPGAKIPEWFDFQTSEFPISFWFR-------NKFPAIAICHII 953


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 266/830 (32%), Positives = 402/830 (48%), Gaps = 155/830 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG DTR+NFT HL   L L+ I +FIDD+L RGDN++ +L   IE S IAII+
Sbjct: 11  FDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLT-ALFDRIEKSKIAIIV 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YA+S W                      FY+VD S V KQ +SF   F      FP
Sbjct: 70  FSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPFKLPELTFP 129

Query: 101 ----EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               E++  WK AL  A+++ G+    I   E+KL++EIA D  K+L+    S N+GLVG
Sbjct: 130 GVTPEEISSWKAALASASNILGYVVKEISTSEAKLVDEIAVDTFKKLNDLAPSGNEGLVG 189

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  ++ +E LL     + V  + I G+ GI K T+A  ++ ++   F+GS F  N+RE 
Sbjct: 190 IESRLKNLEKLLSWEDLDTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIREN 249

Query: 215 EETGGIKDLQKKLLSELSKDGNMR-----NIESQLNR-LARKKVRIVFDDVT-------- 260
               G++ L +KL S +  D ++      N   +  R L  K++ IV DDV         
Sbjct: 250 SGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYL 309

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRD ++++     +KY + +L   +A KLF   AF         
Sbjct: 310 MGHCKWYQGGSRIIITTRDSKLIETI-KGRKYVLPKLNDREALKLFSLNAFSNSFPLKEF 368

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             LT+  + YA+G PLALKVLG  LC R    WE+ + +L+   H +I EVL+ SY+ L 
Sbjct: 369 EGLTNMVLDYAKGHPLALKVLGSDLCERDDLYWEAKLDRLKSRSHGDIYEVLETSYEELT 428

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
             QKNVFLDIACF   E+ D V S+ ++              K LI L    RI MHD+L
Sbjct: 429 TEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSGVVKDLVDKCLITLS-DNRIEMHDML 487

Query: 420 RDMGREI-VRKESI------------NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
           + M +EI ++ E+I            N      RLW  +DI  +L +  GT+ I GI LD
Sbjct: 488 QTMAKEISLKVETIGIRDCRWLSRHGNQCQWHIRLWDSEDICDLLTEGLGTDKIRGIFLD 547

Query: 467 MNKVNREIHMNSYAFSKMPKLRFLRFY------GDKNKCMVSHLEGVPFA--EVRHLEWP 518
            +K+ R + +++ AF  M  L++L+ Y      G + +  +    G+ F   E+ +L W 
Sbjct: 548 TSKL-RAMRLSAKAFQGMYNLKYLKIYDSHCSRGCEAEFKLHLRRGLSFLPNELTYLHWH 606

Query: 519 QCPLKT--LNICAEKLVSLKMPCTKVEQLWDD---------------------------- 548
             PL++  L+   + LV LK+P +++E++WDD                            
Sbjct: 607 GYPLQSIPLDFDPKNLVDLKLPHSQLEEIWDDEKDVGMLKWVDLSHSINLRQCLGLANAH 666

Query: 549 ------------VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---------------- 580
                       +++LPS++   +  I   + DC  L  LP  +                
Sbjct: 667 NLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGIKTQSLQTLILSGCSSL 726

Query: 581 -------ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
                  EN+E L + GT I+ LPES+     +  L L N   L+ +   +  L  L  L
Sbjct: 727 KKFPLISENVEVLLLDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQEL 786

Query: 634 FISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLC 681
            +S C +L+  PE+  ++  L     + TS+ ++P  +  +S++   +LC
Sbjct: 787 ILSGCSQLEVFPEIKEDMESLEILLMDDTSITEMPK-MMHLSNIKTFSLC 835



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 46/319 (14%)

Query: 583  LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
            L  L +   ++ +LP+++G LS ++ L LS N N+E +PES   L+ L +  +  C+ L+
Sbjct: 857  LTDLYLSRCSLYKLPDNIGGLSSLQSLCLSGN-NIENLPESFNQLNNLKWFDLKFCKMLK 915

Query: 643  TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN----LCNFLKLDPNELSEIVKDG 698
            +LP LP NL  L A  C SLE L   L+ ++    ++      N  KL+ +  + +V   
Sbjct: 916  SLPVLPQNLQYLDAHECESLETLANPLTPLTVGERIHSMFIFSNCYKLNQDAQASLVGHA 975

Query: 699  WMKHSLYEERGIKK-----------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN 747
             +K  L      K+            + +P  EIP WF HQ +G S  +   PP     N
Sbjct: 976  RIKSQLMANASAKRYYRGFVPEPLVGICYPATEIPSWFCHQRLGRSLEIPL-PPHWCDIN 1034

Query: 748  KLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH------LYSWF-- 799
              +  A   VV F         K  ED         C +++ K          L  W   
Sbjct: 1035 -FVGLALSVVVSF---------KDYEDSAKRFSVKCCGNFENKDSSFTRFDFTLAGWNEP 1084

Query: 800  LGKISY----VESDHVFLGCNS------FGGEYFGPNYDEFSFRIHCS-FHFPPYLERGE 848
             G +S+    + SDHVF+G NS        GE     Y + SF  + +       +E  E
Sbjct: 1085 CGSLSHESRKLTSDHVFMGYNSCFLVKNVHGESNSCCYTKASFEFYVTDDETRKKIETCE 1144

Query: 849  VKKCGIHFVYAQDSADHIL 867
            V KCG+  +Y  +  D +L
Sbjct: 1145 VIKCGMSLMYVPEDDDCML 1163


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 261/749 (34%), Positives = 391/749 (52%), Gaps = 89/749 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  +ASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNFASSTWCLLELSKILECMEERGRILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
              +K++ W++ALT+ A L+G+ S   R E++LI EI   +  +L  +      ++ L G
Sbjct: 139 VGNKKVEGWRDALTKVAGLAGWTSKDYRYETELIREIVQALWSKLHPSLTVFGSSEKLFG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EEI+ LL   +  V  + IWG+GGI K T+A  V+ KIS  FE   F  NVRE  
Sbjct: 199 MDSKLEEIDVLLDKEANEVRFIGIWGMGGIGKTTLARLVYQKISHQFEVCIFLDNVREVS 258

Query: 216 ETG-GIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
           +T  G+ DLQKK+LS++ K+ N++  ++ S +  + R    K V +V DD+         
Sbjct: 259 KTTHGLVDLQKKILSQIFKEENVQVLDVYSGMTMIKRCVCNKAVLLVLDDMDQSEQLENL 318

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTRD+ VL      K Y +  L   +A +LF   AF     +   
Sbjct: 319 VGEKDCFGLRSRIIITTRDRHVLVTHGVEKPYELNGLNKNEALQLFSWKAFRKCEPEEDF 378

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL    + YA G+PLALK+LG +L GR+ + W SA+ KL+  P + + ++LK+S+D LD
Sbjct: 379 AELCKSFVTYAGGLPLALKILGSFLKGRTPDEWNSALAKLQQTPDITVFKILKMSFDGLD 438

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF     ++ +I + D+S             KSL+ +    ++ +HDL+
Sbjct: 439 EMEKKIFLDIACFRWLYRKEFMIELVDSSDPCNRITRSVLAEKSLLTISSDNQVHVHDLI 498

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            +MG EIVR+E+   PG R+RL    DI+ V  KNTGTEAIEGI LD+ ++  E   N  
Sbjct: 499 HEMGCEIVRQEN-KEPGGRSRLCLRDDIFHVFTKNTGTEAIEGILLDLAEL-EEADWNLE 556

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKM 537
           AFSKM KL+ L  +  +       L       +R L W   P K+L  C   ++L  + +
Sbjct: 557 AFSKMCKLKLLYIHNLRLSVGPRLLPN----SLRFLSWSWYPSKSLPPCFQPDELAEISL 612

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM---LERLPD--ELENLEYLTVKG-T 591
             + ++ LW+ ++ L          +  + ID      L R PD   + NLE L ++G T
Sbjct: 613 VHSNIDHLWNGIKYL----------VNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCT 662

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            + ++  S+  L  ++   L N  ++  +P  + ++  L    +S C +L+ + E    +
Sbjct: 663 NLVKIHPSIALLKRLRIWNLRNCKSIRSLPSEV-NMEFLETFDVSGCSKLKMISEFVMQM 721

Query: 652 GLLSA--RNCTSLEKLPAGLSSMSSVLYV 678
             LS      T++EKLP+ +  +S  L V
Sbjct: 722 KRLSKLYLGGTAVEKLPSSIEHLSESLVV 750



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 128/286 (44%), Gaps = 37/286 (12%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-----C 649
            E+P  +G LS ++RL L  N N   +P SI  L  +    + +C+RLQ LPELP     C
Sbjct: 814  EIPNDIGSLSSLQRLELRGN-NFVSLPASIHLLEDVD---VENCKRLQQLPELPDLPNLC 869

Query: 650  NLGL---LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE 706
             L     L+  NC S+     G    S  LY  L  +++++     +++       S   
Sbjct: 870  RLRANFWLNCINCLSM----VGNQDASYFLYSVLKRWIEIEALSRCDMMIRQETHCSFEY 925

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKY 766
             R +      PG+EIP+WF +QS+G + T K   P  A  +K I FA CA++V       
Sbjct: 926  FRFV-----IPGSEIPEWFNNQSVGDTVTEKL--PWDACNSKWIGFAVCALIVPHDNPSA 978

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLG--KISYVESDHVFLGCNSFGGEYFG 824
               KS  D         CC W   ++  +    +G   +  + SDH++L        +  
Sbjct: 979  VPEKSHLDP------DTCCIWCFWNDYGIDVIGVGTNNVKQIVSDHLYLLV--LPSPFRK 1030

Query: 825  P-NYDEFSFRIHCSFHFPPYLERG-EVKKCGIHFVYAQDSADHILK 868
            P NY E +F    +        RG +VKKCG+  +Y  D+ + I K
Sbjct: 1031 PENYLEVNFVFKIARAVGS--NRGMKVKKCGVRALYEHDTEELISK 1074


>gi|359477821|ref|XP_003632029.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1510

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 287/907 (31%), Positives = 432/907 (47%), Gaps = 174/907 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD+ L +G +I+  LL  IE S   II
Sbjct: 20  YDVFLSFRGGDTRKNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           IFS+ YA SRW                      FY VDPS VR Q  SFG     H    
Sbjct: 80  IFSKNYAYSRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   E +++W+ AL EAA+LSG   N  + E+++++EI + +++RL+    S  K +VG
Sbjct: 140 NQEKKEMIQKWRIALREAANLSGCHVND-QYETEVVKEIVDTIIRRLNHQPLSVGKSIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++SL+      V  + I+GIGG+ K TIA A++N+IS  ++GS F +N++E  
Sbjct: 199 IGVHLEKLKSLMNTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKERS 258

Query: 216 ETGGIKDLQKKLL-----SELSKDGNMRNIESQLNRLAR-KKVRIVFDDVT--------- 260
           + G I  LQ++LL      +  K  N+    S + R  R  +V ++FDDV          
Sbjct: 259 K-GDILQLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVDELKQLEYLA 317

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDK VL     +  Y + +L   +A +LF  WAF  +     + 
Sbjct: 318 EEKDWFHAKSTIIITSRDKHVLAQYGVDIPYEVSKLNKEEAIELFSLWAFKQNRPQEVYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKVLG  L G+    WESA+ KL+IIPH+EI  VL+IS+D LDD
Sbjct: 378 NLSYNIIDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIHNVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--ASKSLINLDLFYRIR-------MHDLLRDMGR 424
            +K +FLDIACF +G+ RD V  I    A  ++  LD    I        MHDL++ MG 
Sbjct: 438 IEKGIFLDIACFFKGDDRDFVSRILGPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGW 497

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EI+R+E    PG+R+RLW       +++    TE                     +F +M
Sbjct: 498 EIIRQECPEDPGRRSRLWDSNANDVLIRNKITTE---------------------SFKEM 536

Query: 485 PKLRFLRFYGDKNKCMV--SHL-EGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKM 537
            +LR L  +  +   +    HL     F+  E+ +L W   PL++L  N  A+ LV L +
Sbjct: 537 NRLRLLNIHNPREDQLFLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVL 596

Query: 538 PCTKVEQLW-----------------------DDVQRLPSSL------CTFKTPITFEII 568
             + ++Q+W                        D   +P+        CT    +  E++
Sbjct: 597 RGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCTMHGCVNLELL 656

Query: 569 ----------------DCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRL 609
                            C  LER P+    +  L  L + GT I +LP S+  L+ ++ L
Sbjct: 657 PRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTL 716

Query: 610 ILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCT--SLEKLP 666
           +L   S L +IP  I HLS L  L + HC  ++  +P   C+L  L   N        +P
Sbjct: 717 LLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIP 776

Query: 667 AGLSSMSSVLYVNL--CNFLK-----------LDPN------------ELSEIVK----- 696
             ++ +SS+  +NL  CN L+           LD +             L  +V      
Sbjct: 777 TTINQLSSLEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPLHSLVNCFRWA 836

Query: 697 DGWMKHSLYEE---RGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
             W KH+ + +    G    +  PG++ IP+W  ++    S+ ++  P      N+ + F
Sbjct: 837 QDW-KHTSFRDSSYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIEL-PQNWHQNNEFLGF 894

Query: 753 AFCAVVV 759
           A C V V
Sbjct: 895 AICCVYV 901



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+  T     C  LE +P+   ++E+L  L++ GT I+E+P S+ RL 
Sbjct: 1107 NLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLR 1166

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L+LSN  NL  +PESI +L+ L FL +  C   + LP+   NLG L      SL  
Sbjct: 1167 GLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPD---NLGRLQ-----SLLH 1218

Query: 665  LPAG-LSSMSSVL--YVNLCNF--LKLDPNELSEIVKDGWMKHSLYEE-RGIKKSMYFPG 718
            L  G L SM+  L     LC+   L+L    + EI  +     SL  E R   ++ +   
Sbjct: 1219 LSVGPLDSMNFQLPSLSGLCSLRQLELQACNIREIPSEICYLSSLGREFRRSVRTFFAES 1278

Query: 719  NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            N IP+W  HQ  G   T+K  P      +  + F  C++ V
Sbjct: 1279 NGIPEWISHQKSGFKITMKL-PWSWYENDDFLGFVLCSLYV 1318


>gi|297805932|ref|XP_002870850.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316686|gb|EFH47109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 271/908 (29%), Positives = 424/908 (46%), Gaps = 181/908 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R NF +H+      K I  FID+ + R  +I   L+  I+ S IAI++
Sbjct: 62  HDVFPSFHGADVRKNFLAHILKEFKGKGIVPFIDNDIERSKSIGPELIEAIKGSKIAIVL 121

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS W                      FY VDP+ V+KQ+  FG+ F +  K + 
Sbjct: 122 LSRNYASSSWCLNELVEIMNCREELGQTVMTIFYDVDPTDVKKQTGDFGKVFKKTCKGKT 181

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E +KRW+N L   A ++G  S     E+ + E+IA DV   L+    S++  G +G+  
Sbjct: 182 KEDIKRWQNVLEAVATIAGEHSCNWDNEAAMTEKIATDVSNMLNRYSPSRDFDGFIGMGA 241

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            + E+ESLLC+ S+ V  + IWG  GI K TIA  ++++ S +FE S F  N++E     
Sbjct: 242 HMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYTR 301

Query: 214 ---AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
              ++E      LQ++ LS++   KD  + ++    +RL  K+V IV D +         
Sbjct: 302 PVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAI 361

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITT+D+++LK    N  Y+++     +A+++FC +AFG +      
Sbjct: 362 AKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGF 421

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL  +  K    +PL L+V+G +  G S+  W +A+ +L+I     I+ +LK SYD+L 
Sbjct: 422 EELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILKFSYDALC 481

Query: 373 DSQKNVFLDIACFL--EGEHRDEV-ISIFD--------ASKSLINLDLF----YRIRMHD 417
           D  K++FL IAC    +G  +D + +S  D        A KSLI L++F      I+MH+
Sbjct: 482 DEDKDLFLHIACLFNNDGMVKDYLALSFLDVRQGLHLLAEKSLIALEIFSADYTHIKMHN 541

Query: 418 LLRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           LL  +GR+IVR     +SI  PGKR  L   +DI +VL  NTG+  + GI  ++  ++ E
Sbjct: 542 LLVQLGRDIVRHKPGHQSICAPGKRQFLVDARDICEVLTDNTGSRNVIGILFEVYTLSGE 601

Query: 474 IHMNSYAFSKMPKLRFLRFY----GDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--N 526
           ++++  AF  M  L+FLRF+    G  +K  +   L  +P  ++R LEW   P+K L  N
Sbjct: 602 LNISERAFEGMSNLKFLRFHGPYDGQSDKLYLPQGLNNLP-RKLRILEWSHFPMKCLPSN 660

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQ------------------------------------ 550
            C + LV L M  +K++ LW   Q                                    
Sbjct: 661 FCTKYLVQLCMGYSKLQNLWQGNQVSKRSDLPVLGNLKRMDLWESKHLKELPDLSTATNL 720

Query: 551 ------------RLPSSLCTFKTPITFEIIDCKMLERLPDELE----------------- 581
                        LPSSL   +      +  C  LE LP  +                  
Sbjct: 721 EKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPTNINLESLDDLDLADCLLIKS 780

Query: 582 ------NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF--- 632
                 N++ L +  T I+E+P ++   S ++ L +S N NL+  P ++  ++KL F   
Sbjct: 781 FPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHALDIITKLYFNDT 840

Query: 633 ------LFISHCERLQTL-----------PELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
                 L++    RLQTL           P+L  +L  ++A NC SLE+L     +   +
Sbjct: 841 EIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERLDFSFHNHPKI 900

Query: 676 LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSAT 735
           L +   N  KL+ NE  E ++                  + PG E+P  F +++ GSS  
Sbjct: 901 L-LWFINCFKLN-NEAREFIQTSC------------TFAFLPGREVPANFTYRANGSSIM 946

Query: 736 LKTRPPRP 743
           +     RP
Sbjct: 947 VNLNQRRP 954


>gi|357499329|ref|XP_003619953.1| Resistance protein [Medicago truncatula]
 gi|355494968|gb|AES76171.1| Resistance protein [Medicago truncatula]
          Length = 1196

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 253/761 (33%), Positives = 391/761 (51%), Gaps = 107/761 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFL+FRG DTRD FT HL+  L+ K I TFIDD  L RGD I+ SL+  IE S I I 
Sbjct: 20  YQVFLNFRGSDTRDGFTGHLYKALTDKGIHTFIDDCDLKRGDEITPSLIKAIEESRIFIP 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS++                      FY VDP+ +R QS S+G H ++  + F
Sbjct: 80  VFSINYASSKFCLDELVHIIHCYKTKGRLVLPVFYGVDPTQIRHQSGSYGEHLTKHEESF 139

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++ +WK ALT+AA+LSG+  +    E K I +I  D+  +++       K  
Sbjct: 140 QNNKKNKERLHQWKLALTQAANLSGYHYSP-GYEYKFIGKIVEDISNKINRVILHVAKYP 198

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  +E+++ LL   S EGV  + ++G GG+ K T+A A++N ++  FEG  F  NVR
Sbjct: 199 VGLESRLEQVKLLLDKESDEGVHMVGLYGTGGLGKSTLAKAIYNFVADQFEGVCFLHNVR 258

Query: 213 EAEETGGIKDLQKKLLSELSKD----GNM-RNIESQLNRLARKKVRIVFDDVTS------ 261
           E      +K LQK+LLS+  K     G++   I     RL RKK+ ++ DDV        
Sbjct: 259 ENSAHNNLKHLQKELLSKTVKVNIKFGHICEGIPIIKERLCRKKILLILDDVNQLDQLEA 318

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L      + Y ++ L   +A +L    AF  + +  S
Sbjct: 319 LAGGLDWFGPGSRVIITTRDKHLLTCHGIERTYAVRGLYGTEALELLRWMAFKNNKVPPS 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++ ++A+ YA G+PL L+++G  L G+S E W+  +   E IP+ +I E+LK+SYD+L
Sbjct: 379 YEDVLNRAVSYASGLPLVLEIVGSNLYGKSIEEWKGTLDGYEKIPNKKIHEILKVSYDAL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHD 417
           ++ Q++VFLDIAC  +G   +E   I                A KSLI  +  Y +R+HD
Sbjct: 439 EEEQQSVFLDIACCFKGCRWEEFEDILRYHYGHCITHHLGVLAEKSLIYQNHGY-LRLHD 497

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++DMG+E+VR+ES   PG+++RLW   +I  VLK+NTGT  IE I ++ + +   I   
Sbjct: 498 LIKDMGKEVVRQESRKEPGEQSRLWCQDEIVHVLKENTGTSKIEMIYMNFHSMESVIDQK 557

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKM 537
             AF KM KL+ L     +N      L+ +P + +R L+W  C  ++             
Sbjct: 558 GKAFKKMTKLKTLII---ENGHFSKGLKYLP-SSLRVLKWKGCLSES------------- 600

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GTTIR 594
                                F+      +  C+ L  +PD  +L+NLE  +      + 
Sbjct: 601 ------------LSSSILSKKFQNMKVLTLNCCEYLTHIPDVSDLQNLEKFSFMFCKNLI 648

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL--- 651
            + +S+G L+ ++ L     S L+R P     L+ L  L +S CE L+  PEL C +   
Sbjct: 649 TIDDSIGHLNKLESLDAGCCSKLKRFPP--LGLTSLKQLELSGCESLKNFPELLCKMRNI 706

Query: 652 -GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL-DPNE 690
             +  +R  TS+ +LP+   ++S +  +++    +   PN+
Sbjct: 707 KHIFLSR--TSIGELPSSFHNLSELRSLHIFGMFRFPKPND 745


>gi|6721163|gb|AAF26791.1|AC016829_15 putative disease resistance protein [Arabidopsis thaliana]
          Length = 896

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 250/825 (30%), Positives = 401/825 (48%), Gaps = 140/825 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED R +F SH+      + I  F+D+ + RG++I   L+  I  S IAII+
Sbjct: 63  YDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNNIKRGESIGPELIRAIRGSKIAIIL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
            S+ YASS W                      FY+VDPS V+K +  FG+ F +  + + 
Sbjct: 123 LSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYKVDPSLVKKLTGDFGKVFRNTCKGKE 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ A  + A ++G+DS     ES +IE+I +D+ + L+ +  S++   L+G+  
Sbjct: 183 RENIERWREAFKKVATIAGYDSRKWDNESGMIEKIVSDISEMLNHSTPSRDFDDLIGMGD 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E+++ LL I S+ +  + IWG  G+ K TIA +++N+ S  F+ S F  +++ A    
Sbjct: 243 HMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTIP 302

Query: 219 GIKD-------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS-------- 261
              D       LQ++ LS+++   N++  ++     RL  KKV +V DDV          
Sbjct: 303 ACSDDYYEKLQLQQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDALA 362

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+D+ +L+       Y +    Y +A ++FC  AFG         
Sbjct: 363 KENDWLGPGSRIIITTQDRGILRAHGIEHIYEVDYPNYEEALQIFCMHAFGQKSPYDGFE 422

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL  +    +  +PL LKV+G Y  G +K+ W  A+ ++      +IE +LK+SYD+L D
Sbjct: 423 ELAQQVTTLSGRLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIESILKLSYDALCD 482

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
             K++FL +AC    +  + V                  A KSLI++DL   IRMH LL 
Sbjct: 483 VDKSLFLHLACSFHNDDTELVEQQLGKKFSDLRQGLHVLAEKSLIHMDLRL-IRMHVLLA 541

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +GREIVRK+SI+ PG+R  L    DI +VL  +TG+ ++ GI  D N + +E+ ++  A
Sbjct: 542 QLGREIVRKQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKELDISEKA 601

Query: 481 FSKMPKLRFLRFYGD-------------KNKCMVSHLEGVPF--------AEVRHLEWPQ 519
           F  M  L+F+R YGD              ++  + +   + F         ++R L W Q
Sbjct: 602 FRGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRGLDYLPGKLRLLHWQQ 661

Query: 520 CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ--------------------------- 550
            P+ +L     AE LV L MP +K+E+LW+ +Q                           
Sbjct: 662 FPMTSLPSEFHAEFLVKLCMPYSKLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATN 721

Query: 551 -------------RLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTI 593
                        +LPSS+          + +C  L  LP     L NL+ L ++  +++
Sbjct: 722 LQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSL 781

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCN 650
            ELP S G L+ V+ L     S+L ++P +  +L+ L  L +  C  +  LP       N
Sbjct: 782 VELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTN 841

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
           L +L+ R C++L +LP+         +VNL N   LD  + S ++
Sbjct: 842 LQVLNLRKCSTLVELPSS--------FVNLTNLENLDLRDCSSLL 878


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 263/785 (33%), Positives = 402/785 (51%), Gaps = 114/785 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR+NFTSHL   L  K +  FIDD+L RG  IS+SLL +I+ S I+III
Sbjct: 23  YDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLERGGQISESLLKSIDGSKISIII 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRKR 98
           FS+ YASS W                      FY+VDPS VRKQ+  FG   ++    + 
Sbjct: 83  FSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDPSEVRKQTGGFGEALAKHEANEL 142

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT-FQSKNKGLVGVE 157
              K++ WK ALT AA LSG+D    + E+ LI ++  +VL  L+ T      K  VG++
Sbjct: 143 MTNKVQPWKEALTTAASLSGWDLATRKNEADLIHDLVKEVLSILNQTQLLHVAKHPVGID 202

Query: 158 CSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
             +  +E L      +GV  + I G+GGI K T+A A++NKI+  FE   F  NVRE  E
Sbjct: 203 SQLRAVEELASHDVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETLE 262

Query: 216 ETGGIKDLQKKLLSELSKD-----GNMRNIESQL-NRLARKKVRIVFDDVTS-------- 261
           +   +  LQ+KLLSE+ KD     GN+   ++ + +RL  KKV I+ DDV          
Sbjct: 263 QFKDLVQLQEKLLSEILKDNAWKVGNVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDALV 322

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS++I TTRD+ +L+N   +  Y ++ L    + +LF   AF  +H  ++++
Sbjct: 323 GERDWFGRGSKIIATTRDRHLLENHSFDIVYPIQLLDPKKSLELFSLHAFKQNHPSSNYV 382

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+  A+ Y +G+PLAL +LG  L  R +++W+S + +LE      +E V +I +  L +
Sbjct: 383 DLSKFAVSYCKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEAVFQIGFKELHE 442

Query: 374 SQKNVFLDIACFLEGE---HRDEVISIFDASKS-----LINLDLFY----RIRMHDLLRD 421
             K +FLDI+CF  GE   +  +V+   D +       L++L L      +I+MHDL++ 
Sbjct: 443 RVKEIFLDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHDLIQQ 502

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+ IVR ES   P KR+RLW  +   ++LK+ +GT+A++ I LD++       + + AF
Sbjct: 503 MGQTIVRHESF-EPAKRSRLWEAEGAIKILKEKSGTKAVKAIKLDLHYKPWLKIVEAEAF 561

Query: 482 SKMPKLRFLRF----YGDKNKCMVSHLEGVPFAEVRHLEWP-----QCPLKTLNICAEKL 532
             M  LR L      Y  KN       E +P   ++ +EW      Q    + ++   +L
Sbjct: 562 RNMKNLRLLILQRVAYFPKNI-----FEYLP-NSLKWIEWSTFYVNQSSSISFSVKG-RL 614

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L M     +Q      R+    C  KT    ++  C  L+  P+     NLE L ++G
Sbjct: 615 VGLVMKGVVNKQ-----PRIAFENC--KTMKHVDLSYCGTLKETPNFSATLNLEKLYLRG 667

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
            T+++ + ES+  LS +  L L    NLE+ P S   L  L  L +S C +++ +P+L  
Sbjct: 668 CTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSA 727

Query: 650 N---------------------------LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           +                           L +L    C +LE+LP   + + S+  +NL +
Sbjct: 728 SSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLESLELLNLAS 787

Query: 683 FLKLD 687
            LKL+
Sbjct: 788 CLKLE 792



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 524 TLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL 583
           +L I  E + SL    T    L  ++++LPSSL   K+  +    +C  LE+LP+  EN+
Sbjct: 844 SLRIIHESIGSLDKLITLQLDLCHNLEKLPSSL-KLKSLDSLSFTNCYKLEQLPEFDENM 902

Query: 584 EYLTV---KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           + L V    GT IR LP S+G L  ++ L L++ +NL  +P  I  L  L  L +  C +
Sbjct: 903 KSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSK 962

Query: 641 LQTLP 645
           L   P
Sbjct: 963 LDMFP 967



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 15/178 (8%)

Query: 524 TLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELE 581
           +L +  E + SL    T   +  D++++ PSS    K+     +  C+ +E +PD     
Sbjct: 670 SLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASS 729

Query: 582 NLEYLTVKGTT-IRELPESLGR-LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           NL+ L ++    +R + +S+GR L  +  L L    NLER+P     L  L  L ++ C 
Sbjct: 730 NLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLESLELLNLASCL 789

Query: 640 RLQT-----LPELPC-----NLGLLSARNCTSLEKLPA-GLSSMSSVLYVNLCNFLKL 686
           +L+T       + P      +L +L+ R+C +LE++    ++S   +L +N C  L++
Sbjct: 790 KLETFFDSSFRKFPSHLKFKSLKVLNLRDCLNLEEITDFSMASNLEILDLNTCFSLRI 847



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 31/167 (18%)

Query: 522 LKTLNICAEKLVSLKM----PCTKVEQLWDD-VQRLPSSLCTFKTPITFEIIDCKMLERL 576
           L+ L I   KL SL++     C K+E  +D   ++ PS L  FK+     + DC  LE +
Sbjct: 767 LERLPIYTNKLESLELLNLASCLKLETFFDSSFRKFPSHL-KFKSLKVLNLRDCLNLEEI 825

Query: 577 PD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
            D     NLE L +    ++R + ES+G L  +  L L    NLE++P S++  S     
Sbjct: 826 TDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKLPSSLKLKS----- 880

Query: 634 FISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
                            L  LS  NC  LE+LP    +M S+  +NL
Sbjct: 881 -----------------LDSLSFTNCYKLEQLPEFDENMKSLRVMNL 910


>gi|163914239|dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 267/787 (33%), Positives = 394/787 (50%), Gaps = 159/787 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL   L    I TF DD+ L  G +IS  LL  IE S +A++
Sbjct: 18  YKVFLSFRGEDTRKTFTGHLFKGLENNGIFTFQDDKRLEHGASISDELLKAIEQSQVALV 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA+SRW                      FY VDPSHVR Q  SF   F +   R+
Sbjct: 78  VFSKNYATSRWCLDELVKIMECKDQCGQTVIPVFYDVDPSHVRNQRESFTEAFDKHEPRY 137

Query: 100 PE------KMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNK 151
            +      K++RW+NALT AA+L G+D   +R   E++ I++I + + K  ++   S  +
Sbjct: 138 RDDDEGRRKLQRWRNALTAAANLKGYD---VRDGIEAENIQQIVDQISKLCNSATLSSLR 194

Query: 152 GLVGVECSIEEIESLLCIGSEGV-CKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
            +VG++  +++++SLL +G   V   L IWG+GG+ K TIA  +F+ +S  FE + F  +
Sbjct: 195 DVVGIDTHLDKLKSLLKVGINDVRIILGIWGMGGLGKTTIARVIFDILSHQFEAACFLAD 254

Query: 211 VREAEETGGIKDLQKKLLSELS--KDGNMRNIESQ----LNRLARKKVRIVFDDVT---- 260
           ++E E+   +  LQ  LLSELS  KD  + N         +RL  KKV IV DD+     
Sbjct: 255 IKENEKRHQLHSLQNTLLSELSRRKDDYVNNKHDGKRMIPDRLFSKKVLIVLDDIDHKDH 314

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GSRV++TTR+K +++    +  Y M  L   ++ +LFCQ AF  +  
Sbjct: 315 LEYLAGDIGWFGNGSRVVVTTRNKHLIEK--NDVIYEMTALSDHESIQLFCQHAFRKEDP 372

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D    +L+ + +KYA G+PLALKV G  L       W+SA+ +++I  + EI + LKISY
Sbjct: 373 DEHFKKLSLEVVKYANGLPLALKVWGSLLHNLGLTEWKSAIEQMKINSNSEIVDKLKISY 432

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYR-IR 414
           D L+  Q+ +FLDIACFL GE +  ++ I ++              KSL+ +   Y+ I+
Sbjct: 433 DGLEPIQQEMFLDIACFLRGEQKAYILQILESCHIGAEYGLRILIDKSLVFITEDYQIIQ 492

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGI---SLDMNKVN 471
           MHDL++DMG+ IV  +   +PG+R+RLW ++D  +V+  N GT A+E I    LD  + N
Sbjct: 493 MHDLIQDMGKYIVNLQK--NPGERSRLWLNEDFEEVMTNNAGTVAVEAIWVHDLDTLRFN 550

Query: 472 REIHMNSYAFSKMPKLRFLR------------------------FYGDKNKC-------- 499
            E      A   M KLR L                         F  D   C        
Sbjct: 551 NE------AMKNMKKLRILYIDREVYDFNISDEPIEYLSNNLRWFNVDGYPCESLPSTFE 604

Query: 500 --MVSHLEGVPFAEVRHL--EWPQCP-LKTLNICAEKLVSLKMPCTKVEQL-------WD 547
             M+ HLE + F+ +R+L  E    P L+T+N+   + +      T +  L         
Sbjct: 605 PKMLVHLE-LSFSSLRYLWMETKHLPSLRTINLTGSESLMRTPDFTGMPNLEYLDMSFCF 663

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLP-DELENLEYLTVKGTT-------------- 592
           +++ +  SL      I  ++ DCK L+R P   +E+LEYL + G +              
Sbjct: 664 NLEEVHHSLGCCSKLIGLDLTDCKSLKRFPCVNVESLEYLDLPGCSSLEKFPEIRGRMKL 723

Query: 593 ---------IRELPES----LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                    IRELP S      R++W   L LS+  NL   P SI  L  L  LF+S C 
Sbjct: 724 EIQIHMRSGIRELPSSSFHYQTRITW---LDLSDMENLVVFPSSICRLISLVQLFVSGCS 780

Query: 640 RLQTLPE 646
           +L++LPE
Sbjct: 781 KLESLPE 787



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 96/272 (35%), Gaps = 73/272 (26%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRE------------- 595
             PSS+C   + +   +  C  LE LP+E   L+NLE L    T I               
Sbjct: 761  FPSSICRLISLVQLFVSGCSKLESLPEEIGDLDNLEVLYASDTLISRPPSSIVRLNKLNS 820

Query: 596  ---------------------------------------LPESLGRLSWVKRLILSNNSN 616
                                                   LPE +G LS +K L L  N N
Sbjct: 821  LSFRCSGDNGVHFEFPPVAEGLLSLKNLDLSYCNLIDGGLPEDIGSLSSLKELDLRGN-N 879

Query: 617  LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE---KLPAGLSSMS 673
             E +P SI  L  L  L +S C+ L  LPEL   L  L      +L+    L      + 
Sbjct: 880  FEHLPRSIAQLGALRSLGLSFCQTLIQLPELSHELNELHVDCHMALKFINDLVTKRKKLQ 939

Query: 674  SVLYVNLCNFLKLDP----------NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPK 723
             V++  L +    D             +S +  D  +  SL+E      +++    +IP 
Sbjct: 940  RVVFPPLYDDAHNDSIYNLFAHALFQNISSLRHDISVSDSLFENVF---TIWHYWKKIPS 996

Query: 724  WFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
            WF H+   SS ++   P      +K + FA C
Sbjct: 997  WFHHKGTDSSVSVDL-PENWYIPDKFLGFAVC 1027


>gi|105923235|gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 276/877 (31%), Positives = 424/877 (48%), Gaps = 184/877 (20%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
            YDVFLSFRGEDTR  FT HL+  L    I TF D D+L RG++IS  +   I+ S IAI+
Sbjct: 203  YDVFLSFRGEDTRKKFTDHLYTALIHAGIHTFRDNDELPRGEDISSIISRPIQESRIAIV 262

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS+ YASS W                      FY +DPS VRKQ+ SF   F R  +RF
Sbjct: 263  VFSKGYASSTWCLGELSEILACKSAIGQLAVPIFYDIDPSDVRKQTASFAEAFKRHEERF 322

Query: 100  PEKMK---RWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
             E ++   +W+  L EAA+LSG+    +    E+K IE++  DVL +L+  + +     V
Sbjct: 323  KENIEMVNKWRKVLVEAANLSGWHLQEMENGHEAKFIEKMVEDVLHKLNCKYLTVASYPV 382

Query: 155  GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
            G++  ++++ S+L + ++ V  + I+G+GGI K TIA AVFN++   FEGS   LN++E 
Sbjct: 383  GIDSRVKDVVSMLSVYTDDVRTVGIYGMGGIGKTTIAKAVFNELCNEFEGSCCLLNIKEI 442

Query: 214  AEETGGIKDLQKKLLSEL--SKDGNMRNIE--SQL--NRLARKKVRIVFDDVTS------ 261
            +E+  G+  LQ++L+S+L  SK   + N++  S L   RL  K+V +V DD+        
Sbjct: 443  SEQPSGLVQLQEQLISDLIQSKTFKINNVDRGSALIKERLCHKRVLVVLDDLDQLKQLGA 502

Query: 262  ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSRVIITTRD+ +L     + KY ++EL + ++ +LF   AF  +     
Sbjct: 503  LMGERNWFGLGSRVIITTRDEHLLTQLQVHNKYLVEELNHDESLQLFIAHAFKENRPTEE 562

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             + ++   ++Y  G+PLAL+VLG YLC RS   W SA +             L+IS+++L
Sbjct: 563  FLGISKGVVQYVGGLPLALEVLGSYLCKRSIGEWRSARK-------------LQISFNAL 609

Query: 372  DDSQ-KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
            DD   K +FLDI CF  G   D V  + D               +SLI  + + ++RMHD
Sbjct: 610  DDDDIKGIFLDITCFFIGMDVDYVSKLLDGCGFHSRIGIEVLMQRSLITTNWYNKLRMHD 669

Query: 418  LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
            LLRDMGREI+R+ S +HPGKR RL   KD+   L+K      ++ ++L  +     +H++
Sbjct: 670  LLRDMGREIIREMSPDHPGKRRRLCFQKDVLDALRKKMFLNRLKILNLSYS-----VHLS 724

Query: 478  SYA-FSKMPKLRFLRFYGDKNKCMV----SHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            +   F  +P L  +   G  +   V     HL+ +    +   +     LK L  +IC  
Sbjct: 725  TPPHFMGLPCLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCK----SLKNLPESICYL 780

Query: 531  K-LVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEY 585
            K L SL +  C  +E+L D +  + +        +T  + D   +ERLP     L+NL  
Sbjct: 781  KCLESLNISRCINLEKLPDQLGDMEA--------LTMLLADGTAIERLPSSIGHLKNLSN 832

Query: 586  LTVKG-----------------------------------TTIRELPES---------LG 601
            L++ G                                    ++R L  S         LG
Sbjct: 833  LSLGGFKYDLSSVSWFSHILPWLSPRISNPRALLPTFTGLNSLRRLDLSYCGLSDGTDLG 892

Query: 602  RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
             LS ++ L  + N  L  +P  I  L +L  L + HC  L ++ +LP  L  L   +CTS
Sbjct: 893  GLSSLQELNFTRN-KLNNLPNGIDRLPELQVLCLYHCADLLSISDLPSTLHSLMVYHCTS 951

Query: 662  LEKLP--------------------AGLSSMSS--VLYVNLCNFLKLDPNELSEIVKDGW 699
            +E+L                      GL S+ +  ++YV+ C+ L    N    +++  +
Sbjct: 952  IERLSIHSKNVPDMYLVNCQQLSDIQGLGSVGNKPLIYVDNCSKLA---NNFKSLLQASF 1008

Query: 700  MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
                    +G    +    +EIP WF H+  GSS + 
Sbjct: 1009 --------KGEHLDICLRDSEIPDWFSHRGDGSSISF 1037


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 262/744 (35%), Positives = 386/744 (51%), Gaps = 83/744 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I++F DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGYLYHELQRRGIRSFRDDPQLERGTTISPKLLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           E  K    W++ALT+ A L+G+ S   R E++LI EI   +  ++  +      ++ LVG
Sbjct: 139 EGNKEVEGWRDALTKVASLAGWTSEKYRYETELIREIVQALWSKVHPSLTVFGSSEKLVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EEI+ LL   +  V  + IWG+GGI K T+   V+ KIS  FE   F  NVREA 
Sbjct: 199 MDAKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLGRLVYEKISHQFEVCIFLANVREAS 258

Query: 216 ETG-GIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
           +T  G+ DLQK++LS++ K+ N++  N+ S +  + R    K V +V DDV         
Sbjct: 259 KTTHGLVDLQKQILSQILKEENVQVWNVYSGITMIKRCVCNKAVLLVLDDVDQSEQLAIL 318

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTR++ VL      K Y +K L   +A +LF   AF     +  +
Sbjct: 319 VGEKDCFGLRSRIIITTRNRHVLVTHGVEKPYELKGLNEDEALQLFSWKAFTKCEPEEDY 378

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL  + +  A G+PLALK+LG +L  RS + W SA +KL+  P+  + E+LKIS+D LD
Sbjct: 379 AELCKRFVTCAAGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEILKISFDGLD 438

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF      + +I + D+S             KSL+ +    ++ +HDL+
Sbjct: 439 EMEKKIFLDIACFRRLYRNEFMIELVDSSDPCNRITRSVLAEKSLLTISSDNQVDVHDLI 498

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            +MG EIVR+E+   PG R+RL     I+ V  KNTGTEAIEGI L ++K+  E   N  
Sbjct: 499 HEMGCEIVRQEN-KEPGGRSRLCLRDHIFHVFTKNTGTEAIEGILLHLDKL-EEADWNLE 556

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKM 537
            FSKM KL+ L  +  +       L       +R L W   P K+L  C   ++L  L +
Sbjct: 557 TFSKMCKLKLLYIHNLRLSVGPKFLPNA----LRFLNWSWYPSKSLPPCFQPDELTELSL 612

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIR 594
             + ++ LW+  + L       +   + ++     L R PD     NLE L ++G T + 
Sbjct: 613 VHSNIDHLWNGKKYL-------RNLKSIDLSYSINLTRTPDFTVFPNLEKLVLEGCTNLV 665

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++  S+  L  +K     N  +++ +P  + ++  L    IS C +L+ +PE       L
Sbjct: 666 KIHPSIALLKRLKLCNFRNCKSIKSLPSEL-NMEFLETFDISGCSKLKKIPEFVGQTKRL 724

Query: 655 S--ARNCTSLEKLPAGLSSMSSVL 676
           S      T++EKLP+ +  +S  L
Sbjct: 725 SKLCLGGTAVEKLPSSIEHLSESL 748



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 122/285 (42%), Gaps = 46/285 (16%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-NLGL 653
            E+P  +G LS +++L L  N N   +P SI  LSKL  + + +C RLQ LPELP  +  L
Sbjct: 814  EIPNDIGSLSSLRKLELRGN-NFVSLPASIHLLSKLEVITVENCTRLQQLPELPASDYIL 872

Query: 654  LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI--VKDGWMK-HSLYEERGI 710
            +   NCTSL+  P                    DP +L  I   +   M   SL   R  
Sbjct: 873  VKTDNCTSLQVFP--------------------DPPDLCRIGNFELTCMNCSSLETHRRS 912

Query: 711  KKSMYF--PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFR 768
             + + F  PG EIP+WF +QS+G S T K   P  A  +K I FA CA++V       F 
Sbjct: 913  LECLEFVIPGREIPEWFNNQSVGDSVTEKL--PSDACNSKCIGFAVCALIVPQDNPSAFP 970

Query: 769  HKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYD 828
                    D +   + C W       L   F  ++    SDH++L             + 
Sbjct: 971  ENPL---LDPDTCRIGCHWNNYGVYSLCQNF--RVRQFVSDHLWLF-------VLRSLFW 1018

Query: 829  EFSFRIHCSFHFPPYLERG-----EVKKCGIHFVYAQDSADHILK 868
            +   R+  +F F      G     +VKKCG+  +Y  D  + I K
Sbjct: 1019 KLEKRLEVNFVFKITRAVGNNRCIKVKKCGVRALYEYDKEELISK 1063


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 267/819 (32%), Positives = 410/819 (50%), Gaps = 144/819 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDTR NFT HL+  L+ K I+TF D ++L +G+ I+  LL  IE S I +I
Sbjct: 25  YDVFLSFMGEDTRHNFTDHLYRALNRKGIRTFRDAEELRKGEEIAPELLKAIEKSRICLI 84

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA SRW                      FY VDPS VR+Q+ S+ + F R  +R 
Sbjct: 85  ILSKNYARSRWCLEELVKIMERRQSMGQLVFPIFYHVDPSDVRRQTGSYEQAFER-HERN 143

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           P++++RW+ AL E   LSG+  +    E+  IE+I + +L R        +K L+G++  
Sbjct: 144 PDQIQRWRAALREVGSLSGWHVHDWS-EADYIEDITHVILMRFSQKILHVDKKLIGMDYR 202

Query: 160 IEEIE----SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++++E     ++ + S  V  + I+G GGI K TIA  ++N+IS  F  + F  NVRE  
Sbjct: 203 LDQLEENFPQIIDLLSNDVRMVGIYGFGGIGKTTIAKVLYNQISAQFMIASFIANVREDS 262

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIESQL----NRLARKKVRIVFDDVTS-------- 261
           ++ G+  LQK+LL ++   +   + N++  +    +RL  KKV +V DDV          
Sbjct: 263 KSRGLLHLQKQLLQDIFPRRKNFISNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALA 322

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+I+TTRDK +L+    +  Y  K+L + +A +LF   AF  +H    + 
Sbjct: 323 GDHNWFGLGSRIIVTTRDKHLLEVHEMDALYEAKKLDHKEAVELFSWNAFKQNHPKEDYE 382

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            +T+  + Y  G+PL LKVLG +L G++ + W+S + KLE  P+ EI+ VL  SYD LD 
Sbjct: 383 IVTNSVVHYVNGLPLGLKVLGSFLYGKTIQQWKSELHKLEREPNREIQCVLMRSYDELDR 442

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           +QK +FLD+ACF  GE +D V  I DA              K LI++ +   I MHDLLR
Sbjct: 443 TQKQIFLDVACFFNGEDKDFVTRILDACNFFAESGLRVLGDKCLISI-IDNNIWMHDLLR 501

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MGR IV ++    PGK +RL + + + +VL +  GT+AI+GI  +++ + + IH+ + +
Sbjct: 502 HMGRGIVGQKFPEDPGKWSRLCYPEVVSRVLTRKMGTKAIKGILFNLS-IPKPIHITTES 560

Query: 481 FSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
              M  LR L+ Y D         NK  +S     P  E+R+L W   PL++L  +   E
Sbjct: 561 LEMMKNLRLLKIYLDHESFSTREDNKVKLSKDFEFPSLELRYLYWQGYPLESLPSSFFVE 620

Query: 531 KLVSLKMPCTKVEQLWD--------DVQRLPSSLCTFKTP-------------------- 562
            LV L M  + + QLW+        +  RL  S    + P                    
Sbjct: 621 DLVELDMRYSSLTQLWENDMLLEKLNTIRLSCSQHLIEIPDISICAPNLEKLILDGCSSL 680

Query: 563 -------------ITFEIIDCKMLERLPD--ELENLEYLTVKG----------------- 590
                        I   + +CK L   P   +++ LE L   G                 
Sbjct: 681 LILHPSIGKLSKLILLNLKNCKKLSSFPSIIDMKALEILNFSGCSGLKKFPDIRGNMDHL 740

Query: 591 -------TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
                  T I ELP S+G ++ +  L L    NL+ +P SI  L  L +LF+S C +L+ 
Sbjct: 741 LELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSKLEN 800

Query: 644 LPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
            PE+  ++  L     + TS+E LP+ +  +  ++ +N+
Sbjct: 801 FPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNM 839



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 51/295 (17%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P  +  L  +K+L LS N N   IP  I  L+ L  L + HC+ L  +PELP ++  + 
Sbjct: 967  IPNDICSLISLKKLDLSRN-NFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVD 1025

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW---------------- 699
            A NCT+L    + + ++  + ++   N  K   ++ S+  ++                  
Sbjct: 1026 AHNCTALFPTSSSVCTLQGLQFL-FYNCSKPVEDQSSDQKRNALQRFPHNDASSSASVSS 1084

Query: 700  ------MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
                  ++  L E   I  S+ FPG+ IP+W  HQ++GS   +K   P     +  + F 
Sbjct: 1085 VTTSPVVRQKLLE--NIAFSIVFPGSGIPEWIWHQNVGS--FIKIELPTDWYNDDFLGFV 1140

Query: 754  FCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFL 813
             C+++         R  S     D   Y        K  GH + W   K   + S+HV+L
Sbjct: 1141 LCSILEHLPERIICRLNS-----DVFYYG-----DFKDIGHDFHW---KGDILGSEHVWL 1187

Query: 814  G---CNSFGGEYFGP----NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            G   C+      F      NY E SF     F+         VKKCG+  +YA+D
Sbjct: 1188 GYQPCSQLRLFQFNDPNDWNYIEISFEAAHRFNSS---ASNVVKKCGVCLIYAED 1239



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
           +++ LP+S+C  K+     +  C  LE  P+   ++ENL+ L + GT+I  LP S+ RL 
Sbjct: 773 NLKSLPTSICRLKSLEYLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLK 832

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            +  L +    NL  +P+ +  L+ L  L +S C +L  LP    NLG L
Sbjct: 833 GLVLLNMRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPR---NLGSL 879


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 269/820 (32%), Positives = 422/820 (51%), Gaps = 134/820 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFT HL+  L  K +  FIDD L RG+ IS++L  TI+ S I+I+I
Sbjct: 21  YDVFLSFRGEDTRSNFTGHLYMFLRQKGVNVFIDDGLERGEQISETLFKTIQNSLISIVI 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY+VDPS VRKQ+  F    ++    F 
Sbjct: 81  FSENYASSTWCLDELVEIMECKKSKGQKVLPIFYKVDPSDVRKQNGWFREGLAKHEANFM 140

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ-SKNKGLVGVECS 159
           EK+  W++ALT AA+LSG+     R E+ LI++I  +VL  L+ T   + N+ LVG++  
Sbjct: 141 EKIPIWRDALTTAANLSGWHLGA-RKEAHLIQDIVKEVLSILNHTKPLNANEHLVGIDSK 199

Query: 160 IEEI---ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           IE +   E +    SE V  L I+GIGGI K T+A A+++K++  FEG  +  +VREA +
Sbjct: 200 IEFLYRKEEM--YKSECVNMLGIYGIGGIGKTTLAKALYDKMASQFEGCCYLRDVREASK 257

Query: 217 T-GGIKDLQKKLLSELSK-DGNMRNIESQL----NRLARKKVRIVFDDVT---------- 260
              G+  LQKKLL ++ K D  + +++  +    NRL  KKV I+ DDV           
Sbjct: 258 LFDGLTQLQKKLLFQILKYDLEVVDLDWGINIIKNRLRSKKVLILLDDVDKLEQLQALVG 317

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  G+++I+TTR+KQ+L +   +K Y ++ L   +A +LF + AF      +++++
Sbjct: 318 GHDWFGQGTKIIVTTRNKQLLVSHGFDKMYEVQGLSKHEAIELFRRHAFKNLQPSSNYLD 377

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L+++A +Y  G PLAL VLG +LC RS    W   +   E     +I+++L++S+D L+D
Sbjct: 378 LSERATRYCTGHPLALIVLGSFLCDRSDLAEWSGILDGFENSLRKDIKDILQLSFDGLED 437

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFY------------RIRMHDLLRD 421
             K +FLDI+C L G+    V  +     S+++  +              R++MHDL++ 
Sbjct: 438 EVKEIFLDISCLLVGKRVSYVKKMLSECHSILDFGITKLKDLSLIRFEDDRVQMHDLIKQ 497

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG +IV  ES + PGKR+RLW  KDI +V   N+G++A++ I L +    R I ++  AF
Sbjct: 498 MGHKIVHDESHDQPGKRSRLWLEKDILEVFSNNSGSDAVKAIKLVLTDPKRVIDLDPEAF 557

Query: 482 SKMPKLRFLRFYGD-----KNKCMVSHLEGVPFAEVRHLEWPQCPL-------------- 522
             M  LR L   G+     K K + + L+ + +    H   P C +              
Sbjct: 558 RSMKNLRILMVDGNVRFCKKIKYLPNGLKWIKWHRFAHPSLPSCFITKDLVGLDLQHSFI 617

Query: 523 ----KTLNICAE------------KLVSLKMPCTKVEQLW----DDVQRLPSSLCTFKTP 562
               K L  C              K +S       +E+L+     +++ +P S  + +  
Sbjct: 618 TNFGKGLQNCMRLKLLDLRHSVILKKISESSAAPNLEELYLSNCSNLKTIPKSFLSLRKL 677

Query: 563 ITFEI---------------------ID---CKMLERLPD--ELENLEYLTV-KGTTIRE 595
           +T ++                     +D   CK LE++PD     NL  L+  + T +  
Sbjct: 678 VTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKKLEKIPDISSASNLRSLSFEQCTNLVM 737

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGL 653
           + +S+G L+ +  L L N SNL+++P  I   + L  L +S C++L+ +P+     NL  
Sbjct: 738 IHDSIGSLTKLVTLKLQNCSNLKKLPRYIS-WNFLQDLNLSWCKKLEEIPDFSSTSNLKH 796

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
           LS   CTSL  +   + S+S ++ +NL  C+ L+  P+ L
Sbjct: 797 LSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYL 836



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 10/173 (5%)

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVP----FAEVRHLEWPQCPLKTLNICAEKL 532
           N     K+P+     F  D N      LE +P     + ++HL   QC   +L +  + +
Sbjct: 755 NCSNLKKLPRYISWNFLQDLNLSWCKKLEEIPDFSSTSNLKHLSLEQC--TSLRVVHDSI 812

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---K 589
            SL    +   +   ++++LPS L   K+     +  C  LE  P+  EN++ L +    
Sbjct: 813 GSLSKLVSLNLEKCSNLEKLPSYL-KLKSLQNLTLSGCCKLETFPEIDENMKSLYILRLD 871

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
            T IRELP S+G L+ +    L   +NL  +P +   L  L  L +S   R +
Sbjct: 872 STAIRELPPSIGYLTHLYMFDLKGCTNLISLPCTTHLLKSLGELHLSGSSRFE 924


>gi|297805564|ref|XP_002870666.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316502|gb|EFH46925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 272/895 (30%), Positives = 417/895 (46%), Gaps = 157/895 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R+ F SHLH+    K I TF D ++ RG  I   L+  I  S ++I++
Sbjct: 14  YHVFSSFHGPDVRNGFLSHLHNHFESKGITTFNDQEIERGHTIGPELVQAIRESRVSIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE+YASS W                      FY+VDPS VRKQ   FG  F +  +   
Sbjct: 74  LSEKYASSGWCLDELVEILKCKEASGQAVLTIFYKVDPSDVRKQRGDFGNTFKKTCEGKT 133

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW  ALT+ A ++G  S     E+++I++IA DV  +L+ T     +G+VG+E  
Sbjct: 134 EEVKQRWIKALTDVATIAGEHSLNWANEAEMIQKIATDVSNKLNVTPSRDFEGMVGLEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + +++SLLC+    V  + IWG  GI K TIA A+FN++S  F  S F  N+        
Sbjct: 194 LTKLDSLLCLECNDVKMIGIWGPAGIGKTTIARALFNQLSTGFRHSCFMGNIDVNNYDSK 253

Query: 220 IKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------------- 261
           ++ L   LLS++   KD  + ++ +    L  ++V IV DDV                  
Sbjct: 254 LR-LHNMLLSKILNQKDMKIHHLGAIKEWLHNQRVLIVLDDVDDLEQLEVLAKESFWFGP 312

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
            SR+I+T +DK++LK    N  Y +      +A ++FC  AF          E   K ++
Sbjct: 313 RSRIIVTLKDKKILKAHGINDIYHVDYPSKKEALEIFCLSAFKQSSPQDGFEEFARKVVE 372

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
               +PLAL V+G    G S++ W   +  +EI    ++E+VL++ YD L +  +++FL 
Sbjct: 373 LCGNLPLALCVVGSSFYGESEDEWRLQLYGIEINLDRKVEDVLRVGYDKLLEKHQSLFLH 432

Query: 382 IACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF   E  D V ++               A+KSL+++    RIRMH LL+ +GR +V 
Sbjct: 433 IACFFNHESVDYVSTMLADSTLDVENGLKNLAAKSLVHISTHGRIRMHCLLQQLGRHVVV 492

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           ++S    GKR  L   K+I  VL   TGT ++ GIS DM+K+  E  ++  AF +M  L+
Sbjct: 493 QQS-GEQGKRQFLVEAKEIRDVLANKTGTGSVIGISFDMSKIG-EFSISKRAFERMCNLK 550

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLW 546
           FL+FY + N  ++  ++ +P   +R L W   P K+L +    E LV L M  +K+E LW
Sbjct: 551 FLKFY-NGNVSLLEDMKYLP--RLRLLHWDSYPRKSLPLTFQPECLVELHMRYSKLEMLW 607

Query: 547 DDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLPDELENL------- 583
             +Q L +                +L       T ++I C+ L  LP  + NL       
Sbjct: 608 GGIQPLANLKKIDLGYSFNLKEIPNLSKATNLETLKLIGCESLVVLPSSIRNLHKLEMLD 667

Query: 584 ----------------------------------------EYLTVKGTTIRELP------ 597
                                                   EYL+V GT I+E P      
Sbjct: 668 ASGCSKLQVIPTNIDLASLEEVKMDNCSRLRSFPDISRNIEYLSVAGTKIKEFPASIVGY 727

Query: 598 -----------ESLGRLSWVKRLILS---NNSNLERIPESIRHLSKLTFLFISHCERLQT 643
                       SL RL+ V + + S   +NS+++ IP+ +  L  L +L + +C +L +
Sbjct: 728 WSRLDILQIGSRSLKRLTHVPQSVKSLDLSNSDIKMIPDYVIGLPHLGYLNVDNCRKLVS 787

Query: 644 LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
           +     +L  LSA +C SL+ +        S L  + C  LKLD        K G ++ S
Sbjct: 788 IQGHFPSLASLSAEHCISLKSVCCSFHRPISNLMFHNC--LKLD-----NASKRGIVQLS 840

Query: 704 LYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
            Y      KS+  PG EIP  F HQ+ G+S T+   P     ++    F  C ++
Sbjct: 841 GY------KSICLPGKEIPAEFTHQTRGNSITISLAPGGKEVFSVFSRFKACLLL 889


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 269/797 (33%), Positives = 401/797 (50%), Gaps = 124/797 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFT HL+  L  + I TF DD+L RG+ I+  LL  IE S  ++I+
Sbjct: 24  YDVFLSFRGEDTRYNFTDHLYSALGRRGIHTFRDDKLRRGEAIAPELLKAIEESRSSVIV 83

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA SRW                      FY VDPSHVRKQ  SFG  F+   + + 
Sbjct: 84  FSENYAHSRWCLDELVKIMECQKDPAHVVFPIFYHVDPSHVRKQEGSFGEAFAGYEENWK 143

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ RW+ ALTEAA+LSG+   +   ES  I+EI N++ ++L          LVG+   +
Sbjct: 144 DKIPRWRRALTEAANLSGWHI-LDGYESNQIKEITNNIFRQLKCKRLDVGANLVGIGSRV 202

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           +E+   L + S  V  + I G+GGI K TIA  V+N++S  FE   F  N+ E   T G+
Sbjct: 203 KEMILRLHMESSDVRIVGICGVGGIGKTTIAKVVYNELSCEFECMSFLENIGEVSNTQGL 262

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNR-------LARKKVRIVFDDVT------------- 260
             LQ +LL ++ +    +N+    ++       L+ K+V +V DDV              
Sbjct: 263 SHLQNQLLVDVLEGEVSQNMNGVAHKASMIKDILSSKRVLMVLDDVDHPSQLEYLLGHRE 322

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVIITTR+K VL     +  Y +K L + +  +LF  +AF  +   + +  L  
Sbjct: 323 WLGEGSRVIITTRNKHVLAVQKVDNLYEVKGLNFEEDCELFSLYAFKQNLPKSDYRNLAC 382

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + Y QG+PLALKVLG  L  ++   WES + KL+  P  EI  VLK SYD LD ++KN
Sbjct: 383 RVVGYCQGLPLALKVLGSLLFNKTIPEWESELHKLDREPEAEIHNVLKRSYDGLDRTEKN 442

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLD+ACF +GE RD V  I D               K LI L  +  IRMHDL++ MG 
Sbjct: 443 IFLDVACFFKGEDRDFVSRILDGCDFHAKRGIRNLNDKCLITLP-YNEIRMHDLIQHMGW 501

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGIS-LDMNKVNREIHMNSYAFSK 483
           EIVR++  + P K +RLW   D  + L   T  E +E +  +D++   + I M+   FS+
Sbjct: 502 EIVREKFPDEPNKWSRLWDPCDFERAL---TAYEDLERLKVIDLSYSRKLIQMSE--FSR 556

Query: 484 MPKLRFLRFYGDKNKCMVSHLEGVP----FAEVRHLEWPQC-PLKTLNICAEKLVSLKMP 538
           MP L  L   G      VS ++  P      ++  L    C  LK L      L SL++ 
Sbjct: 557 MPNLESLFLNG-----CVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEIL 611

Query: 539 ----CTKVEQ---------------LWDD-VQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
               C+K E+               L D  ++ LP S+   ++    ++ DC   E+ P+
Sbjct: 612 NLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPE 671

Query: 579 E---LENLEYLTVKGTTIRELPESLGRLSWVKRL----------------------ILSN 613
           +   +++L  L ++ T I++LP+S+G L  ++ L                      +L  
Sbjct: 672 KGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLR 731

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN---LGLLSARNCTSLEKLPAGLS 670
           N+ ++ +P+SI  L  L  L +S C + +  PE   N   L  L  RN T+++ LP  + 
Sbjct: 732 NTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRN-TAIKDLPDSIG 790

Query: 671 SMSSVLYVNLCNFLKLD 687
            + S+ +++L +  K +
Sbjct: 791 DLKSLEFLDLSDCSKFE 807



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 15/142 (10%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   K+    ++ DC   E+ P++   ++ L  L +K T I++LP ++ RL  
Sbjct: 782 IKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKK 841

Query: 606 VKRLILSNNSNLER--IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
           +KRL+LS+ S+L    I   + +L KL    IS C+    +  LP +L  + A +CTS E
Sbjct: 842 LKRLVLSDCSDLWEGLISNQLCNLQKLN---ISQCKMAGQILVLPSSLEEIDAYHCTSKE 898

Query: 664 KLPAGLSSMSSVLYVNLCNFLK 685
            L       S +L++   N+LK
Sbjct: 899 DL-------SGLLWLCHLNWLK 913



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 63/109 (57%), Gaps = 7/109 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   ++  + ++ DC   E+ P++   +++L+ L ++ T I++LP+S+G L  
Sbjct: 735 IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKS 794

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++ L LS+ S  E+ PE   ++ +L  L +    ++  + +LP N+  L
Sbjct: 795 LEFLDLSDCSKFEKFPEKGGNMKRLRELHL----KITAIKDLPTNISRL 839


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 265/773 (34%), Positives = 415/773 (53%), Gaps = 103/773 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLS+RGEDTR NFTSHL   L  K +  FIDD+L RG  IS++LL +I+ + I+III
Sbjct: 17  YDVFLSYRGEDTRTNFTSHLDMALRQKGVNVFIDDKLERGKQISETLLKSIQEALISIII 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY+VDPS +RKQS SFG   ++ + +F 
Sbjct: 77  FSQNYASSSWCLDELVNIIECKKSKDQIVLPVFYKVDPSDIRKQSGSFGEALAKHQAKFK 136

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVGVEC 158
            K++ W+ ALT AA+LSG+D    R E+ LI +I   VL  L+ T       K  VG++ 
Sbjct: 137 TKIQIWREALTTAANLSGWDLGT-RKEADLIGDIVKKVLSTLNRTCMPLYVAKYPVGIDS 195

Query: 159 SIEEIE----SLLCIGSE-------------GVCKLRIWGIGGISKITIAGAVFNKISRH 201
            +E I+    ++    ++             G+  + I+GIGGI K T+A A++NKI+  
Sbjct: 196 KLEYIKLRSHNMFEKNNKFHYRTQHEYEFDTGIYMVGIYGIGGIGKTTLAKALYNKIASQ 255

Query: 202 FEGSYFALNVREA-EETGGIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIV 255
           FEG  F  NVREA ++  G+  LQ+ LL E L  D  + N++  +N    RL  KKV IV
Sbjct: 256 FEGCCFLSNVREASKQFNGLAQLQESLLYEILMVDLKVVNLDRGINIIRNRLCSKKVLIV 315

Query: 256 FDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
            DDV                  GSR+I+TTR+K +L +   ++ + +  L    A +LF 
Sbjct: 316 LDDVDKLEQLEALVGGCDWFGKGSRIIVTTRNKHLLFSHGFDEIHNILGLNEDKAIELFS 375

Query: 300 QWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE 359
             AF  +   +++++L+ +A  Y +G PLAL VLG +LC R +  W S + + E   + +
Sbjct: 376 WHAFKKNRPSSNYLDLSKRATSYCKGHPLALVVLGSFLCIRDQAEWCSILDEFENSLNKD 435

Query: 360 IEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASK--------SLINLDLFY 411
           I+++L++S+D L+D  K++FLDI+C L GE  + V  +  A           L++L L  
Sbjct: 436 IKDILQLSFDGLEDKIKDIFLDISCLLVGEKVEYVKDMLGACHVNLDFGVIVLMDLSLIT 495

Query: 412 ----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM 467
               +++MHDL++ MG++IV  ES+   GKR+RLW  +D+++VL  N+GT+AI+ I LD 
Sbjct: 496 IENDKVQMHDLIKQMGQKIVCGESL-ELGKRSRLWLVQDVWEVLVNNSGTDAIKAIKLDF 554

Query: 468 NKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI 527
               R + +NS AF KM  LR L     +N    + +E +P   ++ ++W   P  TL  
Sbjct: 555 PNPTR-LGVNSQAFRKMKNLRLLIV---QNARFSTKIEYLP-DSLKWIKWHGFPQPTLPS 609

Query: 528 C--AEKLVSLKMPCTKVEQL---WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
           C   + LV L +  + ++      +D +RL     +  T           LE++P+    
Sbjct: 610 CFITKNLVGLDLQYSFMKTFGKRLEDCKRLKHVDLSHST----------FLEKIPNFSAA 659

Query: 581 ENLEYL-TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L  +    +  + +S+  L  +  L L+  SNL+++P     L  L +L +SHC+
Sbjct: 660 SNLEELYLINCKNLGMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCK 719

Query: 640 RLQTLPELPC--NLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLKLDP 688
           +L+ +P+     NL  L   NCT+L  +   + S+   ++L +++C+ LK  P
Sbjct: 720 KLEKIPDFSAASNLEELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLP 772



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 5/138 (3%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGRLS 604
           ++++LP      ++     +  CK LE++PD     NLE L +   T +R + +S+  L 
Sbjct: 696 NLKKLPRGYFILRSLRYLNLSHCKKLEKIPDFSAASNLEELYLFNCTNLRMIDKSVFSLH 755

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC--NLGLLSARNCTSL 662
            +  L L   SNL+++P S   L  L +L +S+C++L+ +P+L    NL  L    CT+L
Sbjct: 756 KLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPDLSAASNLQSLCLHECTNL 815

Query: 663 EKLPAGLSSMSSVLYVNL 680
             +   + S+  ++ ++L
Sbjct: 816 RLIHESVGSLYKLIDMDL 833



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRLS 604
           ++ +LP+ L   K+     + +C  LE  P   EN+E L    +  T I+ELP S+G L+
Sbjct: 838 NLAKLPTYL-RLKSLRYLGLSECCKLESFPSIAENMESLRELDMDFTAIKELPSSIGYLT 896

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            + RL L+  +NL  +P +I  L  L  L +S C R +  P
Sbjct: 897 QLYRLNLTGCTNLISLPNTIYLLRNLDKLLLSGCSRFEMFP 937


>gi|351723127|ref|NP_001236756.1| candidate disease-resistance protein SR1 [Glycine max]
 gi|37780302|gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine max]
          Length = 1137

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 267/772 (34%), Positives = 382/772 (49%), Gaps = 111/772 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSF G+DTR  FT +L+  L  + I TFIDDQ L RGD I  +L   I+ S IAI
Sbjct: 11  IYDVFLSFTGQDTRHGFTGYLYKALDDRGIYTFIDDQELPRGDEIKPALSDAIQGSRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YA S +                     FY+VDPSHVR Q  S+G   ++ +KRF
Sbjct: 71  TVLSQNYAFSTFCLDELVTILHCKSEGLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I+ I   V + ++          
Sbjct: 131 KANKEKLQKWRMALQQVADLSGYHFKDGDAY--EYKFIQSIVEQVSREINRAPLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS+ V  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 189 VGLGSQVIEVRKLLDVGSDDVVHIIGIHGMGGLGKTTLAVAVYNLIAPHFDESCFLQNVR 248

Query: 213 EAEE-----------TGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS 261
           E                G KD+    L+   +  +M       +RL RKKV ++ DDV  
Sbjct: 249 EESNLKHLQSSLLSKLLGEKDIT---LTSWQEGASMIQ-----HRLRRKKVLLILDDVDK 300

Query: 262 ----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                           GSRVIITTRDK +LK     + Y +K L +  A  L    AF  
Sbjct: 301 REQLKAIVGKPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNHNAALHLLTWNAFKR 360

Query: 306 DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLK 365
           + +D  + ++ ++ + YA G+PLAL+V+G  L G++   WESA+   + IP  EI ++L+
Sbjct: 361 EKIDPIYDDVLNRVVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEILKILQ 420

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY 411
           +S+D+L++ Q+NVFLDIAC  +G    EV  IF A               KSLI  +   
Sbjct: 421 VSFDALEEEQQNVFLDIACCFKGHEWTEVDDIFRALYGNGKKYHIGVLVEKSLIKYNRNN 480

Query: 412 R--IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK 469
           R  ++MH+L++DMGREI R+ S   PGKR RLW  KDI QVLK NTGT  IE I LD + 
Sbjct: 481 RGTVQMHNLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIICLDSSI 540

Query: 470 VNRE--IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPFAEVRHLEWPQCPLKTL- 525
            ++E  +  N  AF KM  L+ L     K     +++ EG     +R LEW + P   L 
Sbjct: 541 SDKEETVEWNENAFMKMENLKILIIRNGKFSIGPNYIPEG-----LRVLEWHRYPSNCLP 595

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELEN 582
            N     LV  K+P + +            S              CK L ++PD  +L N
Sbjct: 596 SNFDPINLVICKLPDSSITSF-----EFHGSSKKLGHLTVLNFDKCKFLTQIPDVSDLPN 650

Query: 583 LEYLTV-KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           L+ L+  K  ++  + +S+G L+ +K+L       L   P    +L+ L  L IS C  L
Sbjct: 651 LKELSFRKCESLVAVDDSVGFLNKLKKLSAYGCRKLTSFPP--LNLTSLRRLQISGCSSL 708

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPAGLSSMS-------SVLYVNLCNFLKL 686
           +  PE+   LG +       L  LP      S       S LY+  C  ++L
Sbjct: 709 EYFPEI---LGEMVKIRVLELHDLPIKELPFSFQNLIGLSRLYLRRCRIVQL 757



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 91/220 (41%), Gaps = 45/220 (20%)

Query: 602  RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
            R + V  L LS N N   +PE  + L  L  L +S CE LQ +  LP NL    A NC S
Sbjct: 817  RFAHVGYLNLSGN-NFTILPEFFKELKFLRTLDVSDCEHLQKIRGLPPNLKDFRAINCAS 875

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
            L       SS  S+L                       +   LYE  G K    FPG  I
Sbjct: 876  LT------SSSKSML-----------------------LNQELYEAGGTK--FMFPGTRI 904

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-----FPAFLKYFRHKSGEDDW 776
            P+WF  QS G S++   R   PA   KL+      V V     FP  + +  H      +
Sbjct: 905  PEWFNQQSSGHSSSFWFRNKFPA---KLLCLLIAPVSVPLYSLFPPKVSFGHHVPYPKVF 961

Query: 777  -DGNVYAV-CCDWKRK--SEGHLYSWFLGKISYVESDHVF 812
             +G   A   C WK++     H Y + L K+ + E+D++F
Sbjct: 962  INGKCQAFWGCHWKQRMMELDHTYIFDLQKLPF-ENDNLF 1000


>gi|227438221|gb|ACP30600.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 909

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 250/755 (33%), Positives = 388/755 (51%), Gaps = 78/755 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF GED R  F SHL      K I+TFID+ + R   I   L+  I  S  A+++
Sbjct: 13  HHVFPSFSGEDVRRTFLSHLLKEFRRKGIRTFIDNDIKRSQLIGPELVQAIRESRFAVVV 72

Query: 62  FSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMK 104
            S+RYASSRW                  FY V+PS VR  S  FG  F    +  PE +K
Sbjct: 73  LSKRYASSRWCLNELVEIKESSKNVMPVFYEVNPSDVRNLSGEFGTAFEEACQGKPEDVK 132

Query: 105 -RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEI 163
            RW+ AL   A+++G  S     E+ +IE+IA  +   L++     +  LVG+   + E+
Sbjct: 133 QRWRQALVYVANIAGESSQNWDNEADMIEKIAMSISSELNSAPSGDSDNLVGINAHMSEM 192

Query: 164 ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD- 222
           +SLLC+ S  V  + IWG  GI K T+A A+F ++S  F+ S F  N + +    G+ + 
Sbjct: 193 DSLLCLESNEVKMVGIWGPAGIGKTTVARALFKQLSVSFQHSIFVENFKGSYRRTGLDEY 252

Query: 223 -----LQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT--------------- 260
                LQ++ LSE+    +M+  +  L   RL   KV +V DDV                
Sbjct: 253 GFKLRLQEQFLSEVIDHKHMKIHDLGLVKERLQDLKVLVVLDDVDRLEQLDALVKQSQWF 312

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSR+I+TT +KQ+L+       Y+M     +++ ++FCQ AFG       +IEL  + 
Sbjct: 313 GPGSRIIVTTENKQLLRAHGIKLIYQMGFPSKSESLEIFCQSAFGKSSAPDGYIELATEI 372

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
            K A  +PLALKVLG  L G +K+  ++A+ +L      +I  VL++ YD L D  K++F
Sbjct: 373 TKLAGYLPLALKVLGSSLRGMNKDEQKAALPRLRTSLSEDIRNVLRVGYDGLHDKDKSIF 432

Query: 380 LDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYRIR------MHDLLRDMGRE 425
           L +AC   GE+ + V  +  +S        + L N  L Y +R      MH LL+ +GRE
Sbjct: 433 LYVACLFSGENVEYVKLLLASSGLDVNFGLQVLTNRSLIYILRCNRTIMMHSLLQHLGRE 492

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           +V  +SI+ PGKR  L    +IY VL  NTGT A+ GISLD++ +N E  +N  +F  M 
Sbjct: 493 VVCAQSIDEPGKRQFLVDASEIYDVLVDNTGTAALLGISLDISTIN-EWFLNERSFGGMH 551

Query: 486 KLRFLRFYGD---KNKCMVSHLEGVPFA--EVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
            L FL+FY     KN+  +    G+ +   ++R L W   P  +L +    E LV L + 
Sbjct: 552 NLMFLKFYKSSLGKNQTELHLPRGLDYLPRKLRLLHWDTYPTTSLPLSFRPEFLVVLNLR 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            +K+E+LW+  Q L       ++    ++   + L+ +PD  +  N+E L +   +++  
Sbjct: 612 ESKLEKLWEGEQPL-------RSLTHMDLSMSENLKEIPDLSKAVNMEELCLSHCSSLVM 664

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           LP S+  L+ +  L +   S LE IP++I +L  L+ L +  C RL T P++  N+G LS
Sbjct: 665 LPPSVKNLNKLVVLEMECCSKLESIPKNI-NLESLSILNLDKCSRLTTFPDVSSNIGYLS 723

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
               T++E++P  + S  ++  +++  C  LK  P
Sbjct: 724 ISE-TAIEQVPETIMSWPNLAALDMSGCTNLKTFP 757


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1177

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 254/773 (32%), Positives = 393/773 (50%), Gaps = 93/773 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++ VFLSFRGED R  F SH+        I  FID+++ RG +I   LL  I  S IAII
Sbjct: 39  LHPVFLSFRGEDVRKGFLSHIQKEFQRMGITPFIDNEMKRGGSIGPELLQAIRGSKIAII 98

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y SS+W                      FY VDPS VRKQ   FG+ F +     
Sbjct: 99  LLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFRKTCVGR 158

Query: 100 PEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           PE++K +WK ALT AA++ G DS     E+ +I +IA DV   L  T        VG+E 
Sbjct: 159 PEEVKQKWKQALTSAANILGEDSRNWENEADMIIKIAKDVSDVLSFTPSKDFDEFVGIEA 218

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
              EI SLL +  E V  + IWG  GI K TI+  ++NK+   F+      N++      
Sbjct: 219 HTTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRP 278

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQK+LLS++   KD  + ++     RL  +KV +V DDV +         
Sbjct: 279 CHDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDRKVLLVLDDVDALVQLDAMAK 338

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+ T+D ++LK       Y++      +A ++FC +AFG         +
Sbjct: 339 DVRWFGLGSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGQKSPKVGFEQ 398

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +       A  +PL L+V+G YL   SK+ W  ++ +L      +IE VLK SY+SL + 
Sbjct: 399 IARTVTTLAGKLPLGLRVMGSYLRRMSKQEWARSIPRLRTSLDDDIESVLKFSYNSLAEE 458

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDAS--------------KSLINLDLFYRIRMHDLLR 420
           +K++FL IACF   E R E + +F A+              KSL++L+ F  I MH+LL 
Sbjct: 459 EKDLFLHIACFFRRE-RIETLEVFLANKFGDVKQGLQILADKSLLSLN-FGNIEMHNLLV 516

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV-NREIHMNSY 479
            +G +I+RK+SI+ PGKR  L   +DI +VL ++TGT  + GI L+++ V    I+++  
Sbjct: 517 QLGLDIIRKQSIHKPGKRQFLVDAEDICEVLTEDTGTRTLVGIDLELSGVIEGVINISER 576

Query: 480 AFSKMPKLRFLRF---YGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKL 532
           AF +M  L+FLRF   YGD+   ++   +G+     ++R L W + PL  L      E L
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSNISRKLRLLHWERYPLTCLPSKFNPEFL 636

Query: 533 VSLKMPCTKVEQLWD------DVQRLPSSLCT-------FKTPITFE---IIDCKMLERL 576
           V + M  + +E+LW+      +++ +  S C        F T    +   ++DC  L  L
Sbjct: 637 VKINMRDSMLEKLWEGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLVDCLSLVEL 696

Query: 577 PDELEN----LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           P  + N    LE   +  +++ +LP S+G L+ +K+L L+  S+L ++P SI +++ L  
Sbjct: 697 PSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLPSSIGNVTSLKE 756

Query: 633 LFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L +S C  L  +P       NL  L A  C+SL +LP+ + +++++  + L N
Sbjct: 757 LNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANLRELQLMN 809



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 53/238 (22%)

Query: 553  PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRL 609
            PSS+          +  C  L +LP    + NL+ L + G +++ ELP S+   + ++ L
Sbjct: 817  PSSILKLTRLKDLNLSGCSSLVKLPSIGNVINLQTLFLSGCSSLVELPFSIENATNLQTL 876

Query: 610  ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLP 666
             L+  S+L  +P SI +++ L  L+++ C  L+ LP L     NL  LS  NC+S+ +LP
Sbjct: 877  YLNGCSDLLELPSSIWNITNLQSLYLNGCSSLKELPSLVGNAINLQSLSLMNCSSMVELP 936

Query: 667  AGLSSMSSVLYVNL--CNFL-----KLDPNELSEIVKDGWMKHSLYEERGIKKSMY---- 715
            + + + +++ Y+++  C+ L     KL+ N+  ++V    +  SL  + G  +S+     
Sbjct: 937  SSIWNATNLSYLDVSSCSSLVGLNIKLELNQCRKLVSHPVVPDSLILDAGDCESLVERLD 996

Query: 716  ------------------------------------FPGNEIPKWFRHQSMGSSATLK 737
                                                 PG ++P +F +++ G S T+K
Sbjct: 997  CSFQNPKIVLNFANCFKLNQEARDLIIQTSTCRNAILPGGKVPAYFTYRATGDSLTVK 1054



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKG-TTIRELPESLGRLSWV 606
           +LPSS+    +     +  C  L  +P  +    NL+ L   G +++ ELP S+G ++ +
Sbjct: 743 QLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANL 802

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLEK 664
           + L L N S+L   P SI  L++L  L +S C  L  LP +    NL  L    C+SL +
Sbjct: 803 RELQLMNCSSLIEFPSSILKLTRLKDLNLSGCSSLVKLPSIGNVINLQTLFLSGCSSLVE 862

Query: 665 LPAGLSSMSSV--LYVNLCNFLKLDPNELSEIV 695
           LP  + + +++  LY+N C+ L   P+ +  I 
Sbjct: 863 LPFSIENATNLQTLYLNGCSDLLELPSSIWNIT 895


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 248/712 (34%), Positives = 390/712 (54%), Gaps = 87/712 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VF+SFRGED R +F SHL   LS  +IK ++DD  L +GD +  SL   I+ S +AI+
Sbjct: 15  YQVFISFRGEDVRTSFISHLRSALSRDNIKAYMDDHNLQKGDELWPSLCQAIQDSELAIV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+S+W                      FY VDPSH+RK   + G   S+    F
Sbjct: 75  VFSEHYAASKWCLNELVEILHCRKSQGLAVIPVFYEVDPSHIRKYDGTCGEAISKYETYF 134

Query: 100 PEK----MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD--ATFQSKNKGL 153
            +K    +++WK AL EAA +SG+D +++R +S+LIE+I  DV ++L     F+ K +  
Sbjct: 135 GDKDNESIQKWKAALAEAAHISGWDCSLVRNDSQLIEKIVVDVSEKLSQGTPFKLKVEDF 194

Query: 154 VGVECSIEEIESLLCIGSEGVCK----LRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
           V +E    E++ LL    + + K    + IWG+GGI K TIA A+F+++   ++   F  
Sbjct: 195 VQIEKHCGEVKLLLSKNQDQLQKNVHVIGIWGMGGIGKTTIAKALFSQLFPQYDAVCFLP 254

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS-------- 261
           NVRE     G+  L+ KLLS+L K+G+         RL+ KKV IV DDV S        
Sbjct: 255 NVREESRRIGLTSLRHKLLSDLLKEGHHER------RLSNKKVLIVLDDVDSFDQLDELC 308

Query: 262 --------GSRVIITTRDKQVLKNCWANKK-YRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    S+VIITTR++ +L+    ++  Y +K   +A++ +LF   AF        +
Sbjct: 309 EPCNYVGPDSKVIITTRNRHLLRGRVDDRHVYEVKTWSFAESLELFSLHAFNERRPKKGY 368

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L+++A+  A+GVPLALKVLG  L  RS + W+  + KLE   +  I++VL++SYD L 
Sbjct: 369 EDLSNRAVNCARGVPLALKVLGSNLYSRSIKFWDGELSKLENYRNDSIQDVLQVSYDGLH 428

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D +K +FLDIA F +GEH+D+VI I DA              K+L+ L     I+MHDL+
Sbjct: 429 DLEKKIFLDIAFFFKGEHKDDVIRILDACDFYATSGIEVLEDKALVTLSNSGMIQMHDLI 488

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MG  IVR  S   P  R+RL   +++  VL+   G++ IEGI LD++ +  ++H+N+ 
Sbjct: 489 QEMGLNIVRGGS-EDPRNRSRLRDIEEVSDVLENKNGSDLIEGIKLDLSSI-EDLHLNAD 546

Query: 480 AFSKMPKLRFLRFYGDKNKCMVS-HLEGV---PFAEVRHLEWPQCPLKTL--NICAEKLV 533
            F +M  LR LR Y    K   + H  GV     +++R+LEW  C LK+L  + C + LV
Sbjct: 547 TFDRMTNLRILRLYVPSGKRSGNVHHSGVLSKLSSKLRYLEWNGCRLKSLPKSFCGKMLV 606

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
            + MP + V +LW  VQ L +        +  ++ +CK L+ +PD  +   L+++ + G 
Sbjct: 607 EICMPHSHVTELWQGVQDLAN-------LVRIDLSECKHLKNVPDLSKASKLKWVNLSGC 659

Query: 592 -TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
            ++ ++  S+  L  ++   L    N++ + +S +HL  L  + +  C  L+
Sbjct: 660 ESLCDIHPSVFSLDTLETSTLDGCKNVKSL-KSEKHLRSLKEISVIGCTSLK 710



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 552 LPSSLCTFKTPITFEIIDCKM------LERLPDELENLEYLTVKGT-TIRELPESLGRLS 604
           LP+ L + K      I +C++      L  L D   +L  L +K    + ELPE++  LS
Sbjct: 755 LPNELFSLKCLRELRICNCRLAIDKEKLHVLFDGSRSLRVLHLKDCCNLSELPENIWGLS 814

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
            +  L L + S ++ +P +I+HL +L  L + +C  L++LP+LP N+    A NC SL
Sbjct: 815 KLHELRL-DGSRVKTLPTTIKHLKRLNTLSLKNCRMLESLPKLPPNVLEFIATNCRSL 871


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 251/744 (33%), Positives = 386/744 (51%), Gaps = 73/744 (9%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSF+GEDTR  FT HL+  LS + I+TF DD+L RG+ I+  LL  IE S  ++I+
Sbjct: 23  YDVFLSFKGEDTRLKFTDHLYSALSRRGIRTFRDDKLKRGEAIAPELLQAIEESRSSVIV 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA S W                      FY VDPSHV +Q+ SFG  F+   + + 
Sbjct: 83  FSENYAHSTWCLDELVKIMECKKDLGHTVFPIFYHVDPSHVGQQTGSFGEAFAGYEENWK 142

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ RW+ ALTEAADLSG+   +   ES  I++I + +  +L+         LVG++  +
Sbjct: 143 DKIPRWRTALTEAADLSGWHL-LDGYESDQIKKIIDSIFHQLNCKRLDVGANLVGIDSRV 201

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           +E+   L + S  V  + I+G+GGI K TIA  +++K+S  FE   F  N+RE     G+
Sbjct: 202 KEMILRLQMESSDVRIVGIYGVGGIGKTTIAKVIYDKLSCKFECMSFVENIRENSNKQGL 261

Query: 221 KDLQKKLLSEL-----SKDGNMRNIESQLNR--LARKKVRIVFDDVT------------- 260
             LQ +LL ++     S++ N  ++ + + R  L+ K+V I+ DDV              
Sbjct: 262 THLQNQLLGDILEEERSQNINNVDVGASMIRTALSSKRVFIILDDVDHRKQLEALLRHRG 321

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVIITTR++ +L     +  Y ++ L   +A +LF   AF  +   +  I L+ 
Sbjct: 322 WLGKGSRVIITTRNRHLLIEQEVDDSYEVEGLNSEEACELFSLHAFKQNLPKSDFINLSH 381

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             + Y QG+PLAL+VLG  L   +   WES + KL   P  EI +VLK SY  LD ++K+
Sbjct: 382 HMVDYCQGLPLALEVLGSLLFNMTIPQWESQLHKLAKEPMAEIHDVLKSSYGGLDRTEKD 441

Query: 378 VFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRDMGREIV 427
           + LD+ACF +GE RD V+ + DA          +K LI L   + I MHDL++ M  +IV
Sbjct: 442 ILLDVACFFKGEERDFVLRMLDACAEIGIQNLKNKCLITLPYNHMIGMHDLIQQMCWKIV 501

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R+     P K +RLW   DI   L    G + +E ISLD++K+ R +  +S  F+KM  L
Sbjct: 502 RENFPKEPNKWSRLWDAHDIECALTTFKGIKKVETISLDLSKLKR-VSFDSNVFTKMTSL 560

Query: 488 RFLRFYGDKN---KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQ 544
           R L+ +   +        H + V     +    P     + ++   KLV L +  + ++Q
Sbjct: 561 RLLKVHSGVDCYEDMEEKHYDVVKKNASKMRLGPDFEFPSYHL--RKLVELHLNWSNIKQ 618

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT-TIRELPESLGRL 603
           LW + + L   L       + E+I       +P    NLE L ++G  ++ ++  S+G +
Sbjct: 619 LWQENKYL-EGLRVIDLSYSRELIQMLEFSSMP----NLERLILQGCLSLIDIHPSVGNM 673

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCT 660
             +  L L    NL+ +P+SI  L  L  L ++ C R +  PE   N+  L     RN T
Sbjct: 674 KKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKELFLRN-T 732

Query: 661 SLEKLPAGLSSMSS--VLYVNLCN 682
           +++ LP  + ++ S  +LY+  C+
Sbjct: 733 AIKDLPNSIGNLESLKILYLTDCS 756



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 50/339 (14%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++    ++ DC   E+ P+    +++L  L ++ TTI EL  S+  LS 
Sbjct: 922  IKDLPDSIGDLESLEILDLSDCSKFEKFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSG 981

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL--QTLPELPCNLGLLSARNCT--- 660
            ++ LI++   +L  +P++I  L  L  L +S C  L    +    CNLG L+   C    
Sbjct: 982  LRNLIIAECKSLRSLPDNISRLKFLETLILSGCSDLWEGLISNQLCNLGKLNISQCKMAG 1041

Query: 661  SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE 720
             + +LP+ L  + +    + C   K D + L  I    W+K +  E +  K     P N 
Sbjct: 1042 QILELPSSLEEIDA----HDCRS-KEDLSSLLWICHLNWLKSTTEELKCWKLRAIIPENS 1096

Query: 721  -IPKWFRHQSMGSSAT--LKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF------RHKS 771
              P+W R+Q++G+  T  L T       +   +    C  +       YF       H +
Sbjct: 1097 GNPEWIRYQNLGTEVTTELPTNWYEDPDFLGFVVSCVCRSIPTSDGHSYFLGCALKLHGN 1156

Query: 772  GEDDWDGNVYAVCCDWKRKSE--GHLYSWFLGKISYV-ESDHVFLGCN-SFGGEYFGPNY 827
            G +  D  ++   C     ++    ++ W+  KI+   E  H +   N SF G++     
Sbjct: 1157 GFEFKDKCLFDCQCKCHGINDLVDQVWVWWYPKIAIPKEHHHKYTHINASFRGKW----- 1211

Query: 828  DEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADHI 866
                                E+KKCGI+ ++A D  +H+
Sbjct: 1212 -------------------TEIKKCGINLIFAGDQQNHM 1231



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRL 603
           D+++ LP S+   ++    ++ DC   E+ P++   +++L+ L ++ T I++LP S+G L
Sbjct: 685 DNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKELFLRNTAIKDLPNSIGNL 744

Query: 604 SWVKRLILSNNSNLERIPE---SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             +K L L++ S  ++ PE   +++ L +L+ +  +  +   ++ +L  +L  L   +C+
Sbjct: 745 ESLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTAIKDLPDSIGDLE-SLETLDLSDCS 803

Query: 661 SLEKLPAGLSSMSSV 675
             EK P    +M S+
Sbjct: 804 KFEKFPEKGGNMKSL 818



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+    +    ++      E+ P++   +++LE L +K + I++LP+S+G L  
Sbjct: 828 IKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLES 887

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
           ++ L LS+ S  E+ PE   ++  L  LF+ +      + +LP ++G      +L   +C
Sbjct: 888 LETLDLSDCSRFEKFPEKGGNMKSLENLFLIN----TAIKDLPDSIGDLESLEILDLSDC 943

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
           +  EK P     M  +  +NL
Sbjct: 944 SKFEKFPEMKRGMKHLYKLNL 964



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+   ++     + DC   ++ P++   +++L+ L++  T I++LP+S+G L  
Sbjct: 734 IKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTAIKDLPDSIGDLES 793

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC---TSL 662
           ++ L LS+ S  E+ PE   ++  L  LF+     ++ LP    +LG L   +    +  
Sbjct: 794 LETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTA-IKDLPNSIGDLGSLEVLDLSYYSRF 852

Query: 663 EKLPAGLSSMSSVLYVNLCN 682
           EK P    +M S+  + L N
Sbjct: 853 EKFPEKGGNMKSLEVLILKN 872


>gi|332330339|gb|AEE43925.1| TIR-NBS-LRR resistance protein muRdr1A [Rosa multiflora]
          Length = 1119

 Score =  335 bits (858), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 258/746 (34%), Positives = 382/746 (51%), Gaps = 88/746 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  L   IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTGYLYHELQRRGIRTFRDDPQLERGTAISPKLHTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY VDPSHVR Q  SF   F    ++  
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKLG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
           +  K    W++ALT+AA L+G+ S   R E++LI EI   +  ++  +      ++ L G
Sbjct: 139 QGNKEVEGWRDALTKAASLAGWTSKDYRYETQLIREIVQALWSKVHPSLTVFGSSEKLFG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +EEI+ LL   +  V  + IWG+GGI K T A  V+ KIS  FE   F  NVR+  
Sbjct: 199 MDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTFARLVYQKISHQFEVCIFLANVRQVS 258

Query: 216 ETGGIKDLQKKLLSELSKDGN--MRNIESQLNRLAR----KKVRIVFDDVTSG------- 262
            T G+  LQ ++LS++ K+GN  + ++ S +  + R    K V +V DDV          
Sbjct: 259 ATHGLVCLQNQILSQILKEGNDHVWDVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLA 318

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTRD+ VL      K Y +K L   +A +LF   AF     +  + 
Sbjct: 319 GEKDCFGLRSRIIITTRDRHVLVTHDIEKPYELKTLGEDEALQLFSWKAFRKHEPEEDYA 378

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           + +   ++YA G+PLALK+LG +L  RS + W SA ++L+  P+ ++ E+LKIS+D L +
Sbjct: 379 KQSKNFVRYAGGLPLALKILGSFLYKRSLDSWSSAFQELKQTPNPKVFEILKISFDGLHE 438

Query: 374 SQKNVFLDIACF---------LEGEHRDEVISIFD----ASKSLINLDLFYRIRMHDLLR 420
            +K +FLDIACF         +E  +  E  S         KSL+ +     + MHDL++
Sbjct: 439 MEKKIFLDIACFPRLYGNESMIEQAYSSEFFSRIAIEVLVEKSLLTISFGNHVYMHDLIQ 498

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGR IVR+E+   PG R+RLW   DI+ V  +NTGTE  E I L ++K+  E   N  A
Sbjct: 499 EMGRRIVRQEN-EEPGGRSRLWLRNDIFHVFTENTGTEVTESIFLHLDKL-EEADWNLEA 556

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLVSLKMP 538
           FSKM KLR L  +  +      +L       +R L+W   P K L    E  +L  L +P
Sbjct: 557 FSKMCKLRLLYIHNLRLSLGPKYLPNA----LRFLKWSWYPSKYLPPGFEPAELAELSLP 612

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM---LERLPD--ELENLEYLTVKG-TT 592
            + ++ LW+ ++ L             + ID      L R PD   + NLE L ++G T 
Sbjct: 613 YSNIDHLWNGIKYLGK----------LKSIDLSYSINLRRTPDFTGIPNLEKLILEGCTN 662

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + E+  S+  L  ++   L N ++++ +P  + ++  L    +S C +L+ +PE      
Sbjct: 663 LVEIHPSIALLKRLRIWNLRNCTSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTK 721

Query: 653 LLS--ARNCTSLEKLPAGLSSMSSVL 676
            LS      T++EKLP+ +  +   L
Sbjct: 722 RLSKFCLGGTAVEKLPSSIELLPESL 747



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 33/285 (11%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
            E+P  +G LS +++L L  N N   +P SI  LSKL F+ + +C+RLQ LPELP    L 
Sbjct: 813  EIPNDIGSLSSLEKLELRGN-NFVSLPASIHLLSKLYFINVENCKRLQQLPELPARQSLR 871

Query: 654  LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD--GWMKHSLYE---ER 708
            ++  NCTSL+  P               NF  +  N LS +      +  +S+ +   E+
Sbjct: 872  VTTNNCTSLQVFPDPQVFPEPPNLSTPWNFSLISVNCLSAVGNQDASYFIYSVLKRWIEQ 931

Query: 709  GIKKSMYF-----PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
            G  +S  F     PG+EIP WF +QS+G S T K   P     +K I FA CA++V P+ 
Sbjct: 932  GNHRSFEFFKYIIPGSEIPDWFNNQSVGDSVTEKL--PSDECNSKWIGFAVCALIVPPSA 989

Query: 764  LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF 823
            +              +   V C W     G + +     +  + S H+FL   +      
Sbjct: 990  VP-------------DEIKVFCSWNAYGTGLIGTGTGSWLKQIVSGHLFLAVLASPSRRK 1036

Query: 824  GPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADHILK 868
             P   E    +   F   P      +KKCG   +Y  D  + I K
Sbjct: 1037 PP---ENCLEVKFVFKVDPC---SHLKKCGARALYEHDMEELISK 1075


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 272/820 (33%), Positives = 407/820 (49%), Gaps = 135/820 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD L+ RG  IS  LL  I+ S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYHELERRGIRTFRDDPLLERGTAISPELLTAIKQSRFAIV 78

Query: 61  IFSERYASSRW-----------------------------FFYRVDPSHVRKQSHSFGRH 91
           + S  YA+S W                              FY VDPSHVR Q  +F   
Sbjct: 79  VLSPNYATSTWCLLELSKILECMDERGQILPMHERGQILPIFYEVDPSHVRHQRGNFAEA 138

Query: 92  FSRLRKRFP---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT--- 145
           F    ++F    +K++ W++ALT+ A L+G+ S   R E+++I+EI  ++  ++  +   
Sbjct: 139 FQEHEEKFGVGNKKVEGWRDALTKVASLAGWTSKDYRYETQIIKEIVQELWSKVHPSLTV 198

Query: 146 FQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS 205
           F S  K L G++   EEI+ LL   +  V  + IWG+GG+ K T+A  V+ KIS  FE  
Sbjct: 199 FGSLEK-LFGMDTKWEEIDVLLDKKANDVRFIGIWGMGGMGKTTLARLVYQKISHQFEVC 257

Query: 206 YFALNVREAEETGGIKDLQKKLLSELSKDGN--MRNIESQLNRLAR----KKVRIVFDDV 259
            F  NVRE   T G+  LQ ++LS++ K+GN  + ++ S +  + R    K V +V DDV
Sbjct: 258 IFLANVREVSATHGLVCLQNQILSQILKEGNDQVWDVYSGITMIKRCFRNKAVLLVLDDV 317

Query: 260 TSG----------------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF 303
                              SR+IITTRD+ VL      K Y +K L   +A +LF   AF
Sbjct: 318 DQSEQLEHLAGEKDCFGLRSRIIITTRDRHVLVTHDIEKPYELKRLGEDEALQLFSWKAF 377

Query: 304 GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEV 363
                +  + E +   ++YA G+PLALK+LG +L  RS + W SA +KL+  P+  + E+
Sbjct: 378 RKHEPEEDYAEQSKSFVRYAGGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEI 437

Query: 364 LKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLF 410
           LKIS+D LD+ +K  FLDIACF      + +I    +S             KSL+ +   
Sbjct: 438 LKISFDGLDEMEKKTFLDIACFRRLYDNESMIEQVYSSGFCSRIAIEVLVEKSLLAISFG 497

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             + MHDL+R+MG EIVR+ES + PG R+RLW   DI+ V  KNTGTE  EGI L ++K+
Sbjct: 498 NHVYMHDLIREMGCEIVRQESCDEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLDKL 557

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
             E   N  AFSKM KL+ L  +  +      +L       +R L+W   P  +L     
Sbjct: 558 -EEADWNLEAFSKMCKLKLLYIHNLRLSLGPKYLPNA----LRFLKWSWYPSISLPPGFQ 612

Query: 529 AEKLVSLKMPCTKVEQLW-----------------DDVQRLPS----------------- 554
             +L  L +P + ++ LW                  ++ R P                  
Sbjct: 613 PAELAELSLPYSNIDHLWIGIKYLSNLKSIDLSYSTNLTRTPDFTGIPYLEKLILEGCIS 672

Query: 555 ------SLCTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKGTT-IRELPESLGRLSW 605
                 S+ + K    +   +CK ++ LP E  +E LE   V G + ++ +PE +G+   
Sbjct: 673 LVKIHPSIASLKRLKIWNFRNCKSIKSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQTKR 732

Query: 606 VKRLILSNNSNLERIPESIRHLSK------LTFLFISHCERLQTLPE--LPCNLGLLSAR 657
           + RL L   + +E++P SI HLS+      L+ + I      + L +  +  +LGL   +
Sbjct: 733 LSRLCLGGTA-VEKLP-SIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRK 790

Query: 658 NCTSLEKLPAGLSSMSSV--LYVNLCNFLKLD-PNELSEI 694
           +   L  L A L   SS+  L +N CN  + + PN++  +
Sbjct: 791 SPHPLTPLLASLKHFSSLTELKLNDCNLCEGELPNDIGSL 830



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 93/181 (51%), Gaps = 18/181 (9%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP  +G LS ++RL L  N N   +P SI  LSKL ++ + +C+RLQ LPE P   G L
Sbjct: 822 ELPNDIGSLSSLRRLELRGN-NFVSLPASIHLLSKLRYINVENCKRLQQLPE-PSARGYL 879

Query: 655 S--ARNCTSLEKLPAGLSSMSSVLYVNLC--NFLKLDPNE---------LSEIVKDGWMK 701
           S    NCTSL+  P  L  +  +L   LC  N L    N+         L  +V+ G M 
Sbjct: 880 SVNTNNCTSLQVFP-DLPGLCRLLAFRLCCSNCLSTVGNQDASYFIYSVLKRLVEVGMMV 938

Query: 702 HSLYEERGIK-KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF 760
           H     R      +  PG+EIP+WF +QS+G S T K  P     Y+K I FA CA++  
Sbjct: 939 HMPETPRCFPLPELLIPGSEIPEWFNNQSVGDSVTEKL-PSDACNYSKWIGFAVCALIGP 997

Query: 761 P 761
           P
Sbjct: 998 P 998


>gi|356560037|ref|XP_003548302.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1083

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 261/745 (35%), Positives = 373/745 (50%), Gaps = 104/745 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRG DTR  FT +L+  L  + I T IDDQ L RGD I+ +L   I+ S IAI
Sbjct: 11  IYDVFLSFRGLDTRHGFTGNLYKALDDRGIYTSIDDQELPRGDEITPALSKAIQESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     FY+VDPS VR Q  S+G   ++ +KRF
Sbjct: 71  TVLSQNYASSSFCLDELVTILHCKSEGLLVIPVFYKVDPSDVRHQKGSYGEAMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I  I  +V +++           
Sbjct: 131 KAKKEKLQKWRMALKQVADLSGYHFEDGDAY--EYKFIGSIVEEVSRKISRASLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  + E+  LL +GS+ +  +  I G+GG+ K T+A  V+N I+ HF+ S F  NVR
Sbjct: 189 VGLESQVTEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALEVYNLIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS----- 261
           E     G+K LQ  LLS+L  + ++     Q       +RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASTIQHRLQRKKVLLILDDVNKREQLK 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L +  A +L    AF  + +D 
Sbjct: 309 AIVGRPDWFGPGSRVIITTRDKHLLKCHEVERTYEVKVLNHNAALQLLTWNAFKREKIDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+PLAL+++G  + G+S   WESA+   + IP+ EI E+LK+S+D+
Sbjct: 369 SYEDVLNRVVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYKRIPNDEILEILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEV----ISIFD----------ASKSLINLDLFYRIRMH 416
           L + QKNVFLDIA  L+G    EV     S++D            KSLI +     + MH
Sbjct: 429 LGEEQKNVFLDIAFCLKGCKLTEVEHMLCSLYDNCMKHHIDVLVDKSLIKVK-HGIVEMH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--I 474
           DL++ +GREI R+ S   PGKR RLW  KDI  VLK NTGT  IE I LD +   +E  +
Sbjct: 488 DLIQVVGREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGTSKIEIICLDFSISYKEETV 547

Query: 475 HMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
             N  AF KM  L+ L     K +K      EG     +R LEW + P   L  N     
Sbjct: 548 EFNENAFMKMENLKILIIRNGKFSKGPNYFPEG-----LRVLEWHRYPSNFLPSNFDPIN 602

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           LV  K+P + ++           S          +   CK L ++PD             
Sbjct: 603 LVICKLPDSSIKSF-----EFHGSSKKLGHLTVLKFDRCKFLTQIPD------------- 644

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CN 650
            + +LP        ++ L   +  +L  + +SI  L KL  L    C +L + P L   +
Sbjct: 645 -VSDLPN-------LRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKLTSFPPLNLTS 696

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSV 675
           L  L   +C+SLE  P  L  M ++
Sbjct: 697 LETLQLSSCSSLEYFPEILGEMENI 721



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 59/143 (41%), Gaps = 32/143 (22%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           R + V  L LS N N   +PE  + L  L  L +S CE LQ +  LP  L    ARNC S
Sbjct: 819 RFAHVGYLNLSGN-NFTILPEFFKELQFLRTLDVSDCEHLQEIRGLPPILEYFDARNCVS 877

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
                   SS +S+L                       +   L+E  G +    FPG  I
Sbjct: 878 FT------SSSTSML-----------------------LNQELHEAGGTQ--FVFPGTRI 906

Query: 722 PKWFRHQSMGSSATLKTRPPRPA 744
           P+WF  QS G S++   R   PA
Sbjct: 907 PEWFDQQSSGPSSSFWFRNKFPA 929


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 263/785 (33%), Positives = 399/785 (50%), Gaps = 114/785 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR+NFTSHL   L  K +  FIDD+L RG  IS+SLL +I+ S I+III
Sbjct: 23  YDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLERGGQISESLLKSIDGSKISIII 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRKR 98
           FS+ YASS W                      FY+VDPS VRKQ+  FG   ++    + 
Sbjct: 83  FSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDPSEVRKQTGGFGEALAKHEANEL 142

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT-FQSKNKGLVGVE 157
              K++ WK ALT AA LSG+D    + E+ LI ++  +VL  L+ T      K  VG++
Sbjct: 143 MTNKVQPWKEALTTAASLSGWDLATRKNEADLIHDLVKEVLSILNQTQLLHVAKHPVGID 202

Query: 158 CSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
             +  +E L      +GV  + I G+GGI K T+A A++NKI+  FE   F  NVRE  E
Sbjct: 203 SQLRAVEELASHDVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETLE 262

Query: 216 ETGGIKDLQKKLLSELSKD-----GNMRNIESQL-NRLARKKVRIVFDDVTS-------- 261
           +   +  LQ+KLLSE+ KD     GN+   ++ + +RL  KKV I+ DDV          
Sbjct: 263 QFKDLVQLQEKLLSEILKDNAWKVGNVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDALV 322

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS++I TTRD+ +L+N   +  Y ++ L    + +LF   AF  +H  ++++
Sbjct: 323 GERDWFGRGSKIIATTRDRHLLENHSFDIVYPIQLLDPKKSLELFSLHAFKQNHPSSNYV 382

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+  A+ Y +G+PLAL +LG  L  R +++W+S + +LE      +E V +I +  L +
Sbjct: 383 DLSKFAVSYCKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEAVFQIGFKELHE 442

Query: 374 SQKNVFLDIACFLEGE---HRDEVISIFDASKS-----LINLDLFY----RIRMHDLLRD 421
             K +FLDI+CF  GE   +  +V+   D +       L++L L      +I+MHDL++ 
Sbjct: 443 RVKEIFLDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHDLIQQ 502

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+ IVR ES   P KR+RLW  +   ++LK+ +GT+A++ I LD++       + + AF
Sbjct: 503 MGQTIVRHESF-EPAKRSRLWEAEGAIKILKEKSGTKAVKAIKLDLHYKPWLKIVEAEAF 561

Query: 482 SKMPKLRFLRF----YGDKNKCMVSHLEGVPFAEVRHLEWP-----QCPLKTLNICAEKL 532
             M  LR L      Y  KN       E +P   ++ +EW      Q    + ++   +L
Sbjct: 562 RNMKNLRLLILQRVAYFPKNI-----FEYLP-NSLKWIEWSTFYVNQSSSISFSVKG-RL 614

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L M     +Q      R+    C  KT    ++  C  L+  P+     NLE L ++G
Sbjct: 615 VGLVMKGVVNKQ-----PRIAFENC--KTMKHVDLSYCGTLKETPNFSATLNLEKLYLRG 667

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
            T+++ + ES+  LS +  L L    NLE+ P S   L  L  L +S C +++ +P+L  
Sbjct: 668 CTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSA 727

Query: 650 N---------------------------LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           +                           L +L    C +LE+LP       S+  +NL N
Sbjct: 728 SSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRN 787

Query: 683 FLKLD 687
            L L+
Sbjct: 788 CLNLE 792



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 524 TLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL 583
           +L I  E + SL    T    L  ++++LPSSL   K+  +    +C  LE+LP+  EN+
Sbjct: 813 SLRIIHESIGSLDKLITLQLDLCHNLEKLPSSL-KLKSLDSLSFTNCYKLEQLPEFDENM 871

Query: 584 EYLTV---KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           + L V    GT IR LP S+G L  ++ L L++ +NL  +P  I  L  L  L +  C +
Sbjct: 872 KSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSK 931

Query: 641 LQTLP 645
           L   P
Sbjct: 932 LDMFP 936



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 8/176 (4%)

Query: 524 TLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELE 581
           +L +  E + SL    T   +  D++++ PSS    K+     +  C+ +E +PD     
Sbjct: 670 SLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASS 729

Query: 582 NLEYLTVKGTT-IRELPESLGR-LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           NL+ L ++    +R + +S+GR L  +  L L    NLER+P S      L  L + +C 
Sbjct: 730 NLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRNCL 789

Query: 640 RLQTLPE--LPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNEL 691
            L+ + +  +  NL +L    C SL  +   + S+  +  L ++LC+ L+  P+ L
Sbjct: 790 NLEEIIDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKLPSSL 845



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 25/136 (18%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLS 604
           +++RLP+S   FK+     + +C  LE + D     NLE L +    ++R + ES+G L 
Sbjct: 766 NLERLPTSHLKFKSLKVLNLRNCLNLEEIIDFSMASNLEILDLNTCFSLRIIHESIGSLD 825

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            +  L L    NLE++P S++  S                      L  LS  NC  LE+
Sbjct: 826 KLITLQLDLCHNLEKLPSSLKLKS----------------------LDSLSFTNCYKLEQ 863

Query: 665 LPAGLSSMSSVLYVNL 680
           LP    +M S+  +NL
Sbjct: 864 LPEFDENMKSLRVMNL 879


>gi|356561802|ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 253/757 (33%), Positives = 386/757 (50%), Gaps = 110/757 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L++ LS + I TFID++ L RGD I  +L+  I+ S +AI+
Sbjct: 9   YDVFLSFRGSDTRYGFTGNLYNALSDRGIHTFIDEEELQRGDEIRPALVEAIKQSRMAIL 68

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY VDP HVR QS S+G   +   +RF
Sbjct: 69  VFSKNYASSSFCLDELVKIMECVKAKGRLIFPIFYDVDPCHVRHQSGSYGEALAMHEERF 128

Query: 100 P----------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQS 148
                      E++++WK AL +AAD+SG    +    E + I +I  ++  +++ T   
Sbjct: 129 TSSKENLKENMERLQKWKMALNQAADVSGKHYKLGNEYEHEFIGKIVKEISNKINRTPLH 188

Query: 149 KNKGLVGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
                VG+E  ++ ++SLL   S+ GV  + I+GIGG+ K T+A AV+N I+  F+G  F
Sbjct: 189 VADYPVGLESRVQTVKSLLEFESDTGVHIVGIYGIGGMGKTTLARAVYNSIADQFKGLCF 248

Query: 208 ALNVREAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVT- 260
             +VRE     G+  LQ+ LLSE+  + +++       I    +RL RKK+ ++ DDV  
Sbjct: 249 LDDVRENATKHGLIHLQEMLLSEIVGEKDIKIGSVSKGISIIKHRLQRKKILLILDDVDK 308

Query: 261 ---------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                          SGSRVI+TTRDK +L +   ++KY +++L   ++ +L C  AF  
Sbjct: 309 LEQLRATVGGPNWFGSGSRVIVTTRDKHLLASHGVDRKYEVEDLNEEESLELLCWNAFKD 368

Query: 306 DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLK 365
           D +D  + +++ +A+ YA G+PLAL+V+G  L G+  + WESA+ + + IP+  I+++LK
Sbjct: 369 DKVDPCYKDISSQAVAYASGLPLALEVVGSLLFGKGIKEWESALEQYKKIPNKRIQDILK 428

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY 411
           +SY++L++ Q+ +FLDIAC L+G    EV  I  A               KSLI +    
Sbjct: 429 VSYNALEEDQQKIFLDIACCLKGYELAEVEDILCAHYGVCMKYGIGVLVDKSLIKIK-NG 487

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
           R+ +H+L+  MG+EI R+ES    GK  RLW HKDI QVL +NTGT  IE ISLD     
Sbjct: 488 RVTLHELIEVMGKEIDRQESPKELGKHRRLWFHKDIIQVLAENTGTSEIEIISLDFPLFE 547

Query: 472 RE----IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL-- 525
            +    +  +  AF KM  L+ L           +HL       +R LEW   PL+ L  
Sbjct: 548 EDEEAYVEWDGEAFKKMENLKTLIIRNSHFSKGPTHLPN----SLRVLEWWTYPLQDLPT 603

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEY 585
           +  + KL   K+P +    L                           L  +  +  NL  
Sbjct: 604 DFHSNKLAICKLPRSCFTSL--------------------------ELSGISKKFMNLTV 637

Query: 586 LTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L   GT  + ++P+ +  L  + +L      NL  I +S+  L KL  L    C +L + 
Sbjct: 638 LNFDGTECLTQIPD-ISSLQNLVKLTFECCENLVAIHDSVGFLDKLKILSAFGCGKLMSF 696

Query: 645 PELP-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           P +   +L  L   +C+SLE  P  L  M ++  + L
Sbjct: 697 PPIKLISLEQLDLSSCSSLESFPEILGKMENITQLEL 733



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 91/264 (34%), Gaps = 62/264 (23%)

Query: 502 SHLEGVP-----FAEVRHLEWPQCPLKTLNICAEKLVSLK----MPCTKVEQLWDDVQRL 552
           S LE  P        +  LE    PLK        L  L+    + C  V+        L
Sbjct: 713 SSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDCGNVQ--------L 764

Query: 553 PSSLCTFKTPITFEIIDCKML---------ERLPDELENLEYLTVKGTTIRE--LPESLG 601
           P S+           + CK L         E +     N+  L + G  + +   P  L 
Sbjct: 765 PISIVMLPELAQIFALGCKGLLLPKQDKDEEEVSSMSSNVNCLCLSGCNLSDEYFPMVLA 824

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
             S VK L LS N N   +PE I+    L  L + +CE LQ +  +P NL   SA NC S
Sbjct: 825 WFSNVKELELSCN-NFTFLPECIKECHSLILLNLDNCEHLQEIRGIPPNLEYFSAGNCKS 883

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY-FPGNE 720
           L                + C    L   EL E                   +M+  PG  
Sbjct: 884 L----------------SFCCTAMLLNQELHE----------------TGNTMFCLPGTR 911

Query: 721 IPKWFRHQSMGSSATLKTRPPRPA 744
            P+WF  QS+G S +   R   P 
Sbjct: 912 SPEWFEQQSIGPSLSFWFRNKFPV 935


>gi|224057836|ref|XP_002299348.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222846606|gb|EEE84153.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/516 (39%), Positives = 296/516 (57%), Gaps = 65/516 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R  FT HL+       I TF D +++ RG+ IS+ L   I+ S I+++
Sbjct: 1   YDVFLSFRGEDNRKTFTDHLYTAFVQAGIHTFRDQNEIPRGEEISKHLHKAIQESKISVV 60

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF + F R  + 
Sbjct: 61  VFSKGYASSRWCLNELVEILESKNRKTDQIVLPIFYDIDPSEVRKQTGSFAKAFHRHEEA 120

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
           F EK+K W+ AL EA +LSG++ N +    ESKLI+EI  DVL +LD    +    LVG+
Sbjct: 121 FTEKVKEWRKALEEAGNLSGWNLNDMENGHESKLIQEIVKDVLNKLDPKHINVATHLVGI 180

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AE 215
           +  +  I   L   ++ VC + I G+ GI K +IA  VFN+    FEGS F  N+ E +E
Sbjct: 181 DPLVLAISDFLSTATDEVCIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSE 240

Query: 216 ETGGIKDLQKKLLSELSKDG--NMRNIESQL----NRLARKKVRIVFDDVT--------- 260
           ++ G+  LQ++LL ++ K    N+ N+   +     R+  K+V +V DDV          
Sbjct: 241 QSNGLVLLQEQLLHDILKQNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNALM 300

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSRVIITT+D+ +L     ++ YR++EL   ++ +LF   AFG       ++
Sbjct: 301 GERSWFGPGSRVIITTKDEHLLLK--VDRTYRVEELKRDESLQLFSWHAFGDTKPAKDYV 358

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL++  + Y  G+PLAL+VLG  L G+++  W+  + KL  IP+ EI++ L+IS+DSLDD
Sbjct: 359 ELSNDVVDYCGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKLRISFDSLDD 418

Query: 374 SQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
            Q +N FLDIACF  G +++ V  + +A               +SLI +D F +I MHDL
Sbjct: 419 HQLQNTFLDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDL 478

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           LRDMGR+I+ KES  HPGKR+R+W  +D + VL K+
Sbjct: 479 LRDMGRDIIHKESPGHPGKRSRIWQREDAWNVLNKH 514


>gi|357518005|ref|XP_003629291.1| Resistance protein [Medicago truncatula]
 gi|355523313|gb|AET03767.1| Resistance protein [Medicago truncatula]
          Length = 1039

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 263/742 (35%), Positives = 375/742 (50%), Gaps = 102/742 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  K I TFIDD+ L RG  I+ SLL  IE S IAII
Sbjct: 20  YDVFLSFRGLDTRYGFTGNLYKALYDKGIHTFIDDEELQRGHEITPSLLEAIEESRIAII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS +                      FY VDPS VRKQ+ S+G   + L +RF
Sbjct: 80  VLSKNYASSSFCLHELVKILDCIKGKGRLVWPIFYDVDPSDVRKQTGSYGEALAMLGERF 139

Query: 100 PEK-MKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            +  ++ WKNAL + A+LSG+   +    E + I +I   V K+++          VG+E
Sbjct: 140 NDNNLQIWKNALQQVANLSGWHFKIGDGYEYEFIGKIVEHVSKKMNRVALPVADYPVGLE 199

Query: 158 CSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             + EI SLL IGS+  V  + I G GGI K T+A AV+N I+ HFE   F  NVRE   
Sbjct: 200 PQVLEINSLLDIGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEALCFLENVRENSN 259

Query: 217 TGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVT---------- 260
             G++ LQK LLSE   +  ++       I    +RL +KKV ++ DDV           
Sbjct: 260 KHGLQHLQKILLSETLGEKKIKLTSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEALVG 319

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSRVIITTRDK +L +    + Y +  L   DA +L    AF  +    S+ +
Sbjct: 320 GFYWLGSGSRVIITTRDKHLLSSHGVKRTYEVNVLNEKDALRLLTWKAFKTEVFHPSYFD 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  +A+ YA G+PLAL V+G  L G++ + WESA+ + EIIP+ EI+ +LK+S+D+L++ 
Sbjct: 380 VLKRAVGYASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFDALEED 439

Query: 375 QKNVFLDIACFLEGEH------RDEVISIFDA----------SKSLINLDLFYRIRMHDL 418
           +K+VFLD+AC   G+        + + + FDA           KSLI +    +  +HDL
Sbjct: 440 EKSVFLDMACIYIGKEYQLANMENMLYAHFDACMKYHIGVLVEKSLIKISWTGKYIVHDL 499

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + DM +EIVR ES + PGKR+RLW H+DI QVL+ N+GT AI+ I L   + + E+ ++ 
Sbjct: 500 IGDMAKEIVRLESPDEPGKRSRLWFHEDIIQVLEDNSGTSAIKSIYL--MECDDEVELDE 557

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF  M  L+ L   G        HL       +R +EW   P +    +   +KL   +
Sbjct: 558 SAFKNMKNLKTLIIKGGHFSKGPKHLPN----SLRVVEWWNYPSEYFPYDFNPKKLAIFE 613

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIR 594
           +P + +  L     +L   +  F         D + L  +PD   L NLE  + K     
Sbjct: 614 LPKSSLMSL-----KLTDLMKKFLNMKILNFDDAEFLTEIPDTSSLLNLELFSFKRC--- 665

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CNLGL 653
                                NL  I ES+  L KL  L    C +L+  P +   +L  
Sbjct: 666 --------------------KNLTTIHESVGFLEKLKVLSAQGCRKLRKFPPIKLISLEE 705

Query: 654 LSARNCTSLEKLPAGLSSMSSV 675
           L+   CT+LE  P  L  M ++
Sbjct: 706 LNVSFCTNLESFPEILGKMENM 727


>gi|357469143|ref|XP_003604856.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505911|gb|AES87053.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2019

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 251/749 (33%), Positives = 379/749 (50%), Gaps = 84/749 (11%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
            MYDVFLSFRGED+R  F SHLH  L    I  F DD ++ RGD IS SL   I  S I I
Sbjct: 486  MYDVFLSFRGEDSRAKFISHLHSSLENAGIHVFKDDFKIQRGDQISISLFRAIGQSRICI 545

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            ++ S+ YA+SRW                      FY VDPS VR Q   FG+ F  L  +
Sbjct: 546  VVLSKNYANSRWCMLELENIMEIGRNRGLVVVPVFYEVDPSEVRHQKGHFGKGFDDLISK 605

Query: 99   FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
                     N   E  D+ G   N    ES  +  I + V + LD T     +  VGVE 
Sbjct: 606  TSVDESTKSNWRRELFDICGISGN----ESADVNSIVSHVTRLLDRTQLFVAEHPVGVES 661

Query: 159  SIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++    LL I  SE V  L IWG+G   K TIA +++N+I   F+G  F LN+RE  ET
Sbjct: 662  RVQAATKLLKIQKSEDVLLLGIWGMG---KTTIAKSIYNEIGSKFDGKSFLLNIREFWET 718

Query: 218  GGIK-DLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS--------- 261
            G  +  LQ+++L ++ K  +  +R+IES  N    RL+  +V +V DDV           
Sbjct: 719  GTNQVSLQQQVLCDVYKTTSFKIRDIESGKNTLKERLSDNRVLLVLDDVNELDQIKALCG 778

Query: 262  -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-LDASHI 313
                   GSR+IITTRD ++L++C  ++ Y +KE+   ++ +LF   AF     ++    
Sbjct: 779  SRKWFGPGSRIIITTRDMRLLRSCRVDQVYEIKEMDEIESLELFSWHAFKQPSPIEDFAT 838

Query: 314  ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
             LTD  + Y+   PLAL+VLG YL G     W+  + KL+ IPH E+++ LK+S+D L D
Sbjct: 839  HLTD-MVAYSGRFPLALEVLGSYLSGCKITEWQKVLEKLKCIPHDEVQKKLKVSFDGLKD 897

Query: 374  -SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
             + K +FLDIACF  G  +++ I I +               +SL+ +D   ++RMHDLL
Sbjct: 898  VTDKQIFLDIACFFIGMDKNDAIQILNGCRFFADIGIKVLVERSLVTVDNRNKLRMHDLL 957

Query: 420  RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            RDMGR+I+ +ES   P  R+RLW  +D   VL K+ GT A++G+ L+   +  ++ +N+ 
Sbjct: 958  RDMGRQIIYEESPFDPENRSRLWRREDALDVLSKHKGTNAVKGLVLEF-PIKNKVCLNTK 1016

Query: 480  AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP--LKTLNICAEKLVSLKM 537
            AF KM KLR LR  G K      +L      E+R L W   P            LV +++
Sbjct: 1017 AFKKMNKLRLLRLGGVKLNGDFKYLS----EELRWLCWHGFPSTYTPAEFQQGSLVVVEL 1072

Query: 538  PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIREL 596
              + ++Q+W   + L  +L       +  + +      +P    NLE + +KG  ++  +
Sbjct: 1073 KYSNLKQIWKKCKML-ENLKILNLSHSLNLTETPDFSYMP----NLEKIVLKGCPSLSTV 1127

Query: 597  PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
              S+G L  +  + L++ + L ++P+SI  L  L  L +S C ++  L E    +  L  
Sbjct: 1128 SHSIGSLHKLLLINLTDCTGLRKLPKSIYKLKSLETLILSGCSKINKLEEDLEQMESLKT 1187

Query: 657  --RNCTSLEKLPAGLSSMSSVLYVNLCNF 683
               + T++ K+P  +  + S+ Y++   F
Sbjct: 1188 LIADKTAITKVPFSIVRLKSIGYISFRGF 1216



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 218/490 (44%), Gaps = 98/490 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKS--IKTFIDDQLIRGDNISQSL--------LGT 51
           ++V+LSF  +D   +F   ++  LS+K+  +  + + +L  GD I   L        L  
Sbjct: 26  FNVYLSFCAKDA-GSFAMSIYKTLSIKAGFVVFWEEKRLGYGDRIVTPLEPVRCLQELKK 84

Query: 52  IEASCIAIIIFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRF--------PEKM 103
           I   C      +        F   V PS    ++  FG  F     R          +K 
Sbjct: 85  ITECCRT----TSGLTVLPLFHDHVYPSCGILKTCMFGDSFHNFVDRILMQETSHEGDKF 140

Query: 104 KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL-----VGVEC 158
             W   +++A   SG    V  P  +   E  +++++R+     +K   L     + +  
Sbjct: 141 ISWVATISKATTYSGPIDLVQIPPDRNKSEYIDNLVERVTRVISNKRGWLNCLNTMSINS 200

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++++  LL   S+    + IWG+ GI K TIA A++++I  +F   +F           
Sbjct: 201 RVQDVIQLLK-QSKSPLLIGIWGMAGIGKTTIAQAIYHQIGPYFADKFF----------- 248

Query: 219 GIKDLQKKLLSELSK--DGNMRNIESQLN----RLARKKVRIVFDDVTS----------- 261
               LQ+KL+ ++ +  +  +R IES       R   K++ +V D+V             
Sbjct: 249 ----LQQKLIFDIDQGTEIKIRKIESGKQILKYRFRHKRILLVLDNVDKLEQLNALCENP 304

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GS++IIT+R++ +LK    +  YR+KEL  +++ +LF    +G            
Sbjct: 305 EWFGVGSKIIITSRNRHLLKEHGFDHIYRVKELDGSESLELF---NYG------------ 349

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI--IPHVEIEEVLKISYDSLDDS 374
              + Y+ G P ALK +G +L G+    W+  +R+ +   +P  EI E L++S++ L D 
Sbjct: 350 --VVAYSGGWPPALKEVGNFLHGKELHKWKDVLRRYQTFDLPSPEILEDLEMSFNDLSDE 407

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRD 421
           +K++FLDIA F  G ++++V+   + S             KS + +D    + M  +L+ 
Sbjct: 408 EKHIFLDIAYFCIGMNQNDVLQTLNRSTQCAALQINLLEDKSFLTIDKKNNLEMQVVLQA 467

Query: 422 MGREIVRKES 431
           M ++I++ E+
Sbjct: 468 MAKDIIKSET 477



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 195/468 (41%), Gaps = 100/468 (21%)

Query: 41   GDN-ISQSLLGTIEASCIAIIIFSERYASSRWFF---------YRV-------------- 76
            GD  +  S+L  I  S + ++I S+ Y  SRW           YR               
Sbjct: 1553 GDQEVPTSVLNVIADSKVVVVILSKNYTHSRWCLQELEKITQCYRTKDGPVVLPVFYDGV 1612

Query: 77   -DPSHVRKQSHSFGRHFSRLRKRFPEKMK----------RWKNALT-EAADLSGFDSNVI 124
              PS +  Q   +G  F     R   K K           W   ++ EA+  +       
Sbjct: 1613 HSPSRIL-QEDMYGEAFHDFLDRISMKEKTSSEDEDKFMSWVAEISNEASKYAALAFLRY 1671

Query: 125  RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKL--RIWGI 182
             P     E I + V  +      SK +    +E      + ++ +  +  C L   IWG+
Sbjct: 1672 GPNQNRGEHITHVV--KCATLIVSKKRASFHIESIHSRAQDVIQLLKQSKCPLLVGIWGM 1729

Query: 183  GGISKITIAGAVFNKISRHFEGSYFALNVRE--AEETGGIKDLQKKLLSELSKDGNMRNI 240
             GI K TIA  +++K    F+G      +     ++  G+  LQ+ L    S   N  +I
Sbjct: 1730 TGIGKSTIANVIYHKFGPFFQGFCLLKTISGICKKKIHGLTSLQESLAEFYS---NKLSI 1786

Query: 241  ESQLNRLAR----KKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWA 280
            ES  N + R    K+V IV DDV                 +GS++IITTRD+++LK    
Sbjct: 1787 ESGKNIIKRSFQHKRVLIVLDDVDKLDQLKVLCGSRYWFGAGSKIIITTRDRRLLKQHGV 1846

Query: 281  NKKYRMKELVYADAHKLFCQWAFGGDHLDASHI----ELTDKAIKYAQGVPLALKVLGCY 336
            +  Y +KEL   ++  L   W  GG  L  +      E + + +  + G+PL   VL   
Sbjct: 1847 DHIYSVKELNERESLALL-NW--GGYSLPTNTQQYFGEPSRELVTNSWGLPLCKNVL--- 1900

Query: 337  LCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVIS 396
                       ++ +L I P   ++E L+ S+  L D +K VFLDIACF  G+ +++V  
Sbjct: 1901 ----------KSLERLSI-PAPRLQEALEKSFRDLSDEEKQVFLDIACFFVGKKQNDVQQ 1949

Query: 397  IFDAS-------------KSLINLDLFYRIRMHDLLRDMGREIVRKES 431
            I + S             KSLI +D   +I+MH +L+ M R I+++ES
Sbjct: 1950 ILNKSKQYVALQISLLEDKSLITIDEDNKIQMHVMLQAMARGIIKRES 1997


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 268/771 (34%), Positives = 395/771 (51%), Gaps = 98/771 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR  FT HLH  L  K I+TF DD+ L RG+ I  S+L  IE S + I+
Sbjct: 16  WDVFLSFRGEDTRFTFTDHLHSALRQKRIRTFRDDEGLDRGEEIGSSILKAIEESRMYIV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA S+W                      FY V+PS VR Q+ SFG  F + +K  
Sbjct: 76  VFSNTYAHSKWCLDELAKIMECKIQKGQTVVPVFYHVEPSDVRNQTGSFGEAFDKYQKVP 135

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K+ RWK AL  AA+LSG+       ES+ I+ I  ++L R +    S +  LVG+E  
Sbjct: 136 EHKLMRWKAALRHAANLSGWHVQH-GYESQAIQRIVQNILSR-NLKLLSASDKLVGMERH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
            +E+ SL+ I S  V  + I GI GI K T+A AV+N+I   F+G+ F  N    E    
Sbjct: 194 RKEMASLISIDSNDVRMIGINGIDGIGKTTLAKAVYNQIVHQFDGASFLSNFSSHEMNLL 253

Query: 220 I-----------KDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
                       +D+ +  ++++SK  ++       + L  KKV +V DDV         
Sbjct: 254 QLQKQLLRDILGEDIPR--ITDISKGAHVIR-----DMLWSKKVLVVLDDVDGTGQLEFL 306

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+I+T+R K +L     +  Y +KEL   +A +LF   AF  +      +
Sbjct: 307 VINRAFGPGSRIIVTSRHKYLLAGYGLDALYEVKELNCKEAIQLFSLHAFHMNSPQKGFM 366

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   + Y +G+P+AL+VLG +L G+ K  WES +++LE  P+ +I+ VL   +  LD 
Sbjct: 367 NLSRWIVDYCKGLPIALEVLGSHLFGKKKFEWESVLQRLEKRPNKQIQNVLMRGFQGLDG 426

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
             + +FLD+ACF +GE  D V  I +A               SLI++ L  ++ MHDL++
Sbjct: 427 CHREIFLDVACFFKGEDLDFVERILEACNFYSKLGIKVLTDNSLISI-LDNKLLMHDLIQ 485

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
             G EIVR++    PGK +RLW  +D+Y VL  NTGT+ IEGI L+M  V+ EIH+ S A
Sbjct: 486 KSGWEIVREQYHTEPGKWSRLWDPEDVYHVLTTNTGTKRIEGIFLNMF-VSNEIHLTSDA 544

Query: 481 FSKMPKLRFLRFYGD-KNKCMVS------HLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           F KM +LR LR Y + +N  +VS      H    P  E+R+L W    L++L  N    K
Sbjct: 545 FKKMTRLRLLRVYQNVENNSIVSNTVHLPHDFKFPSHELRYLHWDGWTLESLPSNFDGWK 604

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           LV L +  + ++ LW   + LP  L       +  +++C  L   P     +E L + G 
Sbjct: 605 LVELSLKHSSLKHLWKKRKCLP-KLEVINLGNSQHLMECPNLSFAP----RVELLILDGC 659

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIP--ESIRHLSKLTFLFISHCERLQTLPE--- 646
           T   LPE    ++ +KRL + N  N +++    SI  L  L  L +S C +L   PE   
Sbjct: 660 T--SLPEVHPSVTKLKRLTILNMKNCKKLHYFPSITGLESLKVLNLSGCSKLDKFPEIME 717

Query: 647 -LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
            + C   LL   + TSL++LP  +  +  +  +NL  C  L+  PN +  +
Sbjct: 718 VMECLQKLL--LDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSL 766



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 35/297 (11%)

Query: 580  LENLEYLTVKGTTI--RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +L+YL + G  +  R + ++LG LS+++ L LS N NL  +P  +  LS L  L ++ 
Sbjct: 859  LYSLKYLDLSGCNLTDRSINDNLGHLSFLEELNLSRN-NLVTVPAEVNRLSHLRVLSVNQ 917

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKL-------PAGLSSMSSVLYVN--LCNFLKLDP 688
            C+ LQ + +LP ++ LL A +C SLE L       P  LSS S +  V   L N   L  
Sbjct: 918  CKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQSPQYLSSSSCLRPVTFKLPNCFALAQ 977

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
            +  + I++   ++ +   E  I+ S+  PG+ IP+WF+H S+GSS T++     P  +NK
Sbjct: 978  DNGATILEK--LRQNFLPE--IEYSIVLPGSTIPEWFQHPSIGSSVTIEL---PPNWHNK 1030

Query: 749  -LISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL---YSWFLGKIS 804
              + FA C+V               ED+       VCC+++ +   +L    SW      
Sbjct: 1031 DFLGFALCSVFSLE-----------EDEIIQGSGLVCCNFEFREGPYLSSSISWTHSGDR 1079

Query: 805  YVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             +E+DH++L     G +   P     +     + +F        VK CGIH +YA+D
Sbjct: 1080 VIETDHIWLVYQP-GAKLMIPKSSSLNKFRKITAYFSLSGASHVVKNCGIHLIYARD 1135



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLS 604
           ++ LP S+   K      +  CK L  LP+    L +LE L V G + + +LPE LGRL 
Sbjct: 732 LKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQ 791

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           ++ +L  ++ + + + P S+ HL  L  L    C+
Sbjct: 792 FLMKL-QADGTAITQPPLSLFHLRNLKELSFRGCK 825


>gi|27764539|gb|AAO23069.1| R 4 protein [Glycine max]
          Length = 895

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 260/745 (34%), Positives = 373/745 (50%), Gaps = 104/745 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRG DTR  FT +L+  L  + I T IDDQ L RGD I+ +L   I+ S IAI
Sbjct: 11  IYDVFLSFRGLDTRHGFTGNLYKALDDRGIYTSIDDQELPRGDEITPALSKAIQESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     FY+VDPS VR Q  S+G   ++ +KRF
Sbjct: 71  TVLSQNYASSSFCLDELVTILHCKSEGLLVIPVFYKVDPSDVRHQKGSYGEAMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I  I  +V +++           
Sbjct: 131 KAKKEKLQKWRMALKQVADLSGYHFEDGDAY--EYKFIGSIVEEVSRKISRASLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  + E+  LL +GS+ +  +  I G+GG+ K T+A  V+N I+ HF+ S F  NVR
Sbjct: 189 VGLESQVTEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALEVYNLIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS----- 261
           E     G+K LQ  LLS+L  + ++          +  +RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASTIQHRLQRKKVLLILDDVNKREQLK 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L +  A +L    AF  + +D 
Sbjct: 309 AIVGRPDWFGPGSRVIITTRDKHLLKCHEVERTYEVKVLNHNAALQLLTWNAFKREKIDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+PLAL+++G  + G+S   WESA+   + IP+ EI E+LK+S+D+
Sbjct: 369 SYEDVLNRVVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYKRIPNDEILEILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEV----ISIFD----------ASKSLINLDLFYRIRMH 416
           L + QKNVFLDIA  L+G    EV     S++D            KSLI +     + MH
Sbjct: 429 LGEEQKNVFLDIAFCLKGCKLTEVEHMLCSLYDNCMKHHIDVLVDKSLIKVK-HGIVEMH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--I 474
           DL++ +GREI R+ S   PGKR RLW  KDI  VLK NTGT  IE I LD +   +E  +
Sbjct: 488 DLIQVVGREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGTSKIEIICLDFSISYKEETV 547

Query: 475 HMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
             N  AF KM  L+ L     K +K      EG     +R LEW + P   L  N     
Sbjct: 548 EFNENAFMKMENLKILIIRNGKFSKGPNYFPEG-----LRVLEWHRYPSNFLPSNFDPIN 602

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           LV  K+P + ++           S          +   CK L ++PD             
Sbjct: 603 LVICKLPDSSIKSF-----EFHGSSKKLGHLTVLKFDRCKFLTQIPD------------- 644

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CN 650
            + +LP        ++ L   +  +L  + +SI  L KL  L    C +L + P L   +
Sbjct: 645 -VSDLPN-------LRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKLTSFPPLNLTS 696

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSV 675
           L  L   +C+SLE  P  L  M ++
Sbjct: 697 LETLQLSSCSSLEYFPEILGEMENI 721



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 15/131 (11%)

Query: 564 TFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERI 620
           T ++  C  LE  P+   E+EN+  L + G  I+ELP S   L+ ++ L LS    + ++
Sbjct: 699 TLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLRLLALSG-CGIVQL 757

Query: 621 PESIRHLSKLTFLFISHCERLQTLPE----------LPCNLGLLSARNCTSLEK-LPAGL 669
           P S+  + +L+  +  +C R Q +            +     L  A NC   +    AG 
Sbjct: 758 PCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISSKAQLFCATNCNLCDDFFLAGF 817

Query: 670 SSMSSVLYVNL 680
              + V Y+NL
Sbjct: 818 KRFAHVGYLNL 828


>gi|356503056|ref|XP_003520328.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 968

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 247/794 (31%), Positives = 403/794 (50%), Gaps = 96/794 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF++FRGEDTR +F  HL+  LS   +KTF+D++ +        L+  IE S IAI++
Sbjct: 19  YDVFINFRGEDTRRSFVCHLNCALSKAGVKTFLDEENLHKGMKLDELMTAIEGSQIAIVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVR--KQSHSFGRHFSRLRKR 98
           FS+ Y  S W                      FY +DPS VR   + H FG+      ++
Sbjct: 79  FSKSYTESTWCLRELEKVIECNETYGQSVLPVFYNIDPSVVRHRDEKHDFGKVLKSTAEK 138

Query: 99  ------FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                     + RW  AL+EA+  SG+D++  R +++L+E+I  DVL +++    S  K 
Sbjct: 139 NYSGEHLENALSRWSRALSEASKFSGWDASKFRNDAELVEKIVEDVLTKIEYDVLSITKF 198

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            VG++  ++++   +   S   C + IWG+GG  K T A A++N+I+  F    F  ++R
Sbjct: 199 PVGLKSRVQKVIGFIENQSTRACIIVIWGMGGSGKTTAAKAIYNEINCRFGHKSFIEDIR 258

Query: 213 EA---EETGGIKDLQKKLLSELSKDGN-MRNIESQL----NRLARKKVRIVFDDVTS--- 261
           E     E+ G+  LQ+KLLS++ K  + ++N+         RL+ K+V IV DDV     
Sbjct: 259 EVCSQTESKGLVSLQEKLLSDILKTNHQIQNVGMGTIMIEKRLSGKRVLIVLDDVNEIGQ 318

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        G+ +IITTRD  +L     +  Y M+++   ++ +LF   AF     
Sbjct: 319 VEGLCGNCEWFGPGTVIIITTRDVGLLNTLKVDCVYEMEQMNENESLELFSWHAFDEAKP 378

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
                EL    + Y  G+PLAL+VLG YL  R K +WES + KLE+IP+ E+++ L+IS+
Sbjct: 379 RKDFNELARSVVVYCGGLPLALRVLGSYLNNRRKNLWESVLSKLEMIPNGEVQKKLRISF 438

Query: 369 DSLDD-SQKNVFLDIACFLEGEHRDEVISIFDASK-------------SLINLDLFYRIR 414
           D L D  +K++FLD+ CF  G+ R  V  + +  K             SLI ++   ++ 
Sbjct: 439 DGLSDYMEKDIFLDVCCFFIGKDRAYVTDVLNGRKLHAKTVITDLIGRSLIRVEKNNKLG 498

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH LL++MGREI+R++    PGKR+RLW H+D+  VL KNTGTEAIEG++L  +  +R  
Sbjct: 499 MHPLLQEMGREIIREKLWKEPGKRSRLWFHEDVLDVLTKNTGTEAIEGLALKSHLTSRAC 558

Query: 475 HMNSYAFSKMPKLRFLRFYGDK---NKCMVS-HLEGVPFAEVRHLEWPQCPLKTLNICAE 530
              + AF KM  LR L+    +   N C +S  L+ + +   R    P       N+  E
Sbjct: 559 -FKTCAFEKMKNLRLLQLDHAQLAGNYCYLSKQLKWICWQGFRSKYIPN------NLYLE 611

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            +++  +  + ++ LW++    P  L   K      +   K L   PD   L +LE L +
Sbjct: 612 DVIAFDLKHSHLQLLWEE----PQVLWNLK---ILNLSHSKDLTETPDFSTLPSLEKLIL 664

Query: 589 KGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K   ++ ++ +S+G+L+ +  + L + ++L  +P+ I  L  L  L +S C ++  L   
Sbjct: 665 KDCPSLCKVHQSIGKLNNLLLINLKDCTSLSNLPKEIYKLKSLKTLILSGCSKINILEND 724

Query: 648 PC---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
                +L  L A N T+++++P       S+ Y++LC F     +    +++  WM  ++
Sbjct: 725 IVQMESLITLIAEN-TAMKQVPFSFVISKSIGYISLCGFEGFSHSVFPSVIR-YWMSPTM 782

Query: 705 YEERGIKKSMYFPG 718
                I     FPG
Sbjct: 783 ---NPISYICSFPG 793


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 275/839 (32%), Positives = 416/839 (49%), Gaps = 142/839 (16%)

Query: 5   FLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFS 63
             SFRG+DTR+NFTSHL++ L+ + I  ++DD +L RG  I  +L    E S  ++IIFS
Sbjct: 66  LFSFRGKDTRNNFTSHLYYNLAQRGIDVYMDDRELERGKTIEPALWKPFEESRFSVIIFS 125

Query: 64  ERYASSRWF-----------------------------FYRVDPSHV----RKQSHSFGR 90
             YASS W                              FY VDPS V    RK   +F  
Sbjct: 126 RDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEFYDVDPSEVIERKRKYEEAFVE 185

Query: 91  HFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN 150
           H    ++   EK++ WK+ L+  A+LSG+D    R ES+ I+ I   +  +L  T  + +
Sbjct: 186 HEQNFKENL-EKVRNWKDCLSTVANLSGWDVRN-RNESESIKIIVEYISYKLSITLPTIS 243

Query: 151 KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
           K LVG++  +E +   +         + I+G+GGI K T+A  V+++    FEGS F  N
Sbjct: 244 KNLVGIDSRLEVLNGYIGEEVGEAIFIGIYGMGGIGKTTVARVVYDRFRLQFEGSCFLAN 303

Query: 211 VRE--AEETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS-- 261
           VRE  AE+ G  + LQ++LLSE+  +      + R IE    RL  KK+ ++ DDV    
Sbjct: 304 VREVFAEKDGPCR-LQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKE 362

Query: 262 --------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                         GSR+IIT+RDKQVL      + Y  ++L   DA  LF Q AF  D 
Sbjct: 363 QLEFLAEERGWFGPGSRIIITSRDKQVLTRNGVARIYEGEKLNDDDALMLFSQKAFKNDQ 422

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
                ++L+ + + YA G+PLAL+V+G +L GRS   W  A+ ++  IP  EI +VL +S
Sbjct: 423 PAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDREIIKVLLVS 482

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           +D L + +K +FLDIACFL+G   D +  I D               +SLI++    ++ 
Sbjct: 483 FDGLHELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSR-DQVW 541

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH+LL+ MG+EI+R+ES   PG+R+RLW +KD+   L  NTG E +E I LDM  + +E 
Sbjct: 542 MHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNTGKEKVEAIFLDMPGI-KEA 600

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVP--FAEVRHLEWPQCPLKTL--NICAE 530
             N  AFSKM +LR L+         V   EG       +R LEW   P K+L   +  +
Sbjct: 601 RWNMKAFSKMSRLRLLKIDN------VQLFEGPEDLSNNLRFLEWHSYPSKSLPAGLQVD 654

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEY 585
           +LV L M  + +EQLW             K+ +  +II+      L + PD   + NL+ 
Sbjct: 655 ELVELHMANSNLEQLWYGC----------KSAVNLKIINLSNSLNLSQTPDLTGIPNLKS 704

Query: 586 LTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L ++G T++ E+  SL     ++ + L N  ++  +P ++  +  L    +  C +L+  
Sbjct: 705 LILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNL-EMESLEVCTLDGCSKLEKF 763

Query: 645 PELPCN--------------------------LGLLSARNCTSLEKLPAGLSSMSSVLYV 678
           P++  N                          LGLLS  NC +L+ +P+ +  + S+  +
Sbjct: 764 PDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKL 823

Query: 679 NL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-----SMYFPGNEIPKWFRHQSM 730
           +L  C+ LK  P  L ++        SL E  G+        +  PGNEIP WF HQ +
Sbjct: 824 DLSGCSELKYIPENLGKV-------ESLEEFDGLSNPRTRFGIAVPGNEIPGWFNHQKL 875


>gi|40644189|emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 256/754 (33%), Positives = 378/754 (50%), Gaps = 132/754 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS   L  I+ S I+I 
Sbjct: 39  YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHFLRAIQESKISIA 98

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  +R
Sbjct: 99  VFSKGYASSRWCLNELVEILKCKKRKTGQIVLPIFYDIDPSDVRKQNGSFAEAFVKHEER 158

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA +LSG++ N +    E+K I+EI   VL +L+  +    + LVG
Sbjct: 159 FEEKLVKEWRKALEEAGNLSGWNLNDMANGHEAKFIKEIIKVVLNKLEPKYLYVPEHLVG 218

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++     I   L   ++ V  + I G+ GI K TIA AVFN++   FEGS F  ++ E +
Sbjct: 219 MDQLARNIFDFLSAATDDVRIVGIHGMPGIGKTTIAQAVFNQLCYGFEGSCFLSSINERS 278

Query: 215 EETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+L  ++ K      D   R       RL RK+V +V DDV         
Sbjct: 279 KQVNGLVPLQKQLHHDILKQDVANFDCADRGKVLIKERLRRKRVLVVADDVAHLEQLNAL 338

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  +L+   A++ Y+++EL   ++ +LF + AF        +
Sbjct: 339 MGDRSWFGPGSRVIITTRDSNLLRE--ADQIYQIEELKPDESLQLFSRHAFKDSKPAQDY 396

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+ KA+ Y  G+PLAL+V+G  L  +++    S +  L  IP+ +I+  L ISY +LD
Sbjct: 397 IELSKKAVGYCGGLPLALEVIGALLYRKNRGRCVSEIDNLSRIPNQDIQGKLLISYHALD 456

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
              +  FLDIACF  G  R+ V  +  A               +SLI +     + MHDL
Sbjct: 457 GELQRAFLDIACFFIGIEREYVTKVLGARCRPNPEVVLETLSERSLIQV-FGETVSMHDL 515

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVL--KKNTGTEAIEGISLDMNKVNREIHM 476
           LRDMGRE+V K S   PGKR R+W+ +D + VL  +K  GT+ ++G++LD+ + +    +
Sbjct: 516 LRDMGREVVCKASPKQPGKRTRIWNQEDAWNVLEQQKVRGTDVVKGLALDV-RASEAKSL 574

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEK 531
           ++ +F++M  L  L+  G        HL G   +   E+  + W +CPLK L  +   + 
Sbjct: 575 SAGSFAEMKCLNLLQING-------VHLTGSLKLFSKELMWICWHECPLKYLPFDFTLDN 627

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           L  L M  + +++LW                                          KG 
Sbjct: 628 LAVLDMQYSNLKELW------------------------------------------KGK 645

Query: 592 TIRELPESLGRLSWV------KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +R + +S   L +V      ++L L   S+L  + +SI +L+ L FL +  C RL+ LP
Sbjct: 646 KVRNMLQSPKFLQYVIYIYILEKLNLKGCSSLVEVHQSIGNLTSLDFLNLEGCWRLKNLP 705

Query: 646 ELPCNLGLLSARN---CTSLEKLPAGLSSMSSVL 676
           E   N+  L   N   C+ LEKLP  +  M S++
Sbjct: 706 ESIGNVKSLETLNISGCSQLEKLPESMGDMESLI 739



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 101/285 (35%), Gaps = 102/285 (35%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLP--------------DELENLEYLTVKG---- 590
           ++ LP S+   K+  T  I  C  LE+LP              D +EN ++L+  G    
Sbjct: 701 LKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIELLADGIENEQFLSSIGQLKH 760

Query: 591 ------------------------TTIRELPESLGRLSWVKRLILSNNSNLER------- 619
                                      R LP S  +   VKRL L +    +R       
Sbjct: 761 VRRLSLRGYSSTPPSSSLISAGVLNLKRWLPTSFIQWISVKRLELPHGGLSDRAAKCVDF 820

Query: 620 ------------------IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
                             +P  I  LSKL FL +  C+ L ++P+LP +L  L A  C S
Sbjct: 821 SGLSALEVLDLIGNKFSSLPSGIGFLSKLKFLSVKACKYLVSIPDLPSSLDCLDASYCKS 880

Query: 662 LE--KLP--------------------AGLSSMSSVLYVNLCNFLKLDPNELS----EIV 695
           LE  ++P                     G+  +S+ ++    +  +  PN+L     E +
Sbjct: 881 LERVRIPIEPKKELDINLYKSHSLEEIQGIEGLSNNIWSLEVDTSRHSPNKLQKSVVEAI 940

Query: 696 KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRP 740
            +G  ++ ++   GI      PG  +P W  +   G S +    P
Sbjct: 941 CNGRHRYCIH---GI------PGGNMPNWMSYSGEGCSLSFHIPP 976


>gi|255579431|ref|XP_002530559.1| conserved hypothetical protein [Ricinus communis]
 gi|223529897|gb|EEF31827.1| conserved hypothetical protein [Ricinus communis]
          Length = 833

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 332/596 (55%), Gaps = 86/596 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF+SFRG D RD F SHLH  L    +  F+D++L RG  I+ SLL  IE S ++I+
Sbjct: 15  IYDVFISFRGADVRDGFLSHLHQSLDRNQVNAFVDEKLKRGKEITSSLLEIIEKSYVSIV 74

Query: 61  IFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFP--EKMKRWKNALTEAADLSG 118
           IFS+ YA S W                       L K F   +KMK+             
Sbjct: 75  IFSKNYADSPWCL-------------------DELVKIFECYKKMKQI------------ 103

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSK--NKGLVGVECSIEEIESLLCIGSEGVCK 176
               V+RP+S+LI EI + VL+ LD    S     GL G++   +++ SLLC+ S  V  
Sbjct: 104 ----VVRPDSRLIREIVSHVLEELDHLTPSDVCEDGLFGIDSRSKDVRSLLCLESTDVQV 159

Query: 177 LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLL-SELSKDG 235
           + IWG+GGI K TI   +F++I + F    F  +VRE  E      LQ ++L   L KD 
Sbjct: 160 IGIWGMGGIGKTTIVYKLFSQIHKQFPRQCFVADVREKFENSTKCSLQSEILYGLLGKDN 219

Query: 236 NMRNIESQLN-----RLARKKVRIVFDDVT----------------SGSRVIITTRDKQV 274
               +  +LN     RL+++KV IV DDV+                SGSR+IIT+RD+Q+
Sbjct: 220 LNTGMPMKLNSSVRRRLSQEKVLIVLDDVSDLDQIEYVVGSHVIYGSGSRIIITSRDRQL 279

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
           LKN  A K Y +K+L + +A  LF   AF  +     ++EL   AI YAQG+PLALKVLG
Sbjct: 280 LKNVGA-KVYEVKKLNHFEALHLFNLHAFKQNPPKKEYMELLRMAINYAQGIPLALKVLG 338

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV 394
             L G+S E WE  + KL++    +++++L+ISYD LD+ QK +FLDIACF +G  +D V
Sbjct: 339 SNLYGKSVEEWEDELEKLKVSSDTKVKKILRISYDGLDEKQKEIFLDIACFFKGYDKDIV 398

Query: 395 ISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRL 441
            ++ +               KSL+ +    ++ MHDLL+ MG++IV +E     G+R RL
Sbjct: 399 TNVLNGCGFFAKSGISHLIDKSLVTISRDNKLGMHDLLQTMGKDIVSEE--KELGRRTRL 456

Query: 442 WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG----DKN 497
           W+ +D+Y+VL K+ GT+++EG+ L+M+++ R IH++S AF K+  LR L+FY      KN
Sbjct: 457 WNSEDVYKVLAKDMGTKSVEGMLLNMSQI-RYIHLSSTAFEKLCNLRVLKFYEKNYFKKN 515

Query: 498 KCMVSH-LEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQ 550
           K ++   LE  P  E+R L W Q PLK L +    E LV L MP +++ Q W + Q
Sbjct: 516 KVLLPEGLEYFP-EELRFLHWDQYPLKCLPLQFRLENLVELHMPKSQIRQFWTEDQ 570


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 257/719 (35%), Positives = 387/719 (53%), Gaps = 73/719 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L    I+TF DD QL RG  IS  L+  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDRLYHELDRHGIRTFRDDPQLERGTAISPELVTAIEQSMSAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YA+S W                     FY VDPSHVR Q  SF   F    + F 
Sbjct: 79  VLSPNYATSTWCLRELSKILECMEERGRILPIFYEVDPSHVRHQRGSFAEAFQEHEEEFG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ---SKNKGLV 154
           E  K    W++ALT+ A L+G+ S   R E++LI EI + +  ++  +     S  K  V
Sbjct: 139 EGNKEVEGWRDALTKVASLAGWTSKDYRYETELIREIVHALCSKVHPSLTVCGSSGKS-V 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  +EEI+ LL   +  V  + IWG+GGI K T+A  V+ KIS  FE   F  NVRE 
Sbjct: 198 GMDTKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLAQLVYEKISHQFEVCIFLANVREV 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSGSRVIIT 268
             T G+  LQK++LS++ K  N++  N+ +  N + R    K+V +V DDV    ++   
Sbjct: 258 SATRGLVHLQKQILSQIMKKENVKVWNVYNGNNMIKRCLCNKEVLLVLDDVDQSEQL--- 314

Query: 269 TRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPL 328
             +  V +  W  K Y++K L   +A +LF   AF     +  + E +   +KYA G+PL
Sbjct: 315 --ENLVGEKDWFEKPYKLKGLNENEALQLFSWKAFRKHEPEEDYAEQSKSFVKYAGGLPL 372

Query: 329 ALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG 388
           ALK LG +L GRS + W SA+ KL   P++ + ++LKIS+D LD+ +K +FLDIACF   
Sbjct: 373 ALKTLGSFLNGRSPDEWNSALAKLHQTPNITVFKILKISFDGLDEMEKKIFLDIACFRRL 432

Query: 389 EHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDMGREIVRKESINHP 435
              + +I + D+S             KSL+ +    ++ +HDL+ +M  EIVR+E+   P
Sbjct: 433 YRNEFMIELVDSSDPCNHITRRVLAEKSLLTISSDNQVDVHDLIHEMACEIVRQEN-EEP 491

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD 495
           G R+RL    +I+ V  +NTGTEAIEGI LD+ ++  E   N  AFSKM KL+ L  +  
Sbjct: 492 GGRSRLCLRNNIFHVFTQNTGTEAIEGILLDLAEL-EEADWNLEAFSKMCKLKLLYIH-- 548

Query: 496 KNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQRLP 553
            N  +    + +P A +R L W   P K+L  C   ++LV L +P +K++ LW+  + L 
Sbjct: 549 -NLRLSVGPKFLPNA-LRFLNWSWYPSKSLPPCFQPDELVELSLPYSKIDHLWNGKKCLD 606

Query: 554 SSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLI 610
           +        +++ I     L R PD   + NLE L ++G T + ++  S+  L  +K   
Sbjct: 607 N---LKSIDLSYSI----NLTRTPDFTGIPNLEKLILEGCTNLVDIHPSIALLKRLKIWN 659

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS--ARNCTSLEKLPA 667
           L N  +++ +P  + ++  L  L ++ C +L+ +P+       LS  + + T++EKLP+
Sbjct: 660 LRNCQSIKSLPSEV-YMEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSGTAVEKLPS 717



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 87/182 (47%), Gaps = 22/182 (12%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP  +G LS + RL L  N N   +P SI  LSKL    + +C+RLQ LPEL  N  L 
Sbjct: 791 ELPNDIGSLSSLVRLELRGN-NFVSLPASIHLLSKLRRFNVENCKRLQQLPELWANDVLS 849

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE----LSEIVKDGWMKHSLYEERGI 710
              NCTSL+        +++  ++N  N L +  N+    L   V   W++  +     +
Sbjct: 850 RTDNCTSLQLF---FGRITTHFWLNCVNCLSMVGNQDVSYLLYSVLKRWIEIQVLSRCDM 906

Query: 711 KKSM-------------YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
              M               PG+EIP+WF +QS+G   T K   P  A  +K I FA CA+
Sbjct: 907 TVHMQETHRRPLEYLDFVIPGSEIPEWFNNQSVGDRVTEKLL-PWDACNSKWIGFAVCAL 965

Query: 758 VV 759
           +V
Sbjct: 966 IV 967


>gi|186527047|ref|NP_001119319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006746|gb|AED94129.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1191

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 260/755 (34%), Positives = 387/755 (51%), Gaps = 82/755 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG D R NF SHL+  L    I TF+DD +L RG+ IS  LL  IE S I I+
Sbjct: 17  YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 76

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + ++ YASS W                       F  VDPS +R Q  S+ + FS+ +  
Sbjct: 77  VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 136

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            P  K+K W+ ALT+ A++SG+D    R E++ I +I  ++LKRL   +       VG+ 
Sbjct: 137 HPLNKLKDWREALTKVANISGWDIKN-RNEAECIADITREILKRLPCQYLHVPSYAVGLR 195

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEE 216
             ++ I SLL IGS+GV  + I+G+GGI K T+A   FN+ S  FEGS F  N RE +++
Sbjct: 196 SRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKK 255

Query: 217 TGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARKK-----------------VRIVFD 257
             G   LQ +LLS++ +  D   + ++  +    R K                   I  D
Sbjct: 256 PEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRD 315

Query: 258 DVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTR+  +LK   A   Y  KEL   ++ +LF   AF         ++ ++
Sbjct: 316 CFGHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSE 375

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + Y  G+PLA++VLG +L  RS   WES ++ L+ IP+  I+  L+IS+++L   QK+
Sbjct: 376 EVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNALTIEQKD 435

Query: 378 VFLDIACFLEGEHRDEVISIFDASKSL--INLDLFYR----------IRMHDLLRDMGRE 425
           VFLDIACF  G     V  I D       I L L             I MHDLLRDMGR+
Sbjct: 436 VFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQ 495

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ S    G+R+RLW H D+  VLKK +GT AIEG+SL  + ++ + +    AF+KM 
Sbjct: 496 IVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQ-YFEVEAFAKMQ 554

Query: 486 KLRFLRF-YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPCTKV 542
           +LR L   Y D N       E  P  ++R L W    L+   +N+  E L +L +  + +
Sbjct: 555 ELRLLELRYVDLN----GSYEHFP-KDLRWLCWHGFSLECFPINLSLESLAALDLQYSNL 609

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT-VKGTTIRELPES 599
           ++ W   Q  P      K     ++     L   PD     N+E L  +   ++  + +S
Sbjct: 610 KRFW-KAQSPPQPANMVK---YLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKS 665

Query: 600 LGRLSWVKRLILSNNSN---LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           +G L   K+L+L N S+   L+ +PE I  L  L  LF+S+C +L+ L +    L  L+ 
Sbjct: 666 IGILD--KKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTT 723

Query: 657 --RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLD 687
              + T+L ++P+ ++ +  +  L +N C  L  D
Sbjct: 724 LLADFTALREIPSTINQLKKLKRLSLNGCKGLLSD 758



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 37/192 (19%)

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +PE +G LS+++ L L  NS    +P     L  L  L +S C +LQ++  LP +L  L 
Sbjct: 800 IPEDIGSLSFLRDLDLRGNS-FCNLPTDFATLPNLGELLLSDCSKLQSILSLPRSLLFLD 858

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL-------DPNELSEIVKDG---------- 698
              C  L++ P  +S  S++  + L + + L       +   LS IV DG          
Sbjct: 859 VGKCIMLKRTP-DISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLASTDTTI 917

Query: 699 ------WMKHSLYEERGIKKSMYFP---GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                 W+K +        + +Y P    N IP W   +    S ++    P     + +
Sbjct: 918 NTMLENWLKRN-------HECIYIPVDRPNVIPNWVYFEEEKRSFSITV--PETDNSDTV 968

Query: 750 ISFAFCAVVVFP 761
           + F      V P
Sbjct: 969 VGFTLWMNFVCP 980


>gi|357513207|ref|XP_003626892.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520914|gb|AET01368.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 908

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 246/778 (31%), Positives = 398/778 (51%), Gaps = 97/778 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVF++FRG+DTR+NF SHL+  L+   I TF+DD+ L +G+ +   LL  I+ S + I
Sbjct: 35  LYDVFINFRGKDTRNNFVSHLYAALTNVRINTFLDDEELGKGNELGPELLQAIQGSQMFI 94

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQS-HSFGRHFSRLRK 97
           ++FSE YA S W                      FY + PS +R+ +   FG  F+    
Sbjct: 95  VVFSENYARSSWCLDELLQIMECRANKGQVVMPVFYGISPSDIRQLALRRFGEAFNNNTD 154

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              + +     AL++A+ L+G+D +    ES  +++I + VL +LD  +       VG+E
Sbjct: 155 ELDQLIYM---ALSDASYLAGWDMSNYSNESNTVKQIVSQVLTKLDKKYLPLPDFPVGLE 211

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EE 216
              E+    L   S+GVC + IWG+GGI K TIA  ++N +   FE   F  N+RE  E+
Sbjct: 212 SRAEQSIRYLRHNSDGVCLVGIWGMGGIGKSTIAKVIYNNLCYEFEDQSFLANIREVWEK 271

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLN------RLARKKVRIVFDDVTS--------G 262
             G  DLQ++LLS++ K   ++    +        RL  K+  +V DDV+         G
Sbjct: 272 DRGRIDLQEQLLSDILKTRKIKVHSVEFGKAMIKERLVTKRALVVLDDVSEFDQFNSLCG 331

Query: 263 SR--------VIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
           +R        +IITTRD ++L     +  Y  + L   ++ +LF Q AF         + 
Sbjct: 332 NRNGIGPGSIIIITTRDVRLLDILGVDFIYEAEGLNSVESLELFSQHAFRETSPIEGFLI 391

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DD 373
           L+   + Y  G+PLAL+VLG YL  R K+ W+S + KLE IP+ +I E LKIS+D L D 
Sbjct: 392 LSRYVVAYCGGLPLALEVLGSYLFKRRKQEWQSVLSKLEKIPNDQIHEKLKISFDGLRDH 451

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            +K++FLD+ CF  G+ R  V +I +               +SLI ++ + ++ MHDLLR
Sbjct: 452 MEKDIFLDVCCFFIGKDRAYVTNILNGCGLHADIGITVLIERSLIKIEKYNKLGMHDLLR 511

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMGREIVR+ S   P KR+RLW+H+D+  VL  +TGT+AIEG+ + + + +R +  ++  
Sbjct: 512 DMGREIVRESSPEEPEKRSRLWYHEDVVDVLTDHTGTKAIEGLVMKLQRSSR-VGFDAIG 570

Query: 481 FSKMPKLRFLRF-----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           F KM +LR L+       GD  +C   HL          L W   PLK +  N   + LV
Sbjct: 571 FEKMKRLRLLQLDHVQVIGDY-ECFSKHLS--------WLSWQGFPLKYMPENFYQKNLV 621

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
           ++ +  + + Q+W    + P  L   K      +     L   PD  +L NLE L +K  
Sbjct: 622 AMDLKHSNLTQVW----KRPQMLEGLK---ILNLSHSMYLTSTPDFSKLPNLENLIMKDC 674

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE---- 646
            ++ E+  S+G L  +  +   + ++L  +P  I  L+ +    +S C +++ L E    
Sbjct: 675 QSLFEVHSSIGDLKKLLLINFKDCTSLRNLPREIYQLTSVKTFILSGCSKIEKLEEDIVQ 734

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
           +     L++A+  T ++++P  +    ++ Y++LC +  L  +    I+   WM  ++
Sbjct: 735 MKSLTTLIAAK--TGVKQVPFSIVKSKNIGYISLCEYEGLSRDVFPSIIW-SWMSPNM 789


>gi|30692996|ref|NP_198509.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006745|gb|AED94128.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  332 bits (850), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 260/755 (34%), Positives = 387/755 (51%), Gaps = 82/755 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG D R NF SHL+  L    I TF+DD +L RG+ IS  LL  IE S I I+
Sbjct: 14  YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 73

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + ++ YASS W                       F  VDPS +R Q  S+ + FS+ +  
Sbjct: 74  VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 133

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            P  K+K W+ ALT+ A++SG+D    R E++ I +I  ++LKRL   +       VG+ 
Sbjct: 134 HPLNKLKDWREALTKVANISGWDIKN-RNEAECIADITREILKRLPCQYLHVPSYAVGLR 192

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEE 216
             ++ I SLL IGS+GV  + I+G+GGI K T+A   FN+ S  FEGS F  N RE +++
Sbjct: 193 SRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKK 252

Query: 217 TGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARKK-----------------VRIVFD 257
             G   LQ +LLS++ +  D   + ++  +    R K                   I  D
Sbjct: 253 PEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRD 312

Query: 258 DVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTR+  +LK   A   Y  KEL   ++ +LF   AF         ++ ++
Sbjct: 313 CFGHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSE 372

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + Y  G+PLA++VLG +L  RS   WES ++ L+ IP+  I+  L+IS+++L   QK+
Sbjct: 373 EVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNALTIEQKD 432

Query: 378 VFLDIACFLEGEHRDEVISIFDASKSL--INLDLFYR----------IRMHDLLRDMGRE 425
           VFLDIACF  G     V  I D       I L L             I MHDLLRDMGR+
Sbjct: 433 VFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQ 492

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ S    G+R+RLW H D+  VLKK +GT AIEG+SL  + ++ + +    AF+KM 
Sbjct: 493 IVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQ-YFEVEAFAKMQ 551

Query: 486 KLRFLRF-YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPCTKV 542
           +LR L   Y D N       E  P  ++R L W    L+   +N+  E L +L +  + +
Sbjct: 552 ELRLLELRYVDLN----GSYEHFP-KDLRWLCWHGFSLECFPINLSLESLAALDLQYSNL 606

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT-VKGTTIRELPES 599
           ++ W   Q  P      K     ++     L   PD     N+E L  +   ++  + +S
Sbjct: 607 KRFW-KAQSPPQPANMVK---YLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKS 662

Query: 600 LGRLSWVKRLILSNNSN---LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           +G L   K+L+L N S+   L+ +PE I  L  L  LF+S+C +L+ L +    L  L+ 
Sbjct: 663 IGILD--KKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTT 720

Query: 657 --RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLD 687
              + T+L ++P+ ++ +  +  L +N C  L  D
Sbjct: 721 LLADFTALREIPSTINQLKKLKRLSLNGCKGLLSD 755



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 37/192 (19%)

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +PE +G LS+++ L L  NS    +P     L  L  L +S C +LQ++  LP +L  L 
Sbjct: 797 IPEDIGSLSFLRDLDLRGNS-FCNLPTDFATLPNLGELLLSDCSKLQSILSLPRSLLFLD 855

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL-------DPNELSEIVKDG---------- 698
              C  L++ P  +S  S++  + L + + L       +   LS IV DG          
Sbjct: 856 VGKCIMLKRTP-DISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLASTDTTI 914

Query: 699 ------WMKHSLYEERGIKKSMYFP---GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                 W+K +        + +Y P    N IP W   +    S ++    P     + +
Sbjct: 915 NTMLENWLKRN-------HECIYIPVDRPNVIPNWVYFEEEKRSFSITV--PETDNSDTV 965

Query: 750 ISFAFCAVVVFP 761
           + F      V P
Sbjct: 966 VGFTLWMNFVCP 977


>gi|359493388|ref|XP_003634583.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1196

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 260/744 (34%), Positives = 382/744 (51%), Gaps = 116/744 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDV LSFRGEDTR+NFTSHL+  L   +I+TFIDD+ L RG+ I+  LL  IE S IA+I
Sbjct: 20  YDVVLSFRGEDTRNNFTSHLYKALDHANIETFIDDEGLPRGEEIAPELLKAIEGSRIALI 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR- 98
           +FS+ YA S+W                      FY V+PS VR Q+  +G  F+   +  
Sbjct: 80  VFSKTYAHSKWCLDELVKIMECEKEKGQQVFPIFYHVEPSEVRNQTGIYGEAFNNHERNA 139

Query: 99  ----FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 +K+++W+ AL +A +LSGF     R ES+ I+EI  ++ +RL        + +V
Sbjct: 140 DEEKKKKKIEQWRTALRKAGNLSGFPLQD-RFESEFIQEIIGEI-RRLTPKLVHVGENIV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G++ +++E+E L+   S GV  + I+GIGGI K TIA  V+N +   F+   F  NVRE 
Sbjct: 198 GMDENLKEVELLINAQSNGVSMVGIYGIGGIGKTTIAKVVYNDMLDQFQRHSFLENVREK 257

Query: 214 AEETGGIKDLQKKLLSE--LSKDGNMRNIESQLNRLARK----KVRIVFDDVT------- 260
           +++  G+ +LQKKLL +  + K+  +RNI   +  + RK    KV IV DDV        
Sbjct: 258 SKDDHGLLELQKKLLCDILMEKNLKLRNINDGIKMVKRKCRIEKVLIVLDDVDCQKQLKF 317

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS +I+TTR+K+ L    +   Y  K L +  A +LFC  AF  DH    
Sbjct: 318 LAPNSECFHQGSIIIVTTRNKRCLDVHKSYSSYEAKGLAHTQAKELFCWNAFQQDH--PE 375

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +L++  + YA+G+PLAL VLG +L  R  + WES + KL+  P  +I++VL+ISYD L
Sbjct: 376 YEDLSNCILDYAKGLPLALVVLGSFLYQRDVDYWESTLHKLKTNPLEDIQKVLQISYDGL 435

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDASK--SLINLDLFYR----------IRMHDLL 419
           D+  K +FLDIACF   E +  V  I +  K      L + +           IRMHDLL
Sbjct: 436 DNKWKELFLDIACFFRNEDKKVVTRILEGCKFHPKSGLTVLHERCLISITDDTIRMHDLL 495

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN-KVNREIHMNS 478
           ++MG  IVR+    HP + +RLW  +DI  VL +N GT+ IEGIS++ +    + I + +
Sbjct: 496 QEMGWAIVRQNFPEHPEEWSRLWELQDIKSVLPQNKGTKNIEGISINRSWDSKKRIQLTA 555

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF KM +LR L+                      +  W   PL+ L  N   E  V L 
Sbjct: 556 EAFRKMNRLRLLKVK-------------------VYFHWDNYPLEYLPSNFHVENPVELN 596

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLTVKGT 591
           +  + +E LW+    +P+           ++ D      L D      ++NLE L +KG 
Sbjct: 597 LWYSNIEHLWEG--NMPAK--------KLKVTDLSYSRHLVDISNISSMQNLETLILKGC 646

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           T       L  L+ ++ L LSN  NL  +P+SI  L+ L  L +  C +L     +  N+
Sbjct: 647 T-----RLLKHLNGLEELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSKLVGFTNI--NI 699

Query: 652 GLLSARN------CTSLEKLPAGL 669
           G L A        C +LE LP  +
Sbjct: 700 GSLKALEYLDLSWCENLESLPNSI 723



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 152/374 (40%), Gaps = 82/374 (21%)

Query: 518  PQCPLKTL--------------------NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLC 557
            PQCPL +L                    ++ + +++SL    +  E + D +  L SSL 
Sbjct: 833  PQCPLSSLVELSVRKFYGMEEDILSGSFHLSSLQILSLGNFPSVAEGILDKIFHL-SSL- 890

Query: 558  TFKTPITFEIIDCKMLER-LPDELENL---EYLTVKGTTIRE--LPESLGRLSWVKRLIL 611
                 +   +  CK  E  +P ++ NL   + L+++   + E  +   +  L+ ++ L L
Sbjct: 891  -----VKLSLTKCKPTEEGIPGDIWNLSPLQQLSLRDCNLMEGKILNHICHLTSLEELYL 945

Query: 612  SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
              N +   IP  I  LS L  L +SHC+ LQ +PELP +L  L A +C+       G+SS
Sbjct: 946  GWN-HFSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLDA-HCSD------GISS 997

Query: 672  MSSVLYV-NLCNFLKLDPNELSEIVKDGWMKH-SLYEERGIKKSMYFP-GNEIPKWFRHQ 728
              S+L + ++ N  K      SEI     + H S +   GI   +  P  + I +W  ++
Sbjct: 998  SPSLLPIHSMVNCFK------SEIEDRKVINHYSYFWGNGI--GIVIPRSSGILEWITYR 1049

Query: 729  SMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWK 788
            +MG +      PP     + L  FA C V V PA+   +       D          D +
Sbjct: 1050 NMGRNEVTVELPPNWYKNDDLWGFALCCVYVAPAYESQYELGHISKD----------DAE 1099

Query: 789  RKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYD-EFSFRIHCSFHFPPYLERG 847
             + EG  + +    I Y                   P    E S+  +   HF       
Sbjct: 1100 LEDEGPGFCYMQWVICY-------------------PKLAIEESYHTNQWTHFKASFGGA 1140

Query: 848  EVKKCGIHFVYAQD 861
            +V++CGI  VY +D
Sbjct: 1141 QVEECGIRLVYTED 1154


>gi|356577841|ref|XP_003557030.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like,
           partial [Glycine max]
          Length = 1034

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 254/789 (32%), Positives = 391/789 (49%), Gaps = 120/789 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG D R    SHL   LS   + TF D++  RG+ I  SLL  I  S I II+
Sbjct: 11  YDVFLSFRGTDIRSGVLSHLIAALSNAGVNTFEDEKFERGERIMPSLLRAIAGSKIHIIL 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FS  YASS+W                      FY VDPS VR Q   FG+    L +R+ 
Sbjct: 71  FSNNYASSKWCLDELVKIMECHRTYGNEVLPVFYNVDPSDVRNQRGDFGQGLEALAQRYL 130

Query: 100 ----PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                + +K WK+AL EAA+L+G+ S   R ++ L+E+I  D++++LD          VG
Sbjct: 131 LQGENDVLKSWKSALNEAANLAGWVSRNYRTDADLVEDIVEDIIEKLDMHLLPITDFPVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  + ++   +   S   C + IWG+GG+ K TIA +++N+  R      F        
Sbjct: 191 LESRVPKLIKFVDDQSGRGCVIGIWGMGGLGKTTIAKSIYNEFRRQRFRRSFI-----ET 245

Query: 216 ETGGIKDLQKKLLSELSKDG-NMRNIESQLNRLARK----KVRIVFDDVTS--------- 261
              G  DLQ+KLLS++ K    + ++   ++ + +K    +  I+ DDVT          
Sbjct: 246 NNKGHTDLQEKLLSDVLKTKVKIHSVAMGISMIEKKLFAERALIILDDVTEFEQLKALCG 305

Query: 262 -------GSRVIITTRDKQVL---KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                   S +IITTRD ++L   K+  A   +++ E+   ++ +LF + AF       +
Sbjct: 306 NCKWIDRESVLIITTRDLRLLEELKDHHAVHIWKIMEMDENESLELFSKHAFREASPTEN 365

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             +L+   + Y  G+PLAL++LG YL  R+KE WES + KL+ IP+ +++E L+IS+D L
Sbjct: 366 WNKLSIDVVAYCAGLPLALEILGSYLRWRTKEEWESVLSKLKKIPNYKVQEKLRISFDGL 425

Query: 372 DDS-QKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLF----YRIRMHDL 418
            D  +K++FLD+ CF  G+ R  V  I D          K LI   L      ++ MH L
Sbjct: 426 RDPMEKDIFLDVCCFFIGKDRTYVTEILDGCGLHASIGIKVLIEHSLIKVEKNKLGMHPL 485

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           LRDMGREIV + S N PGKRNRLW  KD+  VL  NTGTE I+G+++ ++  +R+    +
Sbjct: 486 LRDMGREIVCESSKNEPGKRNRLWFQKDVLDVLTNNTGTETIQGLAVKLHFTSRD-SFEA 544

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
           Y+F KM  LR L+     +   +S   G    +++ + W   PLK +  N   E ++++ 
Sbjct: 545 YSFEKMKGLRLLQL----DHVQLSGNYGYLSKQLKWICWRGFPLKYIPNNFHLEGVIAID 600

Query: 537 MPCTKVEQLWDDVQRLP-------------------SSLCTFKTPITFEIID-CKMLERL 576
              +K+  LW   Q LP                   S L + +  I       CK+ + +
Sbjct: 601 FKYSKLRLLWKTPQVLPWLKFLNLSHSKNLTETPDFSKLTSLEKLILRNCPSLCKVHQSI 660

Query: 577 PDELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
            D L NL  + +KG T++R LP  + +L  VK LILS  S ++++ E I  +  LT L  
Sbjct: 661 GD-LHNLILINLKGCTSLRNLPREVYKLKSVKILILSGCSKIDKLEEDIVQMESLTTLIA 719

Query: 636 SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
            +                      T+++++P  + S  S+ Y++LC F  L  N    I+
Sbjct: 720 DN----------------------TAVKQVPFSIVSSKSIGYISLCGFEGLSRNVFPSII 757

Query: 696 KDGWMKHSL 704
              WM  ++
Sbjct: 758 W-SWMSPTM 765


>gi|37574597|gb|AAQ93075.1| TIR-NBS-LRR type R protein 7 [Malus baccata]
          Length = 1095

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 237/725 (32%), Positives = 370/725 (51%), Gaps = 122/725 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YD+FLSFRGEDTR+ FT HLH  L  +  + ++D D L RG+ I + L   IE S I+II
Sbjct: 23  YDLFLSFRGEDTRNGFTGHLHAALKDRGYQAYMDQDDLNRGEEIKEELFRAIEGSRISII 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF------- 92
           +FS+RYA S W                      FY VDPSHVRKQ       F       
Sbjct: 83  VFSKRYADSSWCLDELVKIMECRSKLGRHVLPIFYHVDPSHVRKQDGDLAEAFLKHEEGI 142

Query: 93  -----SRLRKRFPEKMKRWKNALTEAADLSGFDSNVI---RPESKLIEEIANDVLKR-LD 143
                 + R+   E++K+WK ALTEAA+LSG D  +    R  +    EI ++++ + L 
Sbjct: 143 GEGTDGKKREAKQERVKQWKKALTEAANLSGHDLRITDNGREANLCPREIVDNIITKWLM 202

Query: 144 ATFQSK-NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF 202
           +T + +  K  VG+   I++I S L  G   V  + IWG+GG+ K T A A++N+I   F
Sbjct: 203 STNKLRVAKHQVGINSRIQDIISRLSSGGSNVIMVGIWGMGGLGKTTAAKAIYNQIHHEF 262

Query: 203 EGSYFALNVREAEETGGIKDLQKKLLSELSK--------DGNMRNIESQLNRLARKKVRI 254
           +   F  +V  A    G+  LQK+L+ ++ K        D  +  IE Q      ++V +
Sbjct: 263 QFKSFLPDVGNAASKHGLVYLQKELIYDILKTKSKISSVDEGIGLIEDQFRH---RRVLV 319

Query: 255 VFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLF 298
           + D++                  GSR+IITTRD+ +LK    +K Y  ++L   +A +LF
Sbjct: 320 IMDNIDEVGQLDAIVGNPDWFGPGSRIIITTRDEHLLKQV--DKTYVAQKLDEREALELF 377

Query: 299 CQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV 358
              AFG +  +  ++EL++K + Y  G+PLAL+VLG +L  R    W+S + KL+  P  
Sbjct: 378 SWHAFGNNWPNEEYLELSEKVVSYCGGLPLALEVLGSFLFKRPIAEWKSQLEKLKRTPEG 437

Query: 359 EIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLI 405
           +I + L+IS++ LDD+QK +FLDI+CF  GE +D V  + D               + L+
Sbjct: 438 KIIKSLRISFEGLDDAQKAIFLDISCFFIGEDKDYVAKVLDGCGFYATIGISVLRERCLV 497

Query: 406 NLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL 465
            ++   ++ MHDLLR+M + I+ ++S   PGK +RLW  +++  VL   +GTE +EG++L
Sbjct: 498 TVE-HNKLNMHDLLREMAKVIISEKSPGDPGKWSRLWDKREVINVLTNKSGTEEVEGLAL 556

Query: 466 DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
                  +   ++ AF+ + KLR L+    +      HL      E+  L W +CPLK++
Sbjct: 557 PWG-YRHDTAFSTEAFANLKKLRLLQLCRVELNGEYKHLP----KELIWLHWFECPLKSI 611

Query: 526 N---ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
                  +KLV L+M  +K+ Q+W+  +    SL   K   T ++ + + L++ PD  ++
Sbjct: 612 PDDFFNQDKLVVLEMQWSKLVQVWEGSK----SLHNLK---TLDLSESRSLQKSPDFSQV 664

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
            NLE                        LIL N   L  I  SI HL +L+ + +  C++
Sbjct: 665 PNLE-----------------------ELILYNCKELSEIHPSIGHLKRLSLVNLEWCDK 701

Query: 641 LQTLP 645
           L +LP
Sbjct: 702 LISLP 706



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 26/239 (10%)

Query: 522 LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK--TPITFEIIDCKMLERLPDE 579
           L+ L+    +++SL+     +E  + D++ +P S+   K  T ++   ++   L      
Sbjct: 726 LRELHEDIGEMISLRT----LEAEYTDIREVPPSIVRLKNLTRLSLSSVESIHLPHSLHG 781

Query: 580 LENLEYLTVKGTTIR--ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
           L +L  L +    +   E+P+ LG L  ++ L L  N +   +P S+  LSKL  L + H
Sbjct: 782 LNSLRELNLSSFELADDEIPKDLGSLISLQDLNLQRN-DFHTLP-SLSGLSKLETLRLHH 839

Query: 638 CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK- 696
           CE+L+T+ +LP NL  L A  C +LE +P   S MS++  + + +     PN LS  ++ 
Sbjct: 840 CEQLRTITDLPTNLKFLLANGCPALETMP-NFSEMSNIRELKVSD----SPNNLSTHLRK 894

Query: 697 ---DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
               GW              ++   N +P WF   + G+  T    P     +  L  F
Sbjct: 895 NILQGWTSCGF-------GGIFLHANYVPDWFEFVNEGTKVTFDIPPSDGRNFEGLTLF 946


>gi|357486939|ref|XP_003613757.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515092|gb|AES96715.1| Disease resistance-like protein [Medicago truncatula]
          Length = 807

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 251/752 (33%), Positives = 388/752 (51%), Gaps = 111/752 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+  L  K I TFIDDQ +R G+ I+ +L+  I+ S IAI+
Sbjct: 49  YDVFLSFRGEDTRKGFTGNLYKALCGKGIDTFIDDQELRKGEEITPALMMAIQESRIAIV 108

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS---RLR 96
           IFSE YASS +                      FY VDP  VR Q  S+ +  +     +
Sbjct: 109 IFSENYASSTFCLKELTKIMECIKHKGRMVLPVFYHVDPCIVRHQKGSYAKALADHESNK 168

Query: 97  KRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           K    K+K+W+  L EAA +SG  F+      E + IE+I   V ++++       K  V
Sbjct: 169 KIDKAKVKQWRLVLQEAASISGWHFEHGY---EYEFIEKIIQKVSEKINRRPLHVAKYPV 225

Query: 155 GVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G+E  +E++ SLL + S EGV  + I+G+GG+ K T+A AV+N I+  F+   F  NVRE
Sbjct: 226 GLESRVEKVNSLLEVESNEGVHMVGIYGMGGLGKTTLACAVYNCIADQFDSLCFLANVRE 285

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------ 261
                G+  LQ+ LL EL ++ + +       +    +RL  KK+ ++ DDV S      
Sbjct: 286 NSMKHGLVHLQEMLLHELGEEKDHKLCSLNKGVSIIKSRLHGKKILLILDDVNSLEQLKA 345

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L      + Y ++ L   +A +LF   AF    +D  
Sbjct: 346 LAGELDWFGSGSRVIITTRDKHLLHVYRVERVYEVEGLNRKEALQLFGCNAFKTQKIDQR 405

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +++ + + Y++G+PLA++++G  L G++   WESA+     IPH  I+E+L++SYD L
Sbjct: 406 YEDISKRVVLYSKGLPLAVEIIGSDLYGKTILEWESALDTYARIPHENIQEILRVSYDGL 465

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIF---------DASKSLINLDLF----YRIRMHDL 418
            + +K +FLD+ACF +G    +V +I           A + LI+  L     Y ++MHD+
Sbjct: 466 KEFEKEIFLDLACFFKGAKLSDVKNILCCGRGFSPDYAIQVLIDKSLIKFEDYSVKMHDM 525

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + DMGREIVR E+ + PG+R+RLW  KDI  V K+N G++  E I L + K ++++  + 
Sbjct: 526 IEDMGREIVRLEAPSKPGERSRLWFSKDILHVFKENKGSDKTEIIMLRLLK-DKKVQCDR 584

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            A   M  L+ L     +  C       +P   +R L+W   P  +L  +   +KLV L 
Sbjct: 585 NALKNMENLKILVI---EEACFSKGPNHLP-KSLRVLKWCDYPESSLPADFDPKKLVILD 640

Query: 537 MPC---TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTI 593
           +     T   Q+          +  FK+    ++  CK L+++PD              I
Sbjct: 641 LSMGHFTFRNQM----------IMKFKSLREMKLSGCKFLKQVPD--------------I 676

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPCN 650
              P        +K+L L +  NL ++ +S+  L KL  L ++ C  L+ LP    LP +
Sbjct: 677 SGAPN-------LKKLHLDSCKNLVKVHDSVGLLKKLEDLNLNRCTSLRVLPHGINLP-S 728

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L  +S RNC SL++ P  L  M ++ Y+ L +
Sbjct: 729 LKTMSLRNCASLKRFPEILEKMENITYLGLSD 760



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 14/154 (9%)

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICA--EKLVSLKMP-C 539
           K   LR ++  G K    V  + G P  +  HL+  +  +K  +     +KL  L +  C
Sbjct: 655 KFKSLREMKLSGCKFLKQVPDISGAPNLKKLHLDSCKNLVKVHDSVGLLKKLEDLNLNRC 714

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIREL 596
           T +  L   +  LPS         T  + +C  L+R P+   ++EN+ YL +  T I EL
Sbjct: 715 TSLRVLPHGIN-LPSLK-------TMSLRNCASLKRFPEILEKMENITYLGLSDTGISEL 766

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
           P S+  L  +  L +     L  +P SI  L KL
Sbjct: 767 PFSIELLEGLTNLTIDRCQELVELPSSIFMLPKL 800


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 272/783 (34%), Positives = 397/783 (50%), Gaps = 104/783 (13%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VFLSFRG+DTR  FT +L   L  + IK + DD  L RG  IS  L+  IE S  A+II 
Sbjct: 17  VFLSFRGDDTRKGFTHNLFASLERRGIKAYRDDHDLERGKVISVELIEAIEESMFALIIL 76

Query: 63  SERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHF---SRLRKRFPEK 102
           S  YASS W                  F  VDPS VR Q  SF + F       +   +K
Sbjct: 77  SSNYASSTWCLDELQKILECKKEVFPIFLGVDPSDVRHQRGSFAKAFRDHEEKFREEKKK 136

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           ++ W++AL E A  SG+DS   + E+ LIE I   + K++          LVG++  ++E
Sbjct: 137 VETWRHALREVASYSGWDSKD-KHEAALIETIVGHIQKKVIPGLPCCTDNLVGIDSRMKE 195

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKD 222
           + SL+ I  + V  + IWG GGI K TIA  V+  I   F+ S F  N+RE  +T G+  
Sbjct: 196 MYSLMGIRLKDVRLIGIWGRGGIGKTTIARKVYEAIKGDFDVSCFLENIREVSKTNGLVH 255

Query: 223 LQKKL--LSELSKDGNMRNIESQ---------LNRLARKKVRIVFDDVT----------- 260
           +QK+L  L  + +D  +R ++            N L+ KKV +V DDV+           
Sbjct: 256 IQKELSNLGVIFRD-QLRIVDFDNLHDGKMIIANSLSNKKVLLVLDDVSELSQLENLAGK 314

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSRVIITTRDK +LK    +   + + L   +A +L C  AF  D     ++ L
Sbjct: 315 QEWFGPGSRVIITTRDKHLLKTHGVHLTCKARALAQNEALQLICLKAFKRDQPKKGYLNL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             + I+ A+G+PLAL+VLG +L GR+ EVW SA+ ++   PH +I++ LKISYDSL    
Sbjct: 375 CKEMIECARGLPLALEVLGSHLHGRNVEVWHSALEQIRSFPHSKIQDKLKISYDSLQPPY 434

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD-LFYRIRMHDLLRD 421
           + +FLDIACF +G   DEV +I                 + L+ LD +  ++ MHDLL++
Sbjct: 435 QKMFLDIACFFKGMDIDEVKNILRNCGDYPEIGIDILIERCLVTLDRVKNKLGMHDLLQE 494

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM-NKVNREIHMNSYA 480
           MGR IV +ES N PGKR+RLW  KDI  VL KN GT+ I+G+ L++    + E+  N+ A
Sbjct: 495 MGRNIVFEESPNDPGKRSRLWSEKDIDYVLTKNKGTDKIQGMVLNLVQPYDSEVLWNTGA 554

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI-----CAEKLVSL 535
           FSKM +LR L+    +   +   L  +P A ++ L W  CPLK L +       EKL  +
Sbjct: 555 FSKMGQLRLLKLCDMQ---LPLGLNCLPSA-LQVLHWRGCPLKALPLWHGTKLLEKLKCI 610

Query: 536 KMPCTKVEQLWDDVQRLPS-----------------SLCTFKTPITFEIIDCKMLERLPD 578
            +  +K  +   D    P+                 SL   K      + DCK L+ LP 
Sbjct: 611 DLSFSKNLKQSPDFDAAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPS 670

Query: 579 --ELENLEYLTVKGTT----IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
             E+ +L+YL + G +    + E  ES+ +LS    L++   + + ++P S+  L  L  
Sbjct: 671 NMEMSSLKYLNLSGCSEFKYLPEFGESMEQLS----LLILKETPITKLPSSLGCLVGLAH 726

Query: 633 LFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
           L + +C+ L  LP+      +L  L  R C+ L  LP GL  M  +  + L     L P+
Sbjct: 727 LNLKNCKNLVCLPDTFHKLKSLKFLDVRGCSKLCSLPDGLEEMKCLEQICLSADDSLPPS 786

Query: 690 ELS 692
           +L+
Sbjct: 787 KLN 789



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 66/268 (24%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT-IRELPESLGRLS 604
           + +LPSSL          + +CK L  LPD   +L++L++L V+G + +  LP+ L  + 
Sbjct: 711 ITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGCSKLCSLPDGLEEMK 770

Query: 605 WVKRLILSNNSNL----------------------ERIPESIRHLS-------------- 628
            ++++ LS + +L                      E IP+   HLS              
Sbjct: 771 CLEQICLSADDSLPPSKLNLPSLKRINLSYCNLSKESIPDEFCHLSHLQKTDPTRNNFVT 830

Query: 629 ---------KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL---PAGLSSM-SSV 675
                    KL  L ++ C++LQ LPELP ++  L A NCTSLE     P+   S+ +S 
Sbjct: 831 LPSCISKLTKLELLILNLCKKLQRLPELPSSMQQLDASNCTSLETSKFNPSKPRSLFASP 890

Query: 676 LYVNLCNFLKLD-PNELSEIVKDGWMKHSLYEERGIKKS---MYFPGNEIPKWFRHQSMG 731
             ++    LK   P EL  + ++        +E  + K+   M+  G+EIP WF  +   
Sbjct: 891 AKLHFPRELKGHLPRELIGLFEN-------MQELCLPKTRFGMFITGSEIPSWFVPRKSV 943

Query: 732 SSATLKTRPPRPAGYNKLISFAFCAVVV 759
           S A +    P     N+ + FA C ++V
Sbjct: 944 SFAKIAV--PHNCPVNEWVGFALCFLLV 969


>gi|297805930|ref|XP_002870849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316685|gb|EFH47108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1225

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 245/755 (32%), Positives = 389/755 (51%), Gaps = 96/755 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F +H+      K I  FID+ + R  +I   L+  I  S IAI++
Sbjct: 240 HDVFPSFHGADVRKTFLAHILKEFKGKGIVPFIDNDIERSKSIGPELVEAIRGSKIAIVL 299

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS W                      FY VDP+ V+KQ+  FG+ F +  K + 
Sbjct: 300 LSRNYASSSWCLNELVEIMKCREELGQTVMTIFYDVDPTDVKKQTGDFGKVFKKTCKGKT 359

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E +KRW+N L   A ++G  S     E+ + E+IA DV   L+    S++  G +G+  
Sbjct: 360 KEDIKRWQNVLEAVATIAGEHSCNWDNEAAMTEKIATDVSNMLNRYSPSRDFDGFIGMGA 419

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            + E+ESLLC+ S+ V  + IWG  GI K TIA  ++++ S +FE S F  N++E     
Sbjct: 420 HMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYTR 479

Query: 214 ---AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
              ++E      LQ++ LS++   KD  + ++    +RL  K+V IV D +         
Sbjct: 480 PVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAI 539

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITT+D+++LK    N  Y+++     +A+++FC +AFG +      
Sbjct: 540 AKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGF 599

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL  +  K    +PL L+V+G +  G S+  W +A+ +L+I     I+ +LK SYD+L 
Sbjct: 600 EELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILKFSYDALC 659

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD----------------ASKSLINLDL----FYR 412
           D  K++FL IAC    E   E++ + D                A KSLI L +    + R
Sbjct: 660 DEDKDLFLHIACLFNDE---EMVRVEDYLASSFLDVRQGLHLLAEKSLIALKILSADYTR 716

Query: 413 IRMHDLLRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
           I+MH+LL  +GR+IVR     + I  PGKR  L   +DI +VL  NT +  + GI L++ 
Sbjct: 717 IKMHNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDIREVLTDNTDSRNVIGILLEVR 776

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFY----GDKNKCMVSH-LEGVPFAEVRHLEWPQCPLK 523
            ++ E+++N  AF  +  L+FLRF     G+ NK  +   L  +P  ++R LEW    +K
Sbjct: 777 NLSGELNINERAFEGLSNLKFLRFRGLYDGENNKLYLPQGLNNLP-QKLRILEWSCFQMK 835

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--E 579
            L  N C + LV + M  +K++ LW   Q L +    +       + + K L+ LP+   
Sbjct: 836 CLPSNFCTKYLVHIDMWNSKLQNLWQGNQPLGNLKRMY-------LAESKHLKELPNLST 888

Query: 580 LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
             NLE LT+ G +++ ELP SLG L  ++ L L    NLE +P +I +L  L +L ++ C
Sbjct: 889 ATNLEKLTLFGCSSLAELPSSLGNLQKLQALSLRGCLNLEALPTNI-NLESLDYLDLTDC 947

Query: 639 ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
             +++ PE+  N+  L     T+++++P+ + S S
Sbjct: 948 LLIKSFPEISTNIKRLYLMK-TAVKEVPSTIKSWS 981


>gi|357468515|ref|XP_003604542.1| Resistance protein [Medicago truncatula]
 gi|355505597|gb|AES86739.1| Resistance protein [Medicago truncatula]
          Length = 1088

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 278/862 (32%), Positives = 423/862 (49%), Gaps = 154/862 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGED R  F  HL      K I  F+D++L RGD+IS +L+  IE S I+++I
Sbjct: 91  YDVFVSFRGEDIRHGFLGHLIKAFPRKQINAFVDEKLKRGDDISHALVEAIEGSFISLVI 150

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDP++VR Q  S+   FS L KR+ 
Sbjct: 151 FSENYASSHWCLEELVKIIECKEKYGRIVLPVFYGVDPTNVRHQKKSYKSAFSELEKRYH 210

Query: 101 -EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K++ W++AL ++A+LSG  S   R +++L+EEI N VLKRL +      KGL+G+   
Sbjct: 211 LSKVQNWRHALNKSANLSGIKSLDFRNDAELLEEIINLVLKRL-SKHPINTKGLIGIGKP 269

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +  +ESLL    E V  + IWG+GGI K TIA  VFN+    +EG  F   V E     G
Sbjct: 270 VAHLESLLRQQLEKVRVIGIWGMGGIGKTTIAEEVFNRSCSEYEGFCFLEKVSEESGRHG 329

Query: 220 IKDLQKKLLSELSKDGNMRNIESQLNR-----LARKKVRIVFDDVTSGSRV--IITTRD- 271
           I  L++KL S L  +    N  + L+      + R KV IV DDV    ++  +  T D 
Sbjct: 330 ITFLKEKLFSTLLAEDVKINSPNGLSNYIQRMIGRMKVLIVLDDVKEEGQIEMLFGTLDW 389

Query: 272 -----KQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGV 326
                + +L +      Y +  L  ++A +LF   AF   HL+  + EL+ + + YA+G+
Sbjct: 390 FRSDSRIILIDI-----YEVGVLKPSEALELFHLNAFKQSHLEMEYYELSKRVVAYAKGI 444

Query: 327 PLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFL 386
           PL +KVL   L G+ KEVWES + KL+ +P  ++ +V+++SYD LD  ++  FLDI    
Sbjct: 445 PLGVKVLAHLLRGKVKEVWESQLDKLKKLPSKKVYDVMRLSYDDLDRLEQKYFLDIT--- 501

Query: 387 EGEHRDEVISIFD--ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHH 444
             E  + V+   +    K+LI +  +  + MHD+L++MGRE+VR+ES   P KR+RLW  
Sbjct: 502 --ESDNSVVVGLERLKDKALITISKYNVVSMHDILQEMGREVVRQESSEDPSKRSRLWDP 559

Query: 445 KDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN-KCMVSH 503
            DI  VLK + GT+AI  I +D++   R++ ++ + F+KM  LR+L F G  + + +   
Sbjct: 560 DDICYVLKNDKGTDAIRSIRVDLSSF-RKLKLSPHVFAKMTNLRYLDFIGKYDLELLPQG 618

Query: 504 LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ--------RLP 553
           L+  P  ++R++ W   PLK+       + LV L    ++VE LW  VQ        RL 
Sbjct: 619 LQSFP-TDLRYICWIHYPLKSFPKKFSGKNLVILDFSHSRVENLWCGVQDLVNLKEVRLT 677

Query: 554 SSLCTFKTP--------ITFEIIDCKMLERLPDELENLEYL------------------- 586
           SS    + P            I DC  LE +   + +LE L                   
Sbjct: 678 SSRFLKELPDFSKATNLKVLNITDCLSLESVHPSIFSLEKLVQLDLSHCFSLTTFTSNSH 737

Query: 587 ----------------TVKGTT------------IRELPESLGRLSWVKRLILSNNSNLE 618
                           T   TT            I ELP SL R      +++   S +E
Sbjct: 738 LSSLLYLNLGSCISLRTFSVTTNNLIKLDLTDIGINELP-SLFRCQSKLEILVLRKSEIE 796

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--PAGLS------ 670
            IP SI++L++L  L I +C +L  LP LP ++  L    C SL+ +  P+ +S      
Sbjct: 797 IIPSSIQNLTRLRKLDIRYCLKLLALPVLPLSVETLLVE-CISLKTVLFPSTISEQFKEN 855

Query: 671 ---------------SMSSV---LYVNLCNF-----LKLDPNELSEIVKDGWMKHSLYEE 707
                          S+ ++   + +NL  F     L L+ ++  +   D    HS Y+ 
Sbjct: 856 KKRIEFWNCFNLDEHSLVNIGFNMKINLIKFAYQHLLTLEHDDYVDSYADYEYNHSSYQA 915

Query: 708 RGIKKSMYFPGNEIPKWFRHQS 729
             +     +PG+ +P+W  +++
Sbjct: 916 LYV-----YPGSSVPEWLEYKT 932


>gi|297734814|emb|CBI17048.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 240/676 (35%), Positives = 367/676 (54%), Gaps = 75/676 (11%)

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRKRF----PEKMKRWKNALTEAADLSGFDSNVIRPE 127
            FY VDPS VR Q+  +G  F+   K       EK+++WK AL +A++L+G+D+   R E
Sbjct: 6   IFYHVDPSEVRNQTEIYGEAFTHHEKNAEEERKEKIRKWKTALRQASNLAGYDATN-RYE 64

Query: 128 SKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISK 187
           S+LI+EI  +VL+    T    N+ +VG++  +E + SLL I    V  + ++G+GGI K
Sbjct: 65  SELIDEIIENVLRSFPKTLVV-NENIVGMDSRLERLISLLKIELNDVRMVGVYGLGGIGK 123

Query: 188 ITIAGAVFNKISRHFEGSYFALNVR-EAEETGGIKDLQKKLLSELSKDGN---MRNIESQ 243
            TI  A++N+IS  FE      +VR E+ E  G+  LQ++LL++  +      +R++   
Sbjct: 124 TTIINALYNRISNQFESVSLLTDVRKESTENSGLLKLQQQLLNDTLRTTRKIVLRDVHEG 183

Query: 244 L----NRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKK 283
           +    ++L+ KKV +  DDV                  GSR+IITTR K +L     N  
Sbjct: 184 IKEIRDKLSSKKVLVFLDDVDELTQLEHLIGKHDWFGPGSRIIITTRKKDLLTRHEVNDM 243

Query: 284 YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
           Y +++L + +A +LFC++AF   H    + +L+ + ++YA G+PLALKVLG  L G+   
Sbjct: 244 YEVEKLYFHEALQLFCRYAFKQHHPKEGYGDLSHQVVQYADGLPLALKVLGSLLFGKRLP 303

Query: 344 VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-- 401
            W+S ++KLE +P++EI +VLKIS+D LD +Q+ +FLDIACF  G+    V  I DAS  
Sbjct: 304 DWKSELQKLEKVPNMEIVKVLKISFDGLDYTQRMIFLDIACFFRGDDVKRVSRILDASEF 363

Query: 402 -----------KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                      +  I +    RI MHDLL  MG+ IV +E  N PG+R+RLW H DIY+V
Sbjct: 364 NAESGINALVDRCFITISKDNRIDMHDLLAQMGKGIVDQECPNEPGERSRLWRHIDIYRV 423

Query: 451 LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA 510
           LK+NTGTE IEGI L ++K + +I   S AF +M +LR L      N   +S     P+ 
Sbjct: 424 LKRNTGTEKIEGIYLHVDK-SEQIQFTSKAFERMHRLRLLSI--SHNHVQLSKDFVFPY- 479

Query: 511 EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW--------------DDVQRLPS 554
           ++ +L W    L++L  N  A  LVSL +  + ++ LW               D Q+L  
Sbjct: 480 DLTYLRWNGYSLESLPSNFHANNLVSLILGNSNIKLLWKGNMCLRNLRRINLSDSQQLIE 539

Query: 555 SLCTFKTPITFEII--DCKMLERLPDEL-ENLEYLTVKGTTIREL---PESLGRLSWVKR 608
                  P   E+I   C  LE LP ++ E+   LT+  T   +L   P+    ++ ++ 
Sbjct: 540 LPNFSNVPNLEELILSGCVSLESLPGDIHESKHLLTLHCTGCSKLASFPKIKSNIAKLEE 599

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKL 665
           L L + + ++ +P SI  L  L +L + +C+ L+ LP   CNL    +LS   C+ L++L
Sbjct: 600 LCL-DETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRL 658

Query: 666 PAGLSSMS--SVLYVN 679
           P  L  M    VLY+N
Sbjct: 659 PEDLERMPCLEVLYLN 674


>gi|10178211|dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
          Length = 1130

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 262/759 (34%), Positives = 389/759 (51%), Gaps = 85/759 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG D R NF SHL+  L    I TF+DD +L RG+ IS  LL  IE S I I+
Sbjct: 14  YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 73

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + ++ YASS W                       F  VDPS +R Q  S+ + FS+ +  
Sbjct: 74  VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 133

Query: 99  FP-EKMKRWKNALTEAADLSGFD-SNVI---RPESKLIEEIANDVLKRLDATFQSKNKGL 153
            P  K+K W+ ALT+ A++SG+D  N I   R E++ I +I  ++LKRL   +       
Sbjct: 134 HPLNKLKDWREALTKVANISGWDIKNRIYDSRNEAECIADITREILKRLPCQYLHVPSYA 193

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+   ++ I SLL IGS+GV  + I+G+GGI K T+A   FN+ S  FEGS F  N RE
Sbjct: 194 VGLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFRE 253

Query: 214 -AEETGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARKK-----------------VR 253
            +++  G   LQ +LLS++ +  D   + ++  +    R K                   
Sbjct: 254 YSKKPEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAA 313

Query: 254 IVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
           I  D    GSR+IITTR+  +LK   A   Y  KEL   ++ +LF   AF         +
Sbjct: 314 IDRDCFGHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFL 373

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           + +++ + Y  G+PLA++VLG +L  RS   WES ++ L+ IP+  I+  L+IS+++L  
Sbjct: 374 QHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNALTI 433

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASKSL--INLDLFYR----------IRMHDLLRD 421
            QK+VFLDIACF  G     V  I D       I L L             I MHDLLRD
Sbjct: 434 EQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRD 493

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IVR+ S    G+R+RLW H D+  VLKK +GT AIEG+SL  + ++ + +    AF
Sbjct: 494 MGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQ-YFEVEAF 552

Query: 482 SKMPKLRFLRF-YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMP 538
           +KM +LR L   Y D N       E  P  ++R L W    L+   +N+  E L +L + 
Sbjct: 553 AKMQELRLLELRYVDLN----GSYEHFP-KDLRWLCWHGFSLECFPINLSLESLAALDLQ 607

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT-VKGTTIRE 595
            + +++ W   Q  P      K     ++     L   PD     N+E L  +   ++  
Sbjct: 608 YSNLKRFW-KAQSPPQPANMVK---YLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVL 663

Query: 596 LPESLGRLSWVKRLILSNNSN---LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + +S+G L   K+L+L N S+   L+ +PE I  L  L  LF+S+C +L+ L +    L 
Sbjct: 664 VHKSIGILD--KKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELE 721

Query: 653 LLSA--RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLD 687
            L+    + T+L ++P+ ++ +  +  L +N C  L  D
Sbjct: 722 SLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSD 760



 Score = 42.4 bits (98), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 37/192 (19%)

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +PE +G LS+++ L L  NS    +P     L  L  L +S C +LQ++  LP +L  L 
Sbjct: 802 IPEDIGSLSFLRDLDLRGNS-FCNLPTDFATLPNLGELLLSDCSKLQSILSLPRSLLFLD 860

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL-------DPNELSEIVKDG---------- 698
              C  L++ P  +S  S++  + L + + L       +   LS IV DG          
Sbjct: 861 VGKCIMLKRTP-DISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLASTDTTI 919

Query: 699 ------WMKHSLYEERGIKKSMYFP---GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                 W+K +        + +Y P    N IP W   +    S ++    P     + +
Sbjct: 920 NTMLENWLKRN-------HECIYIPVDRPNVIPNWVYFEEEKRSFSITV--PETDNSDTV 970

Query: 750 ISFAFCAVVVFP 761
           + F      V P
Sbjct: 971 VGFTLWMNFVCP 982


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 254/721 (35%), Positives = 383/721 (53%), Gaps = 84/721 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEAS--CIA 58
           YDVFLSFRG DTR NFT HL+  L+   I+TF DD +L +G +I+  LL  IE S  C+ 
Sbjct: 20  YDVFLSFRGSDTRRNFTDHLYTTLTASGIQTFRDDKELEKGGDIASDLLRAIEESRWCLN 79

Query: 59  IIIF-----SERYASSRWFFYRVDPSHVRKQSHSFGRHFS-RLRKRFPEKM---KRWKNA 109
            ++      S++ +     FY VDPS VR Q  SFG   +   R    EKM   ++W+ A
Sbjct: 80  ELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDANQEKMEMIQKWRIA 139

Query: 110 LTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCI 169
           L EAA+LSG   N  + E+++++EI + +++RL+    S  + +VG+   +E+++SL+  
Sbjct: 140 LREAANLSGCHVND-QYETQVVKEIVDTIIRRLNHHPLSVGRSIVGIGVHLEKLKSLMNT 198

Query: 170 GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLS 229
               V  + I+GIGG+ K TIA A++N+IS  ++G  F  N++E  +             
Sbjct: 199 KLNMVSVVGIYGIGGVGKTTIAKAIYNEISDQYDGRSFLRNIKERSK------------- 245

Query: 230 ELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKEL 289
                            LA +K     D   + S +IIT+RDK VL     +  Y + +L
Sbjct: 246 ---------------EYLAEEK-----DWFQAKSTIIITSRDKHVLARYGVDIPYEVSKL 285

Query: 290 VYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAM 349
              +A +LF  WAF  +H    +  L+   I YA G+PLALKVLG  L G+    WESA+
Sbjct: 286 NKEEAIELFSLWAFKQNHPKKVYKNLSYNIIDYANGLPLALKVLGASLFGKKISEWESAL 345

Query: 350 RKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDL 409
            KL+IIPH+EI  VL+IS+D LDD  K +FLD+ACF +G+ +D V  I       +   L
Sbjct: 346 CKLKIIPHMEIHNVLRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRILGPHAEHVITTL 405

Query: 410 FYR---------IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI 460
            YR         + MHDL++ MG E++R+E    PG+R+RLW   + Y VL  NTGT AI
Sbjct: 406 AYRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLW-DSNAYHVLIGNTGTRAI 464

Query: 461 EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV-SHL-EGVPFA--EVRHLE 516
           EG+ LD         + + +F +M +LR L+ +  + K  +  HL     F+  E  +L 
Sbjct: 465 EGLFLDR-------WLTTKSFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYEYTYLH 517

Query: 517 WPQCPLKT--LNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLE 574
           W + PL++  LN  A+ LV L +  + ++QLW    +L   L       +  +I      
Sbjct: 518 WDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRG-SKLHDKLRVIDLSYSVHLI------ 570

Query: 575 RLPD--ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           R+PD   + NLE LT++G +IR+LP S+  L+ ++ L+L     L +IP  I HLS L  
Sbjct: 571 RIPDFSSVPNLEILTLEG-SIRDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKE 629

Query: 633 LFISHCERLQ-TLPELPCNLGLLSARNCTS--LEKLPAGLSSMSSVLYVNL--CNFLKLD 687
           L + HC  ++  +P   C+L  L   N        +P  ++ +S +  +NL  CN L+  
Sbjct: 630 LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQI 689

Query: 688 P 688
           P
Sbjct: 690 P 690



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 61/270 (22%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPS +C FK+  T     C  L+  PD   ++ENL  L +  T I+E+P S+ RL 
Sbjct: 961  NLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRNLYLDRTAIKEIPSSIERLR 1020

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP------------------- 645
             ++ L L N  NL  +P+SI +L+ L  L +  C   + LP                   
Sbjct: 1021 GLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCPNFKKLPDNLGRLQSLLHLRVGHLDS 1080

Query: 646  ---ELP-----CNLGLLSARNC------------TSLEKL----------PAGLSSMSSV 675
               +LP     C+LG L    C            +SLE+L          P G+S + ++
Sbjct: 1081 MNFQLPSLSGLCSLGTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNL 1140

Query: 676  LYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIK----KSMYFPGNEIPKWFRHQS 729
             +++L  C  L+  P EL   V+   ++  ++ + G K     +     N IP+W  HQ 
Sbjct: 1141 TFLDLSHCKMLQHIP-ELPSGVRRHKIQRVIFVQ-GCKYRNVTTFIAESNGIPEWISHQK 1198

Query: 730  MGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
             G   T+K  P      +  +    C+++V
Sbjct: 1199 SGFKITMKL-PWSWYENDDFLGVVLCSLIV 1227


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 273/845 (32%), Positives = 419/845 (49%), Gaps = 123/845 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT +L+  L    I+TF D++ L +G  I+  L   I+ S I +I
Sbjct: 19  YDVFLSFRGVDTRKNFTDYLYTTLVRYGIQTFRDNEELEKGGIIASDLSRAIKESRIFMI 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA SRW                      FY VDPS +RKQS  FG   +   +  
Sbjct: 79  IFSKNYAYSRWCLNELVKITECARQEGSMVLPIFYHVDPSDIRKQSGIFGDALAHHERDA 138

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            EK K    +W+ ALTEAA LSG+  +  + E++++ EI N ++  L     + ++ +VG
Sbjct: 139 DEKKKEMIQKWRTALTEAASLSGWHVDD-QFETEVVNEIINTIVGSLKRQPLNVSENIVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++ ++      V  + I G GGI K TIA A++NKIS  ++ S F  N+RE  
Sbjct: 198 ISVHLEKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLRNIREKS 257

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDV---------- 259
           + G    LQ +LL ++ K+   +  NI+  +  + R    K+V ++ DDV          
Sbjct: 258 Q-GDTLQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQLKHLA 316

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDKQVL     +  Y +++    +A +LF  WAF  +    ++ 
Sbjct: 317 EKKDWFNAKSTIIITSRDKQVLARYGVDTPYEVQKFDKKEAIELFSLWAFQENLPKEAYE 376

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD
Sbjct: 377 NLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDD 436

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRDMG 423
             K +FLD+ACF +G+ +D V  I              K LI +     + MHDL++ MG
Sbjct: 437 MDKEIFLDVACFFKGKSKDFVSRILGPHAEYGIATLNDKCLITISK-NMMDMHDLIQQMG 495

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EI+R+E  +  G+R+R+W   D Y VL +N GT +I+G+ LD+ K   +    S  F +
Sbjct: 496 KEIIRQECPDDLGRRSRIW-DSDAYDVLTRNMGTRSIKGLFLDICKFPTQFTKES--FKQ 552

Query: 484 MPKLRFLRFYGDKNKCMVS----HLEG-------------VPFAEVRHLEWPQCPLKTL- 525
           M +LR L+ + D     +S    HL+G              P  E+ +  W    L++L 
Sbjct: 553 MDRLRLLKIHKDDEYGCISRFSRHLDGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLP 612

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
            N  A+ LV L +  + ++QLW    +L + L       +  + +      +P    NLE
Sbjct: 613 TNFHAKDLVELILRGSNIKQLWRG-NKLHNKLNVINLSHSVHLTEIPDFSSVP----NLE 667

Query: 585 YLTVKGTTIRE-LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            LT+KG    E LP  + +   ++ L   + S L+R PE   ++ KL  L +S       
Sbjct: 668 ILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSG----TA 723

Query: 644 LPELPCN--------LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
           + ELP +        L +LS R C+ L K+P     +      +L        N+ S+  
Sbjct: 724 IEELPSSSSFGHLKALKILSFRGCSKLNKIPTDTLDLHGAFVQDL--------NQCSQNC 775

Query: 696 KDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAF 754
            D     S Y   GI   +  PG+  +P+W     M    T++  P      N+ + FA 
Sbjct: 776 ND-----SAYHGNGI--CIVLPGHSGVPEW-----MMERRTIEL-PQNWHQDNEFLGFAI 822

Query: 755 CAVVV 759
           C V V
Sbjct: 823 CCVYV 827



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 79/287 (27%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LPSS+C FK+  T     C  LE  P+ LE++E L    + G+ I+E+P S+ RL  
Sbjct: 1011 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1070

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE------------------- 646
            ++ L L+   NL  +PESI +L+ L  L I  C  L+ LPE                   
Sbjct: 1071 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1130

Query: 647  ---LP-----CNLGLLSARNC------------TSLEKL----------PAGLSSMSSVL 676
               LP     C+L +L   NC            TSL+ L          P G+S +  ++
Sbjct: 1131 NCQLPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSKPDGISQLHKLI 1190

Query: 677  YVNL--CNFLKLDPNELSEIVK-----------DGWMKHSLYEERGIKKSMYFPG----- 718
             +NL  C  L+  P   S ++               +  S + + GI+K  + PG     
Sbjct: 1191 VLNLSHCKLLQHIPEPPSNLITLVAHQCTSLKISSSLLWSPFFKSGIQK--FVPGVKLLD 1248

Query: 719  ------NEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
                  N IP+W  HQ  GS  TL T P      +  + FA C++ V
Sbjct: 1249 TFIPESNGIPEWISHQKKGSKITL-TLPQNWYENDDFLGFALCSLHV 1294


>gi|357513279|ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520950|gb|AET01404.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1087

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 250/775 (32%), Positives = 394/775 (50%), Gaps = 96/775 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           ++DVF++FRG+DTR  F SHL+  L+   I TF+DD+ L +G+ +   L+  I+ S IAI
Sbjct: 13  IHDVFINFRGKDTRKTFVSHLYAALTDAGINTFLDDENLKKGEELGPELVRAIQGSQIAI 72

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++FS+ Y +S W                      F  + PS++R+ S         L   
Sbjct: 73  VVFSKNYVNSSWCLNELEQIMKCKADNGQVVMPVFNGITPSNIRQHSPVI------LVDE 126

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             + +   K AL + + L+G+D +    +SK+++EI + VLK LD  +       VG++ 
Sbjct: 127 LDQIIFGKKRALRDVSYLTGWDMSNYSNQSKVVKEIVSQVLKNLDKKYLPLPNFQVGLKP 186

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
             E+    L   +  VC + IWG+GGI K TIA  ++N +   FE   F  N+RE  E+ 
Sbjct: 187 RAEKPIRFLRQNTRKVCLVGIWGMGGIGKSTIAKVIYNDLCYEFEDQSFVANIREVWEKD 246

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVTS---------- 261
            G  DLQ++LLS++ K   ++ +  +        RL  K++  V DDV+           
Sbjct: 247 RGRIDLQEQLLSDILKTRKIKVLSVEQGKAMIKQRLRSKRILAVLDDVSELEQFNALCEG 306

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GS +IITTRD +VL     +  Y  + L  +++ +LFC  AF         + L+
Sbjct: 307 NSVGPGSVIIITTRDLRVLNILEVDFIYEAEGLNASESLELFCGHAFRKVIPTEDFLILS 366

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS-Q 375
              + Y  G+PLAL+VLG YL  R K+ W+S + KLE IP+ +I E LKIS++ L D  +
Sbjct: 367 RYVVAYCGGIPLALEVLGSYLLKRRKQEWQSVLSKLEKIPNDQIHEKLKISFNGLSDRME 426

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           K++FLD+ CF  G+ R  V  I +               +SLI ++   ++ MHDLLRDM
Sbjct: 427 KDIFLDVCCFFIGKDRAYVTKILNGCGLHADIGITVLIERSLIKVEKNKKLGMHDLLRDM 486

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREIVR+ S   P KR RLW H+D+  VL+ +TGT+AIEG+ + + K NR +  ++ AF 
Sbjct: 487 GREIVRESSPEEPEKRTRLWCHEDVVNVLEDHTGTKAIEGLVMKLPKTNR-VCFDTIAFE 545

Query: 483 KMPKLRFLRF-----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           KM +LR L+       GD  KC   HL        R L W   PLK    N   + +V++
Sbjct: 546 KMKRLRLLQLDNVQVIGDY-KCFSKHL--------RWLSWQGFPLKYTPENFYQKNVVAM 596

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TT 592
            +  + + Q+W    + P  +   K      +   K L+R PD  +L NLE L +K   +
Sbjct: 597 DLKHSNLTQVW----KKPQLIEGLK---ILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQS 649

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC--- 649
           + E+  S+G L  +  L L + ++L  +P  I  L  +  L +S C ++  L E      
Sbjct: 650 LLEVHPSIGDLKNLLLLNLKDCTSLSNLPREIYQLRTVETLILSGCSKIDKLEEDIVQME 709

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
           +L  L A N T +++ P  +    S+ Y++LC +  L  +    +++  WM  ++
Sbjct: 710 SLTTLMAAN-TGVKQPPFSIVRSKSIGYISLCGYEGLSHHVFPSLIR-SWMSPTM 762


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 254/773 (32%), Positives = 387/773 (50%), Gaps = 93/773 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++ VFLSFRGED R    SH+        I  FID+++ RG +I   LL  I  S IAII
Sbjct: 39  LHPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAII 98

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y SS+W                      FY VDPS VRKQ   FG+ F +     
Sbjct: 99  LLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGR 158

Query: 100 PEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           PE+M +RWK ALT AA++ G DS     E+ +I +I+ DV   L  T        VG+E 
Sbjct: 159 PEEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEA 218

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
              EI SLL +  E V  + IWG  GI K TI+  ++NK+   F+      N++      
Sbjct: 219 HTTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRP 278

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQK+LLS++   KD  + ++     RL  KKV +V DDV           
Sbjct: 279 CHDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAK 338

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+ T+D ++LK       Y++      +A ++FC +AFG         +
Sbjct: 339 DVQWFGLGSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQ 398

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +       A  +PL L+V+G YL   SK+ W  ++ +L      +IE VLK SY+SL + 
Sbjct: 399 IARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQ 458

Query: 375 QKNVFLDIACFLEGEHRDEVISIF--------------DASKSLINLDLFYRIRMHDLLR 420
           +K++FL I CF   E R E + +F               A KSL++L+L   I MH+LL 
Sbjct: 459 EKDLFLHITCFFRRE-RIETLEVFLAKKSVDVRQGLQILADKSLLSLNL-GNIEMHNLLV 516

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV-NREIHMNSY 479
            +G +IVRK+SI+ PGKR  L   +DI +VL  +TGT  + GI L+++ V    I+++  
Sbjct: 517 QLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISER 576

Query: 480 AFSKMPKLRFLRF---YGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKL 532
           AF +M  L+FLRF   YGD+   ++   +G+     ++R L W + PL  L      E L
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFL 636

Query: 533 VSLKMPCTKVEQLWD------DVQRLPSSLCT-------FKTPITFE---IIDCKMLERL 576
           V + M  + +E+LWD      +++ +  S C        F T    +   +I+C  L  L
Sbjct: 637 VKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVEL 696

Query: 577 PDELEN----LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           P  + N    LE   +  +++ +LP S+G L+ +K+L L+  S+L ++P S  +++ L  
Sbjct: 697 PSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKE 756

Query: 633 LFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L +S C  L  +P       NL  L A  C+SL +LP+ + + +++  ++L N
Sbjct: 757 LNLSGCSSLLEIPSSIGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLN 809



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 43/228 (18%)

Query: 553  PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRL 609
            PSS+          +  C  L +LP    + NL+ L +   +++ ELP ++   + +  L
Sbjct: 817  PSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTL 876

Query: 610  ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLP 666
             L   SNL  +P SI +++ L  L+++ C  L+ LP L     NL  LS   C+SL +LP
Sbjct: 877  YLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELP 936

Query: 667  AGLSSMSSVLYVNLCNF-----------------LKLDPNELSEIVK--DGWMKH----- 702
            + +  +S++ Y+++ N                  L LD  +   +V+  D + ++     
Sbjct: 937  SSIWRISNLSYLDVSNCSSLVELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVL 996

Query: 703  -------------SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
                          L  +    ++   PG ++P +F +++ G S T+K
Sbjct: 997  NFANCFKLNQEARDLIIQTSACRNAILPGEKVPAYFTYRATGDSLTVK 1044


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 269/771 (34%), Positives = 395/771 (51%), Gaps = 119/771 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFR +DTR+NFTSHL+  L  + +  ++DD +L RG  I  +L   IE S  ++
Sbjct: 1   MYDVFLSFRDKDTRNNFTSHLYSNLKQRGVDVYMDDRELERGKTIEPALWKAIEESRFSV 60

Query: 60  IIFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGF 119
           IIFS  YASS W    +                  +++R   KMK+W   +     +   
Sbjct: 61  IIFSRDYASSPWCLDEL------------------IKQR--RKMKKWVVKICVVRSVCDI 100

Query: 120 DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE------- 172
            +     ES+ I+ IA  +  +L  T  + +K LVG++  ++ +     IG E       
Sbjct: 101 SAPQGANESESIKIIAEYISYKLSITLPTISKKLVGIDSRLQVLNGY--IGEEVGKAIFI 158

Query: 173 GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--AEETGGIKDLQKKLLSE 230
           G+C     G+GG+ K T+A  V+++I   FEGS F  NV+E  A E G  + LQ++LLSE
Sbjct: 159 GIC-----GMGGLGKTTVARVVYDRIRWQFEGSCFLANVKEDFAREDGP-RRLQEQLLSE 212

Query: 231 LSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITT 269
           +  +      + R IE    RL  KK+ ++ DDV                  GSR+IIT+
Sbjct: 213 ILMERASVWDSYRGIEMIKRRLRLKKILLILDDVDEKEQLEFLAAESKWFGPGSRIIITS 272

Query: 270 RDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLA 329
           RDKQVL      + Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLA
Sbjct: 273 RDKQVLTRNGVARIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYATGLPLA 332

Query: 330 LKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGE 389
           L+V+G ++ GRS   W SA+ +L  IP  EI +VL+IS+D L +S K +FLDIACFL G 
Sbjct: 333 LEVIGSFMHGRSILEWGSAINRLNDIPDREIIDVLRISFDGLHESDKKIFLDIACFLMGF 392

Query: 390 HRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPG 436
             D +  I ++              +SLI++    ++ MH+LL+ MG+EIVR ES   PG
Sbjct: 393 KIDRITRILESRGFNAGIGISVLIERSLISVS-RDQVWMHNLLQIMGKEIVRCESPEEPG 451

Query: 437 KRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK 496
           +R+RLW +KD+   L  NTG E IE I LDM  + +E   N  AFSKM +LR L+ +   
Sbjct: 452 RRSRLWTYKDVCLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSRLRLLKIHN-- 508

Query: 497 NKCMVSHLEGVPFA---EVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWD---- 547
               V   EG P A   E+R LEW   P K+L  C   ++LV L M  + +EQLW     
Sbjct: 509 ----VQLSEG-PEALSNELRFLEWNSYPSKSLPACFQMDELVELHMANSSIEQLWYGYKS 563

Query: 548 ----DVQRLPSSLCTFKTPITFEIID--------CKMLERLPDEL---ENLEYLT-VKGT 591
                +  L +SL   KTP    I++        C  L  +   L   + L+Y+  VK  
Sbjct: 564 AVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCK 623

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH------CERLQTLP 645
           +IR LP +L  +  +K   L   S LE+ P+ + +++ LT L +        C  +  L 
Sbjct: 624 SIRILPNNL-EMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHL- 681

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
                LGLLS  +C +LE +P+ +  + S+  ++L  C+ LK  P  L ++
Sbjct: 682 ---IGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKV 729



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 40/179 (22%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKGTTIRELPESLGRLS 604
           +++ +PSS+   K+    ++  C  L+ +P+ L   E+LE   V GT+IR+LP S+  L 
Sbjct: 694 NLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLK 753

Query: 605 WVKRL------------------------------------ILSNNSNLERIPESIRHLS 628
            +K L                                    +  + +N   +P+SI  LS
Sbjct: 754 NLKVLSSDGCERIAKLPSYSGLCYLEGALPEDIGYSSSLRSLDLSQNNFGSLPKSINQLS 813

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC-NFLKL 686
           +L  L +  C  L++LPE+P  +  ++   C  L+++P  +   SS +   +C N L+L
Sbjct: 814 ELEMLVLKDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIELSSSKISEFICLNCLEL 872


>gi|356524164|ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1248

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 252/748 (33%), Positives = 394/748 (52%), Gaps = 102/748 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR  FT  L+  L  + I TF+DD+ L RG+ I  +L   I+ S IAI+
Sbjct: 16  YDVFLSFRGDDTRSGFTGSLYKSLCDQGIHTFMDDEGLRRGEEIRHALFKAIQQSRIAIV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YASS +                      FY V PS+VR Q  S+G+   +L +RF
Sbjct: 76  VFSENYASSTYCLEELVMILECIMKKGRLVWPVFYGVTPSYVRHQKGSYGKALDKLGERF 135

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK+++WK AL EAA+LSG    +    E ++I++I  +V ++++ +        +G
Sbjct: 136 KNDKEKLQKWKLALQEAANLSGSHFKLKHGYEHEVIQKIVEEVSRKINRSPLHVANYPIG 195

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  ++E+ SLL +GS +GV  + I+GIGGI K  IA AV+N I+  FEG  F  ++RE 
Sbjct: 196 LESRVQEVNSLLDVGSNQGVSMVGIYGIGGIGKTAIACAVYNLIADQFEGQCFLGDIREK 255

Query: 215 EETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS------- 261
            + G + +LQ+ +LSE+  + ++      R      ++L RKKV ++ DDV         
Sbjct: 256 SKHGLV-ELQETILSEMVGEKSIKLGSTNRGKAVLKSKLQRKKVLLILDDVDRLEQLKAL 314

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+I+TT DK +L+     ++Y  K L   +A +LF   AF  + +  S+
Sbjct: 315 AGDPSWFGHGSRIIVTTTDKHLLRVHGVERRYEAKGLDDKEALELFSWHAFKSNEVSPSY 374

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++++ +A+ Y+ G+PLAL+++G  L G++   W++A+  +E  P  +I+E LK+ YD L 
Sbjct: 375 MDISKRAVLYSNGLPLALEIIGSNLNGKTMPEWQAALDTIERNPDEDIQEKLKVGYDGLK 434

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS--------------KSLINLDLFYRIRMHDL 418
            ++K VFLDIACF  G    +V S+                  KSLI +D +  +RMH+L
Sbjct: 435 RNEKEVFLDIACFFRGSDLKDVTSLLFQGRGFSPEYVIRVLIDKSLIKIDKYGFVRMHNL 494

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + +MGREIV++ES + PGKR+RLW ++DI  VL+ + GT+ IE I L   K N+E+  N 
Sbjct: 495 VENMGREIVKQESPSEPGKRSRLWLYEDIVDVLENDKGTDTIEVIMLHSPK-NKEVQWNG 553

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
               KM  L+ L            HL       +R L+W   P  +L     + +LV L 
Sbjct: 554 SELKKMTNLKLLSIENAHFSRGPVHLPN----SLRVLKWWGYPSPSLPPEFDSRRLVMLD 609

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IRE 595
           +                S+ C          I  K L+ +  + E+L  + ++G   I++
Sbjct: 610 L----------------SNSCN---------IMGKQLKFM--KFESLSEMVLRGCRFIKQ 642

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGL 653
            P+  G  + +K+L L N  NL  + +SI  L K+T+     C  L+ LP      +L  
Sbjct: 643 TPDMSGAQN-LKKLCLDNCKNLVEVHDSIGLLDKITWFTAVGCTNLRILPRSFKLTSLEH 701

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNLC 681
           LS + C++L+ LP  L  M  V  ++LC
Sbjct: 702 LSFKKCSNLQCLPNILEEMKHVKKLDLC 729



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 87/296 (29%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
            P    N+E+L + G+  + LP+ + +  ++K L+L N                       
Sbjct: 813  PASFPNVEFLVLTGSAFKVLPQCISQCRFLKNLVLDN----------------------- 849

Query: 637  HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
             C+ LQ +  +P  +  LSA NCTS       LS  S  + +N                 
Sbjct: 850  -CKELQEIRGVPPKIKYLSAINCTS-------LSHESQSMLLN----------------- 884

Query: 697  DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
                   L+E  G   S+  PG  IP+WF H + G   +   R       NK    A   
Sbjct: 885  -----QRLHEGGGTDFSL--PGTRIPEWFDHCTTGPLLSFWFR-------NKFPRMALAV 930

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG-- 814
            V V             +  +  + + +  +  +K    L+  F  + S + + H+FL   
Sbjct: 931  VGVL----------DKQGSFPMSRFHLLINGIQK----LHCLFTAQ-SKLTTYHIFLSDV 975

Query: 815  -CNSFGGEYF------GPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSA 863
               S+ GE        G N+ E S+    +F      +RG +K  G+H VY Q ++
Sbjct: 976  QLKSYNGELQSVYGEDGWNHVEISYVRPSAFPHSCRAKRGTIKLMGVH-VYKQKTS 1030


>gi|359493295|ref|XP_002273513.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 577

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 212/554 (38%), Positives = 318/554 (57%), Gaps = 71/554 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFT HL+  L+ + I TF DD+ L RG  I  SLL  IE S I+++
Sbjct: 13  WDVFLSFRGEDTRFNFTDHLYSALTSRYIHTFRDDEGLERGGEIQPSLLKAIEDSMISVV 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR- 98
           +FSE YA S+W                      FY VDPS VRKQ+ SFG  F+R  +  
Sbjct: 73  VFSENYAHSKWCLDELEKIMQCSREKGQKVLPIFYHVDPSDVRKQTGSFGEAFARYGRYG 132

Query: 99  --FPEKMKRWKNALTEAADLSG------FDSNVIRPESKLIEEIANDVLKRLDATFQSKN 150
               E++ RW+ AL++A  L+G      ++S +I+    ++  I+  ++ R +  F   N
Sbjct: 133 NVTEERVLRWRAALSQAGGLAGWHVMHGYESQIIKV---IVRRISKMLISRPELLFIGDN 189

Query: 151 KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
             LVG+   +EE+ SLLC+ S  V  + I GI GI K T+A  ++N+I+  FEG+ F  N
Sbjct: 190 --LVGINSRLEEMSSLLCMESNDVRMIGIHGIAGIGKTTLAKGIYNQIAHQFEGASFLSN 247

Query: 211 VREAEETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT---- 260
           V E +E  G   LQ++LL+++   K   + NI+  ++     L  +KV I+ DDV+    
Sbjct: 248 VAEVKEHRGSLKLQRQLLADILGEKIARISNIDEGISLIKKTLCSRKVLIILDDVSALTQ 307

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       SGSR+IIT+R+K +L     +  Y +++L   +A KLF  +AF  DH 
Sbjct: 308 LEFLAGSRHWFGSGSRIIITSRNKHLLDVLEVDGLYEVQKLKSEEAFKLFSLYAFEADH- 366

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D    EL+ +A+ Y  G+PLA+KV+G YL  +++  WE  + KL  +  + ++ VL++SY
Sbjct: 367 DDGFWELSGRALNYCDGLPLAVKVVGGYLRNKTELEWEDELLKLTTVGQITVQYVLRLSY 426

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDASK-SLINLDLFY----------RIRMHD 417
           D L+ ++K++FLDIACF  G+  D V  I D+   S I + +            +I MH 
Sbjct: 427 DRLEHTEKDLFLDIACFFRGKDSDSVGRILDSCNFSAIGMKVLKDCSFISILDNKIEMHG 486

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++ M  EI+R+ES   PG+R+RLW+ +D++ VL + TGT+AIEGIS D++  ++EI + 
Sbjct: 487 LMQQMEWEIIRRESPGQPGQRSRLWNPEDVHAVLTQKTGTKAIEGISFDVS-ASKEIQIT 545

Query: 478 SYAFSKMPKLRFLR 491
           S A  KM  LR LR
Sbjct: 546 SEALKKMTNLRLLR 559


>gi|27764546|gb|AAO23076.1| R 1 protein [Glycine max]
          Length = 902

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 262/754 (34%), Positives = 379/754 (50%), Gaps = 110/754 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAI 59
           +YDVFL+FRGEDTR  FT +L+  L  K I TF D D+L  GD+I+ +L   I+ S IAI
Sbjct: 11  IYDVFLNFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGDDITPALSKAIQESRIAI 70

Query: 60  IIFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ YASS +                     F+ VDPS VR    S+G   ++ +KRF
Sbjct: 71  TVLSQNYASSSFCLDELVTILHCKREGLLVIPVFHNVDPSAVRHLKGSYGEAMAKHQKRF 130

Query: 100 P---EKMKRWKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+ AL + ADLSG+   D +    E K I  I  +V ++++          
Sbjct: 131 KAKKEKLQKWRMALHQVADLSGYHFKDGDAY--EYKFIGNIVEEVSRKINCAPLHVADYP 188

Query: 154 VGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   + E+  LL +GS+ +  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVR
Sbjct: 189 VGLGSQVIEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALAVYNFIALHFDESCFLQNVR 248

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS----- 261
           E     G+K  Q  LLS+L  + ++     Q       +RL RKKV ++ DDV       
Sbjct: 249 EESNKHGLKHFQSILLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLE 308

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +LK     + Y +K L +  A +L    AF  + +D 
Sbjct: 309 AIVGRSDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNHNAALQLLTWNAFKREKIDP 368

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            + ++ ++ + YA G+PLAL+V+G  L G++   WESA+   + IP  EI ++LK+S+D+
Sbjct: 369 IYDDVLNRVVTYASGLPLALEVIGSDLFGKTVAEWESAVEHYKRIPSDEILKILKVSFDA 428

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLF--YRIR 414
           L + QKNVFLDIAC  +G    EV  I  A               KSLI L+ +    + 
Sbjct: 429 LGEEQKNVFLDIACCFKGYKWTEVDDILRAFYGNCKKHHIGVLVEKSLIKLNCYDSGTVE 488

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DMGREI R+ S   P K  RLW  KDI+QVLK NTGT  IE I LD +  ++E 
Sbjct: 489 MHDLIQDMGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNTGTSKIEIICLDFSISDKEE 548

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
            +  N  AF KM  L+ L     K +K      EG+       LEW + P   L  N   
Sbjct: 549 TVEWNENAFMKMENLKILIIRNGKFSKGPNYFPEGLTV-----LEWHRYPSNCLPYNFHP 603

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
             L+  K+P + +          PS      T + F+   C+ L ++PD  +L NL+ L+
Sbjct: 604 NNLLICKLPDSSITSF---ELHGPSKFWHL-TVLNFD--QCEFLTQIPDVSDLPNLKELS 657

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
                            W + LI         + +SI  L+KL  L    C +L++ P L
Sbjct: 658 ---------------FDWCESLI--------AVDDSIGFLNKLKKLSAYGCRKLRSFPPL 694

Query: 648 P-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
              +L  L    C+SLE  P  L  M ++  ++L
Sbjct: 695 NLTSLETLQLSGCSSLEYFPEILGEMENIKALDL 728



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           R + V+ L LS N N   +PE  + L  L  L +S CE LQ +  LP NL    ARNC S
Sbjct: 821 RFTRVEYLDLSGN-NFTILPEFFKELQFLRALMVSDCEHLQEIRGLPPNLEYFDARNCAS 879

Query: 662 LEKLPAGLSSMSSVLYVNLCNFL 684
           L       SS  S+L   + +FL
Sbjct: 880 LT------SSTKSMLLNQVLSFL 896



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 564 TFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERI 620
           T ++  C  LE  P+   E+EN++ L + G  I+ELP S   L  + RL L N+  + ++
Sbjct: 701 TLQLSGCSSLEYFPEILGEMENIKALDLDGLPIKELPFSFQNLIGLCRLTL-NSCGIIQL 759

Query: 621 PESIRHLSKLTFLFISHCER 640
           P S+  + +L+   I +C R
Sbjct: 760 PCSLAMMPELSVFRIENCNR 779


>gi|227438165|gb|ACP30572.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1184

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 243/758 (32%), Positives = 383/758 (50%), Gaps = 95/758 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SFRGED R +F SH+      K I  FID+++ RG++I   L+  I  S IAII+
Sbjct: 60  HDVFPSFRGEDVRRDFFSHIQREFERKGITPFIDNEIKRGESIGPELIRAIRGSKIAIIL 119

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS+W                      F++VDPS V+K +  FG+ F +    + 
Sbjct: 120 LSRNYASSKWCLDELVEIMKCREEFGQTVMAIFHKVDPSDVKKLTGDFGKFFKKTCAGKA 179

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            + ++RW+ AL + A ++G+ S+    E+ +I++IA D    L+    S +  GLVG+  
Sbjct: 180 KDCIERWRQALAKVATIAGYHSSNWDNEADMIKKIATDTSNMLNNFTPSNDFDGLVGMGA 239

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF-----ALNVRE 213
             E ++S+LC+GS+ V  + IWG  GI K TIA   FN++S  F+ S F     A + R 
Sbjct: 240 HWENLKSILCLGSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANSSRL 299

Query: 214 AEETGGIK-DLQKKLLSELS--KDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
             +   +K  LQ++ +S+++  KD  + +     NRL  KKV +V D V           
Sbjct: 300 CSDDYSVKLQLQQQFMSQITDHKDMVVSHFGVVSNRLRDKKVLVVLDGVNRSVQLDAMAK 359

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT+D+++ +    N  Y +      +A ++FC + FG +       E
Sbjct: 360 ETWWFGPGSRIIITTQDQKLFRAHGINHIYEVNLPTNDEALQIFCTYCFGQNFPKYGFEE 419

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +    +  +PL L+V+G YL G SKE W +++ +L      +I+ +LK SYD+LDD 
Sbjct: 420 LAREVTSLSGELPLGLRVMGSYLRGMSKEDWTNSLPRLRDSLDTDIQSILKFSYDALDDE 479

Query: 375 QKNVFLDIACFLEGE-----------------HRDEVISIFDASKSLINLDLFYRIRMHD 417
            K++FL IACF   E                  R +V+    A KSLI++D   RIRMH 
Sbjct: 480 DKDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVL----AEKSLISID-SGRIRMHS 534

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHM 476
           LL  +GREIV K+SI+ PG+R  L+  +DI +VL    TG++++ GI  +  ++  EI +
Sbjct: 535 LLEKLGREIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEIDI 594

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           +  AF  M  L+FL+  G  +   ++        ++R LEW   P+  L   +  E LV 
Sbjct: 595 SEKAFEGMSNLQFLKVCGFTDALQITGGLNYLSHKLRLLEWRHFPMTCLPCTVNLEFLVE 654

Query: 535 LKMPCTKVEQLWD-----------------DVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           L MP +K+E+LW+                 +++ LP  L T        + DC  L +LP
Sbjct: 655 LVMPYSKLEKLWEGCKPLRCLKWMDLGYSVNLKELP-DLSTATNLEKLYLYDCSSLVKLP 713

Query: 578 DELEN-LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
               N LE L + G +++ E P  +G    ++ L LS+  NL  +P  + + + L +L +
Sbjct: 714 SMSGNSLEKLNIGGCSSLVEFPSFIGNAVNLQELDLSSFPNLLELPSYVGNATNLEYLDL 773

Query: 636 SHCERLQTLP---ELPCNLGLLSARNCTSLEKLPAGLS 670
            +C  +  LP        L  L  + C+ LE LP  ++
Sbjct: 774 RNCLNMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNIN 811



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 34/183 (18%)

Query: 569  DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILS---------------- 612
            DC ML+  P    NLE L ++GT I ++P S+     +K L +S                
Sbjct: 918  DCSMLKSFPQISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMSYFENLKEFPHALERIT 977

Query: 613  ----NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
                 ++ ++ +P  ++ +S+L   F+S C +L  LP +  +   + A +C SLE L   
Sbjct: 978  SLSLTDTEIQEVPPLVKQISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLEILECS 1037

Query: 669  LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ 728
             S    +  +   N  KL+  E  +++     +H++            PG ++P +F H+
Sbjct: 1038 FS--DQIRRLTFANCFKLN-QEARDLIIQASSEHAV-----------LPGGQVPPYFTHR 1083

Query: 729  SMG 731
            + G
Sbjct: 1084 ATG 1086


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 253/773 (32%), Positives = 387/773 (50%), Gaps = 93/773 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++ VFLSFRGED R    SH+        I  FID+++ RG +I   LL  I  S IAII
Sbjct: 39  LHPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAII 98

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y SS+W                      FY VDPS VRKQ   FG+ F +     
Sbjct: 99  LLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGR 158

Query: 100 PEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           PE+M +RWK ALT AA++ G DS     E+ +I +I+ DV   L  T        VG+E 
Sbjct: 159 PEEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEA 218

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
              EI SLL +  E V  + IWG  GI K TI+  ++NK+   F+      N++      
Sbjct: 219 HTTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRP 278

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQK+LLS++   KD  + ++     RL  KKV +V DDV           
Sbjct: 279 CHDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAK 338

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+ T+D ++LK       Y++      +A ++FC +AFG         +
Sbjct: 339 DVQWFGLGSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQ 398

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +       A  +PL L+V+G YL   SK+ W  ++ +L      +IE VLK SY+SL + 
Sbjct: 399 IARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQ 458

Query: 375 QKNVFLDIACFLEGEHRDEVISIF--------------DASKSLINLDLFYRIRMHDLLR 420
           +K++FL I CF   E R E + +F               A KSL++L+L   I MH+LL 
Sbjct: 459 EKDLFLHITCFFRRE-RIETLEVFLAKKSVDMRQGLQILADKSLLSLNL-GNIEMHNLLV 516

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV-NREIHMNSY 479
            +G +IVRK+SI+ PGKR  L   +DI +VL  +TGT  + GI L+++ V    I+++  
Sbjct: 517 QLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISER 576

Query: 480 AFSKMPKLRFLRF---YGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKL 532
           AF +M  L+FLRF   YGD+   ++   +G+     ++R L W + PL  L      E L
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFL 636

Query: 533 VSLKMPCTKVEQLWD------DVQRLPSSLCT-------FKTPITFE---IIDCKMLERL 576
           V + M  + +E+LWD      +++ +  S C        F T    +   +I+C  L  L
Sbjct: 637 VKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVEL 696

Query: 577 PDELEN----LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           P  + N    LE   +  +++ +LP S+G L+ +K+L L+  S+L ++P S  +++ L  
Sbjct: 697 PSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKE 756

Query: 633 LFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L +S C  L  +P       NL  + A  C+SL +LP+ + + +++  ++L N
Sbjct: 757 LNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLN 809



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 43/228 (18%)

Query: 553  PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRL 609
            PSS+          +  C  L +LP    + NL+ L +   +++ ELP ++   + +  L
Sbjct: 817  PSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTL 876

Query: 610  ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLP 666
             L   SNL  +P SI +++ L  L+++ C  L+ LP L     NL  LS   C+SL +LP
Sbjct: 877  YLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELP 936

Query: 667  AGLSSMSSVLYVNLCNF-----------------LKLDPNELSEIVK--DGWMKH----- 702
            + +  +S++ Y+++ N                  L LD  +   +V+  D + ++     
Sbjct: 937  SSIWRISNLSYLDVSNCSSLLELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVL 996

Query: 703  -------------SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
                          L  +    ++   PG ++P +F +++ G S T+K
Sbjct: 997  NFANCFKLNQEARDLIIQTSACRNAILPGEKVPAYFTYRATGDSLTVK 1044



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 9/145 (6%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKG-TTIRELPESLGRLSWV 606
           +LPSS     +     +  C  L  +P  + N   L+ +   G +++ +LP S+G  + +
Sbjct: 743 KLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNL 802

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLEK 664
           K L L N S+L   P S+ +L++L  L +S C  L  LP +    NL  L   +C+SL +
Sbjct: 803 KELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLME 862

Query: 665 LPAGLSSMSSV--LYVNLC-NFLKL 686
           LP  + + +++  LY++ C N L+L
Sbjct: 863 LPFTIENATNLDTLYLDGCSNLLEL 887


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 252/781 (32%), Positives = 391/781 (50%), Gaps = 99/781 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R +F SH+H       I  FID+++ RG +I   L+  I  S IAII+
Sbjct: 63  HHVFPSFRGEDVRRDFLSHIHMEFQRMGITPFIDNEIERGQSIGPELIRAIRESKIAIIL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS W                      FY+VDPS V+K +  FG+ F +    + 
Sbjct: 123 LSRNYASSSWCLDELAEIMKCREELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E + RW+ AL   A ++G+ S     E+ +I  IA D+  +L+ +  S +  GLVG+  
Sbjct: 183 KEHVGRWRQALANVATIAGYHSTNWDNEATMIRNIATDISNKLNNSASSSDFDGLVGMTA 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++++E LLC+ S+ V  + IWG  GI K TIA  V+NK+S  F+ S F  ++ EA+ T 
Sbjct: 243 HLKKMEPLLCLDSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMESI-EAKYTR 301

Query: 219 GIKD-------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS-------- 261
              D       LQ++ +S+++    M+  ++    +RL  KKV +V D V          
Sbjct: 302 PCSDDYSAKLQLQQQFMSQITNQSGMKISHLGVVQDRLKDKKVLVVLDGVDKSMQLDAMA 361

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS++IIT +D+++ +    N  Y++      +A ++ C +AFG         
Sbjct: 362 KETWWFGPGSQIIITAQDRKIFREHGINHIYKVGFPSTDEALQILCTYAFGQKSPKHGFE 421

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL  +    A  +PL L+V+G Y  G SK  W  A+ +L      +I  +LK SYD+LDD
Sbjct: 422 ELAWEVTHLAGELPLGLRVMGSYFRGMSKLEWTKALPRLRSSLDADILSILKFSYDALDD 481

Query: 374 SQKNVFLDIACFLE----GEHRDEVISIF---------DASKSLINLDLFYRIRMHDLLR 420
             K +FL IACF      G   + +   F          A KSLI+++    I MHDLL 
Sbjct: 482 EDKYLFLHIACFFNYKRIGRVEEYLAETFLDVSHRLNGLAEKSLISMNDGV-IIMHDLLV 540

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDM--NKVNREIHMN 477
            +G +IVRK+S+  PG+R  L   ++I +VL  +  G+ ++ GI+ +   N++  ++H++
Sbjct: 541 KLGIDIVRKQSLREPGQRLFLVDAREICEVLNLDANGSRSVIGINYNFGGNRIKEKLHLS 600

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSL 535
             AF  M  L+FLR  G+ N   + H       ++R L+W   P+  L      + LV L
Sbjct: 601 ERAFQGMSNLQFLRVKGNNNTIHLPHGLEYISRKLRLLDWTYFPMTCLPPIFNTDFLVEL 660

Query: 536 KMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLPDE 579
            M C+K+E+LW+ ++ LP+                 L T     T  +  C  L  LP  
Sbjct: 661 DMRCSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTATNLRTLNLRYCSSLMNLPSS 720

Query: 580 L---ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
           +    NLE L + G +++ ELP S+G L  +K L LS+ S L  +P SI +L  L  L +
Sbjct: 721 IGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNLINLKVLNL 780

Query: 636 SHCERLQTLPELP------CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLD 687
           S    L  L ELP       NL +L+ R C++L KLP  + ++  +  +NL  C+ L++ 
Sbjct: 781 SS---LSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQTLNLRGCSKLEVL 837

Query: 688 P 688
           P
Sbjct: 838 P 838



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 62/292 (21%)

Query: 530  EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL +L +  C+K+E L  +++          +  + ++ DC +L+R P+   N+ ++ +
Sbjct: 821  QKLQTLNLRGCSKLEVLPANIK--------LGSLWSLDLTDCILLKRFPEISTNVGFIWL 872

Query: 589  KGTTIRELPESLGRLSWVKRLILS--------------------NNSNLERIPESIRHLS 628
             GTTI E+P S+   S    + +S                     N+ ++ +P  +   S
Sbjct: 873  IGTTIEEVPSSIKSWSRPNEVHMSYSENLKNFPHAFDIITRLQVTNTEIQEVPPWVNKFS 932

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            +LT L +  C++L +LP++P ++  + A +C SLE+L     + +  +++      KL+ 
Sbjct: 933  RLTVLKLKGCKKLVSLPQIPDSISDIDAEDCESLERLDCSFHNPN--IWLKFAKCFKLNQ 990

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQS-MGSSATLK-TRPPRPAGY 746
                 I+           +    KS   PG E+P +F HQS  G S T+K    P P   
Sbjct: 991  EARDLII-----------QTPTSKSAVLPGREVPAYFTHQSTTGGSLTIKLNEKPLPTS- 1038

Query: 747  NKLISFAFCAVVVFPAFLKYFRHKS-GEDDW-DGNVYAVCCDWKRKSEGHLY 796
               + F  C ++V         HK   E++W D N   V C   +KS  HLY
Sbjct: 1039 ---MRFKACILLV---------HKGDNEENWMDKNDCYVFC---KKSRQHLY 1075


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1212

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 258/767 (33%), Positives = 397/767 (51%), Gaps = 100/767 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG DTR+NFT HL   L L+ I +FIDD+L RGDN++ +L   IE S IAIII
Sbjct: 11  FDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLHRGDNLT-ALFDRIEKSKIAIII 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YA+S W                      FY+V+ S V+ Q  +F           P
Sbjct: 70  FSTNYANSAWCLRELVKILECRNRNQQLVVPIFYKVEKSDVKIQELTFP-------GVSP 122

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++  WK AL  A+++ G+    I   E+ L++EIA D  K+L+    S N+GLVG+E  
Sbjct: 123 EEISSWKAALVSASNILGYVVKEISTSEANLVDEIAVDTFKKLNDLAPSGNEGLVGIESR 182

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           ++ +E LL     + V  + I G+ GI K T+A  ++ ++   F+GS F  N+RE     
Sbjct: 183 LKNLEKLLSWEDLDSVHIIGIVGMVGIGKTTLADCLYGRMRGRFDGSCFLTNIRENSGRS 242

Query: 219 GIKDLQKKLLSELSKDGNMR-----NIESQLNR-LARKKVRIVFDDVT------------ 260
           G++ L +KL S +  D ++      N   +  R L  K++ IV DDV             
Sbjct: 243 GLEYLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHC 302

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+IITTRD ++++     +KY + +L   +A KLF   AF           LT
Sbjct: 303 KWYQGGSRIIITTRDCKLIETI-KGRKYVLPKLNDREALKLFSLNAFNDSCPSKEFEGLT 361

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +  + YA+G PLALKVLG  LC R    WE+ + +L+   H +I EVL+ SY+ L   QK
Sbjct: 362 NMVLDYAKGHPLALKVLGSDLCERDNLYWEAKLDRLKCRSHGDIYEVLETSYEELTIEQK 421

Query: 377 NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
           NVFLDIACF   E+ D V S+ ++              K LI L    RI MHD+L+ MG
Sbjct: 422 NVFLDIACFFRSENVDYVTSLLNSHGVDVSSVIKDLVDKCLITLS-DNRIEMHDMLQTMG 480

Query: 424 REI-VRKESI------------NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
           +EI ++ E+I            N      RLW  +DI  +L K  GT+ I GI LD +K+
Sbjct: 481 KEISLKAETIGIRDFTWLSRHGNQCQWHIRLWDSEDICDILTKGQGTDKIRGIFLDTSKL 540

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGD--KNKCMVS---HL-EGVPFA--EVRHLEWPQCPL 522
            R + +++ A   M  L++L+ Y       C V    HL +G+ +   E+ +L W   PL
Sbjct: 541 -RAMRLSAKALKGMYNLKYLKIYDSHCSRGCEVEFKLHLRKGLDYLPNELTYLHWHGYPL 599

Query: 523 KT--LNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL 580
           ++  L+   + LV LK+P +++ ++WDD ++    L       +  +  C  L       
Sbjct: 600 QSIPLDFDPKNLVDLKLPHSQLAEIWDD-EKDAGMLKWVDLSHSLNLHQCLGLA----NA 654

Query: 581 ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           +NLE L ++G T++++LP ++  L  +  L L + ++L  +P+ ++  S L  L +S C 
Sbjct: 655 QNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKGLKTQS-LQTLILSGCS 713

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
           RL+  P +  N+ +L   + T+++ LP  + ++  +  +NL N  KL
Sbjct: 714 RLKKFPLISENVEVL-LLDGTAIKSLPESIETLRRLALLNLKNCKKL 759



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 132/313 (42%), Gaps = 53/313 (16%)

Query: 592  TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            ++ +LP+++G LS ++ L LS N N+E +PES   L  L +  +  C+ L++LP LP NL
Sbjct: 855  SLYKLPDNIGGLSSLQSLCLSGN-NIENLPESFNQLHNLKWFDLKFCKMLKSLPVLPQNL 913

Query: 652  GLLSARNCTSLEKLPAGLSSMS------SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLY 705
              L A  C SLE L   L+ ++      S+   + C  L  D   L   V    +K  L 
Sbjct: 914  QYLDAHECESLETLENPLTPLTVGERIHSMFIFSNCYKLNQDAQSL---VGHARIKSQLM 970

Query: 706  EERGIKK-----------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAF 754
                +K+            + +   +IP WF HQ +G S  +    P P  +     F  
Sbjct: 971  ANASVKRYYRGFIPEPLVGICYAATDIPSWFCHQRLGRSLEI----PLPPHWCD-TDFVG 1025

Query: 755  CAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH-------LYSWF--LGKISY 805
             A+ V  +F+ Y       +D        CC      +G        L  W    G +S+
Sbjct: 1026 LALSVVVSFMDY-------EDSAKRFSVKCCGKFENQDGSFTRFDFTLAGWNEPCGSLSH 1078

Query: 806  ----VESDHVFLGCNS------FGGEYFGPNYDEFSFRIHCS-FHFPPYLERGEVKKCGI 854
                + SDHVF+G NS        GE     Y + SF  + +       +E  EV KCG+
Sbjct: 1079 EPRKLASDHVFMGYNSCFHVKNLHGESKNCCYTKASFEFYVTDDETRKKIETCEVIKCGM 1138

Query: 855  HFVYAQDSADHIL 867
              VY  +  D +L
Sbjct: 1139 SLVYVPEDDDCML 1151


>gi|357513733|ref|XP_003627155.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521177|gb|AET01631.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1223

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 259/771 (33%), Positives = 389/771 (50%), Gaps = 128/771 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR NFT+ LH  LS +SI+++ID  L++GD +  +L   I+ S +++++
Sbjct: 8   YDVFISFRGEDTRTNFTAQLHQALSDRSIESYIDYNLVKGDEVGPALTKAIDDSHMSLVV 67

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA+S+W                      FY +DPSHVR Q  S+   F+R  +   
Sbjct: 68  FSKDYATSKWCLDELVHILQCRKLNGHVVIPVFYNIDPSHVRHQKESYQMAFARFERELA 127

Query: 101 ------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 +K+  WK AL  AA++SG+DS   R ++++I  I  DVL++L   + ++ K +V
Sbjct: 128 HSKSHVDKVSEWKAALNLAANISGWDSRKYRDDTQVIGNIVEDVLQKLALMYPNELKDIV 187

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            V+ + E IE LL    + + ++ IWG+ GI K TIA  +F+K   H++   F   + E 
Sbjct: 188 KVDENSEHIELLL----KTIPRIGIWGMSGIGKTTIAKQMFSKNFAHYDNVCFLEKISED 243

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQ---------LNRLARKKVRIVFDDVTS---- 261
            E  G   +  +LL EL K    R I +            RL RKKV IV DDV +    
Sbjct: 244 SEKFGPIYVCNQLLRELLK----REITASDVHGLHTFITRRLFRKKVFIVLDDVNNTTQL 299

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                        SR+IITTRD+  L     ++ Y +K     D+ KLF   AF  DH  
Sbjct: 300 DDLCRVLGDLGPNSRLIITTRDRHTL-GGKVDEIYEVKTWKLRDSLKLFSLRAFKQDHPL 358

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAM----RKLEIIPHVEIEEVLK 365
             +  ++++A++ A GVPLAL+VLG +   R +E WES +     K E  P  +I++VL+
Sbjct: 359 KGYERVSERAVECAGGVPLALEVLGSHFHSRKQEFWESELNLYENKGEAFP--DIQKVLR 416

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYR 412
            SY+ L   QK +FLDIA F +GE++D V  I DA              K+LI +    R
Sbjct: 417 TSYNGLSWRQKEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNDR 476

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           I+MHDLL+ M  +IVR+E  N  GKR+RL   KDI  VL  N G++AIEGI  D+++   
Sbjct: 477 IQMHDLLQKMAFDIVREE-YNDRGKRSRLRDAKDICDVLGNNKGSDAIEGIIFDLSQ-KV 534

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
           +IH+ + AF  M KLRFL+F+  K K  +      PF                   AE+L
Sbjct: 535 DIHVQADAFKLMHKLRFLKFHIPKGKKKLE-----PFH------------------AEQL 571

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPDELENLEYLTVK 589
           + + +P + +E LW  +Q L          +  E ID   CK L  LPD    L+   ++
Sbjct: 572 IQICLPHSNIEHLWYGMQEL----------VNLEAIDLSECKQLRHLPDLSGALKLKQLR 621

Query: 590 GTTIREL----PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +   EL    P +  +   +  L+L     LE +    +HL+ L +  +  C+ L+   
Sbjct: 622 LSGCEELCELRPSAFSK-DTLHTLLLDRCIKLESLMGE-KHLTSLKYFSVKGCKNLKEFS 679

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
               ++  L     T +E L   +  M+++  +NL   N   L P ELS +
Sbjct: 680 LSSDSIKGLDLSK-TGIEILHPSIGDMNNLRLLNLEDLNLTNL-PIELSHL 728


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 253/773 (32%), Positives = 387/773 (50%), Gaps = 93/773 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++ VFLSFRGED R    SH+        I  FID+++ RG +I   LL  I  S IAII
Sbjct: 39  LHPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAII 98

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y SS+W                      FY VDPS VRKQ   FG+ F +     
Sbjct: 99  LLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGR 158

Query: 100 PEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           PE+M +RWK ALT AA++ G DS     E+ +I +I+ DV   L  T        VG+E 
Sbjct: 159 PEEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEA 218

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
              EI SLL +  E V  + IWG  GI K TI+  ++NK+   F+      N++      
Sbjct: 219 HTTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRP 278

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQK+LLS++   KD  + ++     RL  KKV +V DDV           
Sbjct: 279 CHDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAK 338

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+ T+D ++LK       Y++      +A ++FC +AFG         +
Sbjct: 339 DVQWFGLGSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQ 398

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +       A  +PL L+V+G YL   SK+ W  ++ +L      +IE VLK SY+SL + 
Sbjct: 399 IARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQ 458

Query: 375 QKNVFLDIACFLEGEHRDEVISIF--------------DASKSLINLDLFYRIRMHDLLR 420
           +K++FL I CF   E R E + +F               A KSL++L+L   I MH+LL 
Sbjct: 459 EKDLFLHITCFFRRE-RIETLEVFLAKKSVDVRQGLQILADKSLLSLNL-GNIEMHNLLV 516

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV-NREIHMNSY 479
            +G +IVRK+SI+ PGKR  L   +DI +VL  +TGT  + GI L+++ V    I+++  
Sbjct: 517 QLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISER 576

Query: 480 AFSKMPKLRFLRF---YGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKL 532
           AF +M  L+FLRF   YGD+   ++   +G+     ++R L W + PL  L      E L
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFL 636

Query: 533 VSLKMPCTKVEQLWD------DVQRLPSSLCT-------FKTPITFE---IIDCKMLERL 576
           V + M  + +E+LWD      +++ +  S C        F T    +   +I+C  L  L
Sbjct: 637 VKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVEL 696

Query: 577 PDELEN----LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           P  + N    LE   +  +++ +LP S+G L+ +K+L L+  S+L ++P S  +++ L  
Sbjct: 697 PSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKE 756

Query: 633 LFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L +S C  L  +P       NL  + A  C+SL +LP+ + + +++  ++L N
Sbjct: 757 LNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLN 809



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 43/228 (18%)

Query: 553  PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRL 609
            PSS+          +  C  L +LP    + NL+ L +   +++ ELP ++   + +  L
Sbjct: 817  PSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTL 876

Query: 610  ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEKLP 666
             L   SNL  +P SI +++ L  L+++ C  L+ LP L     NL  LS   C+SL +LP
Sbjct: 877  YLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELP 936

Query: 667  AGLSSMSSVLYVNLCNF-----------------LKLDPNELSEIVK--DGWMKH----- 702
            + +  +S++ Y+++ N                  L LD  +   +V+  D + ++     
Sbjct: 937  SSIWRISNLSYLDVSNCSSLLELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVL 996

Query: 703  -------------SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
                          L  +    ++   PG ++P +F +++ G S T+K
Sbjct: 997  NFANCFKLNQEARDLIIQTSACRNAILPGEKVPAYFTYRATGDSLTVK 1044



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 9/145 (6%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKG-TTIRELPESLGRLSWV 606
           +LPSS     +     +  C  L  +P  + N   L+ +   G +++ +LP S+G  + +
Sbjct: 743 KLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNL 802

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLEK 664
           K L L N S+L   P S+ +L++L  L +S C  L  LP +    NL  L   +C+SL +
Sbjct: 803 KELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLME 862

Query: 665 LPAGLSSMSSV--LYVNLC-NFLKL 686
           LP  + + +++  LY++ C N L+L
Sbjct: 863 LPFTIENATNLDTLYLDGCSNLLEL 887


>gi|357478623|ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355510652|gb|AES91794.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1350

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 251/771 (32%), Positives = 384/771 (49%), Gaps = 71/771 (9%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRGED+R  F SHL+  L    I  F DD  I RGD IS SLL  I  S I I
Sbjct: 213 MYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDEIQRGDQISISLLRAIGHSRIFI 272

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ S  YA+SRW                      FY VDPS VR++   FG+ F +L   
Sbjct: 273 VVLSTNYANSRWCMLELEKIMEIGRTGGLVVVPVFYEVDPSEVRRREGQFGKAFEKLIPT 332

Query: 99  FP--EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               E  K  WK  L +   ++GF     R ES  I+ I   V + LD T     +  VG
Sbjct: 333 ISVDESTKSNWKRELFDIGSIAGFVLIDSRNESADIKNIVKHVTRLLDRTELFVAEHPVG 392

Query: 156 VECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           VE  ++ +  LL I  SE V  L IWG+GG+ K TIA A++N+I R F+G  F LN+RE 
Sbjct: 393 VESRVDAVTKLLNIQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKFDGRSFLLNIREF 452

Query: 215 EETGGIK-DLQKKLLSELSKDG--NMRNIESQLN----RLARKKVRIVFDDVTS------ 261
            ET      LQ+++L ++ K     +R+IES  N    RLA+ +V +V DDV        
Sbjct: 453 CETDANHVSLQQQILCDVYKTTAFKIRDIESGKNILKERLAQNRVLLVLDDVNELDQLKA 512

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTRD  +L++   +  Y ++E+  +++ +LF   AF        
Sbjct: 513 LCGSREWFGPGSRIIITTRDMHLLRSSRVDLVYTIEEMDESESLELFSWHAFKQPSPAEG 572

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
               +   I Y+  +PLAL+VLGCYL       W+  + KL+ IPH E+++ L + ++ +
Sbjct: 573 FATHSTDVIAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIPHDEVQKNLFLDWNGI 632

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKES 431
              Q  +      F      D  I +    +SL+ +D   ++RMHDLLRDMGR+I+ +ES
Sbjct: 633 KMMQIKILNGCGFF-----ADIGIKVL-VERSLVTVDNRNKLRMHDLLRDMGRQIIYEES 686

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
              P  R+RLW  +++Y VL K  GTEA++G++L   + N+ + +N+ AF KM KLR L+
Sbjct: 687 PFDPENRSRLWRREEVYDVLLKQKGTEAVKGLALVFPRKNK-VCLNTKAFKKMNKLRLLQ 745

Query: 492 FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL--KTLNICAEKLVSLKMPCTKVEQLWDDV 549
             G +      +L G    E+R L W   PL           L+ +++  + ++Q+W + 
Sbjct: 746 LSGVQLNGDFKYLSG----ELRWLYWHGFPLTYTPAEFQQGSLIVIQLKYSNLKQIWKEG 801

Query: 550 QRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLSWVKR 608
           Q L  +L       + ++ +      +P    NLE L +K   ++  +  S+G L  +  
Sbjct: 802 QML-KNLKILNLSHSLDLTETPDFSYMP----NLEKLVLKDCPSLSTVSHSIGSLHKLLL 856

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLP 666
           + L++   L ++P SI  L  L  L +S C  +  L E    +  L+    + T++ K+P
Sbjct: 857 INLTDCIRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVP 916

Query: 667 AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
             +    ++ Y++LC F     +    +++  WM  S  E   ++ S   P
Sbjct: 917 FSIVRSKNIGYISLCGFEGFSRDVFPSLIR-SWMSPSYNEISLVQTSASMP 966



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 16/152 (10%)

Query: 298 FCQW-AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE--I 354
           F  W AF          EL+ + + Y++G+PLALK LG +L G+    W+  ++ LE   
Sbjct: 55  FFNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHGKDALEWKRVLKSLERFS 114

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS------------- 401
            P  E+ + L+ S+D L D +K++FLDIACF  G  ++ V+   + S             
Sbjct: 115 FPDQEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLRTINRSTQCTSLQISLLED 174

Query: 402 KSLINLDLFYRIRMHDLLRDMGREIVRKESIN 433
           KSL+ +    ++ MH LL+ M R+I+++ES N
Sbjct: 175 KSLLTIGENNKLEMHGLLQAMARDIIKRESSN 206


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 266/800 (33%), Positives = 406/800 (50%), Gaps = 126/800 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRG+DTR+NFTSHL++ L+ + I  ++DD +L RG  I  +L    E S  ++
Sbjct: 21  MYDVFLSFRGKDTRNNFTSHLYYNLAQRGIDVYMDDRELERGKTIEPALWKPFEESRFSV 80

Query: 60  IIFSERYASSRWF-----------------------------FYRVDPSHV----RKQSH 86
           IIFS  YASS W                              FY VDPS V    RK   
Sbjct: 81  IIFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEFYDVDPSEVIERKRKYEE 140

Query: 87  SFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATF 146
           +F  H    ++   EK++ WK+ L+  A+LSG+D    R ES+ I+ I   +  +L  T 
Sbjct: 141 AFVEHEQNFKENL-EKVRNWKDCLSTVANLSGWDVRN-RNESESIKIIVEYISYKLSITL 198

Query: 147 QSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSY 206
            + +K LVG++  +E +   +         + I+G+GGI K T+A  V+++    FEGS 
Sbjct: 199 PTISKNLVGIDSRLEVLNGYIGEEVGEAIFIGIYGMGGIGKTTVARVVYDRFRLQFEGSC 258

Query: 207 FALNVRE--AEETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDV 259
           F  NVRE  AE+ G  + LQ++LLSE+  +      + R IE    RL  KK+ ++ DDV
Sbjct: 259 FLANVREVFAEKDGPCR-LQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDV 317

Query: 260 TS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF 303
                             GSR+IIT+RDKQVL      + Y  ++L   DA  LF Q AF
Sbjct: 318 DDKEQLEFLAEERGWFGPGSRIIITSRDKQVLTRNGVARIYEGEKLNDDDALMLFSQKAF 377

Query: 304 GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEV 363
             D      ++L+ + + YA G+PLAL+V+G +L GRS   W  A+ ++  IP  EI +V
Sbjct: 378 KNDQPAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDREIIKV 437

Query: 364 LKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLF 410
           L +S+D L + +K +FLDIACFL+G   D +  I D               +SLI++   
Sbjct: 438 LLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSR- 496

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
            ++ MH+LL+ MG+EI+R+ES   PG+R+RLW +KD+   L  NTG E +E I LDM  +
Sbjct: 497 DQVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNTGKEKVEAIFLDMPGI 556

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
            +E   N  AFSKM +LR L+     N  +    E +    +R LEW   P K+L   + 
Sbjct: 557 -KEARWNMKAFSKMSRLRLLKI---DNVQLFEGPEDLS-NNLRFLEWHSYPSKSLPAGLQ 611

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENL 583
            ++LV L M  + +EQLW             K+ +  +II+      L + PD   + NL
Sbjct: 612 VDELVELHMANSNLEQLWYGC----------KSAVNLKIINLSNSLNLSQTPDLTGIPNL 661

Query: 584 EYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           + L ++G T++ E+  SL     ++ + L N  ++  +P ++  +  L    +  C +L+
Sbjct: 662 KSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNL-EMESLEVCTLDGCSKLE 720

Query: 643 TLPELPCN--------------------------LGLLSARNCTSLEKLPAGLSSMSSVL 676
             P++  N                          LGLLS  NC +L+ +P+ +  + S+ 
Sbjct: 721 KFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLK 780

Query: 677 YVNL--CNFLKLDPNELSEI 694
            ++L  C+ LK  P  L ++
Sbjct: 781 KLDLSGCSELKYIPENLGKV 800



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIRE--LPESLGRLS 604
            +++LP+S+   K      +  CK +  LP    L +LE L ++   +RE  LPE +G LS
Sbjct: 813  IRQLPASVFLLKKLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRSCNLREGALPEDIGWLS 872

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L LS N N   +P+SI  LS+L  L +  C  L++LPE+P  +  +    C SL+ 
Sbjct: 873  SLRSLDLSQN-NFVSLPKSINRLSELEMLVLEDCTMLESLPEVPSKVQTVYLNGCISLKT 931

Query: 665  LPAGL----SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE 720
            +P  +    S  S  + +N       +  E   +         L   R  +  +  PGNE
Sbjct: 932  IPDPIKLSSSKRSEFICLNCWELYNHNGQESMGLFMLERYLQGLSNPR-TRFGIAVPGNE 990

Query: 721  IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
            IP WF HQS GSS  ++  P    G+   ++F+
Sbjct: 991  IPGWFNHQSKGSSIRVEV-PSWSMGFVACVAFS 1022


>gi|357513945|ref|XP_003627261.1| Resistance protein [Medicago truncatula]
 gi|355521283|gb|AET01737.1| Resistance protein [Medicago truncatula]
          Length = 961

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 251/773 (32%), Positives = 380/773 (49%), Gaps = 123/773 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++DVFL+FRGEDTR +  SH+   L+   I T+ID QL +G  +   LL  IE S I+I+
Sbjct: 12  IHDVFLNFRGEDTRTSLVSHMDAALTNAGINTYIDQQLHKGTELGPELLRAIEGSHISIL 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+RY  S W                      FY VDPS VR+Q  +FG     +    
Sbjct: 72  VFSKRYTESSWCLNELKKVMECHRTHGQVVVPIFYDVDPSVVRQQKGAFGEILKYM---- 127

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
              + RW +ALT+AA+LSG+D    R E++L+++I  D+L +LD    S  +  VG+E  
Sbjct: 128 ---LSRWTSALTQAANLSGWDVTNCRSEAELVQQIVEDLLAKLDNASLSIIEFPVGLESR 184

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EET 217
           + ++   +      VC + IWG+G   K T A A++N+I R F    F  NVRE   +E 
Sbjct: 185 MHKVIEFIATQPSKVCMIGIWGMGRSGKTTTAKAIYNQIHRKFLNRSFIENVREVCEKEN 244

Query: 218 GGIKDLQKKLLSELSKDGN--------MRNIESQLNRLARKKVRIVFDDVTS-------- 261
            G   LQ++LLS++    N           IE    R   KK+ +V DDVT+        
Sbjct: 245 RGTIHLQQQLLSDILNTKNKIHSPALGTTKIE---KRFQGKKLLVVLDDVTTVEQLKALC 301

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS  I+TTRD ++L     +    MKE+   D  +LF   AF       +  
Sbjct: 302 GNPRLFGPGSVFIVTTRDARLLNLVKVDYVCTMKEMEEKDPLELFSWHAFRQPSPIKNFS 361

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-D 372
           EL+   + Y  G+PLAL+V+G YL GR+K+ WES + KLE IP+ +++E L+ISYD L D
Sbjct: 362 ELSRTVVAYCGGLPLALEVIGSYLYGRTKQEWESVLLKLERIPNDQVQEKLRISYDGLKD 421

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D  K++FLDI CF  G+ R  V  I +               +SL+ ++   ++ MHDLL
Sbjct: 422 DMAKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGITVLVERSLVKIEKNNKLGMHDLL 481

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           RDMGREIVR+ S  +PGKR+RLW H+D++ VL KNT               +  + M   
Sbjct: 482 RDMGREIVRQSSAKNPGKRSRLWFHEDVHDVLTKNTVFRFC---------TDSFMEMKQL 532

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICA-----EKLVS 534
              K+ +L  +   GD   C+            + L W      TLN        E LV+
Sbjct: 533 KQLKLLQLDCVDLAGDYG-CI-----------SKQLRWVSVQGFTLNCIPDDFYQENLVA 580

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT- 591
           L +  +K++Q+W++   L       K  I   +   + L+  PD  +L NLE L +K   
Sbjct: 581 LDLKHSKIKQVWNETMFLE------KLKI-LNLSHSRYLKHTPDFSKLPNLEKLIMKDCP 633

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ E+ +S+G L  V  + L + ++L  +P +I  L +     I   + L TL       
Sbjct: 634 SLSEVHQSIGDLKNVLLINLKDCTSLSNLPRNIYQLEE----DIMQMKSLTTL------- 682

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
                 N T+++++P  L    S+ Y++LC +  L  +    ++   WM  +L
Sbjct: 683 ----IANDTAVKEVPCLLVRSKSIGYLSLCRYEGLSCDVFPSLIW-SWMSPTL 730


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 264/803 (32%), Positives = 400/803 (49%), Gaps = 130/803 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF+GEDTR NFT HL+  L    I+TF D++ L +G +I+  L   IE S I II
Sbjct: 20  YDVFLSFKGEDTRRNFTDHLYTALVACGIQTFRDNEELEKGGDIASDLSRAIEESRIFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFG----RHFSRL 95
           IFS+ YA S W                      FY VDPS VR+Q  +FG     H    
Sbjct: 80  IFSKNYAYSTWCLNELVKIVECMKQKDIMVLPIFYHVDPSDVRRQRGNFGDALAHHEGDA 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            ++  + +++W+ ALT+AADLSG   +  + E++ + EI N ++  L+    +  K +VG
Sbjct: 140 DQQKKQMVQKWRIALTKAADLSGCHVDD-QYETEAVNEIINKIVGSLNCQPLNVGKNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E ++S++      V  + I G GGI K TIA A++N+IS  ++GS F  N+RE  
Sbjct: 199 ISVHLENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRERS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVF---DDVTS----- 261
           + G I  LQK+LL  + K    R  N++  +N + R    K+V ++F   DD+T      
Sbjct: 259 K-GDILQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLA 317

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    S +IIT+RDKQVL +   +  Y + +    +A +LF  WAF  +    ++ 
Sbjct: 318 EEKDWFDVKSTIIITSRDKQVLAHYGVHISYEVSKFNNKEAIELFSLWAFKQNLPKEAYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD
Sbjct: 378 NLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLE-----------GEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDM 422
             K +FLD+ACF +           G H +  I+  +  K LI +     I MHDL++ M
Sbjct: 438 MDKKIFLDVACFFKEKDKYFVSRILGPHAEYGIATLN-DKCLITISK-NMIDMHDLIQQM 495

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREI+R+E     G+R+R+W   D Y VL +N GT AIEG+ LD+ K +  I     +F 
Sbjct: 496 GREIIRQECPEDLGRRSRVW-DSDAYHVLTRNMGTRAIEGLFLDICKFD-PIQFAKESFK 553

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPF----------------AEVRHLEWPQCPLKTL- 525
           +M +LR L+ +      ++S     P+                +++ +L W    L++L 
Sbjct: 554 QMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEFSSKLTYLHWDGYSLESLP 613

Query: 526 -NICAEKLVSLKMPCTKVEQLWD------------------------------------- 547
            N  A+ LV L +  + ++QLW                                      
Sbjct: 614 TNFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSVPNLEILTLE 673

Query: 548 ---DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESL- 600
               ++ LP  +  +K   T     C  L+R P+    +  L  L + GT I+ LP SL 
Sbjct: 674 GCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLF 733

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNC 659
             L  ++ L    +S L +IP  I  LS L  L +SHC  ++  +P   C+L  L   N 
Sbjct: 734 EHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNL 793

Query: 660 TS--LEKLPAGLSSMSSVLYVNL 680
            S     +PA ++ +S +  +NL
Sbjct: 794 KSNDFRSIPATINQLSRLQVLNL 816



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 153/358 (42%), Gaps = 75/358 (20%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVK-------------- 589
            +++  LP S+C   +  T  ++ C  L +LP+ L   ++LEYL VK              
Sbjct: 1202 ENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSG 1261

Query: 590  ----------GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                         +RE+P  +  LS ++ L L  N     IP+ I  L  L    +SHC+
Sbjct: 1262 LCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGN-RFSSIPDGINQLYNLIVFDLSHCQ 1320

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG- 698
             LQ +PELP +L  L A  C+SLE     LSS S++L+ +L    K      S I +   
Sbjct: 1321 MLQHIPELPSSLEYLDAHQCSSLEI----LSSPSTLLWSSLFKCFK------SRIQRQKI 1370

Query: 699  WMKHSLYE-ERGIKKSMYFPG-NEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFC 755
            +   S+ E E   K  M+ PG N IP W  HQ  GS  T+  R PR    N   + FA C
Sbjct: 1371 YTLLSVQEFEVNFKVQMFIPGSNGIPGWISHQKNGSKITM--RLPRYWYENDDFLGFALC 1428

Query: 756  AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDW--KRKSEGHLYS------WFL----GKI 803
            ++ V     +  R    + +++   + +  D+  KR  E  L+       W +     KI
Sbjct: 1429 SLHVPLDIEEENRSFKCKLNFNNRAFLLVDDFWSKRNCERCLHGDESNQVWLIYYPKSKI 1488

Query: 804  SYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                  + +   N+   EYFG                    E  +V++CG HF+YAQ+
Sbjct: 1489 PKKYHSNEYRTLNTSFSEYFGT-------------------EPVKVERCGFHFIYAQE 1527



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 12/143 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRELPESLGRLSW 605
            ++ LPSS+C FK+  T     C  LE  P+ LE++   + L + GT I+E+P S+ RL  
Sbjct: 1133 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 1192

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA------RNC 659
            ++ L L+   NL  +PESI +L+ L  L +  C +L  LPE   NLG L +      ++ 
Sbjct: 1193 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPE---NLGRLQSLEYLYVKDL 1249

Query: 660  TSLEKLPAGLSSMSSVLYVNLCN 682
             S+      LS + S++ + L N
Sbjct: 1250 DSMNCQLPSLSGLCSLITLQLIN 1272



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 29/224 (12%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKM---LERLPDE---LENLEYLTVKGTTIRE--LPESL 600
           ++ LPSSL  F+     EI+  +M   L ++P +   L +LE L +    I E  +P  +
Sbjct: 725 IKVLPSSL--FEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDI 782

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             LS +K L L +N +   IP +I  LS+L  L +SHC+ LQ +PELP +L LL A    
Sbjct: 783 CHLSSLKELNLKSN-DFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSN 841

Query: 661 SLEKLPAGLSSMSSVLYV-NLCNFLKLDPNELSEIVKDG-WMKHSL--YEERGIKKSMYF 716
                    SS +S L V +L N    +  +L+   ++  W ++S+  Y  +GI   +  
Sbjct: 842 P-------TSSRASFLPVHSLVNCFNSEIQDLNCSSRNEVWSENSVSTYGSKGI--CIVL 892

Query: 717 PGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
           PG+  +P+W     M         P      N+ + FA C V V
Sbjct: 893 PGSSGVPEWI----MDDQGIATELPQNWNQNNEFLGFALCCVYV 932



 Score = 45.8 bits (107), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 28/128 (21%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE-------------- 622
            P EL+ L     K  T++ LP S+     +  L  S  S LE  PE              
Sbjct: 1119 PSELDGLCLRDCK--TLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLD 1176

Query: 623  ---------SIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLS 670
                     SI+ L  L +L +++CE L  LPE  CNL     L   +C  L KLP  L 
Sbjct: 1177 GTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLG 1236

Query: 671  SMSSVLYV 678
             + S+ Y+
Sbjct: 1237 RLQSLEYL 1244


>gi|357436335|ref|XP_003588443.1| Disease resistance-like protein [Medicago truncatula]
 gi|355477491|gb|AES58694.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1057

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 276/891 (30%), Positives = 420/891 (47%), Gaps = 169/891 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFL+FRG DTR+ F  HL+  L+ K I TFIDD +L RGD I  SL   IE S I I 
Sbjct: 18  YQVFLNFRGGDTREGFIGHLYKALTDKGIHTFIDDRELQRGDEIKPSLDNAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDP+H+R QS S+G H ++  + F
Sbjct: 78  VFSINYASSSFCLDELVHIIHCYKKKGRLILPVFYGVDPTHIRHQSGSYGEHLTKHEESF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++ +WK ALT+A++LSG+ S+    E K I EI   +  ++           
Sbjct: 138 QNSKKNMERLHQWKLALTQASNLSGYHSSR-GYEYKFIGEIVKYISNKISREPLHVANYP 196

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   +++++ LL  GS+ GV  + I+GIGG+ K T+A A++N I+  FEG  F  +VR
Sbjct: 197 VGLWSQVQQVKLLLDNGSDDGVHMVGIYGIGGLGKSTLARAIYNFIADQFEGLCFLHDVR 256

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E      +K LQ+KLL      E+  D     I     RL RKK+ ++ DDV        
Sbjct: 257 ENSAISNLKHLQEKLLLKTTGLEIKLDHVSEGIPIIKERLCRKKILLILDDVNDIKQLHA 316

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRV++TTRDKQ+L        + ++ L   +A +L    AF  D + + 
Sbjct: 317 LAGGLDWFGYGSRVVVTTRDKQLLTCHGIESTHEVEGLYGTEALELLSWMAFKNDPVPSI 376

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + E+  +A+ YA G+PL L+++G  L G+S E W+  +   + IP+ EI+++LK+SYD L
Sbjct: 377 YNEILIRAVAYASGLPLVLEIVGSNLFGKSIEEWKGTLDGYDKIPNKEIQKILKVSYDGL 436

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHD 417
           ++ +++VFLDIAC  +G   ++   I                A KSLI+   +  + +HD
Sbjct: 437 EEEEQSVFLDIACCFKGYEWEDAKHILHSHYGHCITHHLGVLAEKSLID-QYYSHVTLHD 495

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           ++ DMG+E+VR+ES   PG+R+RLW   DI  VL KNTGT  +E I ++ + +   I   
Sbjct: 496 MIEDMGKEVVRQESPKEPGERSRLWCQDDIVHVLNKNTGTSKVEMIYMNFHSMEPVIDQK 555

Query: 478 SYAFSKMPKLRFL-------------------------------------RFYGDKNKCM 500
             AF KM  L+ L                                     + + D N  +
Sbjct: 556 GKAFKKMTNLKTLVIENGHFSKGLKYLRSSLKVLKWKGFTSESLSSCFSNKKFQDMNVLI 615

Query: 501 VSHLE---------GVPFAEVRHLEWPQCP-LKTLNICAEKLVSLK----MPCTKVEQLW 546
           + H E         G+P   ++ L +  C  L T++     L+ L+    M C K++   
Sbjct: 616 LDHCEYLTHISDVSGLP--NLKKLSFKDCKNLITIHNSVGYLIKLEILDAMGCRKLKSF- 672

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRL 603
                 P  L + K     E+  C  L   P    ++ N+E + +  T+IRELP S   L
Sbjct: 673 -----PPLQLPSLK---EMELSGCWSLNSFPKLLCKMTNIENILLYETSIRELPSSFQNL 724

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL---------QTLPELP---CNL 651
           S + RL L       R P   +H  K+  +  S+ + L         + LP L     N+
Sbjct: 725 SGLSRLSLEGRG--MRFP---KHNGKMYSIVFSNVKALSLVNNNLSDECLPILLKWCVNV 779

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLK--------------LDPNELSEIV 695
             L+    +  + LP  LS    ++ +N+  C +L+               + N LS   
Sbjct: 780 IYLNLMK-SKFKTLPECLSECHHLVKINVSYCKYLEEIRGIPPNLKELFAYECNSLSSSS 838

Query: 696 KDGWMKHSLYEERGIKKSMYFP-GNE-IPKWFRHQSMGSSATLKTRPPRPA 744
           K   +   L+E R     +YFP G E IP WF HQS G++ +   R   P+
Sbjct: 839 KRMLLSQKLHEARCT--YLYFPNGTEGIPDWFEHQSKGNTISFWFRKKIPS 887


>gi|224126759|ref|XP_002329466.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870146|gb|EEF07277.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 208/511 (40%), Positives = 290/511 (56%), Gaps = 59/511 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VFLSFRG++TR+ FT+HL+H L  K I  FIDD+L RG++I+  L   IE S I+++I
Sbjct: 1   YSVFLSFRGQETRNTFTAHLYHALCNKGINAFIDDKLERGEHITSQLNQIIEDSRISLVI 60

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YA S +                      FY VDPS V +Q  SFG           
Sbjct: 61  FSENYARSIYCLDELVKILECKESKGQVVLPVFYNVDPSDVEEQKGSFGESLDFHETYLG 120

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              E++K+W+ ALT+AA LSG+  +    E+  I +I  +V  +L+ T        VG++
Sbjct: 121 INAEQLKQWREALTKAAQLSGWHLDR-GNEAVFIRKIVEEVWAQLNHTSLHVAAYQVGLD 179

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             IEE+  +L IGS  VC + I G+GG  K T+A AV+N I+  FE   F  NVRE  + 
Sbjct: 180 QRIEELIHMLNIGSSNVCMVGICGLGGSGKTTVAKAVYNLINNQFEACCFLSNVREFSKR 239

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS---------- 261
            G+  LQ+KLL E+  D  +      R I    +RL  KKV IV DDV            
Sbjct: 240 YGLVHLQEKLLFEILGDKTLVLGSVDRGINVIKDRLRHKKVLIVIDDVDHLDQLKQIAGE 299

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GS++IITTRD+++L      +  R+KEL   DA  LFC  AF   H    ++E+
Sbjct: 300 RDWFGLGSKIIITTRDERLLVFHGVERLLRVKELCCDDALMLFCWHAFRNSHPPIDYLEI 359

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +D+ +KY++G+PLAL VLG +L GRS    ES + KL  IP+ +I EVLKIS+D L+  +
Sbjct: 360 SDQVVKYSKGLPLALVVLGSFLYGRSIPERESELDKLRRIPNKQIYEVLKISFDGLEHHE 419

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDMG 423
           + +FLDIACF +G+ +D VI I DA         + L+   L Y    +++MHDLL+ MG
Sbjct: 420 RAIFLDIACFFKGQEKDYVIKILDACDFDPVIGIQVLMEKSLVYIENNKLQMHDLLQWMG 479

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           R++V +ES N PG+R+RLW H+DI  VL +N
Sbjct: 480 RQVVHQESPNVPGRRSRLWFHEDILHVLTEN 510


>gi|27466164|gb|AAN86124.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1055

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 238/746 (31%), Positives = 382/746 (51%), Gaps = 80/746 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH + + K I TF D ++ RG  I   L+  I  + ++I++
Sbjct: 13  YQVFSSFHGPDVRKGFLSHLHSLFASKGITTFNDQKIERGQTIGPELIQGIREARVSIVV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY VDPS V+KQS  FG+ F +  + + 
Sbjct: 73  LSKKYASSSWCLDELVEILNCKEALVQIVMTVFYEVDPSDVKKQSGEFGKVFEKTCQGKN 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E  +RW+NAL + A ++G  S     E+ +I++I  DV  +L+ T     +G+VG+E  
Sbjct: 133 EEVEQRWRNALADVAIIAGEHSLNWDNEADMIQKIVTDVSDKLNLTPSRDFEGMVGMEAH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + E++SLL + S+ V  + IWG  GI K TIA A+F+++S  F    F  N++ +    G
Sbjct: 193 LTELKSLLSLESDEVKMIGIWGPAGIGKTTIARALFDRLSSIFPLICFMENLKGS--LTG 250

Query: 220 IKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT----------- 260
           + D      LQ +LLS++    NM+  ++ +   RL  ++V I+ DDV            
Sbjct: 251 VADHDSKLRLQNQLLSKILNQENMKIHHLGAIRERLHDQRVLIILDDVDDLEQLEVLAED 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+I+TT DK++LK       Y +      +A ++ C   F    +     EL
Sbjct: 311 PSWFGSGSRIIVTTEDKKILKAHRIKDIYHVNFPSKKEALEILCLSTFKQSSIPDGFEEL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            +K  +    +PL L+V+G  L G SK+ WE  +  +E     +IE  LK+ Y+ L    
Sbjct: 371 ANKVAELCGNLPLGLRVVGSSLRGESKQEWELQLSSIEASLDGKIETTLKVGYERLSKKN 430

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           +++FL IACF   +  D V ++               A +SL+ +  +  I MH LL+ +
Sbjct: 431 QSLFLHIACFFNNQEVDYVTALLADRNLDVGNGFNILADRSLVRISTYGDIVMHHLLQQL 490

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR+IV ++S + PGKR  +   ++I  VL   TGT +++GIS D +  + E+ +   AF 
Sbjct: 491 GRQIVHEQS-DEPGKREFIIEPEEIRDVLTDETGTGSVKGISFDASN-SEEVSVGKGAFE 548

Query: 483 KMPKLRFLRFYGD--KNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
            MP L+FLR Y +   ++  +   E + +   VR L W   P K+L      E LV + M
Sbjct: 549 GMPNLQFLRIYREYFNSEGTLQIPEDMKYLPPVRLLHWENYPRKSLPQRFHPEHLVKIYM 608

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIR 594
           P +K+++LW  +Q LP+        ++F I     L+ +P+     NLE L +    T+ 
Sbjct: 609 PRSKLKKLWGGIQPLPN---IKSIDLSFSI----RLKEIPNLSNATNLETLNLTHCKTLV 661

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP S+  L  +K+L +S   NL  IP +I +L+ L  L +S C RL+T P++  N+  L
Sbjct: 662 ELPSSISNLHKLKKLKMSGCENLRVIPTNI-NLASLERLDMSGCSRLRTFPDISSNIDTL 720

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNL 680
           +  + T +E +P  +   S ++ +N+
Sbjct: 721 NLGD-TKIEDVPPSVGCWSRLIQLNI 745


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 260/814 (31%), Positives = 402/814 (49%), Gaps = 153/814 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL  + IKTF D++ +  G  I + L   IE S  AI+
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLKDRGIKTFQDEKRLEYGATIPEELCKAIEESQFAIV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 72  VFSENYATSRWCLNELVKIMECKTQFRQTIIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++RW+ AL  AA+L G   N  + ++  I +I + +  +L     S  + +VG+
Sbjct: 132 KDDVEGIQRWRTALNAAANLKGSCDNRDKTDADCIRQIVDQISSKLSKISLSYLQNIVGI 191

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +EEIESLL IG   V  + IWG+GG+ K TIA A+F+ +      S  F+G+ F  +
Sbjct: 192 DTHLEEIESLLGIGINDVRIVGIWGMGGVGKTTIARAMFDTLLGRRDSSYQFDGACFLKD 251

Query: 211 VREAEETGGIKDLQKKLLSELSKDGNMRNIE-----SQLNRLARKKVRIVFDDVT----- 260
           ++E +   G+  LQ  LL EL ++    N E        +RL  KKV IV DD+      
Sbjct: 252 IKENKR--GMHSLQNTLLFELLRENANYNNEDDGKHQMASRLRSKKVLIVLDDIDDKDHY 309

Query: 261 ------------SGSRVIITTRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                       +GSR+I+TTRDK ++ KN   +  Y +  L   +A +LF Q AF  + 
Sbjct: 310 LEYLAGDLDWFGNGSRIIVTTRDKHLIGKN---DIIYEVTALPDHEAIQLFYQHAFKKEV 366

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
            D    EL+ + + +A+G+PLALKV G  L  R   VW+SA+ +++I P+ +I E LKIS
Sbjct: 367 PDECFKELSLEVVNHAKGLPLALKVWGSSLHKRDITVWKSAIEQMKINPNSKIVEKLKIS 426

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           YD L+  Q+ +FLDIACF  G  +D ++ +  +              KSL+ +  + ++ 
Sbjct: 427 YDGLESMQQEMFLDIACFFRGRQKDYIMQVLKSCHFGAEYGLDVLIEKSLVFISEYNQVE 486

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDL++DMG+ IV  +    PG+R+RLW  +D+ +V+  N GT ++E I +     +  +
Sbjct: 487 MHDLIQDMGKYIVNFK--KDPGERSRLWLAEDVEEVMNNNAGTMSVEVIWV---HYDFGL 541

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSH---LEGVPFAEVRHLEWPQCPLKTL--NICA 529
           + ++ A   M +LR L   G  +    SH   +E +P + +R       P ++L      
Sbjct: 542 YFSNDAMKNMKRLRILHIKGYLSS--TSHDGSIEYLP-SNLRWFVLDDYPWESLPSTFDL 598

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLP--------SSLCTFKTP------------------- 562
           + LV L++  + +  LW + + LP        SS    +TP                   
Sbjct: 599 KMLVHLELSRSSLHYLWTETKHLPSLRRIDLSSSRRLRRTPDFTGMPNLEYLNMLYCRNL 658

Query: 563 -------------ITFEIIDCKMLERLP-DELENLEYLT--------------------- 587
                        I   + +CK L+R P   +E+LEYL+                     
Sbjct: 659 EEVHHSLRCCSKLIRLNLNNCKSLKRFPCVNVESLEYLSLEYCSSLEKFPEIHGRMKPEI 718

Query: 588 ---VKGTTIRELPESLGRL-SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
              ++G+ IRELP S+ +  + + +L L     L  +P SI  L  L  L +S C +L++
Sbjct: 719 QIHMQGSGIRELPSSITQYQTHITKLDLRGMEKLVALPSSICRLKSLVSLSVSGCFKLES 778

Query: 644 LPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSV 675
           LPE   +L  L     +CT + + P+ +  +S +
Sbjct: 779 LPEEVGDLENLEELDASCTLISRPPSSIIRLSKL 812



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 72/185 (38%), Gaps = 60/185 (32%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRE------------- 595
           LPSS+C  K+ ++  +  C  LE LP+E   LENLE L    T I               
Sbjct: 755 LPSSICRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSIIRLSKLKI 814

Query: 596 --------------------------------------LPESLGRLSWVKRLILSNNSNL 617
                                                 LPE +G LS +K+L LS N N 
Sbjct: 815 FDFGSSKDRVHFELPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLKKLYLSGN-NF 873

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLEKL---PAGLSSM 672
           E +P SI  L  L  L + +C+RL  LPE     NL  L    C+ LE++   P  L   
Sbjct: 874 EHLPRSIAQLGALRILELRNCKRLTQLPEFTGMLNLEYLDLEGCSYLEEVHHFPGVLQKT 933

Query: 673 SSVLY 677
            SV +
Sbjct: 934 HSVKF 938


>gi|297809025|ref|XP_002872396.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318233|gb|EFH48655.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 918

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 242/742 (32%), Positives = 385/742 (51%), Gaps = 84/742 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R  F +H    L  K I  F D+++ RG +I   L+  I+ S IA+++
Sbjct: 8   YDVFTSFSGEDVRVTFLTHFFKELDRKMIIAFKDNEIERGHSIGPKLIKAIKDSRIAVVV 67

Query: 62  FSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEKM 103
           FS+ Y+SS W                  FY +DPS VRKQ   FG  F +  + R  +++
Sbjct: 68  FSKNYSSSSWCLNELLEIVKCQEIVIPIFYDLDPSDVRKQEGEFGESFKKTCKNRTKDEI 127

Query: 104 KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSIEE 162
           +RW+ ALT  A+++G+ +     E+KLIEEIAN+VL +L     SK+     G+E  I+E
Sbjct: 128 QRWREALTNVANIAGYHTGKPNDEAKLIEEIANNVLDKLMKLTPSKDFDEFFGIEEHIKE 187

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF--------ALNV--R 212
           +  LLC+ S+ V  + IWG  GI K TIA A+FN++ RHF+G  F        ++++  R
Sbjct: 188 LSVLLCLESQEVRMVGIWGATGIGKTTIARALFNRLYRHFQGRVFIDRAFISKSMDIYSR 247

Query: 213 EAEETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT--------- 260
              +   +K  LQ+K LS+L   K+  + ++++   RL   KV +  DD+          
Sbjct: 248 ANPDDYNLKLHLQEKFLSKLLDKKNLEINHLDAVKERLKNMKVLLFIDDLDDQVVLEALA 307

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+I+ T+DK +L+    +  Y +       A K+FC+ AF  +      I
Sbjct: 308 CQTQWFGDGSRIIVITKDKHLLRAYGIDNIYEVLLPSKDLAIKMFCRSAFRQNSPPNGFI 367

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL+ + ++ A  +PL L +LG YL GR+KE+W   M         +IE+ L++SYD LD 
Sbjct: 368 ELSYEVVQRAGSLPLGLNILGSYLRGRNKEIWMEMMPGFRNKLDGKIEKTLRVSYDGLDS 427

Query: 374 -SQKNVFLDIACFLEGEHRDEVISI-----FDASKSLINL--DLFYRIR-------MHDL 418
              + +F  IAC    E   ++  +      + +  LINL      RI+       MH L
Sbjct: 428 KDDQAIFRHIACIFNFETCSDIKKLLADSGLNVTNGLINLVDKSLIRIKPKQKTVEMHCL 487

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++ GREIVR +S++ P KR  L   KDIY VL   +GT+ + GISLD+++++ E+H++ 
Sbjct: 488 LQETGREIVRAQSVDDPRKREFLVDGKDIYDVLDDCSGTKKVLGISLDIDEID-ELHLHV 546

Query: 479 YAFSKMPKLRFLRFYGD------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            AF  M  LRFL+ Y +      ++K ++          +R L W + P++ +      +
Sbjct: 547 DAFKGMRNLRFLKLYTNTKISEKEDKLLLPKEFNYLPNTLRLLSWQRFPMRCMPSEFFPK 606

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L M  +K+E+LW+ V  L       +   T  +   + L+  PD     +LE L++
Sbjct: 607 YLVKLIMTGSKLEKLWEGVMPL-------QCLKTINLFGSQNLKEFPDLSLATSLETLSL 659

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
               ++ E+P ++G L+ +  L +    NLE +P  I +L  L+ L ++ C RL+  P L
Sbjct: 660 GYCLSLVEVPSTIGNLNKLTYLNMLGCHNLETLPADI-NLKSLSHLILNGCSRLKIFPAL 718

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+  L+  N  ++EK P+ L
Sbjct: 719 STNISELTL-NLLAVEKFPSNL 739



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 14/165 (8%)

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL 583
           N+  E LV L +      +LWD V+ L S         T ++ D K L+ +PD     NL
Sbjct: 738 NLHLENLVYLIIQGMTSVKLWDGVKVLTSL-------KTMDLRDSKNLKEIPDLSMASNL 790

Query: 584 EYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
             L ++   ++ ELP ++  L  +  L +S  +NLE  P  + +L  L  + ++ C RL+
Sbjct: 791 LILNLRECLSLVELPSTIRNLHNLAELDMSGCTNLETFPNDV-NLQSLKRINLARCSRLK 849

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLK 685
             P++  N+  L     T++E++P  + + S + Y+ +  C+ L+
Sbjct: 850 IFPDISTNISELDLSQ-TAIEEVPWWIENFSKLEYLLMGKCDMLE 893



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 15/142 (10%)

Query: 558 TFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNS 615
              T I+   ++   +E+ P  L  ENL YL ++G T  +L + +  L+ +K + L ++ 
Sbjct: 717 ALSTNISELTLNLLAVEKFPSNLHLENLVYLIIQGMTSVKLWDGVKVLTSLKTMDLRDSK 776

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLPELPC------NLGLLSARNCTSLEKLPAGL 669
           NL+ IP+    LS  + L I +     +L ELP       NL  L    CT+LE  P  +
Sbjct: 777 NLKEIPD----LSMASNLLILNLRECLSLVELPSTIRNLHNLAELDMSGCTNLETFPNDV 832

Query: 670 SSMSSVLYVNL--CNFLKLDPN 689
            ++ S+  +NL  C+ LK+ P+
Sbjct: 833 -NLQSLKRINLARCSRLKIFPD 853


>gi|357499537|ref|XP_003620057.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495072|gb|AES76275.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1060

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 273/904 (30%), Positives = 425/904 (47%), Gaps = 195/904 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFID + L RGD I+ SLL  IE S I I 
Sbjct: 18  YQVFLSFRGSDTRYGFTGNLYKALTDKGINTFIDKNGLQRGDEITPSLLKAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      F+ V+P+ VR +  S+G   +   KRF
Sbjct: 78  VFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTVVRHRKGSYGEALAEHEKRF 137

Query: 100 ---PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
              P+ M+R   WK AL++AA+LSG+  +    E KLI +I   +  ++           
Sbjct: 138 QNDPKNMERLQGWKKALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISRQPLHVATYP 197

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  +++++SLL  GS+ GV  + I+GIGG+ K T+A  ++N ++  FEGS F  +VR
Sbjct: 198 VGLQSRVQQVKSLLDEGSDDGVHMVGIYGIGGLGKSTLARQIYNFVADQFEGSCFLHDVR 257

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E      +K LQ+KLL      E+  D     I     RL RKK+ ++ DDV +      
Sbjct: 258 ENSAQNNLKYLQEKLLLKTTGLEIKLDHVSEGIPVIKERLCRKKILLILDDVDNLKQLHA 317

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTR+K +L +      + ++ L   +A +L    AF  D + + 
Sbjct: 318 LAGGLDWFGCGSRVIITTRNKDLLSSHGIESTHAVEGLNETEALELLRWMAFKSDKVPSG 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++ ++A+ YA G+PL L+V+G  L G+S E W+  +   + IP+ EI+++LK+SYD+L
Sbjct: 378 YEDILNRAVAYAFGLPLVLEVVGSNLFGKSIEDWKHTLDGYDRIPNKEIQKILKVSYDAL 437

Query: 372 DDSQKNVFLDIACFLEG----EHRDEVISIFD----------ASKSLINLDLFY------ 411
           ++ +++VFLDIAC  +G    E  D + + +D          A KSL+ +  +Y      
Sbjct: 438 EEEEQSVFLDIACCFKGYQWKEFEDILCAHYDHCITHHLGVLAGKSLVKISTYYPSGSIN 497

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            +R+HDL++DMG+E+VR+ES   PG+R+RLW  +DI  VLK+NTGT  IE I ++++ + 
Sbjct: 498 DVRLHDLIKDMGKEVVRQESPKEPGERSRLWRQEDIIHVLKENTGTSKIEMIYMNLHSME 557

Query: 472 REIHMNSYAFSKMPKL---------------------RFLRFYGDKNKCMVSHLEGVPFA 510
             I     AF KM KL                     R L++ G  +KC+ S +    F 
Sbjct: 558 SVIDKKGKAFKKMTKLKTLIIENGLFSGGLKYLPSSLRVLKWKGCLSKCLSSSILNKKFQ 617

Query: 511 EVRHLEWPQCP-------------LKTLNI-CAEKLVSLKMPCTKVEQL-WDDV---QRL 552
            ++ L    C              L+ L+  C + L+++      + +L W      ++L
Sbjct: 618 NMKVLTLDYCEYLTHIPDVSGLSNLEKLSFTCCDNLITIHNSIGHLNKLEWLSAYGCRKL 677

Query: 553 ----PSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
               P  L + K  I +E   C+ L+  P+   ++ +++ + +  T+I ELP S   LS 
Sbjct: 678 EHFRPLGLASLKKLILYE---CECLDNFPELLCKMAHIKEIDISNTSIGELPFSFQNLSE 734

Query: 606 VKRLILSNN-------------------------------------------SNLERIPE 622
           +  L +++                                            SN + +PE
Sbjct: 735 LHELTVTSGMKFPKIVFSNMTKLSLSFFNLSDECLPIVLKWCVNMTHLDLSFSNFKILPE 794

Query: 623 SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
            +R    L  + +  CE L+ +  +P NL  L AR C SL      +     +       
Sbjct: 795 CLRECHHLVEINVMCCESLEEIRGIPPNLKELCARYCKSLSSSSRRMLMSQKL------- 847

Query: 683 FLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP-GNE-IPKWFRHQSMGSSATLKTRP 740
                                   E G  K +YFP G E IP WF HQS G   +   R 
Sbjct: 848 -----------------------HEAGCTK-IYFPNGREGIPDWFEHQSRGPIISFWFRK 883

Query: 741 PRPA 744
             P+
Sbjct: 884 EIPS 887


>gi|357469133|ref|XP_003604851.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505906|gb|AES87048.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1890

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 251/771 (32%), Positives = 387/771 (50%), Gaps = 94/771 (12%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
            MYDVFLSF G+D    F SHL+  L    I TF DD  I RGD IS SLL  I  S I+I
Sbjct: 865  MYDVFLSFSGKDCCTKFISHLYTSLQNAGIYTFRDDDEIQRGDRISMSLLKAIGRSRISI 924

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            ++ S  YA+SRW                      FY VDPS VR Q   FG+ F  L   
Sbjct: 925  VVLSTTYANSRWCMLELVKIMEIGRTMDLIVVPVFYEVDPSEVRHQKGKFGKAFEELIST 984

Query: 99   FP--EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                E  K  W+  L++   ++G      R ES+ I+ I   V + LD T     +  VG
Sbjct: 985  ISVDESTKSDWRRDLSDIGGIAGIVLIDSRNESEDIKNIVQRVTRLLDRTELFVAEHPVG 1044

Query: 156  VECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            +E  +E    LL I  ++ V  L IWG+GG  K TIA A++N+I   FEG  F LN+RE 
Sbjct: 1045 LESRVEAATKLLNIKNTKDVLILGIWGMGGTGKTTIAKAIYNQIGSEFEGRSFLLNIREF 1104

Query: 215  EETGGIK-DLQKKLLSELSKDGN--MRNIESQLN----RLARKKVRIVFDDVTS------ 261
             ET   +  LQ+K+L ++ K     +R+IES  N    RL++KKV  V DDV        
Sbjct: 1105 WETDTNQVSLQQKVLCDVYKTTKFKIRDIESGKNILRQRLSQKKVLFVLDDVNELDQLKA 1164

Query: 262  ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR+IITTRD  +LK+C  ++   ++++  +++ +LF   AF        
Sbjct: 1165 LFGSREWFGPGSRIIITTRDLHLLKSCRVDEVCAIQDMDESESLELFSWHAFKQPTPTED 1224

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
                +   + Y+ G   A K             W+  + KL  IP  E+++ LK+S+D L
Sbjct: 1225 FATHSKDVVSYSGG--FATK-------------WQKVLEKLRCIPDAEVQKKLKVSFDGL 1269

Query: 372  DD-SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
             D ++K++FLDIACF  G  R++VI I +               +SL+ +D   ++RMHD
Sbjct: 1270 KDVTEKHIFLDIACFFIGMDRNDVIQILNGCGFFADIGIKVLVERSLLIIDNRNKLRMHD 1329

Query: 418  LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
            LLRDMGR+I+ +ES + P KR RLW  ++++ +L KN GTEA++G++L+  + N  + +N
Sbjct: 1330 LLRDMGRQIIYEESPSDPEKRGRLWRREEVFDILSKNKGTEAVKGLALEFPRKN-TVSLN 1388

Query: 478  SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK--LVSL 535
            + AF KM KLR L+  G +      +L G    E+R L W + PL       ++  L+++
Sbjct: 1389 TKAFKKMNKLRLLQLSGVQLNGDFKYLSG----ELRWLSWHRFPLAYTPAEFQQGSLIAI 1444

Query: 536  KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIR 594
             +  + ++Q+W   Q L  +L       +  +I+      LP    N+E L +K   ++ 
Sbjct: 1445 TLKYSNLKQIWKKSQML-ENLKILNLSHSQNLIETPDFTYLP----NIEKLVLKDCPSLS 1499

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
             +  S+G L  +  + L++ + L+ +P SI  L  L  L +S C ++  L E    +  L
Sbjct: 1500 TVSHSIGSLCKLLMINLTDCTGLQNLPRSIYKLKSLETLILSGCSKIDKLEEDVEQMESL 1559

Query: 655  SA--RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
            +    + T++ K+P  +    S+ Y++L  F     +    +++  WM  S
Sbjct: 1560 TTLIADKTAITKVPFSIVRSKSIGYISLGGFKGFSRDVFPSLIR-SWMSPS 1609



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 218/521 (41%), Gaps = 116/521 (22%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDN-----ISQSLLGTIEAS 55
           +YDV+LSF  ED+R    S    + S   +  F +DQ    ++      S S L  IE  
Sbjct: 374 IYDVYLSFYDEDSRSFVLSIYTALTSKPGVVVFWEDQWFGSEDRSSKQPSNSALNVIEDC 433

Query: 56  CIAIIIFSERYASSRW------------------------FFYRVDPSHVR--KQSHSFG 89
            IA+IIFS+ Y  SRW                        F+  V  S  R   +   FG
Sbjct: 434 EIAVIIFSKNYTKSRWCLQELEKITQCCQRTTDGLIFLSVFYDDVYSSDKRLWVRRDIFG 493

Query: 90  RHF-SRLR------KRFPEKMKRWKNALTEAADLSGFDS--------NVIRPESKLIEEI 134
             F  R+           +K   W  A+T  A  S +D         N    ES+LI+ +
Sbjct: 494 EDFVDRISIEKETCSEDEDKFMTWVAAVTNEA--SKYDELYSLHCRHNSHEHESELIKIV 551

Query: 135 ANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAV 194
              ++ +    F+        +    +++  LL   S     L +WG+ GISK TIA A+
Sbjct: 552 VTRMMSKKRYQFKE------SIHSHAQDVIQLLK-QSRSPLLLGMWGMSGISKSTIAQAI 604

Query: 195 FNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRL 247
           FN+I  +FE      NV EA E+  G   LQ +LL  +     ++  ++ES       RL
Sbjct: 605 FNQIGPYFEHKCNIDNVGEAWEQDNGQVSLQDELLCFIGGATEIKIPSVESGRIILKERL 664

Query: 248 ARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVY 291
             K+V ++  +V                  G ++IITT ++ +LK    +  +R+KEL  
Sbjct: 665 QHKRVLLLLYNVDKLEQLKALCGSRDWFGPGRKIIITTSNRHLLKEHGVDHIHRVKEL-- 722

Query: 292 ADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRK 351
                      FG             K + Y  G+P ALK LG  L       W++ +R+
Sbjct: 723 --------DNKFG-------------KIVSYCGGLPFALKELGMSLYLSEMLDWKTVLRR 761

Query: 352 LE--IIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------- 401
           +E   IP   + E L+ S   L   +K +F DIACF  G  +++V+   + S        
Sbjct: 762 IERFSIPKGSLLEALEKSLSDLYVEEKQIFFDIACFFIGMSQNDVLQTLNRSIQRATLQI 821

Query: 402 -----KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGK 437
                KS + +D   +++MH LL+ M R+I+ +ES N   +
Sbjct: 822 NCLEDKSFVTIDENNKLQMHVLLQAMARDIINRESSNKTNQ 862



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 177 LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV-REAEETGGIKDLQKKLLSELSKDG 235
           L IWG+ GI K TIA A++N+I   F+  Y   +V R  E+  G   LQ KLL  +  + 
Sbjct: 231 LGIWGMTGIGKSTIAEAIYNQIGPFFKHKYNIPDVMRSWEQDNGQVSLQDKLLCFICGET 290

Query: 236 --NMRNIESQL----NRLARKKVRIVFDDVTS----------------GSRVIITTRDKQ 273
              +R +ES       RL  K+V ++ D+V                  GS++IITT ++Q
Sbjct: 291 EIKIRTVESGRVILKERLQHKRVLLLLDNVDKLEQLKALCGNRDWFGPGSKIIITTSNRQ 350

Query: 274 VL 275
           +L
Sbjct: 351 LL 352


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 264/803 (32%), Positives = 400/803 (49%), Gaps = 130/803 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF+GEDTR NFT HL+  L    I+TF D++ L +G +I+  L   IE S I II
Sbjct: 20  YDVFLSFKGEDTRRNFTDHLYTALVACGIQTFRDNEELEKGGDIASDLSRAIEESRIFII 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFG----RHFSRL 95
           IFS+ YA S W                      FY VDPS VR+Q  +FG     H    
Sbjct: 80  IFSKNYAYSTWCLNELVKIVECMKQKDIMVLPIFYHVDPSDVRRQRGNFGDALAHHEGDA 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            ++  + +++W+ ALT+AADLSG   +  + E++ + EI N ++  L+    +  K +VG
Sbjct: 140 DQQKKQMVQKWRIALTKAADLSGCHVDD-QYETEAVNEIINKIVGSLNCQPLNVGKNIVG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E ++S++      V  + I G GGI K TIA A++N+IS  ++GS F  N+RE  
Sbjct: 199 ISVHLENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRERS 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVF---DDVTS----- 261
           + G I  LQK+LL  + K    R  N++  +N + R    K+V ++F   DD+T      
Sbjct: 259 K-GDILQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLA 317

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    S +IIT+RDKQVL +   +  Y + +    +A +LF  WAF  +    ++ 
Sbjct: 318 EEKDWFDVKSTIIITSRDKQVLAHYGVHISYEVSKFNNKEAIELFSLWAFKQNLPKEAYK 377

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD
Sbjct: 378 NLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDD 437

Query: 374 SQKNVFLDIACFLE-----------GEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDM 422
             K +FLD+ACF +           G H +  I+  +  K LI +     I MHDL++ M
Sbjct: 438 MDKKIFLDVACFFKEKDKYFVSRILGPHAEYGIATLN-DKCLITISK-NMIDMHDLIQQM 495

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREI+R+E     G+R+R+W   D Y VL +N GT AIEG+ LD+ K +  I     +F 
Sbjct: 496 GREIIRQECPEDLGRRSRVW-DSDAYHVLTRNMGTRAIEGLFLDICKFD-PIQFAKESFK 553

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPF----------------AEVRHLEWPQCPLKTL- 525
           +M +LR L+ +      ++S     P+                +++ +L W    L++L 
Sbjct: 554 QMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEFSSKLTYLHWDGYSLESLP 613

Query: 526 -NICAEKLVSLKMPCTKVEQLWD------------------------------------- 547
            N  A+ LV L +  + ++QLW                                      
Sbjct: 614 TNFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSVPNLEILTLE 673

Query: 548 ---DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESL- 600
               ++ LP  +  +K   T     C  L+R P+    +  L  L + GT I+ LP SL 
Sbjct: 674 GCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLF 733

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNC 659
             L  ++ L    +S L +IP  I  LS L  L +SHC  ++  +P   C+L  L   N 
Sbjct: 734 EHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNL 793

Query: 660 TS--LEKLPAGLSSMSSVLYVNL 680
            S     +PA ++ +S +  +NL
Sbjct: 794 KSNDFRSIPATINQLSRLQVLNL 816



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 106/242 (43%), Gaps = 51/242 (21%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVK-------------- 589
            +++  LP S+C   +  T  ++ C  L +LP+ L   ++LEYL VK              
Sbjct: 1202 ENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSG 1261

Query: 590  ----------GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                         +RE+P  +  LS ++ L L  N     IP+ I  L  L    +SHC+
Sbjct: 1262 LCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGN-RFSSIPDGINQLYNLIVFDLSHCQ 1320

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
             LQ +PELP +L  L A  C+SLE     LSS S++L+ +L    K    E         
Sbjct: 1321 MLQHIPELPSSLEYLDAHQCSSLEI----LSSPSTLLWSSLFKCFKSRIQEF-------- 1368

Query: 700  MKHSLYEERGIKKSMYFPG-NEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAV 757
                   E   K  M+ PG N IP W  HQ  GS  T+  R PR    N   + FA C++
Sbjct: 1369 -------EVNFKVQMFIPGSNGIPGWISHQKNGSKITM--RLPRYWYENDDFLGFALCSL 1419

Query: 758  VV 759
             V
Sbjct: 1420 HV 1421



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 29/224 (12%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKM---LERLPDE---LENLEYLTVKGTTIRE--LPESL 600
           ++ LPSSL  F+     EI+  +M   L ++P +   L +LE L +    I E  +P  +
Sbjct: 725 IKVLPSSL--FEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDI 782

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             LS +K L L +N +   IP +I  LS+L  L +SHC+ LQ +PELP +L LL A    
Sbjct: 783 CHLSSLKELNLKSN-DFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSN 841

Query: 661 SLEKLPAGLSSMSSVLYV-NLCNFLKLDPNELSEIVKDG-WMKHSL--YEERGIKKSMYF 716
                    SS +S L V +L N    +  +L+   ++  W ++S+  Y  +GI   +  
Sbjct: 842 P-------TSSRASFLPVHSLVNCFNSEIQDLNCSSRNEVWSENSVSTYGSKGI--CIVL 892

Query: 717 PGNE-IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
           PG+  +P+W     M         P      N+ + FA C V V
Sbjct: 893 PGSSGVPEWI----MDDQGIATELPQNWNQNNEFLGFALCCVYV 932



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 28/128 (21%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLE------------------ 618
            P EL+ L     K  T++ LP S+     +  L  S  S LE                  
Sbjct: 1119 PSELDGLCLRDCK--TLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLD 1176

Query: 619  -----RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR---NCTSLEKLPAGLS 670
                  IP SI+ L  L +L +++CE L  LPE  CNL  L      +C  L KLP  L 
Sbjct: 1177 GTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLG 1236

Query: 671  SMSSVLYV 678
             + S+ Y+
Sbjct: 1237 RLQSLEYL 1244


>gi|297805928|ref|XP_002870848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316684|gb|EFH47107.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 245/778 (31%), Positives = 402/778 (51%), Gaps = 86/778 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F +H+      K I  FID+ + R  +I   L+  I+ S IAI++
Sbjct: 63  HDVFPSFHGADVRKTFLAHILKEFKGKGIVPFIDNDIERSKSIGPELIEAIKGSKIAIVL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS W                      FY VDP+ V+KQ+  FG+ F +  K + 
Sbjct: 123 LSRNYASSSWCLNELVEIMNCREELGQTVMTIFYDVDPTDVKKQTGDFGKVFKKTCKGKT 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E +KRW+N L   A ++G  S     E+ + ++IA DV   L+    S++  G +G+  
Sbjct: 183 KEDIKRWQNVLEAVATIAGEHSRNWDNEAAMTKKIATDVSNMLNRYSPSRDFDGFIGMGA 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            + E+ESLLC+ S+ V  + IWG  GI K TIA  ++++ S  FE S F  N++E     
Sbjct: 243 HMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSESFELSIFMENIKELMYTR 302

Query: 214 ---AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
              ++E      LQ++ LS++   KD  + ++    +RL  K+V IV D +         
Sbjct: 303 PVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAI 362

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITT+D+++LK    N  Y+++     +A+++FC +AFG +      
Sbjct: 363 AKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGF 422

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL  +  K    +PL L+V+G +  G  +  W +A+ +L+I     I+ +LK SYD+L 
Sbjct: 423 EELAWQVTKLLGNLPLGLRVMGSHFRGMPRHEWVNALPRLKIRLDASIQSILKFSYDALC 482

Query: 373 DSQKNVFLDIACFLEGEHRDEV-----ISIFD--------ASKSLINLDLF----YRIRM 415
           D  K++FL IAC    E   +V     +S  D        A KSLI +++       I++
Sbjct: 483 DEDKDLFLHIACLFNNEEMVKVEDYLALSFLDVRQGLHLLAEKSLIAIEILSTNHTSIKV 542

Query: 416 HDLLRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
           H+LL  +GR+IVR     + I  PGKR  L   +DI +VL  NTG+  + GI L++  ++
Sbjct: 543 HNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDICEVLTDNTGSRNVIGILLEVENLS 602

Query: 472 REIHMNSYAFSKMPKLRFLRFY----GDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL- 525
            +++++   F  M   +FLRF+    G+ +K  +   L  +P  ++R +EW + P+K L 
Sbjct: 603 GQLNISERGFEGMSNHKFLRFHGPYEGENDKLYLPQGLNNLP-RKLRIIEWFRFPMKCLP 661

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQR-LPSSLCTFKTPITFEIIDCKMLERLPD--ELE 581
            N C + LV L M  +K++ +W   Q    S L         ++ + K L+ LPD     
Sbjct: 662 SNFCTKYLVQLHMWNSKLQNMWQGNQESRRSDLPPLGNLKRMDLRESKHLKELPDLSTAT 721

Query: 582 NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           NLE L + G +++ ELP S+G L  ++ L+L   S LE +P +I +L  L +L ++ C  
Sbjct: 722 NLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKLEALPTNI-NLESLDYLDLADCLL 780

Query: 641 LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVK 696
           +++ PE+  N+  L+    T+++++P+ + S S +  L ++  + LK  P+ L  I K
Sbjct: 781 IKSFPEISTNIKRLNLMK-TAVKEVPSTIKSWSPLRKLEMSYNDNLKEFPHALDIITK 837


>gi|357469545|ref|XP_003605057.1| TMV resistance protein N [Medicago truncatula]
 gi|355506112|gb|AES87254.1| TMV resistance protein N [Medicago truncatula]
          Length = 1626

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 247/757 (32%), Positives = 388/757 (51%), Gaps = 89/757 (11%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
            MYDVFLSFRGED R  F SHL+  L    +  F DD  I RGD IS +L+  +  S I+I
Sbjct: 518  MYDVFLSFRGEDCRAKFISHLYISLQNSGLYVFKDDDGIQRGDQISVALIQAVGQSKISI 577

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL--R 96
            ++ S+ +A+S+W                      FY VDPS VR Q+  FG+ F  L   
Sbjct: 578  VVLSKNFANSKWCMTELERIVEISRTKGMVLVPVFYEVDPSEVRHQTGEFGKAFECLLST 637

Query: 97   KRFPEKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            K   E  KR WK AL E   ++G        ES+ I++I + V   LD T        VG
Sbjct: 638  KSVDEYTKRNWKAALHEVGSIAGVVILKSSDESEDIKKIVDLVTHLLDKTELFVADHPVG 697

Query: 156  VECSIEEIESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            +E  + ++  LL    S+    L IWG+GGI K T+A AV+NKI   F+   F  NVR+ 
Sbjct: 698  LESRVRDVIQLLSRQKSKDPQLLGIWGMGGIGKTTLAKAVYNKIRHDFDAKSFLFNVRDV 757

Query: 215  EETGGIK-DLQKKLLSELSKDGNMR--NIESQ----LNRLARKKVRIVFDDVTS------ 261
             +    K  LQ++LL ++ K   ++  ++ES       RL  KK+ +V DDV        
Sbjct: 758  WKVDDDKVSLQQRLLFDICKTTKIKIDSVESGKKILQERLCSKKIFLVIDDVNKLDQLNA 817

Query: 262  ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GSR++ITTRD  +L     +  YRMKE+  +++ +LF   AF        
Sbjct: 818  LCGDRKWFGKGSRILITTRDDDLLSRLEVDHVYRMKEMDSSESLELFNWHAFKQSTSREG 877

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEIIPHVEIEEVLKISYDS 370
               ++   +KY+ G+PLAL+V+G +L  +  K  W+  + KL++IP+ E+ E L+IS+D 
Sbjct: 878  FTNISRDVVKYSGGLPLALQVIGSFLSTKKIKAEWKDVLEKLKLIPNNEVLEKLRISFDG 937

Query: 371  L-DDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L DD  K++FLDIA F  G  R++V  I                 +SL+ +D   +I MH
Sbjct: 938  LSDDDVKDIFLDIAFFFIGMDREDVTKILQDCGHFSVIGISVLVQQSLVTVDRKNKIGMH 997

Query: 417  DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            DLLRDMGREIVRK S +   + +RLWH++D+++ L  +T + A++G+SL M++++   ++
Sbjct: 998  DLLRDMGREIVRKISKDADKEPSRLWHYEDVHK-LPIDTSSLAVKGLSLKMSRMDSTTYL 1056

Query: 477  NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             + AF KM KLRFL+  G +      +L       +R L W   PLK +  +   + LV+
Sbjct: 1057 ETKAFEKMDKLRFLQLVGIQLNGDYKYLS----RHLRWLSWHGFPLKYIPADFHQDTLVA 1112

Query: 535  LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM---LERLPD--ELENLEYLTVK 589
            + +  + +E++W   Q L          +  +I++      L   PD  +L NLE L +K
Sbjct: 1113 VVLKYSNLERVWRKSQFL----------VKLKILNLSHSHNLRHTPDFSKLPNLEKLILK 1162

Query: 590  G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
               ++  +  ++G L  +  + L + + L  +P SI  L  L  L +S C ++  L E  
Sbjct: 1163 DCPSLSSVSSNIGHLKKILLINLKDCTGLRELPRSIYKLDSLKTLILSGCTKIDKLEEDI 1222

Query: 649  CNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCNF 683
              +  L+    + T++ ++P  +    S+ +++LC +
Sbjct: 1223 EQMKSLTTLVADDTAITRVPFAVVRSKSIAFISLCGY 1259



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 245/504 (48%), Gaps = 71/504 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           M+DVFLS+  +    +F   L   L+      +I++  L  G+   Q     I+A   +I
Sbjct: 19  MFDVFLSYHDKYIGKSFALDLSSALTQAGYAVYINNHDLTSGE---QRNSAAIKACRTSI 75

Query: 60  IIFSERYASSRWF---------------------FYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IIFS ++  S WF                     FY VDPS V KQ   FG  F     R
Sbjct: 76  IIFSSKFDGSTWFLEEMEKILECRRTIKQVFVPVFYDVDPSDVLKQKGVFGEAFVDCIAR 135

Query: 99  ---FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIAND---VLKRLDATFQSKNKG 152
                +   R+++AL EAA++SGF     R +   I +I      +++   + F +++  
Sbjct: 136 GILTEDSSIRYRDALFEAANISGFRMMDTRSQYNEINDIVQGFCHLIEDQKSLFIAEHP- 194

Query: 153 LVGVECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VGVE  ++++  LL    +E    + IWG+ G+ K  IA A +N++S  F+      NV
Sbjct: 195 -VGVEARVKDVIQLLNSEQAENTMIVGIWGMAGVGKTIIAKATYNQMSFTFDCKSILKNV 253

Query: 212 REAEETG--GIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTS-- 261
            E  ++G  G+   Q++LL ++ K   +    +ES    L R    KKV +V D V    
Sbjct: 254 NETCKSGDDGLVSFQRQLLLDICKTTKIHIDTVESGKKILQRSLCHKKVFLVLDGVNKLE 313

Query: 262 --------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                         GSR++ITT DK +L+N   +  YRMK +   ++ KLF   AF    
Sbjct: 314 QLNALCGDRDWFGHGSRIVITTSDKHILRNLQLDHVYRMKYMDNTESLKLFSWHAFRTPS 373

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              S+ +L    ++Y  G+P+AL++LG YL  RS + W+ A++K + I   +IE+ L+ +
Sbjct: 374 PKESYADLCRDVVEYCGGLPVALEILGSYLFDRSVQEWKIALQKFKTILPYQIEKKLRKN 433

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIR 414
            D LD   ++VFL IA    G H+D+VI   + S             KSL+ +D   RI 
Sbjct: 434 LDVLDHDNQDVFLKIATLFIGMHKDDVIQTLNYSGHFPEIAISILEDKSLLTIDGNNRIG 493

Query: 415 MHDLLRDMGREIVRKESINHPGKR 438
           MH LLR MGREI+R++S++    +
Sbjct: 494 MHTLLRAMGREIIRQQSMDMAATK 517


>gi|297838205|ref|XP_002886984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332825|gb|EFH63243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 244/748 (32%), Positives = 396/748 (52%), Gaps = 94/748 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++ VF SFRGED R +F SH+H     K I  FID ++ RG++I   ++  I  S IAI+
Sbjct: 22  IHQVFPSFRGEDVRRDFLSHIHKEFQRKGITPFIDSEIKRGESIGLEIVQAIRGSKIAIV 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKR 98
           + S  YASS W                      FY+VDPS V+K + SFG  F  R   +
Sbjct: 82  LLSRNYASSSWCLDELVEIMKCKEELSQIVIPIFYKVDPSDVKKLTGSFGSVFEDRCAGK 141

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVE 157
             E ++RW+ AL + A ++G+DS     E+ +IE+IAND+   L+ +  S++  GL+G+ 
Sbjct: 142 TNELIRRWRQALAKVATITGYDSRCWDNEAAMIEKIANDISNMLNFSTPSRDFDGLIGMR 201

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE---- 213
             ++ +E LLC+ S+ V  + IWG  GI K TIA  +F++ S  FE S F  NV++    
Sbjct: 202 AHMKIMEPLLCLHSDEVRMIGIWGPSGIGKTTIARVLFSQFSGTFELSVFMENVKDLMYT 261

Query: 214 ----AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
               +++      LQK+ +S++   KD  + ++    +RL  KKV IV D++        
Sbjct: 262 RPVCSDDYSAKIHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDA 321

Query: 262 ----------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     GSR+IITT+D+++LK +   N  Y++      +A ++FC +AFG +    
Sbjct: 322 IAKETRWFGCGSRIIITTQDRKLLKAHDGINDIYKVDFPSAYEACQIFCMYAFGQNFPKD 381

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              EL  +  +   G+PL L+V+G +  G SK  W +A+ +L       I+ +LK SY++
Sbjct: 382 GFEELAWEVARLLGGLPLGLRVMGSHFKGMSKHEWINALPRLRTRLDANIQSILKFSYNA 441

Query: 371 LDDSQKNVFLDIACFLEGEHRDEV--------------ISIFDASKSLINLDLFYRIRMH 416
           L +  K++FL IAC    +  ++V              I +  A KSLI+++   RI+MH
Sbjct: 442 LCEEDKDLFLQIACLFNNKRIEKVEEHLAEKSLDVRQGIHVL-AEKSLISIEE-GRIKMH 499

Query: 417 DLLRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           +LL  + +EIVR     +SI  PGKR  L H  DI ++L  +TG++++ GI    ++++ 
Sbjct: 500 NLLEKLAKEIVRHKPGHQSIREPGKRQFLVHATDICEILTNDTGSKSVIGIHFYSSELSS 559

Query: 473 EIHMNSYAFSKMPKLRFLRF---YGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
           E++++  AF  M  L+FLRF   YGD+ +K  +         +++ LEW + PL  +  N
Sbjct: 560 ELNISERAFEGMSNLKFLRFYYRYGDRSDKLYLPQGLNYLSRKLKILEWDRFPLTCMPSN 619

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL- 583
            C E LV L M  +K+ +LWD    L +    +       +   K+L+ LPD     NL 
Sbjct: 620 FCTEYLVELNMRFSKLHKLWDGNMPLANLKWMY-------LNHSKILKELPDLSTATNLQ 672

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E   VK +++ ELP S+G+ + +++L L+  ++L  +P SI +L KL  L ++ C +L+ 
Sbjct: 673 ELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCTKLEV 732

Query: 644 LPELPCNLGL-----LSARNCTSLEKLP 666
              LP N+ L     L   +C  L++ P
Sbjct: 733 ---LPANINLESLEELDLTDCLVLKRFP 757



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 32/149 (21%)

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
           CTK+E L       P+++   ++    ++ DC +L+R P+   N++ L + GT I+E+P 
Sbjct: 727 CTKLEVL-------PANI-NLESLEELDLTDCLVLKRFPEISTNIKVLKLIGTAIKEVPS 778

Query: 599 SLGRLSWVK--RLILSNNSNL--------------------ERIPESIRHLSKLTFLFIS 636
           S    SW++   L LS N NL                    + IP  ++ +S+L    +S
Sbjct: 779 STK--SWLRLCDLELSYNQNLKESQHAFDIITTMYINDKEMQEIPLWVKKISRLQTFILS 836

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKL 665
            C++L +LP+L  +L  L   NC SLE+L
Sbjct: 837 GCKKLVSLPQLSDSLSYLKVVNCESLERL 865


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 246/745 (33%), Positives = 383/745 (51%), Gaps = 99/745 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR+NFT HL+  L  + I TF DD+L RG+ I+  LL  IE S  +I++
Sbjct: 21  YDVFLSFRGEDTRNNFTDHLYTALVQRGINTFRDDKLRRGEEIAPELLKAIEESRSSIVV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA SRW                      FY VDP+ VRKQ+ SFG  F+   + + 
Sbjct: 81  FSKTYAHSRWCLDELAKIMECRREYRQIVLPIFYHVDPADVRKQTGSFGEAFTSYEENWK 140

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            K +RW+ ALTEA  ++G+  N    ES+ IEEI N +LKRL+  F    + +VG+   +
Sbjct: 141 NKAQRWREALTEAGYIAGWPINKGY-ESRPIEEIINHILKRLNPKFLPIKEHMVGMYVHL 199

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           EE++SLL +  + V  + I+GIGGI K TIA  V+N I   F G+ F   V+   +    
Sbjct: 200 EELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRSKCYND 259

Query: 221 KDLQKKLLSELSKDGN---MRNIESQLN----RLARKK----------------VRIVFD 257
           +    + L     +G    + +I   +N    RL  KK                +   + 
Sbjct: 260 QLQLLQELLHGIMEGGHLKLESINDGMNMIKGRLGSKKVLVVFDDVDDLDQVRGIVANYK 319

Query: 258 DVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRDK +L     +  Y  K L Y DA +LF   AF   ++   ++E+++
Sbjct: 320 WFGGGSRIIITTRDKHLLDQYEVHASYEAKVLCYEDAIELFSWHAFKVQNIREDYVEMSN 379

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             IKYAQG+PLAL+VLG  L  ++K+ W+SA+ KL+  P+ +I +VLKIS D LD +Q+ 
Sbjct: 380 SMIKYAQGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNKKINDVLKISLDGLDRTQRE 439

Query: 378 VFLDIACFLEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
           +FL IACF +GE +D ++ I D            + LI +  + ++ MHDL++ MG  I 
Sbjct: 440 IFLHIACFFKGEAKDFILRILDDHAEYDIGVLCDRCLITIS-YNKVEMHDLIQQMGWTID 498

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM----------N 477
           R++ +  P K  RLW   DI +      G E +E IS D+++ ++E+ +           
Sbjct: 499 REKHLKDPSKWIRLWDPDDISKAFSAQEGMEQVEVISYDLSR-SKEMQILGNLKIIDLSR 557

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKM 537
           S   +KMP+L  +    + N      L+  P  E+R                 +L  + +
Sbjct: 558 SRLLTKMPELSSMPNLEELNLVCCERLKKFP--EIRE-------------NMGRLERVHL 602

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIID-CKMLERLPDELENLEYLTV---KGTTI 593
            C+ ++++   ++ LP+        + F  +  C+  ++ PD   NL +L V     T I
Sbjct: 603 DCSGIQEIPSSIEYLPA--------LEFLTLHYCRNFDKFPDNFGNLRHLRVINANRTDI 654

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---N 650
           +ELPE     S  K  ++   + ++ +P SI HL++L  L + +C+ L++LP   C   +
Sbjct: 655 KELPEIHNMGSLTKLFLIE--TAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKS 712

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSV 675
           LG+L+   C++L   P  +  M  +
Sbjct: 713 LGVLNLNGCSNLVAFPEIMEDMEDL 737



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 100/259 (38%), Gaps = 54/259 (20%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL----TVKGTTIRELPESLGRLS 604
           +  LP S+   K     E+ +C+ L  LPD + NL +L        + +  LP++L  L 
Sbjct: 747 ITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQ 806

Query: 605 WVKRLILSNNSNLER-------------------------IPESIRHLSKLTFLFISHCE 639
           W  R +     NL +                         IP +I  LS L  L ++HC+
Sbjct: 807 WCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQ 866

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS-EIVKDG 698
            L+ +PELP  L +L A+ C  L      LS+ SS L+  L N  K        EI  D 
Sbjct: 867 MLEEIPELPSRLEILEAQGCPHL----GTLSTPSSPLWSYLLNLFKSRTQSCEYEIDSDS 922

Query: 699 -WMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
            W  H       + K +      IPKW  H SMG  A ++    R    N          
Sbjct: 923 LWYFH-------VPKVVIPGSGGIPKWISHPSMGRQAIIELPKNRYEDNN---------- 965

Query: 758 VVFPAFLKYFRHKSGEDDW 776
             F  F  +F H   +D W
Sbjct: 966 --FLGFAVFFHHVPLDDFW 982


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 261/735 (35%), Positives = 383/735 (52%), Gaps = 85/735 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L  + IKTF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDHLYDKLQWRGIKTFRDDPQLERGTAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT---FQSKNKGLV 154
           E  K    W++ALT+ A L+G+ S   R E++LI EI  ++  ++  +   F S +K LV
Sbjct: 139 EDNKEVEGWRDALTKVASLAGWTSESYRYETQLIREIVQELWSKVHTSLTVFGSSDK-LV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  +EEI+ LL   +  V  + IWG+GGI K  +A  V+ KIS  F+   F  +VR+A
Sbjct: 198 GMDTKLEEIDVLLDKEANDVRFIGIWGMGGIGKTILARLVYEKISHQFDVCIFLDDVRKA 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
               G+  LQK++LS+L K+ N+   N+   +  + R    K V +V D+V         
Sbjct: 258 STDHGLVYLQKQILSQLLKEENVPVWNVNGGITMIKRCACNKAVLLVLDNVDQSEQLENL 317

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTR++ VL      K Y +K L   +A +LF   AF     +  +
Sbjct: 318 VGEKDWFGLRSRIIITTRNQSVLVTHGVEKPYELKGLNKDEALRLFSWEAFKKYEPEEDY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
              T   + YA G+PLALK LG +L  RS   W SA+ KL+  P   + ++L++SYD LD
Sbjct: 378 AGHTMTFVLYAGGLPLALKTLGSFLYKRSLHSWSSALAKLQNTPDKTVFDLLRVSYDGLD 437

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLF-YRIRMHDLLRDMGREIVRKES 431
           + +K +FLDIACF       + + +    KSL+ +  F  +I +HDL+R+MG EIVR+ES
Sbjct: 438 EMEKKIFLDIACF-----SSQYVLV---EKSLLTISSFDNQIIIHDLIREMGCEIVRQES 489

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
              PG R+ LW   DI+ V  KNTGTE  EGI L ++K+  E   N  AFSKM KL+ L 
Sbjct: 490 YEEPGGRSLLWLRNDIFHVFAKNTGTEVTEGIFLHLHKL-EEADWNLQAFSKMCKLKLLY 548

Query: 492 FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDV 549
            +   N  +    + +P A +R L+W   P K+L      + L  L +  + +  LW+ +
Sbjct: 549 IH---NLRLSLGPKFLPDA-LRILKWSWYPSKSLPPGFQPDDLTILSLVHSNITHLWNGI 604

Query: 550 Q---RLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRL 603
           +   +L S   ++   +T          R PD   + NLE L ++G T++ ++  S+  L
Sbjct: 605 KYLGKLKSIDLSYSINLT----------RTPDFTGIPNLEKLVLEGCTSLVKIHPSIALL 654

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTS 661
             +K     N  +++ +P  + ++  L    IS C +L+ +PE    +  LS       +
Sbjct: 655 KRLKIWNFRNCKSIKSLPSEV-NMEFLETFDISGCSKLKIIPEFVGQMKRLSKLYLGGPA 713

Query: 662 LEKLPAGLSSMSSVL 676
           +EKLP+ +  +S  L
Sbjct: 714 VEKLPSSIEHLSESL 728


>gi|356561376|ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 282/908 (31%), Positives = 433/908 (47%), Gaps = 191/908 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT HL+  L  + I TFIDD+ L RG+ I+  L+  IE S IAI 
Sbjct: 12  YDVFLSFRGSDTRHGFTGHLYKALCDRGIHTFIDDEELQRGEEITPLLVKAIEGSRIAIP 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY VDPS VR Q  S+    +  ++RF
Sbjct: 72  VFSKNYASSTFCLDELVHILACVKEKGTLVLPVFYEVDPSDVRHQRGSYKDALNSHKERF 131

Query: 100 ---PEKMKRWKNALTEAADLSGFD-SNVIRPESK--LIEEIANDVLKRLDATFQSKNKGL 153
               EK+++W+N+L++AA+L+G+   + I  E +   I  I  +V ++++ T        
Sbjct: 132 NDDQEKLQKWRNSLSQAANLAGYHFKHGIENEYEYDFIGNIVKEVSQKINRTVLHVADYT 191

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+E  ++E+ SLL   S GV  + I G+GG+ K T+A A++N I+  FE   F  NVRE
Sbjct: 192 VGLEFRMKEVNSLLNFKSGGVHMVGIHGVGGVGKTTLARAIYNLIADQFEVLCFLDNVRE 251

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDVT------- 260
                G+  LQ+ LLS+   +  ++  +I   +    +RL RKKV +V DDV        
Sbjct: 252 NSIKNGLVHLQETLLSKTIGEKGIKLGSINEAIPIIKHRLHRKKVLLVLDDVDKPDQLHA 311

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGSRVIITTR++ +L        Y +  L + +A +L    AF    +D  
Sbjct: 312 IAGGMDWFGSGSRVIITTRNRHLLTCHGVESIYEVHGLNHKEALELLSWSAFKTGKVDPC 371

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           ++ + ++A+ YA G+PLALKV+G  L G+  E WESA+ + + IP+ +I+++LK+S+DSL
Sbjct: 372 YVNILNRAVTYASGLPLALKVIGSNLIGKRIEEWESALDQYQRIPNKDIQDILKVSFDSL 431

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
           ++ ++N+FLDIAC  +G    EV  I  +               KSLI +D F  + +HD
Sbjct: 432 EEYEQNIFLDIACCFKGYRLSEVKEILFSHHGFCPQYGIGVLIDKSLIKIDCFGNVTLHD 491

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L+ DMG+EIVR+ES   P  R+RLW  +DI QVL++N GT  I+ I+LD      E+  +
Sbjct: 492 LIEDMGKEIVRRESPEEPENRSRLWCPEDIVQVLEENKGTSRIQMIALDYLNY-EEVEWD 550

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
             AF +M  L+ L   G    C  +  + +P + +R LEW + P  +L  +   +KLVSL
Sbjct: 551 GMAFKEMNNLKTLIIRGG---CFTTGPKHLPNS-LRVLEWRRYPSPSLPFDFNPKKLVSL 606

Query: 536 KMP--------------------------CTKVEQLWD-----DVQRLPSSLCT--FKTP 562
           ++P                          C  + ++ D     ++Q L    C    K  
Sbjct: 607 QLPDSCLTSLNWLNSKNRFLNMRVLNFNQCHYITEIPDVCGAPNLQELSFEYCENLIKIH 666

Query: 563 ITFEIID---------CKMLERLPD-ELENLEYLTV------------------------ 588
           ++   +D         C  L   P  +L +LE L +                        
Sbjct: 667 VSVGFLDKLKILDADGCSKLTSFPPMKLTSLEELKLSFCANLECFPEILGKMENVTSLDI 726

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE-- 646
           K T I+ELP S+  LS ++R+ L N   ++ +P +   + +L +L ++ CE L    E  
Sbjct: 727 KDTPIKELPSSIQHLSRLQRIKLKNGGVIQ-LPSTFFAMKELRYLLVNQCEGLLLPVENE 785

Query: 647 ---------LPCNLGLLSARNCTSLEK-LPAGLSSMSSV--------------------- 675
                    +   +G L   +C   +K L +GL   S+V                     
Sbjct: 786 GKEQMSSMVVENTIGYLDLSHCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQ 845

Query: 676 ----LYVNLCNFLK----LDPN----------ELSEIVKDGWMKHSLYEERGIKKSMYFP 717
               LY+  C  L     + PN           L+   +   +   L+E  G K+    P
Sbjct: 846 FLTELYLEACENLHEIGWIPPNLEVFSARECSSLTSECRSMLLNEELHEADGFKE-FILP 904

Query: 718 GNEIPKWF 725
           G  IP+WF
Sbjct: 905 GTRIPEWF 912


>gi|357499337|ref|XP_003619957.1| Resistance-gene protein [Medicago truncatula]
 gi|355494972|gb|AES76175.1| Resistance-gene protein [Medicago truncatula]
          Length = 1118

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 247/749 (32%), Positives = 377/749 (50%), Gaps = 109/749 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L  K I TFIDD  L RGD I+ SL+  IE S I I 
Sbjct: 18  YQVFLSFRGTDTRYGFTGNLYKALIDKGIHTFIDDNDLQRGDEITPSLIKAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS++                      F+ VDP++VR  + S+G   +   KRF
Sbjct: 78  VFSINYASSKFCLDELVHIIHCYKTKGRLVLPIFFGVDPTNVRHHTCSYGEALAEHEKRF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E+++RWK AL++AA+LSG+  +  R E KLI EI   +  +++          
Sbjct: 138 QNDKDNMERLERWKVALSQAANLSGYHDSPPRYEYKLIGEIVKYISNKINRQPLHVANYP 197

Query: 154 VGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+   ++E++SLL  G  +GV  + I+GIGG+ K  +A A++N ++  FEG  F  +VR
Sbjct: 198 VGLHSRVQEVKSLLDEGPDDGVHMVGIYGIGGLGKSALARAIYNFVADQFEGLCFLHDVR 257

Query: 213 EAEETGGIKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E      +K LQ+KLL + +      D     I     RL R K+ ++ DDV        
Sbjct: 258 ENSAQNNLKHLQEKLLLKTTGLKIKLDHVCEGIPIIKERLCRNKILLILDDVDDMEQLHA 317

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L +    + Y ++ L   +A +L    AF  + + +S
Sbjct: 318 LAGGPDWFGHGSRVIITTRDKHLLTSHDIERTYAVEGLYGTEALELLRWMAFKNNKVPSS 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++ ++A+ YA G+PL L+++G  L G+S + W+  +   E IP+ +I E+LK+SYD+L
Sbjct: 378 YEDILNRAVSYASGLPLVLEIVGSNLFGKSIKEWKGTLDGYEKIPNKKIHEILKVSYDAL 437

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYR----- 412
           ++ Q++VFLDIAC  +G   +E   I                A KSLI +   Y      
Sbjct: 438 EEEQQSVFLDIACCFKGCGWEEFEDILHVHYGHCITHHLGVLAEKSLIKISTCYHSGSID 497

Query: 413 -IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            +R+HDL++DMG+E+VR+ES   P KR+RLW H+DI  V+K+N GT  IE I+++ + + 
Sbjct: 498 VVRVHDLIKDMGKEVVRQESPKDPEKRSRLWRHEDIVHVIKENIGTSKIEMINMNFHSME 557

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
             I     AF KM KLR L     +N      L+ +P + +  L+W  C  ++       
Sbjct: 558 SVIDQKGKAFKKMTKLRTLII---ENGHFSEGLKYLPSSLIV-LKWKGCLSES------- 606

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
                                      F+      + D + L  +PD   L+NLE  + K
Sbjct: 607 ------------------LSSSILSKNFQNMKVLTLDDNEYLTHIPDLSGLQNLEKFSFK 648

Query: 590 -GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
               +  +  S+G L+ ++RL     S LER P     L+ L  L +  C+ L++ P+L 
Sbjct: 649 YCENLITIDNSIGHLNKLERLSAFGCSKLERFPP--LGLASLKELNLCCCDSLKSFPKLL 706

Query: 649 CNLGLLSARNCTSLEKLPAG--LSSMSSV 675
           C    ++  +C  L   P G  LSS  ++
Sbjct: 707 CE---MTNIDCIWLNYTPIGELLSSFQNL 732



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 45/236 (19%)

Query: 522 LKTLNICA-EKLVSL-KMPC--TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           LK LN+C  + L S  K+ C  T ++ +W +   +   L +F+     + +  +    L 
Sbjct: 688 LKELNLCCCDSLKSFPKLLCEMTNIDCIWLNYTPIGELLSSFQNLSELDELSVRECGMLN 747

Query: 578 DELENLEYLTVKGTTIRELPESLGRLS----W---VKRLILSNNSNLERIPESIRHLSKL 630
           D++ ++ +  V   ++++   S   L     W   V+ L LSNN N + +PE +     L
Sbjct: 748 DKMYSIMFSNVTELSLKDCNLSDEYLQIVLKWCVNVEELELSNN-NFKILPECLSECHHL 806

Query: 631 TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE 690
             L +S+C  L+ +  +P NL  LSA  C SL      +     +       F+      
Sbjct: 807 KHLDLSYCTSLEEIRGIPPNLKELSAEGCKSLSSSSRRMLMSQQLHEAQWTYFV------ 860

Query: 691 LSEIVKDGWMKHSLYEERGIKKSMYFP-GNE-IPKWFRHQSMGSSATLKTRPPRPA 744
                                    FP G E IP WF HQS G + +   R   P+
Sbjct: 861 -------------------------FPNGTEGIPDWFEHQSKGPTISFWFRKEIPS 891


>gi|105922482|gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 262/778 (33%), Positives = 404/778 (51%), Gaps = 129/778 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +FT HL+  L  + + TF DDQ L RG+ IS+ LL  I+ S  ++I
Sbjct: 14  YDVFLSFRGEDTRKSFTDHLYTALCHRGVITFRDDQELERGNEISRELLQAIQDSRFSVI 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  Y SS W                      FY VDPS VR Q+    + F+   + F
Sbjct: 74  VFSRNYTSSTWCLNELVKIVECMKQGRQTVIPVFYDVDPSEVRNQTGRLQQAFADHEEVF 133

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN---KGL 153
               EK++ W+ A+   A+LSG+D    R ES+ I+ I  +++ +L  +  S +   + L
Sbjct: 134 KDNIEKVQTWRIAMKLVANLSGWDLQD-RHESEFIQGIVEEIVCKLRKSSYSMSWVTENL 192

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS---KITIAGAVFNKISRHFEGSYFALN 210
           VG++  +EE+   L +G E +  +R+ GI G+    K TIA AV+ K+  HFEGS F  N
Sbjct: 193 VGMDWRLEEMS--LYLGVEQLNDVRVIGICGMGGIGKTTIARAVYEKMLGHFEGSSFLAN 250

Query: 211 VREAEETGGIKDLQKKLLSE--LSKDGNMRNIESQLN----RLARKKVRIVFDDVT---- 260
           VRE EE  G+  LQ++LLS+  + +   + ++   +N    RL  + V +V DDV     
Sbjct: 251 VREVEEKHGLVRLQEQLLSDTLMDRRTKISDVHRGMNEIRVRLRSRMVLVVLDDVDQLVQ 310

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GSRVIITTRD+ +LK    +K YR+  L   +A +LFC  AF     
Sbjct: 311 LESLVGDRNWFDNGSRVIITTRDELLLKQFGVDKIYRVASLNNIEAVQLFCLKAFRSYCP 370

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              ++  T + +KYA G+PLAL VLG +  G RS E+W  ++++L+ IP   I + LKIS
Sbjct: 371 PEDYVLQTIQVVKYADGLPLALHVLGSFFSGIRSVELWNHSLKRLKDIPDKGILDKLKIS 430

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIR 414
           +D L++ +K +FLDIACF  G   D V  + ++S             K LIN+    R+ 
Sbjct: 431 FDGLNEVEKKIFLDIACFFNGWEEDCVTKLMESSGFYPQIGIRILVEKFLINIS-DNRVW 489

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT------------------- 455
           MHDLL++MGR+IV++ES   PGKR RLW  +D+  VL  NT                   
Sbjct: 490 MHDLLQEMGRQIVKRESHEEPGKRTRLWLCEDVIHVLLNNTVNNLLLQPQFYVSDFEFPF 549

Query: 456 -------------GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVS 502
                        GT+ +EGI L+ N     +++++ +  KM +LR L+         + 
Sbjct: 550 SCSSFLFINFTVQGTDKVEGIVLNSNDEVDGLYLSAESIMKMKRLRILKLQNINLSQEIK 609

Query: 503 HLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK 560
           +L      E+R+LEW + P K+L      +KLV L M  + ++QLW+   +L  ++    
Sbjct: 610 YLSN----ELRYLEWCRYPFKSLPSTFQPDKLVELHMRHSSIKQLWEGPLKLLRAI---- 661

Query: 561 TPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNL 617
                ++   + L + PD  ++ NLE L ++G   + ++ +S+G L  +  L L +   L
Sbjct: 662 -----DLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKL 716

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
             +P +I  L  L  L +  C +L+ LPE+   LG     N  +LE+L  G ++++ +
Sbjct: 717 ACLPTNICELKTLRILNLYGCFKLEKLPEM---LG-----NVINLEELDVGRTAITQL 766



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 21/162 (12%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP+ +     ++ L L  N N  RIP SI  LSKL  L + +C++LQ+LP+LP  L  L
Sbjct: 835 ELPDDMSCFPSLEELDLIGN-NFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEYL 893

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
               C SL  LP      +   +++L   + ++ +EL++   +  M              
Sbjct: 894 GVDGCASLGTLPNLFEECARSKFLSL---IFMNCSELTDYQGNISM-------------- 936

Query: 715 YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
              G+EIP WF H+S+G S T++  P      +K +  A CA
Sbjct: 937 ---GSEIPSWFHHKSVGHSLTIRLLPYEHWSSSKWMGLAVCA 975


>gi|227438245|gb|ACP30612.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 886

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 260/799 (32%), Positives = 395/799 (49%), Gaps = 120/799 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SFRGED R NF SH H  L LK   TF DD + R  +I   L   I  S I+I++
Sbjct: 22  YHVFSSFRGEDVRKNFLSHFHKELKLKGNDTFKDDGIKRSTSIWPELKQAIWESRISIVV 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YA S W                      FY VDPS VRKQ   FG+ F ++   R 
Sbjct: 82  LSMNYAGSSWCLNELVEIMECREVSGQTLMPIFYEVDPSDVRKQKGEFGKAFEKICAGRT 141

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+ +RW+ ALT    ++G  S+    ++++IE+I  DV + L+    SK+  GLVG+E 
Sbjct: 142 VEETQRWRQALTNVGSIAGECSSNWDNDAEMIEKIVADVSEELNRCTTSKDFDGLVGLEA 201

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISR----HFEGSYFALNVREA 214
            + ++ S+LC+ S  V  + IWG  GI K TIA A+++++S     +F+ + F  NV+ +
Sbjct: 202 HVAKLCSMLCLESNEVRMIGIWGPIGIGKTTIARALYSQLSAAADDNFQLNIFMENVKGS 261

Query: 215 ---EETGGIK---DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
               E  G      LQ++ LSE+   +D  + ++     RL  +K  IV DDV       
Sbjct: 262 CRRNELDGYSLKLHLQERFLSEIFNKRDIKISHLGVAQERLKNQKALIVLDDVDELQQLH 321

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +G+R+I+TT DKQ+LK    +  Y +      +A K+ C++AFG +    
Sbjct: 322 ALADQTQWFGNGTRIIVTTEDKQLLKAHGISHVYEVGFPSKDEAFKILCRYAFGQNSAPE 381

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              +L  +  + +  +PL+L VLG  L G SKE W  A+ +L    + +IE+VL + YDS
Sbjct: 382 GFYDLAVEVSQLSGNLPLSLSVLGASLRGVSKEEWTKALPRLRTSLNGKIEKVLGVCYDS 441

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY-----RIRMHD 417
           LD+  + +FL IAC   GE  + VI     S        K L++  L +      I MH 
Sbjct: 442 LDEKDRLIFLHIACLFNGEKVERVIQFLAKSELEVEFGLKVLVDRSLLHICDDGNIVMHC 501

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL+ MG+EI+R + I+ PGKR  L   KDI  VL   TGTE + GISLDM+K+N ++ ++
Sbjct: 502 LLQQMGKEIIRGQCIDEPGKRKFLVDAKDISDVLVDATGTETVLGISLDMSKINDDVCIS 561

Query: 478 SYAFSKMPKLRFLRFYGDKNK-----CMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
             AF +M  L+FLR Y +        C+   L+ +P  ++R L W   P+K +      E
Sbjct: 562 EKAFDRMHNLQFLRLYTNFQDESFKLCLPHGLDRLPH-KLRLLHWDSYPIKCMPSRFRPE 620

Query: 531 KLVSLKMPCTKVEQLWDDVQRL-------------------------------------- 552
            LV L M  +K+E+LW+ +Q L                                      
Sbjct: 621 FLVELSMRDSKLEKLWEGIQPLTSLKQMDLSASTKIKDIPNLSKATNLEKLYLRFCKALA 680

Query: 553 --PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVK 607
             PSSL         ++  C  L  LP    LE+L  L +KG + +R  PE    +S   
Sbjct: 681 SVPSSLQNLNKLKVLDMSSCVRLNALPTNMNLESLSVLNMKGCSKLRIFPE----ISSQV 736

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
           + +    + +E +P SI    +L  L +S C++L+T P+LP ++ +L   + T +E++P 
Sbjct: 737 KFMSVGETAIEEVPLSISLWPQLISLEMSGCKKLKTFPKLPASVEVLDLSS-TGIEEIPW 795

Query: 668 GLSSMSSVLYVNLCNFLKL 686
           G+ + S +L + + N  KL
Sbjct: 796 GIENASQLLIMCMANCKKL 814



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 48/96 (50%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
           ++ +P S+  +   I+ E+  CK L+  P    ++E L +  T I E+P  +   S +  
Sbjct: 746 IEEVPLSISLWPQLISLEMSGCKKLKTFPKLPASVEVLDLSSTGIEEIPWGIENASQLLI 805

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           + ++N   L+ +P SI  +  L  + +S C  L+ L
Sbjct: 806 MCMANCKKLKCVPPSIYKMKHLEDVDLSGCSELRPL 841


>gi|357499505|ref|XP_003620041.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495056|gb|AES76259.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 861

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 271/844 (32%), Positives = 417/844 (49%), Gaps = 135/844 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD  L RG+ I+ SLL  IE S I I 
Sbjct: 18  YQVFLSFRGSDTRYGFTGNLYKALTDKGINTFIDDNGLQRGNEITPSLLKAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      F+ VDPSHVR    S+G   +   KRF
Sbjct: 78  VFSINYASSSFCLDELDHIIHCYKTKGRPVLPVFFGVDPSHVRHHKGSYGEALAEHEKRF 137

Query: 100 ---PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
              P+ M+R   WK+AL++AA+LSG+  +    E KLI +I   +  ++     +     
Sbjct: 138 QNDPKNMERLQGWKDALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISRQPLNVATYP 197

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  +++++SLL  GS+ GV  + I+GIGG+ K T+A A++N I+  FE S F  NV+
Sbjct: 198 VGLQSRVQQVKSLLDEGSDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLENVK 257

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E+  +  +K+LQ++LL      E+        I     RL  KK+ ++ DDV        
Sbjct: 258 ESSASNNLKNLQQELLLKTLQLEIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQLDA 317

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L      K Y ++EL   +A +L    AF  + + +S
Sbjct: 318 LAGGLDWFGPGSRVIITTRDKHLLDCHGIEKTYAVEELNGTEALELLRWKAFKNEKVPSS 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++  +A+ YA G+PLA++V+G  L G+S    ES + K   IPH +I+++L++SYD+L
Sbjct: 378 YEDILKRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILRLSYDAL 437

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLF----YRI 413
           ++ +++VFLDIAC ++G   ++V  I  A               KSLIN+        ++
Sbjct: 438 EEEEQSVFLDIACCIKGCRLEKVKQILHAHYGYSIESHIGVLVDKSLINISWCCFSGIKV 497

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            +H+L+  MG+E+VR+ES   PG+R+RLW   DI  VLK+NTGT   E I ++++ +   
Sbjct: 498 TLHELIEVMGKEVVRQESPKEPGERSRLWSQDDIVHVLKENTGTGKTEMICMNLHSMESV 557

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLV 533
           I     AF KM +L+ L          + +L     + ++ L+W  C  K+L+       
Sbjct: 558 IDKKGKAFKKMTRLKTLIIENGHCSKGLKYLR----SSLKALKWEGCLSKSLSSSILSKK 613

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID-CKMLERLPD--ELENLEYLTVK- 589
              M                          T  I+D C+ L  +PD   L NLE L+ + 
Sbjct: 614 FQDM--------------------------TILILDHCEYLTHIPDVSGLSNLEKLSFEY 647

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
              +  +  S+G L+ ++RL       L+R P     L+ L  L +S C  L++ P+L C
Sbjct: 648 CKNLITIHNSIGHLNKLERLSAFGCRTLKRFPP--LGLASLKELKLSCCYSLKSFPKLLC 705

Query: 650 NLGLLSAR--NCTSLEKLPAGLSSMSSV---------LYVNLCNFLKLD-----PNELSE 693
            +  +       TS+ +LP+   ++S +         +++NL +   L+     P  L  
Sbjct: 706 KMTNIDKIWFWYTSIRELPSSFQNLSELDELSVREFGIHINLYDCKSLEEIRGIPPNLEV 765

Query: 694 IVKDG-----------WMKHSLYEERGIKKSMYFP-GNE-IPKWFRHQSMGSSATLKTRP 740
           +   G            M   L+E R      YFP G E IP WF HQS G + +   R 
Sbjct: 766 VDAYGCESLSSSSRRMLMNQELHEARCT--YFYFPNGTEGIPDWFEHQSRGDTISFWFRK 823

Query: 741 PRPA 744
             P+
Sbjct: 824 EIPS 827


>gi|227438267|gb|ACP30623.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1262

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 247/746 (33%), Positives = 375/746 (50%), Gaps = 99/746 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGED R  F SH+   L  K I  F+DD++ RG+++   L+G I  S +A+++
Sbjct: 13  YDVFLSFRGEDVRKGFLSHVRKGLERKGIIAFVDDKIERGESVGPVLVGAIRQSRVAVVL 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S  YASS W                      FY VDPSHVRKQ+  FG+ F +      
Sbjct: 73  LSRNYASSSWCLDELVEIMKCRKEDQQKVMTIFYEVDPSHVRKQTGDFGKAFEKTCMGKT 132

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K+ W+ AL + A ++G+ S+    E+++I+++A+DV   L  T        VGV   
Sbjct: 133 EEVKQEWRQALEDVAGIAGYHSSNSDNEAEMIDKVASDVTAVLGFTPSKDFDDFVGVVAQ 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I EI+S L + SE V  + + G  GI K T A  ++N++S  F  S F  N+R + E   
Sbjct: 193 ITEIKSKLILQSEQVKMIVLVGPAGIGKTTTATVLYNQLSPGFPFSTFLENIRGSYEKPC 252

Query: 220 IKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
             D      LQKK+LS++    D  + ++     +L+ K+V +V D+V S          
Sbjct: 253 GNDYQLKLRLQKKMLSQIFNQSDIEVGHLRVAQEKLSDKQVLVVLDEVDSWWQLEATAYQ 312

Query: 262 ------GSRVIITTRDKQVLKNC--WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                 GS +IITT D+++LK      +  Y MK     ++ ++FCQ+AFG D       
Sbjct: 313 RGWFGPGSIIIITTEDRKLLKTLRLGIDHIYEMKFPTSDESLQIFCQYAFGQDSPYDGFE 372

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL  +    A  +PL L+V+G YL G S+E W  A+ +L      EIE  L+ SYD L D
Sbjct: 373 ELAREVTWLAGNLPLGLRVMGSYLRGMSREQWIDALPRLRSSLDREIESTLRFSYDGLSD 432

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASK-------------SLINLDLFYRIRMHDLLR 420
             K +FL IACF +    + V S    SK             SLI+++  Y ++MH LL+
Sbjct: 433 KDKALFLHIACFFQYFKVESVKSCLKKSKLDVNHGIQVLADRSLISIEGGY-VKMHSLLQ 491

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM-----NKVNREIH 475
            MGR IV+KES+  PGKR  LW   +I ++L KNTGT  +  +SL       N    +I 
Sbjct: 492 KMGRGIVKKESLKEPGKREFLWSTSEIIELLDKNTGTGNVIALSLRTYENSENSKRGKIQ 551

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLV 533
           ++  AF +M  L+FL+   D N  +   L  +P  ++R + W  CPL+       A+ LV
Sbjct: 552 ISKSAFDEMNNLQFLKVKSD-NVRIPEGLNCLP-EKLRLIHWDNCPLRFWPSKFSAKFLV 609

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLTV 588
            L MP +K E+LW+ ++ L             +++D +    L+ +PD  +  +LE L +
Sbjct: 610 ELIMPISKFEKLWEGIKPL----------YCLKLMDLRNSLYLKEIPDLSKATSLEKLDL 659

Query: 589 KGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
               ++ EL  S+G  S ++   LS    L+ +P S+  L  L  L +SHC         
Sbjct: 660 TDCESLLELTSSIGNASKLRVCNLSYCRLLKELPSSMGRLINLEELNLSHC--------- 710

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMS 673
              +GL      ++L+KL  G S ++
Sbjct: 711 ---VGLKEFSGYSTLKKLDLGYSMVA 733



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 35/244 (14%)

Query: 620  IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
            IP  IR L  L+ L I+ C  L  LP LP +L  +      SLE + +     SS    +
Sbjct: 898  IPYCIRSLRGLSKLDITQCRNLVALPPLPGSLLSIVGHGYRSLESIDS-----SSFQNPD 952

Query: 680  LCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTR 739
            +C  LK          +D  ++  L E    K ++   G ++P  F HQ+     T+   
Sbjct: 953  IC--LKF----AGSFSRDQAVRR-LIETSACKYALLL-GRKVPADFTHQATSGCLTINMS 1004

Query: 740  P-PRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSW 798
            P P P+      SF F A ++          + GE+   G +Y   C    K  GH   +
Sbjct: 1005 PTPLPS------SFRFKACILLT------NDEEGENSLRGGIY---CLVSGKQNGHTVQY 1049

Query: 799  FLGKISYV-----ESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCG 853
               ++ Y+     +++H+++  +SF         +E +F     F F  + +  +VK CG
Sbjct: 1050 GSNQVHYMPDLYGQAEHLYIFEDSFSLNQDYSEAEEATFS-ELLFEFRVHKKAWKVKGCG 1108

Query: 854  IHFV 857
            +  +
Sbjct: 1109 VRLL 1112


>gi|356542401|ref|XP_003539655.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1014

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 259/765 (33%), Positives = 402/765 (52%), Gaps = 109/765 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF G DTR +FT +L++ L  + I  FIDD+ L RG+ I+ +LL  I  S I II
Sbjct: 18  YDVFLSFSGIDTRHSFTDNLYNSLKQRGIHAFIDDEGLRRGEEITPTLLKAIRESRIGII 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY VDPS VR Q+ ++    ++ ++RF
Sbjct: 78  VFSKSYASSTYCLDELVEILECLKVEGRLVWPVFYDVDPSQVRYQTGTYAEALAKHKERF 137

Query: 100 PE---KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   K+++W+ AL EAA+LSG+   +    E K I++I ++  K+++ T        VG
Sbjct: 138 QDDKGKVQKWRKALHEAANLSGWHFQHGSESEYKFIKKIVDEASKKINRTPLHVADNPVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           +E S+ E+ SLL  GSE V  + I+GIGGI K T+A A +N I+  FEG  F  ++RE A
Sbjct: 198 LESSVLEVMSLLGSGSE-VSMVGIYGIGGIGKTTVARAAYNMIADQFEGLCFLADIREKA 256

Query: 215 EETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT-------- 260
                +  LQ+ LLS++  + ++      R I     RL +KKV ++ DDV         
Sbjct: 257 ISKHRLVQLQETLLSDILGEKDIKVGDVSRGIPIIERRLRKKKVLLILDDVDKLVQLQVL 316

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGS++IITTRDK++L      K + +K+L    A +LF   AF  +  D S+
Sbjct: 317 AGGYCWFGSGSKIIITTRDKKLLATHGVVKLHEVKQLNDEKAFELFSWHAFKRNKFDPSY 376

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +++ ++A+ YA G+PLAL+V+G +L G+S +   SA+ K E IPH  I ++LK+SYD L+
Sbjct: 377 VDILNRAVFYACGLPLALEVIGSHLFGKSLDECNSALDKYERIPHRGIHDILKVSYDGLE 436

Query: 373 DSQKNVFLDIACFLE--------------GEHRDEVISIFDASKSLINLDLFYRIRMHDL 418
           + +K +FLDIACF                G H ++ I +  + KSLI +D    ++MHDL
Sbjct: 437 EDEKGIFLDIACFFNTCNMRFVKQMLHARGFHAEDGIRVL-SDKSLIKIDESGCVKMHDL 495

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           ++ MGREIVR+ES   P KR+RLW  +DI +VL++N GT+ IE I L++    +E+  + 
Sbjct: 496 IQHMGREIVRQESKLKPRKRSRLWLDEDIVRVLEENKGTDKIEAIMLNVRD-KKEVQWSG 554

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEW--PQCPLKTLNICAEKLVSLK 536
            AF KM  L+ L   G   + + S +       +R LEW     P    +   ++L  L 
Sbjct: 555 KAFKKMKNLKILVIIG---QAIFSSIPQHLPNSLRVLEWSSYPSPSLPPDFNPKELEILN 611

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           MP + +E  +  ++R       F++ I+    DCK L  L                    
Sbjct: 612 MPQSCLE-FFQPLKR-------FESLISVNFEDCKFLTEL-------------------- 643

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC----NLG 652
             SL  + +++ L L N +NL ++ +S+  L  L FL    C +L+ L  +PC    +L 
Sbjct: 644 -HSLCEVPFLRHLSLDNCTNLIKVHDSVGFLDNLLFLSAIGCTQLEIL--VPCIKLESLE 700

Query: 653 LLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIV 695
            L    C  L+  P  +  M  +  +Y++     KL P+ +  +V
Sbjct: 701 FLDLTECFRLKSFPEVVGKMDKIKDVYLDKTGITKL-PHSIGNLV 744


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 267/889 (30%), Positives = 429/889 (48%), Gaps = 177/889 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR  FT  L+  L  K ++ F D++ L RGD I + LL  IE S   I 
Sbjct: 21  WDVFLSFRGEDTRGTFTDCLYTRLQHKGVRAFRDNEGLNRGDKIDRCLLDAIEDSAAFIA 80

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK- 102
           I S  YA+SRW                  FY VDPSHVR Q   F +HF  L  RF E+ 
Sbjct: 81  IISPNYANSRWCLEELAKVCECNRLILPVFYNVDPSHVRGQRGPFLQHFKDLEARFGEED 140

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           + +W+ A+     L+GF  N    E+ +I+ + N+VL  L + +       VG++  +EE
Sbjct: 141 VSKWRKAMKYVGGLAGFVVNGFGDEADVIQTLLNNVLAEL-SKWSGVAAFTVGLDSRVEE 199

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIK 221
           +  LL + S  +  L ++G GG+ K T+A A++NK+  HFE   F  NV++   +  G+ 
Sbjct: 200 VLELLDLKSNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYLAQENGLL 259

Query: 222 DLQKKLLSELSKDGNMRN-IESQL----NRLARKKVRIVFDDVTS--------------- 261
            LQ KL+ +LS   +  N + + L    + +  K+V I+ DDV                 
Sbjct: 260 SLQIKLIGDLSGMASHVNEVNAGLVAIKSIVQEKRVLIILDDVDDASQLTAIAGRKKWRK 319

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRD++VL     N+ Y +K+L   ++ +LF  +A G       ++ L+ 
Sbjct: 320 WFYEGSRIIITTRDREVLHELHENELYEVKQLNSPESLQLFSHYALGRVKPTPDYLPLSK 379

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSK-EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           + +    G+PLAL+V G  L  + K E WE A++KL+ I  ++++ VLKISYD LD+ +K
Sbjct: 380 QIVSLTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQIRPMDLQGVLKISYDGLDEQEK 439

Query: 377 NVFLDIACFL--EGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
            VFLDIAC     G  +++ I I                 KSL+ +   Y + MHD LRD
Sbjct: 440 CVFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYTLWMHDQLRD 499

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM-------------- 467
           MGR+IV  E+    G R+RLW   +I +VL+ N G+  I+G+ LD               
Sbjct: 500 MGRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIFMKDSAAAWG 559

Query: 468 --------------------------NKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV 501
                                      +  RE+ + + +F  M  LR L+     N  + 
Sbjct: 560 RFRGTPNFTTAVTWLKETYKEYFQHAAEKERELILQTKSFESMINLRLLQI---DNVQLE 616

Query: 502 SHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK-VEQLWDD---------- 548
              + +P AE++ L+W  CPLKTL  + C + L  L +  +K +E+LW +          
Sbjct: 617 GEFKLMP-AELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIERLWGESWVGENLMVM 675

Query: 549 ------------------------------VQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
                                         + ++  S+    + +  ++ +CK L   P 
Sbjct: 676 NLHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPS 735

Query: 579 E---LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
           +   L+NL+ L + G + ++ELPE++  +  ++ L+L + + +E++PES+  L++L  L 
Sbjct: 736 DVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLL-DGTVIEKLPESVLRLTRLERLS 794

Query: 635 ISHCERLQTLPELPCNLGLLSAR----NCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
           +++C+ L+ LP   C   L S R    N ++LE++P    S++++  ++L  C  +   P
Sbjct: 795 LNNCQSLKQLPT--CIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIP 852

Query: 689 NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
           + +  +         L  E  +  S   P NE+P      S+GS + LK
Sbjct: 853 DSVRNL--------KLLTEFLMNGS---PVNELP-----ASIGSLSNLK 885



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+   +LS ++ L L  N N   +P S+R LS L  L + HCE L+ LP LP +L  +
Sbjct: 1084 KIPDDFDKLSSLEILNLGRN-NFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEV 1142

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK-------DGWMKHSLYEE 707
            +A NC +LE + + LS++ S+  +NL N  KL      E +K        G    S   +
Sbjct: 1143 NAANCYALEVI-SDLSNLESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVK 1201

Query: 708  RGIKK-------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF 760
            R + K       ++  PG+ IP WF      + A    R       N +I      VVV 
Sbjct: 1202 RRLSKVALKNLRTLSIPGSNIPDWFSR----NVAIFSKRK------NLVIKAVIIGVVV- 1250

Query: 761  PAFLKYFRHKSGEDDWDG--NVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSF 818
               L +       D       + A      R+  G +    L  +   + DH++L C   
Sbjct: 1251 --SLSHHIQDELRDQLPSVPGIEAKILRMNRQVFGTMLD--LTGVPKTDEDHLYL-C--- 1302

Query: 819  GGEYFGPNYDEF---------SFRIHCSFHFPPYLERGEVKKCGIHFVY 858
                    Y EF           +I  +   PP ++  E+KK GIH ++
Sbjct: 1303 -------RYREFHPIVSMLKDGDKIQVTMRNPPMVKGVELKKSGIHLIF 1344



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 30/166 (18%)

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSWVKRL 609
           PS +   K   T  +  C  L+ LP+    +++L  L + GT I +LPES+ RL+ ++RL
Sbjct: 734 PSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERL 793

Query: 610 ILS-----------------------NNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            L+                       N+S LE IP+S   L+ L  L +  C+ +  +P+
Sbjct: 794 SLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPD 853

Query: 647 LPCNLGLLSA--RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDP 688
              NL LL+    N + + +LPA + S+S++  L V  C FL   P
Sbjct: 854 SVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHCRFLSKLP 899



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 13/141 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           +++LP S+          + +C+ L++LP    +LE+L  L+   + + E+P+S G L+ 
Sbjct: 777 IEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTN 836

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL------LSARNC 659
           ++RL L    ++  IP+S+R+L  LT   ++       + ELP ++G       LS  +C
Sbjct: 837 LERLSLMRCQSIYAIPDSVRNLKLLTEFLMNG----SPVNELPASIGSLSNLKDLSVGHC 892

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
             L KLPA +  ++S++ + L
Sbjct: 893 RFLSKLPASIEGLASMVVLQL 913



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 13/141 (9%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPESLGRLSW 605
            V  LP+S+ +        +  C+ L +LP  +E L  + V    GT+I +LP+ +G L  
Sbjct: 871  VNELPASIGSLSNLKDLSVGHCRFLSKLPASIEGLASMVVLQLDGTSIMDLPDQIGGLKT 930

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
            ++RL +     LE +PE+I  +  L  L I        + ELP ++G      +L+   C
Sbjct: 931  LRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDA----PMTELPESIGKLENLIMLNLNKC 986

Query: 660  TSLEKLPAGLSSMSSVLYVNL 680
              L +LP  + ++ S+ ++ +
Sbjct: 987  KRLRRLPGSIGNLKSLHHLKM 1007



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLGRLSW 605
            +  LP S+   +  I   +  CK L RLP  + NL+   +L ++ T +R+LPES G L+ 
Sbjct: 965  MTELPESIGKLENLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEETAVRQLPESFGMLTS 1024

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL---LSARNCTSL 662
            + RL+++   +LE +P+++   ++   L       L  LP    NL L   L AR     
Sbjct: 1025 LMRLLMAKRPHLE-LPQALGP-TETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKIS 1082

Query: 663  EKLPAGLSSMSSVLYVNL 680
             K+P     +SS+  +NL
Sbjct: 1083 GKIPDDFDKLSSLEILNL 1100


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 243/789 (30%), Positives = 398/789 (50%), Gaps = 112/789 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF---IDDQLIRGDNISQSLLGTIEASCIA 58
           YDVFLS R +DT  +F + LH  L+ + I  F   +D++        +  +  +E S  +
Sbjct: 38  YDVFLSHRAKDTGQSFAADLHEALTSQGIVVFRDDVDEEDGEKPYGVEEKMKAVEESRSS 97

Query: 59  IIIFSERYAS--------------------SRWFFYRVDPSHVRKQSHSFGRHFSRLR-- 96
           I++FSE Y S                        FY++DP +VRKQ  +F ++F+     
Sbjct: 98  IVVFSENYGSFVCMKEVGKIAMCKELMDQLVLPIFYKIDPGNVRKQEGNFEKYFNEHEAN 157

Query: 97  -KRFPEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            K   E+++ W+ ++ +   LSG+   +    E  +I+E+   +  +L       +  LV
Sbjct: 158 PKIDIEEVENWRYSMNQVGHLSGWHVQDSQSEEGSIIDEVVKHIFNKLRPDLFRYDDKLV 217

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+   + +I  LL IG + V  + IWG+GGI K T+A  ++  +S  F+G YF  NV+EA
Sbjct: 218 GITPRLHQINMLLGIGLDDVRFVGIWGMGGIGKTTLARIIYKSVSHLFDGCYFLDNVKEA 277

Query: 215 EETGGIKDLQKKLLSE--LSKDGNMRNIESQL---NRLARKKVRIVFDDVT--------- 260
            +   I  LQ+KL++   + ++ ++ N +       R+++ K  I+ DDV          
Sbjct: 278 LKKEDIASLQQKLITGTLMKRNIDIPNADGATLIKRRISKIKALIILDDVNHLSQLQKLA 337

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGSRVI+TTRD+ +L +    ++Y ++ L   +  +LF Q AFG +H    + 
Sbjct: 338 GGLDWFGSGSRVIVTTRDEHLLISHGIERRYNVEVLKIEEGLQLFSQKAFGEEHPKEEYF 397

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L  + + YA G+PLA++VLG  L  +  E W +A+ KL  +   EI E LKISY  L++
Sbjct: 398 DLCSQVVNYAGGLPLAIEVLGSSLHNKPMEDWINAVEKLWEVRDKEIIEKLKISYYMLEE 457

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA--SKSLINLDLFY----------RIRMHDLLRD 421
           S++ +FLDIACF + + +++ I I ++    +++ L++            ++++HDL+++
Sbjct: 458 SEQKIFLDIACFFKRKSKNQAIEILESFGFPAVLGLEILEEKCLITAPHDKLQIHDLIQE 517

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+EIVR    N P KR RLW  +DI   L ++ GTEAIEGI +D ++   E H+N+ AF
Sbjct: 518 MGQEIVRHTFPNEPEKRTRLWLREDINLALSRDQGTEAIEGIMMDFDE-EGESHLNAKAF 576

Query: 482 SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPC 539
           S M  LR L+     N  +   +E +   ++R L W   PLKTL  N     L+ L++P 
Sbjct: 577 SSMTNLRVLKL---NNVHLCEEIEYLS-DQLRFLNWHGYPLKTLPSNFNPTNLLELELPN 632

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEII---DCKMLERLPD--ELENLEYLTVKG-TTI 593
           + +  LW           T K+  T ++I   D + L + PD   + NLE L + G   +
Sbjct: 633 SSIHLLW----------TTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVEL 682

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG- 652
            +L  SLG L  + +L L N   L  IP +I  L  L  L +S C  L   P++  N+  
Sbjct: 683 HQLHHSLGNLKHLIQLDLRNCKKLTNIPFNI-CLESLKILVLSGCSSLTHFPKISSNMNY 741

Query: 653 -------------------------LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLK 685
                                    +L+ +NCT+L KLP+ + S++S+  +NL  C+ L 
Sbjct: 742 LLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSELD 801

Query: 686 LDPNELSEI 694
             P  L  I
Sbjct: 802 SLPESLGNI 810


>gi|356558276|ref|XP_003547433.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1106

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 259/786 (32%), Positives = 398/786 (50%), Gaps = 117/786 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG+D RD F SHL      K I  F+D+  L +GD I  SL   IE S I++I
Sbjct: 11  YDVFVSFRGKDIRDGFLSHLTDTFLRKKINVFVDETNLKKGDEIWPSLAVAIEVSSISLI 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YASSRW                      FY V P +VR Q  S+   F++  +++
Sbjct: 71  IFSQDYASSRWCLEELVKILECREKYGRIVIPIFYHVQPKNVRHQLGSYENIFAQRGRKY 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K++ WK+AL  +ADLSG +S+  + +++LI+EI N VL +L A     +KG+VG++  
Sbjct: 131 KTKVQIWKDALNISADLSGVESSRFQNDAELIQEIVNVVLNKL-AKPSVNSKGIVGIDEE 189

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I  +E L+    +    + IWG+GGI K T+A  V NK+   FEG YF  N RE     G
Sbjct: 190 IANVELLISKEPKKTRLIGIWGMGGIGKSTLAEKVLNKLRSGFEGCYFLANEREQSNRHG 249

Query: 220 IKDLQKKLLSEL-SKDGNMRNI----ESQLNRLARKKVRIVFDDVT-------------- 260
           +  L++K+ SEL   D  +  +    E  + R++  KV ++ DDV               
Sbjct: 250 LISLKEKIFSELLGYDVKIDTLYSLPEDIVRRISCMKVLLILDDVNDLDHLEKLLGTLDN 309

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+TTRD+QVLK    ++ YR++E  +  A + F    F        +  L++K
Sbjct: 310 FGSGSRIIVTTRDEQVLKANKVDEIYRLREFNHDKALEFFNLNTFNQSDDQREYSTLSEK 369

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YA+G+PL LKVL   L GR KE+WES + KL  +P   + + +K+SYD LD  ++ +
Sbjct: 370 VVDYARGIPLVLKVLAHLLRGRKKEIWESELDKLRRMPPTTVYDAMKLSYDDLDRKEQQL 429

Query: 379 FLDIACFL-----------------EGEHRDEVISIFD--ASKSLINLDLFYRIRMHDLL 419
           FLD+ACF                  +GE  + V+   +    K+LI +     I MHD L
Sbjct: 430 FLDLACFFLRSHIIVNVSNVKSLLKDGESDNSVVVGLERLKDKALITISEDNCISMHDCL 489

Query: 420 RDMGREIVRKESINHPGKRNRLWH-HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           ++M  EIVR+E    P  R+ LW  + DIY+ L+ +  TEAI  I + +    +   +  
Sbjct: 490 QEMAWEIVRRED---PESRSWLWDPNDDIYEALENDKCTEAIRSIRIHLPTFKKH-KLCR 545

Query: 479 YAFSKMPKLRFLRFYGDKN---KCMVSH---LEGVPF--AEVRHLEWPQCPLKTL--NIC 528
           + F+KM +L+FL   G+      C   H    EG+ F   E++ L W   PLK L  N  
Sbjct: 546 HIFAKMRRLQFLETSGEYRYNFDCFDQHDILAEGLQFLATELKFLCWYYYPLKLLPENFS 605

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            EKLV L MP  ++E+LW  V+ L          +  + +D    +ML+ LPD  +  NL
Sbjct: 606 PEKLVILNMPGGRIEKLWHGVKNL----------VNLKQLDLGWSQMLKELPDLSKARNL 655

Query: 584 EYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE--- 639
           E L + G + +  +  S+  L  +++L L N  +L R+     HL  L +L + +C+   
Sbjct: 656 EVLLLGGCSMLSSVHPSIFSLPKLEKLDLWNCRSLTRLASDC-HLCSLCYLNLDYCKNLT 714

Query: 640 --------------RLQTLPELPCNLGLLSARNC-----TSLEKLPAGLSSMSSVLYVNL 680
                         R   +  LP   G  S         +++E+LPA +++++ +L++ +
Sbjct: 715 EFSLISENMKELGLRFTKVKALPSTFGCQSKLKSLHLKGSAIERLPASINNLTQLLHLEV 774

Query: 681 CNFLKL 686
               KL
Sbjct: 775 SRCRKL 780



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 53/274 (19%)

Query: 528  CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLE---RLPDELENLE 584
            C  KL SL +  + +E       RLP+S+      +  E+  C+ L+    LP  LE L+
Sbjct: 742  CQSKLKSLHLKGSAIE-------RLPASINNLTQLLHLEVSRCRKLQTIAELPMFLETLD 794

Query: 585  -YLTVKGTTIRELPESLGRLS--------WVKRLILSNNSNLERIPESIRHLSKLT---- 631
             Y      T++ELP  L  L+         +  L LS  +   +  +S++ L KL     
Sbjct: 795  VYFCTSLRTLQELPPFLKTLNVKDCKSLQTLAELPLSLKTLNVKECKSLQTLPKLPPLLE 854

Query: 632  FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM-------SSVLYVNL---- 680
             L++  C  LQTLPELPC +  L A  CTSL+ +    +++       + VL++N     
Sbjct: 855  TLYVRKCTSLQTLPELPCFVKTLYAIYCTSLKTVLFPSTAVEQLKENRTRVLFLNCLKLD 914

Query: 681  ------------CNFLKLDPNELSEIVKDGWMKHSLYE----ERGIKKSMYFPGNEIPKW 724
                         N +K     LS    D    ++ Y+        +    +PG+ +P+W
Sbjct: 915  EHSLEAIGLTAQINVMKFANQHLSTPNHDHVENYNDYDYGDNHHSYQAVYLYPGSSVPEW 974

Query: 725  FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
              +++      +       A Y+ L+SF FC V+
Sbjct: 975  MEYKTTKDYINIDL---SSAPYSPLLSFIFCFVL 1005



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 4/107 (3%)

Query: 570 CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           CK L       EN++ L ++ T ++ LP + G  S +K L L   S +ER+P SI +L++
Sbjct: 710 CKNLTEFSLISENMKELGLRFTKVKALPSTFGCQSKLKSLHLKG-SAIERLPASINNLTQ 768

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSARNCTS---LEKLPAGLSSMS 673
           L  L +S C +LQT+ ELP  L  L    CTS   L++LP  L +++
Sbjct: 769 LLHLEVSRCRKLQTIAELPMFLETLDVYFCTSLRTLQELPPFLKTLN 815


>gi|297801410|ref|XP_002868589.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314425|gb|EFH44848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 262/883 (29%), Positives = 414/883 (46%), Gaps = 166/883 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH+  + K I TF D ++ RG  I   L+  I  S I++++
Sbjct: 11  YHVFPSFHGPDVRRGFLSHLHNHFTSKGITTFKDQEIERGQTIGPELVQAIRESRISVVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ Y SS W                      FY +D S VRKQS  FGR F R  +   
Sbjct: 71  LSKSYGSSSWCLDELVEILRCKEDQGQIVMTIFYEIDTSDVRKQSGDFGRDFKRTCEGKT 130

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW  AL   A ++G        E+ ++++ A DV  +L+ T      G+VG+E  
Sbjct: 131 EEVKQRWIQALAHVATIAGEHLLNWDNEAAMVQKFATDVSNKLNLTLSRDFDGMVGMETH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR-EAEETG 218
           + ++ SLLC+  + V  + IWG  GI K TIA  +FN++S  F    F  N++ + +   
Sbjct: 191 LRKLNSLLCLECDEVKMIGIWGPAGIGKTTIARTLFNQLSTSFRFICFMGNLKGKYKSVV 250

Query: 219 GIKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT---------- 260
           G+ D      LQ +LLS++    +MR  N+ +    L  ++V I+ DDV           
Sbjct: 251 GMDDYDSKLCLQNQLLSKILGQRDMRVHNLGAIKEWLQDQRVLIILDDVDDIEKLEALAK 310

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSR+I+TT DK++LK  W ++ Y +      +A ++ C  AF    +    +E
Sbjct: 311 EPSWFGSGSRIIVTTEDKKILKAHWVDRFYLVDFPSEEEALEILCLSAFKQSTVRDGFME 370

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L +K +++   +PL L V+G  L G SK  WE  + ++      +IE+VL++ YD L   
Sbjct: 371 LANKIVEFCGYLPLGLSVVGSSLRGESKHEWELQLSRIGTSLDRKIEDVLRVGYDKLSKK 430

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLF---YRIRMHDLLRDMG 423
            +++FL IACF   +  D V ++   S        K+L+   L    + I MH LL  +G
Sbjct: 431 DQSLFLHIACFFNSKKFDHVTTLLADSNLDVSNGLKTLVEKSLISICWWIEMHRLLEQLG 490

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           R+IV ++S + PGKR  L   ++I  VL+  TGT ++ GIS DM+K N ++ ++  AF  
Sbjct: 491 RQIVIEQS-DEPGKRQFLVEAEEIRDVLENETGTGSVIGISFDMSK-NVKLSISKRAFEG 548

Query: 484 MPKLRFLRFY------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           M  L+FLRFY      G+ +  ++  ++ +P   +R L+W   P K L      E L+ L
Sbjct: 549 MRNLKFLRFYKADFCPGNVSLRILEDIDYLP--RLRLLDWYAYPGKRLPPTFQPEYLIEL 606

Query: 536 KMPCTKVEQLWDDVQ----------------------------------------RLPSS 555
            M  +K+E+LW+ +Q                                        +LPSS
Sbjct: 607 HMKFSKLEKLWEGIQPLKNLKEIDLSFSYKLKEIPDLSNASKLKILTLSYCTSLVKLPSS 666

Query: 556 LCTFK-----------------TPI---TFEIID---CKMLERLPDELENLEYLTVKGTT 592
           +   +                 T I   + E +D   C +L   PD   N++ L V  T 
Sbjct: 667 ISNLQKLKKLNVSSCEKLKVIPTNINLASLEEVDMSFCSLLRSFPDISRNIKKLNVVSTQ 726

Query: 593 IRE-LPESLGRLSWVKRLILS-------------------NNSNLERIPESIRHLSKLTF 632
           I +  P S  RLS ++ L +                    ++S +E+IP+ +  L +L  
Sbjct: 727 IEKGSPSSFRRLSCLEELFIGGRSLERLTHVPVSLKKLDISHSGIEKIPDCVLGLQQLQS 786

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           L +  C +L +L  LP +L  L+A+NC SLE++    S    +  +   N LKLD     
Sbjct: 787 LIVESCTKLVSLTSLPPSLVSLNAKNCVSLERVCC--SFQDPIKDLRFYNCLKLDEE--- 841

Query: 693 EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSAT 735
                   + ++  +RG    +  PG E+P  F H+++G+S T
Sbjct: 842 -------ARRAIIHQRG-DWDVCLPGKEVPAEFTHKAIGNSIT 876



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 13/156 (8%)

Query: 226  KLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYR 285
            ++L E S DG+ + +E          V I+ D+  S S V  T  +     + W+   + 
Sbjct: 958  EILFEFSCDGSQQVMEC--------GVHILRDEAASSSEVGNTNNEDDW--SLWSCGNFP 1007

Query: 286  MKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVW 345
             KE        +FC  AF          ELT K  +    +PL L V+   L G SK  W
Sbjct: 1008 SKEEALL---TIFCLSAFTQSSPQDGFEELTKKVAELCGNLPLGLYVVDLSLRGESKHEW 1064

Query: 346  ESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
            +  + ++E     +IE+VL IS +  +DS  +  +D
Sbjct: 1065 KLQLSRIETTLDSKIEDVLTISMEEAEDSSSSSKMD 1100


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 284/854 (33%), Positives = 408/854 (47%), Gaps = 180/854 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRG DTR NFT HL+  L    I+TF DD  L RG  I  SLL  IE S  +++
Sbjct: 21  WDVFLSFRGADTRFNFTDHLYKELMRMDIRTFRDDDGLERGGEIQPSLLKAIEDSMNSVV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S+W                      FY VDPS VRKQ+ SFG       +  
Sbjct: 81  VFSQNYAHSKWCLDELDKIMRSRKEKRQMVLPVFYHVDPSDVRKQTGSFG-------EVT 133

Query: 100 PEKMKRWKNALTEAADLSGF----DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            E++ RW+ ALTEAA+L+G+    D        K+++EI + +  R       K   L+G
Sbjct: 134 EERVLRWRKALTEAANLAGWHVQEDGYETEAIQKIVQEICDLISVRKPLDLDDK---LIG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +++I SL+   S+ V  + I GIGGI K T+A  V+N+    FEG+ F  +V + +
Sbjct: 191 MGPCLKDIASLISNDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKFEGACFLSSVSKRD 250

Query: 216 ETGGIKDLQKKLLSELSKD--GNMRNIESQLN----RLARKKVRIVFDDVT--------- 260
               +  LQ +LL  L+     + RNI   +N    RL  +KV ++ DD+          
Sbjct: 251 ----LLQLQNELLKALTGPYFPSARNIYEGINMIKDRLRFRKVLVILDDIDDQAQLEFLA 306

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  SGSR+I+TTRDK++L+     + Y +KEL   +A  LF  +AF  D       
Sbjct: 307 VRSKWFGSGSRIIVTTRDKRLLQ---VFRLYEVKELNSEEALHLFSLYAFMMDGPQKGFE 363

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+   + + +G+PLALKVLG  L GR+K  WE+ + K+  +   +I  VL  S+  LD 
Sbjct: 364 KLSRCIVDHCEGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKIHSVLLRSFHGLDR 423

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           + + + LDIACF +GE    V  I +A              K+LI++    ++ MHDL++
Sbjct: 424 TNRRILLDIACFFKGEDIKFVREILEACNFCAHPGIRILNEKALISVS-NDKLLMHDLIQ 482

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG +IVR++  + PGK +RLW  +DIY VL  NTGT+AIEGI LDM+  ++EIH+ + A
Sbjct: 483 QMGWDIVREKYPDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLDMS-ASKEIHLTTDA 541

Query: 481 FSKMPKLRFLRFYGD-KNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           F KM KLR LR Y + KN     HL      P  E+R+L W    L++L  N   EKLV 
Sbjct: 542 FKKMKKLRLLRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLESLPSNFHGEKLVE 601

Query: 535 LKMPCTKVEQLWDD-----------------------------VQRLPSSLCT------- 558
           L +  + +++LW +                             V+RL    CT       
Sbjct: 602 LSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRLILDGCTSLLEVHP 661

Query: 559 ----FKTPITFEIIDCKMLERLPD--------------------------ELENLEYLTV 588
                K      + +CKML   P                            +E L  L +
Sbjct: 662 SVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDKFPEIQGYMEYLSELNL 721

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP--- 645
           +GT I ELP S+  L  +  L + N  NL+ +P +I  L  L  L  S C  L+  P   
Sbjct: 722 EGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIM 781

Query: 646 -----------------ELPCN------LGLLSARNCTSLEKLPAGLSSMSSV--LYVNL 680
                            ELP +      L LLS R C +L  LP  + S+ S+  L V+ 
Sbjct: 782 EVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSG 841

Query: 681 CNFLKLDPNELSEI 694
           C+ L   P EL  +
Sbjct: 842 CSNLNKLPEELGSL 855



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 20/193 (10%)

Query: 580  LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +L+YL + G  + +  + ++LGRL +++ L LS N NL  +PE +  LS L  L ++ 
Sbjct: 924  LYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRN-NLVMVPEGVHRLSNLRVLSVNQ 982

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKL-------PAGLSSMSSV--LYVNLCNFLKLDP 688
            C+ LQ + +LP ++  L A +C SLE L       P  LSS S +  L   L N   L  
Sbjct: 983  CKSLQEISKLPPSIKSLDAGDCISLEFLSIPSPQSPQYLSSSSCLHPLSFKLSNCFALAQ 1042

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
            + ++ I++   +  +   E  I+ S+  PG+ IP+WF+H S+GSS T++     P  +NK
Sbjct: 1043 DNVATILEK--LHQNFLPE--IEYSIVLPGSTIPEWFQHPSIGSSETIEL---PPNWHNK 1095

Query: 749  -LISFAFCAVVVF 760
              + FA C+V   
Sbjct: 1096 DFLGFALCSVFTL 1108



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 8/138 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIREL-PESLGRLS 604
           +  LPSS+      ++ ++ +CK L+ LP     L++LE L   G +  E+ PE +  + 
Sbjct: 726 IVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIMEVME 785

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTS 661
            +++L+L   S ++ +P SI HL  L  L +  C+ L++LP   C+L  L       C++
Sbjct: 786 SLQKLLLDGTS-IKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCSN 844

Query: 662 LEKLPAGLSSMSSVLYVN 679
           L KLP  L S+  ++ + 
Sbjct: 845 LNKLPEELGSLQYLMILQ 862


>gi|297740985|emb|CBI31297.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 233/654 (35%), Positives = 353/654 (53%), Gaps = 77/654 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL++ L    I TF DD+ L++G++I   L   IE S I II
Sbjct: 12  YDVFLSFRGEDTRKNFTDHLYNTLVAYGIHTFRDDEELLKGEDIKSGLSRAIEGSKIFII 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFSE YA+S+W                      FY V PS V  QS SF   F    K  
Sbjct: 72  IFSENYAASKWCLNELAMIIEYTTLEDNKVIPVFYHVKPSDVGHQSESFEVAFFNHEKDA 131

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            ++ K    +W+  L +AA LSG+  +  + E+++I++I   ++ RL+         +VG
Sbjct: 132 DQEKKELIEKWRITLKKAAKLSGYHVDN-QHEAEVIQKIREVIITRLNRKPLYVGDNIVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  +++++SL+    + V  + I+GIGGI K TIA A +N IS  F+GS F   V E  
Sbjct: 191 MDFHLKQLKSLVKTELDDVHMVGIYGIGGIGKTTIAMAFYNDISSRFDGSSFLRGVGEKS 250

Query: 216 ETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVT--------- 260
           + GG+ +LQKKL  ++ K      D     I     RL  K+V IV DDV          
Sbjct: 251 K-GGLLELQKKLFKDILKCESTDFDDTSEGINGIKKRLCSKRVLIVLDDVEELEQLENLA 309

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD--HLDAS 311
                  + S +IITT+D  +L     N  Y +KEL + +A  LF  WAF  +       
Sbjct: 310 GKNGWYGAKSTIIITTKDTSLLSQHGVNILYEVKELNHKEAIDLFNWWAFKQNIPKPKED 369

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
              L+   + YA+G+P+ALKVLG +L G+  + W+SA+ KLE IPH++++ VLK+SY+ L
Sbjct: 370 FESLSHCVVGYAKGLPIALKVLGGFLFGKKIDEWKSALHKLEKIPHMKVQSVLKVSYERL 429

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFY----------RIRMHDLLRD 421
           DD++K +FLDIACF +G+ +D V  I     + I + + +          ++ MHDLL+ 
Sbjct: 430 DDTEKEIFLDIACFFKGKDKDLVSRIL-GRYADIGIKVLHERCLITISQNKLDMHDLLQQ 488

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+EIVR+E +  PGKR+RLW   D+  +L +NTGTEAIEG+ +++   N+ +  ++ +F
Sbjct: 489 MGQEIVRQECLKEPGKRSRLWDSNDVDSMLTRNTGTEAIEGLFVEIPTSNK-MQFSTNSF 547

Query: 482 SKMPKLRFLRFYGDKN-KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           +KM +LR    Y  +   C     E  P +++R+L +  C L++L  N     LV L + 
Sbjct: 548 TKMNRLRLFIVYNKRYWNCFKGDFE-FPSSQLRYLNFYGCSLESLPTNFNGRNLVELDLV 606

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
            + +++LW   +        F +     +   K L  +PD   + NLE L ++G
Sbjct: 607 RSGIKKLWKGDE-------IFNSLKVINLGYSKYLVEIPDFSSVPNLEILNLEG 653


>gi|82542045|gb|ABB82030.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 698

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 247/733 (33%), Positives = 378/733 (51%), Gaps = 111/733 (15%)

Query: 9   RGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAIIIFSERYA 67
           RGEDTR  FT HL+  L    I TF  DD+L RG+ IS+ LL  I+ S I+I++FS+ YA
Sbjct: 3   RGEDTRKTFTDHLYTALVQAGIHTFRDDDELSRGEEISKHLLRAIQESKISIVVFSKGYA 62

Query: 68  SSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM-K 104
           SSRW                       FY +DPS VRKQ+ SF   F +  +RF EK+ K
Sbjct: 63  SSRWCLNELVEILKCKNRKTDQIVLPIFYDIDPSDVRKQNGSFAEAFVKHEERFEEKLVK 122

Query: 105 RWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
            W+ AL E+ +LSG++ N +    E+K I+EI  DVL +LD  +    + LVG++     
Sbjct: 123 EWRKALEESGNLSGWNHNDMANGHEAKFIKEIVKDVLNKLDPKYLYVPERLVGMDRLAHN 182

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIK 221
           I   L   ++ V  + I G+ GI K TIA  VFN++   FEGS F  N+ E +++  G+ 
Sbjct: 183 IFDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETSKQFNGLA 242

Query: 222 DLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDVT--------------- 260
            LQK+LL + L +D    N + +       RL RK+V +V DDV                
Sbjct: 243 PLQKQLLHDILKQDAANINCDDRGKVLIKERLRRKRVLVVADDVAHLDQLNALMGERSWF 302

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSRVIITTRD  +L+   A++ YR+KEL   ++ +LF   AF        +IEL+  A
Sbjct: 303 GPGSRVIITTRDSNLLRE--ADQTYRIKELTRDESLRLFSWHAFKDTKPAEDYIELSKDA 360

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ-KNV 378
           + Y  G+PLAL+V+G  L G++++ W+  + KL  IP+ +I+  L+IS+D+LD  + +N 
Sbjct: 361 VDYCGGLPLALEVMGACLSGKNRDGWKCVIDKLRRIPNHDIQGKLRISFDALDGEELQNA 420

Query: 379 FLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLLRDMGR 424
           FLDIACF     ++ V  +  A               +SLI + L   + MHDLLRDMGR
Sbjct: 421 FLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKV-LGGTVTMHDLLRDMGR 479

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           E+VR+ S   PGKR R+W+ +D + VL    GT+ +EG++LD+ + +    +++ +F+KM
Sbjct: 480 EVVRESSPKEPGKRTRIWNQEDAWNVLDHQKGTDVVEGLALDV-RASEAKSLSAGSFAKM 538

Query: 485 PKLRFLRFYGD----KNKCMVSHLEGVPFAEVR--HLEWPQCPLKTLNICAEKLVSLKMP 538
             +  +++       K K M + L+   F  ++  +L   Q  +KT N+ +  L   K+ 
Sbjct: 539 KFVLDMQYSNLKKLWKGKKMRNTLQTPKFLRLKIFNLNHSQHLIKTPNLHSSSLEKPKLK 598

Query: 539 -CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT-TIREL 596
            C+ + ++   +  L S                            L  L ++G   ++ L
Sbjct: 599 GCSSLVEVHQSIGNLKS----------------------------LVILNLEGCWRLKIL 630

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           P+S+G +  +K L +S  S LE++ E +  +  LT L     E  Q L     ++G L  
Sbjct: 631 PKSIGNVKSLKHLNISGCSQLEKLSERMGDMESLTELLADGIETEQFLS----SIGQLK- 685

Query: 657 RNCTSLEKLPAGL 669
             C  LE L A +
Sbjct: 686 --CFELETLAANI 696


>gi|237770135|gb|ACR19031.1| TIR-NBS-LRR-type disease resistance-like protein [Pyrus x
           bretschneideri]
          Length = 1053

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 254/803 (31%), Positives = 376/803 (46%), Gaps = 144/803 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+ FTSHLH  L       FID D L RG  I   LL  IE S I+++
Sbjct: 14  YDVFLSFRGEDTRNGFTSHLHAALQNWGFDAFIDEDNLKRGGEIKPELLRAIEESRISVV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR----- 94
           +FS+ YA SRW                      FY VDPSHVRKQ     R F +     
Sbjct: 74  VFSKSYAESRWCLDELVKIMECRERLGQQVLPIFYHVDPSHVRKQEGCLARAFQKHEDGI 133

Query: 95  -------LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIAND-VLKRLDATF 146
                   R+   E++K+W+ ALT+AA+LSG   N  RPE+K+I+ I  + +++ L  T 
Sbjct: 134 LEEKDDKEREAKKERVKQWREALTQAANLSGHHLNN-RPEAKVIKTIVEENIVELLPGTD 192

Query: 147 QSK-NKGLVGVECSIEEI-ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG 204
           + +  K  VG++  ++ I   L   G   V ++ IWG+GG+ K T A A+++KI   F+ 
Sbjct: 193 ELQVAKYPVGIDSRVQPIINDLFSGGLSDVKRVGIWGMGGLGKTTAANAIYDKIHHGFQF 252

Query: 205 SYFALNVREAEETGGIKDLQKKLLSELSKDGNMRN-----IESQLNRLARKKVRIVFDDV 259
             +  +V + E   G+  LQ++L+S + K     N     I     RL R+KV IV D+V
Sbjct: 253 KCYLGDVSDTERRCGLVHLQEQLVSSILKRTTRINSVGEGISVIKERLRRRKVLIVVDNV 312

Query: 260 TS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF 303
                             GS +IITTRD+ +L     N +Y   E+   +A +LF    F
Sbjct: 313 DKVEQLRAIAGDREWFGPGSIIIITTRDEHLLNQVRVNLRYPAGEMNEEEALELFSWHTF 372

Query: 304 GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEV 363
             +     ++EL+ K + Y  G+PLALKVLG  L GR    W+S + KL+ IP  EI E 
Sbjct: 373 ENNCPKEEYLELSKKVVSYCGGLPLALKVLGSSLFGRPITEWQSYLEKLKRIPEGEIIEK 432

Query: 364 LKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDL------------FY 411
           LKIS+D LD +QK +FL I C   G  +D V  I D       +D+            + 
Sbjct: 433 LKISFDGLDYNQKTIFLHIFCCFLGMRKDHVTKILDECDLHATIDICVLRERCLITVEWG 492

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            ++MHDL+++MG+ I+ ++S   PG+ +R W+ + I  VL   +GTE IE +SL +    
Sbjct: 493 VLKMHDLIQEMGKTIISEKSPTQPGRWSRPWNLEAITDVLTNKSGTEEIEALSLHLPSSE 552

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN---IC 528
           ++    + AF  M KL FLR    +      H       E+R L W   P K +    + 
Sbjct: 553 KKASFRTKAFVNMKKLGFLRLSYVELAGSFKHFP----KELRWLCWHGFPFKYMPEHLLN 608

Query: 529 AEKLVSLKMPCTKVEQLWD-----------------------DVQRLPS----------- 554
             KLV+L +  + + + W                        D  RLP+           
Sbjct: 609 QPKLVALDLSFSNLRKGWKNSKPLENLKILDFSHSEKLKKSPDFSRLPNLEELNFSSCDS 668

Query: 555 ------SLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
                 S+   K         C  L  LP E   L++++ L++   ++RELPE LG +  
Sbjct: 669 LSKIHPSIGQLKKLTWVNFDRCYKLRYLPAEFYKLKSVKNLSLMDCSLRELPEGLGDMVS 728

Query: 606 VKRLILSNNSNLERIPE----------------------SIRHLSKLTFLFISHCERLQT 643
           +++L  ++   +++ P                       S+  LS L  L +  C  L+ 
Sbjct: 729 LRKLD-ADQIAIKQFPNDLGRLISLRVLTVGSYDCCNLPSLIGLSNLVTLTVYRCRCLRA 787

Query: 644 LPELPCNLGLLSARNCTSLEKLP 666
           +P+LP NL    A  C +LE +P
Sbjct: 788 IPDLPTNLEDFIAFRCLALETMP 810


>gi|37654137|emb|CAD56833.1| putative resistance gene analogue protein [Lens culinaris]
          Length = 810

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 263/777 (33%), Positives = 387/777 (49%), Gaps = 145/777 (18%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIF 62
           VF+SFR EDTR  FT HL   L  + IKTF DD  L RG+ IS  L   I+ S  AIII 
Sbjct: 27  VFVSFRSEDTRQGFTDHLFASLERRGIKTFKDDHDLKRGEVISVELNKAIQESMFAIIIL 86

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S  YASS W                      F+ VDPS VR Q  SF + F +  ++  +
Sbjct: 87  SPNYASSTWCLDELQKIVECSKSSGQTFFPIFHGVDPSDVRHQRGSFAKAFRKHEEKLRK 146

Query: 102 ---KMKRWKNALTEAADLSGFDS------------------------------------- 121
              K++RW++AL E A  SG+DS                                     
Sbjct: 147 DRNKIERWRDALREVASYSGWDSKGWLVEMFMLISFYLEFPKHETIITCFLYRLVALFTY 206

Query: 122 --------NVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEG 173
                   ++ R E+ L+E IA  + K+L          LVG++  IEEI SLL +    
Sbjct: 207 RLMQVSFPSLCRKEASLVETIAEHIHKKLIPKLPVCKDNLVGIDSRIEEIYSLLGMRLSD 266

Query: 174 VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELS 232
           V  + IWG+GGI K TIA +V++ I   F+ S F  ++RE    T G+  +Q +LLS L+
Sbjct: 267 VRFIGIWGMGGIGKTTIARSVYDAIKDEFQVSCFLADIRETISRTNGLVRIQTELLSHLT 326

Query: 233 -KDGNMRNIESQ----LNRLARKKVRIVFDDVT----------------SGSRVIITTRD 271
            +  +  NI        N    KKV +V DDV+                SG RVIIT+RD
Sbjct: 327 IRSNDFYNIHDGKKILANSFRNKKVLLVLDDVSELSQLESLAGKQEWFGSGIRVIITSRD 386

Query: 272 KQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALK 331
           K +L     N+ Y+ K LV  +A KLFC  AF  +     ++ L  + ++YA+G+PLAL+
Sbjct: 387 KHLLMTHGVNETYKAKGLVKNEALKLFCLKAFKQNQPKEEYLSLCKEVVEYARGLPLALE 446

Query: 332 VLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHR 391
           VLG +  GR+ EVW SA+ ++  +PH +I + LKISYDSL   ++N+FLDIACF +G   
Sbjct: 447 VLGSHFHGRTVEVWHSALEQMRNVPHSKIHDTLKISYDSLQPMERNMFLDIACFFKGMDI 506

Query: 392 DEVISIFD-------------ASKSLINLDLFYR-IRMHDLLRDMGREIVRKESINHPGK 437
           D V+ I +               +SL++ D   R + MHDLL +MGR IV +ES N PGK
Sbjct: 507 DGVMEILEDCGYYPKIGIDILIERSLVSFDRGDRKLWMHDLLEEMGRNIVCQESPNDPGK 566

Query: 438 RNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF----- 492
           R+RLW  KDI QVL KN GT+ I+GI+L++ +   E   N  AFS++ +LR L+      
Sbjct: 567 RSRLWSQKDIDQVLTKNKGTDKIQGIALNLVQ-PYEAGWNIEAFSRLSQLRLLKLCEIKL 625

Query: 493 -YGDKNKCMVSHLE-----------GVPFAEVRHLEWPQCPLKTLNICA--EKLVSLKMP 538
             G +++   S L            G   + ++ L+W  CPLKT       +++V+LK+ 
Sbjct: 626 PRGSRHELSASPLGTQYVNKTSRGLGCFPSSLKVLDWRGCPLKTPPQTNHFDEIVNLKLF 685

Query: 539 CTKVEQL--WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE-------LENLEYLTVK 589
            +K+E+   W+  +   +SL        F+ +  K+ +  P+        LENL+ + + 
Sbjct: 686 HSKIEKTLAWNTGKDSINSL--------FQFMLLKLFKYHPNNSSILIMFLENLKSINLS 737

Query: 590 -GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
               +   P+ +G +  ++ L+L   ++L  I  S+     L  L +  C+RL+ LP
Sbjct: 738 FSKCLTRSPDFVG-VPNLESLVLEGCTSLTEIHPSLLSHKTLILLNLKDCKRLKALP 793


>gi|30696077|ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737797|dbj|BAF00837.1| hypothetical protein [Arabidopsis thaliana]
 gi|332008724|gb|AED96107.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1229

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 251/776 (32%), Positives = 393/776 (50%), Gaps = 81/776 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R +F SHL   L  KSI TFID+ + R   I+  LL  I  S I+I++
Sbjct: 11  YDVFPSFSGEDVRKSFLSHLLKKLHRKSINTFIDNNIERSHAIAPDLLSAINNSMISIVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS++YASS W                      FY VDPS VRKQ+  FG  F        
Sbjct: 71  FSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQTREFGEFFKVTCVGKT 130

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVEC 158
           E +K +W  AL E A ++G DS     E+ +IE IA DVL +L AT  S   G LVG+E 
Sbjct: 131 EDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIATSSSNCFGDLVGIEA 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++ ++S+LC+ SE    + I G  GI K TIA  +++K+S  F+   F    R  ++  
Sbjct: 191 HLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNY 250

Query: 219 GIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS-------------- 261
           G+K   +++ LSE+   KD  +  +     RL  KKV IV DDV +              
Sbjct: 251 GMKLSWEEQFLSEILDQKDLKISQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWF 310

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSR+I+TT+D+ +LK+   +  Y +       A ++ C+ AF  +      ++L ++ 
Sbjct: 311 GPGSRIIVTTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEV 370

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKISYDSLDDSQKNV 378
            +    +PLAL ++G  L GR KE W   M  L   +   EI + L++SYD L  + + +
Sbjct: 371 TELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEI 430

Query: 379 FLDIACFLEGEHRDEVISIFD----------ASKSLINLD-LFYRIRMHDLLRDMGREIV 427
           FL IAC L     + +IS+            A KSLI++  L   + MH LL+ +GR+IV
Sbjct: 431 FLYIACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIV 490

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R ES  +PGKR  L   +DI  V   NTGTE + GISL+  ++N  + ++  +F  M  L
Sbjct: 491 RDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNL 550

Query: 488 RFLRFY-------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           +FL+ +       G+    +   L  +P  ++R L W + PL+ +  N  AE LV+L+M 
Sbjct: 551 QFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFPLRCMPSNFKAEYLVNLEMA 609

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLTVKGTTI 593
            +++E+LW+  Q+L S           ++   + L+ +PD      LE ++  + K  ++
Sbjct: 610 YSQLERLWEGTQQLGSL-------KKMDLSKSENLKEIPDLSYAVNLEEMDLCSCK--SL 660

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             LP S+  L  ++ L +S+ SN+E +P  + +L  L  L +  C +L++ P++  N+ +
Sbjct: 661 VTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISI 719

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYV--NLCNFLKLDPNELSEIVKDGWMKHSLYEE 707
           L+       E+    + +MS + ++  + C    L  N   E +    M HS  E+
Sbjct: 720 LNLSGTAIDEESSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEK 775



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 170/456 (37%), Gaps = 139/456 (30%)

Query: 509  FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------ 554
             + + HL W  CPLK+L  N   E LVSL M  +K+E+LW+  Q   +            
Sbjct: 738  MSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKL 797

Query: 555  ----SLCTFKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELP-----ESLG 601
                +L       T ++  CK L  +P  +++L  LT     + T +  LP     ESL 
Sbjct: 798  KEFPNLSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPTDVNLESLH 857

Query: 602  RLSW---------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
             L                 ++RL+L +++ +E +P  I    +LT L +  C+RL+ +  
Sbjct: 858  TLDLSGCSKLTTFPKISRNIERLLL-DDTAIEEVPSWIDDFFELTTLSMKGCKRLRNIST 916

Query: 647  LPCNLGLLSARNCTSLEKLPA------------------GLSSMSSVLY---------VN 679
              C L  +   N +  E+L                     L   +S L+         V+
Sbjct: 917  SICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVS 976

Query: 680  LCNFLKLDPNELS--------EIVKDGWMKHSLYEERGIKKSMY----FPGNEIPKWFRH 727
            +C  +   P  LS        +++           E  I +S +     PG ++P  F +
Sbjct: 977  ICAMVFKYPQALSYFFNSPEADLIFANCSSLDRDAETLILESNHGCAVLPGGKVPNCFMN 1036

Query: 728  QSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLK----------YFRHKSGEDDW 776
            Q+ GSS ++   P   + Y+ + + F  C V+  P  L           YFR K  E   
Sbjct: 1037 QACGSSVSI---PLHESYYSEEFLGFKACIVLETPPDLNFKQSWIWVRCYFRDKCVE--- 1090

Query: 777  DGNVYAVCCDWKRKSEGHLY--------SWFLGKISYVESD--------HVFLGCNSFGG 820
                ++V   W      HL            +G  S +++D        H++  CNS   
Sbjct: 1091 ----HSVQFSWDSNKMDHLLMINFRLPTKEIIGCPSQLDTDDLMFFFYHHMYYACNS--- 1143

Query: 821  EYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHF 856
             Y  P+              P  ++R  +K CGI F
Sbjct: 1144 -YVNPS--------------PCSVQR--IKGCGIKF 1162


>gi|332330347|gb|AEE43933.1| TIR-NBS-LRR resistance protein muRdr1I [Rosa multiflora]
          Length = 628

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 222/613 (36%), Positives = 328/613 (53%), Gaps = 70/613 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I+TF DD QL RG  IS  LL  I+ S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYHELRRRGIRTFRDDPQLERGTAISPELLTAIKQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YA+S+W                     FY VD   V+ Q  SF + F    ++F 
Sbjct: 79  VLSPNYATSKWCLLELSKIIKCMKERGTIMPIFYEVDTDDVKHQRGSFAKAFQEHEEKFG 138

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD---ATFQSKNKGLV 154
              +K++ W++ALT+ A  +G+ S   R E++LI EI   +  ++      F S  K LV
Sbjct: 139 VGNKKVEGWRDALTKVASFAGWTSKDYRYETELIREIVQVLWSKVHPCLTVFGSSEK-LV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  +E+I+ LL   ++ V  + IWG+GG+ K T+A  V+ KIS  FE   F  NVRE 
Sbjct: 198 GMDTKLEDIDVLLDKETKDVRFIGIWGMGGLGKTTLARLVYEKISHLFEVCVFLANVREV 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
             T G+  LQK++LS++ K+ N++  ++ S +    R    K V +V DD          
Sbjct: 258 SATHGLVYLQKQILSQIWKEENIQVWDVYSGITMTKRCFCNKAVLLVLDDADQSEQLENL 317

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTR++ VL      K Y +K L   +A +LF   AF     +  +
Sbjct: 318 VGEKDWFGLRSRIIITTRNRHVLVTHGIEKPYELKGLNEDEALQLFSWKAFRNYEPEEDY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +E +   + YA G+P+ALK LG +L  RS + W  A+ KL   P+  + ++LK+SY  LD
Sbjct: 378 VEQSKSFVMYAGGLPIALKTLGSFLYRRSPDAWNFALAKLRNTPNKTVFDLLKVSYVGLD 437

Query: 373 DSQKNVFLDIACF---LEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLL 419
           + +K +FLDIACF    E +   E++  +D            KSL+ +     I MHDL+
Sbjct: 438 EMEKKIFLDIACFSSQCEAKFIIELLYSYDVCTGIAIEVLVEKSLLTISSNNEIGMHDLI 497

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           R+MG EIVR+ES   PG R+RLW   DI+ V  KNTGTE  EGI L ++++  E   N  
Sbjct: 498 REMGCEIVRQESYEEPGGRSRLWFRNDIFHVFTKNTGTEVTEGIFLHLHQLE-EADWNLE 556

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKM 537
           AFSKM  L+ L  +   N  +    + +P A +R L+W   P K+L  C   ++L  L +
Sbjct: 557 AFSKMCNLKLLYIH---NLRLSLGPKFLPDA-LRILKWSWYPSKSLPPCFQPDELTELSL 612

Query: 538 PCTKVEQLWDDVQ 550
             + ++ LW+ ++
Sbjct: 613 VHSNIDHLWNGIK 625


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 260/768 (33%), Positives = 402/768 (52%), Gaps = 92/768 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRG+DTR NFT HL+  L  K I+TF  D   +G+ I  + L  IE S   ++I
Sbjct: 228 YEVFLSFRGQDTRQNFTDHLYAALYQKGIRTFRMDH-TKGEMILPTTLRAIEMSRCFLVI 286

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YA S+W                      FY V+PS VR Q  S+G   +   ++ P
Sbjct: 287 LSKNYAHSKWCLDELKEIMESRRQMGKIVFPVFYHVNPSDVRNQGESYGEALANHERKIP 346

Query: 101 -EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E  ++ + AL E  +LSG+   N    ES  I++I   +L +        +K L+G++ 
Sbjct: 347 LEYTQKLRAALREVGNLSGWHIQNGF--ESDFIKDITRVILMKFSQKLLQVDKNLIGMDY 404

Query: 159 SIEEIE----SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            +E++E     ++   S  V  + I+G GGI K T+A  ++N+I   F  + F  NVRE 
Sbjct: 405 RLEDMEEIFPQIIDPLSNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 464

Query: 215 EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDVT-------- 260
            ++ G+  LQK+LL + L K  N +RN++  +    +RL  KKV +V DDV         
Sbjct: 465 SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEAL 524

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+I+TTRDK +L+    +  Y  K+L + +A +LFC  AF  +H    +
Sbjct: 525 AGDHNWFGPGSRIIVTTRDKHLLEVHEIDALYEAKKLDHKEAVELFCWNAFKQNHPKEDY 584

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L++  + Y  G+PL LKVLGC+L G++   WES ++KL+  P+ EI+ VLK SYD LD
Sbjct: 585 ETLSNSVVHYVNGLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRVLKRSYDVLD 644

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            +Q+ +FLD+ACF  GE +D V  I DA              K  I + L  +I MHDLL
Sbjct: 645 YTQQQIFLDVACFFNGEDKDFVTRILDACNFYAESGIGVLGDKCFITI-LDNKIWMHDLL 703

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           + MGR+IVR+E    PGK +RL + + + +VL +  GTEAIEGI L+++++ R IH+++ 
Sbjct: 704 QQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKMGTEAIEGILLNLSRLMR-IHISTE 762

Query: 480 AFSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--A 529
           AF+ M  LR L+ Y D         NK  +S     P  E+R+L W   PL++L +   A
Sbjct: 763 AFAMMKNLRLLKIYWDLEYAFMREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYA 822

Query: 530 EKLVSLKMPCTKVEQLWDD---VQRLPSSLCTFKT------PITFEIIDCKMLER-LPDE 579
           E LV L M  + +++LW+    V++L +   +F         +T+  + C    R   + 
Sbjct: 823 EDLVELDMCYSSLKRLWEGDLLVEKLNTIKVSFSQHLIEIPDMTYNTMGCFNGTRNSSNS 882

Query: 580 LENLEYLTVKGTTIRELPESLGRLS---WVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
           L N     +     R    +L R +   ++ R IL   S+L  +  SI  L+KL  L + 
Sbjct: 883 LFNQIPSQIPCAIARNSASALLRATTDCFLLRHILDGCSSLLEVHPSIGKLNKLILLNLK 942

Query: 637 HCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           +C++L   P +     L +L+   C+ L+K P    +M ++L + L +
Sbjct: 943 NCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLAS 990



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 98/182 (53%), Gaps = 27/182 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDTR NFT HL+  L  K I+TF D ++L RG+ I+  LL  IE S I ++
Sbjct: 27  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHEELRRGEEIAAELLKAIEESRICVV 86

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA SRW                      FY+VDPS+VRKQ  S+G   +   +  
Sbjct: 87  ILSKNYARSRWCLDELVKIMGWKKCMGQLVLPIFYQVDPSNVRKQKGSYGEALADHERNA 146

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            E    K+KRW+ AL     +SG+      PE+ +IE+I + V K L+       K LVG
Sbjct: 147 DEEGMSKIKRWREALWNVGKISGWCLKN-GPEAHVIEDITSTVWKSLNRELLHVEKNLVG 205

Query: 156 VE 157
           ++
Sbjct: 206 MD 207



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 149/343 (43%), Gaps = 76/343 (22%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPSS  +F++    +I DCK++E                     +P  +  L  +K+L 
Sbjct: 1184 RLPSSFSSFRSLSNLDISDCKLIEG-------------------AIPNGICSLISLKKLD 1224

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N N   IP  I  L+ L  L +  C+ L  +PELP ++  + A NCT+L  LP G S
Sbjct: 1225 LSRN-NFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTAL--LP-GSS 1280

Query: 671  SMSSV-----LYVNLC------------NFLKLDPN-------ELSEIVKDGWMKHSLYE 706
            S++++     L+ N                L++ P+         S +     M   L E
Sbjct: 1281 SVNTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLE 1340

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLK 765
               I  S+ FPG  IP+W  HQ++GSS  +K + P     +  + FA C+V+   P   +
Sbjct: 1341 --NIAFSIVFPGTGIPEWIWHQNVGSS--IKIQLPTDWHSDDFLGFALCSVLEHLPE--R 1394

Query: 766  YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEY 822
               H + +    G++         K  GH + W  G I  V S+HV+LG   C+      
Sbjct: 1395 IICHLNSDVFNYGDL---------KDFGHDFHW-TGNI--VGSEHVWLGYQPCSQLRLFQ 1442

Query: 823  FGP----NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            F      N+ E SF     F+         VKKCG+  +YA+D
Sbjct: 1443 FNDPNEWNHIEISFEAAHRFNSSA---SNVVKKCGVCLIYAED 1482



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)

Query: 570  CKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
            C  L++ P+    +ENL  L +  T I ELP S+G L+ +  L L    NL+ +  SI  
Sbjct: 967  CSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICK 1026

Query: 627  LSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
            L  L  L +S C +L++ PE+  N+  L     + T +E LP+ +  +  ++ +NL
Sbjct: 1027 LKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNL 1082



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 23/145 (15%)

Query: 530  EKLVSLKMPCTKVEQL----------------W-DDVQRLPSSLCTFKTPITFEIIDCKM 572
            E L+ L +  T +E+L                W  +++ L +S+C  K+     +  C  
Sbjct: 981  ENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSK 1040

Query: 573  LERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
            LE  P+ +EN   L+ L + GT I  LP S+ RL  +  L L    NL  +   + +L+ 
Sbjct: 1041 LESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTS 1100

Query: 630  LTFLFISHCERLQTLPELPCNLGLL 654
            L  L +S C +L  LP    NLG L
Sbjct: 1101 LETLIVSGCLQLNNLPR---NLGSL 1122


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 286/867 (32%), Positives = 413/867 (47%), Gaps = 193/867 (22%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRG DTR NFT HL+  L    I+TF DD  L RG  I  SLL  IE S  +++
Sbjct: 21  WDVFLSFRGADTRFNFTDHLYKELMRMDIRTFRDDDGLERGGEIQPSLLKAIEDSMNSVV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S+W                      FY VDPS VRKQ+ SFG       +  
Sbjct: 81  VFSQNYAHSKWCLDELDKIMRSRKEKRQMVLPVFYHVDPSDVRKQTGSFG-------EVT 133

Query: 100 PEKMKRWKNALTEAADLSGF----DSNVIRPES-------------KLIEEIANDVLKRL 142
            E++ RW+ ALTEAA+L+G+    D +++R  S             K+++EI + +  R 
Sbjct: 134 EERVLRWRKALTEAANLAGWHVQEDGSLLRVLSCFVIGRYETEAIQKIVQEICDLISVRK 193

Query: 143 DATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF 202
                 K   L+G+   +++I SL+   S+ V  + I GIGGI K T+A  V+N+    F
Sbjct: 194 PLDLDDK---LIGMGPCLKDIASLISNDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKF 250

Query: 203 EGSYFALNVREAEETGGIKDLQKKLLSELSKD--GNMRNIESQLN----RLARKKVRIVF 256
           EG+ F  +V + +    +  LQ +LL  L+     + RNI   +N    RL  +KV ++ 
Sbjct: 251 EGACFLSSVSKRD----LLQLQNELLKALTGPYFPSARNIYEGINMIKDRLRFRKVLVIL 306

Query: 257 DDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQ 300
           DD+                 SGSR+I+TTRDK++L+     + Y +KEL   +A  LF  
Sbjct: 307 DDIDDQAQLEFLAVRSKWFGSGSRIIVTTRDKRLLQ---VFRLYEVKELNSEEALHLFSL 363

Query: 301 WAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEI 360
           +AF  D       +L+   + + +G+PLALKVLG  L GR+K  WE+ + K+  +   +I
Sbjct: 364 YAFMMDGPQKGFEKLSRCIVDHCEGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKI 423

Query: 361 EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINL 407
             VL  S+  LD + + + LDIACF +GE    V  I +A              K+LI++
Sbjct: 424 HSVLLRSFHGLDRTNRRILLDIACFFKGEDIKFVREILEACNFCAHPGIRILNEKALISV 483

Query: 408 DLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM 467
               ++ MHDL++ MG +IVR++  + PGK +RLW  +DIY VL  NTGT+AIEGI LDM
Sbjct: 484 S-NDKLLMHDLIQQMGWDIVREKYPDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLDM 542

Query: 468 NKVNREIHMNSYAFSKMPKLRFLRFYGD-KNKCMVSHLEG---VPFAEVRHLEWPQCPLK 523
           +  ++EIH+ + AF KM KLR LR Y + KN     HL      P  E+R+L W    L+
Sbjct: 543 S-ASKEIHLTTDAFKKMKKLRLLRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLE 601

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWDD-----------------------------VQRL 552
           +L  N   EKLV L +  + +++LW +                             V+RL
Sbjct: 602 SLPSNFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRL 661

Query: 553 PSSLCT-----------FKTPITFEIIDCKMLERLPD----------------------- 578
               CT            K      + +CKML   P                        
Sbjct: 662 ILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDKFPE 721

Query: 579 ---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
               +E L  L ++GT I ELP S+  L  +  L + N  NL+ +P +I  L  L  L  
Sbjct: 722 IQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVF 781

Query: 636 SHCERLQTLP--------------------ELPCN------LGLLSARNCTSLEKLPAGL 669
           S C  L+  P                    ELP +      L LLS R C +L  LP  +
Sbjct: 782 SGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSI 841

Query: 670 SSMSSV--LYVNLCNFLKLDPNELSEI 694
            S+ S+  L V+ C+ L   P EL  +
Sbjct: 842 CSLRSLETLIVSGCSNLNKLPEELGSL 868



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 20/193 (10%)

Query: 580  LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            L +L+YL + G  + +  + ++LGRL +++ L LS N NL  +PE +  LS L  L ++ 
Sbjct: 937  LYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRN-NLVMVPEGVHRLSNLRVLSVNQ 995

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKL-------PAGLSSMSSV--LYVNLCNFLKLDP 688
            C+ LQ + +LP ++  L A +C SLE L       P  LSS S +  L   L N   L  
Sbjct: 996  CKSLQEISKLPPSIKSLDAGDCISLEFLSIPSPQSPQYLSSSSCLHPLSFKLSNCFALAQ 1055

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
            + ++ I++   +  +   E  I+ S+  PG+ IP+WF+H S+GSS T++     P  +NK
Sbjct: 1056 DNVATILEK--LHQNFLPE--IEYSIVLPGSTIPEWFQHPSIGSSETIEL---PPNWHNK 1108

Query: 749  -LISFAFCAVVVF 760
              + FA C+V   
Sbjct: 1109 DFLGFALCSVFTL 1121



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 8/138 (5%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIREL-PESLGRLS 604
           +  LPSS+      ++ ++ +CK L+ LP     L++LE L   G +  E+ PE +  + 
Sbjct: 739 IVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIMEVME 798

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTS 661
            +++L+L   S ++ +P SI HL  L  L +  C+ L++LP   C+L  L       C++
Sbjct: 799 SLQKLLLDGTS-IKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCSN 857

Query: 662 LEKLPAGLSSMSSVLYVN 679
           L KLP  L S+  ++ + 
Sbjct: 858 LNKLPEELGSLQYLMILQ 875


>gi|224095409|ref|XP_002310389.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222853292|gb|EEE90839.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 560

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 202/513 (39%), Positives = 290/513 (56%), Gaps = 64/513 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ ISQ LL  I+ S I I+
Sbjct: 15  YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISQHLLEAIQESKICIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  +R
Sbjct: 75  VFSKGYASSRWCLDELVEILKCKYRKTGQIALPIFYDIDPSDVRKQTGSFAEAFVKHEER 134

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             EK+K W+ AL EA +LSG++   +    E+K I+ I  +V  +L     +     VG+
Sbjct: 135 SEEKVKEWREALEEAGNLSGWNLKDMTNGHEAKFIQHIIKEVWNKLSPKDMNVGTHPVGI 194

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  + EI   +  G+E VC + I G+ GI K TIA  VF+K+   FEGS F LNV+E  E
Sbjct: 195 DPLVNEIRDFVSNGTEKVCIVGIHGMPGIGKTTIAKEVFDKLCDEFEGSSFLLNVKEKSE 254

Query: 217 TGGIKDLQKKLLSELSKDGN--MRNIESQL----NRLARKKVRIVFDDVT---------- 260
           +  +  LQK+LL ++ +     + N++        RL  K+V +V DDV           
Sbjct: 255 SKDMVLLQKQLLHDILRQNTEKINNVDRGKVLIKERLPHKRVLVVVDDVARPDQLLDLMG 314

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVIITTRD+ +L    A+++Y+++EL   ++ +LFC+ AF        ++E
Sbjct: 315 EPSWLGPGSRVIITTRDESLLLE--ADQRYQVQELNRDNSLQLFCRHAFRDTKPAKDYVE 372

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  ++Y  G+PLALKVLG  L G+++  WES + +L   P+ EI++ L+IS+D+LD+S
Sbjct: 373 LSNDVVEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKKLRISFDTLDES 432

Query: 375 Q-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLL 419
             KN FLDIACF  G  ++ V  + +                +SLI +D    I MHDLL
Sbjct: 433 TLKNTFLDIACFFIGRKKEYVAKVLEGRYGYNPEDDFGTLIERSLIKVDDSGTIGMHDLL 492

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
           R MGREIV++ES  +P +R+R+W  +D + VLK
Sbjct: 493 RGMGREIVKEESPENPAQRSRIWSQEDAWIVLK 525


>gi|240256404|ref|NP_199439.5| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
 gi|332007978|gb|AED95361.1| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
          Length = 1139

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 369/735 (50%), Gaps = 80/735 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG D R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 22  LYDVFLSFRGGDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKDSRIAVV 81

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           IFS+ YASS W                   FY VDPS VR Q   FG+ F +  KR  E+
Sbjct: 82  IFSKNYASSSWCLNELLEIVNCNDKIVIPVFYGVDPSQVRHQIGDFGKIFEKTCKRQTEQ 141

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K +WK ALT+ A++ GFDS     E+K+IEEIANDVL +L  T     +  VG+E  I 
Sbjct: 142 VKNQWKKALTDVANMLGFDSATWDDEAKMIEEIANDVLAKLLLTTPKDFENFVGIEDHIA 201

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVREAEE 216
            +  LL + +E V  + IWG  GI K TIA A+FN++SRHF  S      F    RE   
Sbjct: 202 NMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSREIFS 261

Query: 217 TGGIKD------LQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
                D      LQ+KLLSE+ +  D  + ++     RL  +KV I+ DD+         
Sbjct: 262 RANPDDHNMKLHLQEKLLSEILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVILDSL 321

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+I  T +K  L+    +  Y +       A  + CQ AF         
Sbjct: 322 VGQTQWFGSGSRIIAVTNNKHFLRAHEIDHIYEVSLPTQQHALAMLCQSAFRKKSPPEGF 381

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL- 371
             L  +  ++   +PL L VLG YL GR KE W   + +LE   H +IE++L+ISYD L 
Sbjct: 382 EMLVVQVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRLENGLHDKIEKILRISYDGLG 441

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD------ASKSLINLDLFYR----IRMHDLLRD 421
            +  K +F  IAC         + S+          K+L++  + +     + MH +L++
Sbjct: 442 SEEDKAIFRHIACLFNHMEVTTITSLLTDLGINIGLKNLVDKSIIHVRRGCVEMHRMLQE 501

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IVR +SI+ PGKR  L    DI  VL +  GT+ + GISL+  +++ E++++  AF
Sbjct: 502 MGRKIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISLNTGEID-ELYVHESAF 560

Query: 482 SKMPKLRFLRF----YGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             M  LRFL      +G   +  +   L+ +P   ++ L WP  P++ +  N   E LV+
Sbjct: 561 KGMSNLRFLEIDSKNFGKAGRLYLPESLDYLP-PRLKLLCWPNFPMRCMPSNFRPENLVT 619

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GT 591
           LKMP +K+ +LW+ V    +SL   K     +++    L+ +PD     NLE L +    
Sbjct: 620 LKMPNSKLHKLWEGV----ASLTCLK---EMDMVGSSNLKEIPDLSMPTNLEILKLGFCK 672

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ ELP S+  L+ + +L +    +LE +P    +L  L  L   +C  L+T PE   N+
Sbjct: 673 SLVELPSSIRNLNKLLKLDMEFCHSLEILPTGF-NLKSLDHLNFRYCSELRTFPEFSTNI 731

Query: 652 GLLSARNCTSLEKLP 666
            +L     T++E+ P
Sbjct: 732 SVLMLFG-TNIEEFP 745



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 48/232 (20%)

Query: 573  LERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
            LE L   L++L+   +   ++ ELP S   L+ +K L ++   NLE +P  I +L  L +
Sbjct: 775  LEMLSPTLKSLKLENIP--SLVELPSSFQNLNQLKELSITYCRNLETLPTGI-NLKSLNY 831

Query: 633  LFISHCERLQTLPELPCNLGLL-----------------------SARNCTSLEKLPAGL 669
            L    C +L++ PE+  N+ +L                       + R+C+ L+ L   +
Sbjct: 832  LCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNI 891

Query: 670  SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS---------------------LYEER 708
              M ++  V+  +   L    LS    D   +                       L++E 
Sbjct: 892  PKMKTLWDVDFSDCAALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPETVLHQES 951

Query: 709  GIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK-LISFAFCAVVV 759
             I  SM FPG ++P +F +++ G+S  L   P  P   ++    F  CAV  
Sbjct: 952  VIFNSMAFPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRVCAVAT 1003


>gi|357456941|ref|XP_003598751.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355487799|gb|AES69002.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1082

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 289/909 (31%), Positives = 436/909 (47%), Gaps = 170/909 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR+NFT +L++ L+ + I+TF DD+ I +G+ I+ +LL  I+ S I I+
Sbjct: 17  YDVFLSFRGIDTRNNFTGNLYNSLNQRGIRTFFDDEEIQKGEEITPTLLQAIKESRIFIV 76

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPS +R  + ++   F++   RF
Sbjct: 77  VFSTNYASSTFCLTELVTILGCSKSQGRIFLPIFYDVDPSQIRNLTGTYAEAFAKHEMRF 136

Query: 100 ---PEKMKRWKNALTEAADLSG--------------FDSNVI------------------ 124
               +K+++W++AL +AA++SG              + S+V+                  
Sbjct: 137 GDEEDKVQKWRDALRQAANMSGWHFKPGYEPTNIDAYVSDVVFDQKCQCYETYNSSSAVE 196

Query: 125 --------RPESKLIEEIANDV-LKRLDATFQSKNKGLVGVECSIEEIESLLCIGS-EGV 174
                     E K I +I  +V +K     F   N   VG+E  + E+ SLL +GS E  
Sbjct: 197 QECVSFESESEYKFIGKIVEEVSIKSSCIPFHVANYP-VGLESRMLEVTSLLGLGSDERT 255

Query: 175 CKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKD 234
             + I+GIGGI K T A AV N I+  FE   F   +RE     G+  LQ+ LLSE+  +
Sbjct: 256 NMVGIYGIGGIGKSTTARAVHNLIADQFESVCFLAGIRERAINHGLAHLQETLLSEILGE 315

Query: 235 GNM------RNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDK 272
            ++      R I     RL RKKV ++ DDV                  G+++IITTRDK
Sbjct: 316 KDIKVGDVYRGISIIKRRLQRKKVLLILDDVDKVEHLRALAGGHDWFGLGTKIIITTRDK 375

Query: 273 QVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKV 332
            +L      K Y++KEL    A +LF   AF    +D  ++++  +A+ Y  G+PLAL+V
Sbjct: 376 HLLATHGIVKVYKVKELNNEKAFELFSWHAFKNKKIDPCYVDIAKRAVSYCHGLPLALEV 435

Query: 333 LGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACF------- 385
           +G +L G+S +VW+S + K E +   +I E LK+SYD LD+ +K +FLDIACF       
Sbjct: 436 IGSHLFGKSLDVWKSLLDKYERVLRKDIHETLKVSYDDLDEDEKGIFLDIACFFNSYKIG 495

Query: 386 -------LEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR 438
                  L G H D+ I +    KSLI +D    +RMHDL++ MGREIVR+ES   PG+R
Sbjct: 496 YVKEILYLHGFHADDGIQVL-TDKSLIKIDANSCVRMHDLIQGMGREIVRQESTLEPGRR 554

Query: 439 NRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNK 498
           +RLW   DI  VL++N GT+ IE I  ++ K +R++     AF +M  LR L     +N 
Sbjct: 555 SRLWFSDDIVHVLEENKGTDTIEVIIANLCK-DRKVKWCGKAFGQMKNLRILII---RNA 610

Query: 499 CMVSHLEGVPFAEVRHLEWPQCPLKTL----NICAEKLVSLKMPCTKVEQLWDDVQRLPS 554
                 + +P   +R L+W      +L    N     L+SL+  C K  +L         
Sbjct: 611 RFSRGPQILP-NSLRVLDWSGHESSSLPSDFNPKNLVLLSLRESCLKRFKL--------- 660

Query: 555 SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNN 614
            L  F+T I  +  DCK L  +P                     SL R+  +  L L   
Sbjct: 661 -LNVFETLIFLDFEDCKFLTEIP---------------------SLSRVPNLGSLCLDYC 698

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPC----NLGLLSARNCTSLEKLPAGLS 670
           +NL RI +S+  L KL  L    C +LQ+L  +PC    +L  L    C+ LE  P  L 
Sbjct: 699 TNLFRIHDSVGFLDKLVLLSAKRCIQLQSL--VPCMNLPSLETLDLTGCSRLESFPEVLG 756

Query: 671 SMSSV--LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ 728
            M ++  +Y++  N  +L P  +  +V  G  +  L   R  ++ +  P   +PK     
Sbjct: 757 VMENIKDVYLDGTNLYQL-PVTIGNLV--GLKRLFL---RSCQRMIQIPSYVLPK----- 805

Query: 729 SMGSSATLKTRPPRPAGYNKLIS--FAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCC- 785
            +    +   R  R + Y + +S   +  A+ V+  + K F +    +    NV  VC  
Sbjct: 806 -VEIVISHHRRAVRSSNYAEKVSPKVSTNAMCVYNEYGKSFLNVYSLNVSSNNVIEVCSP 864

Query: 786 DWKRKSEGH 794
            W +  +GH
Sbjct: 865 SWNQ--DGH 871


>gi|9758205|dbj|BAB08679.1| disease resistance protein; strong similarity to TMV resistance
           protein N [Arabidopsis thaliana]
          Length = 1239

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 251/776 (32%), Positives = 393/776 (50%), Gaps = 81/776 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R +F SHL   L  KSI TFID+ + R   I+  LL  I  S I+I++
Sbjct: 11  YDVFPSFSGEDVRKSFLSHLLKKLHRKSINTFIDNNIERSHAIAPDLLSAINNSMISIVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS++YASS W                      FY VDPS VRKQ+  FG  F        
Sbjct: 71  FSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQTREFGEFFKVTCVGKT 130

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVEC 158
           E +K +W  AL E A ++G DS     E+ +IE IA DVL +L AT  S   G LVG+E 
Sbjct: 131 EDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIATSSSNCFGDLVGIEA 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++ ++S+LC+ SE    + I G  GI K TIA  +++K+S  F+   F    R  ++  
Sbjct: 191 HLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNY 250

Query: 219 GIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS-------------- 261
           G+K   +++ LSE+   KD  +  +     RL  KKV IV DDV +              
Sbjct: 251 GMKLSWEEQFLSEILDQKDLKISQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWF 310

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSR+I+TT+D+ +LK+   +  Y +       A ++ C+ AF  +      ++L ++ 
Sbjct: 311 GPGSRIIVTTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEV 370

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKISYDSLDDSQKNV 378
            +    +PLAL ++G  L GR KE W   M  L   +   EI + L++SYD L  + + +
Sbjct: 371 TELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEI 430

Query: 379 FLDIACFLEGEHRDEVISIFD----------ASKSLINLD-LFYRIRMHDLLRDMGREIV 427
           FL IAC L     + +IS+            A KSLI++  L   + MH LL+ +GR+IV
Sbjct: 431 FLYIACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIV 490

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R ES  +PGKR  L   +DI  V   NTGTE + GISL+  ++N  + ++  +F  M  L
Sbjct: 491 RDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNL 550

Query: 488 RFLRFY-------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           +FL+ +       G+    +   L  +P  ++R L W + PL+ +  N  AE LV+L+M 
Sbjct: 551 QFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFPLRCMPSNFKAEYLVNLEMA 609

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLTVKGTTI 593
            +++E+LW+  Q+L S           ++   + L+ +PD      LE ++  + K  ++
Sbjct: 610 YSQLERLWEGTQQLGSL-------KKMDLSKSENLKEIPDLSYAVNLEEMDLCSCK--SL 660

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             LP S+  L  ++ L +S+ SN+E +P  + +L  L  L +  C +L++ P++  N+ +
Sbjct: 661 VTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISI 719

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYV--NLCNFLKLDPNELSEIVKDGWMKHSLYEE 707
           L+       E+    + +MS + ++  + C    L  N   E +    M HS  E+
Sbjct: 720 LNLSGTAIDEESSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEK 775



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 170/456 (37%), Gaps = 139/456 (30%)

Query: 509  FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------ 554
             + + HL W  CPLK+L  N   E LVSL M  +K+E+LW+  Q   +            
Sbjct: 738  MSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKL 797

Query: 555  ----SLCTFKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELP-----ESLG 601
                +L       T ++  CK L  +P  +++L  LT     + T +  LP     ESL 
Sbjct: 798  KEFPNLSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPTDVNLESLH 857

Query: 602  RLSW---------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
             L                 ++RL+L +++ +E +P  I    +LT L +  C+RL+ +  
Sbjct: 858  TLDLSGCSKLTTFPKISRNIERLLL-DDTAIEEVPSWIDDFFELTTLSMKGCKRLRNIST 916

Query: 647  LPCNLGLLSARNCTSLEKLPA------------------GLSSMSSVLY---------VN 679
              C L  +   N +  E+L                     L   +S L+         V+
Sbjct: 917  SICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVS 976

Query: 680  LCNFLKLDPNELS--------EIVKDGWMKHSLYEERGIKKSMY----FPGNEIPKWFRH 727
            +C  +   P  LS        +++           E  I +S +     PG ++P  F +
Sbjct: 977  ICAMVFKYPQALSYFFNSPEADLIFANCSSLDRDAETLILESNHGCAVLPGGKVPNCFMN 1036

Query: 728  QSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLK----------YFRHKSGEDDW 776
            Q+ GSS ++   P   + Y+ + + F  C V+  P  L           YFR K  E   
Sbjct: 1037 QACGSSVSI---PLHESYYSEEFLGFKACIVLETPPDLNFKQSWIWVRCYFRDKCVE--- 1090

Query: 777  DGNVYAVCCDWKRKSEGHLY--------SWFLGKISYVESD--------HVFLGCNSFGG 820
                ++V   W      HL            +G  S +++D        H++  CNS   
Sbjct: 1091 ----HSVQFSWDSNKMDHLLMINFRLPTKEIIGCPSQLDTDDLMFFFYHHMYYACNS--- 1143

Query: 821  EYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHF 856
             Y  P+              P  ++R  +K CGI F
Sbjct: 1144 -YVNPS--------------PCSVQR--IKGCGIKF 1162


>gi|297836995|ref|XP_002886379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332220|gb|EFH62638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 260/883 (29%), Positives = 414/883 (46%), Gaps = 162/883 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VF SF G D R    SH+    +   I  F D+++ R   I+ SL+G I  S I+I+I
Sbjct: 17  FNVFASFHGPDVRKTLLSHMRKQFNRNGITMFDDEKIERSATIAPSLIGGIRDSRISIVI 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY  DPS VRKQ   FG  F      + 
Sbjct: 77  LSKKYASSSWCLDELVEILECKKVMGQIVMTIFYGADPSDVRKQLGEFGIAFDETCAHKT 136

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ K+W  AL E  +++G D N    E+ +I++IA DV  +L+AT      G+VG+   
Sbjct: 137 DEERKKWSEALNEVGNIAGEDFNRWDNEANMIKKIAEDVSDKLNATPSRVFDGMVGLTAH 196

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + ++ESLL + ++ V  + I G  GI K TIA A+   +S  F+ + F  N+R +   G 
Sbjct: 197 LRKMESLLDLDNDEVKMVAITGPAGIGKTTIARALQTLLSNKFQLTCFVDNLRGSYYNGL 256

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVTS--------------- 261
            +  LQ++ LS L     +R   S +   RL +++V I+ DDV +               
Sbjct: 257 DVVRLQEQFLSNLLNQDGLRIRHSGVIEERLCKQRVLIILDDVNNIKQLMALANETTWFG 316

Query: 262 -GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
            GSR+++TT +K++L+    +  Y +      DA K+ C++AF  + L     +L  + I
Sbjct: 317 PGSRIVVTTENKELLQQHGIDNMYHVGFPSDEDAIKILCKYAFRKNSLYHGFKKLAKRVI 376

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
           +    +PL L V+G  L G+++E WE  + KLE   + +IEEVL+I Y+SLD++++++FL
Sbjct: 377 ELCCNLPLGLCVVGSSLRGKNEEEWEQVIHKLETNLNQDIEEVLRIGYESLDENEQSLFL 436

Query: 381 DIACFLEGEHRDEVISIFDAS--------KSLINLDLFY------RIRMHDLLRDMGREI 426
            IA F   +  D + ++F  S        K L+N  L        RI MH LL+ +G++ 
Sbjct: 437 HIAVFFNHKDGDHMKTMFAESDLDVKHGLKILVNRSLVEISTYDGRIMMHRLLQQVGKKA 496

Query: 427 VRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
           + K+    P KR  L    DI  VL++ TGT A+ GIS D++ +N E+ ++  AF +MP 
Sbjct: 497 IHKQ---EPWKRKILLDAPDICDVLERATGTRAMSGISFDISGIN-EVSISKKAFQRMPN 552

Query: 487 LRFLRFYGDK--NKCMVSHLEGVPFA-EVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTK 541
           LRFLR Y  +      V   EG+ F   +R L+W + P K+L+     E LV L    +K
Sbjct: 553 LRFLRVYKSRVDGNDRVHIPEGMEFPHRLRLLDWEEYPRKSLHPTFHPEYLVELNFENSK 612

Query: 542 VEQLW----------------------------------------DDVQRLPSSLC---- 557
           +E+LW                                        + ++ +PSS      
Sbjct: 613 LEKLWEGREVLTNLKKINLALSRNLKKLPDLTYATNLEELSLLRCESLEAIPSSFSHLHK 672

Query: 558 ----TFKTPITFEII---------------DCKMLERLPDELENLEYLTVKGTTIRELPE 598
                  + I+ E+I                C  L  +P    N+  L +  T +  LP 
Sbjct: 673 LHRLLMNSCISIEVIPAHMNLASLEQVSMAGCSSLRNIPLMSTNITNLYISDTEVEYLPA 732

Query: 599 SLGRLSWVKRLILSNNSN--------------------LERIPESIRHLSKLTFLFISHC 638
           S+G  S ++ L ++ N N                    +ERIP+ I+ L +L  L +S C
Sbjct: 733 SIGLCSRLEFLHITRNRNFKGLSHLPTSLRTLNLRGTDIERIPDCIKDLHRLETLDLSEC 792

Query: 639 ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG 698
            +L +LPELP +L  L AR+C SLE +   +++ ++   ++  N  KL    L   ++  
Sbjct: 793 RKLASLPELPGSLSSLMARDCESLETVFCPMNTPNT--RIDFTNCFKLCQEALRASIQQS 850

Query: 699 WMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPP 741
           +                 PG E+P  F H++ G+S T+   PP
Sbjct: 851 FF----------LVDALLPGREMPAVFDHRAKGNSLTI---PP 880


>gi|10177708|dbj|BAB11082.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1145

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 369/735 (50%), Gaps = 80/735 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG D R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGGDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKDSRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           IFS+ YASS W                   FY VDPS VR Q   FG+ F +  KR  E+
Sbjct: 71  IFSKNYASSSWCLNELLEIVNCNDKIVIPVFYGVDPSQVRHQIGDFGKIFEKTCKRQTEQ 130

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K +WK ALT+ A++ GFDS     E+K+IEEIANDVL +L  T     +  VG+E  I 
Sbjct: 131 VKNQWKKALTDVANMLGFDSATWDDEAKMIEEIANDVLAKLLLTTPKDFENFVGIEDHIA 190

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVREAEE 216
            +  LL + +E V  + IWG  GI K TIA A+FN++SRHF  S      F    RE   
Sbjct: 191 NMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSREIFS 250

Query: 217 TGGIKD------LQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
                D      LQ+KLLSE+ +  D  + ++     RL  +KV I+ DD+         
Sbjct: 251 RANPDDHNMKLHLQEKLLSEILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVILDSL 310

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+I  T +K  L+    +  Y +       A  + CQ AF         
Sbjct: 311 VGQTQWFGSGSRIIAVTNNKHFLRAHEIDHIYEVSLPTQQHALAMLCQSAFRKKSPPEGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL- 371
             L  +  ++   +PL L VLG YL GR KE W   + +LE   H +IE++L+ISYD L 
Sbjct: 371 EMLVVQVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRLENGLHDKIEKILRISYDGLG 430

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD------ASKSLINLDLFYR----IRMHDLLRD 421
            +  K +F  IAC         + S+          K+L++  + +     + MH +L++
Sbjct: 431 SEEDKAIFRHIACLFNHMEVTTITSLLTDLGINIGLKNLVDKSIIHVRRGCVEMHRMLQE 490

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGR+IVR +SI+ PGKR  L    DI  VL +  GT+ + GISL+  +++ E++++  AF
Sbjct: 491 MGRKIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISLNTGEID-ELYVHESAF 549

Query: 482 SKMPKLRFLRF----YGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             M  LRFL      +G   +  +   L+ +P   ++ L WP  P++ +  N   E LV+
Sbjct: 550 KGMSNLRFLEIDSKNFGKAGRLYLPESLDYLP-PRLKLLCWPNFPMRCMPSNFRPENLVT 608

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GT 591
           LKMP +K+ +LW+ V    +SL   K     +++    L+ +PD     NLE L +    
Sbjct: 609 LKMPNSKLHKLWEGV----ASLTCLK---EMDMVGSSNLKEIPDLSMPTNLEILKLGFCK 661

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ ELP S+  L+ + +L +    +LE +P    +L  L  L   +C  L+T PE   N+
Sbjct: 662 SLVELPSSIRNLNKLLKLDMEFCHSLEILPTGF-NLKSLDHLNFRYCSELRTFPEFSTNI 720

Query: 652 GLLSARNCTSLEKLP 666
            +L     T++E+ P
Sbjct: 721 SVLMLFG-TNIEEFP 734



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 48/232 (20%)

Query: 573 LERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           LE L   L++L+   +   ++ ELP S   L+ +K L ++   NLE +P  I +L  L +
Sbjct: 764 LEMLSPTLKSLKLENIP--SLVELPSSFQNLNQLKELSITYCRNLETLPTGI-NLKSLNY 820

Query: 633 LFISHCERLQTLPELPCNLGLL-----------------------SARNCTSLEKLPAGL 669
           L    C +L++ PE+  N+ +L                       + R+C+ L+ L   +
Sbjct: 821 LCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNI 880

Query: 670 SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS---------------------LYEER 708
             M ++  V+  +   L    LS    D   +                       L++E 
Sbjct: 881 PKMKTLWDVDFSDCAALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPETVLHQES 940

Query: 709 GIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK-LISFAFCAVVV 759
            I  SM FPG ++P +F +++ G+S  L   P  P   ++    F  CAV  
Sbjct: 941 VIFNSMAFPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRVCAVAT 992


>gi|357499343|ref|XP_003619960.1| Resistance protein [Medicago truncatula]
 gi|355494975|gb|AES76178.1| Resistance protein [Medicago truncatula]
          Length = 1180

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 257/776 (33%), Positives = 399/776 (51%), Gaps = 105/776 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TF DD +L RGD I QSL   IE S I I 
Sbjct: 16  YQVFLSFRGADTRYEFTGNLYKALTDKGIHTFFDDRELQRGDKIEQSLNNAIEESRIFIP 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDP  +R Q  S+  H ++  KRF
Sbjct: 76  VFSANYASSSFCLDELVHIIRVYKEKGRLVLPVFYGVDPGDIRHQRGSYAIHLTKHEKRF 135

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKG 152
                  EK+ +WK AL +AADLSGF  ++    E K I EI  +V  +++       K 
Sbjct: 136 GNNKENMEKLLQWKKALKQAADLSGFHFSLGNGYEYKRIGEIIRNVTNQINRVSLHVAKY 195

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG++  +++++SLL   S+ V  +  ++GIGG+ K T+A A FN I+  FE   F  NV
Sbjct: 196 PVGLQSRVQQVKSLLDNESDDVVHMVGLYGIGGLGKSTLAKATFNSIADKFEVFCFLENV 255

Query: 212 REAEETGGIKDLQ-----KKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
           RE     G+++LQ     K +  E+   G  + I+   +RL RKKV ++ DD+       
Sbjct: 256 RENSAKHGLENLQEQLLLKTIGEEIKLGGVSQGIQIIKDRLRRKKVLLILDDIDKLEQLD 315

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSRVIITTRDKQ+L N      Y ++ L   +A +L    AF  + + +
Sbjct: 316 ALAGGFDWFGNGSRVIITTRDKQLLTNHEIELMYEVEGLYGTEALELLRWMAFKNNKVPS 375

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+  + ++A+ YA G+PL L+++G  L G+S ++W+ A+   E IP  +I+E+L++SYD+
Sbjct: 376 SYEHILNRAVSYASGLPLVLEIVGSNLFGKSIQIWKGALDGYERIPDKKIQEILRVSYDA 435

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDL----FYR 412
           L++ Q++VFLDIAC  +    +E   I                A KSLI +      +  
Sbjct: 436 LEEEQQSVFLDIACCFKEHSWEEFEDILRTHYGHCIKHHVQVLAEKSLIVISRSKWGYIY 495

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + +HDL++DMG+E+VR++S   PG+R+RLW H DI  VL+ NTGT  +E + ++      
Sbjct: 496 VTLHDLIKDMGKEVVRQQSSKEPGERSRLWCHNDIIHVLQGNTGTSKVEMLYMNFPSKKT 555

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            I  N  AF KM  L+ L     K        E +P + +R L+W + P  +L  +I  +
Sbjct: 556 VIDWNGKAFMKMTNLKTLII---KKGHFSKGPEYLP-SSLRVLKWDRYPSDSLSSSILNK 611

Query: 531 KLVSLKM----PCTKVEQLWDDVQRLP----------SSLCTFKTPITF----EII---D 569
           K  ++K+     C  +  +  DV  LP           +L T    I +    EI+   +
Sbjct: 612 KFENMKVFSLDKCQHLTHI-PDVSCLPILEKFSFKKCRNLITIDISIGYLDKLEILNAEN 670

Query: 570 CKMLERLPD-ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
           C  LE  P   L +L+ L + G  +++  P+ L  ++ +K + L + S +  +P S R+L
Sbjct: 671 CSKLESFPPLRLPSLKDLKLSGCKSLKSFPKLLCEMTKIKGICLYDTS-IGELPSSFRNL 729

Query: 628 SKLTFLFISHCERLQ---TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           ++L +L I    +L+    +  +P  +  +SA  C  L  LP     M+S ++ N+
Sbjct: 730 NELHYLQIFGDGKLKISSNIFAMPNKINSISASGCNLL--LPKDNDKMNSEMFSNV 783


>gi|334185068|ref|NP_187072.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332640533|gb|AEE74054.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 867

 Score =  323 bits (827), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 239/768 (31%), Positives = 384/768 (50%), Gaps = 101/768 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED R +F SH+      + I  F+D+ + RG++I   L+  I  S IAII+
Sbjct: 63  YDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNNIKRGESIGPELIRAIRGSKIAIIL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
            S+ YASS W                      FY+VDPS V+K +  FG+ F +  + + 
Sbjct: 123 LSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYKVDPSLVKKLTGDFGKVFRNTCKGKE 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ A  + A ++G+DS     ES +IE+I +D+ + L+ +  S++   L+G+  
Sbjct: 183 RENIERWREAFKKVATIAGYDSRKWDNESGMIEKIVSDISEMLNHSTPSRDFDDLIGMGD 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E+++ LL I S+ +  + IWG  G+ K TIA +++N+ S  F+ S F  +++ A    
Sbjct: 243 HMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTIP 302

Query: 219 GIKD-------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS-------- 261
              D       LQ++ LS+++   N++  ++     RL  KKV +V DDV          
Sbjct: 303 ACSDDYYEKLQLQQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDALA 362

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+D+ +L+       Y +    Y +A ++FC  AFG         
Sbjct: 363 KENDWLGPGSRIIITTQDRGILRAHGIEHIYEVDYPNYEEALQIFCMHAFGQKSPYDGFE 422

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL  +    +  +PL LKV+G Y  G +K+ W  A+ ++      +IE +LK+SYD+L D
Sbjct: 423 ELAQQVTTLSGRLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIESILKLSYDALCD 482

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
             K++FL +AC    +  + V                  A KSLI++DL   IRMH LL 
Sbjct: 483 VDKSLFLHLACSFHNDDTELVEQQLGKKFSDLRQGLHVLAEKSLIHMDLRL-IRMHVLLA 541

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +GREIVRK+SI+ PG+R  L    DI +VL  +TG+ ++ GI  D N + +E+ ++  A
Sbjct: 542 QLGREIVRKQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKELDISEKA 601

Query: 481 FSKMPKLRFLRFYGDK-NKCMVSHLEG----VPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
           F  M  L+F+R YGD  ++  V +  G    V       L +P    + L+    KL   
Sbjct: 602 FRGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFP----RGLDYLPGKL--- 654

Query: 536 KMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLPD- 578
               +K+E+LW+ +Q L +                 L T        I  C  L +LP  
Sbjct: 655 ----SKLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERCSSLVKLPSS 710

Query: 579 --ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
             E  NL+ + ++   ++ ELP S G L+ ++ L L   S+L  +P S  +L+ +  L  
Sbjct: 711 IGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEF 770

Query: 636 SHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
             C  L  LP       NL +L  R C+S+ +LP+   +++++  +NL
Sbjct: 771 YECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQVLNL 818


>gi|356559294|ref|XP_003547935.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1075

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 264/754 (35%), Positives = 381/754 (50%), Gaps = 112/754 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L  K I+TFIDD +L RG+ I+ +L+  I+ S +AI 
Sbjct: 14  YDVFLSFRGEDTRLGFTGHLYKALHDKGIRTFIDDAELQRGEEITPALMKAIQDSRVAIT 73

Query: 61  IFSERYASSRW-------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF-- 99
           + SE YASS +                    FY+VDPS VR Q  S+    ++L  +F  
Sbjct: 74  VLSEDYASSSFCLDELATILDQRKRLMVIPVFYKVDPSDVRNQRGSYEDALAKLEGKFQH 133

Query: 100 -PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            PEK+++WK AL + A+LSG+        E + IE+I   V   +           VG+E
Sbjct: 134 DPEKLQKWKMALKQVANLSGYHFKEGDGYEFEFIEKIVEQVSGVISLGPLHVADYPVGLE 193

Query: 158 CSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNK--ISRHFEGSYFALNVREA 214
             +  + SLL  GS+ GV  + I G+GGI K T+A AV+N+  I+  F+G  F  NVRE 
Sbjct: 194 SRVLHVRSLLDAGSDDGVHMIGIHGMGGIGKSTLARAVYNELIIAEKFDGLCFLANVREN 253

Query: 215 EETGGIKDLQKKLLSEL---------SKDGNMRNIESQLNRLARKKVRIVFDDVTS---- 261
            +  G++ LQ+KLL E+         SK+  +  IES   RL  KK+ ++ DDV      
Sbjct: 254 SDKHGLERLQEKLLLEILGEKNISLTSKEQGIPIIES---RLTGKKILLILDDVDKREQL 310

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GS++IITTRDKQ+L +    KKY +KEL   DA +L    AF  +   
Sbjct: 311 QAIAGRPGWFGPGSKIIITTRDKQLLTSHEVYKKYELKELDEKDALQLLTWEAFKKEKAC 370

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
            +++E+  + + YA G+PL LKV+G +L G+S + WESA+++ + IP  EI ++L++S+D
Sbjct: 371 PTYVEVLHRVVTYASGLPLVLKVIGSHLVGKSIQEWESAIKQYKRIPKKEILDILRVSFD 430

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRI-R 414
           +L++ +K VFLDIAC  +G    EV  I                  KSLI +  +  +  
Sbjct: 431 ALEEEEKKVFLDIACCFKGWRLKEVEHILRDGYDDCMKHHIGVLVGKSLIKVSGWDDVVN 490

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE- 473
           MHDL++DMG+ I  +ES   PGKR RLW  KDI +VL+ N+G+  IE I LD++   +E 
Sbjct: 491 MHDLIQDMGKRI-DQESSEDPGKRRRLWLTKDIIEVLEGNSGSREIEMICLDLSLSEKEA 549

Query: 474 -IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE-VRHLEWPQCPLKTL--NICA 529
            I     AF KM  L+ L     K     ++     F E +R LEW + P   L  N   
Sbjct: 550 TIEWEGDAFKKMKNLKILIIRNGKFSKGPNY-----FPESLRLLEWHRYPSNCLPSNFPP 604

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           ++L   K+P + +            S   F+     +   C+ L  + D  +L NLE L+
Sbjct: 605 KELAICKLPQSCITSF-----GFHGSRKKFRNLKVLKFNKCEFLTEIHDVSDLPNLEELS 659

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
             G                         NL  +  SI  LSKL  L  + C +L T P L
Sbjct: 660 FDGC-----------------------GNLITVHHSIGFLSKLKILNATGCRKLTTFPPL 696

Query: 648 P-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
              +L  L   +C+SLE  P  L  M ++  + L
Sbjct: 697 NLTSLETLQLSSCSSLENFPEILGEMKNLTSLKL 730


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 242/781 (30%), Positives = 406/781 (51%), Gaps = 104/781 (13%)

Query: 2   YDVFLSFRGEDTRDN------FTSHLHHVLSLKSIKTFID--DQLIRGDNISQSLLGTIE 53
           YDVFLS R +D R N      F S LH  L+ + I  FID  D+   G  +++ +   ++
Sbjct: 33  YDVFLSHRAKDHRANNDTGRSFISDLHEALTSQGIVVFIDKEDEEDGGKPLTEKM-KAVD 91

Query: 54  ASCIAIIIFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRH 91
            S  +I++FSE Y S  W                       FY+VDP  VRKQ       
Sbjct: 92  ESRSSIVVFSENYGS--WVCMKEIRKIRMCQKLRDQLVLPIFYKVDPGDVRKQEGESLVK 149

Query: 92  FSRLRKRFP----EKMKRWKNALTEAADLSGF---DSNV-------IRPESKLIEEIAND 137
           F    +  P    E++K+W+ ++ +  +LSG+   DS +          E   I+EI N 
Sbjct: 150 FFNEHEANPNISIEEVKKWRKSMNKVGNLSGWHLQDSQLNITFKQFCSSEEGAIKEIVNH 209

Query: 138 VLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNK 197
           V  +L       +  LVG+   + +I  LL IG + +  + IWG+GGI K T+A  ++  
Sbjct: 210 VFNKLRPDLFRYDDKLVGISQRLHQINMLLGIGLDDIRFVGIWGMGGIGKTTLARIIYRS 269

Query: 198 ISRHFEGSYFALNVREAEETGGIKDLQKKLLSE--LSKDGNMRNIESQL---NRLARKKV 252
           +S  F+G YF  NV+EA +  GI  LQ+KLL+   + ++ ++ N +       R++  K 
Sbjct: 270 VSHLFDGCYFLDNVKEALKKQGIASLQEKLLTGALMKRNIDIPNADGATLIKRRISNIKA 329

Query: 253 RIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHK 296
            I+ DDV                 SGSR+I+TTR++ +L +    K+Y+++ L   +A +
Sbjct: 330 LIILDDVDHLSQLQQLAGSSDWFGSGSRIIVTTRNEHLLVSHGIEKRYKVEGLNVEEALQ 389

Query: 297 LFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIP 356
           LF Q AFG ++    + +L+ + ++Y+  +PLA++VLG  L  +S+EVW++A+ KL+ I 
Sbjct: 390 LFSQKAFGTNYPKKDYFDLSIQVVEYSGDLPLAIEVLGSSLRDKSREVWKNAVEKLKEIR 449

Query: 357 HVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--SKSLINLDLF---- 410
             +I E+L++SYD LD S+K +FLD+ACF + + + + I +  +   +++I L++     
Sbjct: 450 DKKILEILRVSYDLLDKSEKEIFLDLACFFKKKSKKQAIEVLQSFGFQAIIGLEILEERS 509

Query: 411 ------YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGIS 464
                  +I+MHDL+++MG+E+VR+   N+P KR RLW  +D+   L  + G EAIEGI 
Sbjct: 510 LITTPHEKIQMHDLIQEMGQEVVRRMFPNNPEKRTRLWLREDVNLALSHDQGAEAIEGIV 569

Query: 465 LDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT 524
           +D ++   E H+N+  FS M  LR L+     N  +   L+ +   ++R L W   P K 
Sbjct: 570 MDSSE-EGESHLNAKVFSTMTNLRILKI---NNVSLCGELDYLS-DQLRFLSWHGYPSKY 624

Query: 525 L--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
           L  N   + ++ L++P + +  LW   +RL           T  + D + + + PD   +
Sbjct: 625 LPPNFHPKSILELELPNSFIHYLWKGSKRL-------DRLKTVNLSDSQFISKTPDFSGV 677

Query: 581 ENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L + G   + +L +SLG L  + +L L N   L+ IP SI  L  L  L +S+C 
Sbjct: 678 PNLERLILSGCVRLTKLHQSLGSLKRLIQLDLKNCKALKAIPFSIS-LESLIVLSLSNCS 736

Query: 640 RLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL---CNFLKLDPNELSEI 694
            L+  P +  N+  L+  +   TS+++L   +  ++ ++ +NL    N L+L PN +  +
Sbjct: 737 SLKNFPNIVGNMKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLEL-PNTIGSL 795

Query: 695 V 695
           +
Sbjct: 796 I 796



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 8/88 (9%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++P++L  L  ++ L LS NS    +P+S+ HL  L  L++ +C+RLQ LP+LP ++  +
Sbjct: 902 DIPDNLQSLPSLEILDLSGNS-FSFLPKSVEHLVNLRTLYLVNCKRLQELPKLPLSVRSV 960

Query: 655 SARNCTSL-------EKLPAGLSSMSSV 675
            AR+C SL       +++P+  + M+ +
Sbjct: 961 EARDCVSLKEYYNQEKQMPSSSTGMAVI 988


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 248/796 (31%), Positives = 397/796 (49%), Gaps = 122/796 (15%)

Query: 2   YDVFLSFRGEDTRDN------FTSHLHHVLSLKSIKTFID--DQLIRGDNISQSLLGTIE 53
           YDVFLS R +D R N      F S LH  L+ + I  FID  D+   G  +++ +   ++
Sbjct: 34  YDVFLSHRAKDHRANNDTGRSFISDLHEALTSQGIVVFIDKEDEEDGGKPLTEKM-KAVD 92

Query: 54  ASCIAIIIFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRH 91
            S  +I++FSE Y S  W                       FY+VDP  VRKQ       
Sbjct: 93  ESRSSIVVFSENYGS--WVCMKEIRKIRMCQKSRDQLVLPIFYKVDPGDVRKQEGESLVK 150

Query: 92  FSRLRKRFP----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ 147
           F    +  P    E++K+W+ ++ +  +LSG+     + E  +I+E+ + +  +L     
Sbjct: 151 FFNEHEANPNISIEEVKKWRKSMNKVGNLSGWHLQDSQFEEGIIKEVVDHIFNKLRPDLF 210

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
             +  LVG+   + EI  L+ IG + V  + IWG+ GI K TIA  ++  +S  F+G YF
Sbjct: 211 RYDDKLVGISRRLHEINKLMGIGLDDVRFIGIWGMSGIGKTTIARIIYKSVSHLFDGCYF 270

Query: 208 ALNVREAEETGGIKDLQKKLLSE--LSKDGNMRNIESQL---NRLARKKVRIVFDDVT-- 260
             NV+EA +  GI  LQ+KLL+   + ++ ++ N +       R++  K  I+ DDV   
Sbjct: 271 LDNVKEALKKEGIASLQQKLLTGALMKRNIDIPNADGATLIKRRISNIKALIILDDVDNV 330

Query: 261 --------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                         SGSRVI+TT+ + +L +    ++Y ++ L   +  +LF Q AFG D
Sbjct: 331 SQLRQLAGSLDWFGSGSRVIVTTKHEDILVSHGIERRYNVEVLKIDEGIQLFSQKAFGED 390

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
           +    + +L  + + YA G+PLA++VLG  L  +  E W  A++KL  +   EI E LKI
Sbjct: 391 YPKEGYFDLCSQVVDYAGGLPLAIEVLGSSLRNKPMEDWIDAVKKLWEVRDKEINEKLKI 450

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--SKSLINLDLFY----------RIR 414
           SY  L++  + +FLDIACF + + +   I I ++    +++ LD+            +I+
Sbjct: 451 SYYMLENDDREIFLDIACFFKRKSKRRAIEILESFGFPAVLGLDILKEKSLITTPHEKIQ 510

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDL+++MG++IV +E  + P KR+RLW  +DI + L ++ GTE IEGI +D+++   E 
Sbjct: 511 MHDLIQEMGQKIVNEEFPDEPEKRSRLWLREDINRALSRDQGTEEIEGIMMDLDE-EGES 569

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           H+N+ +FS M  LR L+     N  +   +E +   ++R L W   PLKTL  N     L
Sbjct: 570 HLNAKSFSSMTNLRVLKL---NNVHLCEEIEYLS-DQLRFLNWHGYPLKTLPSNFNPTNL 625

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEII---DCKMLERLPD--ELENLEYLT 587
           + L++P + +  LW           T K+  T ++I   D + L + PD   + NLE L 
Sbjct: 626 LELELPNSSIHLLW----------TTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLV 675

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           + G   + +L  SLG L  + +L L N   L  IP +I  L  L  L +S C  L   P+
Sbjct: 676 LSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNI-CLESLKILVLSGCSSLTHFPK 734

Query: 647 LPCNLG--------------------------LLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           +  N+                           +L+ +NCT+L KLP+ + S++S+  +NL
Sbjct: 735 ISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNL 794

Query: 681 CNFLKLD--PNELSEI 694
               KLD  P  L  I
Sbjct: 795 NGCSKLDSLPESLGNI 810


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 295/933 (31%), Positives = 449/933 (48%), Gaps = 153/933 (16%)

Query: 28  KSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW--------------- 71
           + I  ++DD +L RG  I  +L   IE S  ++IIFS  YASS W               
Sbjct: 22  RGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRDYASSPWCLDELVKIVQCMKEM 81

Query: 72  ------FFYRVDPSHV----RKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDS 121
                  FY VDPS V    RK   +F  H    ++   E+++ WK+ L+  A+LSG+D 
Sbjct: 82  GQTVLPVFYDVDPSEVIERKRKYEEAFVEHEQNFKENL-EQVRNWKDCLSTVANLSGWDI 140

Query: 122 NVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWG 181
              R ES+ I+ IA  +  +L  T  + +K LVG++  +E +   +         + I G
Sbjct: 141 RN-RNESESIKRIAKYISYKLSVTLPTISKKLVGIDSRVEVLNGFIGEEVGEAIFIGICG 199

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSEL-----SKDG 235
           +GGI K TIA  V++     F+GS F  NVR+   E GG + LQ++LLSE+     S   
Sbjct: 200 MGGIGKTTIARVVYDSFRWQFKGSCFLANVRDVFAEKGGPRRLQEQLLSEILMERASVCD 259

Query: 236 NMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCW 279
           + R IE    RL  KK+ ++ DDV                  GSR+IIT+RDK V     
Sbjct: 260 SYRGIEMIKRRLRLKKILLILDDVNDKKQLEFLAAEPGWFGPGSRIIITSRDKNVFTGND 319

Query: 280 ANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCG 339
             K Y  ++L   DA  LF Q AF  D      ++L+ + + YA G+PLAL+V+G +L G
Sbjct: 320 DTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVKLSKQVVGYANGLPLALEVIGSFLYG 379

Query: 340 RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD 399
           R    W  A+ ++  IP  EI +VL +S+D L + +K +FLDIACFL+G   D +  I D
Sbjct: 380 RRIPEWRGAINRMNEIPDDEIIKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILD 439

Query: 400 A--------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHK 445
                           +SLI++    ++ MH+LL+ MG+EI+R+ES + PG+R+RLW ++
Sbjct: 440 GWRGFHTGIGIPVLIERSLISVSR-DQVWMHNLLQKMGQEIIRRESPDEPGRRSRLWTYE 498

Query: 446 DIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLE 505
           D+   L  NTG E IE I LDM  + +E   N  AFSKM +LR L+     N  +    E
Sbjct: 499 DVCLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSRLRLLKI---DNMQLSEGPE 554

Query: 506 GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI 563
            +    +R LEW   P K+L   +  ++LV L M  + +EQLW             K+ +
Sbjct: 555 DLS-NNLRFLEWHSYPSKSLPAGLQVDELVELHMANSNLEQLWYGC----------KSAV 603

Query: 564 TFEIIDCK---MLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
             +II+      L + PD   + NLE L ++G T++ E+  SLGR   ++ + L N  ++
Sbjct: 604 KLKIINLNNSLYLSKTPDLTGIPNLESLILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSI 663

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------------------------- 652
             +P ++  +  L F  +  C +L+  P++  N+                          
Sbjct: 664 RILPSNL-EMESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGL 722

Query: 653 -LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
            +LS  NC +LE +P+ +  + S+  ++L      D +EL  I ++     SL E  G+ 
Sbjct: 723 EVLSMNNCRNLESIPSSIGCLKSLKKLDLS-----DCSELQNIPQNLGKVESL-EFDGLS 776

Query: 712 K-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKY 766
                  +  PGNEIP WF HQS GSS +++  P    G+  +   AF A    P+   +
Sbjct: 777 NPRPGFGIAIPGNEIPGWFNHQSKGSSISVQV-PSWSMGF--VACVAFSANDESPSLFCH 833

Query: 767 FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPN 826
           F  K+ E +   +   + C      +GHL+           SDH++L   SF        
Sbjct: 834 F--KANERENYPSPMCISC------KGHLF-----------SDHIWLFYLSFDYLKELQE 874

Query: 827 YDEFSF-RIHCSFHFPPYLERG-EVKKCGIHFV 857
           +   SF  I  SF      E G +VK CG+ F+
Sbjct: 875 WQHASFSNIELSFQSS---EPGVKVKNCGVCFL 904


>gi|227438175|gb|ACP30577.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1235

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 246/778 (31%), Positives = 391/778 (50%), Gaps = 103/778 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R +F SH+      K I  FID+++ R D+I   L+  I  S IAII+
Sbjct: 72  HHVFPSFRGEDVRKDFLSHIQMEFQRKGITPFIDNEIKRRDDIGPELIRAIRGSKIAIIL 131

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS+W                      FYRVDPS V+K +  FGR F +    R 
Sbjct: 132 LSRNYASSKWCLDELVEIMKCREELGQTVMAIFYRVDPSDVKKLAGDFGRVFKKTCAGRT 191

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G+ S+    E+ +I++IA D+   L+    S +  GLVG+  
Sbjct: 192 KENIERWRQALAKVATIAGYHSSNWDNEAAMIKKIATDISDMLNNFTPSNDFDGLVGMGA 251

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF-----ALNVRE 213
            +E++E LLC+GS+ V  + IWG  GI K TIA   ++K+S +F+ S F     A   R 
Sbjct: 252 HLEKMEPLLCLGSDEVRMIGIWGPPGIGKTTIARVAYSKLSNNFQLSVFMDDLKANYTRL 311

Query: 214 AEETGGIK-DLQKKLLSELS--KDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +   +K  LQ++ +S+++  KD  + ++    NRL  KKV +V D V           
Sbjct: 312 CSDDYSLKLQLQQQFMSQITNQKDMVVSHLGVASNRLKDKKVLVVLDGVDQSVQLEAMAK 371

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IIT +D+++ +    N  Y++      +A ++FC ++FG         E
Sbjct: 372 ETWWFGPGSRIIITAQDQKLFRAHGVNLIYKVNFPTDDEALQIFCTYSFGQKSPKDGFEE 431

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +  + A  +PL L+V+G Y  G SK+ W +++ +L+     +I  +LK SYD+LDD 
Sbjct: 432 LAREVTRLAGELPLGLRVMGSYFRGMSKQEWTNSLPRLKTSLDSDIRSILKFSYDALDDE 491

Query: 375 QKNVFLDIAC-----------------FLEGEHRDEVISIFDASKSLINLDLFYRIRMHD 417
            K++FL IAC                 FLE   R  V+    A KSLI++D    I MH 
Sbjct: 492 DKDLFLHIACFFNSQEIHKVEEHLAKKFLEVRQRLNVL----AEKSLISIDSGV-ITMHS 546

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHM 476
           LL  +GREIV K+SI+ P  R  LW   +I++VL  + TG++++ GI L  N    +I +
Sbjct: 547 LLEKLGREIVCKQSIHEPRLRQFLWEETEIFEVLTGDTTGSKSVIGIKLKYNTEGEKIEI 606

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVS 534
           +  AF  M  L+FL+  G  +   ++        ++R L+W   P+  L   +  E LV 
Sbjct: 607 SEKAFEGMSNLQFLKVSGYSHPLQLTRGLNYISHKLRFLQWTHFPMTCLPSILNLEFLVE 666

Query: 535 LKMPCTKVEQLW-----------------DDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           L M  +K+E+LW                 ++++ LP    +  T +  ++ +C  L +LP
Sbjct: 667 LIMHTSKLEKLWEGTKPLRCLKWMDLSYSENLKELPD--LSTATNLELDLSNCSSLIKLP 724

Query: 578 DELEN-LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
               N LE L + G +++ E P  +     +++L L++  NL  +P  + + + L  L++
Sbjct: 725 YLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYPNLLELPSYVGNATNLDELYL 784

Query: 636 SHCERLQTLPELPCNLG------LLSARNCTSLEKLPAGLSSMS-SVLYVNLCNFLKL 686
           S+C     L ELP +LG       L  + C+ LE  P   +  S  +L +  C+ L L
Sbjct: 785 SNC---LDLVELPLSLGNLQKLKKLVLKGCSKLEVFPTNFNVESLEILCLAGCSSLDL 839



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 43/214 (20%)

Query: 569  DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILS---------------- 612
            DC ML+  P    N+  L + GT I ++P S+     ++ L +S                
Sbjct: 929  DCSMLKCFPQISTNIRDLDLTGTAIEQVPPSIRSWPRLEDLTMSYFENLKEFPHALERIT 988

Query: 613  ----NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
                 +++++ +P  ++ +S L    +  C +L ++P +  ++  L A +C SLE L   
Sbjct: 989  ELCLTDTDIQELPPWVKQISCLNSFVLKGCRKLVSIPPISDSIRFLDASDCESLEILECS 1048

Query: 669  LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ 728
              +  S L  N  N  KL+      I+++              +    PG ++P +F H+
Sbjct: 1049 FHNQISRL--NFANCFKLNQEARDLIIQNS-------------REAVLPGGQVPAYFTHR 1093

Query: 729  SMGS---SATLKTRPPRPAGYNKLISFAFCAVVV 759
            + G    S  L  +P       K + F  C ++V
Sbjct: 1094 ATGGGPLSIKLNEKP-----LPKSLRFKACILLV 1122


>gi|15238104|ref|NP_198969.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178008|dbj|BAB11460.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007307|gb|AED94690.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1038

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 279/1010 (27%), Positives = 454/1010 (44%), Gaps = 193/1010 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL    ++K I  F D ++ RG  I   L+  I  S +++++
Sbjct: 11  YHVFPSFHGSDVRRKFLSHLRFHFAIKGIVAFKDQEIERGQRIGPELVQAIRESRVSLVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ Y SS W                      FY +DPS VRKQS  FG+ F +    + 
Sbjct: 71  LSKNYPSSSWCLDELVEILKCKEDQEQIVMPIFYEIDPSDVRKQSGDFGKAFGKTCVGKT 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E  +RW NALTEAA++ G  S     E+++IE+I  DV  +L+       + +VG++  
Sbjct: 131 KEVKQRWTNALTEAANIGGEHSLNWTDEAEMIEKIVADVSNKLNVIPSRDFEEMVGLDAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + +++SLLC+ S+ V  + IWG  GI K TIA A++N++S +F+   F  N++ + ++ G
Sbjct: 191 LRKLDSLLCLNSDEVKMIGIWGPAGIGKTTIARALYNQLSTNFQFKCFMGNLKGSYKSIG 250

Query: 220 IK------DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT----------- 260
           +       +LQ +LLS++    +++  ++    + L  KKV IV DDV            
Sbjct: 251 VDNYDWKLNLQNQLLSKILNQNDVKTDHLGGIKDWLEDKKVLIVIDDVDDLEQLLALAKE 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKK--YRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                SGSR+I+TT+DK ++K    N    Y +       A ++ C  AF          
Sbjct: 311 PSWFGSGSRIIVTTKDKTIMKTLLVNDNNFYHVGYPTNKVALEILCLSAFQKSFPRDGFE 370

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL  K       +PL L V+G  L G+SK  W+    +LE     +IE+VLK +Y+ L  
Sbjct: 371 ELARKVAYLCGNLPLCLSVVGSSLRGQSKHRWKLQSDRLETSLDRKIEDVLKSAYEKLSK 430

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
            ++ +FL IACF    +   V ++               A K L+++    RI MH LL+
Sbjct: 431 KEQVLFLHIACFFNNTYISVVKTLLADSNLDVRNGLKTLADKCLVHISRVDRIFMHPLLQ 490

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +GR IV ++S + P KR  L   ++I  VL   TGT ++ GIS DM+KV+ E  ++  A
Sbjct: 491 QLGRYIVLEQS-DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVS-EFSISGRA 548

Query: 481 FSKMPKLRFLRFY--GDKNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSL 535
           F  M  LRFLR Y      K  +  +E + +   +R L W   P K+L      E+LV L
Sbjct: 549 FEAMRNLRFLRIYRRSSSKKVTLRIVEDMKYLPRLRLLHWEHYPRKSLPRRFQPERLVVL 608

Query: 536 KMPCTKVEQLWDDVQ----------------------------------------RLPSS 555
            MP + +E+LW  +Q                                         LPSS
Sbjct: 609 HMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIPNLSNATNLETLTLIKCSSLVELPSS 668

Query: 556 LCTFKTPITFEIIDCKMLE-----------------------RLPDELENLEYLTVKGTT 592
           +   +      +  CKML+                         PD   N++ L V  T 
Sbjct: 669 ISNLQKLKALMMFGCKMLKVVPTNINLVSLEKVSMTLCSQLSSFPDISRNIKSLDVGKTK 728

Query: 593 IRELP-----------------ESLGRLSWVK---RLILSNNSNLERIPESIRHLSKLTF 632
           I E+P                  SL RL++V     ++  + S++E IP+ +  L++L  
Sbjct: 729 IEEVPPSVVKYWSRLDQLSLECRSLKRLTYVPPSITMLSLSFSDIETIPDCVIRLTRLRT 788

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           L I  C +L +LP LP +L  L A +C SLE++ +  + +  +++ N    LKLD     
Sbjct: 789 LTIKCCRKLVSLPGLPPSLEFLCANHCRSLERVHSFHNPVKLLIFHNC---LKLDEKARR 845

Query: 693 EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
            I           +++ ++  ++ PG ++P  F H++ G+S T+   P  P      +S 
Sbjct: 846 AI-----------KQQRVEGYIWLPGKKVPAEFTHKATGNSITI---PLAPVAGTFSVSS 891

Query: 753 AFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWF----LGKISYVES 808
            F A ++F          S  +D+  N   + C  + K    +  ++    + + S + +
Sbjct: 892 RFKACLLF----------SPIEDFPTN--DITCRLRIKGGVQINKFYHRVVILESSKIRT 939

Query: 809 DHVFLGCNSFGGEYFGPNY--DEFSFRIHCSFHFPPYLERGEVKKCGIHF 856
           +H+F+       E  G +    E  F+  C        ++ ++ +CG+  
Sbjct: 940 EHLFIFYGDLFSEKIGVDVSTSEILFKFSCR-------DKHKIIECGVQI 982


>gi|297805566|ref|XP_002870667.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316503|gb|EFH46926.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 242/737 (32%), Positives = 375/737 (50%), Gaps = 101/737 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH+    K I TF D ++ RG  I   L+  I  S ++I++
Sbjct: 15  YHVFSSFHGPDVRSGFLSHLHNHFESKGITTFNDQEIERGHTIGPELVQAIRESRVSIVV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE+YASS W                      FY+VDPS VRKQ   FG  F +  +   
Sbjct: 75  LSEKYASSGWCLDELVEILKCKEASGQAVMTIFYKVDPSDVRKQRGDFGYTFKKTCEGKT 134

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW  AL +AA ++G +S     E+++I++IA DV  +L+ T     +G+VG+E  
Sbjct: 135 EEVKQRWIKALNDAATIAGENSLNWANEAEMIQKIATDVSNKLNVTPSRDFEGMVGLEAH 194

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + +++S LC+ S+ V  + IWG  GI K T+A A+FN++S  F  S F +   +  +   
Sbjct: 195 LTKLDSFLCLESDDVKMIGIWGPAGIGKTTLARALFNQLSTRFRRSCF-MGTIDVNDYDS 253

Query: 220 IKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------------- 261
              LQ KLLS++    +MR  ++ +    L  ++V IV DDV                  
Sbjct: 254 KLCLQNKLLSKILNQKDMRVHHLGAIKEWLHDQRVLIVLDDVDDLEQLEVLAKETSWFGP 313

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+I+T +DK++LK    N  Y +      +A ++FC  AF          EL  K ++
Sbjct: 314 GSRIIVTLKDKKILKAHGINDIYHVDYPSEKEAFEIFCLSAFKQSSPQDGFEELARKVVE 373

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
               +PLAL+V+G    G S++ W   +  +E     +IE VL++ YD L +  +++FL 
Sbjct: 374 LCGNLPLALRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQSLFLH 433

Query: 382 IACFLEGEHRDEVI-----SIFD--------ASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF   +  D V      S+ D        A+KSL++ + +  I MH LL+ +GR++V 
Sbjct: 434 IACFFNHKSVDYVTTMLADSVLDVENGLNTLAAKSLVSTNGW--ITMHCLLQQLGRQVVL 491

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           ++    PGKR  L   K+I  VL   TGTE++ GIS D++K+   + ++  AF++M  L+
Sbjct: 492 QQ--GDPGKRQFLVEAKEIRDVLANETGTESVIGISFDISKI-EALSISKRAFNRMRNLK 548

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLW 546
           FL FY + N  ++  +E +P   +R L W   P K+L +    E LV L M  +K+E+LW
Sbjct: 549 FLNFY-NGNISLLEDMEYLP--RLRLLHWGSYPRKSLPLAFKPECLVELYMGSSKLEKLW 605

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
             +Q L +                  L+++     NL Y     + ++E+P +L + + +
Sbjct: 606 GGIQPLTN------------------LKKI-----NLGY----SSNLKEIP-NLSKATNL 637

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS-----ARNCTS 661
           K L L+   +L  IP SI +L KL  L+ S C +LQ    +P N+ L S       NC+ 
Sbjct: 638 KTLTLTGCESLVEIPSSILNLQKLEMLYASGCSKLQV---IPTNINLASLEEVNMSNCSR 694

Query: 662 LEKLPAGLSSMSSVLYV 678
           L   P  +SS    LYV
Sbjct: 695 LRSFP-DMSSNIKRLYV 710


>gi|255563220|ref|XP_002522613.1| hypothetical protein RCOM_0884420 [Ricinus communis]
 gi|223538089|gb|EEF39700.1| hypothetical protein RCOM_0884420 [Ricinus communis]
          Length = 708

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 223/600 (37%), Positives = 323/600 (53%), Gaps = 85/600 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR+ F SHL   L+ K I TF D+ L RG+ IS +LL TI  S ++++I
Sbjct: 13  YDVFLSFRGLDTRNAFLSHLFKALTEKQIITFKDENLDRGERISNTLLQTIRESYVSVVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA S W                      FY +DP+ V++ + S+G      RK F 
Sbjct: 73  FSKNYACSTWCLEELVTILQCNEEMGQVVLPVFYEIDPTEVQELTGSYGNALMNHRKEFE 132

Query: 101 E-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ------SKNKGL 153
           +  ++ W +AL +   ++GF S   +PESKLIEEI N V K+L+  F         + GL
Sbjct: 133 DCSVESWSHALKKVGAMAGFVSWDTKPESKLIEEIVNHVWKKLNQAFSYDHCDDGCDDGL 192

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+   I++IE +LC  S+GV  L IWG+GG               + +      + +  
Sbjct: 193 VGINSRIKDIEQILCRESKGVRILGIWGMGG---------------KEYSDQGMPIKISS 237

Query: 214 AEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQ 273
                 I  ++KK+L  L       N   Q++ L R +     D     S +I+T+RD+Q
Sbjct: 238 FSIKKWI--MRKKVLIVLDD----VNDSEQIDFLVRPR-----DIYGPESTIIMTSRDQQ 286

Query: 274 VLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVL 333
           +LK   A+  Y +KEL   +A KLF   AF G+    +  E+   A++Y +G PLALKVL
Sbjct: 287 ILKYGNADI-YEVKELNSDEAFKLFILHAFKGNPPAEALKEVARMAVEYGRGNPLALKVL 345

Query: 334 GCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDE 393
           G  L  +S E     ++KLE I   +I+ +L+IS+D LDD +K +FLDIACF + E ++E
Sbjct: 346 GSTLYDKSTEECRDHLKKLEDISDKKIQNILRISFDDLDDDEKEIFLDIACFFKWEDKNE 405

Query: 394 VISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNR 440
           V SI  +              KSLI +    +I MHDLL+ MGR+IVR+E I HP KR+R
Sbjct: 406 VESILSSFGRSAIIGIRVLQDKSLITVS-NKKIEMHDLLQQMGRDIVRQECIKHPEKRSR 464

Query: 441 LWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNK- 498
           LW  +DIY VL K+ G   ++E ISLDM+  +R++ ++S  F +M +L+FL+FY   +  
Sbjct: 465 LWISQDIYHVLTKDLGRSISVESISLDMSN-SRDMELSSTTFERMSRLKFLKFYSPYSHQ 523

Query: 499 ---------CMVSHLEGVPFA--EVRHLEWPQCPLK--TLNICAEKLVSLKMPCTKVEQL 545
                    C +S  +   F   E+R+L W + PL    LN C   LV L + C+ V+QL
Sbjct: 524 QELDAACKICNISLSKEFSFLPDELRYLYWYKYPLTCLPLNFCPNNLVQLHLICSHVQQL 583


>gi|297826151|ref|XP_002880958.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326797|gb|EFH57217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 986

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 266/899 (29%), Positives = 414/899 (46%), Gaps = 167/899 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH++ + K I TF D+++ RG  I   L+  I  S ++I++
Sbjct: 12  YHVFSSFHGPDVRRGFLSHLHNLFASKGITTFNDEKIDRGQPIGPELVQAIRESRVSIVL 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S++YASS W                      FY V+PSHV+KQ   FG+ F +  +   
Sbjct: 72  LSKKYASSSWCLDELLEILKCKEDDGQILMTIFYDVNPSHVKKQRGEFGKAFEKTCQGKT 131

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW  AL   A ++G  S     E+++I++IA DVL +L+ T      G+VG+E  
Sbjct: 132 EELKQRWSKALAHVATIAGEHSLNWPYEAEMIQKIATDVLNKLNLTPSKDFDGMVGLEAH 191

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + ++ SLLC+ S+ V  + IWG  GI K TIA A+ N++S  F+   +  + RE +    
Sbjct: 192 LAKLNSLLCLESDEVKMIGIWGPAGIGKSTIARALNNQLSSSFQLKLWGTS-REHDSKLW 250

Query: 220 IKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------------- 261
              LQ  LLS++    NM+  ++ +   RL  ++V I+ DDV                  
Sbjct: 251 ---LQNHLLSKILNQENMKIHHLGAIKERLHDQRVLIILDDVDDLKKLEVLAEERSWFGF 307

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+I+TT DK++L+       Y +      +A ++ C  AF    +     E+ +K  +
Sbjct: 308 GSRIIVTTEDKKILEAHGIKDIYHVDFPSEEEALEILCLSAFKQSSVPDGFEEVANKVAE 367

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
               +PL L V+G  LCG SK+ WE  +  +E      IE++LK+ YD L    +++FL 
Sbjct: 368 LCGNLPLGLCVVGKSLCGESKQEWELQLSSIEASLDRGIEDILKVGYDRLTKKNQSLFLH 427

Query: 382 IACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF   E  D V ++               A KSL++   +  I MH LL+ +GR+IV 
Sbjct: 428 IACFFNYEKVDYVTTMLADSNLDVRNGLKTLADKSLVHKSTYGHIVMHHLLQQLGRQIVH 487

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           ++S + PGK   L    +I  VL   TGT ++ GIS D + +  E+ +   AF  M  LR
Sbjct: 488 EQS-DEPGKHQFLTEADEICDVLTTETGTGSVLGISFDTSNIG-EVSVGKGAFEGMRNLR 545

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAEKLVSLKMPCTKVEQLW 546
           FL  Y    + +    +      +R L W   P K+L +    E+LV L+M  + +E+LW
Sbjct: 546 FLTIY----RSLQIPEDLDYLPLLRLLHWKYYPRKSLPLRFQPERLVKLRMRHSNLEKLW 601

Query: 547 DDVQ----------------------------------------RLPSSLCTFKTPITFE 566
             +Q                                         LPSS+   +      
Sbjct: 602 GGIQSLPNLKIIDLKLSSELKEIPNLSKSTNLEELTLEYCTSLVELPSSIKNLQKLKILN 661

Query: 567 IIDCKML------------ERL-----------PDELENLEYLTVKGTTIRELP------ 597
           +  C ML            ERL           PD   N+E+L +  T I ++P      
Sbjct: 662 VDYCSMLQVIPTNINLASLERLDMGGCSRLTTFPDISSNIEFLNLGDTDIEDVPPSAAGC 721

Query: 598 -----------ESLGRLSWVKRLILS---NNSNLERIPESIRHLSKLTFLFISHCERLQT 643
                       SL RL+ V   I +   + S++E IP+ +  L++L +L +  C +L++
Sbjct: 722 LSRLDHLNICSTSLKRLTHVPLFITNLVLDGSDIETIPDCVICLTRLEWLSVESCTKLES 781

Query: 644 LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS 703
           +P LP +L LL A NC SL+      S  +    ++  N  KLD     E  + G ++ S
Sbjct: 782 IPGLPPSLRLLEADNCVSLK----SFSFHNPTKRLSFRNCFKLD-----EEARRGIIQKS 832

Query: 704 LYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPA 762
           +Y+       +  PG +IP  F H++ G S T+   P  P   +    F  C +V+FP 
Sbjct: 833 IYD------YVCLPGKKIPAEFTHKATGRSITI---PLAPGTLSASSRFKAC-LVIFPV 881


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 252/803 (31%), Positives = 397/803 (49%), Gaps = 119/803 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR+ FT  L+  L  + ++ F+DD+ L RGD+I+ +LL  I+ S  +I+
Sbjct: 17  WDVFLSFRGEDTRECFTKKLYESLHKQGVRAFMDDEGLDRGDHIATTLLEAIDDSAASIV 76

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP--- 100
           I S  YA S W                  FY+VDPSHVRKQ   F   F+ L KRF    
Sbjct: 77  IISPNYADSHWCLDELNRICDLERLIIPVFYKVDPSHVRKQLGPFQDGFNYLEKRFANEK 136

Query: 101 EKMKRWKNALTEAADLSGF--DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           +K+ +W++++ +   L+GF  +S+       LI  +   VLK L  T    ++  VG+  
Sbjct: 137 DKILKWRDSMLKIGGLAGFVFNSSDDGDHENLIRRLVKRVLKELSNTPMVVSEFAVGINE 196

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEET 217
            +E++ +LL + S  V  L ++G+GG+ K T+A A+FN     FE   F  NVR+ A + 
Sbjct: 197 RVEKVINLLQLQSNNVKVLGLYGMGGVGKTTLAKALFNSFVGRFERRCFISNVRQFASKD 256

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARK-KVRIVFDDVT--------- 260
            G+  +Q  ++ +LS     R+  S        + R+ R+ +V +V DDV          
Sbjct: 257 DGLVSIQNNIIKDLSSQEGTRSFISDVKVGISTIKRIVRENRVLLVLDDVDHVNQLDALI 316

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS +IITTRD  VL     N+ Y + EL   +A +LF   A          +
Sbjct: 317 GKREWFHEGSCIIITTRDTTVLPEKHVNELYEVTELYAEEALELFSYHALRKKDPPPDFL 376

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSK-EVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             + + +     +PLAL+V GC+L G+ + + WE  ++KL+ I    + +VLKISYD LD
Sbjct: 377 SFSKQIVSLTGRMPLALEVFGCFLFGKRRVDEWEDVVKKLKTIRPGNLHDVLKISYDGLD 436

Query: 373 DSQKNVFLDIACFL--EGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           + +K +FLDIACF    G  RD+VI +                 K LI +     + MHD
Sbjct: 437 EQEKCIFLDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVREDNTLWMHD 496

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN------ 471
            +RDMGR+IV  E+   PG R+RLW   +I  VLK   GT  I+GI LD  + +      
Sbjct: 497 QIRDMGRQIVLDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFKERSNQWSKN 556

Query: 472 ----------REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEG--VPFAEVRHLEWPQ 519
                      ++ +++ +F  M  LR L+            LEG  +P  E++ L+W  
Sbjct: 557 YPPQPQAEKYNQVMLDTKSFEPMVSLRLLQINN-------LSLEGKFLP-DELKWLQWRG 608

Query: 520 CPLK--TLNICAEKLVSLKMP-CTKVEQLWD-DVQRLPSSLCTFKTPITFEIIDCKMLER 575
           CPL+  +L+    +L  L +    K++ LW    Q++P +L      +   + +C  L  
Sbjct: 609 CPLECISLDTLPRELAVLDLSNGQKIKSLWGLKSQKVPENL------MVMNLSNCYQLAA 662

Query: 576 LPD-----ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
           +PD      LE +        T   + ES+G L+ ++ L L+   NL  +P  +  L  L
Sbjct: 663 IPDLSWCLGLEKINLANCINLT--RIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHL 720

Query: 631 TFLFISHCERLQTLPELPCNLGLLS-----ARNCTSLEKLPAGLSSMSSV--LYVNLCNF 683
             L +S C +L+ LPE   N+G+L      A + T++ KLP  +  ++ +  L ++ C+ 
Sbjct: 721 ESLILSECSKLKALPE---NIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSH 777

Query: 684 LKLDPNELSEIVKDGWMKHSLYE 706
           L+  P+ + ++      + SLYE
Sbjct: 778 LRRLPDCIGKLC--ALQELSLYE 798



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 20/178 (11%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEY---LTVKGTTIRELPESLGRLSW 605
            ++ LPS++ +     T  +  CK L +LPD  + L     L + GT IR LP+ +G L  
Sbjct: 848  IKELPSTIGSLSYLRTLLVRKCK-LSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQ 906

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL------LSARNC 659
            +++L + N SNLE +PESI +L+ L  L I +      + ELP ++GL      L+   C
Sbjct: 907  LRKLEIGNCSNLESLPESIGYLTSLNTLNIIN----GNIRELPVSIGLLENLVNLTLSRC 962

Query: 660  TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
              L++LPA + ++ S     LC+ LK++   + ++ +   M  SL   R  K+    P
Sbjct: 963  RMLKQLPASIGNLKS-----LCH-LKMEETAMVDLPESFGMLSSLRTLRMAKRPHLVP 1014



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 15/156 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           + +LP S+          +  C  L RLPD   +L  L+ L++  T ++ELP ++G L  
Sbjct: 754 IVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGLQELPNTVGFLKN 813

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
           +++L L     L  +P+SI +L  LT L  S+      + ELP  +G LS       R C
Sbjct: 814 LEKLSLMGCEGLTLMPDSIGNLESLTELLASN----SGIKELPSTIGSLSYLRTLLVRKC 869

Query: 660 TSLEKLPAGLSSMSSVLYVNL-CNFLKLDPNELSEI 694
             L KLP    +++S++ ++L   +++  P+++ E+
Sbjct: 870 -KLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGEL 904



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 36/163 (22%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+   +LS ++ L L  N N   +P S++ LS L  L + +C  L +LP LP +L  L
Sbjct: 1048 KIPDDFEKLSLLETLKLDQN-NFHSLPSSLKGLSILKELSLPNCTELISLPLLPSSLIKL 1106

Query: 655  SARNCTSLEKL----------------------PAGLSSMSSV--LYVNLCNFLKLDPNE 690
            +A NC +LE +                        GL  + S+  LY++ CN        
Sbjct: 1107 NASNCYALETIHDMSSLESLEELELTNCEKVADIPGLECLKSLKRLYLSGCNACS----- 1161

Query: 691  LSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSS 733
             S++ K    + S    R   +++  PG ++P+WF  +++  S
Sbjct: 1162 -SKVCK----RLSKVALRNF-ENLSMPGTKLPEWFSGETVSFS 1198



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 26/148 (17%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLGRLS 604
            +++ LP S+   +  +   +  C+ML++LP  + NL+   +L ++ T + +LPES G LS
Sbjct: 940  NIRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKSLCHLKMEETAMVDLPESFGMLS 999

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL---LSARNCTS 661
             ++ L ++   +L  +P S+++                 LP   CNL L   L AR    
Sbjct: 1000 SLRTLRMAKRPHL--VPISVKNTGSF------------VLPPSFCNLTLLHELDARAWRL 1045

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
              K+P     +S      L   LKLD N
Sbjct: 1046 SGKIPDDFEKLS------LLETLKLDQN 1067


>gi|357499649|ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
 gi|355495128|gb|AES76331.1| Resistance protein PRG [Medicago truncatula]
          Length = 1256

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 294/932 (31%), Positives = 438/932 (46%), Gaps = 202/932 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L    I TFIDD +L  GD IS SL+  IE S I I 
Sbjct: 18  YDVFLSFRGSDTRFGFTGNLYKALRDCGIHTFIDDRELQGGDEISPSLVKAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      FY VDPSH+R Q+  FG   ++   +F
Sbjct: 78  VFSINYASSSFCLDELVHIIDCFNTKGCLVLPVFYGVDPSHIRHQTECFGEAIAKQEVKF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKG 152
                  +++ +WK AL +AA+ SG   N+    E ++I +I  +V  +++ T       
Sbjct: 138 QNQKDDMDRLLKWKCALNKAANFSGHHFNLGNEYEYEIITKIVKEVSNKINRTPLHVADY 197

Query: 153 LVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG+E  + +I+SLL +GS + VC + I+G+GG  K T+A A++N I+  FE   F  NV
Sbjct: 198 PVGIESRLLQIKSLLDVGSNDAVCLVGIYGMGGSGKTTLAQAIYNFIADQFECLCFLHNV 257

Query: 212 REAEETGGIKDLQKKLLSELS----KDGNM-RNIESQLNRLARKKVRIVFDDVTS----- 261
           RE     G++DLQ+KLLS+      K G++   I     RL  KKV ++ DDV       
Sbjct: 258 REISAKHGLEDLQEKLLSKTVGLSVKFGHVSEGIPIIKERLRLKKVLLILDDVDELKQLK 317

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRV++TTRDK +L      + Y +  L   +A +L    AF  + +D+
Sbjct: 318 VLAGDPNWLGHGSRVVVTTRDKHLLACHGIERTYELDGLNKEEALELLKWKAFKNNKVDS 377

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+  + ++A+ YA G+PLAL+V+G  L G+ K+ W+S + + E IPH E+ ++LK+S+DS
Sbjct: 378 SYEHILNRAVTYASGLPLALEVVGSSLFGKHKDEWKSTLDRYERIPHKEVLKILKVSFDS 437

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR---- 412
           L+  +++VFLDIAC   G    EV  I  A               K LI +   YR    
Sbjct: 438 LEKDEQSVFLDIACCFRGYILAEVEDILYAHYGECMKYHIRVLIEKCLIKI---YRQCGC 494

Query: 413 --IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             + +HDL+ +MG+EIVR+ES   PGKR+RLW HKDI QVL++N GT  IE I ++ + +
Sbjct: 495 TYVTLHDLIEEMGKEIVRQESPKEPGKRSRLWFHKDIVQVLEENLGTSKIEIIYME-SPL 553

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP--------- 521
           ++E  +  +   ++ K+  L+ +  K       LE +P   +R LEW   P         
Sbjct: 554 SKEEEVVEWKGDELKKMENLKTFIIKRGRFSKGLEHLP-NNLRVLEWRSYPSQDSPSIFW 612

Query: 522 LKTLNICAEKLVSLKMPCTKVEQLWDDVQR-----------------------LPSSLCT 558
            K L+IC      L+  C    +L D +++                       LP +L T
Sbjct: 613 QKKLSIC-----KLRESCFTSFELHDSIKKFVNMRELILDHCQCLIRIHNVSGLP-NLET 666

Query: 559 F-----KTPIT----------FEIIDCKMLERL----PDELENLEYLTVK-GTTIRELPE 598
           F     K  IT           +I++ K   +L    P +L +L  L +   T+++  PE
Sbjct: 667 FSFQCCKNLITVHNSVGLLNKLKILNAKRCSKLTSFPPMKLTSLHELELSYCTSLKSFPE 726

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--SHCERLQTLPELPCNLGLLSA 656
            LG +  V R++L   + +E +P S R+LS L  L I  S   RL     +  NL  + A
Sbjct: 727 ILGEIKNVTRILL-RGTFIEELPYSFRNLSGLHRLLIWGSRNVRLPFGILMMPNLARIEA 785

Query: 657 RNC-------------------------TSLEKLPAGLSSMSSVLYVNL----------- 680
             C                          S+E LP  LS +++V  + L           
Sbjct: 786 YGCLLFQKDNDKLCSTTMSSCVQFLRCKLSVEFLPIVLSQITNVKDLVLSGSNFTILPEC 845

Query: 681 ---CNFLK---------------LDPN----------ELSEIVKDGWMKHSLYEERGIKK 712
              CNFL+               + PN           L+ + +   +   L+E  G   
Sbjct: 846 LKECNFLQSLELDNCKSLQEIRGIPPNLKHVSALRCESLTYLCRWKLLNQELHEA-GSTD 904

Query: 713 SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
             +     IP+WF HQS G S T   R   P+
Sbjct: 905 FRWAGTERIPEWFEHQSKGPSITFWFREKFPS 936


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 236/622 (37%), Positives = 357/622 (57%), Gaps = 64/622 (10%)

Query: 124 IRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEG-VCKLRIWGI 182
           +R E +LIEEI   +  +L+  +QS+   LVG+E  I ++ESLLC+ S   V  + IWG+
Sbjct: 7   LRDEVELIEEIVKCLSSKLNLMYQSELTDLVGIEERIADLESLLCLDSTADVLVIGIWGM 66

Query: 183 GGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIES 242
           GGI K T+A AV+N++   +EGS F  N+ E  E  G+  L+ K+LS L K+ ++ +I +
Sbjct: 67  GGIGKTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMIYLKNKILSILLKENDL-HIGT 125

Query: 243 QLN-------RLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCW 279
            +        RLARKKV +V DD+                 SGSR+I+TTRDKQVL    
Sbjct: 126 PIGVPPYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGK-R 184

Query: 280 ANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCG 339
            N  Y  K L   DA KLF   AF    LD   IEL+ + I YA G PLALKVLG +L G
Sbjct: 185 VNCTYEAKALQSDDAIKLFIMNAFEHGCLDMEWIELSRRVIHYANGNPLALKVLGSFLYG 244

Query: 340 RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD 399
           +SK  WES ++KL+ +PH +I+ VL++SYD LD  +KN+FL IAC L+G    ++I++ D
Sbjct: 245 KSKIEWESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLD 304

Query: 400 AS--KSLINLDLFYR--------------IRMHDLLRDMGREIVRKESINHPGKRNRLWH 443
           A    ++I L +                 + MHDL+++MG EIVR+E +  PGKR+RLW 
Sbjct: 305 ACGFSTIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWD 364

Query: 444 HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF---YGDKNKCM 500
             D++QVL  NTGT+AI+ I+L+++K + E+H++   F +M +L+FL+F   YGD+    
Sbjct: 365 PNDVHQVLTNNTGTKAIKSITLNVSKFD-ELHLSPQVFGRMQQLKFLKFTQHYGDEKILY 423

Query: 501 VSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLC 557
           +   LE +P  ++   +W   PLK+L  + CAE LV LK+  ++VE+LWD +Q +     
Sbjct: 424 LPQGLESLP-NDLLLFQWVSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQH--- 479

Query: 558 TFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNN 614
             K  +++     K L  LPD  +  NLE + + G  ++  +  S+ RL+ + RL L   
Sbjct: 480 LKKIDLSYS----KYLLDLPDFSKASNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYC 535

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
             L  +  S  HL  L  LF+S C RL+       N+  L A + T++ +LP+ + S+ +
Sbjct: 536 KALTSL-RSDTHLRSLRDLFLSGCSRLEDFSVTSDNMKDL-ALSSTAINELPSSIGSLKN 593

Query: 675 V--LYVNLCNFLKLDPNELSEI 694
           +  L ++ C  L   PNE+ ++
Sbjct: 594 LETLTLDFCKSLNKLPNEVIDL 615



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 159/379 (41%), Gaps = 74/379 (19%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTT------------- 592
           +  LPSS+ + K   T  +  CK L +LP+E   L +L  L V G T             
Sbjct: 581 INELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSG 640

Query: 593 --------------IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
                         + E+P+++  LS   R +L   +++ER P SI+HLSKL  L +  C
Sbjct: 641 LASLETLKLEECRNLSEIPDNISLLS-SLRELLLKETDIERFPASIKHLSKLEKLDVKGC 699

Query: 639 ERLQTLPELPCNLGLLSARNCTSLEKLPAG------LSSMSSVLYVNLCNFLKLDPNELS 692
            RLQ +PELP +L  L A +C+SLE +         L   +  L+    N + LD   L 
Sbjct: 700 RRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNLDELSLR 759

Query: 693 EIVKDGW--MKHSLYEERGIKKSMY--------FPGNEIPKWFRHQSMGSSATLK-TRPP 741
            I  +    MK   Y       S +        +PG+++P+W  +++  +S T+  +  P
Sbjct: 760 AIEVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVPEWLMYRTTEASVTVDFSSAP 819

Query: 742 RPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLYSWFL 800
           +    +K + F FC V          +  S + ++ G + Y    + ++ S G + +W  
Sbjct: 820 K----SKFVGFIFCVVA--------GQLPSDDKNFIGCDCYLETGNGEKVSLGSMDTWTS 867

Query: 801 GKISYVESDHVFLG----CNSFGGEYFGPNYDEF--SFRIHCSFHFPPY-------LERG 847
              S   SDH+F+     C     +    N DE   S+    SF F           E  
Sbjct: 868 IHSSEFFSDHIFMWYDELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGNTWKKRENN 927

Query: 848 EVKKCGIHFVYAQDSADHI 866
            ++ CG+  +Y  +  D I
Sbjct: 928 MIRGCGVCPIYDTEYFDFI 946


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 244/717 (34%), Positives = 362/717 (50%), Gaps = 99/717 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT  L+H L  + I+TF DD  L RG +IS  LL  IE S     
Sbjct: 19  YDVFLSFRGEDTRKGFTDCLYHELQRQGIRTFRDDPHLERGTSISLELLTAIEQS----- 73

Query: 61  IFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR---WKNALTEAADLS 117
                                     SF   F    ++F E  K    W++ALT+ A L+
Sbjct: 74  --------------------------SFAEAFQEHEEKFGEGNKEVEGWRDALTKVASLA 107

Query: 118 GFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVGVECSIEEIESLLCIGSEGVC 175
           G+ S   R E++LI EI   +  ++  +      ++ LVG++  +E+I  LL   +  V 
Sbjct: 108 GWTSEKYRYETELIREIVQALWSKVHPSLTVFGSSEKLVGMDTKLEDIYDLLVEEANDVR 167

Query: 176 KLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDG 235
            + IWG+GG+ K T+A  V+ +IS  F+   F  N+RE   T G+  LQK++LS++ K+ 
Sbjct: 168 FIGIWGMGGLGKTTLARVVYEEISHRFDVCVFLANIREVSATHGLVYLQKQILSQILKEE 227

Query: 236 NMR------NIESQLNRLARKKVRIVFDDVTSG----------------SRVIITTRDKQ 273
           N++       I      L  K V +V DDV                   SR+IITTR+++
Sbjct: 228 NVKVWDVYSGITMTKRCLCNKAVLLVLDDVDQSEQLEHLVGEKDWFGLRSRIIITTRNQR 287

Query: 274 VLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVL 333
           VL      K Y +K L   +A +LF   AF     +  + EL    + YA G+PLALK L
Sbjct: 288 VLVTHGVEKPYELKGLNKDEALQLFSWKAFRKCEPEEDYAELCKSFVTYAGGLPLALKTL 347

Query: 334 GCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACF---LEGEH 390
           G +L  RS   W SA++KL+  P+  + E+LK+S+D LD+ +K +FLDIACF    + E 
Sbjct: 348 GSFLYKRSLHSWSSALQKLQQTPNRSVFEILKLSFDGLDEMEKKIFLDIACFRRLYDNES 407

Query: 391 RDEVISIFD----------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNR 440
             E +  FD            KSL+ +    R+ +HDL+ +MG EIVR+E+   PG R+R
Sbjct: 408 MIEQVHSFDFCPRIIIDVLVEKSLLTISSDNRVGVHDLIHEMGCEIVRQEN-KEPGGRSR 466

Query: 441 LWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCM 500
           L  H DI+ V   NTGTEAIEGI L + ++  E   N  AFSKM KL+ L  +  +    
Sbjct: 467 LCLHNDIFHVFTNNTGTEAIEGILLHLAEL-EEADWNLEAFSKMCKLKLLYIHNLRLSLG 525

Query: 501 VSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
             +L       +R L W   P K+L  C  ++KL  L +  + ++ LW+ +         
Sbjct: 526 PIYLPNA----LRFLNWSWYPSKSLPPCFQSDKLTELSLVHSNIDHLWNGI--------- 572

Query: 559 FKTPITFEIIDCKM---LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILS 612
            K     + ID      L R PD   + NLE L ++G T + E+ +S G L  ++ L L 
Sbjct: 573 -KYSRNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVEVHQSTGLLQKLRILNLR 631

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS--ARNCTSLEKLPA 667
           N  +++ +P  + H+  L    +S C +L+ +PE    +  LS  + + T++EKLP+
Sbjct: 632 NCKSIKSLPSEV-HMEFLETFDVSGCSKLKMIPEFVGQMKRLSRLSLSGTAVEKLPS 687



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 146/348 (41%), Gaps = 73/348 (20%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
            L +SL  F +  T ++ DC + E                    ELP  +G LS ++ L L
Sbjct: 737  LLASLKHFSSLTTLKLNDCNLCEG-------------------ELPNDIGSLSSLEWLYL 777

Query: 612  SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL--PAGL 669
              N N   +P SI  LSKL ++ + +C+RLQ LPEL  N  L    NCTSL+    P  L
Sbjct: 778  GGN-NFSTLPASIHLLSKLRYINVENCKRLQQLPELSANDVLSRTDNCTSLQLFPDPPDL 836

Query: 670  SSMSSVLYVNLCNFLKLDPN---------------ELSEIVKDGWMKHSLYEERGIKKSM 714
              +++  ++N  N L +  N               E+  + +     H     R   +S+
Sbjct: 837  CRITTSFWLNCVNCLSMVGNQDASYFLYSVLKRWIEIQVLTRCDMTVHMQETHRRPLESL 896

Query: 715  --YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSG 772
                PG+EIP+WF +QS+G   T K   P    Y+KLI FA CA++V          +S 
Sbjct: 897  KVVIPGSEIPEWFNNQSVGDRVTEKL--PSDECYSKLIGFAVCALIVPQDNPSAVPEESN 954

Query: 773  EDD-------WDG---NVYAVCCDWKRKSEGHLYSW-FLGKISYVESDHVFLGCNSFGGE 821
              D       W+    ++ +V    K+    HLY    L      E+      C  F   
Sbjct: 955  LPDTCHIVRLWNNYGFDIASVGIPVKQFVSDHLYLLVLLNPFRKPEN------CLEF--- 1005

Query: 822  YFGPNYDEFSFRIHCSFHFPPYLERG-EVKKCGIHFVYAQDSADHILK 868
                   EFSF I  +        RG +VKKCG+  +Y  D+ + I K
Sbjct: 1006 -------EFSFEIRRAVGN----NRGMKVKKCGVRALYEHDTEELISK 1042


>gi|224136171|ref|XP_002327398.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835768|gb|EEE74203.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 722

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 250/723 (34%), Positives = 374/723 (51%), Gaps = 92/723 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFTSHL+  L  + I  ++DD  L RG  I  +L   IE S  +I+
Sbjct: 21  YDVFLSFRGKDTRNNFTSHLYSNLEQRGIDVYMDDSGLERGKTIEPALWQAIEDSRFSIV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS V  Q+  + + F   +++ 
Sbjct: 81  VFSRDYASSSWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVADQTGDYKKAFIEHKEKH 140

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               +K+K W + L+  A+LSG+D      ES+ I++I   +  +L  T  + +K LVG+
Sbjct: 141 SGNLDKVKCWSDCLSTVANLSGWDVRN-SDESQSIKKIVEYIQCKLSFTLPTISKNLVGM 199

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
           +  ++ +   +         + I G+GG+ K T+A  ++++I   F GS F  NVRE   
Sbjct: 200 DSRLKVLNEYIDEQVNDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVFA 259

Query: 216 ETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
           E  G+  LQ++LLSE+S +      + R I+    RL  KKV ++ DDV           
Sbjct: 260 EKDGLCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLILDDVDDEEQLQMLAA 319

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IIT+R+K VL +    + Y  ++L   DA  LF   AF  D       E
Sbjct: 320 EHGSFGPGSRIIITSRNKHVLDSHGVTRIYEAEKLNDKDALLLFSWKAFKRDQPAEDLSE 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ + + YA G+PLAL+V+G +L  R    W+SA+ ++  IP  +I +VL+IS+D L + 
Sbjct: 380 LSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAINRMNDIPDRKIIDVLRISFDGLHEL 439

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +K +FLDIACFL+G  +D +  + D+              KSLI +     I MH+LL+ 
Sbjct: 440 EKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQVLIEKSLIRVSR-DEIWMHNLLQK 498

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG EIVR ES   PG+R+RL  +KD+   LK +TG   IE I LD+ K  +E   N  AF
Sbjct: 499 MGEEIVRCESPEEPGRRSRLHTYKDVSDALKDSTG--KIESIFLDLPKA-KEATWNMTAF 555

Query: 482 SKMPKLRFLRFYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTLNIC--AEKLVSLKM 537
           SKM KLR L+ +       V   EG  +   E+R LEW   P K+L  C   ++LV L M
Sbjct: 556 SKMTKLRLLKIHN------VDLSEGPEYLSNELRFLEWHAYPSKSLPACFRPDELVELYM 609

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLTVKG-T 591
            C+++EQLW          C  K  +  +II+      L   PD   + NLE L ++G  
Sbjct: 610 SCSRIEQLW----------CGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEGCA 659

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ E+  S GR   ++ + L N  +L  +P ++  +  L    +S C +L   P++  N+
Sbjct: 660 SLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNL-EMESLEVCTLSGCSKLDKFPDIVGNM 718

Query: 652 GLL 654
             L
Sbjct: 719 NCL 721


>gi|332330341|gb|AEE43927.1| TIR-NBS-LRR resistance protein muRdr1C [Rosa multiflora]
          Length = 1139

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 256/744 (34%), Positives = 389/744 (52%), Gaps = 85/744 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+H L  + I TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYHELQRRGIWTFRDDPQLERGTAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YA+S+W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNYATSKWCLLELSKIIECMEERGTILPVFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 E---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD---ATFQSKNKGLV 154
           E   +M+ W+ ALT+ A L+G+ S   R E++LI EI   +  ++    A F S  K LV
Sbjct: 139 EGNEEMEGWRVALTKMASLAGWTSKDYRYETELIREIVQALWSKVYPSLAVFDSSEK-LV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  ++EI+ LL   +  V  + IWG+GGI K T+A  V+ KIS  F+   F  +VR+ 
Sbjct: 198 GMDTKLKEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYGKISHQFDVCIFLDDVRKV 257

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------ 262
                + DLQK++ S++ K+ +++  ++ S L  + R    K V +V D+V         
Sbjct: 258 STIHDLDDLQKRIRSQILKEEDVQVGDVYSGLAMIKRYFCNKAVLLVLDNVDQSEKLENL 317

Query: 263 ----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SR+IITTR++ VL      + Y +K L   +A +LF   AF     +  +
Sbjct: 318 VGEKDWFGLRSRIIITTRNRHVLVRHGIEEPYELKGLNQYEALQLFSLEAFRKCEPEEDY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L    + YA G+PLALK+LG +L  RS + W S  +KL+  P+  + E+LK+S+D LD
Sbjct: 378 AKLCKHFVTYAAGLPLALKILGSFLYKRSLDSWSSTFQKLKQTPNPTVFEILKLSFDGLD 437

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDASK--SLINLDLFY----------RIRMHDLLR 420
           + +K  FLDIACF      + +I    +S+  S I +D+            +I MHDL++
Sbjct: 438 EMEKKTFLDIACFRRLYDNESMIEQVSSSEFSSRIAMDVLAERSLLTISHNQIYMHDLIQ 497

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MG EIVR+E+   PG R+RLW   DI+ V  KNTGTE  EGI L ++K+  E   N  A
Sbjct: 498 EMGCEIVRQEN-KEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLDKL-EEADWNLEA 555

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
           FSKM +L+ L  +  +      +L       ++ L+W   P K+L  C   ++L  L + 
Sbjct: 556 FSKMCELKLLYIHNLRLSLGPKYLPNA----LKFLKWSWYPSKSLPPCFQPDELTELTLV 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRE 595
            + ++ LW+  +    SL   K   + ++ D   L R PD   + +LE L ++G  ++ +
Sbjct: 612 HSNIDHLWNGKK----SLGNLK---SIDLSDSINLTRTPDFTGIPSLEKLILEGCISLVK 664

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +  S+  L  +K     N  +++ +P  +  +  L    +S C +L+ +PE       LS
Sbjct: 665 IHPSIASLKRLKFWNFRNCKSIKSLPGEV-DMEFLETFDVSGCSKLKMIPEFVGQTKRLS 723

Query: 656 ARNC---TSLEKLPAGLSSMSSVL 676
            R C   T++EKLP+ +  +S  L
Sbjct: 724 -RLCLGGTAVEKLPSSIEHLSESL 746



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 136/298 (45%), Gaps = 42/298 (14%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN--LG 652
            E+P  +G LS +KRL L  N N   +P SI  LSKLT+  + +C +LQ LP LP +  L 
Sbjct: 812  EIPNDIGSLSSLKRLELRGN-NFVSLPASIHLLSKLTYFGVENCTKLQQLPALPVSDYLN 870

Query: 653  LLSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPN------------ELSEIVKDG 698
            +L+  NCTSL+    P  LS +S   +++  N L    +            E+  + +  
Sbjct: 871  VLT-NNCTSLQVFPDPPDLSRLSE-FFLDCSNCLSCQDSSYFLYSVLKRWIEIQVLSRCD 928

Query: 699  WMKHSLYEERGIKKSMYF--PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
             M H     R   + + F  PG+EIP+WF +QS+G   T K   P  A  +K I FA CA
Sbjct: 929  MMVHMQETNRRPLEFVDFVIPGSEIPEWFNNQSVGDRVTEKL--PSDACNSKWIGFAVCA 986

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE---SDHVFL 813
            ++V          +      D + Y + C W     G     F+G +  V+   SDH++L
Sbjct: 987  LIVPQDNPSALLERPF---LDPDTYGIECYWNDYGIG-----FVGLVVPVKQFVSDHLWL 1038

Query: 814  GCNSFGGEYFGPNYDEFSFRIHCSFHFPPYL--ERG-EVKKCGIHFVYAQDSADHILK 868
                    +  P   E    ++  F     +   RG +VKKCG+  +Y  D  + I K
Sbjct: 1039 LV--LLSPFRKP---ENCLEVNFVFEITRAVGNNRGMKVKKCGVRALYEHDVEELISK 1091


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 240/723 (33%), Positives = 376/723 (52%), Gaps = 97/723 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL  + IKTF D++ +  G  I + L   IE S  AI+
Sbjct: 16  YDVFLSFRGEDTRKTFTSHLYEVLKDRGIKTFQDEKRLEYGATIPEELSKAIEESQFAIV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA+SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 76  VFSKNYATSRWCLNELVKIMECKTQFRQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 135

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++RW+ AL  AA+L G   N  + ++  I +I   +  +L     S  + +VG+
Sbjct: 136 KDDAEGIQRWRIALNAAANLKGSCDNRDKSDADCIRQIVGQISSKLCKISLSYLQNIVGI 195

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +++IESLL IG   V  + I G+GG+ K TIA A+F+ +      S  F+G+ F  +
Sbjct: 196 DTHLKKIESLLEIGINDVRVVGICGMGGVGKTTIARAMFDTLLVRRDSSYQFDGACFLED 255

Query: 211 VREAEETGGIKDLQKKLLSELSKD----GNMRNIESQL-NRLARKKVRIVFDDVT----- 260
           ++E +  G I  LQ  LLS+L ++     N  + + Q+ +RL  KKV IV DD+      
Sbjct: 256 IKENK--GRINSLQNTLLSKLLREKAEYNNKEDGKHQMASRLRSKKVLIVLDDIDDKDHY 313

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GSR+I+TTRDK +++       + +  L   +A +LF Q+AFG +  
Sbjct: 314 LEYLAGDLDWFGNGSRIIVTTRDKHLIEKFGI---HLVTALTGHEAIQLFNQYAFGKEVS 370

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D    +L+ + +KYA+G+PLAL+VLG  L  R   VW+SA+ +++  P+ +I E LKISY
Sbjct: 371 DEHFKKLSLEVVKYAKGLPLALRVLGSSLRNRGITVWKSAIEQMKNNPNSKIVENLKISY 430

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L+  Q+ +FLDIACF  G+ +  ++ +  +              +SL+ +  + +I M
Sbjct: 431 DGLEPIQQEMFLDIACFFRGKEKGAIMQVLKSCDCGAEYGLDVLIERSLVFITKYSKIEM 490

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL+++MGR IV  +   + G+ +RLW  KD  +++  NTGT A+E I +      R   
Sbjct: 491 HDLIQEMGRYIVNLQ--KNLGECSRLWLTKDFEEMMINNTGTMAMEAIWVSTYSTLR--- 545

Query: 476 MNSYAFSKMPKLRFL---RFYGDKNKCMVSHLEGVPFAEVRHLEW---PQCPLKTLNICA 529
           +++ A   M +LR L    +    +   ++H   + +    +L W   P  P ++L    
Sbjct: 546 ISNEAMKNMKRLRILYIDNWTWSSDGSYITHDGSIEYLS-NNLRWFVLPGYPRESLPSTF 604

Query: 530 EK--LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEY 585
           E   LV LK+    +  LW + + LPS           ++   K L R PD   + NLEY
Sbjct: 605 EPKMLVHLKLSGNSLRYLWMETKHLPSLR-------RIDLSRSKRLMRTPDFTGMPNLEY 657

Query: 586 LTVK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L +   + + E+  SLG    + RL L N  +L R P    ++  L +L + +C+ L+  
Sbjct: 658 LDLTWCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFP--CVNVESLEYLGLEYCDSLEKF 715

Query: 645 PEL 647
           PE+
Sbjct: 716 PEI 718



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 102/267 (38%), Gaps = 67/267 (25%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRE------------- 595
            LPSS+C  K+ +   +  C  LE LP+E   L+NLE L  K T I               
Sbjct: 763  LPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKLKI 822

Query: 596  ---------------------------------------LPESLGRLSWVKRLILSNNSN 616
                                                   LPE +G LS +K L L  N N
Sbjct: 823  LSFSSFGYDGVHFEFPPVAEGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLKELCLDGN-N 881

Query: 617  LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
             E +P SI  L  L  L +S C+RL  LPEL   L +L      +L+     ++    + 
Sbjct: 882  FEHLPRSIAQLGALQILDLSDCKRLTQLPELHPGLNVLHVDCHMALKFFRDLVTKRKKLQ 941

Query: 677  YVNLCN-----FLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY---FPGNEIPKWFRHQ 728
             V L +        L  + L + +    ++H ++    + +S++    P  +IP WF HQ
Sbjct: 942  RVGLDDAHNDSIYNLFAHALFQNISS--LRHDIFASDSLSESVFSIVHPWKKIPSWFHHQ 999

Query: 729  SMGSSATLKTRPPRPAGYNKLISFAFC 755
               SS +    P      +K + FA C
Sbjct: 1000 GRDSSVSANL-PKNWYIPDKFLGFAVC 1025


>gi|357499629|ref|XP_003620103.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
 gi|355495118|gb|AES76321.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
          Length = 1075

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 291/933 (31%), Positives = 439/933 (47%), Gaps = 190/933 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFL+FRG DTR  FT +L+  L    ++TFID + L  GD I+QSL+  IE S I I 
Sbjct: 19  YDVFLNFRGTDTRYGFTGNLYKALCDGGVRTFIDHKDLHEGDRITQSLVKAIEESRILIP 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      F  V+PSHVR Q+ S+G   ++  +RF
Sbjct: 79  VFSKNYASSLFCLDELVHIIHRYEEKGCFVFPIFCDVEPSHVRHQTGSYGEALAKHEERF 138

Query: 100 P-------EKMKR---WKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQS 148
                   + MKR   WK AL +AA+LSG   N     E + I EI   V  +L+     
Sbjct: 139 QNNKENYNDNMKRLHKWKMALNQAANLSGHHFNPRNGYEFEFIREIVKYVSNKLNHVLLH 198

Query: 149 KNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
                VG++  + ++ SLL +GS    K L I+G GGI K T+A AV+N I+  FE   F
Sbjct: 199 VVDYPVGLQHRVLKVNSLLKVGSNDKVKMLGIYGPGGIGKTTLAKAVYNFIAGQFECVCF 258

Query: 208 ALNVREAEETGGIKDLQKKLLSEL-SKDGNMRNIESQL----NRLARKKVRIVFDDVT-- 260
             NVRE     G++ LQK LLS++   D  + +    +     RL +KKV ++ DD+   
Sbjct: 259 LHNVRENSAKHGLEHLQKDLLSKIVGLDIKLADTSEGIPIIKQRLQQKKVLLILDDINKL 318

Query: 261 --------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                         +GSRVI+TTRDK +L +      Y   EL   +A +L    AF   
Sbjct: 319 KQLQAMAGGTDWFGAGSRVIVTTRDKNLLASHGIEVTYETHELNKKEALELLRWKAFKAK 378

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
            +D+S+  + ++AI YA G+PLAL++LG  L G+  E W S + + E IP  EI+++L++
Sbjct: 379 QVDSSYECILNRAINYAAGLPLALEILGSNLYGKHIEEWNSLLDRYERIPSEEIQKILRV 438

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR 412
           S+D+L++ +++VFLDIAC  +G    EV  +  A               KSL+ +     
Sbjct: 439 SFDALEEDERSVFLDIACCFKGYKLKEVEDMLCAHYGQRMRYHIGVLVKKSLVKIINERF 498

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + +HDL+ DMG+EIVR+ES   PGKR+RL  H+DI+QVL++N+GT  IE I LD      
Sbjct: 499 VTLHDLIEDMGKEIVRQESPKEPGKRSRLSFHEDIFQVLEENSGTSQIEIIRLDFPLPQA 558

Query: 473 EIHMNSYAFSKMPKLRFL----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
            +        KM  L+ L     F+   +  +  +L  + +  +R +     P K L+IC
Sbjct: 559 IVEWKGDELKKMKNLKTLIVKTSFFPKPHVHLPDNLRVLEWHSLRDIPSEFLP-KNLSIC 617

Query: 529 AEK---LVSLKM----------PCTKVEQLWD--DVQRLPS-------SLCTFKTPITF- 565
             +     S KM           C ++ ++ D   +Q L          L T    I F 
Sbjct: 618 KLRKSCPTSFKMFMVLKVLHLDECKRLREISDVSGLQNLEEFSFQRCKKLRTIHDSIGFL 677

Query: 566 ---EIID---CKMLERLP-------------------------DELENLEYLTVKGTTIR 594
              +I++   C+ L+  P                          ++ENLE + +K T+I+
Sbjct: 678 NKLKILNAEGCRKLKSFPPIQLTSLELLRLSYCYRLRNFPEILGKMENLESIFLKETSIK 737

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS-------HCER------- 640
           ELP S   LS ++ L+L       R+P SI  + KL+++ +         C++       
Sbjct: 738 ELPNSFQNLSGLRNLLLDGFRMFLRLPSSILVMPKLSWVLVQGRHLLPKQCDKPSSMVSS 797

Query: 641 -LQTLPELPCNLG-----------------LLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
            +++L  + CNL                   LS  N T L +    L S+   LY++ C 
Sbjct: 798 NVKSLVLIECNLTGESLPIIFKWFANVTNLNLSKSNITILPECIKELRSLER-LYLDCCK 856

Query: 683 FLK----LDPN----------ELSEIVKDGWMKHSLYEERGIKKSMY-FPGN-EIPKWFR 726
            L+    + PN           LS   +   +   L+E   +  +M+  PG   IP+WF 
Sbjct: 857 LLQEIRAIPPNLKFLSAINCESLSSSCRSMLLDQELHE---VGDTMFRLPGTLRIPRWFE 913

Query: 727 HQSMGSSATLKTRPPRPAGY-NKLISFA-FCAV 757
           HQS        TR P    + NKL S + FC +
Sbjct: 914 HQS--------TRQPISFWFHNKLPSISLFCTI 938


>gi|356559371|ref|XP_003547973.1| PREDICTED: TMV resistance protein N isoform 1 [Glycine max]
          Length = 1001

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 284/886 (32%), Positives = 416/886 (46%), Gaps = 175/886 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD+ L +G  I+++L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+VDPS VR    SFG     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L+  + EK++ WK AL + ++ SG  F  +  + E   I+EI   V  + +      +  
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  +  ++SLL +G++ V  +  I G+GG+ K T+A AV+N I+ HFE   F  NV
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMRNIESQLN------RLARKKVRIVFDDVTS---- 261
           RE     G++ LQ  LLS+   D  +    S+        +L  KKV +V DDV      
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-L 308
                       GSRVIITTRD+Q+L      + Y+++EL    A +L  Q AFG +  +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++A+ YA G+PLALKV+G  L G+S E WES +   E  P   I   LK+SY
Sbjct: 368 DPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-- 412
           D+L++ +K++FLDIAC  +     +V  I  A               KSLIN+   +   
Sbjct: 428 DALNEDEKSIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDK 487

Query: 413 --IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             +R+HDL+ D+G+EIVR+ES   PGKR+RLW H+DI +VL++      +  + LD    
Sbjct: 488 EVMRLHDLIEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKTLVNLTSLILDECDS 547

Query: 471 NREI-------HMNSYAFSK-------------MPKLRFLRFYG---------------- 494
             EI       ++ + +FS+             + KL+ L   G                
Sbjct: 548 LTEIPDVSCLSNLENLSFSECLNLFRIHHSVGLLGKLKILNAEGCPELKSFPPLKLTSLE 607

Query: 495 --DKNKCMVSHLEGVP-----FAEVRHLEWPQCPLKTL-----NICAEKLVSLKMPCTKV 542
             D + C  S LE  P        +  L+  +CP+  L     N+   + + L       
Sbjct: 608 SLDLSYC--SSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQELELDHGPESA 665

Query: 543 EQLWD-DVQRLPSSLCTFKTPITFEIIDCKMLER-LPDELENLEYLTVKGTTIRELPESL 600
           +QL D D   L S++C    P  ++I   ++  R LPD  + L+  +V  +++  L   L
Sbjct: 666 DQLMDFDAATLISNICMM--PELYDISARRLQWRLLPD--DALKLTSVVCSSVHSLTLEL 721

Query: 601 GR------LSW---VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
                   LSW   V+ L L   S    IPE I+    L+ L +S C+RLQ +  +P NL
Sbjct: 722 SDELLPLFLSWFVNVENLRL-EGSKCTVIPECIKECRFLSILILSGCDRLQEIRGIPPNL 780

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
              +A     L       SS+S +L                E+ + G    SL       
Sbjct: 781 ERFAATESPDLTS-----SSISMLLN--------------QELHEAGHTDFSL------- 814

Query: 712 KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
                P  +IP+WF  QS G S     R   PA         FC V
Sbjct: 815 -----PILKIPEWFECQSRGPSIFFWFRNEFPA-------ITFCIV 848


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 251/813 (30%), Positives = 383/813 (47%), Gaps = 132/813 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+ F  HL+  L  K I  F DDQ L +G+++S  LL  I+ S ++I+
Sbjct: 64  YDVFISFRGPDTRNTFVDHLYAHLKRKGIFAFKDDQRLEKGESLSPQLLQAIQNSRVSIV 123

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSERYA S W                      FY VDPSHVRK    F  + S  +   
Sbjct: 124 VFSERYAESTWCLEEMATVAECRKRLKQTVFPVFYDVDPSHVRKHIGVFKANNSHTKTYD 183

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K+ RW+ A+TE  +L GFD    +PE   IE+I   V+K L+  F      LVG++  
Sbjct: 184 RNKVVRWQEAMTELGNLVGFDVRY-KPEFTEIEKIVQAVIKTLNHKFSGFTNDLVGMQPR 242

Query: 160 IEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
           IE++E LL + SE      L IWG+GG+ K T A  ++++IS  F+   F  N  +    
Sbjct: 243 IEQLEKLLKLSSENDDFRVLGIWGMGGVGKTTHATVLYDRISYQFDARCFIHNTSKIYMD 302

Query: 218 GGIKDLQKKLLSELSKDGNMRNIES------QLNRLARK-KVRIVFDDV----------- 259
           GGI  +QK++L +   + N+ + ++       +NRL    KV +V D++           
Sbjct: 303 GGIVSVQKQILGQTLDERNLDSYDTCEIAGIMINRLQSGIKVLLVLDNIDHLEQLQELAI 362

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITTRD+ +L+   A+  + +  L   DA++LFC+ AF G+   +  +E
Sbjct: 363 NPKLLCRGSRIIITTRDEHILRVYGADTVHEVPLLNSNDAYELFCRKAFKGEDQTSDCVE 422

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  + +KYAQ +PLA+KV+G +LC R    W+ A+  L+  P  +I +VL++S D L   
Sbjct: 423 LIPEVLKYAQHLPLAIKVVGSFLCTRDATQWKDALASLKNSPDSKIMDVLQMSIDGLQHE 482

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           +K +F+ IACF +GE    V  I DA              KSLI +     I MHD+L++
Sbjct: 483 EKEIFMHIACFFKGEREVYVKRILDACGLHPHIGIQRILEKSLITIK-NQEIHMHDMLQE 541

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGI------------------ 463
           +G++IVR      PG  +RLW + D Y VL   T T     I                  
Sbjct: 542 LGKKIVRHRFPEEPGSWSRLWRYNDFYHVLMTETDTPTSASIHKIVVWPLYVLGTLEKLS 601

Query: 464 -----SLDMNKVN-REIHM-------------------------NSYAFSKMPKLRFLRF 492
                +LD+  ++  EI +                          +  FS M  L  L  
Sbjct: 602 LVIFGTLDLGTISYHEISIIREQCVGTNNVKAIVLDQKENFSKCRTEGFSNMRNLGLLIL 661

Query: 493 YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ 550
           Y +     ++ L       +R+L W   P  +L  N     LV L MP + +++LW+  +
Sbjct: 662 YHNNFSGNLNFLSN----NLRYLLWHGYPFTSLPSNFEPYYLVELNMPHSNIQRLWEGRK 717

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDELEN--LEYLTVKG-TTIRELPESLGRLSWVK 607
            LP            ++ + K L   P       LE L   G T + ++  S+G L+ + 
Sbjct: 718 DLPYLK-------RMDLSNSKFLTETPKFFWTPILERLDFTGCTNLIQVHPSIGHLTELV 770

Query: 608 RLILSNNSNLERIPESI-RHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEK 664
            L L N S+L  +   I  +L  L  L +S C +L+  P+     NL  L    CTSL  
Sbjct: 771 FLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTKLEKTPDFTGASNLEYLDMDGCTSLST 830

Query: 665 LPAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
           +   + +++ + +++L  C  L   PN ++ I 
Sbjct: 831 VHESIGAIAKLRFLSLRDCIILAGIPNSINTIT 863



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 15/144 (10%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLP-------DELENLEYLTVKGTTIRELPESLGRLS 604
           +P+S+ T  + +T ++  C  L  LP         +E+L +L V    + ++P+++G L 
Sbjct: 855 IPNSINTITSLVTLDLRGCLKLTTLPLGQNLSSSHMESLIFLDVSFCNLNKVPDAIGELH 914

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC--NLGLLSARNCTSL 662
            ++RL L  N N + +P +  +L +L++L ++HC +L+  P +P   +L L+      S 
Sbjct: 915 CLERLNLQGN-NFDALPYTFLNLGRLSYLNLAHCHKLRAFPHIPTLKDLSLVG-----SY 968

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKL 686
            KL +G     S LYV  C  +KL
Sbjct: 969 FKLVSGSRDHRSGLYVFDCPKVKL 992



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 23/130 (17%)

Query: 570 CKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C  LE+ PD     NLEYL + G T++  + ES+G ++ ++ L L +   L  IP SI  
Sbjct: 802 CTKLEKTPDFTGASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINT 861

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY--VNLCNFL 684
           ++ L  L +  C +L TLP     LG    +N +S        S M S+++  V+ CN  
Sbjct: 862 ITSLVTLDLRGCLKLTTLP-----LG----QNLSS--------SHMESLIFLDVSFCNLN 904

Query: 685 KLDPNELSEI 694
           K+ P+ + E+
Sbjct: 905 KV-PDAIGEL 913


>gi|342365842|gb|AEL30375.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 932

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 296/974 (30%), Positives = 444/974 (45%), Gaps = 183/974 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FTSHL+  L+   I T+IDD  +R GD IS  LL  IE S  A+I
Sbjct: 21  YHVFLSFRGEDTRTRFTSHLYAALNRNGITTYIDDNNLRKGDVISDELLKAIEESMFAVI 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS W                      FY V+PS VR Q  +FG  F++  +R 
Sbjct: 81  VLSPNYASSSWCLDELCKILDCSKKLGQHIVTVFYDVEPSDVRHQKGAFGEAFTKHEQRQ 140

Query: 100 P-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             EK+K+W++ALT+ A  SG+ S   R E++L+E I+  + + L     S  K L+G++ 
Sbjct: 141 DGEKVKKWRDALTQVAAYSGWHSKN-RNEAELVESISKHIHEILIPKLPSSMKNLIGIDS 199

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E++   + +G   V  + IWG+GGI                         VRE  E  
Sbjct: 200 RVEQVICQIGLGLNDVRYIGIWGMGGI-------------------------VRERCEKK 234

Query: 219 GIKDLQKKLLSELS---------KDGNM-----------------RNIESQLNRLARKKV 252
            I D+QK+LL ++           DG                    N E QL  LA ++ 
Sbjct: 235 DIPDIQKQLLDQMGISSTALYSEYDGRAILQNSLRLKKVLLVLDDVNHEKQLENLAGEQ- 293

Query: 253 RIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
               D   SGSR+IITTRD+ +L+    ++ Y ++ LV  +A  LFC  AF         
Sbjct: 294 ----DWFGSGSRIIITTRDQHLLQEQGVHETYEVEGLVEIEAFNLFCSKAFKLPEPTEGF 349

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++LT + + Y+ G+PLALKVLG YL  RS EVW SA+ K++   H +I +VLKISYD LD
Sbjct: 350 LDLTKEVVNYSGGLPLALKVLGSYLYCRSIEVWHSAIGKIKNSSHSDIIDVLKISYDGLD 409

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD--ASKSLINLDLFYR---------------IRM 415
             +KN+FLDI+CF +G  RD    I       + I +D+                  ++M
Sbjct: 410 SMEKNIFLDISCFFKGRSRDYATKILKLCGHHAEIGIDILINRSLVTIEQDKYGEDTLKM 469

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL+ +MG+ IV +ES +   KR+RLW   DI  VL++N  T+A   I L   +   E++
Sbjct: 470 HDLIEEMGKLIVNQESPDDASKRSRLWCEDDIDLVLRQNKETKATRSIVLYDKR--DELY 527

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--KLV 533
            N  AFS + +L+ L   G K+  + +    +P   +R L W  CP++TL    E  +LV
Sbjct: 528 WNDLAFSNICQLKLLILDGVKSPILCN----IP-CTLRVLHWNGCPMETLPFTDEHYELV 582

Query: 534 SLKMPCTKVEQLWDDVQ--------RLPSSLCTFKTP-----ITFEIIDCKMLERLPDEL 580
            + +  +K+  +W   +         L +S    +TP        E +D      L D  
Sbjct: 583 EIDLYLSKIVHVWHGKKFLEKLKYLNLSNSHNLKQTPDLSGAPNLETLDLSCCSELNDIH 642

Query: 581 EN-------LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
           ++       LE   +K  +++ L + L  +S +K L L   ++L ++P+    + +L+ L
Sbjct: 643 QSLIHHKNLLELNLIKCGSLQTLGDKL-EMSSLKELDLYECNSLRKLPKFGECMKRLSIL 701

Query: 634 FISHCERLQTLPELPCNL-GL--LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN- 689
            +S C  +  LP    NL GL  L  + C  L  LP  +S + S+  +++ +     PN 
Sbjct: 702 TLS-CTGITELPTTVGNLVGLSELDLQGCKRLTCLPDTISGLKSLTALDVSDC----PNL 756

Query: 690 --------ELSEIVKDGWMK---------HSLYEERGIKKSMYFPGNEIPKWFRHQSMGS 732
                        +   W K          S  ++      M   G EIP WF H+  G+
Sbjct: 757 LLQSLDSLSTLTSLLLSWNKCVEACCAFAASASQDGDDVMQMLVAGEEIPSWFVHREEGN 816

Query: 733 SATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE 792
             T  T P     + + I+ A C           FR +S      G    +C   +  +E
Sbjct: 817 GIT-ATFP-----HTETIALAIC-----------FRLRSTSRRIRGEPSVICNGEEFITE 859

Query: 793 GHLYSWFLGKISYVESDHVFLGCNSFGGEYF-GPNYDEFSFRIHCSFHFP-PYLERGEVK 850
             L    +G      S H FL C     +YF   +  ++ F++     FP  Y     V+
Sbjct: 860 TLLAMPLIGY-----SPHFFLLC--LRSDYFVDQSCQDYLFQM----LFPNDYYGDITVE 908

Query: 851 KCGIHFVYAQDSAD 864
             G  +V  QD  D
Sbjct: 909 SSGARWVCTQDIQD 922


>gi|358248732|ref|NP_001239675.1| TMV resistance protein N-like [Glycine max]
 gi|295083323|gb|ADF78115.1| rj2 protein [Glycine max]
 gi|295083325|gb|ADF78116.1| rj2 protein [Glycine max]
 gi|295083327|gb|ADF78117.1| rj2 protein [Glycine max]
 gi|308171400|gb|ADO15994.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1051

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 266/759 (35%), Positives = 379/759 (49%), Gaps = 113/759 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY-----RI 413
           + QKNVFLDIAC        +V  I  A               KSLI     +     R+
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI QVL+ N GT  IE I LD     +E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIQVLEDNKGTSEIEIICLDFPCFGKE 551

Query: 474 --IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
             + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +   
Sbjct: 552 EIVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFHP 607

Query: 530 EKLVSLKMPCTKVEQL-WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
           +KL   K+P + +    WD + ++      F    T     CK L ++PD   L NLE  
Sbjct: 608 KKLSICKLPYSCISSFEWDGLWKM------FVNLRTLNFDGCKCLTQIPDVSGLPNLEEF 661

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           + +                          NL  +  SI  L KL  L    C+RL++ P 
Sbjct: 662 SFEHCL-----------------------NLITVHNSIGFLDKLKTLNAFRCKRLRSFP- 697

Query: 647 LPCNLGLLSARN---CTSLEKLPAGLSSMSSVLYVNLCN 682
            P  L  L   N   C SLE  P  L  M ++  + L N
Sbjct: 698 -PIKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSN 735


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 261/804 (32%), Positives = 382/804 (47%), Gaps = 169/804 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL+  L  + I TF DD+ L  GD+I + LL  IE S +A+I
Sbjct: 20  YVVFLSFRGEDTRKTFTGHLYEGLRNRGINTFQDDKRLEHGDSIPKELLRAIEDSQVALI 79

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IFS+ YA+SRW                       FY VDPSHVR Q+ SFG  F++   +
Sbjct: 80  IFSKNYATSRWCLNELVKIMECKEEENGQTVIPIFYNVDPSHVRYQTESFGAAFAKHESK 139

Query: 99  FP------EKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRL--DATFQS 148
           +       +K++RW+ ALT AA+L G+D   IR   ES+ I++I + +  +   +A   S
Sbjct: 140 YKDDVEGMQKVQRWRTALTAAANLKGYD---IRNGIESENIQQIVDCISSKFCTNAYSLS 196

Query: 149 KNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
             + +VG+   +E+++S L I    V  L IWGIGG+ K  IA A+F+ +S  FE S F 
Sbjct: 197 FLQDIVGINAHLEKLKSKLQIEINDVRILGIWGIGGVGKTRIAKAIFDTLSYQFEASCFL 256

Query: 209 LNVREAEETGGIKDLQKKLLSELSKDGN---MRNIESQL---NRLARKKVRIVFDDVT-- 260
            +V+E  +   +  LQ  LLSEL +  N       + +    NRL   KV IV DD+   
Sbjct: 257 ADVKEFAKKNKLHSLQNILLSELLRKKNDYVYNKYDGKCMIPNRLCSLKVLIVLDDIDHG 316

Query: 261 --------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                         +GSRVI+TTR+K +++    +  Y +  L   +A +LF   AF  +
Sbjct: 317 DQMEYLAGDICWFGNGSRVIVTTRNKHLIEK--DDAIYEVSTLPDHEAMQLFNMHAFKKE 374

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
             +    EL  + + +A+G+PLALKV GC L  ++  +W+  + +++   + EI E LKI
Sbjct: 375 VPNEDFKELALEIVNHAKGLPLALKVWGCLLHKKNLSLWKITVEQIKKDSNSEIVEQLKI 434

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRI 413
           SYD L+  ++ +FLDIACF  GE R EV+ I  +             +KSL+ +    RI
Sbjct: 435 SYDGLESEEQEIFLDIACFFRGEKRKEVMQILKSCDFGAEYGLDVLINKSLVFISENDRI 494

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+RDMGR +V+ + +    KR+R+W  +D  +V+   TGT  +E I         E
Sbjct: 495 EMHDLIRDMGRYVVKMQKLQK--KRSRIWDVEDFKEVMIDYTGTMTVEAIWF---SCFEE 549

Query: 474 IHMNSYAFSKMPKLR-------FLRFY--------------GDKNKCMVSHL-EGVPFA- 510
           +  N  A  KM +LR       F++F+               D    +V H  + + +  
Sbjct: 550 VRFNKEAMKKMKRLRILHIFDGFVKFFSSPPSSNSNDSEEEDDSYDLVVDHHDDSIEYLS 609

Query: 511 -EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS--------SLCTF 559
             +R L W     K+L  N   EKLV L++  + +  LW   + LPS        S    
Sbjct: 610 NNLRWLVWNHYSWKSLPENFKPEKLVHLELRWSSLHYLWKKTEHLPSLRKLDLSLSKSLV 669

Query: 560 KTP--------------------------------ITFEIIDCKMLERLP-DELENLEYL 586
           +TP                                I   +  C  L R P   +E+LE L
Sbjct: 670 QTPDFTGMPNLEYLNLEYCSKLEEVHYSLAYCEKLIELNLSWCTKLRRFPYINMESLESL 729

Query: 587 TVK------------------------GTTIRELPESLGRLSWVKRLILSNNSNLERIPE 622
            ++                         T I ELP SL   + +  L LS   NLE +P 
Sbjct: 730 DLQYCYGIMVFPEIIGTMKPELMILSANTMITELPSSLQYPTHLTELDLSGMENLEALPS 789

Query: 623 SIRHLSKLTFLFISHCERLQTLPE 646
           SI  L  L  L +S+C  L++LPE
Sbjct: 790 SIVKLKDLVKLNVSYCLTLKSLPE 813



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 31/189 (16%)

Query: 570  CKMLERLPDELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            C +   + + L +LE L +  +   +  +PE +G LS +K L L  + N   +P+SI  L
Sbjct: 860  CFVFPPVNNGLLSLEILELGSSNFEDGRIPEDIGCLSSLKELRLEGD-NFNHLPQSIAQL 918

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
              L FL+I  C  L +LPE P  L  + A     L         +   L++N+ +F    
Sbjct: 919  GALRFLYIKDCRSLTSLPEFPPQLDTIFADWSNDL---------ICKSLFLNISSF---- 965

Query: 688  PNELSEIVKDGWMKHSLYEERGIKKSMYFP-GNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
                         +H++     +   ++   G+ IP WF HQ   +S ++   P      
Sbjct: 966  -------------QHNISASDSLSLRVFTSLGSSIPIWFHHQGTDTSVSVNL-PENWYVS 1011

Query: 747  NKLISFAFC 755
            +  + FA C
Sbjct: 1012 DNFLGFAVC 1020


>gi|227438157|gb|ACP30568.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1030

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 276/954 (28%), Positives = 426/954 (44%), Gaps = 189/954 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VF SF GED R NF SH    L  K I TFID ++ R   I   L+  I  S +A+I+
Sbjct: 12  FNVFPSFCGEDLRKNFLSHFLKELQRKGITTFIDHEIKRSKAIGPELVAAIRGSRMAVIL 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPS VRKQ+  FG  F      + 
Sbjct: 72  LSKNYASSTWCLNELLEIMSCKEEIGQTVMPVFYEVDPSDVRKQAGDFGNIFEETCLGKS 131

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E  +RW  ALT+ A+L+G DS +   E+ +IE++A D+   L+ T       LVG+E  
Sbjct: 132 EEVRQRWSRALTDLANLAGVDSRLWNNEADMIEKLALDISSALNVTPSRDFDDLVGIEAH 191

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA----- 214
           I+ ++ LL + S  V  + +WG  GI K TIA A++ ++S  F+ S F  N++E      
Sbjct: 192 IKNLKPLLSLESSEVRIVGVWGPAGIGKTTIARALYTRLSPIFQHSAFMGNIKETYRRIS 251

Query: 215 -EETGGIKDLQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT----------- 260
            ++ G    LQ++ LS+L    +++   S +   RL  K+V +V DDV            
Sbjct: 252 LDDYGSKLHLQEEFLSKLINHKDVKIPHSGVVRERLKDKRVFVVLDDVDELEQLIALAKE 311

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI-E 314
                SGSR+++TT+D+Q+LK    +  Y+++     +A ++FCQ AFG  H     I E
Sbjct: 312 PRWFGSGSRIVVTTQDRQLLKAHGIDLVYKVELPSRLEALEIFCQSAFGQKHPPCVGIRE 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +    A  +PL L VLG YL G SKE WE A+ +L      +I + L+ SYD+L   
Sbjct: 372 LALQVTHLAGYLPLGLTVLGSYLRGFSKEEWEYAIPRLNTSLDGKIXKTLRFSYDALHSK 431

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
            K++FL IAC   G++  +V  + +             A KSLI+   + RI MH LL+ 
Sbjct: 432 DKSIFLHIACLFNGKNVXDVKMLLENSNLDVDHGLKALADKSLIDTH-WGRIHMHSLLQK 490

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MGREIV ++S++ PGKR  L   ++I  VL   +GT  + GIS D +K+N E+ ++  AF
Sbjct: 491 MGREIVCQQSVHEPGKRQFLVDAEEIRDVLACKSGTATVLGISFDASKINGELSISKKAF 550

Query: 482 SKMPKLRFLRFYGDKN-KCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLK 536
             M  L+FL  Y   N +  ++  +G+ +   ++R L W   P+++L     AE LV L+
Sbjct: 551 KGMHNLQFLEIYKKWNGRSRLNLPQGLNYLPHKLRLLHWDSFPMRSLPSKFSAEFLVELR 610

Query: 537 MPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLPDEL 580
           M  +K+E+LW+ +  L S                +L        F    C+ L   P   
Sbjct: 611 MRFSKLEKLWEGIIPLRSLKVMDVSYSRKLKEIPNLSNATNLKKFSADGCESLSAFPHVP 670

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL---------- 630
             +E L +  T I E+P  +  L  ++R+ ++  S L  I  ++  L  L          
Sbjct: 671 NCIEELELSYTGIIEVPPWIKNLCGLQRVCMTQCSKLTNISMNVSKLENLEEVDFSGSVD 730

Query: 631 -----------------------------------------TFLFISHCERLQTLPELPC 649
                                                      L +S  E ++T+P+   
Sbjct: 731 GILFTAIVSWLSGVKKRLTIKANNIEEMLPKCLPRKAYTSPVLLDLSGNEDIKTIPDCIK 790

Query: 650 NLGLL------SARNCTSLEKLPAGLSSMSSV----------------LYVNLCNFLKLD 687
           +   L        R  TSL +LP  LS +++                 + +N  N LKL+
Sbjct: 791 HFSQLHKLDVGKCRKLTSLPQLPESLSELNAQECESLERIHGSFHNPDICLNFANCLKLN 850

Query: 688 PNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN 747
             E  E++     ++++            PG E P  F+ Q+ G    +     RP    
Sbjct: 851 -REARELICASPSRYTI-----------LPGEEQPGMFKDQTSGDLLKVVHMIQRP---- 894

Query: 748 KLISFAFCAVVVFPAFLKY------FRHKSGEDDWDGNVYAVCCDWKRKSEGHL 795
                       FP FL+Y          +  DD  G +  V C  +R  +G +
Sbjct: 895 ------------FPRFLRYKACIRLLARSAVYDDDSGGIARVACCIRRICDGSV 936


>gi|15239700|ref|NP_199688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758876|dbj|BAB09430.1| disease resistance protein [Arabidopsis thaliana]
 gi|332008339|gb|AED95722.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1190

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 260/793 (32%), Positives = 378/793 (47%), Gaps = 109/793 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR    SHL+  L  K I TF DDQ L  GD+IS  L   IE S  A++
Sbjct: 14  YDVFLSFRGEDTRRTIVSHLYAALGAKGIITFKDDQDLEVGDHISSHLRRAIEGSKFAVV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR-KR 98
           + SERY +SRW                      FY VDPS VR Q  SFG    R +   
Sbjct: 74  VLSERYTTSRWCLMELQLIMELYNLGKLKVLPLFYEVDPSDVRHQRGSFG--LERYQGPE 131

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
           F + ++RW+ AL   A+LSG  S     E+ ++EEI   +  RL +   +  + LVG+E 
Sbjct: 132 FADIVQRWRVALCMVANLSGMVSRYCADEAMMLEEIVEVISSRLASMQATSFEDLVGMEA 191

Query: 159 SIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            +E I  LL    +  VC + IWG+GGI K TIA  ++ +++  F    F  +V +  + 
Sbjct: 192 HMENIRPLLKKDFDAEVCMVGIWGMGGIGKTTIAKYLYEQLASQFPAHSFIEDVGQICKK 251

Query: 218 GGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS---------- 261
             +K +Q++LL ++  +K   + +I++  N    RL   KV  V D V            
Sbjct: 252 VDLKCIQQQLLCDILSTKRVALMSIQNGANLIRSRLGTLKVLFVLDGVDKVEQLHALAKE 311

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD--HLDASHI 313
                 GSR+IITTRD+++L +C    KY +K L   D+ K+    AF G    LD  + 
Sbjct: 312 ASWFGPGSRIIITTRDRRLLDSCRVTNKYEVKCLQNEDSLKIVKNIAFAGGVPTLDG-YE 370

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
               +A + AQG+PLAL   G +L G  S + WE A+  LE  PH  I ++L+ SY +LD
Sbjct: 371 RFAIRASQLAQGLPLALVAFGSFLRGATSIDEWEDAIDTLETAPHQNIMDILRSSYTNLD 430

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDMG 423
              K +F+ +AC   GE    V ++           A KSLI++     I +H L++ M 
Sbjct: 431 LRDKTIFIRVACLFNGEPVSRVSTLLSETKRRIKGLAEKSLIHISKDGYIDIHSLIKQMA 490

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           REIV +ES+  P ++  LW   + Y VL+  TGTE I+G++L M ++ R   ++  AF +
Sbjct: 491 REIVVEESLYIPRQQRILWDPHNSYGVLESKTGTERIQGMTLHMCELPRAASIDGSAFEQ 550

Query: 484 MPKLRFLRFYGDKNK-----CMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
           M  L FL+F+   N       + S    V    +R L W   PL TL       +LV L 
Sbjct: 551 MENLIFLKFFKHLNDRESKLNINSKNRMVLPRSLRLLHWDAYPLTTLLPTFPLSRLVELH 610

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           +  + +E LWD       SL   +     ++   K L +LPD                  
Sbjct: 611 LRYSNLENLWDGKM----SLLELRM---LDVTGSKNLTKLPD------------------ 645

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
              L R + ++ LI    + LE+IPE+I  L  L  L +SHC+RL  L  +   +G L A
Sbjct: 646 ---LSRATKLEELIAKGCTRLEQIPETIGSLPSLKKLDVSHCDRLINLQMI---IGELPA 699

Query: 657 RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF 716
                L+K   GL   +S+ + +    L    N L+ +   G +   L   RG    + F
Sbjct: 700 -----LQKRSPGLFRQASLSFPDAVVTL----NSLTSLAIHGKLNFWLSHLRGKADHLCF 750

Query: 717 PGNE-IPKWFRHQ 728
              +  P  F  Q
Sbjct: 751 SSEQWTPNKFLKQ 763



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            EL  +    + +  L LS N ++  +P +IR L  L  L ++ C++L+++ +LP NL  L
Sbjct: 913  ELSYTFSHCTNLTYLDLSGN-DMVTMPVTIRFLRLLNTLCLNDCKKLKSMVQLPPNLTSL 971

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
             AR CTSLE +   L    S+ +V+L    KL  NE++ ++ D +++    EE   ++  
Sbjct: 972  YARGCTSLEIIHLPLD--HSIKHVDLSYCPKL--NEVANLM-DRFLRCGRKEEVP-QRFA 1025

Query: 715  YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
               G+ +P +F +Q+   S  +   P   A  ++ + F  C ++ 
Sbjct: 1026 CLSGSRVPIYFDYQAREYSREISIPPIWHA--SEFVGFDACIIIA 1068



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 583 LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           L  L +    I  +P+ +G L  +++L LS N +   +P  + +LS +  L + +C +LQ
Sbjct: 805 LTELNLINLNIESIPDDIGLLQVLQKLDLSGN-DFTCLPTDMENLSSMKSLRLCNCLKLQ 863

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSS 671
           TLP+LP  L  L   NC  L+  P G S+
Sbjct: 864 TLPKLP-QLETLKLSNCILLQS-PLGHSA 890


>gi|357468821|ref|XP_003604695.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355505750|gb|AES86892.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1121

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 253/751 (33%), Positives = 373/751 (49%), Gaps = 116/751 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L +K I TFIDD +L RGD I+ SLL  I+ S I II
Sbjct: 16  YDVFLSFRGTDTRYGFTGNLYEALRVKGIHTFIDDRELQRGDQITPSLLKAIQESKIVII 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-----R 94
           +FS  YASS +                      FY V+PSHVR Q+ S+G   +     R
Sbjct: 76  VFSNHYASSSFCLDELVHIIHCSKENGCLVLPIFYGVEPSHVRYQTGSYGEALAEHEEAR 135

Query: 95  LRKRFP---EKMKRWKNALTEAADLSGFDSNV-IRPESKLIEEIANDVLKRLDATFQSKN 150
            ++++    EK+++W+ AL +AA+LSG+  N     E + I+ I   V  +++ T     
Sbjct: 136 KKEKYKDNMEKLQKWEMALKQAANLSGYHFNARTGYEYEFIQMIVTYVSNKINHTPLHVA 195

Query: 151 KGLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
              VG+E  + ++ SLL IGS + V  L I+G GG+ K T+  A++N I+  FE   F  
Sbjct: 196 DYPVGLEPRVLKLYSLLDIGSNDKVQMLGIYGTGGMGKTTLGKAIYNFIAHQFECLCFLP 255

Query: 210 NVRE-AEETGGIKDLQKKLL-----SELSKDGNMRNIESQLNRLARKKVRIVFDDVTS-- 261
           NVRE + +  G++ LQ K+L      E+        I     RL RKKV ++ DD+    
Sbjct: 256 NVRENSTKVDGLEYLQSKVLFKTIGLEIRFGDISEGIPIIKKRLQRKKVLLILDDIDKLK 315

Query: 262 --------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                         GSRVIITTRDK +LK    +  Y +  L   +A +L    AF    
Sbjct: 316 QLQVLAGEPDWFGLGSRVIITTRDKHLLKCHGIDITYEVDGLNENEALQLLRWKAFKNST 375

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
           ++ S+  + ++ + YA G+PLAL+V+G  L G+  E W+S + + E IP+ EI+++L +S
Sbjct: 376 VNPSYEGILNRVVTYASGLPLALEVVGSNLFGKDIEKWKSLLDEYERIPNKEIQKILIVS 435

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRI 413
           +++L + +++VFLDIAC  +G   DEV  I  A               KSLI + L  R+
Sbjct: 436 FNNLGEYEQSVFLDIACCFKGYSLDEVEYILCAHYGYCMKYHIGKLVDKSLIKIQL-SRV 494

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            +HDL+  MG+EIVRKES+  PGKR RLW  +DI +VLK+NTGT   E I LD + +   
Sbjct: 495 TLHDLIEIMGKEIVRKESVIEPGKRTRLWFCEDIVRVLKENTGTGNTEIIHLDFSSIKEV 554

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF---AEVRHLEWPQCPLKTLNICAE 530
           +  N  AF KM  L+ L            H    P    + +R LEW + P         
Sbjct: 555 VDWNGKAFKKMKILKTLVIKS-------GHFSKAPVYFPSTLRVLEWQRYP--------- 598

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
                              Q LPSS+    + I+    D K       + +  EYL +  
Sbjct: 599 ------------------SQCLPSSIFNKASKISL-FSDYKFENLKILKFDYCEYL-IDT 638

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-C 649
             +  LP        ++++   +  NL  I  S   L+KL FL +  C +L+  P L   
Sbjct: 639 PDVSCLPN-------LEKISFQSCKNLVTIHNSTGFLNKLKFLSVEGCCKLRYFPPLELI 691

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           +L  L    C SL+  P  L  + ++ Y+++
Sbjct: 692 SLENLQISRCKSLQSFPKILGKIENLKYLSI 722


>gi|223452605|gb|ACM89629.1| resistance protein [Glycine max]
          Length = 1001

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 284/885 (32%), Positives = 412/885 (46%), Gaps = 173/885 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD+ L +G  I+++L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+VDPS VR    SFG     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L+  + EK++ WK AL + ++ SG  F  +  + E   I+EI   V  + +      +  
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  +  ++SLL +G++ V  +  I G+GG+ K T+A AV+N I+ HFE   F  NV
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMRNIESQLN------RLARKKVRIVFDDVTS---- 261
           RE     G++ LQ  LLS+   D  +    S+        +L  KKV +V DDV      
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-L 308
                       GSRVIITTRD+Q+L      + Y+++EL    A +L  Q AFG +  +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++A+ YA G+PLALKV+G  L G+S E WES +   E  P   I   LK+SY
Sbjct: 368 DPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-- 412
           D+L++ +K++FLDIAC  +     +V  I  A               KSLIN+   +   
Sbjct: 428 DALNEDEKSIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDK 487

Query: 413 --IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
             +R+HDL+ D+G+EIVR+ES   PGKR+RLW H+DI +VL++      +  + LD    
Sbjct: 488 EVMRLHDLIEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKSVVNLTSLILDECDS 547

Query: 471 NREIHMNSYAFSKMPKLRFLR---------FYGDKNKCMVSHLEGVP------------- 508
             EI  +    SK+ KL F             G   K  + + EG P             
Sbjct: 548 LTEIP-DVSCLSKLEKLSFKDCRNLFTIHPSVGLLGKLKILNAEGCPELKSFPPLKLTSL 606

Query: 509 -------------FAE-------VRHLEWPQCPLKTL-----NICAEKLVSLKMPCTKVE 543
                        F E       +  L+  +CP+  L     N+   + + L       +
Sbjct: 607 ESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQELELDHGPESAD 666

Query: 544 QLWD-DVQRLPSSLCTFKTPITFEIIDCKMLER-LPDELENLEYLTVKGTTIRELPESLG 601
           QL D D   L S++C    P  ++I   ++  R LPD  + L+  +V  +++  L   L 
Sbjct: 667 QLMDFDAATLISNICMM--PELYDISARRLQWRLLPD--DALKLTSVVCSSVHSLTLELS 722

Query: 602 R------LSW---VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
                  LSW   V+ L L   S    IPE I+    L+ L +S C+RLQ +  +P NL 
Sbjct: 723 DELLPLFLSWFVNVENLRL-EGSKCTVIPECIKECRFLSILILSGCDRLQEIRGIPPNLE 781

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK 712
             +A     L       SS+S +L                E+ + G    SL        
Sbjct: 782 RFAATESPDLTS-----SSISMLLN--------------QELHEAGHTDFSL-------- 814

Query: 713 SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
               P  +IP+WF  QS G S     R   PA         FC V
Sbjct: 815 ----PILKIPEWFECQSRGPSIFFWFRNEFPA-------ITFCIV 848


>gi|255553307|ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223543328|gb|EEF44860.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1186

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 280/868 (32%), Positives = 415/868 (47%), Gaps = 169/868 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR NFT HL+  L  + I TF DD  I RG++I   +   I  S +++I
Sbjct: 20  YHVFLSFRGGDTRKNFTDHLYTALVQEGIHTFRDDDEIKRGEDIELEIQRAITESKLSVI 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASSRW                      FY V+P  VR Q+ S+G  F++  K F
Sbjct: 80  VLSKDYASSRWCLDELVLIMERRKLVGHVVVPVFYDVEPYQVRNQTGSYGEAFAKHEKDF 139

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E M R   W+ AL EAA+L G    V++   ES+ I+ I  +V  +L  T       LV
Sbjct: 140 KEDMSRVEEWRAALKEAAELGGM---VLQDGYESQFIQTIVKEVENKLSRTVLHVAPYLV 196

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G E  +  I   L  GS+ V    I+GIGGI K TIA  V+N+  R F+G  F  NV+E 
Sbjct: 197 GTESRMARITRWLRDGSDDVEIATIYGIGGIGKTTIAKIVYNQNFRSFDGRSFLANVKEI 256

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIV---------FDD 258
           +E+  G+  LQ++LLS+L K    +  N++  +    + L +K+V ++         F+ 
Sbjct: 257 SEQPNGLARLQRQLLSDLLKKNTSKIYNVDEGIMKIKDALFQKRVLLILDDVDDLEQFNA 316

Query: 259 VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           + +       GS++IITTR + +       +++ +++L   ++ +LFC  AF  DH    
Sbjct: 317 IVAMREWCHPGSKIIITTRHEHLQGVDGICRRFEVEKLNDKESLQLFCWHAFRQDHPADG 376

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + + +   + +  G+PLAL+VLG  L G++  VWESA+ KLE +   +I+ +L+IS+DSL
Sbjct: 377 YEKHSKDVVHHCGGLPLALQVLGSSLSGKTVSVWESALEKLEKVADSKIQHILRISFDSL 436

Query: 372 -DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
            DD  K +FLDIACF  G     V  I D               + LI +   Y++ MH 
Sbjct: 437 QDDHDKRLFLDIACFFTGMDIGYVFRILDGCGFYAVIGIQNLIDRCLITISDKYKLMMHQ 496

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL------------ 465
           LL DMGREIVR+ES + PGKR+RLW  KD  +VL++NTGTE+I+G+ L            
Sbjct: 497 LLGDMGREIVRQESPDDPGKRSRLWDPKDATKVLRQNTGTESIKGLILKLPTQTENKRTR 556

Query: 466 -----DMNKVNRE-------IHMNSY---------------AFSKMPKLRFLRF-YGDKN 497
                D  K N E       +   SY               AF KM +L+ L   Y + +
Sbjct: 557 KDATADHTKENGEEDLSDDLLDQKSYSKKPNTSPTNSFSTKAFEKMVRLKLLNLNYVELS 616

Query: 498 KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQ------- 550
           +      +G+ +   R       P    ++C +KLV+L M  + ++ LW  ++       
Sbjct: 617 EGYKKFPKGLVWLCWRGFSLNALP---TDLCLDKLVALDMRNSNLKYLWKGIRFLVELKV 673

Query: 551 -RLPSSLCTFKTP--------------------------------ITFEIIDCKMLERLP 577
             L  S    +TP                                I F + DCK L++LP
Sbjct: 674 LNLSHSHGLVRTPNFTGLPTLEKLVLKDCKDLVDVDKSIGGLDKLIIFNLKDCKNLKKLP 733

Query: 578 DE---LENLEYLTVKGT-TIRELPESLGRLSWVKRLILSN------NSNLERIPE---SI 624
            E   L +LE L + G   + ELP+ L  L  ++ L L        NS  E   E   S+
Sbjct: 734 VEITMLHSLEELILSGCLNLVELPKDLENLQSLRVLHLDGIPMNQVNSITEDFKELSLSL 793

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLS-ARNCTSLEKLPAGLSSMSSVLYVNLC-N 682
           +HL+  ++L     +   +L  LP  L  LS A  C S   +P  LS + S+ Y+NL  N
Sbjct: 794 QHLTSRSWLLQRWAKSRFSLSSLPRFLVSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGN 853

Query: 683 FLKLDPNELSEIVKDGWMKHSLYEERGI 710
             +  P  ++ +     M HSL  +R I
Sbjct: 854 PFRFLPESINSL----GMLHSLVLDRCI 877



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 164/404 (40%), Gaps = 99/404 (24%)

Query: 501  VSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK 560
            V HL+G+P  +V  +       K L++  + L S       + Q W   +   SSL  F 
Sbjct: 768  VLHLDGIPMNQVNSITED---FKELSLSLQHLTSRSW----LLQRWAKSRFSLSSLPRFL 820

Query: 561  TPITFEIIDCKMLER-LPDELE---NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSN 616
              ++  + DC + +  +P +L    +LEYL + G   R LPES+  L  +  L+L     
Sbjct: 821  --VSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGNPFRFLPESINSLGMLHSLVLD---- 874

Query: 617  LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK---LPAGLSSMS 673
                                 C  L+++PELP +L  L A +CTSLE+   LP  L S++
Sbjct: 875  --------------------RCISLKSIPELPTDLNSLKAEDCTSLERITNLPNLLKSLN 914

Query: 674  SVLY-----VNLCNFLKLDP--NELSEIVKD----------------------GWMKHSL 704
              ++     V +    KL+P  N  ++I+K                         M+ S+
Sbjct: 915  LEIFGCDSLVEVQGLFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALACTEMRTSI 974

Query: 705  --YEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPA 762
               +E GI  S++ PGN IP+WF  +S  SS + +    +P   +K+   + C +  +  
Sbjct: 975  QVLQECGI-FSIFLPGNTIPEWFNQRSESSSISFEVE-AKPG--HKIKGLSLCTLYTYDK 1030

Query: 763  FLKYFRHKSGEDDWDGNVYAVCCDWKRKS--EGHLYS-WFLGKISYVESDHVFLGCNSFG 819
                        +  G +   C     K+  E   YS  F G    +E + ++L   +FG
Sbjct: 1031 L-----------EGGGYIDENCAKINNKTICEKWTYSPTFYGMPKPLE-EMLWLSHWTFG 1078

Query: 820  GEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSA 863
             +       E    +H        L    VKKCGI  +Y ++S 
Sbjct: 1079 DQL------EVGDEVHILVEMASGL---TVKKCGIRLIYEEEST 1113


>gi|357456967|ref|XP_003598764.1| Resistance protein [Medicago truncatula]
 gi|355487812|gb|AES69015.1| Resistance protein [Medicago truncatula]
          Length = 1185

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 256/793 (32%), Positives = 403/793 (50%), Gaps = 113/793 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLS-LKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           YDVFLSFRG DTR+NFT +L+H L   + I+TF+DD+ I +G+ I+ +LL  I+ S I I
Sbjct: 18  YDVFLSFRGIDTRNNFTGNLYHSLHHQRGIQTFMDDEEIQKGEEITPTLLQAIKQSRIFI 77

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            IFS  YASS +                      FY VDPS +R  + ++   F++   R
Sbjct: 78  AIFSPNYASSTFCLTELVTILECSMLQGRLFLPVFYDVDPSQIRNLTGTYAEAFAKHEVR 137

Query: 99  FPE----KMKRWKNALTEAADLSGFDSNV-IRPESKLIEEIANDVLKRLDATFQSKNKGL 153
           F +    K+++W++AL +AA++SG+        E K+IE+I  +V  +++          
Sbjct: 138 FGDEKDSKVQKWRDALRQAANVSGWHFKPGFESEYKIIEKIVEEVSVKINRVPLHVATNP 197

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +G+E  I E+ SLL + S E V  + I+GIGGI K T A AV N I+  FEG  F  ++R
Sbjct: 198 IGLESQILEVTSLLGLDSNERVSMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIR 257

Query: 213 EAEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS----- 261
           + E    +  LQ+ LLS++  + ++      R +     RL RKKV ++ D+V       
Sbjct: 258 KREINHDLARLQEALLSDILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKVQQLQ 317

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS+VI+TTRDK +L      K Y +K+L    A +LF   AF    +D  
Sbjct: 318 AFVGHGWFGFGSKVIVTTRDKHLLATHGIVKVYEVKQLKSEKALELFSWHAFKNKKIDPC 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           ++++  + + Y  G+PLAL+V+G +L G+S  VW+S++ K + +   +I E+LK+SYD L
Sbjct: 378 YVDIAKRLVTYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKGVLRKDIHEILKVSYDDL 437

Query: 372 DDSQKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIRMHD 417
           ++ +K +FLDIACF              L G H ++ I +    KSL+ +D+   +RMHD
Sbjct: 438 EEDEKGIFLDIACFFNSYEISYVKELLYLHGFHAEDGIQVL-IDKSLMKIDINGCVRMHD 496

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L++ MGREIVR+ES   PG+R+RLW   DI QVL++N GT+ +E I  ++ K  R++   
Sbjct: 497 LIQSMGREIVRQESTLEPGRRSRLWFSDDIVQVLEENKGTDTVEVIIANLRK-GRKVKWC 555

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
             AF  M  L+ L     +N    +  + +P   ++ L+W   P  +L      + L  L
Sbjct: 556 GKAFGPMKNLKILIV---RNAQFSNGPQILP-NSLKVLDWSGYPSSSLPSKFNPKNLAIL 611

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
            +P + ++           SL  F+     +   CK L +LP                  
Sbjct: 612 NLPESHLKWF--------QSLKVFEMLSFLDFEGCKFLTKLP------------------ 645

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPCNLG 652
              SL R+ ++  L L    NL RI +S+  L  L       C RL++L     LP +L 
Sbjct: 646 ---SLSRVPYLGALCLDYCINLIRIHDSVGFLGSLVLFSAQGCSRLESLVPYINLP-SLE 701

Query: 653 LLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGI 710
            L  R C+ L+  P  L  M ++  +Y++  +  +L P  +  +V  G  +  L   RG 
Sbjct: 702 TLDLRGCSRLDNFPEVLGLMENIKDVYLDQTDLYQL-PFTIGNLV--GLQRLYL---RGC 755

Query: 711 KKSMYFPGNEIPK 723
           ++ +  P   +PK
Sbjct: 756 QRMIQLPSYILPK 768


>gi|227438193|gb|ACP30586.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1001

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 240/740 (32%), Positives = 379/740 (51%), Gaps = 80/740 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF GED R NF SH    L  K IK F D+++ R  +I+ +L+  I  S IA++
Sbjct: 7   LYDVFPSFSGEDVRKNFLSHFLKELDRKLIKAFKDNEIERSHSIAPALVTAIRTSRIAVV 66

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS +YASS W                      FY +DPSHVRKQ+  FG  F++  K  
Sbjct: 67  VFSPKYASSSWCLDELVEIVRCMEELGQLVLPIFYGLDPSHVRKQTGKFGEGFAKTCKMK 126

Query: 100 PEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            + +K RW+ ALT  A+L G+ S     E+K+IE I ND+L +L+ T     +  VG+E 
Sbjct: 127 TKAVKIRWQQALTVVANLLGYHSQNFNNEAKMIEVIVNDLLGKLNFTPSKDFEECVGIED 186

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA-----LNVRE 213
            I E+  LL + SE V  + IWG  GI K TIA A+F ++SR F+ S F        + E
Sbjct: 187 HIAEMSLLLDMESEEVRMIGIWGPSGIGKTTIARALFGRLSRRFQCSVFIDRKFISKIME 246

Query: 214 AEETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----- 260
                   D      LQ+  LSE+  ++   + ++ +  NRL  +KV I  DD+      
Sbjct: 247 GYRGANPDDYNMKLSLQRHFLSEILGTRHIQIDHLGAVENRLKNQKVLISIDDLDDQVVL 306

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                      SGSR+I+ T+D+  L+    +  Y +       A ++ C+  F  +   
Sbjct: 307 DVLAGQAHWFGSGSRIIVVTKDRHFLRAHEIDHIYEVCLPSEERALEILCRSDFKQNSPR 366

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
               +L  +  ++A  +PL L VLG  L GR    W   +  L+     +IE++L+ISYD
Sbjct: 367 EGFEKLAVEVTRHAGSLPLGLTVLGSTLRGRDNAYWMDILPTLQNGVGEKIEKILRISYD 426

Query: 370 SLD-DSQKNVFLDIACFLEGEH--------RDEVISIFDASKSLINLDLFY----RIRMH 416
            LD +  K ++  IAC   GE          D  + +    ++L++  L +     + MH
Sbjct: 427 GLDREEDKVIYRHIACLFNGEKVPYIKLLLEDRNLGVNVGIENLVDKSLIHVRSDTVEMH 486

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL+++GR+IVR +SI+ PG R  L    DI  VL +N+GT+ + G++LDM+K++ E+H+
Sbjct: 487 SLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLSENSGTKKVLGVALDMDKIHDELHV 546

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKL 532
           +  AF  M  LRFL+FY    +  +   E   +  +++R L W + P++ L    C + L
Sbjct: 547 HENAFKGMSNLRFLKFYTFGKEARLRLNESFDYLPSKLRLLCWDKYPMRCLPSKFCPQNL 606

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L+M  + +E LW+ V    S L   K     ++   K L+ +PD  +  +LE L +KG
Sbjct: 607 VILEMKNSNLENLWEGV----SPLGHLK---KMDLWGSKNLKEIPDLSKATSLEKLDLKG 659

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
            +++ ELP S+ +L+ +  L +   +NLE +P  + +L  L  L +  C RL+  P +  
Sbjct: 660 CSSLVELPSSISKLNKLTELNMPACTNLETLPTGM-NLESLNRLNLKGCTRLRIFPNISR 718

Query: 650 NLGLLSARNCTSLEKLPAGL 669
           N+  L   + TS+ + P+ L
Sbjct: 719 NISEL-ILDETSITEFPSNL 737



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 40/256 (15%)

Query: 504 LEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI 563
           +EG+   ++     P  PL T+   + +++SL    + VE        LPSS        
Sbjct: 747 MEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSDIPSLVE--------LPSSFHNLHNLT 798

Query: 564 TFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNN---SNL 617
              I  CK LE LP    L +L  L + G + +R  P+       + R +L  N   + +
Sbjct: 799 NLSITRCKNLEILPTRINLPSLIRLILSGCSRLRSFPD-------ISRNVLDLNLIQTGI 851

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPC-NLGLLSARNCTSLEKLPAGLSSMSS-- 674
           E IP  +   S+L +LF+  C +L+ +      +L ++   NC +L    AG+    S  
Sbjct: 852 EEIPLWVEDFSRLKYLFMESCPKLKYVSISTLRHLEMVDFSNCGALTG--AGIIGYQSGE 909

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMK--------------HSLYEERGIKKSMYFPGNE 720
            +  +      L P E S  ++D ++                +L +++ + + +     E
Sbjct: 910 AMRPDDIETEVLVPEEASSSLQDNFVPRVKFRLINCFDLNLEALLQQQSVFEQLILSCEE 969

Query: 721 IPKWFRHQSMGSSATL 736
           +P +F H++ G+S +L
Sbjct: 970 VPSYFTHKATGASTSL 985


>gi|298953303|gb|ADI99936.1| TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 991

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 273/857 (31%), Positives = 411/857 (47%), Gaps = 121/857 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFTSHLH  L  K I  FIDD +L RG+ I  SLL  IE S I+I+
Sbjct: 16  FDVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIV 75

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I SE YASS W                       FY+VDPSHVR+Q   FG  F++L+ R
Sbjct: 76  IISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVDPSHVRRQRGVFGEEFAKLQVR 135

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK---NKGLVG 155
           F  KM+ W  ALT  + +SG+D      E+ LI+ I  +V K+L  +  ++    K  VG
Sbjct: 136 FSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLKNSATTELDVAKYPVG 195

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +  +  L  + S  +  + ++GIGG+ K T+A A++NKIS  FEG  F  NVREA 
Sbjct: 196 IDIQVSNL--LPHVMSNEITMVGLYGIGGMGKTTLAKALYNKISDDFEGCCFLANVREAS 253

Query: 215 EETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------- 261
            +  G+ +LQK L+ E+  D +++       I    +RL  KK+ ++ DD+ +       
Sbjct: 254 NQYRGLVELQKTLIREILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDIDTHEQLQAL 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VI TTR+KQ+L +   N   R+  L   +  +LF   AF   H  + +
Sbjct: 314 AGGHDWFGHGSKVIATTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFKNSHPSSDY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLE-IIPHVEIEEVLKISYDS 370
           ++++ +A+ Y +G+PLAL+VLG +L     +  +E  + + E       I+++L+ISYD 
Sbjct: 374 LDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYENSYLDKGIQDILRISYDE 433

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRM 415
           L+   K +FL I+C    E ++EV  +                    SL+ +D F R+ M
Sbjct: 434 LEQDVKEIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEM 493

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++ MG  I   E+ N   KR RL   KD+  VL  +    A++ I L+ ++   E+ 
Sbjct: 494 HDLIQQMGHTIHLLETSN-SHKRKRLLFEKDVMDVLNGDMEARAVKVIKLNFHQPT-ELD 551

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           ++S  F K+  L  L+ +   N      LE +P + +R + WP+ P  +L      EKL 
Sbjct: 552 IDSRGFEKVKNLVVLKVH---NVTSSKSLEYLP-SSLRWMIWPKFPFSSLPSTYSLEKLT 607

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KG 590
            L MP + ++   +         C +   I       K LE + D     NLE L + + 
Sbjct: 608 ELSMPSSFIKHFGNGYLN-----CKWLKRINLNY--SKFLEEISDLSSAINLEELNLSEC 660

Query: 591 TTIRELPESLGRLSWVKRLILSNN--------SNLE------------RIPESIRHLSK- 629
             +  + ES+G L  + +L LS++        SNL+            RI ES  H S+ 
Sbjct: 661 KKLVRVHESVGSLGKLAKLELSSHPNGFTQFPSNLKLKSLQKLVMYECRIVESYPHFSEE 720

Query: 630 ----LTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKLPAGLSSMSSVLYVNL--C 681
               L  L I  C   +  P +    GL  L    C  L  LP  L     V+Y+N   C
Sbjct: 721 MKSSLKELRIQSCSVTKLSPTIGNLTGLQHLWIDVCKELTTLPKILKVPEGVIYMNAQGC 780

Query: 682 NFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPP 741
             L   P+ ++E +       S Y +   K+ +     +IP+WF  +S  +S T  T   
Sbjct: 781 RSLARFPDNIAEFIS----CDSEYVDGKYKQLILMNNCDIPEWFHFKSTNNSITFPTTFN 836

Query: 742 RPAGYNKLISFAFCAVV 758
            P    KL   A C  V
Sbjct: 837 YPGW--KLKVLAACVKV 851


>gi|357468517|ref|XP_003604543.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505598|gb|AES86740.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1131

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 277/880 (31%), Positives = 431/880 (48%), Gaps = 144/880 (16%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           DVF+SFRGED R  F  HL      K I  F+D++L RGD++S SL+  IE S I++   
Sbjct: 112 DVFVSFRGEDIRHGFFGHLVIAFPRKQINAFVDEKLKRGDDMSHSLVEAIEGSPISLC-- 169

Query: 63  SERYASSRW-FFYRVDPSHVRKQSHSFGRHFSRLRKRF-PEKMKRWKNALTEAADLSGFD 120
            E+Y       FY VDP++VR Q  S+   F+ L KR    K++ W++AL  +A+LSG  
Sbjct: 170 KEKYGQIVIPVFYGVDPTNVRHQKKSYENAFAELEKRCNSSKVQIWRHALNTSANLSGIK 229

Query: 121 SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIW 180
           S+  R +++L+EEI N +LKRL +     +KGL+G++ SI  + SLL   SE V  + IW
Sbjct: 230 SSDFRNDAELLEEIINLLLKRL-SKHPVNSKGLIGIDKSIAHLNSLLQKESEKVSVIGIW 288

Query: 181 GIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL-SKDGNMRN 239
           G+G I K TIAG +FN+    +EG  F   V E     G   L++KL S L ++D  +R+
Sbjct: 289 GMGSIGKTTIAGEIFNQNCSEYEGCCFLEKVSEQLGRHGRTFLKEKLFSTLLAEDVKIRS 348

Query: 240 IESQLN----RLARKKVRIVFDDVT----------------SGSRVIITTRDKQVL--KN 277
                N    R+ R KV IV DDV                 S SR+I+TTRDKQVL    
Sbjct: 349 PNGLSNYTVRRIGRMKVLIVLDDVKEEGQLEMLFRTLDWFRSDSRIILTTRDKQVLIANE 408

Query: 278 CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYL 337
              +  Y++  L  ++A +LF   AF   HL+  + +L+ K + YA+G+PL L+VL   L
Sbjct: 409 VEDDDLYQVGVLDSSEALELFNLNAFKQSHLEMEYYDLSKKVVDYAKGIPLVLEVLAHLL 468

Query: 338 CGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG-----EHRD 392
            G+ KE WES + KL+ +P+ +I++V+++SYD LD  ++  FLDIACF  G     +   
Sbjct: 469 RGKDKEEWESQLDKLKRLPNKKIQDVMRLSYDDLDRLEQKYFLDIACFFNGLRLKVDCMK 528

Query: 393 EVISIFDASKSL-INLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
            ++  F++  ++ I L+   R++   L+      ++   SI  P K ++LW    IY VL
Sbjct: 529 LLLKDFESDNAVAIGLE---RLKDKALITISEDNVI---SIEDPIKCSQLWDPDIIYDVL 582

Query: 452 KKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY-GDKNKCMVSHLEGVPF- 509
           K + GT+ I  I +D++ + R++ ++ + F+KM  L FL F+ G+  +C+     G+   
Sbjct: 583 KNDKGTDVIRSIRVDLSAI-RKLKLSPHVFAKMTNLLFLDFHGGNYQECLDLFPRGIQSF 641

Query: 510 -AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFE 566
             ++R++ W   PLK+L     AE LV   +  ++VE+LW  V+ L +          F 
Sbjct: 642 PTDLRYISWMSYPLKSLPKKFSAENLVIFDLSFSQVEKLWYGVKDLVNLQ-------EFR 694

Query: 567 IIDCKMLERLPD--------------------------------ELE------NLEYL-- 586
           + D + L+ LPD                                EL+      NL +L  
Sbjct: 695 LFDSRSLKELPDLSKATNLKVLNITQAPLLKNVDPSVLSLDNLVELDLTCCDNNLSFLFY 754

Query: 587 ----------TVKGTTIRELPESLGRLSWVKRLILSNNSN------------LERIPESI 624
                     T       + P      SW+  L LS  S             +ERIP SI
Sbjct: 755 HQLKKFKKLRTFSEIAYNKFPGQDLTKSWINELPLSFGSQSTLETLIFKGCRIERIPPSI 814

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK----LPAGLSSMSSVLYVNL 680
           ++ ++L ++ ++ C +L+T+PELP +L  L A  C SL+     L A      +   V L
Sbjct: 815 KNRTRLRYINLTFCIKLRTIPELPSSLETLLAE-CESLKTVWFPLTASEQFKENKKRVLL 873

Query: 681 CNFLKLDPNELSEI---VKDGWMK----------HSLYEER-------GIKKSMY-FPGN 719
            N L LD   L  I   ++   MK          H+  E         G  ++ Y +PG+
Sbjct: 874 WNCLNLDKRSLINIELNIQINIMKFAYQHLSTLEHNYVESNVDYKQTFGSYQAFYVYPGS 933

Query: 720 EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            +P+W  +++      +   P        L+ F FC ++ 
Sbjct: 934 TVPEWLAYKTTQDDMIVDLFPNHLP---PLLGFVFCFILA 970


>gi|357499675|ref|XP_003620126.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495141|gb|AES76344.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1013

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 248/749 (33%), Positives = 391/749 (52%), Gaps = 85/749 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF G DTR  FT +L+  L+ K I+TFIDD +L RGD I+ SL+  I+ S IAI 
Sbjct: 14  YDVFLSFTGADTRFGFTGNLYKALTDKKIRTFIDDKELQRGDEITPSLVKAIQESRIAIP 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS  YASS +                      FY VDPSHVR Q+ S+G+  + L +RF
Sbjct: 74  IFSTNYASSSFCLDELVHIVECVKRKGRLVLPIFYDVDPSHVRHQTGSYGKGMTDLEERF 133

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK+++WK AL + A+L+G+   +    E + I +I  +V  + +          VG
Sbjct: 134 KNNKEKLQKWKMALNQVANLAGYHFKLGNEYEYEFIVKIVKEVSNKTERVPLHVADYPVG 193

Query: 156 VECSIEEIESLLCIG--SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           +E  + +++S L      + V  + I+GIGG+ K T+A A++N I   FE   F  ++RE
Sbjct: 194 IEYRLLKVKSYLLDTKFDDRVQMVGIYGIGGLGKTTLARAIYNMIGDKFECLCFLHDLRE 253

Query: 214 AEETGGIKDLQKKLLSE-LSKDGNMRNIESQL----NRLARKKVRIVFDDVTS------- 261
           +    G++ LQ+KLLS+ +  D  + ++   +     RL RKKV ++ DDV +       
Sbjct: 254 SSAKHGLEHLQQKLLSKTVELDTKLGDVNEGIPIIKQRLGRKKVLLILDDVDNMRQLQVM 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS VIITTRD+ +L +   ++KY++  L   ++ +LF   AF     D+ +
Sbjct: 314 AGGLDWFGPGSIVIITTRDQHLLTSHGIHRKYQVDALNRIESLELFRWKAFKDSIGDSRY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            ++ D+AI YA G+PL L+++G  L G++ E W+S + + E IP+ EI+ +LKIS+D+L+
Sbjct: 374 DDILDRAIAYASGLPLVLELVGPALFGKNIEEWKSILDRYERIPNKEIQNILKISFDALE 433

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDASKS-----------------LINLDLFYRIRM 415
           + ++ VFLDIAC  +G    EV  I  A                    +I+L     + +
Sbjct: 434 EDEQGVFLDIACCFKGYDLGEVKDILCAHHGQSIEYHIGVLVEKTLIQIIHLGTDAVVTL 493

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD---MNKVNR 472
           HDL+ DMG+EIVR+ES   PGKR+RLW ++DI QVL++N+GT  IE I L      +   
Sbjct: 494 HDLIEDMGKEIVRQESPKEPGKRSRLWFYEDIVQVLEENSGTSQIEIIYLKFPLFEEEEE 553

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
                 +   ++ K++ L+    +N       E +P   +R LEWP  P + L  + C +
Sbjct: 554 MEEEVEWKGDELKKMKNLKTLIIENGRFSRAPEQLP-NSLRVLEWPGYPSQYLPHDFCPK 612

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCT-FKTPITFEIIDCKMLERLPD--ELENL-EYL 586
           KL   K+P             L SSL   F       + + + L ++ D   L+NL E+ 
Sbjct: 613 KLSICKLPGNGFTSF-----ELSSSLKKRFVHLKKLNLDNSECLTQILDVSGLKNLVEFS 667

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
             K   +  + +S+G L+ +K L     SNL+  P     L+ L  L +S+C  L+  PE
Sbjct: 668 FRKCENLVTIHDSIGFLNKLKILDAYGCSNLKSFPP--LKLTSLEALGLSYCNSLERFPE 725

Query: 647 LPCNLGLLSARNC--TSLEKLPAGLSSMS 673
           +   +  ++   C  TS+++LP    +++
Sbjct: 726 ILGKMENITDMFCVGTSIKELPFSFQNLT 754


>gi|449443196|ref|XP_004139366.1| PREDICTED: LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1,
           CONSTITUTIVE 1-like [Cucumis sativus]
          Length = 1253

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 244/747 (32%), Positives = 394/747 (52%), Gaps = 102/747 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG+DTR NFT HL   L  K +  FIDD L RG+ IS++L   I+ + I+I+I
Sbjct: 22  FDVFLSFRGDDTRSNFTGHLDMALRQKGVNVFIDDMLKRGEQISETLSKAIQEALISIVI 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY+VDPS VRKQ+  FG   ++ +  F 
Sbjct: 82  FSQNYASSSWCLDELVKIVECKKSKGQLVLPIFYKVDPSDVRKQTGCFGEALAKHQANFM 141

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVGVEC 158
           EK + W++ALT  A+ SG+D    R E+  I+++  +VL RL+         K  VG++ 
Sbjct: 142 EKTQIWRDALTTVANFSGWDLGT-RKEADFIQDLVKEVLSRLNCANGQLYVAKYPVGIDS 200

Query: 159 SIEEIESL---LCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
            +E+++ L   +    +GV  + I+GIGGI K T+A A++NKI+  FEG  F  NVRE +
Sbjct: 201 QLEDMKLLSHQIRDAFDGVYMMGIYGIGGIGKTTLAKALYNKIANQFEGFCFLSNVRETS 260

Query: 215 EETGGIKDLQKKLLSELSK-DGNMRNIESQLNRLARKKVRIVFDDVTS------------ 261
           ++  G+  LQ+KLL E+ K D  + N++          V IV DDV              
Sbjct: 261 KQFNGLVQLQEKLLYEILKFDLKIGNLDX---------VLIVLDDVDKLKQLEALVGERD 311

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GS++I+TTR+  +L +   ++KY ++EL +  + +LF   AF   H  +++++L+ 
Sbjct: 312 WFGHGSKIIVTTRNSHLLSSHEFDEKYGVRELSHGHSLELFSWHAFKKSHPSSNYLDLSK 371

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           +A  Y +G PLAL VLG +LC R +  W + + + E     +IE +++IS+D L++  K 
Sbjct: 372 RATNYCKGHPLALVVLGSFLCTRDQIKWRTILDEFENSLSEDIEHIIQISFDGLEEKIKE 431

Query: 378 VFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGK 437
           +FLDI+C   GE  + V S+ +  +                   MG++IV  ES   PGK
Sbjct: 432 IFLDISCLFVGEKVNYVKSVLNTCQ-------------------MGQKIVNGESF-EPGK 471

Query: 438 RNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN 497
           R+RLW   D+ +V   N+GT A++ I LD++   R + ++S AF  M  LR L     +N
Sbjct: 472 RSRLWLVHDVLKVFADNSGTIAVKAIKLDLSNPTR-LDVDSRAFRNMKNLRLLIV---RN 527

Query: 498 KCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPCTKVEQLWDDVQRLPSS 555
               +++E +P   ++ ++W     +   L+   + LV L +  + +  L          
Sbjct: 528 ARFSTNVEYLP-DNLKWIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKG------- 579

Query: 556 LCTFKTPITFEIID---CKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRL 609
              FK  I    +D     +LE++PD     NLE L +   T +R +P+S+  L  +  L
Sbjct: 580 ---FKVIIYLPHVDLSYSSLLEKIPDFPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTL 636

Query: 610 ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPA 667
            L + SNL ++P S   L  L  L +++C++L+ LP+     NL  L  + CT+L  +  
Sbjct: 637 DLDHCSNLIKLP-SYLMLKSLKVLKLAYCKKLEKLPDFSTASNLEKLYLKECTNLRMIHD 695

Query: 668 GLSSMSSVLYVNL--CNFLKLDPNELS 692
            + S+S ++ ++L  C+ L+  P+ L+
Sbjct: 696 SIGSLSKLVTLDLGKCSNLEKLPSYLT 722



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 46/285 (16%)

Query: 463 ISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVP----FAEVRHLEWP 518
           ++LD+ K +           K+P    L+     N      LE +P       ++ L   
Sbjct: 704 VTLDLGKCSN--------LEKLPSYLTLKSLEYLNLAHCKKLEEIPDFSSALNLKSLYLE 755

Query: 519 QCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
           QC    L +  E + SL    T   +   ++++LPS L   K+   FE+  C  LE  P 
Sbjct: 756 QCT--NLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYL-KLKSLRHFELSGCHKLEMFPK 812

Query: 579 ELENLEYLT---VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
             EN++ L    +  T IRELP S+G L+ +  L L   +NL  +P +I  L  L  L +
Sbjct: 813 IAENMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQL 872

Query: 636 SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS-MSSVLYVNLCNFLKLDPNELSEI 694
            +C+ LQ +P LP  +  + A  CT L + P  +   +SS   V L +F           
Sbjct: 873 RNCKFLQEIPNLPHCIQKMDATGCTLLGRSPDNIMDIISSKQDVALGDF----------- 921

Query: 695 VKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTR 739
                            +        IP+WF +QS+ +S  +  R
Sbjct: 922 ----------------TREFILMNTGIPEWFSYQSISNSIRVSFR 950


>gi|27764545|gb|AAO23075.1| R 5 protein [Glycine max]
          Length = 907

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 254/716 (35%), Positives = 378/716 (52%), Gaps = 83/716 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGEDTR  FT +L+  L  K I TF D D+L  G+ I+ +LL  I+ S IAI
Sbjct: 11  IYDVFLSFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGEEITPALLKAIQDSRIAI 70

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            + SE +ASS +                      FY+V P  VR Q  ++G   ++ +KR
Sbjct: 71  TVLSEDFASSSFCLDELATILFCAQYNGMMVIPVFYKVYPCDVRHQKGTYGEALAKHKKR 130

Query: 99  FPEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           FP+K+++W+ AL + A+LSG    +    E K I  I   V ++++          VG+E
Sbjct: 131 FPDKLQKWERALRQVANLSGLHFKDRDEYEYKFIGRIVASVSEKINPASLHVADLPVGLE 190

Query: 158 CSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNK--ISRHFEGSYFALNVREA 214
             ++E+  LL +G+ +GVC + I G+GGI K T+A AV+N   I+ +F+G  F  NVRE+
Sbjct: 191 SKVQEVRKLLDVGNHDGVCMIGIHGMGGIGKSTLARAVYNDLIITENFDGLCFLENVRES 250

Query: 215 EETGGIKDLQKKLLSE-LSKDGNMRNIESQLNR----LARKKVRIVFDDVTS-------- 261
               G++ LQ  LLSE L +D  +R+ +  +++    L  KKV ++ DDV          
Sbjct: 251 SNNHGLQHLQSILLSEILGEDIKVRSKQQGISKIQSMLKGKKVLLILDDVDKPQQLQTIA 310

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS +IITTRDKQ+L      K+Y ++ L    A +L    AF  + +D S+ 
Sbjct: 311 GRRDWFGPGSIIIITTRDKQLLAPHGVKKRYEVEVLNQNAALQLLTWNAFKREKIDPSYE 370

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           ++ ++ + YA G+PLAL+V+G  + G+    W+SA+   + IP+ EI E+LK+S+D+L +
Sbjct: 371 DVLNRVVTYASGLPLALEVIGSNMFGKRVAEWKSAVEHYKRIPNDEILEILKVSFDALGE 430

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLL 419
            QKNVFLDIAC  +G    EV  +                  KSLI +     + MHDL+
Sbjct: 431 EQKNVFLDIACCFKGCKLTEVEHMLRGLYNNCMKHHIDVLVDKSLIKVR-HGTVNMHDLI 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--IHMN 477
           + +GREI R+ S   PGK  RLW  KDI QVLK NTGT  IE I LD +  ++E  +  N
Sbjct: 490 QVVGREIERQISPEEPGKCKRLWLPKDIIQVLKHNTGTSKIEIICLDFSISDKEQTVEWN 549

Query: 478 SYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
             AF KM  L+ L     K +K      EG     +R LEW + P K L  N     L+ 
Sbjct: 550 QNAFMKMENLKILIIRNGKFSKGPNYFPEG-----LRVLEWHRYPSKCLPSNFHPNNLLI 604

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT- 591
            K+P + +       +   SS     T + F+  +CK L ++PD  +L NL  L+ KG  
Sbjct: 605 CKLPDSSMASF----EFHGSSKFGHLTVLKFD--NCKFLTQIPDVSDLPNLRELSFKGCE 658

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           ++  + +S+G L+ +K+L       L   P    +L+ L  L +S C  L+  PE+
Sbjct: 659 SLVAVDDSIGFLNKLKKLNAYGCRKLTSFPP--LNLTSLETLQLSGCSSLEYFPEI 712


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 259/820 (31%), Positives = 400/820 (48%), Gaps = 133/820 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTRD+FT HL+  L+ + I+ F+D   +I+GD I+ +L+  I+ S  +II
Sbjct: 18  WDVFLSFRGEDTRDSFTKHLYDSLNKQEIRVFLDASGMIQGDEIAPTLMEAIQDSASSII 77

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF-PEK 102
           I S RYA+S W                  FY+VDPS+VR+Q   F + F    KRF  +K
Sbjct: 78  ILSPRYANSHWCLEELARICELRRLILPVFYQVDPSNVRRQKGPFEQDFESHSKRFGDDK 137

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           + +W+ A+ +   +SGF  +    E  LI  + N VL+ L  T        VG++  +E+
Sbjct: 138 VVKWRAAMNKVGGISGFVFDT-SGEDHLIRRLVNRVLQELRKTPVGIATYTVGLDSRLEK 196

Query: 163 IESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGI 220
           ++       S  V  L ++G+GGI K T+A A+FNK+  HFE   F  N+++ ++E GG+
Sbjct: 197 LKMRFTDDKSNRVQVLGLYGMGGIGKTTLATALFNKLVGHFESRCFISNIKDISQEDGGL 256

Query: 221 KDLQKKLLSELSKDGNMRN--------------------------IESQLNRLARKKVRI 254
             LQ KLL +L  D    N                            +QLN LA K+   
Sbjct: 257 VTLQNKLLGDLFPDRPPVNDINDGIAVIKELCHEKRVLVVLDDVDDVNQLNVLAGKR--- 313

Query: 255 VFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
             D    GSRVI+TTR++ VL     N+ Y ++EL  ++A KLF   A   D+    ++ 
Sbjct: 314 --DWFGEGSRVIVTTRNRDVLVEHLVNEFYEVRELGSSEALKLFSYHALRRDNPTEEYLN 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           ++ + +    G+PLAL+V G  L   R  + WE  ++KL  I    +++VL+IS+D LDD
Sbjct: 372 ISKEIVSLTGGLPLALEVFGSTLFNERGIKKWEDVLKKLREIRPGNLQDVLRISFDGLDD 431

Query: 374 SQKNVFLDIAC-FLEGE-HRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
            +K VFLDIAC F++    R+E I I +               K LI +   Y + MHD 
Sbjct: 432 EEKCVFLDIACLFIKMRMKREEAIDILNGCGFRAETAITVLTVKCLIKIGGDYELWMHDQ 491

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR------ 472
           LRDMGR+IVR E++  PG R+RLW   DI  +LK   GT  ++G+ LD  K N       
Sbjct: 492 LRDMGRQIVRDENLLDPGMRSRLWDRGDIMTMLKHKKGTRHVQGLILDFEKKNYVRTQKI 551

Query: 473 ------------------------------EIHMNSYAFSKMPKLRFLRFYGDKNKCMVS 502
                                         E+ +++ A   +  LR L+    K K    
Sbjct: 552 SWVKALNPSSSLDYLIEKCKLFLQLRAEEGELILDTEALKSLVNLRLLQINHAKVK---G 608

Query: 503 HLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD-DVQRLPSSLCTF 559
             +  P A ++ L+W  CPLK L  +    +L  L +  + ++++W     ++  +L   
Sbjct: 609 KFKSFP-ASLKWLQWKNCPLKKLPSDYAPHELAVLDLSESGIQRVWGWTRNKVAENL--- 664

Query: 560 KTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSN 616
              +   +  C  LE  PD    + LE L  KG   + ++ ESLG +  + +L L    N
Sbjct: 665 ---MVMNLRRCYNLEASPDLSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCIN 721

Query: 617 LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR-----NCTSLEKLPAGLSS 671
           L   P  +  L  L  L +S C +L+   ELP ++G +++      + T++  LP  L  
Sbjct: 722 LVEFPRDVSGLRLLQNLILSSCLKLE---ELPQDIGSMNSLKELVVDETAISMLPQSLYR 778

Query: 672 MSSV--LYVNLCNFLKLDPNELSEIV--KDGWMKHSLYEE 707
           ++ +  L +N C F+K  P  L  ++  K+  + HS  EE
Sbjct: 779 LTKLEKLSLNDCKFIKRLPERLGNLISLKELSLNHSAVEE 818



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 19/155 (12%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRELPESLGRLSW 605
           +  LP SL          + DCK ++RLP+ L NL   + L++  + + ELP+S+G LS 
Sbjct: 769 ISMLPQSLYRLTKLEKLSLNDCKFIKRLPERLGNLISLKELSLNHSAVEELPDSIGSLSN 828

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS------ARNC 659
           +++L L    +L  IPESIR+L  L  + I+       + ELP  +G L       A  C
Sbjct: 829 LEKLSLMRCQSLTTIPESIRNLQSLMEVSITS----SAIKELPAAIGSLPYLKTLFAGGC 884

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
             L KLP  +  ++S+      + L+LD   +SE+
Sbjct: 885 HFLSKLPDSIGGLASI------SELELDGTSISEL 913



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 37/179 (20%)

Query: 570 CKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSWVKRLILS-------------- 612
           C  LE LP +   + +L+ L V  T I  LP+SL RL+ +++L L+              
Sbjct: 743 CLKLEELPQDIGSMNSLKELVVDETAISMLPQSLYRLTKLEKLSLNDCKFIKRLPERLGN 802

Query: 613 ---------NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS-- 661
                    N+S +E +P+SI  LS L  L +  C+ L T+PE   NL  L   + TS  
Sbjct: 803 LISLKELSLNHSAVEELPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSITSSA 862

Query: 662 LEKLPAGLSSMS--SVLYVNLCNFLKLDPN------ELSEIVKDGWMKHSLYEE-RGIK 711
           +++LPA + S+     L+   C+FL   P+       +SE+  DG     L E+ RG+K
Sbjct: 863 IKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSISELPEQIRGLK 921



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 13/139 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+++ +     T     C  L +LPD    L ++  L + GT+I ELPE +  L  
Sbjct: 863 IKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSISELPEQIRGLKM 922

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP------CNLGLLSARNC 659
           +++L L   ++L  +PE+I ++  LT + +  C     + ELP       NL +L+   C
Sbjct: 923 IEKLYLRKCTSLRELPEAIGNILNLTTINLFGC----NITELPESFGRLENLVMLNLDEC 978

Query: 660 TSLEKLPAGLSSMSSVLYV 678
             L KLP  + ++ S+ ++
Sbjct: 979 KRLHKLPVSIGNLKSLCHL 997



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 86/396 (21%), Positives = 148/396 (37%), Gaps = 108/396 (27%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLGRLS 604
            ++  LP S    +  +   + +CK L +LP  + NL+   +L ++ T +  LPE+ G LS
Sbjct: 956  NITELPESFGRLENLVMLNLDECKRLHKLPVSIGNLKSLCHLLMEKTAVTVLPENFGNLS 1015

Query: 605  WV-----------------KRLILSNN----SNLE-----------RIPESIRHLSKLTF 632
             +                 + ++L N+    S LE           ++P+    LS L  
Sbjct: 1016 SLMILKMQKDPLEYLRTQEQLVVLPNSFSKLSLLEELNARAWRISGKLPDDFEKLSSLDI 1075

Query: 633  LFISH-----------------------CERLQTLPELPCNLGLLSARNCTSLEKLPAGL 669
            L + H                       CE L++LP LP +L  L   NC  LE + + +
Sbjct: 1076 LDLGHNNFSSLPSSLCGLSLLRKLLLPHCEELKSLPPLPPSLEELDVSNCFGLETI-SDV 1134

Query: 670  SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH------------SLYEERGIKK----- 712
            S +  +  +N+ N  K     + +I   G +K             SL  +R + K     
Sbjct: 1135 SGLERLTLLNITNCEK-----VVDIPGIGCLKFLKRLYMSSCKACSLTVKRRLSKVCLRN 1189

Query: 713  --SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-----FPAFLK 765
              ++  PG++ P WF  +++   +  K         N+ I     +VVV      P  L+
Sbjct: 1190 IRNLSMPGSKFPDWFSQENVVHFSEQK---------NRAIKAVIVSVVVSLDREIPEDLR 1240

Query: 766  YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGP 825
            Y            ++ A+  D  +    +  + +L  I  +  D + +   S        
Sbjct: 1241 Y-------SPLVPDIQAIVLD--QNIPIYSTTLYLRGIPKINEDQIHICRYSNIQPLVSM 1291

Query: 826  NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
              D    +I      PP +E  E+KK GI  VY  D
Sbjct: 1292 LKD--GCKIQVRKRNPPVIEGIELKKSGILLVYEDD 1325



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK---GTTIRELPESLGRLSW 605
            +  LP  +   K      +  C  L  LP+ + N+  LT     G  I ELPES GRL  
Sbjct: 910  ISELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGCNITELPESFGRLEN 969

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L L     L ++P SI +L  L  L +        +  LP N G LS+     ++K 
Sbjct: 970  LVMLNLDECKRLHKLPVSIGNLKSLCHLLMEKT----AVTVLPENFGNLSSLMILKMQKD 1025

Query: 666  P 666
            P
Sbjct: 1026 P 1026


>gi|351724311|ref|NP_001237821.1| candidate disease-resistance protein [Glycine max]
 gi|223452609|gb|ACM89631.1| candidate disease-resistance protein [Glycine max]
          Length = 577

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 208/548 (37%), Positives = 303/548 (55%), Gaps = 65/548 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL++ L  K I TFIDD+ L RG+ I+ +L+  IE S +AI 
Sbjct: 14  YDVFLSFRGEDTRSAFTGHLYNTLQSKGIHTFIDDEKLQRGEQITPALMKAIEDSRVAIT 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS +                      FY+VDPS VR Q  S+G   ++L +RF
Sbjct: 74  VLSEHYASSSFCLDELATILHCDQRKRLLVIPVFYKVDPSDVRHQKGSYGEALAKLERRF 133

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
              PEK++ WK AL   ADLSG+        E K IE+I  +V + ++          VG
Sbjct: 134 QHDPEKLQNWKMALQRVADLSGYHFKEGEGYEYKFIEKIVEEVSRVINLCPLHVADYPVG 193

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNK--ISRHFEGSYFALNVR 212
           ++  +  +  LL  GS+ GV  + I G+GG+ K T+A AV+N+  I+  F+G  F  NVR
Sbjct: 194 LKSRVLHVRRLLHAGSDHGVHMIGIHGMGGVGKSTLARAVYNELIIAEKFDGLCFLANVR 253

Query: 213 EAEETGGIKDLQKKLLSEL------SKDGNMRNIESQLNRLARKKVRIVFDDVTS----- 261
           E     G++ LQ KLL E+      S     + I    +RL  KKV ++ DDV +     
Sbjct: 254 ENSNKHGLEHLQGKLLLEILGEKSISLTSKQQGISIIQSRLKGKKVLLIIDDVDTHDQLQ 313

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS++IITTRDKQ+L +   NK Y MKEL    A +L    AF  +  D 
Sbjct: 314 AIAGRPDWFGRGSKIIITTRDKQLLASHEVNKTYEMKELDENHALQLLTWQAFKKEKADP 373

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           +++E+  + + YA G+PLAL+V+G +L G+S + WESA+++ + I   EI ++LK+S+D+
Sbjct: 374 TYVEVLHRVVTYASGLPLALEVIGSHLVGKSIQEWESAIKQYKRIAKKEILDILKVSFDA 433

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD----------ASKSLINLDLF-YRIRMHDLL 419
           L++ +K VFLDIAC  +G    E+  ++D            KSLI +  +   + MHDL+
Sbjct: 434 LEEEEKKVFLDIACCFKGWKLTELEHVYDDCMKNHIGVLVEKSLIEVRWWDDAVNMHDLI 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +DMGR I ++ES   P KR RLW  KDI QVL++N+    + G   DM+  +  +     
Sbjct: 494 QDMGRRIDQQESSKEPRKRRRLWLTKDIIQVLEENSAMRRVGG---DMSACSSRLSRGGC 550

Query: 480 AFSKMPKL 487
              K+P++
Sbjct: 551 ILEKIPEI 558


>gi|27764537|gb|AAO23067.1| R 12 protein [Glycine max]
          Length = 893

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 255/733 (34%), Positives = 376/733 (51%), Gaps = 84/733 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSF  EDT   FT +L+  L+ + I TF  DQ L R   ++  L   I AS +AI
Sbjct: 11  IYDVFLSFIREDTHRGFTFYLYKALNDRGIYTFFYDQELPRETEVTPGLYKAILASRVAI 70

Query: 60  IIFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF-PE 101
           I+ SE YA S +                  F+ VDPS VR Q  S+G   ++ +KRF  +
Sbjct: 71  IVLSENYAFSSFCLDELVTILHCEREVIPVFHNVDPSDVRHQKGSYGEAMAKHQKRFKAK 130

Query: 102 KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           K+++W+ AL + A+L G+   +    E  LI  I   V +             VG+E  +
Sbjct: 131 KLQKWRMALKQVANLCGYHFKDGGSYEYMLIGRIVKQVSRMFGLASLHVADYPVGLESQV 190

Query: 161 EEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
            E+  LL +GS+ V  +  I G+GG+ K T+A AV+N I+ HF+ S F  NVRE     G
Sbjct: 191 TEVMKLLDVGSDDVVHIIGIHGMGGLGKTTLAMAVYNFIAPHFDESCFLQNVREESNKHG 250

Query: 220 IKDLQKKLLSEL--SKDGNMRNIESQLNRLA-----------------RKKVRIVF---D 257
           +K LQ  LLS+L   KD  + + +   + +                  R++++ +    D
Sbjct: 251 LKHLQSVLLSKLLGEKDITLTSWQEGASMIQHRLRLKKILLILDDVDKREQLKAIVGKPD 310

Query: 258 DVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVIITTRDK +LK     + Y +  L + DA +L    AF  + +D S+ ++ +
Sbjct: 311 WFGPGSRVIITTRDKHLLKYHEVERTYEVNVLNHDDAFQLLTWNAFKREKIDPSYKDVLN 370

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + YA G+PLAL+V+G  L G++   WESA+   + IP  EI ++L++S+D+L++ QKN
Sbjct: 371 RVVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEILKILEVSFDALEEEQKN 430

Query: 378 VFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR--IRMHDLLRD 421
           VFLDIAC  +G    EV  IF A               KSL+ L + +R  + MHDL++D
Sbjct: 431 VFLDIACCFKGYKWTEVYDIFRALYSNCKMHHIGVLVEKSLL-LKVSWRDNVEMHDLIQD 489

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--IHMNSY 479
           MGR+I R+ S   PGK  RLW  KDI QVLK NTGT  +E I LD +  ++E  +  N  
Sbjct: 490 MGRDIERQRSPEEPGKCKRLWSPKDIIQVLKHNTGTSKLEIICLDSSISDKEETVEWNEN 549

Query: 480 AFSKMPKLRFLRFYGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
           AF KM  L+ L     K +K      EG     +R LEW + P   L  N     LV  K
Sbjct: 550 AFMKMENLKILIIRNGKFSKGPNYFPEG-----LRVLEWHRYPSNCLPSNFDPINLVICK 604

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTI 593
           +P + +  L    +   SS     T + F+   CK L ++PD  +L NL  L+  G  ++
Sbjct: 605 LPDSSITSL----EFHGSSKLGHLTVLKFD--KCKFLTQIPDVSDLPNLRELSFVGCESL 658

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
             + +S+G L+ ++ L  +    L   P    +L+ L  L +SHC  L+  PE+   LG 
Sbjct: 659 VAIDDSIGFLNKLEILNAAGCRKLTSFPP--LNLTSLETLELSHCSSLEYFPEI---LGE 713

Query: 654 LSARNCTSLEKLP 666
           +       LE+LP
Sbjct: 714 MENITALHLERLP 726


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 252/772 (32%), Positives = 398/772 (51%), Gaps = 102/772 (13%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
            YDVF+SFRGEDTR++FT+ L   LS   I  F DD  L +G++I+  LL  I+ S + ++
Sbjct: 302  YDVFVSFRGEDTRNSFTAFLFDALSQNGIHAFKDDTHLQKGESIAPELLLAIQGSGLFVV 361

Query: 61   IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            +FS+ YASS W                       FY VDPS +RKQS  +G  F+   +R
Sbjct: 362  VFSKNYASSTWCLRELAHICNCTIQASPSRVLPIFYDVDPSELRKQSGYYGIAFAEHERR 421

Query: 99   FP------EKMKRWKNALTEAADLSGFDSNVIRPESK--LIEEIANDVLKRLDATFQSKN 150
            F       E+++RW+ AL + A++SG++   I+ ES+  +IE+I  ++  RL + FQ+  
Sbjct: 422  FRGDKEKMEELQRWREALKQVANISGWN---IQNESQPAVIEKIVLEIKCRLGSKFQNLP 478

Query: 151  KG-LVGVE-CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
            KG LVG+E C  E  + L       V  + I G+GGI K T+A A++ KIS  ++   F 
Sbjct: 479  KGNLVGMESCVEELEKCLELELVSDVRVVGICGMGGIGKTTLARALYEKISYQYDFHCFV 538

Query: 209  LNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVT-- 260
             +V+E  +  G   +QK+LLS+   D N+    +         RL  K+  IV D+V+  
Sbjct: 539  DDVKEIYKKIGSLGVQKQLLSQCVNDKNIEICNASKGTYLIGTRLRNKRGLIVLDNVSRV 598

Query: 261  -------------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQW 301
                                GSR+I+ +RD+ +L+    N  Y++K L   +A +LFC+ 
Sbjct: 599  EQLHMFTGSRETLLRECVGGGSRIIVISRDEHILRTHGVNHVYQVKPLNQDNAVQLFCKN 658

Query: 302  AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIE 361
            AF  D++ + +  LT   + +AQG PLA++V+G +L GR+   W+S + +L  I   +I 
Sbjct: 659  AFKCDYILSGYKMLTHDVLSHAQGHPLAIQVIGNFLQGRNVSQWKSTLVRLNEIKSEDIM 718

Query: 362  EVLKISYDSLDDSQKNVFLDIACFLEGEHRDE-----VISIFD-------------ASKS 403
            +VL+ISYD L++  K +FLDIACF   ++  +     V  I D               KS
Sbjct: 719  KVLRISYDDLEEKDKEIFLDIACFFSRDYSYKYSERYVKEILDFRGFNPEIGLPILVDKS 778

Query: 404  LINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGI 463
            LI +    +I MH LLRD+G+ IVR++S   P   +RLW  KD+Y+VL  N   + +E I
Sbjct: 779  LITIS-HGKIYMHRLLRDLGKCIVREKSPKEPRNWSRLWDWKDLYEVLSNNMKAKNLEAI 837

Query: 464  SL-DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL 522
             + D   +  E  M   A SKM  L+ L F   +      +L  V   ++ +L WP  P 
Sbjct: 838  VVEDKTWMFFETTMRVDALSKMKNLKLLMF--PEYTKFSGNLNYVSNNKLGYLIWPYYPF 895

Query: 523  KTLNICAE--KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL 580
              L  C +   L+ L +  + ++ LWD  Q +P         +    +    L +LPD  
Sbjct: 896  NFLPQCFQPHNLIELDLSRSNIQHLWDSTQPIPK--------LRRLNLSLSALVKLPDFA 947

Query: 581  E--NLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            E  NL  L ++G   +R++  S+G L+ ++ L L +  +L ++P+    L+ L  L +  
Sbjct: 948  EDLNLRQLNLEGCEQLRQIHPSIGHLTKLEVLNLKDCKSLVKLPDFAEDLN-LRELNLEG 1006

Query: 638  CERLQTL-PELP--CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
            CE+L+ + P +     L  L+ ++C SLE LP  +  +SS+ Y++L    KL
Sbjct: 1007 CEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSSLQYLSLFGCSKL 1058



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 29/278 (10%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P++      ++ L L  N N E +P S++ LSKL  L + HC+RL+ LPELP    L 
Sbjct: 1140 KIPDAFVNFQCLEELYLMGN-NFETLP-SLKELSKLLHLNLQHCKRLKYLPELPSRTDLF 1197

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM---KHSLYEERGIK 711
               N T+++    GL        +N+ N  +L   +        WM    H         
Sbjct: 1198 -WWNWTTVDDYEYGLG-------LNIFNCPELAERDRCPNNCFSWMMQIAHPDLLPLVPP 1249

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKT-RPPRPAGYNKLISFAFCAVVVFPAFLKYFRHK 770
             S   PG+EIP WF  Q +G    +   R      Y   I  A   + V    +   R  
Sbjct: 1250 ISSIIPGSEIPSWFEKQHLGMGNVINIGRSHFMQHYKNWIGLALSVIFV----VHKERRI 1305

Query: 771  SGEDDWDGNVYAVCC-----DWKRKSE---GHLYSWFLGKISYVESDHVFLGCNSFGGEY 822
               D    ++ ++ C       +RK E    ++   F   +   ESDH++L    F  + 
Sbjct: 1306 PPPDMEQPSILSITCGPSIPPQQRKKERPSPYIPVLFREDLVTDESDHLWLF--YFTLDL 1363

Query: 823  FGP-NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYA 859
            F   N+DE   +              EVKK G  +VYA
Sbjct: 1364 FDDRNFDELEVKCRSRDLLHDQDLVVEVKKYGYRWVYA 1401


>gi|358348505|ref|XP_003638286.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355504221|gb|AES85424.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1074

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 237/747 (31%), Positives = 375/747 (50%), Gaps = 109/747 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGEDTR NF +HL+  LS   I T+IDD++ +G ++   L   IE S I+I+
Sbjct: 13  VYDVFLSFRGEDTRRNFVAHLNAALSNAEINTYIDDRIQKGTDLEPELFRAIEDSRISIV 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE Y  S W                      FY V+PS +R Q+  FG+      KR 
Sbjct: 73  VFSENYVHSSWCLKELEQIMKCRVNCGQIVEPVFYHVEPSVLRHQAGDFGKALEETAKRS 132

Query: 100 P---EKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
               EKM      W+ ALTE A++SG+D+   + + +LI +I  D+ ++L     +  K 
Sbjct: 133 SSEGEKMNTVLSTWQIALTEVANISGWDTKNFKDDVELISQIVKDIKRKLKNRLLNITKF 192

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            VG++  +++I + +   S  VC + IWG+GG  K T A A +N+    F    F  N+R
Sbjct: 193 PVGLDTHVQQIIAFIKNQSSKVCLIGIWGMGGSGKTTTATAFYNQFHGKFVVHRFIENIR 252

Query: 213 EAEETGGIKD--LQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
           E  E  G  +  L+++LL +     NM+ IE    R  R+K  +V DDV+          
Sbjct: 253 EVCEKEGRGNIHLKQQLLLD-----NMKTIE---KRFMREKALVVLDDVSALEQVNALCG 304

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 +GS +I+T+RD ++LK    +  Y M E+   ++ +LF   AF          +
Sbjct: 305 KHKCFGTGSVLIVTSRDVRILKLLEVDHVYSMTEMDEYESLELFNLHAFRKSSAKEDFNQ 364

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD-D 373
           L+   I Y  G+PLAL+ +G YL  R+K+ W+S +  L  IP+ ++++ LKISYD LD D
Sbjct: 365 LSRSIIDYCGGLPLALEEIGSYLFDRTKQQWKSTLSNLRRIPNDKVQKKLKISYDGLDCD 424

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
           S++ +FLDI CF  G+ R  V  I D               +SL+ ++   ++ MH LLR
Sbjct: 425 SERGIFLDICCFFIGKKRAYVSEILDGCGLNADMGITILIERSLLKVEKNDKLGMHGLLR 484

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMGREIV K S    GKR+RLW  +D++ VL +N GT+ +EG+ L  ++    +  N+ +
Sbjct: 485 DMGREIVCKRSEEELGKRSRLWSDEDVHDVLNQNCGTKFVEGLVLK-SQSTENVSFNADS 543

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCT 540
           F KM  LR L                    ++ H++       T +   E L   ++  +
Sbjct: 544 FKKMNNLRLL--------------------QLDHVDL------TGDFYQENLAVFELKHS 577

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELP 597
            ++ +W++ + +       K  I   +   K L   PD  +L NLE L +K    + +L 
Sbjct: 578 NIKLVWNETKLMN------KLKI-LNLSHSKHLTSTPDFSKLPNLEKLIMKNCPNLSKLH 630

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLL 654
            S+G L  +  L L + ++L  +PE I  L  L  L  S C ++  L E      +L  L
Sbjct: 631 HSIGDLKNILLLNLKDCTSLASLPEVIYQLKSLKTLIFSGCSKIDKLEEDIVQMESLTTL 690

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLC 681
            A++ T ++++P  +  +  + Y++LC
Sbjct: 691 IAKD-TGVKEMPYSILGLKGIAYISLC 716


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 251/770 (32%), Positives = 390/770 (50%), Gaps = 99/770 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRG+D R NF SH+      K I  FID+++ RG++I   L+  I  S IAI++
Sbjct: 80  HHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRESKIAIVL 139

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS+W                      FY VDPSHV+K +  FG  F +  K R 
Sbjct: 140 LSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYEVDPSHVKKLTGEFGAVFQKTCKGRT 199

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-DATFQSKNKGLVGVEC 158
            E + RW+ A  E A ++G+DS     E+ +IEEIA ++ KRL +++  S  +GL+G++ 
Sbjct: 200 KENIMRWRQAFEEVATIAGYDSRNWENEAAMIEEIAIEISKRLINSSPFSGFEGLIGMKA 259

Query: 159 SIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            IE+++ LLC+ S    + + I G  GI K TIA  + N+IS  F+ S F +  + +   
Sbjct: 260 HIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVF-MKFKPSYTR 318

Query: 218 GGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
               D       L+++ L++L   +D  +  + +  N +  KKV IV D V         
Sbjct: 319 PICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLDGVDQLVQLLAM 378

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+D+Q+LK       Y +      +A ++FC  AFG D  D    
Sbjct: 379 PKAVCLGPGSRIIITTQDQQLLKAFQIKHIYNVDFPPDHEALQIFCIHAFGHDSPDDGFE 438

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L  K  + A  +PL L+V+G +  G SKE W+  + +L I    EI  +LK SYD LDD
Sbjct: 439 KLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKFSYDVLDD 498

Query: 374 SQKNVFLDIACFLEGEHRDEV---------------ISIFDASKSLINLDLFYRIRMHDL 418
             K++FL IACF   E  D                 + +    +SLI+ DL     MH+L
Sbjct: 499 EDKDLFLHIACFFNDEGIDHTFEDTLRHKFSNVQRGLQVL-VQRSLISEDLTQ--PMHNL 555

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L  +GREIVR +S+  PGKR  L   K+I +VL  +TG+E++ GI+ ++     E++++ 
Sbjct: 556 LVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELNISD 615

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICAEKLV 533
             F  M  L+F RF  D+N     HL +G+ +   ++R L W   P+ +L      + LV
Sbjct: 616 RVFEGMSNLQFFRF--DENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFNLKFLV 673

Query: 534 SLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLP 577
            + +  +++E+LW+ +Q L +                +L T    +   + DC  L  LP
Sbjct: 674 KIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIELP 733

Query: 578 DEL---ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
             +    N++ L ++G +++ +LP S+G L  + RL L   S+L  +P SI +L  L  L
Sbjct: 734 SSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRL 793

Query: 634 FISHCERLQTLPELPCNLGLLSA---RNCTSLEKLPAGLSSMSS--VLYV 678
            +  C  L  LP    NL  L A     C+SL +LP+ + ++ S  +LY+
Sbjct: 794 DLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYL 843



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 18/191 (9%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENL----EYLTVKGTTIRELPESLGRLSWVK 607
            LPSS+         ++  C  L  LP  + NL    E    + +++ ELP S+G L  ++
Sbjct: 1115 LPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQ 1174

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
             L LS  S+L  +P SI +L  L  L ++ C +L +LP+LP +L +L A +C SLE L  
Sbjct: 1175 ELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLAC 1234

Query: 668  GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
               +    +++   +  KL+      IV+     +++            PG E+P +F +
Sbjct: 1235 SFPNPQ--VWLKFIDCWKLNEKGRDIIVQTSTSNYTM-----------LPGREVPAFFTY 1281

Query: 728  Q-SMGSSATLK 737
            + + G S  +K
Sbjct: 1282 RATTGGSLAVK 1292



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEY--LTVKG-TTIRELPESLGRLSWVKR 608
            LP S+       T  +  C  L  LP  + NL    L + G +++ ELP S+G L  +K+
Sbjct: 1068 LPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKK 1127

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEKL 665
            L LS  S+L  +P SI +L  L  L++S C  L  LP       NL  L    C+SL +L
Sbjct: 1128 LDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVEL 1187

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            P+ +         NL N  KLD N+ +++V    +  SL
Sbjct: 1188 PSSIG--------NLINLKKLDLNKCTKLVSLPQLPDSL 1218



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENL----EYLTVKGTTIRELPESLGRLSWVK 607
            LP S+       T  + +C  L  LP  + NL    E    + +++ ELP S+G L  +K
Sbjct: 996  LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 1055

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKL 665
            +L LS  S+L  +P SI +L  L  L +S C  L  LP    NL L  L    C+SL +L
Sbjct: 1056 KLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVEL 1115

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
            P+ +         NL N  KLD +  S +V+
Sbjct: 1116 PSSIG--------NLINLKKLDLSGCSSLVE 1138



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 7/136 (5%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLSWVK 607
            LPSS+          + +C  L  LP     L NL+ L + G +++ ELP S+G L  +K
Sbjct: 948  LPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLK 1007

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEK 664
             L LS  S+L  +P SI +L  L  L++S C  L  LP       NL  L    C+SL +
Sbjct: 1008 TLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVE 1067

Query: 665  LPAGLSSMSSVLYVNL 680
            LP  + ++ ++  +NL
Sbjct: 1068 LPLSIGNLINLKTLNL 1083



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           +++ ELP S+G L  +K+L LS  S+L  +P SI +L  L  L++S C  L  LP    N
Sbjct: 871 SSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGN 930

Query: 651 LGLLSARN---CTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIV 695
           L  L   N   C+SL +LP+ + ++ ++  LY++ C+ L   P+ +  ++
Sbjct: 931 LINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLI 980



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 569  DCKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            +C  L  LP  + NL  L      + +++ ELP S+G L  ++ L LS  S+L  +P SI
Sbjct: 917  ECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI 976

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV--LYVN 679
             +L  L  L +S C  L  LP    NL  L   N   C+SL +LP+ + ++ ++  LY++
Sbjct: 977  GNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLS 1036

Query: 680  LCNFLKLDPNELSEIV 695
             C+ L   P+ +  ++
Sbjct: 1037 ECSSLVELPSSIGNLI 1052



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLSWVK 607
           LPSS+         +++ C  L  LP     L NLE     G +++ ELP S+G L  +K
Sbjct: 780 LPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLK 839

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEK 664
            L L   S+L  IP SI +L  L  L +S C  L  LP       NL  L    C+SL +
Sbjct: 840 ILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVE 899

Query: 665 LPAGLSSMSSV--LYVNLCNFLKLDPNELSEIV 695
           LP  + ++ ++  LY++ C+ L   P+ +  ++
Sbjct: 900 LPLSIGNLINLQELYLSECSSLVELPSSIGNLI 932


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 256/769 (33%), Positives = 400/769 (52%), Gaps = 109/769 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR  FT HL+  L    I TF DD QL  G  IS+ L   IE S I++I
Sbjct: 23  YEVFLSFRGFDTRKGFTDHLYKALIRNGIHTFRDDEQLKSGKPISKELFKAIEESKISVI 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHS-FGRHFSRLRKR 98
           I S  YA+S W                      FY V PS VR+Q+   F   F++  K 
Sbjct: 83  ILSTNYATSTWCLDELAKMVELANNESRSILPVFYNVTPSEVREQTGDHFQEAFAQHDKD 142

Query: 99  F---PEKMKRWKNALTEAADLS--GFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KG 152
           F   P K+ RWKN+LT  A+L   GFD    R E+ +IE+I   +   L  TF + + K 
Sbjct: 143 FEGEPGKVARWKNSLTAIAELEAEGFDLTNFRYETDMIEKIVERIFGILIKTFSNDDLKD 202

Query: 153 LVGVECSIEEIES--LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
            VG++  + EI+S   LC+GSE V  + I G+ GI K T+A A+  +I   F+   F   
Sbjct: 203 FVGMD-RVNEIKSKMSLCMGSEEVRVIGICGMPGIGKSTVAKALSQRIRSQFDAISFISK 261

Query: 211 VREAEETGGIKDLQKKLLSEL-SKDGNMRNIESQL-NRLARKKVRIVFDDVTS------- 261
           V E  +  G+  ++++L   L  K    ++++  +  RL  K+V I+ D+V         
Sbjct: 262 VGEISKKEGLFHIKEQLCDHLLDKKVTTKDVDDVICKRLRDKRVLIILDNVDELEQIEAV 321

Query: 262 --------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                         GSR+I+TT D+++L + +  + Y +++L    A  LFC+ A   DH
Sbjct: 322 AGSDGAGLSNRFGKGSRIIVTTTDERLLID-YNPEIYTIEKLTPDQALLLFCRKALKTDH 380

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV---EIEEVL 364
              +  +L+++ + Y  G PLAL+V G  L  R ++ W + ++ L+   +    +I  VL
Sbjct: 381 PTDAFKKLSNEFVDYIDGHPLALEVFGHSLWKREEDYWSTKLKSLKDKGYSGEKKIIGVL 440

Query: 365 KISYDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLF 410
           K S+D L++  Q+++FLD ACF +GE    +  IF++              KSL+++ + 
Sbjct: 441 KASFDGLENQEQQDMFLDTACFFKGEDVCRLEKIFESCGYYPGINITILCEKSLVSI-VG 499

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
            R+ MHDLL+ MGR +V  ES    G+R+RLWHH D   VLKKN GT+A++GI L + + 
Sbjct: 500 GRLWMHDLLQKMGRGLVLGES-KKEGERSRLWHHTDALPVLKKNKGTDAVQGIFLSLPQP 558

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           ++ +H+    FS M  LR L+ Y  +    + +L      E+  LEW +CPLK+L  +  
Sbjct: 559 DK-VHLKKDPFSNMDNLRLLKIYNVEFSGSLEYLSD----ELSLLEWHKCPLKSLPSSFE 613

Query: 529 AEKLVSLKM--------------PCTKVEQL-WDDVQRLPSSLCTFKTPITFEII--DCK 571
            +KLV L +              P  K+  L   D Q+L  +    K P   ++I   C 
Sbjct: 614 PDKLVELNLSESEIEELWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILKGCT 673

Query: 572 MLERLPDELENLEYLT---VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            L  +PD++ NL  LT   + G + +++LPE    +  +++L L + + +E +P SI+HL
Sbjct: 674 SLSAVPDDI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHL-DGTAIEELPTSIKHL 731

Query: 628 SKLTFLFISHCERLQTLPELPC----NLGLLSARNCTSLEKLPAGLSSM 672
           + LT L +  C+ L +LP++ C    +L +L+   C++L +LP  L S+
Sbjct: 732 TGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSL 780



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 145/322 (45%), Gaps = 40/322 (12%)

Query: 463  ISLDMNKVNREIHMNSYAFSKMPK-------LRFLRFYGDKNKCMVSHLEGVPFAEVRHL 515
            I  DM ++ R++H++  A  ++P        L  L     KN   +  +       ++ L
Sbjct: 704  IGEDMKQL-RKLHLDGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQIL 762

Query: 516  EWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDD---VQRLPSSLCTFKTPITFEIIDCKM 572
                C    LN   E L SL+     +++L+     +Q LP+S+          + +CK 
Sbjct: 763  NVSGC--SNLNELPENLGSLEC----LQELYASRTAIQELPTSIKHLTDLTLLNLRECKN 816

Query: 573  LERLPD----ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            L  LPD     L +L+ L + G + + ELPE+LG L  +K L  S  + + ++PESI  L
Sbjct: 817  LLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLKCLKDLYASRTA-ISQVPESISQL 875

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            S+L  L +  C  LQ+LP LP ++ ++S +NC  L+    G  S    ++ +   F  L 
Sbjct: 876  SQLEELVLDGCSMLQSLPGLPFSIRVVSVQNCPLLQ----GAHSNKITVWPSAAGFSFLG 931

Query: 688  PNELSEIVKDGWM--KHSLYE----------ERGIKKSMYFPGNEIPKWFRHQSMGSSAT 735
                ++I +  W+  KH L+           +RG      +  NEIP W   +S  S+ T
Sbjct: 932  RQGNNDIGQAFWLPDKHLLWPFYQTFFEGAIQRGEMFEYGYRSNEIPAWLSRRSTESTIT 991

Query: 736  LKTRPPRPAGYNKLISFAFCAV 757
            +   P    G NK I  A C V
Sbjct: 992  IPL-PHDLDGKNKWIKLALCFV 1012


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 1378

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 257/844 (30%), Positives = 409/844 (48%), Gaps = 154/844 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFT HL+  L    I+ F D++ L RGD+I+  LL  IE S   I 
Sbjct: 21  WDVFLSFRGEDTRHNFTDHLYTQLDRNGIRAFRDNEGLNRGDDINSGLLDAIEDSAAFIA 80

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE-K 102
           I S  YASSRW                  FY+VDPS VR+Q   F   F +L  RF E K
Sbjct: 81  IISPNYASSRWCLEELAKVCECRRLILPVFYQVDPSDVRRQKGRFHEDFGKLEARFGEDK 140

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           + RW+ A+ +A  ++G+  N    E  LI+ +   VL  L+ T  S     VG++  IEE
Sbjct: 141 VLRWRKAMEKAGGIAGWVFNG-DEEPNLIQTLVKRVLAELNNTPLSVAAYTVGLDSRIEE 199

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---EETGG 219
           + +LL + S     L   G+GG+ K T+A A++NK+  HFE   F  NV+E    ++   
Sbjct: 200 LLNLLDLKSNCTRVLGFHGMGGVGKTTLAKALYNKLVAHFECRSFISNVKETLAQQDEDS 259

Query: 220 IKDLQKKLLSELS--KDGNMRNIESQLNRLAR----KKVRIVFDDVT------------- 260
           +  L  KL+++LS  +   +  + + L  + R    K+V +V DDV              
Sbjct: 260 LLSLHNKLINDLSMSEASPVSEVNAGLVAIRRIMHEKRVLLVMDDVDDASQLEVVIGRRK 319

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITTRD+ VL++   N+ + ++ L ++++ +LF   A   +        
Sbjct: 320 WRQFFYGGSRIIITTRDRGVLRDLHENELFEVQGLNFSESLQLFSYHALRREKPTEDFWN 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L+++ +    G+PLAL+V G +L   R  + WE A++KL+ I    +++VLKIS+D LD+
Sbjct: 380 LSNEIVSLTGGLPLALEVFGSFLYDKRIIKEWEDALQKLKQIRPSNLQDVLKISFDGLDE 439

Query: 374 SQKNVFLDIACFLEGEH--RDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
            +K++FLDIACF       R++ I I                 KSLI       + MHD 
Sbjct: 440 QEKDIFLDIACFFVKMRLKREDAIDILKGCGFRADITIKVLTEKSLIKTYEDGILWMHDQ 499

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN------- 471
           LRDMG++IV+ E+ + PG R+RLW H ++  VL+  TGT +I+GI  +  K +       
Sbjct: 500 LRDMGKQIVQHENPSDPGSRSRLWDHNEVMSVLQDQTGTRSIQGIVPEFKKKDASPESSS 559

Query: 472 ----REIHMNSYAFSKMPKLRFLRFY--GDKNKCM-----------------VSHLE--- 505
               +  H  + A   + K    RF+   DK + M                 ++H++   
Sbjct: 560 QNSLQTKHKFTRAILPLKKTIKERFHPKADKERVMLLCTKSFQPMVTLRLLQINHVQLGG 619

Query: 506 ---GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW-------------- 546
               +P +E++ L+W  CPLKTL    C  KL  L +  +K+E++W              
Sbjct: 620 NFKNIP-SELKWLQWKGCPLKTLPSTFCPRKLTVLDLSESKIERVWGCHNKKVAENLMVM 678

Query: 547 -----DDVQRLPS----------------SLCT-------FKTPITFEIIDCKMLERLPD 578
                + +  LP                 SL T        +T +   ++ C  L   P 
Sbjct: 679 NLSGCNSLTDLPDVSGHQTLEKLILERCLSLVTIHKSVGDLRTLLHLNLMGCSNLLEFPS 738

Query: 579 E---LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
           +   L +LE   + G T ++ELPE +  ++ ++ L++ + + +  +P+SI  L KL    
Sbjct: 739 DVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLV-DKTAIVNLPDSIFRLKKLEKFS 797

Query: 635 ISHCERLQTLPELPCNLGLLS--ARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNE 690
           +  C  L+ LP+    L  L   + N + LE+LP  + S++++  ++L  C  L   P+ 
Sbjct: 798 LDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGSLTNLERLSLMRCRLLSAIPDS 857

Query: 691 LSEI 694
           +  +
Sbjct: 858 VGRL 861



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 29/162 (17%)

Query: 539 CTKVEQLWDD----------------VQRLPSSLCTFKTPITFEIIDCKMLERLPD---E 579
           CTK+++L +D                +  LP S+   K    F +  C  L++LPD    
Sbjct: 754 CTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGR 813

Query: 580 LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           L +L  L++ G+ + ELP+S+G L+ ++RL L     L  IP+S+  L  L  LFI +  
Sbjct: 814 LSSLRELSLNGSGLEELPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLRSLIELFICN-- 871

Query: 640 RLQTLPELPCNLG------LLSARNCTSLEKLPAGLSSMSSV 675
              ++ ELP ++G       LS  +C SL KLP  +  + S+
Sbjct: 872 --SSIKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEGLVSL 911



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKGTTIRELPESLGRLSWVKRL 609
            +P  + +     T E+ +C++    P  + + +L  L +  + I ELPES+G+L  +  L
Sbjct: 924  VPDQVGSLNMLETLEMRNCEIFSSFPEINNMSSLTTLILDNSLITELPESIGKLERLNML 983

Query: 610  ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP 666
            +L+N   L+R+P SIR L  L  L ++       + ELP N G+LS      + K P
Sbjct: 984  MLNNCKQLQRLPASIRKLKNLCSLLMTR----TAVTELPENFGMLSNLRTLKMAKHP 1036



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 19/145 (13%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LP+S+ +        +  C+ L +LPD +E L  L    + GT +  +P+ +G L+ 
Sbjct: 874  IKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEGLVSLARFQLDGTLLTGVPDQVGSLNM 933

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
            ++ L + N       PE I ++S LT L + +      + ELP ++G      +L   NC
Sbjct: 934  LETLEMRNCEIFSSFPE-INNMSSLTTLILDN----SLITELPESIGKLERLNMLMLNNC 988

Query: 660  TSLEKLPAGLSSMSSVLYVNLCNFL 684
              L++LPA +  +      NLC+ L
Sbjct: 989  KQLQRLPASIRKLK-----NLCSLL 1008



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 34/150 (22%)

Query: 602  RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
            +LS ++ L L +N N   +P S++ LS L  LF+ HC+ + +LP LP +L  L+  NC +
Sbjct: 1090 KLSSLEDLNLGHN-NFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNCCA 1148

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLKLD-----------------------PNELSEIVKDG 698
            L+ + + LS++ S+  +NL N  K+                        P   S I K  
Sbjct: 1149 LQSV-SDLSNLKSLEDLNLTNCKKIMDIPGLQCLKSLKRFYASGCNACLPALKSRITKVA 1207

Query: 699  WMKHSLYEERGIKKSMYFPGNEIPKWFRHQ 728
             +KH LY       ++  PG+EIP WF  +
Sbjct: 1208 -LKH-LY-------NLSVPGSEIPNWFVQE 1228


>gi|82542035|gb|ABB82025.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 735

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 217/614 (35%), Positives = 331/614 (53%), Gaps = 80/614 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I+ F  DD L RG+ IS  LL  I+ S I+I+
Sbjct: 52  YDVFLSFRGEDTRKTFTDHLYSALVQAGIRAFRDDDDLPRGEEISDHLLRAIQESKISIV 111

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F+   +R
Sbjct: 112 VFSKGYASSRWCLNELVEILECKNRKTGQIVLPIFYHIDPSDVRKQNGSFAEAFANNEER 171

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA +LSG++ N +    E+K I+EI  DVL +LD  +    + LVG
Sbjct: 172 FEEKLVKEWRKALEEAGNLSGWNLNHMANGHEAKFIKEIIKDVLNKLDPKYFYVPEHLVG 231

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++     I   L   ++ V  + I G+ GI K TIA  VFN++   FEGS F  N+ E +
Sbjct: 232 MDRLAHNIFDFLSTATDHVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETS 291

Query: 215 EETGGIKDLQKKLLSE-LSKDGNMRNIESQLNRLARK------------------KVRIV 255
           ++  G+  LQ++LL + L +D    N + +   L ++                  +++ +
Sbjct: 292 KQFNGLALLQRQLLHDILKQDAANINCDDRGKVLIKERLRRKRVVVVADDVAHQDQLKAL 351

Query: 256 FDDVT---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
             + +    GS VIITTRD  +L+   A++ Y ++EL   ++ +LF   A         +
Sbjct: 352 MGERSWFGPGSIVIITTRDSNLLRE--ADQTYPIEELTPDESLQLFSWHALRDTKPTEDY 409

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+   + Y  G+PLAL+V+G  L G++++ W+S + KL  IP+ +I+  L+IS+DSLD
Sbjct: 410 IELSKDVVDYCGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQGKLRISFDSLD 469

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ V  +  A               +SLI + L   + MHD
Sbjct: 470 GEELQNAFLDIACFFIDRRKEYVAKVLGARCGYNPEVDLQTLHERSLIKV-LGETVTMHD 528

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LLRDMGRE+VR+ S   PGKR R+W+  D + VL++  GT+ +EG++LD+ + +    ++
Sbjct: 529 LLRDMGREVVRESSPKEPGKRTRIWNQGDAWNVLEQQKGTDVVEGLALDV-RASEAKSLS 587

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEKL 532
           + +F++M  L  L+  G        HL G   +   E+  + W QCPLK    +   + L
Sbjct: 588 AGSFAEMKCLNLLQING-------VHLTGSFKLLSKELMWICWLQCPLKYFPSDFTLDNL 640

Query: 533 VSLKMPCTKVEQLW 546
             L M  + +++LW
Sbjct: 641 AVLDMQYSNLKELW 654


>gi|356542395|ref|XP_003539652.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1396

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 250/762 (32%), Positives = 384/762 (50%), Gaps = 100/762 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRG  TR  FT+ L++ L  K I TF D + +R G +I  +LL  IE S ++++
Sbjct: 16  YDVFLSFRG-GTRYGFTNRLYNALRQKGIYTFRDTEELRIGADIRPALLKAIENSRMSMV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +  E YASS W                       FY+V PS V  Q +S+ +  +    R
Sbjct: 75  VLCEDYASSTWCLDELAKIIQCYHANKPKQVLLIFYKVQPSDVWDQKNSYAKAMADHENR 134

Query: 99  F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F   PEK+K W+ AL++   L+         E++LI++I  D   +L        K +VG
Sbjct: 135 FAKQPEKVKNWRKALSQLRHLTREYCKDDGYEAELIKKIVKDTSAKL-PPIPLPIKHVVG 193

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++    +++S++ I S + V  L I+G GGI K T A  ++N I   FE + F  NVRE 
Sbjct: 194 LDSRFLDVKSMIHIESHDTVLILEIYGAGGIGKTTFALDIYNNIRHEFEAASFLANVREK 253

Query: 215 --EETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSG---------- 262
             + T G++DLQK LLSE+ ++  +        RL  KKV +V DDV S           
Sbjct: 254 SNKSTEGLEDLQKTLLSEMGEETEIIGASEIKRRLGHKKVLLVLDDVDSTKQLESLVGGG 313

Query: 263 ------SRVIITTRDKQVLKNCWAN----KKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                 SR+IITTRD  +L     +    + Y MK L Y D+ +LFC  AF       + 
Sbjct: 314 DWFGSRSRIIITTRDTTLLDEHVIDDVVIETYEMKALNYGDSLELFCWHAFNMSKPAENF 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             +++ A++YA+G PLALKV+G  L G S + WE  + K ++IP+ +I+EVL+ISY SLD
Sbjct: 374 EGVSNDAVRYAKGHPLALKVIGSNLKGGSLKDWEMELEKYKMIPNAKIQEVLEISYHSLD 433

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-----------SKSLINLDLFYRIRMHDLLRD 421
              + +FLDIACF +GE R  V  I  A           +K LI +D    + MHDL++D
Sbjct: 434 VLDQKIFLDIACFFKGERRGYVERILKACDFCPSIGVFTAKCLITIDEDGCLDMHDLIQD 493

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD---MNKVNREIHMNS 478
           MGREIVRKES  + G R+RLW H+++ +VL +N+G+  IEGI LD     KV+  I    
Sbjct: 494 MGREIVRKESSINAGDRSRLWSHEEVLRVLIENSGSNRIEGIMLDPPSHEKVDDRIDT-- 551

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF KM  LR L           S+L       +R LEW   P K+   +    K+V  K
Sbjct: 552 -AFEKMENLRILIIRNTTFSTAPSYLPNT----LRLLEWKGYPSKSFPPDFYPTKIVDFK 606

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTI 593
           +  + +         L  S   ++      +  C+ + R+PD     NL+ LT+ K   +
Sbjct: 607 LNHSSL--------MLEKSFKKYEGLTFINLSQCQSITRIPDVSGAINLKVLTLDKCRKL 658

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLS--KLTFLFISHCERLQTLPEL---- 647
           +   +S+G   +++ L+  +      +   +  +S   L  L  S C RL+  P++    
Sbjct: 659 KGFDKSIG---FMRNLVYVSALRCNMLKSFVPSMSLPSLEVLSFSFCSRLEHFPDVMEEM 715

Query: 648 --PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
             P  + L++    T++++ P  +  ++ + Y+++    KL+
Sbjct: 716 DRPLKIQLVN----TAIKEFPMSIGKLTGLEYLDISGCKKLN 753


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 251/770 (32%), Positives = 390/770 (50%), Gaps = 99/770 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRG+D R NF SH+      K I  FID+++ RG++I   L+  I  S IAI++
Sbjct: 78  HHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRESKIAIVL 137

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS+W                      FY VDPSHV+K +  FG  F +  K R 
Sbjct: 138 LSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYEVDPSHVKKLTGEFGAVFQKTCKGRT 197

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-DATFQSKNKGLVGVEC 158
            E + RW+ A  E A ++G+DS     E+ +IEEIA ++ KRL +++  S  +GL+G++ 
Sbjct: 198 KENIMRWRQAFEEVATIAGYDSRNWENEAAMIEEIAIEISKRLINSSPFSGFEGLIGMKA 257

Query: 159 SIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            IE+++ LLC+ S    + + I G  GI K TIA  + N+IS  F+ S F +  + +   
Sbjct: 258 HIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVF-MKFKPSYTR 316

Query: 218 GGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
               D       L+++ L++L   +D  +  + +  N +  KKV IV D V         
Sbjct: 317 PICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLDGVDQLVQLLAM 376

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+D+Q+LK       Y +      +A ++FC  AFG D  D    
Sbjct: 377 PKAVCLGPGSRIIITTQDQQLLKAFQIKHIYNVDFPPDHEALQIFCIHAFGHDSPDDGFE 436

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L  K  + A  +PL L+V+G +  G SKE W+  + +L I    EI  +LK SYD LDD
Sbjct: 437 KLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKFSYDVLDD 496

Query: 374 SQKNVFLDIACFLEGEHRDEV---------------ISIFDASKSLINLDLFYRIRMHDL 418
             K++FL IACF   E  D                 + +    +SLI+ DL     MH+L
Sbjct: 497 EDKDLFLHIACFFNDEGIDHTFEDTLRHKFSNVQRGLQVL-VQRSLISEDLTQ--PMHNL 553

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L  +GREIVR +S+  PGKR  L   K+I +VL  +TG+E++ GI+ ++     E++++ 
Sbjct: 554 LVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELNISD 613

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICAEKLV 533
             F  M  L+F RF  D+N     HL +G+ +   ++R L W   P+ +L      + LV
Sbjct: 614 RVFEGMSNLQFFRF--DENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFNLKFLV 671

Query: 534 SLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLP 577
            + +  +++E+LW+ +Q L +                +L T    +   + DC  L  LP
Sbjct: 672 KIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIELP 731

Query: 578 DEL---ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
             +    N++ L ++G +++ +LP S+G L  + RL L   S+L  +P SI +L  L  L
Sbjct: 732 SSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRL 791

Query: 634 FISHCERLQTLPELPCNLGLLSA---RNCTSLEKLPAGLSSMSS--VLYV 678
            +  C  L  LP    NL  L A     C+SL +LP+ + ++ S  +LY+
Sbjct: 792 DLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYL 841



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 18/191 (9%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENL----EYLTVKGTTIRELPESLGRLSWVK 607
            LPSS+         ++  C  L  LP  + NL    E    + +++ ELP S+G L  ++
Sbjct: 1113 LPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQ 1172

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
             L LS  S+L  +P SI +L  L  L ++ C +L +LP+LP +L +L A +C SLE L  
Sbjct: 1173 ELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLAC 1232

Query: 668  GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
               +    +++   +  KL+      IV+     +++            PG E+P +F +
Sbjct: 1233 SFPNPQ--VWLKFIDCWKLNEKGRDIIVQTSTSNYTM-----------LPGREVPAFFTY 1279

Query: 728  Q-SMGSSATLK 737
            + + G S  +K
Sbjct: 1280 RATTGGSLAVK 1290



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEY--LTVKG-TTIRELPESLGRLSWVKR 608
            LP S+       T  +  C  L  LP  + NL    L + G +++ ELP S+G L  +K+
Sbjct: 1066 LPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKK 1125

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEKL 665
            L LS  S+L  +P SI +L  L  L++S C  L  LP       NL  L    C+SL +L
Sbjct: 1126 LDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVEL 1185

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            P+ +         NL N  KLD N+ +++V    +  SL
Sbjct: 1186 PSSIG--------NLINLKKLDLNKCTKLVSLPQLPDSL 1216



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENL----EYLTVKGTTIRELPESLGRLSWVK 607
            LP S+       T  + +C  L  LP  + NL    E    + +++ ELP S+G L  +K
Sbjct: 994  LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 1053

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKL 665
            +L LS  S+L  +P SI +L  L  L +S C  L  LP    NL L  L    C+SL +L
Sbjct: 1054 KLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVEL 1113

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
            P+ +         NL N  KLD +  S +V+
Sbjct: 1114 PSSIG--------NLINLKKLDLSGCSSLVE 1136



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 7/136 (5%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLSWVK 607
            LPSS+          + +C  L  LP     L NL+ L + G +++ ELP S+G L  +K
Sbjct: 946  LPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLK 1005

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEK 664
             L LS  S+L  +P SI +L  L  L++S C  L  LP       NL  L    C+SL +
Sbjct: 1006 TLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVE 1065

Query: 665  LPAGLSSMSSVLYVNL 680
            LP  + ++ ++  +NL
Sbjct: 1066 LPLSIGNLINLKTLNL 1081



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           +++ ELP S+G L  +K+L LS  S+L  +P SI +L  L  L++S C  L  LP    N
Sbjct: 869 SSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGN 928

Query: 651 LGLLSARN---CTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIV 695
           L  L   N   C+SL +LP+ + ++ ++  LY++ C+ L   P+ +  ++
Sbjct: 929 LINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLI 978



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 569  DCKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            +C  L  LP  + NL  L      + +++ ELP S+G L  ++ L LS  S+L  +P SI
Sbjct: 915  ECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI 974

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV--LYVN 679
             +L  L  L +S C  L  LP    NL  L   N   C+SL +LP+ + ++ ++  LY++
Sbjct: 975  GNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLS 1034

Query: 680  LCNFLKLDPNELSEIV 695
             C+ L   P+ +  ++
Sbjct: 1035 ECSSLVELPSSIGNLI 1050



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLSWVK 607
           LPSS+         +++ C  L  LP     L NLE     G +++ ELP S+G L  +K
Sbjct: 778 LPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLK 837

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEK 664
            L L   S+L  IP SI +L  L  L +S C  L  LP       NL  L    C+SL +
Sbjct: 838 ILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVE 897

Query: 665 LPAGLSSMSSV--LYVNLCNFLKLDPNELSEIV 695
           LP  + ++ ++  LY++ C+ L   P+ +  ++
Sbjct: 898 LPLSIGNLINLQELYLSECSSLVELPSSIGNLI 930


>gi|357474671|ref|XP_003607620.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508675|gb|AES89817.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1381

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 233/720 (32%), Positives = 375/720 (52%), Gaps = 97/720 (13%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
            YDVF+SFRG+DT +NF  HL   L  K I  F DD  L +G++I+  LL  IEAS + I+
Sbjct: 331  YDVFVSFRGQDTHNNFADHLFAALQRKGIVAFRDDSNLKKGESIAPELLHAIEASKVFIV 390

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS+ YASS W                      FY VDPS VR Q+ S+G   ++  +RF
Sbjct: 391  LFSKNYASSTWCLRELEYILHCSQVSGTRVLPIFYDVDPSEVRHQNGSYGEALAKHEERF 450

Query: 100  ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
                E ++RW+ +LT+ A+LSG+D +  +P+   IE+I  ++       F    K LVG+
Sbjct: 451  QHESEMVQRWRASLTQVANLSGWDMHH-KPQYAEIEKIVEEITNISGHKFSCLPKELVGI 509

Query: 157  ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
               IE++ +LL + S + V  + I G+GGI K T+  A+  +IS  F+   F  ++    
Sbjct: 510  NYPIEKVANLLLLDSVDDVRVVGICGMGGIGKTTLTTALCGRISHRFDVRCFIDDLSRIY 569

Query: 216  ETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT--------- 260
               G    QK++L +    +   + N+    N    RL R +  I+ D+V          
Sbjct: 570  RHDGPIGAQKQILHQTLGGEHFQIYNLYDTTNLIQSRLRRLRALIIVDNVDKVEQLDKLA 629

Query: 261  -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   +GSR++I +RD+ +LK    +  Y++  L   ++ +LFCQ AF  DH+ +S  
Sbjct: 630  VNRECLGAGSRIVIISRDEHILKEYGVDVVYKVPLLNGTNSLQLFCQKAFKLDHIMSSFD 689

Query: 314  ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            +LT   + YA G+PLA+KVLG +L GR    W+SA+ +L   P+ +I +V+++S++ L+ 
Sbjct: 690  KLTFDILSYANGLPLAIKVLGSFLFGRDIYEWKSALARLSKSPNKDIMDVMRLSFEGLEK 749

Query: 374  SQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
             +K +FLDIACF     +  V  + +               KSL+++     I MH LL+
Sbjct: 750  LEKEIFLDIACFFIQSKKIYVQKVLNCCGFHADIGLRVLIDKSLLSISEENNIEMHSLLK 809

Query: 421  DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL--DMNKVNREIHMNS 478
            ++GREIV+++SI    + +R+W H+ ++ ++ +N   + +E I    D+++   EI +  
Sbjct: 810  ELGREIVQEKSIKDSRRWSRVWLHEQLHNIMLENVEMK-VEAIYFPCDIDENETEILIMG 868

Query: 479  YAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE--K 531
             A SKM  LR L     +F G+          G    E+R++EW + P K L  C +  +
Sbjct: 869  EALSKMSHLRLLILKEVKFAGNL---------GCLSNELRYVEWGRYPFKYLPACFQPNQ 919

Query: 532  LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYL 586
            LV L M  + V+QLW D + LP+           +I+D    K L ++PD  E+ NLE L
Sbjct: 920  LVELIMRHSSVKQLWKDKKYLPN----------LKILDLSHSKNLRKVPDFGEMPNLEEL 969

Query: 587  TVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             +KG   + ++  S+G L  +  + L +  NL  IP +I  LS L +L +S C ++   P
Sbjct: 970  NLKGCIKLVQIDPSIGVLRKLVFMKLKDCKNLVSIPNNILGLSSLKYLNLSGCSKVFNNP 1029



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 43/287 (14%)

Query: 55  SCIAIIIFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRF---PEKMKRWKNALT 111
           S +  I  SER+      FY VDP  +R Q  ++   F +  +RF    E ++RW+ A T
Sbjct: 28  SILHCIKVSERHVLP--VFYDVDPYEMRYQKGNYVEAFFKHEQRFQQDSEMVQRWREAQT 85

Query: 112 EAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGS 171
           + A+L       +      IE+I  +++  L     S    L G++   EE+E  L + S
Sbjct: 86  QVANLW------LGCADAQIEKIVEEIMNILGYKSTSLPNYLAGMDSLTEELEKHLLLDS 139

Query: 172 -EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSE 230
            + V  + + G+GGI K  IA A++NKI   F   +   ++R+     G   L  + L  
Sbjct: 140 VDDVRVVGVCGMGGIGKKAIATALYNKIFHQFPVLFLIDDLRKIYRHDGPISLSHEWL-- 197

Query: 231 LSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELV 290
                                         +GSR+IIT RD+ +LK    +  Y++  L 
Sbjct: 198 -----------------------------CAGSRIIITFRDEHILKVFVVDVVYKVPLLN 228

Query: 291 YADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYL 337
             D+ +L  + AF  DHL +S+ +L    + YA G+PLA+KVLG +L
Sbjct: 229 GTDSLQLLSRKAFKIDHLMSSYDKLASDILWYANGLPLAIKVLGSFL 275



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 55/291 (18%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            LP+++G L  ++RL +  N N   +P S+R LSKL +L + HC+ L++LP+LP       
Sbjct: 1093 LPDAIGCLLRLERLNIGGN-NFVTLP-SLRELSKLVYLNLEHCKLLESLPQLPFP----- 1145

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM--------KHSLYEE 707
                T+ E +     ++  V++    N  KL  +E    +   WM        + S +  
Sbjct: 1146 ----TAFEHMTTYKRTVGLVIF----NCPKLGESEDCNSMAFSWMIQLIQARQQPSTFSY 1197

Query: 708  RGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV----VFPAF 763
              I K +  PG+EIP WF +QS G S  +          N  I  A CAV     V P  
Sbjct: 1198 EDIIK-IVIPGSEIPIWFNNQSEGDSIRMDLSQIMDNNDNDFIGIACCAVFSVAPVDPTT 1256

Query: 764  LKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF 823
                R    E  +              S  HL+S+ +  +  +E DH+ +  N     YF
Sbjct: 1257 TTCARRPKIELRFSN------------SNSHLFSFIIIPV-ILERDHIVVKSNHMCLMYF 1303

Query: 824  GPNYDEFSF-------RIHC-SFHFPPYLERG-----EVKKCGIHFVYAQD 861
             P    F           H    +    + +G     EV+ CG H+VY  D
Sbjct: 1304 -PQKSLFDILKWIDGTLTHLDDINMKASIMKGQGLDLEVQNCGYHWVYKPD 1353


>gi|357468599|ref|XP_003604584.1| Disease resistance-like protein [Medicago truncatula]
 gi|355505639|gb|AES86781.1| Disease resistance-like protein [Medicago truncatula]
          Length = 684

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 227/621 (36%), Positives = 336/621 (54%), Gaps = 81/621 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRG D RD F   L+     K I  F+D +L +GD+IS SL   IE S I+++I
Sbjct: 10  FDVFVSFRGNDVRDGFLGKLYEAFIRKQINIFVDYKLKKGDDISHSLGEAIEGSSISLVI 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YASS W                      FY VDP++VR Q  S+   F +L KR+ 
Sbjct: 70  FSENYASSHWCLEELVKIIECREKYGQLVIPIFYEVDPTNVRYQKKSYENAFVKLEKRYN 129

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             ++K W++ L  +A+L GF S+  R +++L+EEI N VL  L       +KGL+G++  
Sbjct: 130 SSEVKIWRHTLKISANLVGFTSSSFRNDAELLEEITNFVLMSLGKY----SKGLIGMDKP 185

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I  + SLL   S  V  + IWG+GGI K TIA  +F++I   ++G  F  NV    ++ G
Sbjct: 186 IAHLNSLLNKESGKVRVIGIWGMGGIGKTTIAKELFDQICSEYDGCCFMSNVSLGLQSRG 245

Query: 220 IKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
           I  L++ L S L        S +G   NI  +++R+   KV IV DD+            
Sbjct: 246 ITFLKEMLFSNLLNEDVKIDSSNGLSNNIHRRIDRM---KVLIVLDDIKEEGLLEMLFGT 302

Query: 261 -----SGSRVIITTRDKQVL--KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                S SR+I+T+RDKQVL       +  Y +  L  +DA  LF   AF   HL+  + 
Sbjct: 303 LDWFRSDSRIIVTSRDKQVLIANEVDDDDVYEVGVLNSSDALALFNLNAFKESHLEIKYY 362

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGR-SKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +L+ K + YA+G+PL LKVLG    G+ +K+ W   + KLE +P  EI++V+++SYD LD
Sbjct: 363 DLSKKVVDYAKGIPLVLKVLGHMFRGKHNKKTWVYQLEKLEKVPIQEIDKVMRLSYDDLD 422

Query: 373 DSQKNVFLDIACFLEG-----EHRDEVISIFDA------------SKSLINLDLFYRIRM 415
             ++  FLDIACF  G     ++   ++  +++             K+LI +     I M
Sbjct: 423 LLEQKYFLDIACFFNGLNLKVDYMKLLLKDYESDNSVAVGLERLKDKALITISEDNVISM 482

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HD  + MGRE+VR ESI  P K++RLW   DI  VL+ + GT+AI  I ++++ V   + 
Sbjct: 483 HDFQQKMGREVVRLESIKDPSKQSRLWDPDDICYVLENDKGTDAIRSIRVNLSSV-WMLK 541

Query: 476 MNSYAFSKMPKLRFLRFYGD-KNKC---MVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
           ++ + F+KM  L+FL F+G   N C   +   L+  P  ++R+L W   PLK+   N  A
Sbjct: 542 LSPHVFAKMTNLKFLNFFGGYDNDCLDLLPRGLQSFP-NDLRYLRWVCYPLKSFPENFSA 600

Query: 530 EKLVSLKMPCTKVEQLWDDVQ 550
           E LV L +  +KVE+LW  VQ
Sbjct: 601 ENLVILNLRYSKVEKLWCGVQ 621


>gi|224144411|ref|XP_002325281.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|224145731|ref|XP_002325746.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862156|gb|EEE99662.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862621|gb|EEF00128.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 526

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 199/517 (38%), Positives = 287/517 (55%), Gaps = 67/517 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR+NFT HL+  L    I TF D ++L  G  IS  L   I  S I+++
Sbjct: 10  YDVFLSFRGADTRNNFTDHLYAALDQAGIYTFRDGNELPPGQEISSQLSRAIRESRISVV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASSRW                      FY +DPS+VRKQ  + G    R  + F
Sbjct: 70  VFSKGYASSRWCLDELVKILECRHAMGQLLVPIFYDIDPSYVRKQKWNVGEALKRKEEDF 129

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
               E++KRW+ AL EA ++SG+    +    ESK I++I  D+L +L        K  V
Sbjct: 130 EIEMERLKRWREALDEAGNISGWILKDMANGYESKFIQKIVEDLLHKLGPKCLDVAKYPV 189

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+E  ++ I  LL I S  V  + ++G+ GI K TIA AVFN++   FEGS F  NV+E 
Sbjct: 190 GIESRVDYIIDLLSIHSNDVRVVGVYGMPGIGKTTIAKAVFNQLCHGFEGSSFISNVKEK 249

Query: 215 EETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
                ++ LQ++LL ++ K      D   + +    +R   K+V +V DD          
Sbjct: 250 T----VEQLQEQLLCDILKPNTWKIDNVSKGVNLMKDRFRNKRVLVVLDDFDQLKQLEAL 305

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR++ITTRD+ +L     + KY +KEL   ++ +LF   AF   H +  +
Sbjct: 306 VRERNCFGPGSRIVITTRDEHLLTQIEVDGKYHVKELHQHESLQLFSLHAFKDTHPEEDY 365

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL++  + YA GVPLAL+VLG YL  R+  VW+SA++KL  IP+ +I++ L+IS+D+LD
Sbjct: 366 VELSNAIVDYAGGVPLALEVLGSYLFRRNISVWKSAIKKLRKIPNRQIQKTLRISFDTLD 425

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           D + K +FLDIACF  G  ++ V+ I D               +SL++++    + MHDL
Sbjct: 426 DDKVKAMFLDIACFFIGWDKEYVVEILDGRGFFPDIGIDILIQRSLLSINDENELNMHDL 485

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           +RDMGREI R+ S +HPGKRNR+W  +D   VL   T
Sbjct: 486 IRDMGREIAREVSYDHPGKRNRIWLLEDALDVLNNQT 522


>gi|357499513|ref|XP_003620045.1| Resistance protein [Medicago truncatula]
 gi|355495060|gb|AES76263.1| Resistance protein [Medicago truncatula]
          Length = 894

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 246/758 (32%), Positives = 384/758 (50%), Gaps = 114/758 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD  L RGD I+ SLL  I+ S I I 
Sbjct: 18  YQVFLSFRGTDTRHGFTGNLYKALTDKGIHTFIDDNDLPRGDEITPSLLKAIDESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      F+ V+P+ VR Q  S+G   +   KRF
Sbjct: 78  VFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTKVRHQKGSYGEALAEHEKRF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E+++ WK AL++AA+ SG+  +    E +   EI   +  ++           
Sbjct: 138 QNDKNNMERLQGWKVALSQAANFSGYHDSPPGYEYEFTGEIVKYISNKISRQPLHVANYP 197

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  ++E++SLL   S+ GV  + ++G GG+ K T+A A++N I+  FE S F  NVR
Sbjct: 198 VGLQSQVQEVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVR 257

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E   +  +K LQ++LL      E+   G    I     RL RKKV ++ DDV +      
Sbjct: 258 ENSTSNKLKHLQEELLLKTLQLEIKFGGVSEGIPYIKERLHRKKVLLILDDVDNMKQLHA 317

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS+VII TRDK +L        ++++ L   +A +L    AF  D++ + 
Sbjct: 318 LAGGPDWFGRGSKVIIATRDKHLLTCHGIKSMHKVEGLYGTEALELLRWMAFKSDNVPSG 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + E+ ++A+ YA G+PL ++++G  L G++ E W+  +   + IP+ EI+++LK+SYDSL
Sbjct: 378 YEEILNRAVAYASGLPLVIEIVGSNLFGKNIEEWKYTLDGYDRIPNKEIQKILKVSYDSL 437

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYR--IRM 415
           ++ +++VFLDIAC  +G + ++                    A KSLI+    YR  + +
Sbjct: 438 EEEEQSVFLDIACCFKGYNWEDAKYTLHSHYGHSITHHLGVLAEKSLIDQYWEYRDYVML 497

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL+ DMG+E+VR+ESI  PG+R+RL    DI +VL++NTGT  IE I ++++ +   I 
Sbjct: 498 HDLIEDMGKEVVRQESIKEPGERSRLCCQDDIVRVLRENTGTSKIEMIYMNLHSMESVID 557

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
               AF KM KL+ L     +N      L+ +P + +R L+W  C  K L  NI  +K  
Sbjct: 558 KKGKAFKKMTKLKTLII---ENGHFSGGLKYLP-SSLRVLKWKGCLSKCLSSNILNKKFQ 613

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
           ++K+                             +  C+ L  +PD   L NLE L+    
Sbjct: 614 NMKV---------------------------LTLNYCEYLTHIPDVSGLSNLEKLSFTCC 646

Query: 592 -TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
             +  +  S+G L+ ++ L       LER P     L+ L  L +S CE L + PEL C 
Sbjct: 647 DNLITIHNSIGHLNKLEWLSAYGCRKLERFPP--LGLASLKKLNLSGCESLDSFPELLCK 704

Query: 650 -----NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
                N+ L+S    TS+ +LP    ++S +  +++ N
Sbjct: 705 MTKIDNILLIS----TSIRELPFSFQNLSELQELSVAN 738


>gi|224145028|ref|XP_002325500.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862375|gb|EEE99881.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 709

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 207/569 (36%), Positives = 309/569 (54%), Gaps = 58/569 (10%)

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQKKLLSELSKDGNMRNI 240
           +GGI K TIA AVFN IS  +E   F  NVRE +EE GG+  L+++ LS + +  N+R  
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 241 ESQLN------RLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNC 278
             ++       R+  KKV  V DDV+                 GSR+++T+RD+QVLKN 
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLKNV 120

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
            A++ Y ++EL  ++A +LF    F G+H+   +  L+ +A+ YA+G PLALKVLG +L 
Sbjct: 121 -ADEIYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGSFLF 179

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
            + KE WE+A+ KLE  P ++I  +LK+S+D+L D +KN+FLDIACF +G+  D V  I 
Sbjct: 180 DQRKEDWENALNKLERNPQLKIYNMLKVSFDALGDEEKNIFLDIACFFKGKQIDYVKRIL 239

Query: 399 DASKSLINLDLFY------------RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
           D      N+ +F+            ++ MHDLL++M  EIVR+ESI   GKR+RLW  +D
Sbjct: 240 DGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRLWSPRD 299

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY----GDKNKCMVS 502
           + QVL KN GTE +EGI  D +K+ +EI ++S AF++M  LR L+ Y    G   K  + 
Sbjct: 300 VNQVLTKNLGTEKVEGIFFDTSKI-KEIKLSSKAFARMYNLRLLKIYNSEVGKNCKVYLP 358

Query: 503 HLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ-------RLP 553
           H       E+R+L W   PLK+L  N   E LV L +  +KV +LW   Q          
Sbjct: 359 HGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKVRELWKGDQVWFSQYTYAA 418

Query: 554 SSLCTFKTPI-----TFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
            +   F+  +        +  C  L+  P+  E++ YL    T I+ELP+S+G  S +  
Sbjct: 419 QAFRVFQESLNRKISALNLSGCSNLKMYPETTEHVMYLNFNETAIKELPQSIGHRSRLVA 478

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
           L L     L  +PESI  L  +  + +S C  +   P +P N   L     T++E+ P+ 
Sbjct: 479 LNLRECKQLGNLPESICLLKSIVIVDVSGCSNVTKFPNIPGNTRYLYLSG-TAVEEFPSS 537

Query: 669 LSSMSSVLYVNLCNFLKLD--PNELSEIV 695
           +  +S +  ++L N  +L   P E S  V
Sbjct: 538 VGHLSRISSLDLSNSGRLKNLPTEFSSSV 566


>gi|15238107|ref|NP_198970.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178009|dbj|BAB11461.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007308|gb|AED94691.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1085

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 236/738 (31%), Positives = 369/738 (50%), Gaps = 80/738 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH+  + K I TF D ++ +G+ I   L+  I  S ++I++
Sbjct: 13  YHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKDQEIEKGNTIGPELVNAIRESRVSIVL 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S++YASS W                      FY VDPS VRKQ   FG  F +  +   
Sbjct: 73  LSKKYASSSWCLDELVEILKCKEDQGQIVMTIFYDVDPSSVRKQKGDFGSTFMKTCEGKS 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW  ALT  A++ G  S     E+ +I++IA DV  +L  T     +G+VG+E  
Sbjct: 133 EEVKQRWTKALTHVANIKGEHSLNWANEADMIQKIATDVSTKLSVTPSRDFEGMVGLEAH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETG 218
           + ++ SLLC   + V  + IWG  GI K TIA A++N++S  F+   F  N++ + +   
Sbjct: 193 LTKLNSLLCFEGDDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCFMGNLKGSLKSIV 252

Query: 219 GI------KDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT---------- 260
           G+      K LQK LL+++   G+MR  N+ +    L  ++V I+ DDV           
Sbjct: 253 GVDHYEFQKSLQKLLLAKILNQGDMRVHNLAAIKEWLQDQRVLIILDDVDDLEQLEVLAK 312

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSR+I+ T DK++LK    N  Y +      +A ++ C  AF    +     E
Sbjct: 313 ELSWFGSGSRIIVATEDKKILKEHGINDIYHVDFPSMEEALEILCLSAFKQSSVPDGFEE 372

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  K +     +PL L ++G  L G SK  WE  + ++E     +IE +LK+ Y+ L   
Sbjct: 373 LAKKVVHLCGNLPLGLSIVGSSLRGESKHEWELQLPRIEASLDGKIESILKVGYERLSKK 432

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRM-HDLLR 420
            +++FL IACF      D V  +               A K  +++ +   I M H LL+
Sbjct: 433 NQSLFLHIACFFNYRSVDYVTVMLADSNLDVRNGLKTLADKCFVHISINGWIVMHHHLLQ 492

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +GR+IV ++S + PGKR  L   ++I  VL   TGT ++ GIS + + +  E+ ++  A
Sbjct: 493 QLGRQIVLEQS-DEPGKRQFLIEAEEIRAVLTDETGTGSVIGISYNTSNIG-EVSVSKGA 550

Query: 481 FSKMPKLRFLRF--YGDKNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSL 535
           F  M  LRFLR   Y    KC +   E + +   +R L W + P K+L      E+L+ L
Sbjct: 551 FEGMRNLRFLRIFNYLFSGKCTLQIPEDMEYLPPLRLLHWDRYPRKSLPTKFQPERLLEL 610

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TT 592
            MP + +E+LW  +Q LP+        ++F I     L+ +P+     NLE L +    T
Sbjct: 611 HMPHSNLEKLWGGIQPLPN---IKSIDLSFSI----RLKEIPNLSNATNLETLNLTHCKT 663

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + ELP S+  L  +K+L +S    L  IP +I +L+ L  + +++C RL+  P++  N+ 
Sbjct: 664 LVELPSSISNLHKLKKLKMSGCEKLRVIPTNI-NLASLEVVRMNYCSRLRRFPDISSNIK 722

Query: 653 LLSARNCTSLEKLPAGLS 670
            LS  N T +E  P  ++
Sbjct: 723 TLSVGN-TKIENFPPSVA 739


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 231/717 (32%), Positives = 369/717 (51%), Gaps = 92/717 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL+ + IKTF D++ +  G  I + +   IE S  +I+
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLNDRGIKTFQDEKRLEYGATIPEEICKAIEESQFSIV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 72  VFSENYATSRWCLNELVKIMECKNQFKQTVIPIFYDVDPSHVRSQKESFAKAFEEHETKY 131

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E+++ W+ AL  AA+L G   N  + ++  I +I + V  +L     S  + +VG+
Sbjct: 132 KNDAERIQIWRIALNAAANLKGSCDNRDKTDADCIRQIVDQVSSKLCKISLSYLQNIVGI 191

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +E+IESLL +    V  + IWG+GG+ K TIA  +F+ +      S  F+G+ F  +
Sbjct: 192 DTHLEKIESLLGLEINDVRIMGIWGMGGVGKTTIARGMFDTLLGRRDSSYQFDGACFLKD 251

Query: 211 VREAEETGGIKDLQKKLLSELSKDGNMRNIESQ-----LNRLARKKVRIVFDDVTS---- 261
           ++E +   G+  LQ  LLS L ++    N E +      +RL  KKV IV DD+      
Sbjct: 252 IKENKH--GMHSLQNILLSNLLREKANYNNEEEGKHQMASRLRSKKVLIVLDDIDDKDHY 309

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+I+TTRDK +++    +  Y +  L   ++ +L  Q+AFG    
Sbjct: 310 LEYLAGDLDWFGDGSRIIVTTRDKNLIEK--NDVIYEVSALPVHESIQLLNQYAFGKKVP 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D    +L+ + + YA+G+PLALKV G  L       W SAM +++   + EI E LKISY
Sbjct: 368 DEHFKKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWRSAMEQMKNNSNSEIVEKLKISY 427

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L+  Q+ +FLDIACFL GE +D ++ I ++              KSL+ +  + +++M
Sbjct: 428 DGLEPIQQEMFLDIACFLRGEEKDYILQILESCHIGVEYGLRILIDKSLVFISEYNQVQM 487

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++DM + IV  +    PG+R+RLW  +++ +V+  +TGT A+E I +  +  +  + 
Sbjct: 488 HDLIQDMAKYIVNFQ--KDPGERSRLWLAEEVEEVMSNSTGTMAMEAIWV--SSYSSTLR 543

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHL-EGVPFAEVRHLEWPQCPLKTLNICAEK-LV 533
            ++ A   M +LR            + +L   +      +  W   P    +I   K LV
Sbjct: 544 FSNEAMKNMKRLRIFNIGMSSTHDAIEYLPHNLCCFVCNNYPWESFP----SIFELKMLV 599

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KG 590
            L++    +  LW + + LPS           ++   K L R PD   + NLEY+ + + 
Sbjct: 600 HLQLRHNSLPHLWTETKHLPSLR-------RLDLSWSKRLMRTPDFTGMPNLEYVDLYQC 652

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           + + E+  SLG  S + +LIL+   +L++ P    ++  L +L +  C RL+ +PE+
Sbjct: 653 SNLEEVHHSLGCCSKLIQLILNGCKSLKKFPRV--NVESLKYLTVQGCSRLEKIPEI 707



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 98/272 (36%), Gaps = 78/272 (28%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRE------------- 595
            LPSS+C  K+ ++  +  C  LE LP+E   L+NL  L  + T I               
Sbjct: 752  LPSSICRLKSLVSLSVPGCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKLII 811

Query: 596  --------------------------------------LPESLGRLSWVKRLILSNNSNL 617
                                                  LPE +G LS +K+L LS N N 
Sbjct: 812  LMFGGFKDVVNFEFPPVAEGLRSLEHLDLTCCNLIDGGLPEDIGSLSSLKKLDLSRN-NF 870

Query: 618  ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
            E +P SI  L  L  L +  C+RL  LPELP  L  L   +C    K    L +    L 
Sbjct: 871  EHLPPSIAQLGALRSLDLKDCQRLTQLPELPPELSELRV-DCHMALKFIHDLVTKRKKL- 928

Query: 678  VNLCNFLKLDPNELSEIVKDGWMKHSLYEE-----RGIKKS-----MYFPGN----EIPK 723
                  LKLD      I       H+L++        I  S       F G     +IP 
Sbjct: 929  ----GRLKLDDAHNDTIY--NLFAHALFQNISSMRHDISASDSLSLRVFTGQLYLVKIPS 982

Query: 724  WFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
            WF HQ   SS  L   P      +K + FA C
Sbjct: 983  WFHHQGWDSSV-LVNLPGNWYIPDKFLGFAVC 1013


>gi|317415955|emb|CAR94520.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 806

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 252/770 (32%), Positives = 393/770 (51%), Gaps = 115/770 (14%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAIII 61
           +VFLSFR  D+R  FT +L+  L    I TF+D +QL  G+ +S  L    E S I++II
Sbjct: 24  EVFLSFRSFDSRKGFTDNLYKALIHYGIHTFMDAEQLESGEPVSTDLFKATEESQISVII 83

Query: 62  FSERYASSRW----------------------FFYRVDPSHVRKQ-SHSFGRHFSRLRKR 98
            S  YA+S W                       FY + PS  RKQ    F   F++ +K 
Sbjct: 84  LSTNYATSTWCLNELVTMVELAENNESRLILPVFYGMTPSEARKQIGVHFEEGFAQHKKD 143

Query: 99  F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F   P ++ RWK +LT  A+LSG+D    R E+ +IE+I   +   L  TF +  K  VG
Sbjct: 144 FEGEPGEVARWKKSLTAIANLSGYDIRNYRNETMVIEKIVERIFGVLINTFSNDLKDFVG 203

Query: 156 VECSIEEIESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  + EI+S +  IG+E V  + I G+ GI K TIA A+  +I   F+   F   V E 
Sbjct: 204 MD-RVNEIKSNMSRIGTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFISKVGEI 262

Query: 215 EETGGIKDLQKKLLSE-LSKDGNMRNIESQL-NRLARKKVRIVFDDVTS----------- 261
                +  ++++L    L+     +N++  +  RL  K+V IV D+V             
Sbjct: 263 SRKKSLFHIKEQLCDHLLNMQVTTKNVDDVIRKRLCNKRVLIVLDNVEELEQIDAVAGND 322

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS++IITT  +++L N +  K Y +++L   ++  LFC+ AF  DH   
Sbjct: 323 GADELSSRFGKGSKIIITTACERLLIN-YNPKIYTIEKLTQDESLLLFCRKAFKKDHPMD 381

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV---EIEEVLKIS 367
            + +L  + + Y  G+PLAL+V G  L  RS E W S +  L+   +    +I   LK S
Sbjct: 382 GYEKLCYEFLDYVDGLPLALEVFGNSLLNRSVEDWSSRLASLKDDNYSGKNKIVNYLKES 441

Query: 368 YDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDASKSL--INLDLFY----------RIR 414
           +D L++  Q+ +FLDIACF +GE    V +IF++      INL++            ++ 
Sbjct: 442 FDGLENQEQREIFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKYLVSIVGGKLW 501

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH+LL+ MGRE+VR ES    G R+RLW H +   VLK N GT+A++GI L +   ++ +
Sbjct: 502 MHNLLQQMGREVVRGES-KKEGARSRLWLHTEAIHVLKGNKGTDAVQGIFLSLPHPDK-V 559

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           H+    FS M  LR L+ Y  +    + +L      E+  LEW + PLK+L  +   +KL
Sbjct: 560 HLKKDPFSNMDNLRLLKIYNVEFSGCLEYLSD----ELSFLEWHKYPLKSLPSSFEPDKL 615

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG 590
           V L +  +++EQLW++++R    L      +   + DC+ L ++P  D++ NLE L +KG
Sbjct: 616 VELNLSESEIEQLWEEIERPLEKL------LILNLSDCQKLIKIPDFDKVPNLEQLILKG 669

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPE-----------------------SIRH 626
            T++ E+P+ +  L  +   ILS  S LE++PE                       SI H
Sbjct: 670 CTSLSEVPDIIN-LRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAIEELPTSIEH 728

Query: 627 LSKLTFLFISHCERLQTLPELPCN----LGLLSARNCTSLEKLPAGLSSM 672
           LS LT L +  C+ L +LP++ C+    L +L+   C++L+KLP  L S+
Sbjct: 729 LSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSNLDKLPDNLGSL 778


>gi|357499511|ref|XP_003620044.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495059|gb|AES76262.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1301

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 237/747 (31%), Positives = 374/747 (50%), Gaps = 126/747 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFID+  L RGD I+ +LL  I+ S I I 
Sbjct: 20  YQVFLSFRGTDTRYGFTGNLYKALTDKGIHTFIDENDLRRGDEITPALLKAIDESRIFIP 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS +YASS +                      F+ V+PSHVR    S+G+  +  +KRF
Sbjct: 80  VFSIKYASSSFCLDELVHIIHCYTTKGRVVLPVFFGVEPSHVRHHKGSYGQALAEHKKRF 139

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  ++++RWK AL++AA+ SG+  +    E +LI +I  ++  ++           
Sbjct: 140 QNDEDNIKRLQRWKVALSQAANFSGYHDSPPGYEYELIGKIVKEISNKISRQPLHVANYP 199

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +G++  +++++SLL   S+ GV  + ++G GG+ K T+A A++N I+  FE S F  NVR
Sbjct: 200 IGLQSRVQQVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVR 259

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E   +  +K LQ++LL      E+   G    I     RL   K+ ++ DDV        
Sbjct: 260 ENSASNKLKHLQEELLLKTLQLEIKLGGVSEGISHIKERLHSMKILLILDDVDDMGQLQA 319

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRD+ +L +    +KY ++ L   +A +L    AF  + + + 
Sbjct: 320 LAGEPDWFGLGSRVIITTRDRHLLTSHDIERKYALEGLCRTEALELLRWMAFKNNKVPSV 379

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++ ++A+ YA G+PL L+V+G  L G+  E W+  +   E IP+ +I E+LK+SYD+L
Sbjct: 380 YEDVLNRAVSYASGLPLVLEVVGSNLFGKRIEEWKGTLEGYEKIPNKKIHEILKVSYDAL 439

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLF-----YR 412
           ++ Q++VFLDIAC  +G   + V  I                A KSL+ +  +     Y+
Sbjct: 440 EEEQQSVFLDIACCFKGCGLEVVEDILRAHYGHCITHHLGVLAEKSLVQICTYHSGSIYK 499

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + +H+L+ DMG+E+VR+ES   PG+R+RLW   DI  VL +NTGT  IE I L+   +  
Sbjct: 500 VTLHNLIEDMGKEVVRQESPKEPGERSRLWCQDDIVHVLTENTGTRNIEMIHLNCPSMEN 559

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
            I  N  A  KM  L+ L     +N       + +P + +R  +W  CP K+L+ C   +
Sbjct: 560 VIEWNGKAMKKMTNLKTLII---ENGQFSRGPDYLP-SSLRFCKWNGCPSKSLSSC---I 612

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           ++ K    KV                       ++  C+ L ++PD   L NLE L+ + 
Sbjct: 613 LNKKFNYMKV----------------------LKLNSCQYLTQIPDVSGLPNLEKLSFQF 650

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP--ELP 648
                                    NL  I  S+  L++L  L   +C +LQ++P  +LP
Sbjct: 651 C-----------------------ENLITIHNSVGFLNRLEILDAKYCIKLQSVPPLQLP 687

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSV 675
           C L  L    C SL+  P  L  M+++
Sbjct: 688 C-LKRLELAMCKSLKSFPELLCKMTNL 713


>gi|357456965|ref|XP_003598763.1| Resistance protein [Medicago truncatula]
 gi|355487811|gb|AES69014.1| Resistance protein [Medicago truncatula]
          Length = 1184

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 261/796 (32%), Positives = 402/796 (50%), Gaps = 116/796 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLS-LKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           YDVFLSFRG DTR+NFT +L+H L   + I+TF+DD+ I +G+ I+ +LL  I+ S I I
Sbjct: 18  YDVFLSFRGIDTRNNFTGNLYHSLHHQRGIQTFMDDEEIQKGEEITPTLLQAIKQSRIFI 77

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            IFS  YASS +                      FY VDPS +R  + ++   F++   R
Sbjct: 78  AIFSPNYASSTFCLTELVTILECSMLQGRLFLPVFYDVDPSQIRNLTGTYAEAFAKHEVR 137

Query: 99  FPE----KMKRWKNALTEAADLSGFDSNV-IRPESKLIEEIANDVLKRLDATFQSKNKGL 153
           F +    K+++W++AL +AA++SG+        E K IE+I  +V  +++          
Sbjct: 138 FGDEKDSKVQKWRDALRQAANVSGWHFKPGFESEYKFIEKIVEEVSVKINRIPLHVATNP 197

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG+E  I E+ SLL   S E V  + I+GIGGI K T A AV N I+  FEG  F  ++R
Sbjct: 198 VGLESQILEVTSLLGFDSNERVNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIR 257

Query: 213 EAEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS----- 261
           + E    +  LQ+ LL+++  + ++      R +     RL RKKV ++ D+V       
Sbjct: 258 KREINHDLAQLQETLLADILGEKDIKVGDVYRGMSIVKRRLQRKKVLLILDNVDKVQQLQ 317

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS+VI+TTRDK +L      K Y +K+L    A +LF   AF    +D 
Sbjct: 318 AFVGGHDWFGFGSKVIVTTRDKHLLATHGIVKVYEVKQLKSEKALELFSWHAFKNKKIDP 377

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            ++++  + + Y  G+PLAL+V+G +L G+S  VW+S++ K + +   +I E+LK+SYD 
Sbjct: 378 CYVDIAKRLVSYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKRVLRKDIHEILKVSYDD 437

Query: 371 LDDSQKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIRMH 416
           L++ +K +FLDIACF              L G   ++ I +    KSL+ +D+   +RMH
Sbjct: 438 LEEDEKGIFLDIACFFNSYEISYVKELLYLHGFQAEDGIQVL-IDKSLMKIDINGCVRMH 496

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL++ MGREIVR+ES + PG+R+RLW   DI +VL++N GT+ IE I  D+ K  R++  
Sbjct: 497 DLIQGMGREIVRRESTSEPGRRSRLWFSDDIVRVLEENKGTDTIEVIIADLRK-GRKVKW 555

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
              AF +M  LR L     +N       + +P   +  L+W    L +L  +   + LV 
Sbjct: 556 CGKAFGQMKNLRILII---RNAGFSRGPQILP-NSLSVLDWSGYQLSSLPSDFYPKNLVI 611

Query: 535 LKMP--CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
           L +P  C K    W +      SL  F+T    +   CK+L  +P               
Sbjct: 612 LNLPESCLK----WFE------SLKVFETLSFLDFEGCKLLTEMP--------------- 646

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPC 649
                 SL R+  +  L L   +NL +I +S+  L +L  L    C +L+ L     LP 
Sbjct: 647 ------SLSRVPNLGALCLDYCTNLNKIHDSVGFLERLVLLSAQGCTQLEILVPYINLP- 699

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL-CNFLKLDPNELSEIVKDGWMKHSLYEER 708
           +L  L  R C+ LE  P  +  M ++  V L    LK  P  +  ++  G  +  L   R
Sbjct: 700 SLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTALKQLPFTIGNLI--GLRRLFL---R 754

Query: 709 GIKKSMYFPGNEIPKW 724
           G +  +  P   +PK+
Sbjct: 755 GCQGMIMLPSYILPKF 770


>gi|357500091|ref|XP_003620334.1| Sucrose synthase [Medicago truncatula]
 gi|355495349|gb|AES76552.1| Sucrose synthase [Medicago truncatula]
          Length = 1319

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 245/762 (32%), Positives = 381/762 (50%), Gaps = 109/762 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K IKTFIDD  L RGD I+ SLL  IE S I I 
Sbjct: 18  YQVFLSFRGTDTRHGFTGNLYKALTDKGIKTFIDDNDLQRGDEITPSLLKAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA+S++                      F+ VDP++VR  +  +G   +   KRF
Sbjct: 78  VFSINYATSKFCLDELVHIIHCYKTEGRLVLPVFFGVDPTNVRHHTGRYGEALAGHEKRF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++ +WK ALT+AA+LSG+ S+    E K I +I   +  ++           
Sbjct: 138 QNDKNNMERLHQWKLALTQAANLSGYHSSH-GYEYKFIGDIVKYISNKISRQPLHVANYP 196

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  ++ ++SLL  GS+ GV  + ++G GG+ K T+  A++N IS  FE S F  NVR
Sbjct: 197 VGLQSRVQHVKSLLDEGSDDGVHMVGLYGTGGLGKSTLGKAIYNFISDQFECSCFLENVR 256

Query: 213 EAEETGGIKDLQKKLL----SELSKDGNM-RNIESQLNRLARKKVRIVFDDVTS------ 261
           E   +  +K LQ++LL     + +K G++   I     RL  KK  ++ DDV        
Sbjct: 257 ENSASNKLKHLQEELLLKTLQQKTKLGSVSEGIPYIKERLHTKKTLLILDDVDDMKQLHA 316

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L++      + +K L   +A +L    AF  + + +S
Sbjct: 317 LAGGPDWFGRGSRVIITTRDKHLLRSHGIKSTHEVKGLYGTEALELLRWMAFKNNKVPSS 376

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++ ++A+ YA G+PL L+++G  L G++ E W+  +   E IP+ +I E+LK+SYD+L
Sbjct: 377 YEDVLNRAVSYASGLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEILKVSYDAL 436

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLD------LFY 411
           ++ Q++VFLDIAC  +G    E   I                A KSL+ +          
Sbjct: 437 EEEQQSVFLDIACCFKGCGWKEFEDILRAHYGHCIKHHLGVLAEKSLVKISSTSYSGSIN 496

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            + +HD + DMG+E+VR+ES   PG+R+RLW   DI  VLK+NTGT  IE I ++     
Sbjct: 497 HVTLHDFIEDMGKEVVRQESPKEPGERSRLWCQDDIVNVLKENTGTRKIEMIYMNFPSEE 556

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
             I     AF KM +L+ L             +E V F+  + L++    L+ L      
Sbjct: 557 FVIDKKGKAFKKMTRLKTLI------------IENVHFS--KGLKYLPSSLRVL------ 596

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
                    K+     +     S    F+      +  C+ L  +PD   L+NLE  + +
Sbjct: 597 ---------KLRGCLSESLLSCSLSKKFQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFE 647

Query: 590 -GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
               +  +  S+G L+ ++RL  +  S LER P     L+ L  L IS+CE L++ P+L 
Sbjct: 648 YCENLITIHNSIGHLNKLERLSANGCSKLERFPP--LGLASLNELNISYCESLKSFPKLL 705

Query: 649 CNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKL 686
           C +  +       TS+ +LP+   +++ +  + L  C  L+ 
Sbjct: 706 CKMTNMKTIWLQKTSIRELPSSFQNLNELFQLTLWECGMLRF 747



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 97/260 (37%), Gaps = 62/260 (23%)

Query: 522 LKTLNIC-AEKLVSL-KMPC--TKVEQLW---DDVQRLPSSLCTFKTPITFEIIDCKMLE 574
           L  LNI   E L S  K+ C  T ++ +W     ++ LPSS           + +C ML 
Sbjct: 687 LNELNISYCESLKSFPKLLCKMTNMKTIWLQKTSIRELPSSFQNLNELFQLTLWECGML- 745

Query: 575 RLP---DELENLEYLTVKGTTIRE-------LPESLGRLSWVKRLILSNNSNLERIPESI 624
           R P   D++ ++ +  V    +         LP  L     VK L LS N N + IPE +
Sbjct: 746 RFPKQNDQMYSIVFSKVTNLVLNNCKLSDECLPIFLKWCVNVKLLDLSRN-NFKLIPECL 804

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
                L  L + +C+ L+ +  +  NL  LSA  C SL      +     +         
Sbjct: 805 SECHLLNNLILDNCKSLEEIRGIAPNLERLSAMGCKSLSSSSRRMLLSQKL--------- 855

Query: 685 KLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG--NEIPKWFRHQSMGSSATLKTRPPR 742
               NE   I+                    FP   + IP WF HQS G + +   R   
Sbjct: 856 ----NEAGCIIS-------------------FPNFSDGIPDWFEHQSRGDTISFWFRKKI 892

Query: 743 PAGYNKLISFAFCAVVVFPA 762
           P+           +V++FP 
Sbjct: 893 PSN---------ISVILFPG 903


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 256/769 (33%), Positives = 398/769 (51%), Gaps = 109/769 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR  FT HL+  L    I TF DD QL  G  IS+ L   IE S I++I
Sbjct: 23  YEVFLSFRGFDTRKGFTDHLYKALIRNGIHTFRDDEQLKSGKPISKELFKAIEESKISVI 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHS-FGRHFSRLRKR 98
           I S  YA+S W                      FY V PS VR+Q+   F   F++  K 
Sbjct: 83  ILSTNYATSTWCLDELAKMVELANNESRSILPVFYNVTPSEVREQTGDHFQEAFAQHDKD 142

Query: 99  F---PEKMKRWKNALTEAADLS--GFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KG 152
           F   P K+ RWKN+LT  A+L   GFD    R E+ +IE+I   +   L  TF + + K 
Sbjct: 143 FEGEPGKVARWKNSLTAIAELEAEGFDLTNFRYETDMIEKIVERIFGVLIKTFSNDDLKD 202

Query: 153 LVGVECSIEEIES--LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
            VG++  + EI+S   LC+GSE V  + I G+ GI K T+A A+  +I   F+   F   
Sbjct: 203 FVGMD-RVNEIKSKMSLCMGSEEVRVIGICGMPGIGKSTVAKALSQRIHSQFDAISFISK 261

Query: 211 VREAEETGGIKDLQKKLLSEL-SKDGNMRNIESQL-NRLARKKVRIVFDDVTS------- 261
           V E  +  G+  ++K+L   L  K    ++++  +  RL  K+V I+ D+V         
Sbjct: 262 VGEISKKKGLFHIKKQLCDHLLDKKVTTKDVDDVICKRLRDKRVLIILDNVDELEQIEAV 321

Query: 262 --------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                         GSR+I+TT D+++L + +  + Y +++L    A  LFC+ A   DH
Sbjct: 322 AGSDGAGLSNRFGKGSRIIVTTTDERLLID-YNPEIYTIEKLTPDQALLLFCRKALKTDH 380

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV---EIEEVL 364
              +  +L+++ + Y  G PLAL+V G  L  R ++ W + ++ L+   +    +I  VL
Sbjct: 381 PTDAFKKLSNEFVDYIDGHPLALEVFGHSLWKREEDYWSTKLKSLKDKGYSGEKKIIGVL 440

Query: 365 KISYDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLF 410
           K S+D L++  Q+++FLD ACF +GE    +  IF++              KSL+++ + 
Sbjct: 441 KASFDGLENQEQQDMFLDTACFFKGEDVCRLEKIFESCGYYPGINITILCEKSLVSI-VG 499

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
            R+ MHDLL+ MGR +V  ES    G+R+RLWHH D   VLKKN GT+A++GI L   + 
Sbjct: 500 GRLWMHDLLQKMGRGLVLGES-KKEGERSRLWHHTDALPVLKKNKGTDAVQGIFLSSPQP 558

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           ++ +H+    FS M  LR L+ Y  +    + +L      E+  LEW +CPLK+L  +  
Sbjct: 559 DK-VHLKKDPFSNMDNLRLLKIYNVEFSGSLEYLSD----ELSLLEWHKCPLKSLPSSFE 613

Query: 529 AEKLVSLKM--------------PCTKVEQL-WDDVQRLPSSLCTFKTPITFEII--DCK 571
            +KLV L +              P  K+  L   D Q+L  +    K P   ++I   C 
Sbjct: 614 PDKLVELNLSESEIEELWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILKGCT 673

Query: 572 MLERLPDELENLEYLT---VKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            L  +PD++ NL  LT   + G + +++LPE    +  +++L L + + +E +P SI+HL
Sbjct: 674 SLSAVPDDI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHL-DGTAIEELPTSIKHL 731

Query: 628 SKLTFLFISHCERLQTLPELPC----NLGLLSARNCTSLEKLPAGLSSM 672
           + L  L +  C+ L +LP++ C    +L +L+   C++L +LP  L S+
Sbjct: 732 TGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSL 780



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 144/322 (44%), Gaps = 39/322 (12%)

Query: 463  ISLDMNKVNREIHMNSYAFSKMPK-------LRFLRFYGDKNKCMVSHLEGVPFAEVRHL 515
            I  DM ++ R++H++  A  ++P        L  L     KN   +  +       ++ L
Sbjct: 704  IGEDMKQL-RKLHLDGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQIL 762

Query: 516  EWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDD---VQRLPSSLCTFKTPITFEIIDCKM 572
                C    LN   E L SL+     +++L+     +Q LP+S+          + +CK 
Sbjct: 763  NVSGC--SNLNELPENLGSLEC----LQELYASRTAIQELPTSIKHLTDLTLLNLRECKN 816

Query: 573  LERLPD----ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            L  LPD     L +L+ L + G + + ELPE+LG L  ++ L  S  + + +IPESI  L
Sbjct: 817  LLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLECLQELYASGTA-ISQIPESISQL 875

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            S+L  L +  C +LQ+LP LP ++  +S  NC  L+      S+  +V       F  L+
Sbjct: 876  SQLGELVLDGCSKLQSLPRLPFSIRAVSVHNCPLLQ---GAHSNKITVWPSAAAGFSFLN 932

Query: 688  PNELSEIVKDGWM--KHSLYE------ERGIKKSMYFP----GNEIPKWFRHQSMGSSAT 735
                 +I +  W+  KH L+       E  I++   F      NEIP W   +S  S+ T
Sbjct: 933  RQRHDDIAQAFWLPDKHLLWPFYQTFFEDAIRRDERFEYGYRSNEIPAWLSRRSTESTIT 992

Query: 736  LKTRPPRPAGYNKLISFAFCAV 757
            +   P    G +K I  A C +
Sbjct: 993  IPL-PHDVDGKSKWIKLALCFI 1013


>gi|357500105|ref|XP_003620341.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495356|gb|AES76559.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1047

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 245/763 (32%), Positives = 388/763 (50%), Gaps = 112/763 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K IKTFIDD  L RGD I+ SL   I+ S I I 
Sbjct: 18  YQVFLSFRGIDTRHGFTGNLYKALTDKGIKTFIDDNDLQRGDEITPSLRKAIDESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      F+ V+P++VR    S+G   +   KRF
Sbjct: 78  VFSIFYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTNVRHLKGSYGEALAEHEKRF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++ +WK ALT+AA+LSG+ S+    E K I EI  ++  ++           
Sbjct: 138 QNDKNNMERLHQWKLALTQAANLSGYHSSH-GYEYKFIGEIVKNISNKISHQPLHVANYP 196

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  ++ ++SLL  GS+ G   + ++G GG+ K T+  A++N I+  FE S F  NVR
Sbjct: 197 VGLQSRVQHVKSLLDEGSDHGAHMVGLYGTGGLGKSTLGKAIYNFIADEFECSCFLENVR 256

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E   +  +K LQ++LL      E+   G    I     RL  KK+ ++ DDV        
Sbjct: 257 ENSASNKLKHLQEELLLKTLQLEIKLGGVSEGISHIKERLHSKKILLILDDVDDMEQLQA 316

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L++      + ++ L   +A +L    AF  + + +S
Sbjct: 317 LAGEPDWFGLGSRVIITTRDKHLLRSHGIESTHEVEGLYGTEALELLRWMAFKNNKVPSS 376

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++ ++A+ YA G+PL L+++G  L G++ E W+  +   E IP+ +I E+LK+SYD+L
Sbjct: 377 YEDVLNRAVSYASGLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEILKVSYDAL 436

Query: 372 DDSQKNVFLDIACFLEG--------------EHRDEVISIFDASKSLINLD-----LFYR 412
           ++ Q++VFLDIAC  +G               HR     +  A KSL+ +          
Sbjct: 437 EEEQQSVFLDIACCFKGCGWKEFEYILRAHYGHRITHHLVVLAEKSLVKITHPHYGSINE 496

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + +HDL+++MG+E+VR+ES   PG+R+RLW   DI  VLK+NTGT  IE I ++      
Sbjct: 497 LTLHDLIKEMGKEVVRQESPKEPGERSRLWCEDDIVNVLKENTGTSKIEMIYMNFPSEEF 556

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE-VRHLEWPQCPLKTLNICAEK 531
            I     AF KM +L+ L             +E V F++ +++L      LK     +E 
Sbjct: 557 VIDKKGKAFKKMTRLKTLI------------IENVHFSKGLKYLPSSLRVLKLRGCLSES 604

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           L+S    C+  ++              F+      +  C+ L  +PD   L+NLE  + +
Sbjct: 605 LIS----CSLSKK--------------FQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFE 646

Query: 590 -GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
               +  +  S+G L+ ++RL  +  S LER P     L+ L  L IS+CE L++ P+L 
Sbjct: 647 YCENLITIHNSIGHLNKLERLSANGCSKLERFPP--LGLASLNELNISYCESLKSFPKLL 704

Query: 649 C---NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKL 686
           C   N+ ++  +  TS+ +LP+   +++ +  + L  C  L+ 
Sbjct: 705 CKMTNMKMIWLQK-TSIRELPSSFQNLNELFLLTLWECGMLRF 746



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 98/252 (38%), Gaps = 49/252 (19%)

Query: 522 LKTLNIC-AEKLVSL-KMPC--TKVEQLW---DDVQRLPSSLCTFKTPITFEIIDCKMLE 574
           L  LNI   E L S  K+ C  T ++ +W     ++ LPSS           + +C ML 
Sbjct: 686 LNELNISYCESLKSFPKLLCKMTNMKMIWLQKTSIRELPSSFQNLNELFLLTLWECGML- 744

Query: 575 RLP---DELENLEYLTVKGTTIRE-------LPESLGRLSWVKRLILSNNSNLERIPESI 624
           R P   D++ ++ +  V    + +       LP  L     V  L LS N N + IPE +
Sbjct: 745 RFPKQNDQMYSIVFSKVTNLILHDCKLSDECLPIFLKWCVNVTSLDLSYN-NFKLIPECL 803

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
                L  L + +C+ L+ +  +P NL +LSA  C SL      +      L+   C   
Sbjct: 804 SECHLLNILILDNCKSLEEIRGIPPNLEMLSAMGCKSLSSSSRRMLLSQK-LHEAGCILF 862

Query: 685 KLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
           +  PN       DG                      IP WF HQS G + +   R   P+
Sbjct: 863 RF-PN-----FSDG----------------------IPDWFEHQSRGDTISFWFRKKIPS 894

Query: 745 GYNKLISFAFCA 756
             + +I F  C 
Sbjct: 895 NIS-IILFPGCT 905


>gi|356561381|ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 873

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 253/735 (34%), Positives = 376/735 (51%), Gaps = 110/735 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT HL+  L  + I TFID ++L RG+ I+ SL+  IE S IAI+
Sbjct: 12  YDVFLSFRGSDTRHGFTGHLYKALLDRGIYTFIDNEELQRGEEITPSLVKAIEDSRIAIL 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY VDPS VR Q  S+    ++ +++F
Sbjct: 72  VFSKNYASSTFCLDELVHILACVKEKGTMVLPVFYEVDPSDVRHQRGSYEEALNKHKEKF 131

Query: 100 ---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK+++W+ AL +AA+LSG+   +    E   + +I  +V +R+  T       LVG
Sbjct: 132 NDDEEKLQKWRIALRQAANLSGYHFKHGNENEYDFVGKIIKEVSQRISRTHLHVANNLVG 191

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  +  + SLL    +GV  + I GIGG+ K TIA  V+N I+  FE   F  NVRE  
Sbjct: 192 LESRVLHVTSLLDDKYDGVLMVGIHGIGGVGKTTIAREVYNLIADQFEWLCFLDNVRENS 251

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARK------------------KVRIV 255
              G+  LQK LLS+   + +++  ++   +  +  +                     IV
Sbjct: 252 IKHGLVHLQKTLLSKTIGESSIKLGSVHEGIPIIKHRFLLKKVLLVVDDVDDLDQLQAIV 311

Query: 256 --FDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
              D   S SRVIITTRDK +L        Y +  L   +A KL    AF  D +D  ++
Sbjct: 312 GGTDWFGSASRVIITTRDKHLLTCHGVTSTYEVDGLNKEEALKLLSGTAFKIDKVDPCYM 371

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            + ++ + YA G+PLAL V+G  L G+S E WES++ + E IP+ +I++VLK+S+DSL++
Sbjct: 372 RILNRVVTYASGLPLALMVIGSNLFGKSIEEWESSIDQYERIPNKKIQDVLKVSFDSLEE 431

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLL 419
            ++ +FLDIAC  +G     V  I                  KSLI +D   R+ +HDL+
Sbjct: 432 DEQQIFLDIACCFKGYALTYVKEILSTHHNFCPEYAIGVLIDKSLIKVDA-DRVILHDLI 490

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            DMG+EIVR+ES   PGKR+RLW   DI +VL++N G   I+ I+LD  K    +  +  
Sbjct: 491 EDMGKEIVRQESPREPGKRSRLWFPDDIVEVLEENKGISRIQMITLDYLKYEAAVEWDGV 550

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAEKLVSLKM 537
           AF +M  L+ L     ++ C+      +P + +R LEW   P  +L I    +KLV LK 
Sbjct: 551 AFKEMNNLKTLII---RSGCLHEGPIHLPNS-LRVLEWKVYPSPSLPIDFNPKKLVILKF 606

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIR 594
           P + +  L  DV  L S   ++          C  LE  P+   ++EN+  L + GT I+
Sbjct: 607 PYSCLMSL--DV--LKSKKLSY----------CHSLESFPEVLGKMENVTSLDIYGTVIK 652

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP S+  L+ ++RL            E +R            CE L+ +  +P NL   
Sbjct: 653 ELPFSIQNLTRLRRL------------ELVR------------CENLEQIRGVPPNLETF 688

Query: 655 SARNCTSLEKLPAGL 669
           S ++C+SL+ L   L
Sbjct: 689 SVKDCSSLKDLDLTL 703


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 240/781 (30%), Positives = 389/781 (49%), Gaps = 137/781 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+ F  HL+  L+ K I TF DD+ L +G++IS  LL  I+ S ++II
Sbjct: 13  YDVFISFRGPDTRNTFVDHLYAHLTRKGISTFKDDKSLQKGESISLQLLQAIKDSRVSII 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF---SRLR 96
           +FS+ YASS W                      FY +DPSHVRK+S ++   F   + L 
Sbjct: 73  VFSKDYASSTWCLDEMAAIDESSRRLKLVVFPVFYDIDPSHVRKRSGAYEDAFVLHNELF 132

Query: 97  KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
           K  P+++ +W+ A+T  A  +G+D    +PE   IE+I   V+K+L   F      L+G+
Sbjct: 133 KHDPDRVAQWRRAMTSLAGSAGWDVRN-KPEFDEIEKIVEAVIKKLGHKFSRSADDLIGI 191

Query: 157 ECSIEEIESLLCIGSE--GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +  IE +ES L + S   G   L IWG+GGI K T+A  ++++IS  F+   +  NV + 
Sbjct: 192 QPPIEALESRLKLSSRNGGFQVLGIWGMGGIGKTTLATVLYDRISYQFDTRCYIENVHKI 251

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQL--------------NRLARKKVRIVFDDVT 260
            E GG   +QK++L         R IE ++              +RL  KK+ +V D+V 
Sbjct: 252 YEEGGANAVQKEILR--------RTIEEKILDTYSPPEIARIVRDRLQNKKLLVVLDNVD 303

Query: 261 S----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG 304
                             SR+II TRD+ +L+ C A+  Y ++ +               
Sbjct: 304 QIEQLDELDIKRVFLRPESRLIIITRDQHILRACGADIVYEVELMN-------------- 349

Query: 305 GDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
                    EL  + +KY QG+PLA++V+G +L  R+ + W +A+ +L+  P  +I +VL
Sbjct: 350 ---------ELIPEVLKYTQGLPLAIRVIGSFLHSRNAKQWRAALDRLQNSPPDKILKVL 400

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFY 411
           ++SY+ L++  K +FL +ACF +GE +D V  I D             A KS+I +    
Sbjct: 401 QVSYEGLEEEDKEIFLHVACFFKGERKDYVSRILDACGLHPDIGIPLLAEKSVITIK-NE 459

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
            I MH++L+++G++IVR E  + PG  +RLW ++D + V+   T  +AIE  ++ +N+  
Sbjct: 460 EIHMHEMLQELGKKIVRGEHPDEPGFWSRLWLYRDFHHVMM--TQKKAIEAKAIVLNQKE 517

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVP---FAEVRHLEWPQCPLKTL--N 526
            +   N      + KL  L+     +K    +  G P      +R+L W   P  +L  N
Sbjct: 518 DDFKFNELRAEDLSKLEHLKLLILNHK----NFSGRPSFLSNSLRYLLWNDYPFISLPSN 573

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLE 584
                LV L +P + VEQLW D+Q++P            ++ + K L+  P    ++NLE
Sbjct: 574 FQPYHLVELNLPGSSVEQLWTDIQQMPYLK-------RMDLSNSKNLKMTPCFKGMQNLE 626

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL-----ERIPESIRHLSKLTFLFISHC 638
            L   G  ++  +  S+G L  ++ L L N ++L      R+ ES    S L  L +S C
Sbjct: 627 RLDFAGCISLWHVHPSIGLLRELQFLSLQNCTSLVCFEFGRVSES----SSLRVLCLSGC 682

Query: 639 ERLQTLPELP--CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
            +L+  P+     NL  L    CTSL K+   +  ++ + +++L  C  L + P+  + +
Sbjct: 683 TKLENTPDFEKLLNLEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNM 742

Query: 695 V 695
            
Sbjct: 743 T 743



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLP-------DELENLEYLTVKGTTIRELPESLGRLS 604
           +P S       +T ++  C     LP          ++L  L +    I  +P+++G L 
Sbjct: 735 IPDSFNNMTNLMTLDLCGCSRFTNLPLGSVSSFHTQQSLISLDLSFCNISIVPDAIGELR 794

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            ++RL L  N N   +P +I+ LS L +L +SHC RLQ  P +P
Sbjct: 795 GLERLNLQGN-NFTELPCTIQRLSSLAYLNLSHCHRLQIWPLIP 837


>gi|358348487|ref|XP_003638277.1| Cellulose synthase, partial [Medicago truncatula]
 gi|355504212|gb|AES85415.1| Cellulose synthase, partial [Medicago truncatula]
          Length = 1681

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 228/718 (31%), Positives = 363/718 (50%), Gaps = 89/718 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF++FR +DT  +F SHL+ VL    IK    DQL  G  +   L   I+ S ++I+
Sbjct: 121 IYDVFINFRSKDTGKSFVSHLYAVLKKARIKHIDIDQLHDGVLLESELFEAIKMSRMSIL 180

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ Y  S W                      FY V PS VR Q   FG+      KR 
Sbjct: 181 VFSKNYTESSWCLDELQRVMECRRTHGQMVVPLFYDVTPSDVRYQKGHFGKKLRAAAKRI 240

Query: 100 PEKMKR------WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT--FQSKNK 151
             K  R      W+ AL+EAA++SG+D++  R E++L+ +I  DVL++L  +    S  +
Sbjct: 241 SGKGMREHVVSGWRVALSEAANISGWDASNFRNEAELLRKIIEDVLRKLKGSRRLLSIPE 300

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
             VG++  ++E   ++   S  VC + IWG+GG  K T A A++N+I   F   +F  N+
Sbjct: 301 FPVGLDTHVQEAIQIIENQSNNVCSMGIWGMGGSGKTTTAKAIYNQIYHTFLYHHFIANI 360

Query: 212 REAEETG--GIKDLQKKLLSE-LSKDGNMRNIESQL----NRLARKKVRIVFDDVT---- 260
           R+  E G  GI  LQ++LL+  L  +  + N  S +    +RL+  K  IV DDV+    
Sbjct: 361 RQVCERGDEGIIHLQEQLLANVLGFNEKIYNTASGITTIEDRLSGIKALIVLDDVSTLEQ 420

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       SGS +I+T+RD ++L+      +  MKE+V   + +LFC  AF     
Sbjct: 421 AEALCGNSKWFGSGSVLIVTSRDTRILRLLEVKYRLTMKEMVEGKSLELFCWHAFRQPSP 480

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
                EL+   + Y  G+PLAL+++G  L  R+K+ W S + K E IPH  ++++LKISY
Sbjct: 481 IEDFSELSRSVVAYCGGLPLALEIIGSMLHYRTKQEWRSVLSKFEKIPHYLMQQILKISY 540

Query: 369 DSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           D L DD  K VFLDI CF  GE +  V  I +               +SL+ ++    + 
Sbjct: 541 DGLMDDMVKAVFLDICCFFIGEDKAYVTEILNGCGLCADIGIAVLIERSLLKVEDNNTLG 600

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH L+RDMGREIVR+ S   PG+R+RLW H DI+ VL +NTG + +EG+ L   +  R +
Sbjct: 601 MHKLIRDMGREIVRESSAKEPGERSRLWFHDDIHDVLTENTGRKNVEGLVLKSQRTGR-V 659

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
             ++ +F +M  LR L+     ++  ++   G    E+R + W       +  +     L
Sbjct: 660 CFSTESFKRMKDLRLLKL----DRVDLTGDYGYLSKELRWVHWKGFTFNYIPDDFHQGNL 715

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK---MLERLPD--ELENLEYLT 587
           V  ++  + ++ +W++ + L          +  +I++      LE  PD  +L NLE L 
Sbjct: 716 VVFELTHSNIKHVWNETKVL----------VNLKILNLSHSIYLESSPDFSKLPNLEKLI 765

Query: 588 VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           +     + E+  S+G L+ +  + L N  +L + P++I  L  L  L +  C ++ +L
Sbjct: 766 MNDCPCLSEIHPSIGDLNNIHLINLKNCISLSKFPKNIFKLKSLKTLILLGCTKIGSL 823


>gi|334183667|ref|NP_001185325.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196312|gb|AEE34433.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1051

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 239/746 (32%), Positives = 387/746 (51%), Gaps = 92/746 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R  F SH+H     K I  FID+++ RG++I   ++  I  S IAI++
Sbjct: 48  HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAIRESKIAIVL 107

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
            S  YASS W                      FYRVDPS V+K + +FG  F +    + 
Sbjct: 108 LSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKT 167

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E +++W+ AL +    +G+DS     E+ +IE IA D+   L+ +  S++  GL+G+  
Sbjct: 168 NEVIRKWRQALAKMGTTTGYDSRNWDNEATMIENIATDISNMLNYSTPSRDFDGLIGMRA 227

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            ++ +E +LC+ S+ V  + IWG  GI K TIA  +F++ S  FE S F  NV+E     
Sbjct: 228 HMKVMEPMLCLHSDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTR 287

Query: 214 ---AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
              ++E      LQK+ +S++   KD  + ++    +RL  KKV IV D++         
Sbjct: 288 PVCSDEYSAKLHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAI 347

Query: 262 ---------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    GSR+IITT+D+++LK +   N  Y +      +A ++FC +AFG       
Sbjct: 348 AKESRWFGHGSRIIITTQDRKLLKAHDGINHIYNVNFPSAYEACQIFCMYAFGQKFPKDG 407

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             EL  +  K   G+PL L+V+G +  G SK  W +A+ +L       I+ +LK SY++L
Sbjct: 408 FEELAWEVAKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDANIQSILKFSYNAL 467

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDL 418
            +  K++FL IAC    +  ++V                    KSLI+++   RI+MH+L
Sbjct: 468 CEEDKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIE-GGRIKMHNL 526

Query: 419 LRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           L  +G+EIVR     + I  PGKR  L   +DI ++L  +TG++++ GI    ++++ E+
Sbjct: 527 LEQLGKEIVRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSEL 586

Query: 475 HMNSYAFSKMPKLRFLRF---YGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           +++  AF  MP L+FLRF   YGD+ +K  +         +++ LEW   PL  +  N C
Sbjct: 587 NISERAFEGMPNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNFC 646

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL-EY 585
            E LV L M  +K+ +LW+  + L +    +       +   K+L+ LPD     NL E 
Sbjct: 647 TEYLVELNMRFSKLHKLWEGNRPLANLNWMY-------LNHSKILKELPDLSTATNLQEL 699

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             VK +++ ELP S+G+ + +++L L+  ++L  +P SI +L KL  L ++ C +L+   
Sbjct: 700 FLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEV-- 757

Query: 646 ELPCNLGL-----LSARNCTSLEKLP 666
            LP N+ L     L   +C  L++ P
Sbjct: 758 -LPANINLESLDELDLTDCLVLKRFP 782



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 42/218 (19%)

Query: 565 FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL------- 617
            ++ DC +L+R P+   N++ L +  TTI+E+P S+     ++ L LS N NL       
Sbjct: 770 LDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMHAL 829

Query: 618 -------------ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
                        + IP  ++ +S+L  L ++ C++L +LP+LP +L  L   NC SLE+
Sbjct: 830 DIITTMYFNDIEMQEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLER 889

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
           L     +    + +   N LKL+      I++               K    PG E+P +
Sbjct: 890 LDCSFHNPK--MSLGFINCLKLNKEAKELIIQI------------TTKCTVLPGREVPVY 935

Query: 725 FRHQSMGSSA---TLKTRPPRPAGYNKLISFAFCAVVV 759
           F H++   S+    L  RP   A       F  C ++V
Sbjct: 936 FTHRTKNGSSLRVNLNRRPLSTAS-----RFKACILLV 968


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 244/792 (30%), Positives = 387/792 (48%), Gaps = 120/792 (15%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
            Y VF+SFRG DTR++F  HL+  L+ K I  F DD+ L +G+ IS  LL  I  S I I+
Sbjct: 257  YGVFISFRGPDTRNSFVDHLYAHLTRKGIFAFKDDKSLEKGEFISPQLLQAIRNSRIFIV 316

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS+ YA S W                      FY VDPS VRKQS  +   F   +K+F
Sbjct: 317  VFSKTYAESTWCLEEMAAIADCCEYFKQTVFPIFYDVDPSDVRKQSGVYQNDFVLHKKKF 376

Query: 100  ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               P+K+ RW  A+   A+L G+D    +PE + IE I  +V+K L   F      L+  
Sbjct: 377  TRDPDKVVRWTKAMGRLAELVGWDVRN-KPEFREIENIVQEVIKTLGHKFSGFADDLIAT 435

Query: 157  ECSIEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            +  +EE+ESLL + S+   +  + IWG+ GI K T+A  ++++IS  F+ S F  NV + 
Sbjct: 436  QPRVEELESLLKLSSDDDELRVVGIWGMAGIGKTTLASVLYDRISSQFDASCFIENVSKI 495

Query: 215  EETGGIKDLQKKLLSELSKDGNMRNIE-SQLN-----RLARKKVRIVFDDVT-------- 260
               GG   LQK++L +   +  +     S+++     RL  +K  +V D+V         
Sbjct: 496  YRDGGAVSLQKQILRQTIDEKYLETYSPSEISGIVRKRLCNRKFLVVLDNVDLLEQVEEL 555

Query: 261  --------SGSRVIITTRDKQVLK-----------NCWANKKYRMKELVYADAHKLFCQW 301
                     GSR+IITTR+  +L+            C +   Y +  L   DA +LF + 
Sbjct: 556  AINPELVGKGSRMIITTRNMHILRVYGEQLSLSHGTCVS---YEVPLLNNNDARELFYRK 612

Query: 302  AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIE 361
            AF      +  + LT + +KY +G+PLA++V+G +LC R+   W  A+ +L   P  ++ 
Sbjct: 613  AFKSKDPASECLNLTPEVLKYVEGLPLAIRVVGSFLCTRNANQWRDALYRLRNNPDNKVM 672

Query: 362  EVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLF--- 410
            + L++ ++ L    + +FL IACF +GE  + V  I DA         + LI   L    
Sbjct: 673  DALQVCFEGLHSEDREIFLHIACFFKGEKEEYVKRILDACGLHPHLGIQGLIESSLITIR 732

Query: 411  -YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK 469
               I MH++L+++G++IVR++    PG  +RLW ++D   V+   TGT+ ++ I LD  +
Sbjct: 733  NQEIHMHEMLQELGKKIVRQQFPEEPGSWSRLWLYEDFNPVMMTETGTDKVKAIILDKKE 792

Query: 470  -VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
             ++    + +   S M  L+ L  Y       ++ L       +++L W   P  +L + 
Sbjct: 793  DISEYPLLKAEGLSIMRGLKILILYHTNFSGSLNFLSN----SLQYLLWYGYPFASLPLN 848

Query: 529  AE--KLVSLKMPCTKVEQLWDDVQRLP--------SSLCTFKTPITFEIIDCKMLERLP- 577
             E  +LV L MPC+ +++LWD  + LP        +S C  +TP        +++ERL  
Sbjct: 849  FEPLRLVELNMPCSLIKRLWDGHKNLPCLKRVDLSNSRCLVETP---NFTGSQIIERLDF 905

Query: 578  -------------DELENLEYLTVKGT------TIRELPESLGRLSWVKRLILSNNSNLE 618
                           L+ L +L+++G        +   P S   L  +K L LS  S LE
Sbjct: 906  TGCINLSYVHPSIGLLKELAFLSLEGCRNLVSLVLDGHPAS--NLYSLKVLHLSGCSKLE 963

Query: 619  RIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMSSV 675
             I    R +S L +L I  C  L T+ +   +L     LS R CTSL  +P  ++SM+S+
Sbjct: 964  -IVSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSL 1022

Query: 676  LYVNLCNFLKLD 687
              ++LC   KL+
Sbjct: 1023 ETLDLCGCFKLE 1034



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 55/317 (17%)

Query: 476  MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC-PLKTLNICAEKLVS 534
            ++ +  S +  L+ L   G     +VS   GV  + + +L+  QC  L T+N     L  
Sbjct: 940  LDGHPASNLYSLKVLHLSGCSKLEIVSDFRGV--SNLEYLDIDQCVSLSTINQSIGDLTQ 997

Query: 535  LKM----PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP------------- 577
            LK      CT +  +       P S+ +  +  T ++  C  LE LP             
Sbjct: 998  LKFLSFRECTSLASI-------PESINSMTSLETLDLCGCFKLESLPLLGNTSVSEINVD 1050

Query: 578  ---DEL------ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
               DEL       +L +L +    +  +P ++G L  ++RL L  N NL  +P S+  LS
Sbjct: 1051 LSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGELRHLERLNLEGN-NLISLPSSVGGLS 1109

Query: 629  KLTFLFISHCERLQTLPELP-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
             L +L ++HC RLQ+LPEL  C       R      K+ +G  +  S LY+  C  LK+ 
Sbjct: 1110 SLAYLNLAHCSRLQSLPELQLCATSSYGGR----YFKMVSGSHNHRSGLYIFNCPHLKMT 1165

Query: 688  PNELSEIVKDGWMKHSLYEERGIKKSM--YFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
               L   V   W+K+ +      +  +    P + IP WF HQ  G+S        +   
Sbjct: 1166 GQSLDLAVL--WLKNLVKNPCHFRCGLDIVVPSDTIPLWFDHQFAGNSRV------KITD 1217

Query: 746  YNKL---ISFAFCAVVV 759
            YNK    + FAFC   V
Sbjct: 1218 YNKFDNWLGFAFCVAFV 1234


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 242/766 (31%), Positives = 385/766 (50%), Gaps = 84/766 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R +F SH+      K I TFID+ + R  +I   L+  I+ S IA+++
Sbjct: 56  HDVFPSFHGADVRKSFLSHILKEFKRKGIDTFIDNNIERSKSIGPELIEAIKGSKIAVVL 115

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDP+ V+KQ+  FG+ F +    + 
Sbjct: 116 LSKDYASSSWCLNELVEIMKCRKMLDQTVMTIFYEVDPTDVKKQTGDFGKVFKKTCMGKT 175

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
               ++W  AL+E A ++G  S     E+ +IE+I+ D+  +L+ +   ++  GLVG+  
Sbjct: 176 NAVSRKWIEALSEVATIAGEHSINWDTEAAMIEKISTDISNKLNNSTPLRDFDGLVGMGA 235

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E++E LLC+ S  V  + IWG  GI K TI   ++N++S  FE S F  N++      
Sbjct: 236 HMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMHTIL 295

Query: 219 GIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTSG------- 262
              D       LQ++ LS++   KD  + ++     RL  KKV +V DDV          
Sbjct: 296 ASSDDYSAKLILQRQFLSKILDHKDIEIPHLRVLQERLYNKKVLVVLDDVDQSVQLDALA 355

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR++ITT+D+++LK    N  Y++      DA ++FC +AFG         
Sbjct: 356 KETRWFGPRSRILITTQDRKLLKAHRINNIYKVDLPNSDDALQIFCMYAFGQKTPYDGFY 415

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L  K        PL L+V+G Y    SK+ W   + +L      +IE VLK SYD+L D
Sbjct: 416 KLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESVLKFSYDALCD 475

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
             K++FL IACF   E  +++                  A KSLI+++  + + MHD L 
Sbjct: 476 EDKDLFLHIACFFNHESIEKLEDFLGKTFLDIAQRFHVLAEKSLISINSNF-VEMHDSLA 534

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSY 479
            +G+EIVRK+S+  PG+R  L   +DI +VL  +T G  ++ GI LD+++ +   +++  
Sbjct: 535 QLGKEIVRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLDLHRNDDVFNISEK 594

Query: 480 AFSKMPKLRFLRF--YGDKNKCMV--SHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           AF  M  L+FLR   +G+    +V   H       ++R L+W   P+         E LV
Sbjct: 595 AFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYISRKLRLLDWMYFPMTCFPSKFNPEFLV 654

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L M  +K+E+LW+++Q L       +     ++   K L+ LPD     NLE L + G 
Sbjct: 655 ELNMWGSKLEKLWEEIQPL-------RNLKRMDLFSSKNLKELPDLSSATNLEVLNLNGC 707

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--- 647
           +++ ELP S+G  + + +L LS  S+L  +P SI +   L  +  SHCE L  LP     
Sbjct: 708 SSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGN 767

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNEL 691
             NL  L    C+SL++LP+ + + +++  L++  C+ LK  P+ +
Sbjct: 768 ATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSI 813



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT----VKGTTIRELPESLGR 602
           +++  LPSS+         ++  C  L+ LP  + N   L     +  ++++ELP S+G 
Sbjct: 756 ENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGN 815

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNC 659
            + +K L L+  S+L ++P SI +   L  L ++ CE L  LP       NL +L+    
Sbjct: 816 CTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYL 875

Query: 660 TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           + L +LP+ + ++  +  + L  C  L++ P  ++
Sbjct: 876 SCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNIN 910


>gi|22330441|ref|NP_176760.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6227009|gb|AAF06045.1|AC009513_1 Strong similarity to gb|AF098963 disease resistance protein
           RPP1-WsB from Arabidopsis thaliana and contains 2
           PF|00931 NB-ARC domains and 5 PF|00560 Leucine Rich
           Repeats [Arabidopsis thaliana]
 gi|332196311|gb|AEE34432.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1036

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 239/746 (32%), Positives = 387/746 (51%), Gaps = 92/746 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R  F SH+H     K I  FID+++ RG++I   ++  I  S IAI++
Sbjct: 33  HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAIRESKIAIVL 92

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
            S  YASS W                      FYRVDPS V+K + +FG  F +    + 
Sbjct: 93  LSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKT 152

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E +++W+ AL +    +G+DS     E+ +IE IA D+   L+ +  S++  GL+G+  
Sbjct: 153 NEVIRKWRQALAKMGTTTGYDSRNWDNEATMIENIATDISNMLNYSTPSRDFDGLIGMRA 212

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            ++ +E +LC+ S+ V  + IWG  GI K TIA  +F++ S  FE S F  NV+E     
Sbjct: 213 HMKVMEPMLCLHSDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTR 272

Query: 214 ---AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
              ++E      LQK+ +S++   KD  + ++    +RL  KKV IV D++         
Sbjct: 273 PVCSDEYSAKLHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAI 332

Query: 262 ---------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    GSR+IITT+D+++LK +   N  Y +      +A ++FC +AFG       
Sbjct: 333 AKESRWFGHGSRIIITTQDRKLLKAHDGINHIYNVNFPSAYEACQIFCMYAFGQKFPKDG 392

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             EL  +  K   G+PL L+V+G +  G SK  W +A+ +L       I+ +LK SY++L
Sbjct: 393 FEELAWEVAKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDANIQSILKFSYNAL 452

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDL 418
            +  K++FL IAC    +  ++V                    KSLI+++   RI+MH+L
Sbjct: 453 CEEDKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIE-GGRIKMHNL 511

Query: 419 LRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           L  +G+EIVR     + I  PGKR  L   +DI ++L  +TG++++ GI    ++++ E+
Sbjct: 512 LEQLGKEIVRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSEL 571

Query: 475 HMNSYAFSKMPKLRFLRF---YGDK-NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           +++  AF  MP L+FLRF   YGD+ +K  +         +++ LEW   PL  +  N C
Sbjct: 572 NISERAFEGMPNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNFC 631

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL-EY 585
            E LV L M  +K+ +LW+  + L +    +       +   K+L+ LPD     NL E 
Sbjct: 632 TEYLVELNMRFSKLHKLWEGNRPLANLNWMY-------LNHSKILKELPDLSTATNLQEL 684

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             VK +++ ELP S+G+ + +++L L+  ++L  +P SI +L KL  L ++ C +L+   
Sbjct: 685 FLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEV-- 742

Query: 646 ELPCNLGL-----LSARNCTSLEKLP 666
            LP N+ L     L   +C  L++ P
Sbjct: 743 -LPANINLESLDELDLTDCLVLKRFP 767



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 42/218 (19%)

Query: 565 FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL------- 617
            ++ DC +L+R P+   N++ L +  TTI+E+P S+     ++ L LS N NL       
Sbjct: 755 LDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMHAL 814

Query: 618 -------------ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
                        + IP  ++ +S+L  L ++ C++L +LP+LP +L  L   NC SLE+
Sbjct: 815 DIITTMYFNDIEMQEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLER 874

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
           L     +    + +   N LKL+      I++               K    PG E+P +
Sbjct: 875 LDCSFHNPK--MSLGFINCLKLNKEAKELIIQI------------TTKCTVLPGREVPVY 920

Query: 725 FRHQSMGSSA---TLKTRPPRPAGYNKLISFAFCAVVV 759
           F H++   S+    L  RP   A       F  C ++V
Sbjct: 921 FTHRTKNGSSLRVNLNRRPLSTAS-----RFKACILLV 953


>gi|15241561|ref|NP_198701.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758062|dbj|BAB08641.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006983|gb|AED94366.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 986

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 258/909 (28%), Positives = 415/909 (45%), Gaps = 177/909 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL    +   I  F D  + R   I+ +L+  I  S I+I++
Sbjct: 9   YNVFPSFHGGDIRKTFLSHLRKQFNSNGITMFDDQGIERSQTIAPALIQAIRESRISIVV 68

Query: 62  FSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRFPEKM 103
            S+ YASS W                  FY VDPS VRKQ+  FG+ F +  + +  E+ 
Sbjct: 69  LSKNYASSSWCLNELVEILKCKDVVMPIFYEVDPSDVRKQTGDFGKAFKNSCKSKTKEER 128

Query: 104 KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEI 163
           +RW  AL    +++G  S     E+ +IE+IA DV  +L+AT        VG+E  I E+
Sbjct: 129 QRWIQALIFVGNIAGEHSLKWENEADMIEKIAKDVSDKLNATPSKDFDAFVGLEFHIREL 188

Query: 164 ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG----G 219
            SLL +  E V  + I G  GI K TIA A+ + +S +F+ S F  NVR +   G    G
Sbjct: 189 SSLLYLDYEQVRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGLDEYG 248

Query: 220 IK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS--------------- 261
           +K DLQ++LLS++     MR  ++ +  +RL  +KV I+ DDV                 
Sbjct: 249 LKLDLQERLLSKIMNQKGMRIEHLGTIRDRLHDQKVLIILDDVNDLDLYALADQTTWFGP 308

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+I+TT D ++L+    N  Y +      +A ++FC+ AF       + ++L ++  +
Sbjct: 309 GSRIIVTTEDNELLQKHDINNVYHVDFPSRKEALEIFCRCAFRQSSAPDTILKLAERVTE 368

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
               +PL L V+G  L G++++ WE  +R+LEI    + E  L++ YDSL ++++ +FL 
Sbjct: 369 LCGNLPLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQLRVGYDSLHENEQALFLS 428

Query: 382 IACFLEGEHRDEVISIF-------------DASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IA F   + R  V+++               A+KSLI++    +I MH+LL+ +GR+ ++
Sbjct: 429 IAVFFNYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQHVGRQAIQ 488

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           ++    P KR+ L    +I  VL+ +T    + GIS D++++  E+ ++  AF ++  L+
Sbjct: 489 RQ---EPWKRHILIDADEICNVLENDTDARIVSGISFDISRIG-EVFLSERAFKRLCNLQ 544

Query: 489 FLRF----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSLKMPCTKV 542
           FLR     Y +KN+  +      P   +R L+W   P ++L+  +  E LV L M  + +
Sbjct: 545 FLRVFKTGYDEKNRVRIPENMEFP-PRLRLLQWEAYPRRSLSLKLNLEYLVELDMEGSLL 603

Query: 543 EQLWDDVQ----------------------------------------RLPSSLCTFKTP 562
           E+LWD  Q                                         LPSS       
Sbjct: 604 EKLWDGTQPLANLKKMSLSSSWYLKKLPDLSNATNLEELDLRACQNLVELPSSFSYLHKL 663

Query: 563 ITFEIIDCKMLERLPDELE-----------------------NLEYLTVKGTTIRELPES 599
               ++ C+ L+ +P  +                        N+  L +  T + ELPES
Sbjct: 664 KYLNMMGCRRLKEVPPHINLKSLELVNMYGCSRLKSFPDISTNISSLDISYTDVEELPES 723

Query: 600 LGRLSWVKRLILSNNSNL--------------------ERIPESIRHLSKLTFLFISHCE 639
           +   S ++ L +  + NL                    E+IP+ I+++  L  LF+  C 
Sbjct: 724 MTMWSRLRTLEIYKSRNLKIVTHVPLNLTYLDLSETRIEKIPDDIKNVHGLQILFLGGCR 783

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD-- 697
           +L +LPELP +L  LSA  C SLE +    +  +S + ++  N  KL+      I++   
Sbjct: 784 KLASLPELPGSLLYLSANECESLESVSCPFN--TSYMELSFTNCFKLNQEARRGIIQQSF 841

Query: 698 --GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
             GW                 PG E+P    H+S G S T++     P          F 
Sbjct: 842 SHGWAS--------------LPGRELPTDLYHRSTGHSITVRLEGKTP----------FS 877

Query: 756 AVVVFPAFL 764
           A   F  FL
Sbjct: 878 AFFGFKVFL 886


>gi|357499535|ref|XP_003620056.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495071|gb|AES76274.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1065

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 271/884 (30%), Positives = 425/884 (48%), Gaps = 147/884 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFL+FRG DTR  FT +L+  L  K I TFID+ +L RGD I+ SLL  IE S I I 
Sbjct: 18  YQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRIFIA 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      F+ V+P+ VR Q  S+G   +   KRF
Sbjct: 78  VFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKRF 137

Query: 100 ---PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
              P+ M+R   WK AL++AA+LSG+  +    E KLI +I   +  ++           
Sbjct: 138 QNDPKSMERLQGWKEALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISQQPLHVATYP 197

Query: 154 VGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  +++++SLL  GS+ GV  + I+GIGG+ K T+A A++N I+  FE S F  NV+
Sbjct: 198 VGLQSRVQQMKSLLDEGSDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLENVK 257

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           E+  +  +K+LQ++LL      E+        I     RL  KK+ ++ DDV        
Sbjct: 258 ESSASNNLKNLQQELLLKTLQLEIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQLEA 317

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRDK +L      K Y ++EL   +A +L    AF  + + +S
Sbjct: 318 LAGRLDWFGPGSRVIITTRDKHLLDCHGIEKTYAVEELNETEALELLRWKAFKNEKVPSS 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++  +A+ YA G+PLA++V+G  L G+S    ES + K   IPH +I+++L++SYD+L
Sbjct: 378 YEDILKRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILRLSYDAL 437

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFY----RI 413
           D+ +++VFLDIAC ++G   +EV  I                  KSLI +   +    ++
Sbjct: 438 DEEEQSVFLDIACCIKGCRLEEVEQILHHHYGYSIKSHLRVLVDKSLIKISWCFFSGIKV 497

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            +H+L+  MG+E+VR+ES   PG+R+RLW   DI  VL +NTGT   E I ++++ +   
Sbjct: 498 TLHELIEVMGKEVVRQESPKEPGERSRLWSQDDIVHVLTENTGTGKTEMICMNLHSMESV 557

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLV 533
           I     AF KM +L+ L          + HL     + ++ L+W  C  K+L+       
Sbjct: 558 IDKKGKAFKKMTRLKTLIIENGHCSKGLKHLP----SSLKALKWEGCLSKSLSSSILSKK 613

Query: 534 SLKMP------CTKVEQLWD-----DVQRLPSSLCTFKTPITFEIIDCKMLERL------ 576
              M       C  +  + D     ++++L    C     I   I     LERL      
Sbjct: 614 FQDMTILILDHCEYLTHIPDVSGLSNLEKLSFECCYNLITIHNSIGHLNKLERLSAFGCR 673

Query: 577 ------PDELENLEYLTV-KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
                 P  L +L+ L +   ++++  PE L +++ +K + L  N ++  +P S ++LS+
Sbjct: 674 KLKRFPPLGLASLKELDICCCSSLKSFPELLCKMTNIKEIDLDYNISIGELPSSFQNLSE 733

Query: 630 LTFL---------FISHCERLQT--------LPELPCNLG----LLSARNCTSLEK---- 664
           L  L         F  H +R+ +        L    CNL      +  + C ++E     
Sbjct: 734 LDELSVREARMLRFPKHNDRMYSKVFSKVTKLRIYECNLSDEYLQIVLKWCVNVELLDLS 793

Query: 665 ------LPAGLSSMSSVLYVNL--CNFLK----LDPN----------ELSEIVKDGWMKH 702
                 LP  LS    + ++ L  C+ L+    + PN           LS   +   M  
Sbjct: 794 HNNFKILPECLSECHHLKHLGLHYCSSLEEIRGIPPNLKELSAYQCKSLSSSCRRMLMSQ 853

Query: 703 SLYEERGIKKSMYFPGNE--IPKWFRHQSMGSSATLKTRPPRPA 744
            L+E R  +    FP  +  IP WF HQS G + +   R   P+
Sbjct: 854 ELHEARCTR--FLFPNEKEGIPDWFEHQSRGDTISFWFRKEIPS 895


>gi|15237409|ref|NP_199438.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177707|dbj|BAB11081.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007977|gb|AED95360.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1205

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 236/742 (31%), Positives = 371/742 (50%), Gaps = 87/742 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG D R  F SH       K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGGDVRVTFRSHFLKEFDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPS VR Q   FG+ F +  KR  E+
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIIIPVFYGVDPSQVRYQIGEFGKIFEKTCKRQTEE 130

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K +WK ALT  A++ GFDS+    E+K+IEEIANDVL++L  T     +  VG+E  I 
Sbjct: 131 VKNQWKKALTHVANMLGFDSSKWDDEAKMIEEIANDVLRKLLLTTSKDFEDFVGLEDHIA 190

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-----GSYFALNVREAEE 216
            + +LL + S+ V  + IWG  GI K TIA A+FN + RHF+        FA   RE   
Sbjct: 191 NMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNLFRHFQVRKFIDRSFAYKSREIHS 250

Query: 217 TGGIKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT-------- 260
           +    D      LQ+  LSE+ +  N++  ++     RL  +KV I+ DDV         
Sbjct: 251 SANPDDHNMKLHLQESFLSEILRMPNIKIDHLGVLGERLQHQKVLIIIDDVDDQVILDSL 310

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR+I+ T +K  L     ++ Y +       A  + CQ AF         
Sbjct: 311 VGKTQWFGNGSRIIVVTNNKHFLTAHGIDRMYEVSLPTEEHALAMLCQSAFKKKSPPEGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L  +  +YA  +PL LKVLG YL G+ KE W   + +L+   + +IE +L+ISYD L+
Sbjct: 371 EMLVVQVARYAGSLPLVLKVLGSYLSGKDKEYWIDMLPRLQNGLNDKIERILRISYDGLE 430

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLR 420
              + +F  IAC         + S+   S        ++L++  + +     + MH LL+
Sbjct: 431 SEDQAIFRHIACIFNHMEVTTIKSLLANSIYGANVGLQNLVDKSIIHVRWGHVEMHPLLQ 490

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGR+IVR +SI  P KR  L    DI  VL +   T+ + GISL+ +K++ E+ ++  A
Sbjct: 491 EMGRKIVRTQSIGKPRKREFLVDPNDICDVLSEGIDTQKVLGISLETSKID-ELCVHESA 549

Query: 481 FSKMPKLRFLR----FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
           F +M  LRFL+     +G++N+  +          ++ L W + P++ +  N C + LV+
Sbjct: 550 FKRMRNLRFLKIGTDIFGEENRLHLPESFDYLPPTLKLLCWSEFPMRCMPSNFCPKNLVT 609

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPIT----FEIIDCKMLERLPD--ELENLEYLTV 588
           LKM  +K+ +LW+              P+T     ++     L+ +PD     NLE L  
Sbjct: 610 LKMTNSKLHKLWEGA-----------VPLTCLKEMDLDGSVNLKEIPDLSMATNLETLNF 658

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           +   ++ ELP  +  L+ + +L ++  ++LE +P    +L  L  +  + C +L+T P+ 
Sbjct: 659 ENCKSLVELPSFIQNLNKLLKLNMAFCNSLETLPTGF-NLKSLNRIDFTKCSKLRTFPDF 717

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+  L     T++E+LP+ L
Sbjct: 718 STNISDLYLTG-TNIEELPSNL 738



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 67/257 (26%)

Query: 526 NICAEKLVSLKMPCTKVE-QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
           N+  E L+ L++   +++ + W+ V +    L    +P    +           +L+N+ 
Sbjct: 737 NLHLENLIDLRISKKEIDGKQWEGVMKPLKPLLAMLSPTLTSL-----------QLQNIP 785

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
            L        ELP S   L  ++ L ++N  NLE +P  I +L  L  L    C RL++ 
Sbjct: 786 NLV-------ELPCSFQNLIQLEVLDITNCRNLETLPTGI-NLQSLDSLSFKGCSRLRSF 837

Query: 645 PELPC-----------------------NLGLLSARNCTSLEKLPAGLSSM--------- 672
           PE+                         NLGLLS   C+ L+ +   +S +         
Sbjct: 838 PEISTNISSLNLEETGIEEVPWWIDKFSNLGLLSMDRCSRLKCVSLHISKLKRLGKVDFK 897

Query: 673 --SSVLYVNLCNF---LKLDPNELSEIVKDGW---------MKHSLYEERGIKKSMYFPG 718
              ++  V+LC     ++++ N +  + K             +  L++E  I K M FPG
Sbjct: 898 DCGALTIVDLCGCPIGMEMEANNIDTVSKVKLDFRDCFNLDPETVLHQESIIFKYMLFPG 957

Query: 719 N-EIPKWFRHQSMGSSA 734
             E+P +F +++ GSS+
Sbjct: 958 KEEMPSYFTYRTTGSSS 974


>gi|15222556|ref|NP_176571.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325008|gb|AAG52450.1|AC010852_7 putative disease resistance protein; 28811-33581 [Arabidopsis
           thaliana]
 gi|332196041|gb|AEE34162.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1031

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 266/901 (29%), Positives = 413/901 (45%), Gaps = 171/901 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VF SF G + R    SH+    +   I  F D  + R + I  SL   I+ S I+I+I
Sbjct: 17  FNVFSSFHGPNVRKTLLSHMRKQFNFNGITMFDDQGIERSEEIVPSLKKAIKESRISIVI 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YA SRW                      FY V+PS VRKQ+  FG HF+     R 
Sbjct: 77  LSKKYALSRWCLDELVEILKCKEVMGHIVMTIFYGVEPSDVRKQTGEFGFHFNETCAHRT 136

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E  + W  AL +  +++G D      E+K+IE+IA DV  +L+AT      G+VG+E  
Sbjct: 137 DEDKQNWSKALKDVGNIAGEDFLRWDNEAKMIEKIARDVSDKLNATPSRDFNGMVGLEAH 196

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EET 217
           + E+ESLL +  +GV  + I G  GI K TIA A+ +++S  F+ + F  N++E+     
Sbjct: 197 LTEMESLLDLDYDGVKMVGISGPAGIGKTTIARALQSRLSNKFQLTCFVDNLKESFLNSL 256

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQL--NRLARKKVRIVFDDVT--------------- 260
             ++ LQ++ L+++     +R   S +   RL +++V I+ DDV                
Sbjct: 257 DELR-LQEQFLAKVLNHDGIRICHSGVIEERLCKQRVLIILDDVNHIMQLEALANETTWF 315

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
            SGSR+++TT +K++L+    N  Y +       A ++ C++AF    L     +L  + 
Sbjct: 316 GSGSRIVVTTENKEILQQHGINDLYHVGFPSDEQAFEILCRYAFRKTTLSHGFEKLARRV 375

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE-IIPHVEIEEVLKISYDSLDDSQKNV 378
            K    +PL L+VLG  L G+++E WE  +R+LE I+ H +IEEVL++ Y SL ++++++
Sbjct: 376 TKLCGNLPLGLRVLGSSLRGKNEEEWEEVIRRLETILDHQDIEEVLRVGYGSLHENEQSL 435

Query: 379 FLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGRE 425
           FL IA F      D V ++F              A KSLIN+     I +H LL+  GR+
Sbjct: 436 FLHIAVFFNYTDGDLVKAMFTDNNLDIKHGLKILADKSLINISNNREIVIHKLLQQFGRQ 495

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
            V KE    P K   L H  +I  VL+  TGT+A+ GIS D++ V+ E+ ++  +F ++P
Sbjct: 496 AVHKEE---PWKHKILIHAPEICDVLEYATGTKAMSGISFDISGVD-EVVISGKSFKRIP 551

Query: 486 KLRFLRFYG--DKNKCMVSHLEGVPFA-EVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
            LRFL+ +   D     V   E   F   +R L W   P K+L      + LV L MP +
Sbjct: 552 NLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTFQPQYLVELYMPSS 611

Query: 541 KVEQLWDDVQRL----------------------------------------PSSLCTFK 560
           ++E+LW+  QRL                                        PSS     
Sbjct: 612 QLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSNATNLERMDLSYCESLVEIPSSFSHLH 671

Query: 561 TPITFEIIDCKMLERLPDELE-----------------------NLEYLTVKGTTIRELP 597
                E+ +C  L+ +P  +                        N+  L V  T +  +P
Sbjct: 672 KLEWLEMNNCINLQVIPAHMNLASLETVNMRGCSRLRNIPVMSTNITQLYVSRTAVEGMP 731

Query: 598 ESLGRLSWVKRLILSN--------------------NSNLERIPESIRHLSKLTFLFISH 637
            S+   S ++RL +S+                    +S++E IPE I+ L  L  L +S 
Sbjct: 732 PSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLIDSDIETIPECIKSLHLLYILNLSG 791

Query: 638 CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD 697
           C RL +LPELP +L  L A +C SLE +   L++  + L  N  N  KL       IV  
Sbjct: 792 CRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAEL--NFTNCFKLGQQAQRAIV-- 847

Query: 698 GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
                   +   +  +   PG E+P  F HQ  G++ T+     RP        F  C V
Sbjct: 848 --------QRSLLLGTTLLPGRELPAEFDHQGKGNTLTI-----RPG-----TGFVVCIV 889

Query: 758 V 758
           +
Sbjct: 890 I 890


>gi|359493549|ref|XP_002268091.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 927

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 246/710 (34%), Positives = 373/710 (52%), Gaps = 90/710 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL+  L  + I TF DD+ L +G +I+  L   IE S I II
Sbjct: 21  YHVFLSFRGEDTRQTFTGHLYANLVARGIHTFRDDEELEKGGDIASDLSRAIEESKIFII 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA S+W                      FY V+P+ VR Q  SF   F    K  
Sbjct: 81  IFSKHYADSKWCLNELVKIIDCMTEKKSVVLPVFYHVEPTDVRNQGGSFKDAFLEHAKDA 140

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +    K++ WKNAL  AA+LSGF     + E++ I+ I  D+  RL+ T       +VG
Sbjct: 141 DQEKKKKIETWKNALKIAANLSGFHLQN-QSEAEFIQRIYEDIAIRLNRTPLDMGYNIVG 199

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++  + +++SL+ +  + V  + I+GIGGI K TI+ A++N IS  F+G  F  NV    
Sbjct: 200 MDFHLTQLKSLIKVELDEVLMVGIYGIGGIGKTTISKAIYNDISSQFDGCSFLGNVGGKC 259

Query: 216 ETGGIKDLQKKLLSELS-KDGNMRNIESQLN----RLARKKVRIVFDDVT---------- 260
           E G +K  +  L   +  K     NI   +N    RL  K+V IV DDV           
Sbjct: 260 EDGLLKLQKTLLQDIVKCKVPKFNNISQGINVIKERLRSKRVLIVLDDVDNYMQLENLAG 319

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 + S +IITT+DK +L        Y +++L +  + +LF  WAF  +        
Sbjct: 320 KHGWYGAKSIIIITTKDKHLLDQHEVKALYEVQKLNHEKSVELFNWWAFKQNTPKTGFES 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  ++Y  G+P+ALKVLG +L  +S   WES + K++ IP   ++ VLK+SYD LD +
Sbjct: 380 LSNSVVEYTHGLPVALKVLGGFLYEKSINEWESELHKVKKIPDEIVQNVLKVSYDKLDHT 439

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLF----------YRIRMHDLLRDMGR 424
            + +FLDIACF  G+ +D V  I   S +++ + +            ++ MHDL++ MG+
Sbjct: 440 CQEIFLDIACFFRGKDKDFVSRIL-GSYAMMGIKVLNDKCLLTISENKLDMHDLVQQMGQ 498

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR+E +  PG R+RLW   D+  VL +NTGT+AIEG+ +    +  +I  NS  F+K+
Sbjct: 499 EIVRQECLKEPGNRSRLWDCNDVDSVLTRNTGTQAIEGLFV-QGSLASQISTNS--FTKL 555

Query: 485 PKLRFLRFY----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
            +LR L+ Y      K+   + +L+  P+ E+R+  +   PL++L  N  A+ LV L + 
Sbjct: 556 NRLRLLKVYYPHMWKKDFKALKNLD-FPYFELRYFHFKGYPLESLPTNFHAKNLVELNLK 614

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLTVKGTTI 593
            + ++QLW   + L +           ++I+    E+L +      + NLE L +KG  I
Sbjct: 615 HSSIKQLWQGNEILDN----------LKVINLSYSEKLVEISDFSRVTNLEILILKG--I 662

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESI-RHLSKLTFLFISHCERLQ 642
            ELP S+GRL  +K L L   + L  +P+SI R L KL    +  C +L+
Sbjct: 663 EELPSSIGRLKALKHLNLKCCAELVSLPDSICRALKKLD---VQKCPKLE 709



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           E+   +  +S ++ L L  N +   IP +I  LSKL  L + HC++L  +PELP +L  L
Sbjct: 837 EILNHICHVSSLQNLSLDGN-HFSSIPANIIQLSKLRTLGLYHCQKLLQIPELPPSLRAL 895

Query: 655 SARNCTSLE 663
              +C  LE
Sbjct: 896 DVHDCPCLE 904


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 242/766 (31%), Positives = 385/766 (50%), Gaps = 84/766 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R +F SH+      K I TFID+ + R  +I   L+  I+ S IA+++
Sbjct: 56  HDVFPSFHGADVRKSFLSHILKEFKRKGIDTFIDNNIERSKSIGPELIEAIKGSKIAVVL 115

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDP+ V+KQ+  FG+ F +    + 
Sbjct: 116 LSKDYASSSWCLNELVEIMKCRKMLDQTVMTIFYEVDPTDVKKQTGDFGKVFKKTCMGKT 175

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
               ++W  AL+E A ++G  S     E+ +IE+I+ D+  +L+ +   ++  GLVG+  
Sbjct: 176 NAVSRKWIEALSEVATIAGEHSINWDTEAAMIEKISTDISNKLNNSTPLRDFDGLVGMGA 235

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E++E LLC+ S  V  + IWG  GI K TI   ++N++S  FE S F  N++      
Sbjct: 236 HMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMHTIL 295

Query: 219 GIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTSG------- 262
              D       LQ++ LS++   KD  + ++     RL  KKV +V DDV          
Sbjct: 296 ASSDDYSAKLILQRQFLSKILDHKDIEIPHLRVLQERLYNKKVLVVLDDVDQSVQLDALA 355

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR++ITT+D+++LK    N  Y++      DA ++FC +AFG         
Sbjct: 356 KETRWFGPRSRILITTQDRKLLKAHRINNIYKVDLPNSDDALQIFCMYAFGQKTPYDGFY 415

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L  K        PL L+V+G Y    SK+ W   + +L      +IE VLK SYD+L D
Sbjct: 416 KLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESVLKFSYDALCD 475

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
             K++FL IACF   E  +++                  A KSLI+++  + + MHD L 
Sbjct: 476 EDKDLFLHIACFFNHESIEKLEDFLGKTFLDIAQRFHVLAEKSLISINSNF-VEMHDSLA 534

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSY 479
            +G+EIVRK+S+  PG+R  L   +DI +VL  +T G  ++ GI LD+++ +   +++  
Sbjct: 535 QLGKEIVRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLDLHRNDDVFNISEK 594

Query: 480 AFSKMPKLRFLRF--YGDKNKCMV--SHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           AF  M  L+FLR   +G+    +V   H       ++R L+W   P+         E LV
Sbjct: 595 AFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYISRKLRLLDWMYFPMTCFPSKFNPEFLV 654

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L M  +K+E+LW+++Q L       +     ++   K L+ LPD     NLE L + G 
Sbjct: 655 ELNMWGSKLEKLWEEIQPL-------RNLKRMDLFSSKNLKELPDLSSATNLEVLNLNGC 707

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--- 647
           +++ ELP S+G  + + +L LS  S+L  +P SI +   L  +  SHCE L  LP     
Sbjct: 708 SSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGN 767

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNEL 691
             NL  L    C+SL++LP+ + + +++  L++  C+ LK  P+ +
Sbjct: 768 ATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSI 813



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 32/193 (16%)

Query: 565  FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL---GRLSWVKRLILSNNSNLERIP 621
             ++ DC +L+  P    N++ L ++GT I E+P SL    RL  ++ L   N S    + 
Sbjct: 917  LDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSLRSWPRLEDLQMLYSENLSEFSHVL 976

Query: 622  ESI-----------------RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            E I                   +++L  L +S C +L +LP+L  +L +L A NC SLE+
Sbjct: 977  ERITVLELSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSDSLIILDAENCGSLER 1036

Query: 665  LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
            L    ++  ++  ++  N LKLD      I++     +S+            P  E+ ++
Sbjct: 1037 LGCSFNN-PNIKCLDFTNCLKLDKEARDLIIQATARHYSI-----------LPSREVHEY 1084

Query: 725  FRHQSMGSSATLK 737
              ++++GSS T+K
Sbjct: 1085 ITNRAIGSSLTVK 1097



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 9/155 (5%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT----VKGTTIRELPESLGR 602
           +++  LPSS+         ++  C  L+ LP  + N   L     +  ++++ELP S+G 
Sbjct: 756 ENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGN 815

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNC 659
            + +K L L+  S+L ++P SI +   L  L ++ CE L  LP       NL +L+    
Sbjct: 816 CTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYL 875

Query: 660 TSLEKLPAGLSSMS--SVLYVNLCNFLKLDPNELS 692
           + L +LP+ + ++   S L +  C  L++ P  ++
Sbjct: 876 SCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNIN 910


>gi|356499336|ref|XP_003518497.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 746

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 215/592 (36%), Positives = 316/592 (53%), Gaps = 75/592 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  F  HL   L  K IK F DD+ +R G+ IS +L   IE S I I+
Sbjct: 132 YDVFLSFRGEDTRHKFIGHLRKELCQKGIKVFSDDKDLRIGEGISPALSSAIEKSKILIV 191

Query: 61  IFSERYASSRW-------------------------FFYRVDPSHVRKQSHSFGRHFSRL 95
           +FSE YA S W                          FY VDPS +R Q  S+G H    
Sbjct: 192 VFSENYAESTWCLDELVKILECTKIIIRDKKQLVFPIFYHVDPSDIRHQKKSYGEHMLEH 251

Query: 96  RKRF---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +KRF    ++++ W++AL+EA++  G   +    E++ IE+IA+ V K +        + 
Sbjct: 252 QKRFGKDSQRVQAWRSALSEASNFPGHHISTGY-ETEFIEKIADKVYKHIAPNPLHTGQN 310

Query: 153 LVGVECSIEEIESLLCIG--SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
            +G+   +EE+ SLL +    E V  L +WG+ G+ K  +A A++N I  HF+ + F  N
Sbjct: 311 PIGLWPRMEEVMSLLDMKPYDETVRMLGVWGLPGVGKTELATALYNNIVNHFDAASFLSN 370

Query: 211 VRE-AEETGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARK----------------- 250
           VRE + +  G++DLQK LLSE+ +  D ++      ++ + RK                 
Sbjct: 371 VREKSNKINGLEDLQKTLLSEMREELDTDLGCANKGMSEIKRKLEGKKVLLVLDDVDDKD 430

Query: 251 ---KVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
              K+    D   SGSR+IITTRDK VL     +  Y+M+EL    + +LFC  AF   H
Sbjct: 431 KLEKLAGGRDWFGSGSRIIITTRDKDVLIAHQVDNIYQMEELDKHHSLELFCWNAFKQSH 490

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCG---RSKEVWESAMRKLEIIPHVEIEEVL 364
                 +++ +AI  A+G+PLALKV+G  L      S E W+ A+ + E  P   I EVL
Sbjct: 491 PKTGFEDVSLRAIDVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERILEVL 550

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------KSLINLDLFYR----I 413
           K SYD L    K VFLDIACF +GE ++ V ++ D         K L+N  L       +
Sbjct: 551 KKSYDRLGSKPKQVFLDIACFFKGEKKEYVENVLDEDFGAKSNIKVLVNKSLLTIEDGCL 610

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHDL++DMGR+IVR+E+ N PG+ +R+W+H+D+  +L  + G++ I+GI LD  +   E
Sbjct: 611 KMHDLIQDMGRDIVRQEAPN-PGECSRVWYHEDVIDILTDDLGSDKIQGIMLDPPQ-REE 668

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
           +  N  AF KM +LR L     +N   +S  + +P   +R L+W + P K+ 
Sbjct: 669 VDWNGTAFDKMKRLRILIV---RNTSFLSEPQHLP-NHLRVLDWEEYPSKSF 716



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 2  YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
          YDVFL FRGED R  F  HL   L  K+I TF DD+ +R G+ I+ SL   IE S I II
Sbjct: 13 YDVFLCFRGEDVRYLFIGHLRKELCSKNINTFCDDEDLRMGEGIAPSLSKAIEESKILII 72

Query: 61 IFSERYASSRW 71
          +FSE YAS  W
Sbjct: 73 VFSENYASPPW 83


>gi|357499913|ref|XP_003620245.1| Resistance protein [Medicago truncatula]
 gi|355495260|gb|AES76463.1| Resistance protein [Medicago truncatula]
          Length = 1607

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 246/758 (32%), Positives = 363/758 (47%), Gaps = 123/758 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L   L  K ++TF+DD+ +R G+ I+ SLL  IE S +AI+
Sbjct: 10  YDVFLSFRGEDTRHGFTGYLKKALDDKGVRTFMDDKELRKGEEITPSLLKAIEQSMMAIV 69

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + SE YASS +                       FY+VDPS VRK   SFG    + +  
Sbjct: 70  VLSENYASSSFCLQELSKILDTMKDMVGRSVFPVFYKVDPSDVRKLKRSFGEGMDKHKAN 129

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
               + +WK +L +  DLSGF      PE   I +I   VL  ++         L+G+E 
Sbjct: 130 --SNLDKWKVSLHQVTDLSGFHYKGDTPEHMFIGDIVEQVLGNIEPLALPVGDYLIGLEH 187

Query: 159 SIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             + + SLL IGS+    +  I G+GGI K T+A +V+N I+  F+ S F  NVRE  E 
Sbjct: 188 QKQHLTSLLNIGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVRENHEK 247

Query: 218 GGIKDLQKKLLSELSKDGNM-----RNIESQLNRLARKKVRIVFDDVTS----------- 261
            G+  LQ  +LS++  + N      + I     RL +KK+ ++ DDV             
Sbjct: 248 HGLPYLQNIILSKVVGEKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKALAGKH 307

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF------GGDHLDA 310
                 SR+IITTRDK++L        Y ++ L   DA +L    AF        +++  
Sbjct: 308 KWFGPSSRIIITTRDKKLLTCHGVEHTYEVRGLNAKDAFELVRWKAFKDEFSPSDENVSL 367

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           + + + ++ + YA G PLAL+V+G +   ++ E  + A+ + E +PH +I+  L+IS+D+
Sbjct: 368 AQLHVIERVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQISFDA 427

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMH 416
           L+D +K VFLDIAC  +G     V  I  A               KSLI ++ F  + +H
Sbjct: 428 LEDEEKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGNVTLH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL+ DMG+EIVR+ES   PGKR RLW   DI QVL++NTGT  IE I  D       +  
Sbjct: 488 DLVEDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTGTSQIEIIRFDCWTT---VAW 544

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEV-RHLEWPQCPLKTLNICAEKLVSL 535
           +  AF KM  L+ L F            + V F +  +HL      L+  N  ++ LV+L
Sbjct: 545 DGEAFKKMENLKTLIFS-----------DYVFFKKSPKHLPNSLRVLECHNPSSDFLVAL 593

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK-GTTIR 594
                              SL  F T                   +N+  L ++ G+ + 
Sbjct: 594 -------------------SLLNFPT----------------KNFQNMRVLNLEGGSGLV 618

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP-CNLGL 653
           ++P   G LS +++L + N   L  I +S+  L KL  L + +C  +Q++P L   +L  
Sbjct: 619 QIPNISG-LSNLEKLSIKNCWKLIAIDKSVGFLGKLKILRLINCIEIQSIPPLMLASLVE 677

Query: 654 LSARNCTSLEKLPA---GLSSMSSVLYVNLCNFLKLDP 688
           L    C SLE  P    G       + V  C  L+  P
Sbjct: 678 LHLSGCNSLESFPPVLDGFGDKLKTMNVIYCKMLRSIP 715


>gi|357499321|ref|XP_003619949.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
 gi|355494964|gb|AES76167.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
          Length = 1065

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 254/793 (32%), Positives = 383/793 (48%), Gaps = 146/793 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD +L RGD I  SL   IE S I I 
Sbjct: 18  YQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFIDDRELQRGDEIKPSLDNAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA S +                      FY VDP+H+R Q+ S+G   ++  KRF
Sbjct: 78  VFSPNYAYSSFCLDELVHIIHCYKTKGRLVLPVFYGVDPTHIRHQTGSYGEALAKHAKRF 137

Query: 100 P-------EKMKRWKNALTEAADLSG------FDSNVIR-------PESK---------- 129
                   E++++WK AL +AA+LSG      ++  + R       P+S           
Sbjct: 138 HNNNTYNMERLQKWKIALAQAANLSGDHRHPGYEYKLTRKITLDQTPDSSSDHCSQGYEY 197

Query: 130 -LIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISK 187
             IE+I   +  +++       K  VG++  +++++SLL  GS+ GV  + ++GIGG+ K
Sbjct: 198 DFIEKIVKYISNKINRVPLHVAKYPVGLQSQLQQVKSLLDNGSDDGVHMVGMYGIGGLGK 257

Query: 188 ITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLL-----SELSKDGNMRNIES 242
            T+A A++N ++  FEG  F  +VRE      +K LQ+KLL      E+  D     I  
Sbjct: 258 STLARAIYNFVADQFEGLCFLHDVRENSAQNNLKHLQEKLLFKTTGLEIKLDHVSEGISI 317

Query: 243 QLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRM 286
              RL RKK+ ++ DDV S                GSRVIITTR+K +L        + +
Sbjct: 318 IKERLCRKKILLILDDVDSIRQLDALAGGLDWFGRGSRVIITTRNKHLLSTHGIKSTHAV 377

Query: 287 KELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWE 346
           + L   D H+L    AF  D + + + ++ ++A+ YA G+PL L+++G  L G+S E W+
Sbjct: 378 EGLYGTDGHELLRWMAFKSDKVPSGYEDILNRAVAYASGLPLVLEIVGSNLFGKSIEEWK 437

Query: 347 SAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKS--- 403
             +   + IP+ EI+++LK+SYD+L++ +++VFLDIAC  +G    E   +  A      
Sbjct: 438 YTLDGYDRIPNKEIQKILKVSYDALEEEEQSVFLDIACCSKGCGWREFEDMLRAHYGHCI 497

Query: 404 ------LINLDLFYR----IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
                 L++  L Y+    + +HDL+ DMG+ IVR+ES   PG+R+RLW   DI+ VLK+
Sbjct: 498 THHLGVLVDKCLIYQSYGDMTLHDLIEDMGKAIVRQESPKEPGERSRLWCQDDIFHVLKE 557

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVR 513
           N+GT  IE I ++   +   I     AF KM KL+ L     +        +G+ +    
Sbjct: 558 NSGTSKIEMIYMNFPSMESVIDQKGKAFRKMTKLKTLIIEDGRFS------KGLKYLPSS 611

Query: 514 HLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT--------- 564
             ++    + TL+ C E L  +      +  L  ++Q+L  + C  K  IT         
Sbjct: 612 LRKFQNMKVLTLDEC-EHLTHI----PDISGL-SNLQKLTFNFC--KNLITIDDSIGHLN 663

Query: 565 -FEIID---CKMLERLPD----ELENLE--------------------YLTVKGTTIRE- 595
             E++    CK LE  P      L+NLE                    Y  V    +RE 
Sbjct: 664 KLELVSASCCKKLENFPPLWLVSLKNLELSLHPCVSGMLRFPKHNDKMYSNVTELCLREC 723

Query: 596 ------LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
                 LP  L     VK L LS N  ++ +PE +     L  L +  CE L+ +  +P 
Sbjct: 724 NLSDEYLPIILKWFVNVKHLDLSENVGIKILPECLNECHLLRILNLDGCESLEEIRGIPP 783

Query: 650 NLGLLSARNCTSL 662
           NL  LSA  C SL
Sbjct: 784 NLNYLSATECLSL 796


>gi|297805476|ref|XP_002870622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316458|gb|EFH46881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1127

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 279/1049 (26%), Positives = 465/1049 (44%), Gaps = 221/1049 (21%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF SF G D R  F SHLH+  + K I TF D+++ RG  I   L+  I  S +++++
Sbjct: 13   HQVFSSFHGPDVRRGFLSHLHNHFASKGITTFNDEKIDRGQTIGPELVQAIRESRVSVVL 72

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
             S++YASS W                      FY VDPS V+KQ   FG+ F +  +   
Sbjct: 73   LSKKYASSSWCLDELLEILKCNEAQGQIVMTIFYDVDPSDVKKQRGEFGKAFEKTCEGKT 132

Query: 101  EKMK-RWKNALTEAADLSGFDS--------------------NVIRP-----------ES 128
            E++K RW  AL   A ++G  S                    N   P           E+
Sbjct: 133  EEVKQRWIEALAHVATIAGEHSLNWYVSMNFSAFMFLKKVFVNFDPPTAFCFAFARANEA 192

Query: 129  KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
            ++I++IA DVL +L+ T      G+VG+E  + +++S+LC+ S+ V  + IWG  GI K 
Sbjct: 193  EMIQKIATDVLNKLNLTPSRDFDGMVGLEAHLAKLKSMLCLESDEVKMIGIWGPAGIGKS 252

Query: 189  TIAGAVFNKISRHFEGSYFALNVREA-EETGGIKD------LQKKLLSELSKDGNMR--N 239
            TIA A+ N++S  F+   F  N++ + +   G+ +      LQ +L+S++    NM+  +
Sbjct: 253  TIARALDNQLSSSFQLKCFMGNLKGSLKSIVGVDEHDSKLWLQNQLMSKILNQENMKIHH 312

Query: 240  IESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKK 283
            + +   RL  ++V I+ DDV                  GSR+I+TT DK++LK    N  
Sbjct: 313  LGAIKERLHDQRVLIILDDVDDLKILEVLAEELSWFGFGSRIIVTTEDKKILKAHGINDI 372

Query: 284  YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
            Y +      DA ++ C  AF    +     E+  K       +PL L V+G  L G+ K 
Sbjct: 373  YHVNFPSKEDALEILCLSAFKQSSVPDGFEEVAKKVANLCGKLPLGLCVVGKSLRGQRKH 432

Query: 344  VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD---- 399
            VWE  + ++E     +IE++L+I +D L    +++FL IACF   E  D+V ++      
Sbjct: 433  VWELQLSRIEASLDRKIEDILRIGFDRLSKKNQSLFLHIACFFNNEVADDVTTLLSDSNL 492

Query: 400  ---------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                     A KSL+       I MH LL+ +GR+IV ++S + PGKR  L+   +I  V
Sbjct: 493  DVGNGLETLADKSLVRKSTSGHIVMHHLLQQLGRQIVHEQS-DEPGKRQFLFEADEICDV 551

Query: 451  LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR-----FYGDKNKCMVSHLE 505
            L   TGT ++ GIS D + +  E+ +   AF  M  LRFLR     F G+    +   L+
Sbjct: 552  LSTETGTGSVIGISFDTSNIG-EVSVGKGAFEGMRNLRFLRIFRRWFGGEGTLQIPEDLD 610

Query: 506  GVPFAEVRHLE-WPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQ-------------- 550
             +P   + H E +P+  L       E+L+ L MP +K+++LW  +Q              
Sbjct: 611  YLPLLRLLHWEFYPRTSLPR-RFQPERLMELHMPYSKIKKLWGGIQSLPNLKIIDLMFSR 669

Query: 551  --------------------------RLPSSLCTFKTPITFEIIDCKMLERLPDE--LEN 582
                                       LPSS+   +     ++  C ML+ +P    L +
Sbjct: 670  QLKEIPNLSNATNLEELTLEGCGSLVELPSSIKNLQKLKILDVGFCCMLQVIPSNINLAS 729

Query: 583  LEYLTVKG---------------------TTIRELPESL-GRLSWVKRL----------- 609
            L+ LT+ G                     T I ++P S+ G LS + RL           
Sbjct: 730  LKILTMNGCSRLRTFPEISSNIKVLNLGDTDIEDVPPSVAGCLSRLDRLNICSSSLKRLT 789

Query: 610  --------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
                    ++ N S++E IP+ +  L++L +L +  C +L+++P LP +L +L A +C S
Sbjct: 790  HVPLFITDLILNGSDIETIPDCVIGLTRLEWLSVKRCTKLESIPGLPPSLKVLDANDCVS 849

Query: 662  LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
            L+++     + ++VL  + C  LKLD        + G ++ S+Y+       +  PG  I
Sbjct: 850  LKRVRFSFHTPTNVLQFSNC--LKLDKES-----RRGIIQKSIYD------YVCLPGKNI 896

Query: 722  PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVY 781
            P  F H++ G S T+   P   +  ++  +    ++++ P      R             
Sbjct: 897  PADFTHKATGRSITIPLAPGTLSASSRFKA----SILILPVEYAGLR------------- 939

Query: 782  AVCCDWKRKSEGHLYSWFLGKISY-VESDHVFLGCNSFGGEYFGPNYDEFSFRIHCS--- 837
             + C  + K    ++S+    +S    S H+F+    F G+ F          +  S   
Sbjct: 940  TISCSIRSKGGVTVHSYEFEYLSLSFRSKHLFI----FHGDLFPQGNKCHEVDVTMSEII 995

Query: 838  FHFPPYLERGEVKKCGIHFVYAQDSADHI 866
            F F   +   ++ +CG+  +  +     I
Sbjct: 996  FEFSFNVGNAKISECGVQIMTEEAEGSSI 1024


>gi|317415950|emb|CAR94516.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 807

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 252/770 (32%), Positives = 391/770 (50%), Gaps = 115/770 (14%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAIII 61
           +VFLSFR  D+R  FT +L+  L    I TF+D +QL  G+ +S  L    E S I++II
Sbjct: 24  EVFLSFRSFDSRKGFTDNLYKALIHYGIHTFMDAEQLESGEPVSTELFKATEESQISVII 83

Query: 62  FSERYASSRW----------------------FFYRVDPSHVRKQ-SHSFGRHFSRLRKR 98
            S  YA+S W                       FY + PS  RKQ    F   F++ +K 
Sbjct: 84  LSTNYATSTWCLNELVTMVELAENNESRLILPVFYGMTPSEARKQIGVHFEEGFAQHKKD 143

Query: 99  F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F   P ++ RWK +LT  A+LSG+D    R E+ +IE+I   +   L  TF +  K  VG
Sbjct: 144 FEGEPGEVARWKKSLTAIANLSGYDIRNYRNETMVIEKIVERIFGVLINTFSNDLKDFVG 203

Query: 156 VECSIEEIESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  + EI+S +  IG+E V  + I G+ GI K TIA A+  +I   F+   F   V E 
Sbjct: 204 MD-RVNEIKSNMSRIGTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFISKVGEI 262

Query: 215 EETGGIKDLQKKLLSE-LSKDGNMRNIESQL-NRLARKKVRIVFDDVTS----------- 261
                +  ++++L    L+     +N++  +  RL  K+V IV D+V             
Sbjct: 263 SRKKSLFHIKEQLCDHLLNMQVTTKNVDDVIRKRLCNKRVLIVLDNVEELEQIDAVAGND 322

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS++IITT  +++L N +  K Y +++L   ++  LFC+ AF  DH   
Sbjct: 323 GADELSSRFGKGSKIIITTACERLLIN-YNPKIYTIEKLTQDESLLLFCRKAFKKDHPMD 381

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV---EIEEVLKIS 367
            + +L  + + Y  G+PLAL+V G  L  RS E W S +  L+   +    +I   LK S
Sbjct: 382 GYEKLCYEFLDYVDGLPLALEVFGNSLLDRSVEDWSSRLASLKDDNYSGKNKIVNYLKES 441

Query: 368 YDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDASKSL--INLDLFY----------RIR 414
           +D L++  Q+ +FLDIACF +GE    V +IF++      INL++            ++ 
Sbjct: 442 FDGLENQEQREIFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKYLVSIVGGKLW 501

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH+LL+ MGRE+VR ES    G R+RLW H +   VLK N GT+A++GI L +    + +
Sbjct: 502 MHNLLQQMGREVVRGES-KKEGARSRLWLHTEAIHVLKGNKGTDAVQGIFLSLPHPEK-V 559

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           H+    FS M  LR L+ Y  +    + +L      E+  LEW + PLK+L  +   +KL
Sbjct: 560 HLKKDPFSNMDNLRLLKIYNVEFSGCLEYLSD----ELSFLEWHKYPLKSLPSSFEPDKL 615

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG 590
           V L +  +++EQLW++++R    L      +   + DC+ L ++P  D++ NLE L +KG
Sbjct: 616 VELNLSESEIEQLWEEIERPLEKL------LILNLSDCQKLIKIPDFDKVPNLEQLILKG 669

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPE-----------------------SIRH 626
            T++ E+P+ +  L  +    LS  S LE+IPE                       SI H
Sbjct: 670 CTSLSEVPDIIN-LRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAIEELPTSIEH 728

Query: 627 LSKLTFLFISHCERLQTLPELPCN----LGLLSARNCTSLEKLPAGLSSM 672
           LS LT L +  C+ L +LP++ C+    L +L+   C++L+KLP  L S+
Sbjct: 729 LSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNLDKLPDNLGSL 778


>gi|359489070|ref|XP_003633868.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 544

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 209/526 (39%), Positives = 283/526 (53%), Gaps = 80/526 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR NFT HL   L    I TF DD+L RG+ I+Q LLG IE S  +II+
Sbjct: 21  FDVFLSFRGEDTRYNFTDHLFENLKRMGINTFRDDKLERGEEIAQELLGAIEGSRFSIIV 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSERYA S+W                      FY VDPS VRKQ+ SFG+ F++      
Sbjct: 81  FSERYADSKWCLDELTKIMECKKEMDQKVLPVFYHVDPSDVRKQTGSFGKAFAKHGTTVD 140

Query: 101 E-KMKRWKNALTEAADLSGFDSNVIRP---ESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
           E K+KRW+ A+TEA+ LSG+  +VI+    ESK IEEIA  + K+LD      +  +VG+
Sbjct: 141 EQKVKRWRAAMTEASSLSGW--HVIKDYEYESKYIEEIAEVIRKKLDPKLLHVDDDIVGI 198

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  ++E++SL+      V  + I+G GGI K TIA  V+N+I   F G+ F  NV+E+  
Sbjct: 199 DFRLKELKSLINSQLHDVRVVGIYGTGGIGKTTIAKIVYNEIQCEFNGASFLENVKESFN 258

Query: 217 TG-----------GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT----- 260
            G           GI   QK  LS +    NM       N L  KKV IV DDV      
Sbjct: 259 KGCQLQLQQKLLQGIAG-QKIELSNIDDGINMIK-----NTLGSKKVLIVTDDVDRREQL 312

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                      +G+ +I+TTRD+ +L+    +  Y +K+L   +A +LF + AF  +   
Sbjct: 313 ESLVGSRNWFGAGTTIIVTTRDQLLLRYYGVDVTYEVKKLDNVEAIELFNKHAFKQNAPK 372

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             ++ L++  + YAQG+PLALKVLG  L G + + W+SA  KL+  P  EI +VL+ISYD
Sbjct: 373 EDYVTLSNSMVAYAQGLPLALKVLGSSLHGMTIDEWKSASNKLKNNPKKEINDVLRISYD 432

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIR--------------- 414
            LD S+K VFLDIACF EGE +  V  I D      NL   Y IR               
Sbjct: 433 MLDGSEKKVFLDIACFFEGEDKAFVSKILDGC----NLHATYNIRVLCDKCLITISDSMI 488

Query: 415 -MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA 459
            MH+L++ MG  I+R+E    P K +RLW   DIY    +    ++
Sbjct: 489 QMHNLIQQMGWAIIREEYPEDPSKWSRLWDLNDIYDAFSRQKSVQS 534


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 279/930 (30%), Positives = 422/930 (45%), Gaps = 221/930 (23%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT +L+  L    I+TF DD+ L +G  I+  L   I+ S I +I
Sbjct: 19  YDVFLSFRGVDTRKNFTDYLYTTLVRYGIQTFRDDEELEKGGIIASDLSRAIKESRIFMI 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA SRW                      FY VDPS +RKQS  FG   +   +  
Sbjct: 79  IFSKNYAYSRWCLNELVKITECARQEGSMVLPIFYHVDPSDIRKQSGIFGDALAHHERDA 138

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            EK K    +W+ ALTEAA LSG+  +  + E++++ EI N ++  L     + ++ +VG
Sbjct: 139 DEKKKEMIQKWRTALTEAASLSGWHVDD-QFETEVVNEIINTIVGSLKRQPLNVSENIVG 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   +E+++ ++      V  + I G GGI K TIA A++NKIS  ++ S F  N+RE  
Sbjct: 198 ISVHLEKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLRNIREKS 257

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDV---------- 259
           + G    LQ +LL ++ K+   +  NI+  +  + R    K+V ++ DDV          
Sbjct: 258 Q-GDTLQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQLKHLA 316

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDKQVL     +  Y +++    +A +LF  WAF  +    ++ 
Sbjct: 317 QKKDWFNAKSTIIITSRDKQVLTRYGVDTPYEVQKFDKKEAIELFSLWAFQENLPKEAYE 376

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD
Sbjct: 377 NLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDD 436

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRDMG 423
             K +FLD+ACF +G+ +D V  I              K LI +     + MHDL++ MG
Sbjct: 437 MDKEIFLDVACFFKGKSKDFVSRILGPHAEYGIATLNDKCLITISK-NMMDMHDLIQQMG 495

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EI+R+E ++  G+R+R+W   D Y VL +N                             
Sbjct: 496 KEIIRQECLDDLGRRSRIW-DSDAYDVLTRNM---------------------------- 526

Query: 484 MPKLRFLRFYGDKNKCMVS----HLEG-------------VPFAEVRHLEWPQCPLKTL- 525
           M +LR L+ + D     +S    HL+G              P  E+ +  W    L++L 
Sbjct: 527 MDRLRLLKIHKDDEYGCISRFSRHLDGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLP 586

Query: 526 -NICAEKLVSLKMPCTKVEQLW-----------------------DDVQRLPS-SLCTFK 560
            N  A+ LV L +  + ++QLW                        D   +P+  + T K
Sbjct: 587 TNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLK 646

Query: 561 TPITFEII----------------DCKMLERLPD---ELENLEYLTVKGTTIRELPES-- 599
             +  E +                DC  L+R P+    +  L  L + GT I ELP S  
Sbjct: 647 GCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSS 706

Query: 600 -------------------------------------------------LGRLSWVKRLI 610
                                                            + RLS +K L 
Sbjct: 707 FGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELN 766

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
           L +N +   IP +I  LS+L  L +SHC+ L+ +PELP +L LL A            LS
Sbjct: 767 LKSN-DFRSIPATINRLSRLQVLNLSHCQNLEHIPELPSSLRLLDAHGPN------LTLS 819

Query: 671 SMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQS 729
           + S + + +L N    +  +L++  ++     S Y   GI   +  PG+  +P+W     
Sbjct: 820 TASFLPFHSLVNCFNSEIQDLNQCSQN--CNDSAYHGNGI--CIVLPGHSGVPEWM---- 871

Query: 730 MGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
           MG  A     P      N+ + FA C V V
Sbjct: 872 MGRRAI--ELPQNWHQDNEFLGFAICCVYV 899



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 100/236 (42%), Gaps = 54/236 (22%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVK------------------- 589
            LP S+C   +  T  I  C  L++LP+ L   ++LE L VK                   
Sbjct: 1173 LPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLR 1232

Query: 590  -----GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                    +RE+P  +  L+ ++ L+L  N     IP+ I  L KL  L +SHC+ LQ +
Sbjct: 1233 ILRLINCGLREIPSGICHLTSLQCLVLMGN-QFSSIPDGISQLHKLIVLNLSHCKLLQHI 1291

Query: 645  PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            PE P NL  L A  CTSL+         SS+L+              S   K G  K   
Sbjct: 1292 PEPPSNLRTLVAHQCTSLK-------ISSSLLW--------------SPFFKSGIQK--- 1327

Query: 705  YEERGIKKSMYFP-GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            +  RG     + P  N IP+W  HQ  GS  TL T P      +  + FA C++ V
Sbjct: 1328 FVPRGKVLDTFIPESNGIPEWISHQKKGSKITL-TLPQNWYENDDFLGFALCSLHV 1382


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 264/853 (30%), Positives = 402/853 (47%), Gaps = 185/853 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR  FT HL+  L  K I+TF DD+L RG+ I+  LL  IE S ++I++
Sbjct: 20  HDVFLSFRGEDTRYKFTDHLYAALVNKGIRTFRDDKLKRGEEIAPLLLKVIEESRLSIVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS---RLRK 97
           FSE YASSRW                      FY VDPS +R Q  SF + F+   R  +
Sbjct: 80  FSENYASSRWCLDELVKIMECRQKIRQILVPIFYHVDPSDLRTQKGSFEKSFASHERHGR 139

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK++RW+ ALTEA++LSG+                  + + L A    +   LVG++
Sbjct: 140 DSKEKIQRWRAALTEASNLSGW-----------------HLFEGLKAISYGQ---LVGMD 179

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
               EI   L +  + V  + I GIGGI K TIA  ++N+    FE + F  N+ E  + 
Sbjct: 180 SRAREISLRLDLELDDVRIIGICGIGGIGKTTIAKVIYNQFFYQFEHTSFLENISEISKN 239

Query: 218 GGIKDLQKKLL------------SELSKDGNMRNIESQLNRLARKKVRIVFDDVT----- 260
            G+  LQ +LL            S + +  NM       N L  K+V IV DDV      
Sbjct: 240 QGLLHLQNQLLCNILEVEENIYISAIGQGSNMIK-----NILRSKRVFIVLDDVDDSNQL 294

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                      +GSRVIITTR+K +L     ++ Y +++L + D ++LF   AF  +   
Sbjct: 295 ESLVGNHDWLGNGSRVIITTRNKHLLTVQRVDELYEVEKLKFEDGYELFNWHAFRQNIPK 354

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
              I L+  A+ Y QG+PLALK+LG  L  +++  W+S ++KL+  P  +I  +LK S+ 
Sbjct: 355 QDFINLSYDAVCYCQGLPLALKILGSLLIDKTRPQWKSELKKLKREPDKKIHNILKRSFH 414

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            LD +QK++FLDIAC  +G+ R+ V  I D             + K LI + L   I MH
Sbjct: 415 GLDHTQKDIFLDIACCFKGKKRNFVSRILDGCNFYVERGLKDLSDKCLITI-LNNWINMH 473

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL++ MG EI+R +  N P K +RLW  +DI +    +   + +E + LD++++ +++  
Sbjct: 474 DLIQQMGWEIIRGKFPNEPSKWSRLWDPEDIERAFATSEAMKKMEAVFLDLSRL-KQMQF 532

Query: 477 NSYAFSKMPKLRFLRFYGDKN----------------KCMVSHLEGVPFAEVRHLEWPQC 520
           N+   SKM KLR L+ Y  ++                K ++      P  E+R+L W + 
Sbjct: 533 NTKVLSKMNKLRLLKVYWRRHYGHVRKDYKLTLPENFKLILPENFEFPSYELRYLYWERY 592

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLWD------------------------------- 547
            LK+L  N   E LV +K+P + + QLW                                
Sbjct: 593 SLKSLPSNFKGENLVKIKLPNSNIRQLWQGNKCLGKLKVLDLSDSKQLIELPNFSNISNL 652

Query: 548 ---------DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---------- 588
                     + ++ SS+   K     ++  CK L  LP  ++ L+ L +          
Sbjct: 653 EKLILHNCRSLDKIDSSIEVLKNLNVLDLSWCKKLTSLPSGMQYLDSLEILNLNGCSNLE 712

Query: 589 ------------------KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
                              GT I+ELP S+  L+ VK L + +  N+  +  SI  L  L
Sbjct: 713 KFPKIRWSFRKGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSL 772

Query: 631 TFLFISHCERLQTLPELP---CNLGLLSARNCTSLEKLPAGLSSMSS--VLYVNLCNFLK 685
             L++  C  L+T PE+     +L LLS    T++++LP  +  +    +L+V  C+ L+
Sbjct: 773 QLLYLQGCSNLETFPEITEDMASLELLSLSE-TAIKELPPTIQHLKQLRLLFVGGCSRLE 831

Query: 686 LDPNELSEIVKDG 698
             P  L E +KD 
Sbjct: 832 KFPKIL-ESLKDS 843



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 124/302 (41%), Gaps = 50/302 (16%)

Query: 571  KMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
            K+LE L D L NL+ L+ +      +P  +  LS ++ L L  N N   IP +I  L KL
Sbjct: 835  KILESLKDSLINLD-LSNRNLMDGAIPNEIWCLSLLEILNLRRN-NFRHIPAAITQLRKL 892

Query: 631  TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE 690
            T L ISHC+ LQ  PE+P +L  + A +CTSLE L +  S + S                
Sbjct: 893  TLLKISHCKMLQGFPEVPLSLKHIEAHDCTSLETLSSPSSKLWS---------------- 936

Query: 691  LSEIVKDGWMKHSLYEERGIK---KSMYFPGNE-IPKWFRHQSMGSSATLKTRPPRPAGY 746
                    W K + +++   +     +  PG+  IP W  HQ M     ++  P      
Sbjct: 937  ----SLLQWFKSAKFQDHEAQPKCAGIMIPGSSGIPGWVLHQEMEREVRIEL-PMNWCKD 991

Query: 747  NKLISFA-FCAVV--VFPAFLKY-FRHKSGEDDWDG---NVYAVCCDWKRKSEGHLYSWF 799
            N  + F  FC         +L Y  R    ED ++      +   CD+      ++YS  
Sbjct: 992  NHFLGFVLFCLYQDNGTDPYLSYDLRLHDDEDSYEAVRRGWFGCQCDYY----PNIYSGV 1047

Query: 800  LGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYA 859
            L ++       +     S   +Y    +      I  SF     L  G +K CGIH +Y+
Sbjct: 1048 LDELWVTYHPKI-----SIPEKYHSNQFKH----IQTSF---SALTVGVIKSCGIHLIYS 1095

Query: 860  QD 861
            QD
Sbjct: 1096 QD 1097


>gi|227438113|gb|ACP30546.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 799

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 244/764 (31%), Positives = 385/764 (50%), Gaps = 89/764 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R NF SH H  L L  I  F D  + R  +I   L   I  S ++I++
Sbjct: 11  YHVFPSFCGEDVRRNFLSHFHKELQLNGIDAFKDGGIKRSRSIWPELKQAIWESRVSIVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ Y  S W                      FY VDP+ VRKQS  FG+ F  +   R 
Sbjct: 71  LSKNYGGSSWCLDELVEIMECKEVSGQTVMPIFYGVDPTDVRKQSGDFGKSFDTICHVRT 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+ +RWK ALT  A ++G  S+    ++ +IE I  +VL+ L+    SK+ K LVG+E 
Sbjct: 131 EEERQRWKQALTSVASIAGDCSSKWDNDAVMIERIVTNVLQELNWCTPSKDFKDLVGLEA 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISR---HFEGSYFALNVREAE 215
            +  + S+LC+ +  V  + IWG  GI K TIA A++N++S     F+ + F  NV+  +
Sbjct: 191 HVSNLNSMLCLDTNEVKIIGIWGPAGIGKTTIARALYNQLSSSGDEFQLNLFMENVKGVQ 250

Query: 216 ---ETGGIK---DLQKKLLSEL-SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
              E  G      LQ++ LSE+ ++   + ++     RL  +K  +V DDV         
Sbjct: 251 MRKELHGYSLKLHLQERFLSEIFNQRTKISHLGVAQERLKNQKALVVLDDVDGLEQLNAL 310

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    G+R+I+TT D+Q+LK    N+ Y +      +A K+ C++AFG +      
Sbjct: 311 IDTTEWFGYGTRIIVTTEDRQLLKAHGINQVYEVGYPSQGEAFKILCRYAFGDNSAPKGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L  +  K A  +PL L VLG  L G SKE W +A+ +L    + +IE++L + YD LD
Sbjct: 371 YDLATEVTKLAGDLPLGLSVLGASLRGLSKEEWINAIPRLRTSLNGKIEKLLGVCYDGLD 430

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLL 419
           +  K +FL +AC   GE  D V  +   S             +SLI++     I MH LL
Sbjct: 431 EKDKTLFLHVACLFNGEKVDRVKQLLAKSALDADFGLKVLVDRSLIHIYADGYIVMHFLL 490

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           + MG+EI+R + IN PG+R  L   ++I  VL   TGT+ + GISLDM++++ E++++  
Sbjct: 491 QQMGKEIIRGQCINDPGRRQFLVDAQEISDVLVDETGTKNVLGISLDMSELDDEVYISEK 550

Query: 480 AFSKMPKLRFLRFYG----DKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           AF KM  L+FLR Y     +  K  + H L+ +P  ++R L     P+K +      E L
Sbjct: 551 AFKKMTNLQFLRLYNHFPDEAVKLQLPHGLDYLP-RKLRLLHRDSYPIKCMPSKFRPEFL 609

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITF-EIIDCKMLERLPD-----ELENLEYL 586
           V L +  +K+ +LW+ VQ L        T +T+ ++   K ++ +P+      LE L YL
Sbjct: 610 VELTLRDSKLVKLWEGVQPL--------TSLTYMDLSSSKNIKDIPNLSGAMNLEKL-YL 660

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
                 +     SL  L+ +K L +S  + L+ +P +I +L  L+ L +  C +L+  P 
Sbjct: 661 RFCENLVTVSSSSLQNLNKLKVLDMSCCTKLKALPTNI-NLESLSVLNLRGCSKLKRFPC 719

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
           +   +  +S    T++EK+P+ +   S ++ + +  C  LK  P
Sbjct: 720 ISTQVQFMSLGE-TAIEKVPSLIRLCSRLVSLEMAGCKNLKTLP 762


>gi|295083305|gb|ADF78106.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 263/762 (34%), Positives = 379/762 (49%), Gaps = 118/762 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY-----RI 413
           + QKNVFLDIAC        +V  I  A               KSLI     +     R+
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSVLYVNLCN 682
            P  P  L  L   N   C SLE  P  L  M ++  + L N
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSN 736


>gi|15238999|ref|NP_196686.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8953387|emb|CAB96660.1| RPP1 disease resistance protein-like [Arabidopsis thaliana]
 gi|332004269|gb|AED91652.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1189

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 239/777 (30%), Positives = 381/777 (49%), Gaps = 105/777 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF GED R +F SH+        I  F+D+++ RG++I   LL  I  S IAII+
Sbjct: 62  HQVFPSFSGEDVRRDFLSHIQMEFQRMGITPFVDNEIKRGESIGPELLRAIRGSKIAIIL 121

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S  YASS+W                      FY+VDPS V+  +  FG+ F +     P
Sbjct: 122 LSRNYASSKWCLDELVEIMKCREEYGQTVMAIFYKVDPSDVKNLTGDFGKVFRKTCAGKP 181

Query: 101 EK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
           +K + RW+ A  + A ++G+ S     E+ +I++IA D+   L  +  S++  GLVG+  
Sbjct: 182 KKDIGRWRQAWEKVATVAGYHSINWDNEAAMIKKIATDISNILINSTPSRDFDGLVGMRA 241

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            +E+++ LLC+ ++ V  + IWG  GI K TIA  V+N++S  F+ S F  N++      
Sbjct: 242 HLEKMKPLLCLDTDEVRIIGIWGPPGIGKTTIARVVYNQLSHSFQLSVFMENIKANYTRP 301

Query: 214 --AEETGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVTS-------- 261
             +++      LQ+  +S+++K  D  + ++    +RL  KKV +V D V          
Sbjct: 302 TGSDDYSAKLQLQQMFMSQITKQKDIEIPHLGVAQDRLKDKKVLVVLDGVNQSVQLDAMA 361

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+D+++ +    N  Y++      +A ++FC +AFG +       
Sbjct: 362 KEAWWFGPGSRIIITTQDQKLFRAHGINHIYKVDFPPTEEALQIFCMYAFGQNSPKDGFQ 421

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L  K I  A  +PL L+++G Y  G S+E W+ ++ +LE     +I+ +LK SYD+LDD
Sbjct: 422 NLAWKVINLAGNLPLGLRIMGSYFRGMSREEWKKSLPRLESSLDADIQSILKFSYDALDD 481

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-----------------ASKSLINLDLFYRIRMH 416
             KN+FL IACF  G+     I I +                 A KSLI+   +  I MH
Sbjct: 482 EDKNLFLHIACFFNGKE----IKILEEHLAKKFVEVRQRLNVLAEKSLISFSNWGTIEMH 537

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIH 475
            LL  +G EIVR +SI+ PG+R  L+  ++I  VL  +  G++++ GI      +  E  
Sbjct: 538 KLLAKLGGEIVRNQSIHEPGQRQFLFDGEEICDVLNGDAAGSKSVIGIDFHY-IIEEEFD 596

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           MN   F  M  L+FLRF  D +   +S        +++ L+W   P+  L   +  E L+
Sbjct: 597 MNERVFEGMSNLQFLRFDCDHDTLQLSRGLSYLSRKLQLLDWIYFPMTCLPSTVNVEFLI 656

Query: 534 SLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFE---IIDCKMLERLP 577
            L +  +K++ LW+ V+ L +              L    T I      + +C  L +LP
Sbjct: 657 ELNLTHSKLDMLWEGVKPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLP 716

Query: 578 DELE---NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
             +    NLE L + G +++ ELP S G    +++L+L   SNL  +P SI +   L  L
Sbjct: 717 SCIGNAINLEDLDLNGCSSLVELP-SFGDAINLQKLLLRYCSNLVELPSSIGNAINLREL 775

Query: 634 FISHCERLQTLPEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            + +C  L  LP       NL +L    C++L +LP+ +         N  N  KLD
Sbjct: 776 DLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIG--------NAINLQKLD 824



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 40/232 (17%)

Query: 532  LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID------CKMLERLPDELENLEY 585
            LV L +    +++L + + +  S L      I  E +D      C ML+R P+   N+  
Sbjct: 879  LVELPLSIGNLQKLQELILKGCSKLEDLPININLESLDILVLNDCSMLKRFPEISTNVRA 938

Query: 586  LTVKGTTIRELPESLGRLSWVKRLILSNNSNL--------------------ERIPESIR 625
            L + GT I E+P S+     +  L++S   NL                    + +P  I+
Sbjct: 939  LYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHVLDIITNLDLSGKEIQEVPPLIK 998

Query: 626  HLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLK 685
             +S+L  L +    ++ +LP++P +L  + A +C SLE+L     +    L+   C   K
Sbjct: 999  RISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESLERLDCSFHNPEITLFFGKC--FK 1056

Query: 686  LDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
            L+      I++               K    PG E+P +F H++ G S T+K
Sbjct: 1057 LNQEARDLIIQTP------------TKQAVLPGREVPAYFTHRASGGSLTIK 1096



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL----TVKGTTIRELPESLGRL 603
           ++  LPSS+         ++  C  L  LP  + N   L        +++ ELP S+G  
Sbjct: 806 NLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNA 865

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL-----LSARN 658
           + +  + LSN SNL  +P SI +L KL  L +  C +L+   +LP N+ L     L   +
Sbjct: 866 TNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLE---DLPININLESLDILVLND 922

Query: 659 CTSLEKLPAGLSSMSSVLYV 678
           C+ L++ P  +S+    LY+
Sbjct: 923 CSMLKRFPE-ISTNVRALYL 941



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 33/192 (17%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKG-TTIRELPESLGRL 603
           ++  LPSS+         ++  C  L RLP  + N   L  L + G + + ELP S+G  
Sbjct: 758 NLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 817

Query: 604 SWVKRLIL-------------SNNSNLE-----------RIPESIRHLSKLTFLFISHCE 639
             +++L L              N  NL+            +P SI + + L ++ +S+C 
Sbjct: 818 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCS 877

Query: 640 RLQTLPELPCNLGLLSA---RNCTSLEKLPAGLSSMS-SVLYVNLCNFLKLDPNELSEIV 695
            L  LP    NL  L     + C+ LE LP  ++  S  +L +N C+ LK  P E+S  V
Sbjct: 878 NLVELPLSIGNLQKLQELILKGCSKLEDLPININLESLDILVLNDCSMLKRFP-EISTNV 936

Query: 696 KDGWMKHSLYEE 707
           +  ++  +  EE
Sbjct: 937 RALYLCGTAIEE 948


>gi|357494181|ref|XP_003617379.1| CCP [Medicago truncatula]
 gi|355518714|gb|AET00338.1| CCP [Medicago truncatula]
          Length = 1651

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 256/750 (34%), Positives = 378/750 (50%), Gaps = 105/750 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGED R NF  +L   L  + I  F DD+ +R G++IS +L   IE S IA+I
Sbjct: 15  YDVFLSFRGEDVRHNFIGYLRDALQHRGINAFFDDKNLRIGEDISPALSKAIEESKIAVI 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FSE YASSRW                       F+ VDPS VR Q +S+ +       +
Sbjct: 75  VFSENYASSRWCLGELVKIIECTKRNKKQISFPIFFHVDPSDVRHQKNSYEKAMVDHEVK 134

Query: 99  F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F    E +K W  AL+EAADL G   N    E   I+EI   V   +           VG
Sbjct: 135 FGKDSENVKAWITALSEAADLKGHHINT-GSEIDHIKEIVEKVHANIAPKPLLYGDDPVG 193

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           +E   E + S L   ++    L I G+GGI K  +A +++NKI   FE + F  NVRE +
Sbjct: 194 LEHHTENVMSRLD-NTDHTVMLGIHGLGGIGKTELAKSLYNKIVHQFEAASFLANVREKS 252

Query: 215 EETGGIKDLQKKLLSEL--SKDGNM----RNIESQLNRLARKKVRIVFDDVTS------- 261
            +  G++DLQK LLSE+    D ++    + I+    +L  KKV +V DDV +       
Sbjct: 253 NKINGLEDLQKTLLSEMFEKPDTDLGSTSKGIKEIKQKLGNKKVLLVLDDVDNKEQLKNL 312

Query: 262 ---------GSRVIITTRDKQVLKNCWA---NKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                    GSR+IITTRDK +L    +    K Y M EL   D+ +LFC+ AFG  H +
Sbjct: 313 AGGSDWFGPGSRIIITTRDKGLLIGTHSFVVQKIYEMTELNEKDSLELFCRNAFGKSHPE 372

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISY 368
             +  ++ +A+ YA+G+PLALKV+G  L G +S   WE A++  + IP   I+EVL++SY
Sbjct: 373 TGYEAVSSRAVGYAKGLPLALKVIGSNLGGGKSLRAWEDALKNYDRIPRRGIQEVLQVSY 432

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD------ASKSLINLDLFYR----IRMHDL 418
           + L+ + ++VFLDIACF +G+  D V  I D        + L+N  L       + MHDL
Sbjct: 433 NVLEPNAQSVFLDIACFFKGDRVDYVEEILDDFAAVTGIEELVNKSLLIVKDGCLDMHDL 492

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVL-KKNTGTEAIEGISLDMNKVNREIHMN 477
           +++MGR+IV++ES  +P KR+RLW HKDI +VL  +  G++ ++GI LD  +  ++   +
Sbjct: 493 IQEMGRDIVKQESPRNPAKRSRLWSHKDIIKVLSNEKYGSDVLQGIMLDPPQPIKQQDWS 552

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSL 535
             AF +M  LR L     +N    S  + +P   +  L+W + P K+       E+++  
Sbjct: 553 DTAFEQMNCLRILIV---RNTTFSSEPKHLP-DNLTLLDWEEYPSKSFPAMFHPEEII-- 606

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
                        V  LP S  T + P        K+  +L   + N      K  +I  
Sbjct: 607 -------------VFNLPESKLTLEEPF-------KVFSKLT--IMNFS----KNESITV 640

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE---LPCNLG 652
           +P+  G +  ++ L L N +NL  + ES+  L  LT    S C +L+   +   LP +L 
Sbjct: 641 IPDVSG-VENLRVLRLDNCTNLIMVHESVGFLEHLTHFSASGCAKLRNFQQKMFLP-SLE 698

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
            L    C  LE  P  L+ M+  L + + N
Sbjct: 699 FLDLNLCVELEHFPDILNKMNKPLKIYMIN 728



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 121/334 (36%), Gaps = 73/334 (21%)

Query: 482 SKMPKLRFLRFYGDKNKCMV----------SHLEGVPFAEVRHLE----WPQCPLKTLNI 527
           S +  LR LR     N  MV          +H      A++R+ +     P      LN+
Sbjct: 645 SGVENLRVLRLDNCTNLIMVHESVGFLEHLTHFSASGCAKLRNFQQKMFLPSLEFLDLNL 704

Query: 528 CAE------------KLVSLKMPCTKVEQLWDDVQRL-----------------PSSLCT 558
           C E            K + + M  T +E+L D +  L                 P SL T
Sbjct: 705 CVELEHFPDILNKMNKPLKIYMINTAIEELPDSIGNLIGLVSIEMTSSWKLKYIPCSLFT 764

Query: 559 FKTPITFEIIDC------KMLERLPDELENLEYLTV-----KGTTIRELPESLGRLSWVK 607
               +TF+   C      + L  +P        L        G +  +L   L     ++
Sbjct: 765 LPNAVTFKFGGCSQLALRRFLHDIPSAANGRSTLKALHFGNSGLSDEDLKAILISFLELQ 824

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE---K 664
            LI S+N N   +P  I+  + LT L +S C  L+ +P +  NL +L+   C  LE   +
Sbjct: 825 ELIASDN-NFVSLPVCIKDSAHLTKLDVSGCNMLREIP-VCINLRILNVYGCVMLEHISE 882

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
           LP  +  + +   + L         E SE++   W +    E RG++  M      +P W
Sbjct: 883 LPCTIQKVDARYCIRLNR-------ETSEML---WYQVK-SERRGLQIVMPQKKTGVPNW 931

Query: 725 FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           F +   G +     R   P   N  ++  F  V 
Sbjct: 932 FDYSCKGGNPRFWVRKKFP---NVALALVFEGVT 962


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 242/707 (34%), Positives = 366/707 (51%), Gaps = 82/707 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG+DTR+NFT HL      K I+TF DD +L +G+ I  +L+  IE S I +I
Sbjct: 22  YDVFVSFRGKDTRNNFTDHLFGAFHRKKIRTFRDDTRLKKGERILSNLMQAIEGSQIFVI 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S W                      FY VDPS VR Q+  + + F++   R 
Sbjct: 82  VFSKNYAFSSWCLKELAKILDCVRVSGKHVLPIFYDVDPSEVRNQTGDYEKAFAKHEDRE 141

Query: 100 P-EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
             E++KRW+ ALT+ A+L+G+D  N    +   IE+I  +++ +L   F S    LVG+E
Sbjct: 142 KMEEVKRWREALTQVANLAGWDMRNKHESQYAEIEKIVQEIISKLGHNFSSLPNDLVGME 201

Query: 158 CSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
             +EE+E LL +      ++  I G+GGI K T+A  ++++IS  F+   F  NV +   
Sbjct: 202 SPVEELEKLLLLDLTDDVRIVGICGMGGIGKTTLATVLYDRISHQFDAHCFIDNVSKTYR 261

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQLN----RLARKKVRIVFDDVT----------- 260
             G I  L++ L   L++D  + N+    N    RL   K  IV D+V            
Sbjct: 262 HCGQIGVLKQLLHQTLNEDLQICNLYHAANLMQSRLRYVKSIIVLDNVNEVEQLEKLVLN 321

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                +GSR+II +RDK VLK C     Y+++ L  A++ KLFC+ AF    +   + EL
Sbjct: 322 REWLGAGSRIIIISRDKHVLKKCGVTVVYKVQLLNGANSLKLFCKKAFDSVDITGDYEEL 381

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             + +KYA  +PLA+KVLG  L GRS   W S + +L+  P+ +I +VL+ISYD L D +
Sbjct: 382 KYEVLKYANDLPLAIKVLGSVLSGRSVSYWRSYLDRLKENPNKDILDVLRISYDELQDLE 441

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           K +FLDIACF  G     V  + D               KSLI+    + I MH+LL+ +
Sbjct: 442 KEIFLDIACFFCGNEELYVKKVLDCCGFHSEIGIRALVDKSLIDNSSGF-IEMHNLLKVL 500

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM---NSY 479
           GR IV+  +   PGK +R+W H+D Y  + K T T   E I LD     RE+ +   ++ 
Sbjct: 501 GRTIVKGNAPKEPGKWSRVWLHEDFYN-MSKATETTNNEAIVLD-----REMEILMADAE 554

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           A SKM  LR L F   K   +++ +  +   +++ LEW   P   L  +     LV L +
Sbjct: 555 ALSKMSNLRLLIFRDVKFMGILNSVNCLS-NKLQFLEWYNYPFSYLPSSFQPNLLVELIL 613

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIR 594
             + ++QLW  ++ LP+           ++   K L   PD   + NLE++ ++G T + 
Sbjct: 614 QHSNIKQLWKGIKHLPNLR-------ALDLSYSKNLIEAPDFGGVLNLEWIILEGCTNLA 666

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            +  S+G L  +  L L N  +L  +P +I  LS L +L IS C ++
Sbjct: 667 RIHPSVGLLRKLAFLNLKNCISLVSLPSNILSLSSLGYLNISGCPKV 713



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 25/180 (13%)

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            + ++P+++G +  ++ L L  N N   +P SI  LSKL  L + HC++L+  PE+P   
Sbjct: 791 NLSQIPDAIGSMHSLETLNLGGN-NFVSLPYSINQLSKLVHLNLEHCKQLRYFPEMPSPT 849

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV--------KDGWMKHS 703
            L   R   +    P GL   +    V++     +    + +I+        + GW+   
Sbjct: 850 SLPVIRETYNFAHYPRGLFIFNCPKIVDIARCWGMTFAWMIQILQVSQESDTRIGWI--- 906

Query: 704 LYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
                     +  PGN+IPKWF +QS+G+S +L   P      N  I  A C  VVF AF
Sbjct: 907 ---------DIVVPGNQIPKWFNNQSVGTSISLDPSPIMHG--NHWIGIACC--VVFVAF 953


>gi|295083329|gb|ADF78118.1| rj2 protein [Glycine max]
 gi|308171408|gb|ADO15998.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 263/762 (34%), Positives = 379/762 (49%), Gaps = 118/762 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNQLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY-----RI 413
           + QKNVFLDIAC        +V  I  A               KSLI     +     R+
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSVLYVNLCN 682
            P  P  L  L   N   C SLE  P  L  M ++  + L N
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSN 736


>gi|298953301|gb|ADI99935.1| TIR-NBS-LRR class resistance protein [Cucumis sativus]
 gi|315507077|gb|ADU33174.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]
          Length = 939

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 270/869 (31%), Positives = 415/869 (47%), Gaps = 153/869 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR NFTSHL+  L  + I  FID +L RG+ I  SLL  IE S I+I++
Sbjct: 17  FDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEICASLLEAIEGSKISIVV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS W                      FY+VDPS V KQS  FG  F++L  RF 
Sbjct: 77  ISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQSGRFGEEFAKLEVRFF 136

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD-ATFQ-SKNKGLVGVEC 158
            KM+ WK AL   + +SG+       E+ LI+ I  +V K+LD AT Q    K  VG++ 
Sbjct: 137 NKMQAWKEALITVSHMSGWPVLQRDDEANLIQNIVQEVWKKLDRATMQLDVAKYPVGIDI 196

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
            +  +  L  + S G+    ++G+GG+ K TIA A++NKI+  FEG  F  N+REA  + 
Sbjct: 197 QVRNL--LPHVMSNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQY 254

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS---------- 261
           GG+   QK+LL E+  D ++      R I    NRL  KK+ ++ DDV +          
Sbjct: 255 GGLVQFQKELLCEILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGG 314

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GS+VI TTR+KQ+L     +K   +  L Y +A +LF    F   H    ++EL
Sbjct: 315 HDWFGHGSKVIATTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLEL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL--EIIPHV---EIEEVLKISYDS 370
           + +A+ Y +G+PLAL+VLG +L         S  +++  E   H    +I++ L+ISYD 
Sbjct: 375 SKRAVDYCKGLPLALEVLGSFLHSIGD---PSNFKRILDEYEKHYLDKDIQDSLRISYDG 431

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           L+D      +++                    SL+ +  F R+ MH++++ MGR I   E
Sbjct: 432 LEDEGITKLMNL--------------------SLLTIGRFNRVEMHNIIQQMGRTIHLSE 471

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
           + +   KR RL    D   VL  N    A++ I L+  K  + + ++S AF K+  L  L
Sbjct: 472 T-SKSHKRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTK-LDIDSRAFDKVKNLVVL 529

Query: 491 RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE---QL 545
              G+      S LE +P + +R + WPQ P  +L      E L+ LK+P + ++   Q 
Sbjct: 530 EV-GNATSSESSTLEYLP-SSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQG 587

Query: 546 WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGR 602
           +   +RL              + D  +L  +PD     NL+YL + G   + ++ ES+G 
Sbjct: 588 YMSCERLKE----------INLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGS 637

Query: 603 LSWVKRLILSNN-SNLERIPESIRHLSKLTFLFISHC----------ERLQTLP------ 645
           LS +  L  S++    E+ P  ++ L  L FL + +C          E ++++       
Sbjct: 638 LSKLVALHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGY 696

Query: 646 -----ELPCNLGLLSARNCTSL------------EKLPAGLSSMSSVLYVNLCNFLKLDP 688
                +L   +G L++    SL             K+P G+  MS+   ++L  F    P
Sbjct: 697 STVTYQLSPTIGYLTSLKHLSLYYCKELTTLPKISKVPEGVICMSAAGSISLARF----P 752

Query: 689 NELSEIVK-DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN 747
           N L++ +  D  ++   Y + G  K +      IP W+R++SM  S T       PA Y 
Sbjct: 753 NNLADFMSCDDSVE---YCKGGELKQLVLMNCHIPDWYRYKSMSDSLTFFL----PADY- 804

Query: 748 KLISFAFCAVVVFPAFLKYFRHKSGEDDW 776
             +S+ +      P F    + +   DDW
Sbjct: 805 --LSWKWK-----PLFAPCVKFEVTNDDW 826


>gi|295083321|gb|ADF78114.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 376/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY-----RI 413
           + QKNVFLDIAC        +V  I  A               KSLI     +     R+
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENI 729


>gi|308171398|gb|ADO15993.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171402|gb|ADO15995.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171404|gb|ADO15996.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171406|gb|ADO15997.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  311 bits (798), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 376/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFY-----RI 413
           + QKNVFLDIAC        +V  I  A               KSLI     +     R+
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENI 729


>gi|357499327|ref|XP_003619952.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494967|gb|AES76170.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1075

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 248/721 (34%), Positives = 365/721 (50%), Gaps = 116/721 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DT+  FT +L+  LS K I TFIDD +L +GD I+ SLL +IE S IAII
Sbjct: 169 YDVFISFRGTDTQFGFTGNLYKALSDKGINTFIDDKELKKGDEITPSLLKSIEESRIAII 228

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY  +PSHVRK + S+G   ++   +F
Sbjct: 229 VFSKEYASSLFCLDELVHIIHCSNEKGSKVIPVFYGTEPSHVRKLNDSYGEALAKHEDQF 288

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKG 152
                  E + +WK AL +AA+LSG   N+    E   IE+I  DV  +++         
Sbjct: 289 QNSKENMEWLLKWKKALNQAANLSGHHFNLGNEYERDFIEKIVTDVSYKINHVPLHVADY 348

Query: 153 LVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  I E+ SLL +GS +GVC + I G  G+ K  +A A++N IS  FE   F  NV
Sbjct: 349 LVGLKSRISEVNSLLDLGSTDGVCIIGILGTEGMGKTKLAQAIYNLISNQFECLCFLHNV 408

Query: 212 REAEETGGIKDLQKKLLSEL----SKDGNMRN----IESQLNRLARKKVRIVFDDVTSGS 263
           RE     G++ LQ+++LS+     +K G++      +  Q   L R            GS
Sbjct: 409 RENSVKHGLEYLQEQILSKSIGFETKFGHVNEGIPVLIGQAGWLGR------------GS 456

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
           RVIITTRDKQ+L +      Y    L    A +L    AF     D+S+  + ++A+KYA
Sbjct: 457 RVIITTRDKQLLSSHGIKFFYEAYGLNKEQALELLRTKAFKSKKNDSSYDYILNRAVKYA 516

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIA 383
            G+PLAL+V+G  L G+S    ES + K + IPH +I+++LK+SYD+LD+ Q++VFLDIA
Sbjct: 517 SGLPLALEVVGSNLFGKSIAECESLLDKYDRIPHEDIQKILKVSYDALDEEQQSVFLDIA 576

Query: 384 CFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           CF +   ++ V  +                  KSLI +  +  + +HDL+ DMG EIVR+
Sbjct: 577 CFFKERRKEFVQEVLHDHYGYCIKSHIGVLVDKSLIKISFYGGVTLHDLIEDMGIEIVRQ 636

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           ES N PG+R+RLW H DI  VL+KN  T  +  + L      + + + S  FSK P    
Sbjct: 637 ESRNKPGERSRLWCHDDIVHVLQKNIVTMTLLFLHLITYDNLKTLVIKSGQFSKSPMY-- 694

Query: 490 LRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD 547
                            +P + +R L W +  LK+L  +I +EK   +K+          
Sbjct: 695 -----------------IP-STLRVLIWERYSLKSLSSSIFSEKFNYMKV---------- 726

Query: 548 DVQRLPSSLCTFKTPI-------TFEIIDCKMLERLPDELENLEYLTVKGTTIRE--LPE 598
               L  + C + T I        FE    K L      + N++++ +  + + +  LP 
Sbjct: 727 ----LTLNHCHYLTHIPDVSGLSNFEKFSFKKL------ISNVDHVLLNQSNLSDECLPI 776

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
            L   + VK L LS N N + +PE +     L  L +  C+ L+ +  +P NL  LSA  
Sbjct: 777 LLKWCANVKLLYLSGN-NFKILPECLSVCHLLRILNLDECKALEEIRGIPPNLNYLSAME 835

Query: 659 C 659
           C
Sbjct: 836 C 836


>gi|297791725|ref|XP_002863747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309582|gb|EFH40006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 241/758 (31%), Positives = 387/758 (51%), Gaps = 85/758 (11%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           D+FLSF GED R +F SH +  L  K I  F D+++ RG ++   L   I  S IA++IF
Sbjct: 19  DLFLSFSGEDIRKSFLSHFYKELDRKPILVFKDNEIKRGISLGPKLKRAIRDSRIAVVIF 78

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S +YASS W                      F+ +DP+HVRKQ+  FG +F +      E
Sbjct: 79  SRKYASSSWCLNELLEIVRCKKEFSQVVIPIFFHLDPTHVRKQTGVFGMNFEKTCHNKTE 138

Query: 102 KMK-RWKNALTEAADLSGFDSNVI-RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           KMK R + ALTE A+++G+ S+V  + E+K+IE I  DVL  L  T     +  VG+E  
Sbjct: 139 KMKIRLRRALTEVANITGYHSSVTCKNEAKMIEAIIADVLGELALTPSKDYEDFVGIETH 198

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREAEE 216
           I ++  LL + ++ V  + I G  GI K +IA  +FN++SR F  + F   A   +  E 
Sbjct: 199 IAKMNFLLHLEAKEVRMVGICGPSGIGKTSIARVLFNRLSRRFRCNVFIDRAFLSKSMEH 258

Query: 217 TGGIK--------DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
             G           LQ   LSE+   +D  + ++ +   RL   KV I  DD+       
Sbjct: 259 YSGANLGDYNMKLHLQGIFLSEILGKRDIKICHLGAVGERLKNHKVLIFIDDLEYQVVLD 318

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRV++ T+ K +LK     + Y +       + ++ CQ+AF  +H   
Sbjct: 319 TLAGHTDWFGCGSRVVVITKYKHLLKAHGIGRIYEVPLPSNPLSLQILCQYAFRQNHPPD 378

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +EL  +    A  +PL L VLG +L  R K+ W   + +     H  IEE LK+SY+ 
Sbjct: 379 GFMELASETSLRAGNLPLVLNVLGSHLRSRDKKYWMDMLLRFGKGQHGNIEETLKLSYNG 438

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRMHDL 418
           L+ + + +F  IACF  GE  D++ S+   S        K+L++  L       + MH L
Sbjct: 439 LNKNDEAIFRHIACFFNGEEVDDIKSLLADSDLDVNMGIKNLVDKSLIKETCNTVEMHSL 498

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           ++++G+EI R +S + PG+R  +   KD++ +L+ NTGTE + GISLD+++ + E+H++ 
Sbjct: 499 IQEIGKEINRTQS-SEPGEREFIVDSKDVFTILEDNTGTENVLGISLDIDETD-ELHIHE 556

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            AF +M  L+FLR    +NK +  +L    + +P  ++R L W   PL+++    C + L
Sbjct: 557 SAFKEMRNLQFLRISTKENKEVRLNLPEDFDYLP-PKLRLLSWRGYPLRSMPSTFCPQSL 615

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L+M  +  E LWD VQ     L T K     ++   K L+ +PD     NLE L +  
Sbjct: 616 VKLEMRYSYFEMLWDGVQ----PLTTLK---KMDLWGSKNLKEIPDLSMATNLETLNLGA 668

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
            +++ EL  S+  L+ +KRL LS   NLE +P +  +L  L  L +  C  +++ P++  
Sbjct: 669 CSSLVELHSSVQYLNKLKRLNLSYCENLETLPTNF-NLQALDCLNLFGCSSIKSFPDIST 727

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           N+  L+    T +E++P  + + + +  + + N  KL+
Sbjct: 728 NISYLNLSQ-TRIEEVPWWIENFTELRTIYMWNCDKLE 764


>gi|295083309|gb|ADF78108.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 375/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GVWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSCCYSLESFPKILGKMENI 729


>gi|295083311|gb|ADF78109.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 375/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GVWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSCCYSLESFPKILGKMENI 729


>gi|295083313|gb|ADF78110.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 375/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GVWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSCCYSLESFPKILGKMENI 729


>gi|9965103|gb|AAG09951.1| resistance protein LM6 [Glycine max]
          Length = 863

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 250/745 (33%), Positives = 361/745 (48%), Gaps = 110/745 (14%)

Query: 10  GEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIFSERYAS 68
           G+DTR  FT +L+  L  + I TFIDDQ L RGD I  +L   I+ S IAI + S+ YAS
Sbjct: 3   GQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYAS 62

Query: 69  SRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP---EKMKR 105
           S +                     FY+VDPSHVR Q  S+G   ++ +KRF    EK+++
Sbjct: 63  SSFCLDELVTILHCKSQGLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKLQK 122

Query: 106 WKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE 164
           W+ AL + ADLSG+   +    E + I  I  ++ ++            VG+E  + E+ 
Sbjct: 123 WRMALHQVADLSGYHFKDGDSYEYEFIGSIVEEISRKFSRASLHVADYPVGLESEVTEVM 182

Query: 165 SLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDL 223
            LL +GS  V  +  I G+GG+ K T+A AV N I+ HF+ S F  NVRE     G+K L
Sbjct: 183 KLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREESNKHGLKHL 242

Query: 224 QKKLLSELSKDGNMRNIESQ------LNRLARKKVRIVFDDVTS---------------- 261
           Q  LLS+L  + ++     Q       +RL RKKV ++ DDV                  
Sbjct: 243 QSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIVGRPDWFGP 302

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSRVIITTRDK +LK     + Y +K L  + A +L    AF  + +D S+ ++ ++ + 
Sbjct: 303 GSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSYEDVLNRVVT 362

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           YA G+PLAL+V+G  L  ++   WESAM   + IP  EI+E+LK+S+D+L + QKNVFLD
Sbjct: 363 YASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALGEEQKNVFLD 422

Query: 382 IACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
           IAC  +G    EV +I                  KSL+ +     + MHD+++DMGREI 
Sbjct: 423 IACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMIQDMGREIE 482

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE--IHMNSYAFSKMP 485
           R+ S   PGK  RL   KDI QV K       IE I LD +  ++E  +  N  AF KM 
Sbjct: 483 RQRSPEEPGKCKRLLLPKDIIQVFK-------IEIICLDFSISDKEETVEWNENAFMKMK 535

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
            L+ L        C  S         +R LEW + P   L  N     LV  K+P + + 
Sbjct: 536 NLKILII----RNCKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSIT 591

Query: 544 QLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLTVKGTTIRELPE 598
                     S   + +      +++   C+ L ++PD  +L NL+ L+           
Sbjct: 592 SFEFHGSSKASLKSSLQKLGHLTVLNFDRCEFLTKIPDVSDLPNLKELS----------- 640

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
                +W + L+         + +SI  L+KL  L    C +L + P  P NL  L   N
Sbjct: 641 ----FNWCESLV--------AVDDSIGFLNKLKTLSAYGCRKLTSFP--PLNLTSLETLN 686

Query: 659 ---CTSLEKLPAGLSSMSSVLYVNL 680
              C+SLE  P  L  M ++  + L
Sbjct: 687 LGGCSSLEYFPEILGEMKNITVLAL 711



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           R + V  L L  N N   +PE  + L  LT L +  C+ LQ +  LP NL    ARNC S
Sbjct: 801 RFAHVGYLNLPGN-NFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPNLKHFDARNCAS 859

Query: 662 L 662
           L
Sbjct: 860 L 860


>gi|295083319|gb|ADF78113.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 375/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENI 729


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 247/749 (32%), Positives = 388/749 (51%), Gaps = 83/749 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R  F SH    L  KSI TF D+++ R  +I+  L+  I+ S IA+I+
Sbjct: 13  YDVFPSFSGEDVRKTFLSHFLRELERKSIITFKDNEMERSQSIAPELVEAIKDSRIAVIV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY +DPSH+RKQS  FG  F +  +   
Sbjct: 73  FSKNYASSSWCLNELLEIMRCNKYLGQQVIPVFYYLDPSHLRKQSGEFGEAFKKTCQNQT 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K +WK ALT+ +++ G+ S     E+ +IEEI++ +L +L  T  +  +  VG++  
Sbjct: 133 EEVKNQWKQALTDVSNILGYHSKNCNSEATMIEEISSHILGKLSLTPSNDFEEFVGIKDH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREAEE 216
           IE++  LL + S+ V  + IWG  GI K TIA A+F+ +S  F+ S +   A   +  E 
Sbjct: 193 IEKVRLLLHLESDEVRMVGIWGTSGIGKTTIARALFSNLSSQFQSSVYIDRAFISKSMEG 252

Query: 217 TGGIKD--------LQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
            G            L++  L E+    NM+ I +   RL  +KV I+ DD+         
Sbjct: 253 YGRANPDDYNMKLRLRENFLFEILGKKNMK-IGAMEERLKHQKVLIIIDDLDDQDVLDAL 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+I+ T++K  L+    +  Y         A ++FC++AF  +      
Sbjct: 312 VGRTQWFGSGSRIIVVTKNKHFLRAHGIDHVYEACLPSEELALEMFCRYAFRKNSPPDGF 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL+ +    A  +PL LKVLG YL GR  E W   M +L+     +IE+ L++SYD L+
Sbjct: 372 MELSSEVALRAGNLPLGLKVLGSYLRGRDIEDWMDMMPRLQNDLDGKIEKTLRVSYDGLN 431

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDASKSLINLDL---------FYR---IRMHDLL 419
           + + + +F  IAC   GE  +++  +   S   +N+ L         F R   I MH LL
Sbjct: 432 NKKDEAIFRHIACLFNGEKVNDIKLLLAESDLDVNIGLKNLVDKSLIFVREDTIEMHRLL 491

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +DMG+EIVR +S N PG+R  L   K IY VL+ NTGT+ + GI+LD+N+ +  ++++  
Sbjct: 492 QDMGKEIVRAQS-NEPGEREFLVDSKHIYDVLEDNTGTKKVLGIALDINETDG-LYIHES 549

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICAEKLVS 534
           AF  M  L FL FY  + K +  HL EG      ++R L W + PL+ +  N   E LV 
Sbjct: 550 AFKGMRNLLFLNFYTKQKKDVTWHLSEGFDHLPPKLRLLSWEKYPLRCMPSNFRPENLVK 609

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
           L+M  +K+E+LWD V     SL   +     ++   + L+ +PD     NL+ L V   T
Sbjct: 610 LQMCESKLEKLWDGVH----SLTGLR---NMDLRGSENLKEIPDLSLATNLKKLDVSNCT 662

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ EL  ++  L+ ++ L +    NLE +P  I +L  L  L ++ C +L++ P++   +
Sbjct: 663 SLVELSSTIQNLNQLEELQMERCENLENLPIGI-NLESLYCLNLNGCSKLRSFPDISTTI 721

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
             L     T++E+ P  L  + ++ Y+ L
Sbjct: 722 SELYLSE-TAIEEFPTEL-HLENLYYLGL 748



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 54/223 (24%)

Query: 554 SSLCTFKTPITFEIID------CKMLERLPDELENLEYLTVKGTTIRELP---ESLGRLS 604
           ++L T  T +  E+++      C  L   PD   N+  L + GT I E+P   E   RLS
Sbjct: 807 TNLETLPTGVNLELLEQLDFSGCSRLRSFPDISTNIFSLVLDGTGIEEVPWWIEDFYRLS 866

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-----TLPELPCNLGLLSARNC 659
           ++  +     +NL+ +  +I  L KL  +  S CE L      T+P        ++  N 
Sbjct: 867 FLSMI---GCNNLQGVSLNISKLEKLETVDFSDCEALSHANWDTIPSAVA----MATENI 919

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
            S  KLP         + +   N   LD               ++  ++ I K +   G 
Sbjct: 920 HS--KLP---------VCIKFSNCFNLD-------------HKAVLLQQSIFKQLILSGG 955

Query: 720 EIPKWFRHQSMGSSAT----LKTRPPRPAGYNKLISFAFCAVV 758
           E+  +F H++ G+S T    L   P +P        F  CA+V
Sbjct: 956 EMFSYFTHRTTGTSLTNIPLLHISPCQP-----FFRFRACALV 993


>gi|280967726|gb|ACZ98532.1| TNL [Malus x domestica]
          Length = 990

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 259/889 (29%), Positives = 410/889 (46%), Gaps = 159/889 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+ FTSHLH  L  +  + FID D L RG+ I + L   IE S I++I
Sbjct: 19  YDVFLSFRGEDTRNGFTSHLHEALKNRGYQVFIDEDGLERGEEIKEKLFRAIEESRISLI 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S W                      FY VDPSH+RKQ+      F +  K  
Sbjct: 79  VFSKMYADSSWCLDELVKIMECRDKLGRHVLPIFYHVDPSHIRKQNGDLAEAFQKHEKDI 138

Query: 100 ------------PEKMKRWKNALTEAADLSGFDSNVI--RPESKLIEEIAND-VLKRLDA 144
                        E++K+W+ ALT+AA+LSG    +   R E++ I++I ++ + K L  
Sbjct: 139 HEEKDDKEREAKQERVKQWREALTKAANLSGHHLQIANNRREAEFIKKIVDESIWKWLPI 198

Query: 145 TFQ-SKNKGLVGVECSIEEI-ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHF 202
           T +    K LVG++  I+ I   L   GS  V  + IWG+GG+ K T A A++N+I   F
Sbjct: 199 TNELPVTKHLVGIKSRIQGIINDLSSGGSNDVLMVGIWGMGGLGKTTAAKAIYNQIHPMF 258

Query: 203 EGSYFALNVREAEETGGIKDLQKKLLSELSKD-GNMRNIESQLN----RLARKKVRIVFD 257
           +   F  +  ++     +  LQ KL+ ++ K+   +R ++  +N    +   ++V ++ D
Sbjct: 259 QFKSFLADNSDSTSKDRLVYLQNKLIFDILKEKSQIRCVDEGINLIKQQFQHRRVLVIMD 318

Query: 258 DVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQW 301
           ++                  GSR+IITTRD+++L N   +K Y ++E+   +A +LF   
Sbjct: 319 NIDEEVQLCAIAGSRDWFGPGSRIIITTRDERLLLN--VDKVYPLQEMNEDEAMELFSWH 376

Query: 302 AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIE 361
           AFG    +  ++ L+   + Y  G+PLAL+VLG +L  R+   W+S + KL+  P+ +I 
Sbjct: 377 AFGNRWPNEEYLGLSKNVVSYCGGLPLALEVLGSFLFKRTIAEWKSQLEKLKRAPYEKII 436

Query: 362 EVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRD 421
             L+IS++ LDD +K +FLDI+CF  G+ +D +  I D+      + +        +LR+
Sbjct: 437 NPLRISFEGLDDKEKAIFLDISCFFIGKDKDYIAKILDSCGFSATIGI-------SVLRE 489

Query: 422 MGREIVRKESI-NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
                V      + PGK +RLW+ +++  VL  N+GT  IEG++L +          + A
Sbjct: 490 RCLITVEDNKFPDQPGKWSRLWNRQEVTDVLTNNSGTGKIEGLALRLPYDYGNTSFITKA 549

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN---ICAEKLVSLKM 537
           F+KM KLR L  Y         HL      E+R L W  C LK++       +KLV L+M
Sbjct: 550 FAKMKKLRLLMLYAVDLNGEYKHLP----KELRVLNWIFCRLKSIPDDFFNQDKLVVLEM 605

Query: 538 PCTKVEQLWD-----------------------DVQRLPS-------------------- 554
             + + Q+W+                       D  ++P+                    
Sbjct: 606 RRSSLVQVWEGSKSLHNLKTLDLSSSWYLQKSPDFSQVPNLEELILQSCYSLSEIHPSIG 665

Query: 555 ---SLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKR 608
               L   K+  T  +  C     L +   E+ +L  L    T IRE+P S+  L  + R
Sbjct: 666 HLKRLSLSKSVETLLLTGCFDFRELHEDIGEMISLRTLEADHTAIREVPPSIVGLKNLTR 725

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
           L L  N N  R   ++  LSKL  L+++    L T+ +LP NL +L A +C +LE +P  
Sbjct: 726 LSL--NGNKFRSLPNLSGLSKLETLWLNASRYLCTILDLPTNLKVLLADDCPALETMP-D 782

Query: 669 LSSMSSVLYVNLCNFLKL----------------DPNELSEIVKD-------GWMKHSLY 705
            S MS++  +++ +  KL                D    + +  D       GW    L 
Sbjct: 783 FSEMSNMRELDVSDSAKLTEVPGLDKSLNSMVWIDMKRCTNLTADFRKNILQGWTSCGL- 841

Query: 706 EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAF 754
                   +   GN +P WF   + G+  +    P     +  L  F  
Sbjct: 842 ------GGIALHGNYVPDWFAFVNEGTQVSFDILPTDDHNFKGLTLFCL 884


>gi|297833730|ref|XP_002884747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330587|gb|EFH61006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 975

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 256/834 (30%), Positives = 409/834 (49%), Gaps = 121/834 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++DVF SF GED R  F SHL   L  K I  F D ++ R  +I   L+  I  S IAI+
Sbjct: 9   VFDVFPSFSGEDVRRTFLSHLLLALDRKLITCFKDSEIQRSQSIGLELVHAIRGSRIAIV 68

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY +DPSHVRKQ+  FG+ F  + +  
Sbjct: 69  VFSKIYASSSWCLNELLEIVKCKEEKGQMVIPIFYALDPSHVRKQTGDFGKAFEMICESK 128

Query: 100 PEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVE 157
            ++++ +W+ ALT+ A++ G+ S     E+ LIEEIANDVL +L+    S      VG+E
Sbjct: 129 TDELQIQWRRALTDVANIHGYHSENWYNEAHLIEEIANDVLGKLNNVTPSMEFLDFVGIE 188

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREA 214
             + ++  LLC+ SE V  + +WG  GI K TIA A+F +ISRHF+ S F   A   +  
Sbjct: 189 DHLAKMSLLLCLESEQVRMVGLWGPSGIGKTTIARALFIRISRHFQSSVFIDRAFVSKTM 248

Query: 215 EETGGIKD--------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--- 261
           E   G           LQ+  LSE+   KD  + ++ +   RL  KKV IV DD+     
Sbjct: 249 EIFRGANPDDYNMKLHLQENFLSEILNKKDIKVHHLGAVGERLKHKKVLIVLDDLDDQIV 308

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+++ T+DK +L+    ++ Y++    +  A ++FCQ+AF  +  
Sbjct: 309 LDALVGGTQWFGCGSRILVITKDKHLLRAHGIDRIYKVGPPSHKLALEMFCQYAFRQNSP 368

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
                EL  +  K A  +PLAL V G YL GR  E W   + +L   P+ +IE+ L++SY
Sbjct: 369 REGFAELASEVTKGAGNLPLALNVFGLYLRGRDIEDWLDMLPRLRKGPYGKIEKALRVSY 428

Query: 369 DSLDDSQ-KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRM 415
           D L   + K +F  IAC   G   +++  +   S        K+LI+  L +     + +
Sbjct: 429 DGLGSKEDKAIFCHIACLFNGMEANDIKLLLADSDLEVNIGLKNLIDNSLIHERGSTVHI 488

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H L+++MG+EI+R +S N P +R  L   KDI  V    +G + + G+SL + + ++ +H
Sbjct: 489 HCLVQEMGKEIIRTQS-NKPREREFLVDSKDIGDVFNDTSGAKKVLGLSLSLAEFDK-LH 546

Query: 476 MNSYAFSKMPKLRFLRFYGDK----NKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NI 527
           ++  AF +M  LRFLR Y D     N+  +    G+ +   +++ L W   P+++L  + 
Sbjct: 547 IDKRAFKRMRNLRFLRIYEDSLDLHNQVRLHLPGGLSYFPPKLKLLCWDGYPMRSLPASF 606

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQ---------RLPSSLCTFKTPITFEIIDCKMLERLPD 578
            AE L  L+M  +K+E+LW+ V+          LPSSL          +  C  L  L  
Sbjct: 607 RAEHLNVLRMRNSKLEKLWEGVESSAYPEDRVELPSSLRNLN---ELYMQTCSELVALSA 663

Query: 579 --ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
              LE+L  L + G +     P     +S+   LIL N + ++ +P  I + S+L  L +
Sbjct: 664 GINLESLYRLDLGGCSRFWGFPYISKNVSF---LIL-NQTAIKEVPWWIENFSRLICLEM 719

Query: 636 SHCERLQTLPELPCNLGLLSARNCTSLEKL--------PAGLSSMSSVLY-----VNLCN 682
             C+RL+ +      L LL   + ++ E L        P+ +++  + +Y     +N  N
Sbjct: 720 RECKRLRYISPKISKLKLLEKVDFSNCEALTSASWLDGPSAVATGGNNIYTKLPVLNFIN 779

Query: 683 FLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
             KLD   L               ++ + K +  PG E+P +F +++ GS+  +
Sbjct: 780 CFKLDQEALV--------------QQSVFKYLILPGREVPLYFTNRATGSTLAI 819


>gi|295083303|gb|ADF78105.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 375/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENI 729


>gi|356514972|ref|XP_003526175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1158

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 264/834 (31%), Positives = 398/834 (47%), Gaps = 166/834 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+NFT+ L   L    I  F DD  L +G++I+  LL  I+ S + ++
Sbjct: 23  YDVFVSFRGEDTRNNFTAFLFDALFENGIHAFKDDTHLQKGESIAPELLLAIQGSRLFVV 82

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASS W                       FY VDPS VRKQS  +G  F+   +R
Sbjct: 83  VFSKNYASSTWCLRELAHICNCTIEASPSRVLPIFYDVDPSEVRKQSGYYGIAFAEHEER 142

Query: 99  F------PEKMKRWKNALTEAADLSGFDSNVIRPESK--LIEEIANDVLKRLDATFQSKN 150
           F       E+++RW+ ALT+ A+LSG+D   IR +S+  +I+EI   +   L   FQ+  
Sbjct: 143 FREDKVKMEEVQRWREALTQMANLSGWD---IRNKSQPAMIKEIVQKINYILGPKFQNLP 199

Query: 151 KG-LVGVECSIEEIESLLCIGSEGVCKLRIWGI---GGISKITIAGAVFNKISRHFEGSY 206
            G LVG+E  +EE+E   C+  E V  +R+ GI   GGI K T+A A++ KI+  ++   
Sbjct: 200 SGNLVGMESRVEELEK--CLALESVTDVRVVGISGMGGIGKTTLALALYEKIAYQYD--- 254

Query: 207 FALNVREAEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT 260
              +V +  +  G   +QK+LL +   D N+      R       RL  K+  IV D+V+
Sbjct: 255 ---DVNKIYQHYGSLGVQKQLLDQCLNDENLEICNVSRGTYLIGTRLRNKRGLIVLDNVS 311

Query: 261 S---------------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
                                 GSR+II +RD+ +L+    N  YR++ L   +A +LFC
Sbjct: 312 QVEQLHMFTGSRETLLRECLGGGSRIIIISRDEHILRTHGVNHVYRVRPLNQDNAVQLFC 371

Query: 300 QWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE 359
             AF  D++ + +  LT  A+ +AQG PLA+KV+G  L G     WE  + +L       
Sbjct: 372 NNAFKCDYIMSDYKMLTHDALWHAQGHPLAIKVIGKSLFGLDVSQWEGTLVRLSENKSKN 431

Query: 360 IEEVLKISYDSLDDSQKNVFLDIACFLEGEH--RDEVISIFD-------------ASKSL 404
           I +V++ISYD+L++  K +FLDIACF  G+H   D V  I +               KSL
Sbjct: 432 IMDVIRISYDALEEKDKEIFLDIACF-SGQHYFEDNVKEILNFRGFNSEIGLQILVDKSL 490

Query: 405 INLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGIS 464
           I +  + +I MHDLLRD+G+ IVR++S   P K +RLW  +D+Y+ +  N   + +E I 
Sbjct: 491 ITIS-YGKIYMHDLLRDLGKCIVREKSPKEPRKWSRLWDCEDLYKFMSSNKEAKNLEAIV 549

Query: 465 L-DMNKVNREIHMNSYAFSKMPKLRFL---RFYGDKNKCMVSHLEGVPFA--------EV 512
           + D   +  E  M   A SKM  L+ L   R+Y       +S +E   F+        E+
Sbjct: 550 VEDEPGMFSETTMRFDALSKMKNLKLLILPRYYEKG----LSTIEEEKFSGSLNYLSNEL 605

Query: 513 RHLEWPQCPLKTLNICAE--KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDC 570
            +L W   P   L  C +   LV L +  + ++ LWD  Q +P+            + DC
Sbjct: 606 GYLIWHFYPFNFLPKCFQPHNLVELNLSGSNIQHLWDSTQPIPNLR-------RLNVSDC 658

Query: 571 KMLERLPD-ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE------ 622
             L  + D E  NLE L ++G   +R++  S+G L  +  L L    +L  +P       
Sbjct: 659 DNLIEVQDFEDLNLEELNLQGCVQLRQIHPSIGHLKKLTHLNLKYCKSLVNLPHFVEDLN 718

Query: 623 -----------------SIRHLSKLTFLFISHCERLQTLPELPCNLGL------------ 653
                            SI H  KLT L + +C+ L  LP    +L L            
Sbjct: 719 LEELNLQGCVQLRQIHPSIGHPKKLTHLNLKYCKSLVNLPHFVGDLNLKELNLEGCVQLR 778

Query: 654 --------------LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
                         L+ ++C SL   P+ +  +SS+ Y++L     L   +LSE
Sbjct: 779 QIHPSIGHLRKLTVLNLKDCKSLISFPSNILGLSSLTYLSLFGCSNLHTIDLSE 832


>gi|295083331|gb|ADF78119.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 261/755 (34%), Positives = 376/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  S+G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGSYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +  +  D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSVELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENI 729


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 239/752 (31%), Positives = 378/752 (50%), Gaps = 86/752 (11%)

Query: 30  IKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW------------------ 71
           I  FID+++ RG++I   L+  I  S I++I+ S+ YASS+W                  
Sbjct: 8   ITPFIDNEIKRGESIGPELIRAIRESRISVILLSKNYASSKWCLDELVEIMKCREELGQT 67

Query: 72  ---FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEKMKRWKNALTEAADLSGFDSNVIRPE 127
               FY+VDPS V+K   +FG+ F +    +  E + RW+ AL + A ++G+ S+    E
Sbjct: 68  VVAIFYKVDPSEVKKLIGNFGQVFRKTCAGKTKEDIGRWREALAKVATIAGYHSSNWDNE 127

Query: 128 SKLIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS 186
           + +I++I  D+   L+ +  S +  GLVG+   +E++E LLC+ S+ V  + IWG  GI 
Sbjct: 128 AAMIKKIVTDISNMLNNSISSSDFDGLVGMRAHLEKMEPLLCLESDEVRMIGIWGPPGIG 187

Query: 187 KITIAGAVFNKISRHFEGSYFALNVRE------AEETGGIKDLQKKLLSEL--SKDGNMR 238
           K TIA  V+N+ S  F+   F  N++       +++      LQK  +S++   KD  + 
Sbjct: 188 KTTIARVVYNQFSNSFQLGVFLDNIKANYTRPCSDDYSSKLQLQKHFMSQIINHKDMEIF 247

Query: 239 NIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANK 282
           ++    +RL  KKV +V D V                  GSR+IITT+D ++ +    N 
Sbjct: 248 HLGVAQDRLKDKKVLVVLDGVNQSVQLDAMVKETWWFGPGSRIIITTQDHRLFRAHGINH 307

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y++      +A ++FC +AFG         EL  +   +A  +PL L+VLG +  G SK
Sbjct: 308 IYQVDFPPADEALQIFCMYAFGQKSPKDGFEELAWEVTTFAGKLPLGLRVLGSHFRGMSK 367

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIAC-----------------F 385
           + W  ++ +L+     +I+ +LK SYD+LDD  K++FL IAC                 F
Sbjct: 368 QEWIKSLPRLKTSLDTDIQSILKFSYDALDDEDKDLFLHIACFFNYGVIEKVEEHLARKF 427

Query: 386 LEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHK 445
           LE   R  V+S     KSLI  +   RI MH LL  +GREIVRK SI+ PG+R  L   +
Sbjct: 428 LEVRQRLNVLS----QKSLILFNQCGRIEMHSLLEKLGREIVRKLSIHDPGQRQFLVDER 483

Query: 446 DIYQVLKKN-TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHL 504
           +I +VL  +  G+++I GI L+   +  E++++  AF  M  L+FLR  GD N   +S  
Sbjct: 484 EICEVLISDAAGSKSIIGIDLNYRGIGEELNISERAFEGMCNLQFLRIDGDCNTLQLSQG 543

Query: 505 EGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTP 562
                 ++R L W   P+  L  N+  E LV L M  +K+E+LW+ ++ L       +  
Sbjct: 544 LNYFSRKLRILHWSYFPMACLPSNVNLEFLVELIMDNSKLEKLWEGIKPL-------RNL 596

Query: 563 ITFEIIDCKMLERLPD--ELENLEYLTVK-GTTIRELPESLGRLSWVKRLILSNNSNLER 619
              ++ D   L+ LPD     NL+ L +   +++ +LP S+G  + +K+L L   SN+  
Sbjct: 597 KRMDMRDSANLKELPDFSTATNLQKLNLSYCSSLIKLPSSIGNATNLKKLNLRRCSNIME 656

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR---NCTSLEKLPAGLSSMSSV- 675
            P  I   + L  L +S C  L  LP    NL  L       C+ L+ LP  ++  S V 
Sbjct: 657 FPSFIEKATNLEILDLSSCSNLVELPLFIKNLQKLQKLRLGGCSKLQVLPTNINLESLVE 716

Query: 676 LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE 707
           L +  C+ LKL P E+S  V+   +  +  EE
Sbjct: 717 LDLTDCSALKLFP-EISTNVRVLKLSETAIEE 747



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 36/219 (16%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLG------- 601
           +Q LP+++   ++ +  ++ DC  L+  P+   N+  L +  T I E+P S+        
Sbjct: 702 LQVLPTNI-NLESLVELDLTDCSALKLFPEISTNVRVLKLSETAIEEVPPSIAFWPRLDE 760

Query: 602 -RLSWVKRL------------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
             +S+ + L            +  +++ ++ +P  ++ +S+L  L +  C +L++LP++P
Sbjct: 761 LHMSYFENLKELPHALCSITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIP 820

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER 708
            +L ++ A +C SLE+L     +    L    C   KL+      I++    +H++    
Sbjct: 821 ESLSIIDAEDCESLERLDCSFHNPKICLKFAKC--FKLNQEAKDLIIQTPTSEHAI---- 874

Query: 709 GIKKSMYFPGNEIPKWFRHQSM-GSSATLK-TRPPRPAG 745
                   PG E+P +F H+S  G S T+K    P P  
Sbjct: 875 -------LPGGEVPSYFTHRSTSGGSLTIKLNEKPLPTS 906


>gi|224123350|ref|XP_002319057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857433|gb|EEE94980.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 511

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 203/516 (39%), Positives = 282/516 (54%), Gaps = 71/516 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I TF DD +L +G+ IS  LL  I+ S I+I+
Sbjct: 1   YDVFLSFRGEDTRKNFTDHLYTALQKAGILTFQDDDELPKGEEISSHLLKAIKESNISIV 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY +DPS +RKQ+ SF   F R  +RF
Sbjct: 61  VFSKGYASSTWCLDELSEILDCRQTARQIFLPVFYDIDPSDIRKQTGSFAEAFDRHEERF 120

Query: 100 PEKM---KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E+M   ++ KNAL EAA LSGFD + I    ESKLI+ I  +VL +L+  +       V
Sbjct: 121 KEEMEKVQKLKNALVEAASLSGFDLHSIANGHESKLIQMIVEEVLSKLNPRYMKVATYPV 180

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G++  +++I S+LC+G+  V  + I+G+ GI K TIA AVFN+I   FEGS   LN+RE 
Sbjct: 181 GIDSQVKDIISMLCVGTNEVRIVGIYGMPGIGKTTIAKAVFNQICHQFEGSSCLLNIRER 240

Query: 214 --------AEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS---- 261
                     +   ++D  K  +  +  D +   I+SQ     RK+V ++ DDV      
Sbjct: 241 LDQHRGLLQLQQQLLRDAFKGYI-RIHDDDDEDGIKSQF---CRKRVLVILDDVDQLKHL 296

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR++ITTRD+++L      K+Y  + L   ++ +LF   AF   H  
Sbjct: 297 RGLAGERDWFGPGSRIVITTRDERLLTRLEVEKQYHAEGLNNDESLQLFSWHAFKKPHPM 356

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI-IPHVEIEEVLKISY 368
             ++EL+   + Y  GVPLAL+VLG  L  RS   W S + KL+  +PH +I+  L  S 
Sbjct: 357 KEYVELSKVVVDYVGGVPLALEVLGSKLFKRSITHWRSFIEKLQKHLPH-QIQRQLITSL 415

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D LD   K +FLDIACF  G  +D V  I D               +SL+ ++    ++M
Sbjct: 416 DDLDGEVKGMFLDIACFFNGMDKDYVGKILDGRGFYPEMGFDILRERSLLTVNSENELQM 475

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
            +LLRDMGREI+ + + NHPGKR+RLWH +DI  VL
Sbjct: 476 DNLLRDMGREIIHQMAPNHPGKRSRLWHREDIMDVL 511


>gi|356499237|ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 268/779 (34%), Positives = 391/779 (50%), Gaps = 115/779 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR +FT HL+  L  K I  F DD QL +GD I++ L   IE S  AI+
Sbjct: 15  YHVFLSFRGEDTRLDFTDHLYAALVRKGIIAFRDDKQLEKGDAIAEELPKAIEESLGAIV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQ-SHSFGRHFSRLRKR 98
           I SE YASS W                      FY V P  V+ Q + SF   F +  +R
Sbjct: 75  ILSENYASSSWCLDELNKILESNRVLGREVFPVFYGVSPGEVQHQKTQSFYEAFKKHERR 134

Query: 99  F---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                EK+++W+++L E   + G++S   + +++LIE I   V  +L     S N GL+G
Sbjct: 135 SGKDTEKVQKWRDSLKELGQIPGWESKHYQHQTELIENIVESVWTKLRPKMPSFNDGLIG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           +   +++++SLL I SE V  + IWG+GGI K T+A  VF KI   F+ S F  NVRE +
Sbjct: 195 IGSRVKKMDSLLSIESEDVRFIGIWGMGGIGKTTVARVVFQKIKDQFDVSCFLDNVREIS 254

Query: 215 EETGGIKDLQKKLLSELSKDG--------------------------NMRNIESQLNRLA 248
            ET G+  LQ KLLS L+  G                          +  +  SQL  LA
Sbjct: 255 RETNGMLRLQTKLLSHLAIKGLEIIDLDEGKNTIINLLSEKKVLLVLDDVDDTSQLGNLA 314

Query: 249 RKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
           ++      +    GSRVIITTRD QVL +    + Y ++ L   ++ +L  Q AF  D  
Sbjct: 315 KR-----VEWFGRGSRVIITTRDTQVLISHGVVENYNIEFLNSDESLQLLSQKAFKRDEP 369

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKIS 367
              ++EL+    K+A G+PLAL++LG +LCGRS+  W   +  + E+     + + L+IS
Sbjct: 370 LEHYLELSKVVAKHAGGLPLALELLGSFLCGRSEFQWREVVDMIKEVSASHIVMKSLRIS 429

Query: 368 YDSLDDSQKNVFLDIACFLEG---EHRDEVISIFD----------ASKSLINLDLFYRIR 414
           Y+ L    K +FLDIACF +G   E   + + I D            KSL   D F  I 
Sbjct: 430 YNGLPRCHKALFLDIACFFKGRVKELATQTLEICDRYPAVGIELLVEKSLATYDGF-TIG 488

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDLL++  REIV +ES    GKR+RLW  +D  QVLK +   E+IEGI+L+  + + E 
Sbjct: 489 MHDLLQETAREIVIEESHVDAGKRSRLWSLEDTNQVLKYSRENESIEGIALNSPEKD-EA 547

Query: 475 HMNSYAFSKMPKLRFLRF-----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT--LNI 527
           + +  AFS+M  LR L            KC+ S L        + L+W    L+T  L +
Sbjct: 548 NWDPEAFSRMYNLRLLIISFPIKLARGLKCLCSSL--------KFLQWNDFSLETLPLGV 599

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQR--------LPSSLCTFKTPITFEIIDCKMLERLPDE 579
             ++LV LKM  +K++ +W+  Q         L  S    +TPI   +     LER+   
Sbjct: 600 QLDELVELKMYSSKIKNIWNGNQAFAKLKFIDLSYSEDLIQTPI---VSGAPCLERM--- 653

Query: 580 LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                 L +    + E+  S+G+   +  L + N  NL+ +P  +  +  L  L +S C 
Sbjct: 654 ------LLIGCINLVEVHPSVGQHKRLVVLCMKNCKNLQIMPRKL-EMDSLEELILSGCS 706

Query: 640 RLQTLPELPCN---LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSE 693
           +++ LPE   N   L LLS  NC +L  LP  + ++ S+  +N+  C+ L   PN L+E
Sbjct: 707 KVKKLPEFGKNMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGCSRLSTLPNGLNE 765



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 87/237 (36%), Gaps = 67/237 (28%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKGTTIREL------------ 596
           LP+S+C  K+     I  C  L  LP+ L   E+LE L V GT IRE+            
Sbjct: 735 LPNSICNLKSLRKLNISGCSRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKE 794

Query: 597 ----------PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL----------FIS 636
                     P S   L W+ + +   N     +P     L+ ++            F S
Sbjct: 795 LSFGGRKELAPNSQNLLLWISKFMRQPNLKESTMPPLSSLLALVSLDLSYCDLNDESFPS 854

Query: 637 HCERLQTL------------PELPCNLGL-----LSARNCTSLEKLPAGLSSMSSVLYVN 679
           H   L  L            P   C + L     LS  +C  LE LP    ++   LY N
Sbjct: 855 HLGSLSLLQDLDLSGNNFVNPPAQCIINLSMLQNLSFNDCPRLESLPVLPPNLQG-LYAN 913

Query: 680 LCNFLKLDPNELSEIVKDGWMKHSLYEER-------GIKKSMYFPGNEIPKWFRHQS 729
            C   KL P  L E      M   +YE +       G +     PGNEIP WF +Q+
Sbjct: 914 NCP--KLKPFNLDE-----EMLWKIYETQSRMDPIEGPEVWFIIPGNEIPCWFDNQN 963


>gi|357499601|ref|XP_003620089.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495104|gb|AES76307.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1079

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 278/924 (30%), Positives = 423/924 (45%), Gaps = 182/924 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  K I+TF+DD +L  G+ I+ SL   IE S I I 
Sbjct: 20  YDVFLSFRGSDTRYRFTGNLNRALCDKGIRTFMDDRELQGGEEITSSLFKAIEESRIFIP 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY V+PSHVR  + S+G+      K+F
Sbjct: 80  VLSINYASSSFCLDELVHIINCFKESGRLVLPIFYDVEPSHVRHHTGSYGKALDDHIKKF 139

Query: 100 P------EKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNK 151
                  E++++WK+ALT+ A+ SG  F+      E + IE+I   V  +++        
Sbjct: 140 QNNKDSMERLQKWKSALTQTANFSGHHFNPAGNGYEHEFIEKIVKYVSNKINHVPLYVAD 199

Query: 152 GLVGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
             VG+E  + ++ SL+  GS G V  L I+G GG+ K T+A AV+N ++  F+   F  +
Sbjct: 200 FPVGIESRVLKVNSLMDFGSNGEVQMLGIYGPGGMGKTTLARAVYNSLADQFDDLCFLHD 259

Query: 211 VREAEETGGIKDLQKKLLSELSK-DGNMRNIESQL----NRLARKKVRIV---FDDVTSG 262
           VR      G++ LQ KLLS+L K D  + ++   +     RL +KK+ ++   F     G
Sbjct: 260 VRGNSAKYGLEHLQGKLLSKLVKLDIKLGDVYEGIPIIEKRLHQKKLEVLAGGFRWFGPG 319

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           S VIITTRDKQ+L +    + Y++ +L   +A +L    A   + +D +   +   A+ Y
Sbjct: 320 SIVIITTRDKQLLAHHGIERAYKLHKLNEKEALELLTWKALKNNKVDTNFDSVLHHAVTY 379

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A G+PLAL+V+G  L G++   W+SA+ + E IP  +I+E+LK+S+D+L ++++NVFLDI
Sbjct: 380 ASGLPLALEVVGSNLFGKNIGEWKSALNQYERIPDKKIQEILKVSFDALGEAEQNVFLDI 439

Query: 383 ACFLEGEHRDEVISIFDA--------------SKSLINL-----DLFYRIRMHDLLRDMG 423
           AC  +G    E+  +  A               KSL+N+      L   + +H L+  MG
Sbjct: 440 ACCFKGYELKELEDVLHAHYGNCMKYQIRVLLDKSLLNIKQCQWSLTDVVTLHALIEKMG 499

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD----------------- 466
           +EIVRKES   PG+R+RLW HKDI  VL+ N G+  IE I L+                 
Sbjct: 500 KEIVRKESPKEPGRRSRLWFHKDIIDVLEANKGSSEIEIIYLECSSSEKVVVDWKGDELE 559

Query: 467 -MNKVNREIHMNSYAFSKMPK-----LRFLRF------------------YGDKNKCMVS 502
            M K+   I  N   FS  PK     LR L +                  Y + +K  + 
Sbjct: 560 KMQKLKTLIVKNG-TFSNGPKYLPNSLRVLEWQKYPSRVIPSDFSQRNFLYANYSKVTLH 618

Query: 503 HLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKM----PCTKVEQLWDDVQRLP----- 553
           HL  V F  +R L    C   T       L +L++     C  + ++   V  L      
Sbjct: 619 HLSCVRFVNMRELNLDNCQFLTRIHDVSNLSNLEIFSFQQCKNLIEIHKSVGFLNKLEVL 678

Query: 554 -----SSLCTFKTPIT------FEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPES 599
                S L +F  P+         + DCK L   P+   E+ N++ +  + T+I+E+P S
Sbjct: 679 NAEGCSKLMSF-PPLKLTSLDELRLSDCKNLNNFPEILGEMNNIKRICWENTSIKEVPVS 737

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHL-----------------SKLTFLFISHCERLQ 642
              L+ +  L +     + R+P SI  +                  KL+ +  +   RL 
Sbjct: 738 FQNLTKLLYLTIKGKG-MVRLPSSIFRMPNLSDITAEGCIFPKLDDKLSSMLTTSPNRLW 796

Query: 643 TLPELPCNLG-----------------LLSARNCTSLEKLPAGLSSMSSVLY-------- 677
            +    CNL                   LS  N T L +       +S ++         
Sbjct: 797 CITLKSCNLSDEFLPIFVMWSAYVRILDLSGNNFTILPECIKDCHLLSDLILDDCKCLRE 856

Query: 678 -----VNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPG-NEIPKWFRHQSMG 731
                +NL N    +   L+   ++  +   L+E  G  K  Y PG   IP+WF H++MG
Sbjct: 857 IRGIPLNLTNLSAANCKSLTSSCRNMLLNQDLHEAGG--KEFYLPGFARIPEWFDHRNMG 914

Query: 732 SSATLKTRPPRPAGYNKLISFAFC 755
              +   R       NKL SFA C
Sbjct: 915 HKFSFWFR-------NKLPSFAIC 931


>gi|295083307|gb|ADF78107.1| Rj2 protein [Glycine max]
 gi|295083315|gb|ADF78111.1| Rj2 protein [Glycine max]
 gi|295083317|gb|ADF78112.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 260/755 (34%), Positives = 375/755 (49%), Gaps = 118/755 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  + I TFIDD+ L  G+ I+ +LL  I+ S IAI 
Sbjct: 12  YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEITPALLKAIQESRIAIT 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY VDPS VR Q  ++G   ++ ++RF
Sbjct: 72  VLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQKGTYGEALAKHQERF 131

Query: 100 P---EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               EK++ WK AL + A+LSGF   +    E + I  I   V  +++          VG
Sbjct: 132 NHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSSKINHAPLPVADYPVG 191

Query: 156 VECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + E+  LL + S+ GV  + I GIGGI K T+A AV+N I+ HF+GS F  ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G++ LQ  LL E+   K+ N+ ++E   +    RL RKKV ++ DDV         
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRDKQ+L +    + Y ++ L   +A +L    +F  + +D S+
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+ +  + YA G+PLAL+V+G  L G+S E W+SA+++ + IP ++I E+LK+S+D+L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR-----I 413
           + QKNVFLDIAC        EV  I  A               KSLI     +      +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHDL+ DMG+EIVR+ES   P KR+RLW  +DI  VL+ N GT  IE I LD    ++E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 474 ---IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
              + +N+ AF KM  L+ L     K      +L       +R LEW + P   L  +  
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPN----NLRVLEWWRYPSHCLPSDFH 607

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENL 583
            +KL   K+P + +     D          +K  +   I++   C+ L ++PD   L NL
Sbjct: 608 PKKLAICKLPFSCISSFELD--------GLWKMFVNLRILNFDRCEGLTQIPDVSGLPNL 659

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           E  + +                          NL  +  SI  L KL  L    C+RL++
Sbjct: 660 EEFSFECCF-----------------------NLITVHNSIGFLDKLKILNAFRCKRLRS 696

Query: 644 LPELPCNLGLLSARN---CTSLEKLPAGLSSMSSV 675
            P  P  L  L   N   C SLE  P  L  M ++
Sbjct: 697 FP--PIKLTSLEKLNLSFCYSLESFPKILGKMENI 729


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 379/775 (48%), Gaps = 117/775 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           M+DVFLSFRG++TR+NFTSHL+  L  + I  ++DD +L RG  I  +L   IE S  ++
Sbjct: 13  MHDVFLSFRGKETRNNFTSHLYSNLKQRGIDVYMDDRELERGKAIEPALWKAIEESRFSV 72

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHV----RKQSHSFGRHFSR 94
           IIFS  YASS W                      FY VDPS V    RK   +FG H   
Sbjct: 73  IIFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEVTERKRKYEEAFGEHEQN 132

Query: 95  LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            ++   EK++ WK+ L+  A+LSG+D    R ES+ I+ IA  +  +L  T  + +K LV
Sbjct: 133 FKENL-EKVRNWKDCLSTVANLSGWDIRN-RNESESIKIIAEYISYKLSVTMPTISKKLV 190

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  +E +     IG EG                  G           G       RE 
Sbjct: 191 GIDSRVEVLNGY--IGEEG------------------GKAIFIGICGMGGIGKTTVARE- 229

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
                 + L + L+   S   + R IE    R   KK+  + DDV               
Sbjct: 230 ------QLLSEILMERASVWDSYRGIEMIKRRSRLKKILHILDDVDDKKQLEFFAAEPGW 283

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IIT+RD  VL      K Y  ++L   DA  LF Q AF  D  D   +EL+ +
Sbjct: 284 FGPGSRIIITSRDTNVLTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPDEDFVELSKQ 343

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YA G+PLA++V+G +L  RS   W  A+ ++  IP  +I +VL+IS+D L +S K +
Sbjct: 344 VVGYANGLPLAIEVIGSFLYARSIPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDKKI 403

Query: 379 FLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGRE 425
           FLDIACFL G   D +  I ++              +SLI++    ++ MH+LL+ MG+E
Sbjct: 404 FLDIACFLMGFKIDRITRILESRGFHAGIGIPVLIERSLISVS-RDQVWMHNLLQIMGKE 462

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR ES   PG+R+RLW ++D+   L  +TG E IE I LDM  + +E   N  AFSKM 
Sbjct: 463 IVRCESPEEPGRRSRLWTYEDVCLALMDSTGKEKIEAIFLDMPGI-KEAQWNMEAFSKMS 521

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
           KLR L+     N   +S        ++R LEW   P K+L   +  ++LV L M  +++E
Sbjct: 522 KLRLLKI----NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSRIE 577

Query: 544 QLWD--------DVQRLPSSLCTFKT------PITFEII--DCKMLERLPDEL---ENLE 584
           QLW          +  L +SL   KT      P    +I   C  L  +   L   + LE
Sbjct: 578 QLWYGCKSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLSEVHPSLARHKKLE 637

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC--ERL 641
           Y+T+    +IR LP +L  +  +K  IL   S LE+ P+ + +++KLT L +      +L
Sbjct: 638 YVTLMDCVSIRILPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKL 696

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
            +       L +LS  NC +LE +P+ +  + S+  ++L  C+ L+  P  L ++
Sbjct: 697 SSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKV 751



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 16/166 (9%)

Query: 574 ERLPD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           +RLP    L +LE L +    +RE  LPE +G LS +K L LS N N   +PESI  LS 
Sbjct: 795 DRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQN-NFVSLPESINQLSG 853

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
           L  L +  C  L++LPE+P  +  ++   C  L+++P  +   SS        F+ L+  
Sbjct: 854 LEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIKLSSS----KRSEFICLNCW 909

Query: 690 ELSEIVKDGWMKHSLYEE--RGIKK-----SMYFPGNEIPKWFRHQ 728
            L E         ++ E   +G+        +  PGNEIP WF HQ
Sbjct: 910 ALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQ 955


>gi|224144390|ref|XP_002325273.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862148|gb|EEE99654.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 542

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 200/517 (38%), Positives = 291/517 (56%), Gaps = 67/517 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I+ F  DD L RG+ IS  LL  I+ S I+I+
Sbjct: 14  YDVFLSFRGEDTRKTFTDHLYTALVQAGIRAFRDDDDLPRGEEISDHLLRAIQESKISIV 73

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF + F +  KR
Sbjct: 74  VFSKGYASSRWCLNELVEILECKKRKTGQIVLPIFYDIDPSDVRKQTGSFAKAFDKHEKR 133

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL +AA+LSG   N +    E+K I+ I NDVL +L        + LVG
Sbjct: 134 FEEKLVKEWRKALEDAANLSGRSLNDMANGHEAKFIKGIINDVLNKLRRECLYVPEHLVG 193

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++ +  +I   L   ++ V  + I G+ GI K T+A  VFN++   FEGS F  N+ E+ 
Sbjct: 194 MDLA-HDIYDFLSTATDDVRIVGIHGMPGIGKTTLAKVVFNQLCYRFEGSCFLSNINESS 252

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++SK    N+  ++       +RL RK+V +V DDV         
Sbjct: 253 KQVNGLVPLQKQLLHDISKQDVANINCVDRGKVMIKDRLCRKRVLVVADDVAHLEQQNAL 312

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  +L+   A++ Y+++EL   ++ +LF   AF        +
Sbjct: 313 MGERSWFGPGSRVIITTRDSNLLRE--ADRTYQIEELKPDESLQLFSCHAFKDSKPAKDY 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           I+L+  A+ Y  G+PLAL+V+G  L G++++ W+  + KL  IP+ +I+  L+IS+D+LD
Sbjct: 371 IKLSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPNHDIQGRLRISFDALD 430

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
             + +N FLDIACF     ++ V  +  A               +SLI +D   +I MHD
Sbjct: 431 GEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHGRSLIKVDAIGKITMHD 490

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           LLRDMGRE+VR+ S   PGKR R+W+ +D + VL++ 
Sbjct: 491 LLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQ 527


>gi|15238808|ref|NP_197338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005162|gb|AED92545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 266/842 (31%), Positives = 390/842 (46%), Gaps = 142/842 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R  F SH+      K I  FIDD++ RG++I   L   I  S IAI++
Sbjct: 61  HQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAIVL 120

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY+VDPS VRKQ+  FG+ F +    + 
Sbjct: 121 LSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVGKT 180

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E  +RW  AL + A++ G DS     E+ +I ++A DV   L  T        VG+   
Sbjct: 181 QEVKQRWSRALMDVANILGQDSRKWDKEADMIVKVAKDVSDVLSYTPSRDFDDYVGIRPH 240

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA----- 214
           I  I SLLC+ S  V  + I G  GI K TIA  ++++IS  F+ S F  N+R +     
Sbjct: 241 ITRINSLLCLESSDVRMIGILGPPGIGKTTIARVLYDQISEKFQFSAFIENIRLSYWKGW 300

Query: 215 EETGGIK--------------DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDD 258
            + G +               +LQ++LLSEL   KD  +R++ +   RL   KV ++ D 
Sbjct: 301 HDEGNLDFPVEIMTGDRQRKLNLQRRLLSELFNQKDIQVRHLGAVQERLRDHKVLVILDG 360

Query: 259 VTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA 302
           V                  GSR+IITT+D+++L+    N  Y++      +A ++FC +A
Sbjct: 361 VDQLEQLTALAKETQWFGYGSRIIITTQDQRLLRAHEINHVYKVDLPATDEALQIFCLYA 420

Query: 303 FGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEE 362
           FG         +L  +    A  +PL L+VLG YL G S E W++A+ +L      EIE+
Sbjct: 421 FGQKFPYDGFKKLAREFTALAGELPLGLRVLGSYLRGMSLEEWKNALPRLRTSLDGEIEK 480

Query: 363 VLKISYDSLDDSQKNVFLDIACFLEG-----------------EHRDEVISIFDASKSLI 405
            L+ +Y+ L D  K++FL IAC   G                  H  EV+S    +KSLI
Sbjct: 481 TLRFAYNVLSDKDKSLFLHIACLFNGCQVNHVKQWLANSSLDVNHGFEVLS----NKSLI 536

Query: 406 NLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL 465
           + D+   +RMH LL+ +G +IVRK+SI  P KR  L    +I  V+  NTGT  I GI L
Sbjct: 537 STDMGL-VRMHSLLQQLGVDIVRKQSIGEPEKRQFLVDVNEISDVITDNTGTGTILGIML 595

Query: 466 DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA------EVRHLEWPQ 519
            ++K+   + +    F +M  L+FL      ++C+   L  +P        ++R L W  
Sbjct: 596 HVSKIEDVLVIEETVFDRMTNLQFLIL----DECLRDKL-NLPLGLNCLPRKIRLLRWDY 650

Query: 520 CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           CPL        A+ LV L M   K E+LW+ +Q L       K     E+ D + L+ +P
Sbjct: 651 CPLSIWPSKFSAKFLVELIMRANKFEKLWEGIQPL-------KNLKRMELGDARNLKEIP 703

Query: 578 DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
           D                     L   + ++ L+LS  ++L  IP SIR  + L  L +  
Sbjct: 704 D---------------------LSNATNLESLLLSFCTSLLEIPSSIRGTTNLKELDLGG 742

Query: 638 CERLQTLPELPCNLGLLSARN---CTSLEKLPAGL---SSMSSV--LYVNLCNFLKLDPN 689
           C  L  L    CN   L   N   C++L +LP  L   S+M S+  L +N  + LK  P 
Sbjct: 743 CASLVKLSSCICNATSLEELNLSACSNLVELPCALPGDSNMRSLSKLLLNGSSRLKTFP- 801

Query: 690 ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ--SMGSSATLKTRPPRPAGYN 747
           E+S  +++  +  +  EE         P + I  W R     M     LK  PP P G +
Sbjct: 802 EISTNIQELNLSGTAIEE--------VPSS-IRLWSRLDKLDMSRCKNLKMFPPVPDGIS 852

Query: 748 KL 749
            L
Sbjct: 853 VL 854



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 14/123 (11%)

Query: 614  NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
            ++  + IP+ I++LS+L  L    C +L +LP+L   L  L A NC SLE +     S  
Sbjct: 955  SNEFKTIPDCIKNLSQLHQLSFYRCHKLVSLPQLSDCLSSLDAENCVSLETIDG---SFH 1011

Query: 674  SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSS 733
            +               E  E+++    KH+L            P  E+P +F H+++G S
Sbjct: 1012 NPDIRLNFLNCNNLNQEARELIQKSVCKHAL-----------LPSGEVPAYFIHRAIGDS 1060

Query: 734  ATL 736
             T+
Sbjct: 1061 VTI 1063


>gi|15240885|ref|NP_198650.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758866|dbj|BAB09448.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006916|gb|AED94299.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1059

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 249/792 (31%), Positives = 396/792 (50%), Gaps = 105/792 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SH+      K I  FID+ + R  +I   L   I  S IAI++
Sbjct: 57  YDVFPSFHGADVRKTFLSHMLKEFKRKGIVPFIDNDIDRSKSIGPELDEAIRGSKIAIVM 116

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDP+ V+KQ+  FG+ F R    + 
Sbjct: 117 LSKNYASSSWCLNELVEITKCRKDLNQTVMTIFYGVDPTDVKKQTGEFGKVFERTCESKT 176

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E++K W+  L  AA ++G   ++   E+ +IE+I+ DV   L+ +  S++   L+G+E 
Sbjct: 177 EEQVKTWREVLDGAATIAGEHWHIWDNEASMIEKISIDVSNILNRSSPSRDFDDLIGMEA 236

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E+++SLL + S  V  + IWG  GI K TIA  ++N+ S  F  S F  N++E   T 
Sbjct: 237 HMEKMKSLLSLHSNEVKMIGIWGPSGIGKTTIARVLYNRFSGDFGLSVFMDNIKELMHTR 296

Query: 219 GIKD--------LQKKLLSELS--KDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
            +          LQ +L+SE++  K+  + ++    +RL   KV IV D +         
Sbjct: 297 PVGSDDYSAKLHLQNQLMSEITNHKETKITHLGVVPDRLKDNKVLIVLDSIDQSIQLDAI 356

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITT+D+++L+    N  Y+++     +A ++FC +AFG +      
Sbjct: 357 AKETQWFGPGSRIIITTQDQKLLEAHDINNIYKVEFPSKYEAFQIFCTYAFGQNFPKDGF 416

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L  +       +PL L+V+G +    SK+ W  A+ +L+      I+ +LK SYD+L 
Sbjct: 417 EKLAWEVTDLLGELPLGLRVMGSHFRRMSKDDWVIALPRLKTRLDANIQSILKFSYDALS 476

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD----------------ASKSLINLD-LFYRI-R 414
              K++FL IAC    E   E++ + D                A KSLI+L+ + Y++ +
Sbjct: 477 PEDKDLFLHIACLFNNE---EIVKVEDYLALDFLDARHGLHLLAEKSLIDLEGVNYKVLK 533

Query: 415 MHDLLRDMGREIVR----KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
           MH+LL  +G+EIVR      SI  P KR  L   KDI +VL   TG+++I+GI  D++ +
Sbjct: 534 MHNLLEQLGKEIVRYHPAHHSIREPEKRQFLVDTKDICEVLADGTGSKSIKGICFDLDNL 593

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNK--CMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
           +  ++++  AF  M  L+FLR   D+++   +   L  +P  ++R +EW   P+K+L  N
Sbjct: 594 SGRLNISERAFEGMTNLKFLRVLRDRSEKLYLPQGLNYLP-KKLRLIEWDYFPMKSLPSN 652

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDC 570
            C   LV+L M  +K+E+LW+  Q L +                 L T        +  C
Sbjct: 653 FCTTYLVNLHMRKSKLEKLWEGKQPLGNLKWMNLSNSRNLKELPDLSTATKLQDLNLTRC 712

Query: 571 KMLERLPDEL---ENLEYLT-VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
             L  +P  +    NLE L  V  T++ ELP S+G L  ++ L L   S LE +P +I  
Sbjct: 713 SSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKLRELRLRGCSKLEVLPTNI-S 771

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLS-ARNCTSLEKLPAGLSSMSSVLY--VNLCNF 683
           L  L  L I+ C  L++ P++  N+  LS AR  T++ ++P+ + S S + Y  V+    
Sbjct: 772 LESLDNLDITDCSLLKSFPDISTNIKHLSLAR--TAINEVPSRIKSWSRLRYFVVSYNEN 829

Query: 684 LKLDPNELSEIV 695
           LK  P+ L  I 
Sbjct: 830 LKESPHALDTIT 841



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 45/285 (15%)

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN-ICAEKLVSL 535
           NS    ++P L       D N    S L  +PF+           L+ LN +    LV L
Sbjct: 688 NSRNLKELPDLSTATKLQDLNLTRCSSLVEIPFSIGN-----TTNLEKLNLVMCTSLVEL 742

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFE------IIDCKMLERLPDELENLEYLTVK 589
                 + +L +   R  S L    T I+ E      I DC +L+  PD   N+++L++ 
Sbjct: 743 PSSIGSLHKLRELRLRGCSKLEVLPTNISLESLDNLDITDCSLLKSFPDISTNIKHLSLA 802

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNL--------------------ERIPESIRHLSK 629
            T I E+P  +   S ++  ++S N NL                    + +P  ++ +S+
Sbjct: 803 RTAINEVPSRIKSWSRLRYFVVSYNENLKESPHALDTITMLSSNDTKMQELPRWVKKISR 862

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
           L  L +  C+ L TLPELP +L  +   NC SLE+L        + +++   N LKL+  
Sbjct: 863 LETLMLEGCKNLVTLPELPDSLSNIGVINCESLERLDCSFYKHPN-MFIGFVNCLKLN-K 920

Query: 690 ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
           E  E+++      S+            PG  +P  F ++  G S 
Sbjct: 921 EARELIQTSSSTCSI-----------LPGRRVPSNFTYRKTGGSV 954


>gi|224126763|ref|XP_002329467.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870147|gb|EEF07278.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 514

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 208/513 (40%), Positives = 292/513 (56%), Gaps = 62/513 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFL+FRG+DTR+ FTSHLH  L  K +  +IDD+L RG  I+ +LL  IE S I+I++
Sbjct: 1   HDVFLNFRGQDTRNTFTSHLHQALCNKGVHAYIDDELERGKAIAPALLQAIEQSRISIVV 60

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA S +                      FY VDPS V  Q+ SFG    R      
Sbjct: 61  FSETYACSSYCLDELVKMLECKESKGQVVLPVFYNVDPSDVEVQNDSFGEPVLRAASCAA 120

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
             M +   WK ALT+AA LSG+  +    E+K I+ I   VL  L+  F       VG++
Sbjct: 121 ASMDKLLVWKEALTKAARLSGWHLDN-GNEAKTIQSIVEKVLAILNRAFLHVADYPVGLD 179

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+++   L + S  VC + I GIGGI K T+A A++N+I+  FEGS F  NVRE  + 
Sbjct: 180 SHIQDLNCQLRLASNDVCMVGILGIGGIGKTTVAKAIYNEIANQFEGSSFLANVREMAKQ 239

Query: 218 GGIKDLQKKLLSELSKDGN--MRNIESQL----NRLARKKVRIVF--------------- 256
             + +LQ+ LLS++  D N  + NI+  +    +RL  KKV IV                
Sbjct: 240 NKVVELQQTLLSQILGDKNCSVGNIDFGIGVIKDRLCSKKVLIVVDDVDNVDQLKRLAGE 299

Query: 257 -DDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
            D   +GSR+IIT+RD+ VL +      ++++EL   DA +LF   AF         +  
Sbjct: 300 PDWFGAGSRIIITSRDEHVLVSHGVKFVHKVEELCRDDAFQLFSLHAFRNSQPKEEFMMH 359

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD-S 374
           + +A+ YAQG+PLAL VLG +L GRS   WES + KL+ IP+ +I E+LKISYD L+D +
Sbjct: 360 SREAVTYAQGLPLALVVLGSFLYGRSVHEWESQLDKLKQIPNKKIYEILKISYDGLEDGT 419

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           QK +FLDIACF  G  +D V+ +F A              KSLI+++   +++MHDLL+ 
Sbjct: 420 QKAIFLDIACFFRGMDKDYVMKVFHACNFKPIIGVQVLIEKSLISIE-NNKLQMHDLLQA 478

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           MGR+IV++ES N PG+R+RLW H+DI  VL +N
Sbjct: 479 MGRQIVQQESPNIPGRRSRLWFHEDIVHVLTEN 511


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 275/900 (30%), Positives = 435/900 (48%), Gaps = 121/900 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+N TS L   L  K I  F D++ +R G++I+  LL  IE S I ++
Sbjct: 20  YDVFVSFRGEDTRNNITSFLLGSLESKGIDVFKDNEDLRKGESIAPELLQAIEVSRIFVV 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY VDPS VRK S S+   F++ ++RF
Sbjct: 80  VFSKNYASSTWCLRELTHICNCTQTSPGSVLPIFYDVDPSDVRKLSGSYEEAFAKYKERF 139

Query: 100 PE---KMKR---WKNALTEAADLSGFDSNVIRPESK--LIEEIANDVLKRLDATFQSKNK 151
            E   KMK    W+ AL E  +L G+D   IR +S+   IE+I   ++K+L + F S  K
Sbjct: 140 REDREKMKEVQTWREALKEVGELGGWD---IRDKSQNAEIEKIVQTIIKKLGSKFSSLPK 196

Query: 152 -GLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
             LVG+E  +EE+   L +GS   V  + I G+ GI K  +A A++ +IS  F+      
Sbjct: 197 DNLVGMESRVEELVKCLRLGSVNDVRVVGISGMSGIGKTELARALYERISDQFDVHCLVD 256

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMRNIE-SQ-----LNRLARKKVRIVFDDVTS-- 261
           +V +  +  G   +QK+LLS+   + N+   + SQ       RL   K  +VFD+V +  
Sbjct: 257 DVSKIYQDSGRLGVQKQLLSQCLNEKNLEIYDVSQGTCLAWKRLQNAKALVVFDEVVNER 316

Query: 262 -------------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA 302
                              GSR+II +RD+ +L+    +  Y++  L   +A +LFC+ A
Sbjct: 317 QLQMFTGNRDSLLRECLGGGSRIIIISRDEHILRTHGVDDVYQVPLLDREEAVQLFCKNA 376

Query: 303 FGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEE 362
           F  + + + + E  D  +  AQG PLA+K +G  L G +   W SA+ KL      +I +
Sbjct: 377 FKDNFIMSGYAEFADVILSQAQGNPLAIKAVGSSLFGLNAPQWRSAVAKLREQKSRDIMD 436

Query: 363 VLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDL 409
           VL+IS+D LDD+ K +FLDIACF    +   V+ I D               +SLI ++ 
Sbjct: 437 VLRISFDELDDTNKEIFLDIACFFNNFYVKSVMEILDFRGFYPEHGLQVLQDRSLI-INE 495

Query: 410 FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK 469
           +  I MH LL D+GR IVR++S   P   +RLW ++D+Y+++  N   E +E I++D   
Sbjct: 496 YGIIGMHGLLIDLGRCIVREKSPKEPSNWSRLWKYQDLYKIMSNNMAAEKLEAIAVDYES 555

Query: 470 VNREIH-MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
            +   H +   A SKM  L+ L+ +G  +   ++HL      E+ ++ W + P   L  +
Sbjct: 556 DDEGFHEIRVDALSKMSHLKLLKLWGVTSSGSLNHLSD----ELGYITWDKYPFVCLPKS 611

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE 584
               KLV L +  + ++ LW D  R P  L   +  +   +   K L  LPD  E  NLE
Sbjct: 612 FQPNKLVELCLEYSNIKHLWKD--RKP--LHNLRRLV---LSHSKNLIELPDLGEALNLE 664

Query: 585 YLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIP--ESIRHLSKLTFLFISHCERL 641
           +L +KG   ++++  S+G L  +  L L + ++L  +P  +   +L  LT    +H + +
Sbjct: 665 WLDLKGCIKLKKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDLNLQHLTLEGCTHLKHI 724

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
                L   L  L   +C SL  LP  +  ++S+ Y++L     L  + L +  +D  + 
Sbjct: 725 NPSVGLLRKLEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELL 784

Query: 702 HSLY--EERGIKKSMYFPGNEIPKWF---------RHQSMGSSATLKTRPPRPAGYNKLI 750
             L   E     KS+    + + +WF         R  +      L + P  P    +L 
Sbjct: 785 KQLCIGEASTDSKSI---SSIVKRWFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQL- 840

Query: 751 SFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDH 810
             ++C +V  P  +    H     + +GN +A   D K           L K+ Y++ DH
Sbjct: 841 DLSYCNLVQIPDAIGNL-HCLEILNLEGNSFAALPDLKG----------LSKLRYLKLDH 889



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 33/205 (16%)

Query: 572  MLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
            +L   P    ++  L +    + ++P+++G L  ++ L L  NS    +P+ ++ LSKL 
Sbjct: 826  LLPSAPTIPPSMIQLDLSYCNLVQIPDAIGNLHCLEILNLEGNS-FAALPD-LKGLSKLR 883

Query: 632  FLFISHCERLQTLPELPC---NLGL-----LSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
            +L + HC+ L+  P+LP    N+ L     LS  NC  L +   G SSM     +     
Sbjct: 884  YLKLDHCKHLKDFPKLPARTANVELPRALGLSMFNCPELVE-REGCSSMVLSWMI----- 937

Query: 684  LKLDPNELSEIVKDGWMKHSLYEERGIKK------SMYFPGNEIPKWFRHQSMGSSATLK 737
                     +IV+  +  +  +   G+            PG+EI  WF  Q +     + 
Sbjct: 938  ---------QIVQAHYQNNFAWWPIGMPGFSNPYICSVIPGSEIEGWFTTQHVSKDNLIT 988

Query: 738  TRPPRPAGYNKLISFAFCAVVVFPA 762
              PP    ++K I  A+C  VVF A
Sbjct: 989  IDPPPLMQHDKCIGVAYC--VVFAA 1011


>gi|297794601|ref|XP_002865185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311020|gb|EFH41444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1185

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 376/742 (50%), Gaps = 86/742 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF GED R  F SH    L  K I  F D+++ R  ++   L   I +S IA++
Sbjct: 12  VYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRSSRIAVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE+Y SS W                      FY +DPSHVRKQ+  FG  F++  +R 
Sbjct: 72  VFSEKYPSSSWCLDELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGQFGEAFAKTCQRK 131

Query: 100 PE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E + K W+ +LT+ A++ G+ S     E+K+IE IAN+VL +L+ T     +  VG+E 
Sbjct: 132 TEDETKLWRQSLTDVANVLGYHSQNWPSEAKMIEAIANNVLGKLNFTPSKDFEDFVGMED 191

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSY-----FALNVRE 213
            I ++  LL + SE V  + IWG  GI K +IA A++N++SR F+GS      F    + 
Sbjct: 192 HIAKMSVLLNLESEEVRMVGIWGSSGIGKTSIARALYNQLSRRFQGSVFIDRAFVTKSKS 251

Query: 214 AEETGGIKDLQKKL------LSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---- 261
             E+    D   KL      LSE+    N+R  ++ +    L R+KV I  DD+      
Sbjct: 252 NYESANPDDYNMKLYLLRSFLSEILDKKNVRINHLGAAEETLNRRKVLIFIDDMDDQVVL 311

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+I+ T+DK  L+    +  Y +       A K+FC+ AF  +   
Sbjct: 312 DTLAGQAQWFGCGSRIIVITKDKHFLRAHRIDHIYEVCLPSKDLALKIFCRSAFKKNSPP 371

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
              ++L  +    A  +PL LKVLG YL GR KE     + +L      +IE+ L++SYD
Sbjct: 372 EGLMDLASEVALCAGNLPLGLKVLGSYLRGRDKEDLMDMLPRLRNSLDGKIEKTLRVSYD 431

Query: 370 SLDDSQ-KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRMH 416
            L+D + K +F  IAC   GE  +++  +   S        K+L++  L +     + MH
Sbjct: 432 GLNDKKDKAIFRHIACLFNGEKANDIKLLLADSGLDVNIGLKNLVDKSLIHVRKEIVEMH 491

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL++MG+EIVR +S N PG+R  L   K+I  +L+ NTGT+ + GISLDM++++ E+H+
Sbjct: 492 SLLQEMGKEIVRAQS-NEPGEREFLVDAKEICDLLEDNTGTKKVLGISLDMDEID-ELHI 549

Query: 477 NSYAFSKMPKLRFLRFY----GDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NIC 528
           +  AF  M  L FL+FY      KN+      EG  +   ++R L     P++ +  N  
Sbjct: 550 HENAFKGMRNLIFLKFYTKKWDQKNEVRWHLPEGFNYLPHKLRLLRLDGYPMRHMPSNFR 609

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
            E LV L MP +K+E+LW+ VQ L       K   T  +   K L+ +P+     NLE L
Sbjct: 610 TENLVELHMPGSKLERLWEGVQEL-------KGLKTINLHRSKNLKEIPNLSMATNLEEL 662

Query: 587 TVKGTTIRELPESLGR-LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +   +      S  + L+ +K L++S   NLE +P  I +L  L  L +  C  L+  P
Sbjct: 663 HLGDCSSLVELSSSVQYLNKLKSLVMSGCINLEILPTGI-NLQSLFSLNLKGCSGLKIFP 721

Query: 646 ELPCNLGLLSARNCTSLEKLPA 667
            +  N+  L   + TS+E+ P+
Sbjct: 722 NISTNISWL-ILDETSIEEFPS 742



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 109/285 (38%), Gaps = 84/285 (29%)

Query: 541  KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL 600
            K ++LWD  Q L        TP         ++  LP  LE L    +   ++ ++P S+
Sbjct: 758  KSQKLWDRKQPL--------TP---------LMAMLPHSLEELFLSDI--PSLVDIPSSI 798

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
               + +  L + +  NLE +P  I +   L  L +S C RL+T P +  N+  L  +  T
Sbjct: 799  QNFTHLDCLGIEDCINLETLPTGI-NFHHLESLNLSGCSRLKTFPNISTNIEQLYLQR-T 856

Query: 661  SLEKLPAGLSSMSSVLYVNL--CNFL--------KL--------------------DPNE 690
             +E++P  +   + + Y+ +  CN L        KL                     P+E
Sbjct: 857  GIEEVPWWIEKFTKLDYITMEKCNNLIRVSLNIYKLKRLMVDFSDCGSLTEASWNGSPSE 916

Query: 691  LSEIVKDGWMKHSLYEE------------------------------RGIKKSMYFPGNE 720
            ++ +  +   K  + EE                              R I  S+   G E
Sbjct: 917  VAMVTDNIHSKFPVLEEAFYSDPDSTPPEFWFNFHFLNLDPEALLRQRFIFNSITLSGEE 976

Query: 721  IPKWFRHQSMGSSATLKTRP-PRPAGYNKLISFAFCAVVVFPAFL 764
            +P +F HQ+  +  +L + P  +P+   +   F  CAVV F +  
Sbjct: 977  VPSYFTHQT--TEISLTSIPLLQPSLSQQFFKFKACAVVSFDSLF 1019


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 216/643 (33%), Positives = 332/643 (51%), Gaps = 96/643 (14%)

Query: 125 RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGG 184
           R E+ LI++I  DV  +L +   S +K LVG+   I+E+ESLL I S  V  + IWG+ G
Sbjct: 295 RLETMLIKDIVTDVSNKLFSINSSDDKNLVGMSSRIKEVESLLFIESFDVRIVGIWGMDG 354

Query: 185 ISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNM--RNIES 242
           I K T+A A++N++S  FE S F LNV E  +  G   L++KLLS L  D N+  R   S
Sbjct: 355 IGKTTLARAIYNQVSHQFESSAFLLNVEEDFKKEGSIGLEQKLLSLLVDDRNLNIRGHTS 414

Query: 243 QLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRM 286
              RL  KKV I+ DDV                  GSR+IITT+DK +L +   N  Y +
Sbjct: 415 IKRRLRSKKVFIMLDDVKDQEILGYLTENQDSFGHGSRIIITTKDKNLLTSHLVNY-YEI 473

Query: 287 KELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWE 346
           ++L + +A ++  + +      +   +EL+ +   YAQG+PLALK+L  +L G  K  W+
Sbjct: 474 RKLSHEEAMEVLRRHSSKHKLPEDDLMELSRRVTTYAQGLPLALKILSSFLFGMKKHEWK 533

Query: 347 SAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA------ 400
           S + KL+  P+ +I +VL+ISYD LD+  KN+F+DIACF +G+ +D V+ I +       
Sbjct: 534 SYLDKLKGTPNPDINKVLRISYDELDNKVKNMFMDIACFFKGKDKDYVMEILEGCGFFPA 593

Query: 401 -------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
                   KS I +    +++MHDL++ MG E+VR+ S N PGK +RLW H+D+  V+KK
Sbjct: 594 CGIRTLLDKSFITIS-NNKLQMHDLIQHMGMEVVRQNSPNEPGKWSRLWSHEDVSHVVKK 652

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD-----------KNKCMVS 502
           NTGTE +EGI LD++ + +EIH  S  F+++ KLR L+ Y             K +C V 
Sbjct: 653 NTGTEEVEGIFLDLSNL-QEIHFTSEGFTRINKLRLLKVYKSHISKDSKCTFKKEECKVY 711

Query: 503 HLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ-------- 550
               + F   ++R+L W    LK+L  N   E+L+   MP + ++QLW  ++        
Sbjct: 712 FSHNLKFHSNDLRYLYWYGYSLKSLPDNFNPERLLEFNMPYSHIKQLWKGIKVLEKLKFM 771

Query: 551 RLPSSLCTFKTP--------------------------------ITFEIIDCKMLERLPD 578
            L  S C  + P                                I   + DC  L   P+
Sbjct: 772 ELSHSQCLVEIPDLSRASNLERLVLEGCIHLCAIHPSLGVLNKLIFLSLRDCINLRHFPN 831

Query: 579 --ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
             EL++L+   + G + + + PE  G +  +  L L +   +E +P SI +   L  L +
Sbjct: 832 SIELKSLQIFILSGCSKLEKFPEIRGYMEHLSELFL-DGIGIEELPSSIEYAIGLVVLDL 890

Query: 636 SHCERLQTLPELPCNLGLLSA---RNCTSLEKLPAGLSSMSSV 675
           ++C+ L++LP   CNL  L      +C+ LE LP     +  +
Sbjct: 891 TNCKELRSLPNSICNLESLKTLLLSDCSKLESLPQNFGKLKQL 933



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 25/158 (15%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
           +++  P+S+   K+   F +  C  LE+ P+    +E+L  L + G  I ELP S+    
Sbjct: 825 NLRHFPNSI-ELKSLQIFILSGCSKLEKFPEIRGYMEHLSELFLDGIGIEELPSSIEYAI 883

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------------ 652
            +  L L+N   L  +P SI +L  L  L +S C +L++LP+   N G            
Sbjct: 884 GLVVLDLTNCKELRSLPNSICNLESLKTLLLSDCSKLESLPQ---NFGKLKQLRKLYNQT 940

Query: 653 ----LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFL 684
               LL  ++  SL+ L   LS++ S+  +NL  CN +
Sbjct: 941 FAFPLLLWKSSNSLDFLLPPLSTLRSLQDLNLSDCNIV 978



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 38/156 (24%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV--------------KGTTI 593
            +++ LP+S+C  ++  T  + DC  LE LP     L+ L                   ++
Sbjct: 895  ELRSLPNSICNLESLKTLLLSDCSKLESLPQNFGKLKQLRKLYNQTFAFPLLLWKSSNSL 954

Query: 594  RELPESLGRLSWVKRLILSN------------------------NSNLERIPESIRHLSK 629
              L   L  L  ++ L LS+                         +N   +P SI  L +
Sbjct: 955  DFLLPPLSTLRSLQDLNLSDCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQ 1014

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            LT L + +C RLQ +PEL  ++ +++A NC  LE +
Sbjct: 1015 LTVLKLLNCRRLQAIPELLSSIEVINAHNCIPLETI 1050


>gi|297791669|ref|XP_002863719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309554|gb|EFH39978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 223/695 (32%), Positives = 357/695 (51%), Gaps = 84/695 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R +F SH+        I  FID+++ RG +I   L+  I  S IAII+
Sbjct: 63  HHVFPSFRGEDVRRDFLSHIQMEFQRMGITPFIDNEIERGQSIGPELIRAIRESKIAIIL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS W                      FY+VDPS V+K +  FG+ F +    + 
Sbjct: 123 LSRNYASSSWCLDELAEIMKCREELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E + RW+ AL   A ++G+ S     E+ +I  IA D+  +L+ +  S +  GLVG+  
Sbjct: 183 KEHVGRWRQALANVATIAGYHSTNWDNEATMIRNIATDISNKLNNSASSSDFDGLVGMTA 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++++E LLC+GS+ V  + IWG  GI K TIA  V+NK+S  F+ S F  ++ E++ T 
Sbjct: 243 HLKKMEPLLCLGSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMESI-ESKYTR 301

Query: 219 GIKD-------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS-------- 261
              D       LQ++ +S+++   +M+  ++    +RL  KKV +V D V          
Sbjct: 302 PCSDDYCAKLQLQQQFMSQITNQNDMKISHLGVVQDRLKDKKVLVVLDGVDKSMQLDAMA 361

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+++++ +    N  Y++      +A ++ C +AFG +       
Sbjct: 362 KETWWFGPGSRIIITTQNRKIFREHGINHIYKVNFPSTDEALQILCTYAFGQNSPKHGFE 421

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           EL  +  + A  +PL L+V+G Y  G SK  W  A+ +L      +I  +LK SYD+LDD
Sbjct: 422 ELAREVTQLAGELPLCLRVIGSYFRGMSKLEWTKALPRLRSSLDADILSILKFSYDALDD 481

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD----------------ASKSLINLDLFYRIRMHD 417
             K +FL IACF    +R+ ++ + +                A KSLI+L+  Y I MHD
Sbjct: 482 EDKYLFLHIACFF---NREWIVKVEEYLAETFLDVSHRLNGLAEKSLISLNRGY-INMHD 537

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMN--KVNREI 474
           LL  +GR+IVRK+SI  PG+R  L   ++I  VL  +  G+ ++ GI+ +    ++  ++
Sbjct: 538 LLVKLGRDIVRKQSIREPGQRLFLVDAREICDVLNLDANGSRSVMGINFNFGEYRIKEKL 597

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKL 532
           H++  AF  M  L+FLRF G+ N   + H       ++R L W   P+  L      E L
Sbjct: 598 HISERAFQGMSNLQFLRFEGNNNTIHLPHGLEYISRKLRLLHWTYFPMTCLPPIFNTEFL 657

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK- 589
           V L M  +K+E+LW+ ++ LP+           ++    +L+ LPD     NL+ L +  
Sbjct: 658 VELHMRYSKLEKLWEGIKPLPNLK-------RMDLSSSLLLKELPDLSTATNLQELNLSG 710

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
           G+++ +LP ++G    ++ L L   S+L  +P SI
Sbjct: 711 GSSLVKLPSAIGCTKNLRTLNLRYCSSLMNLPSSI 745



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 62/267 (23%)

Query: 574  ERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES---------- 623
            +R P+   N+E+L +KGTTI E+P S+   S + +L +S + NL+  P +          
Sbjct: 954  KRFPEISTNVEFLYLKGTTIEEVPSSIKSWSRLTKLHMSYSENLKNFPHAFDIITVLQVT 1013

Query: 624  ----------IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
                      +   S+LT L +  C++L +L ++P +L  + A +C SLE+L        
Sbjct: 1014 NTEIQEFPPWVNKFSRLTVLILKGCKKLVSLQQIPDSLSYIDAEDCESLERLD------- 1066

Query: 674  SVLYVNLCNFLKLDPN---ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQS- 729
                   C+F   DPN   + S+  K       L  +    K    PG E+P +F HQS 
Sbjct: 1067 -------CSF--QDPNIWLKFSKCFKLNQEARDLIIQTPTSKYAVLPGREVPAYFTHQST 1117

Query: 730  MGSSATLK-TRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDW-DGN-VYAVCCD 786
             G S T+K    P P      + F  C ++V     K       +++W DGN  Y V C 
Sbjct: 1118 TGGSLTIKLNEKPLPTS----MRFKACILLVH----KGDDEARDDENWMDGNGFYTVSC- 1168

Query: 787  WKRKSEGHLYSWFLGKISYVESDHVFL 813
              +KSE HLY         V ++HV++
Sbjct: 1169 --KKSEHHLYP--------VLAEHVYV 1185


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 250/818 (30%), Positives = 391/818 (47%), Gaps = 123/818 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +++VF SF GED R +  +H+      K+I  FIDD++ RG  I   L   I+ S IA++
Sbjct: 34  VHNVFPSFHGEDVRTSLLTHILKEFKSKAIYPFIDDKMKRGKIIGPELKKAIQGSRIAVV 93

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKR 98
           + S+ YASS W                       Y V+PS V+KQ   FG+ F +    +
Sbjct: 94  LLSKNYASSSWCLDELAEIMKCQEELDQMVIPILYEVNPSDVKKQRGDFGKVFKKTCEGK 153

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVE 157
             E +++W  AL++ A ++G+ S     ++K+IE+I  ++L  L  +  S++  GLVG+ 
Sbjct: 154 TNEVIEKWSQALSKVATITGYHSINWNDDAKMIEDITTEILDTLINSTPSRDFDGLVGMG 213

Query: 158 CSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRH---FEGSYFALNVRE 213
             +E+IE LL     E V  + IWG  GI K TIA  +F+++S +   F+ + F  NV+ 
Sbjct: 214 AHMEKIEPLLRPDLKEEVRMIGIWGPPGIGKTTIARFLFHQLSSNNDNFQHTVFVENVKA 273

Query: 214 AEETGGIKD--------LQKKLLSEL-SKDGNMRNIESQLNRLARKKVRIVFDDVT---- 260
              T  +          LQ+  LS++  KD  + ++    + L  KKV +V DDV     
Sbjct: 274 MYTTIPVSSDDYNAKLHLQQSFLSKIIKKDIEIPHLGVAQDTLKDKKVLVVLDDVNRSVQ 333

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GSR+I TT+D+ +LK    N  Y +      +A ++FC +AF     
Sbjct: 334 LDAMAEETGWFGNGSRIIFTTQDRHLLKAHGINDLYEVGSPSTDEALQIFCTYAFRQKSP 393

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
            A   +L+ +  K A  +PL LKV+G  L G SKE W++ +  L    H +IE  LK SY
Sbjct: 394 KAGFEDLSREVTKLAGDLPLGLKVMGSCLRGLSKEEWKNKLPSLRNNLHGDIESALKFSY 453

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRM 415
           D+L    KN+FL IACF   E  + V  I                 KSLI+ +  Y + M
Sbjct: 454 DALRREDKNLFLHIACFFNHEKIEIVEHILARAFLNVRQGIHVLTEKSLISTNSEY-VVM 512

Query: 416 HDLLRDMGREIVRKESIN-----HPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNK 469
           HDLL  +GREIVR  S +      PG+R  L   +DI +VL  +T GT ++ GI+L ++K
Sbjct: 513 HDLLAQLGREIVRNVSTSEHLTREPGQRQFLVDARDICEVLSDDTAGTSSVIGINLKLSK 572

Query: 470 VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NI 527
               +H +  AF +M  L+FLR     N             ++R LEW   P+  L  N 
Sbjct: 573 AEERLHTSESAFERMTNLQFLRIGSGYNGLYFPQSLNSISRKIRLLEWNDFPMTCLPSNF 632

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQ------------------------------------- 550
             + LV L M  +K+++LWD +Q                                     
Sbjct: 633 SPQFLVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIPDLSTATNLTYLCLRGCS 692

Query: 551 ---RLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKG-TTIRELPESLGRL 603
               LPSS+      +  ++ DC  L  LP  +    NL+   +K  +++ ELP S+G  
Sbjct: 693 SLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSSLVELPLSIGNA 752

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPCNLGLLSARNCT 660
             +K L L   S+L+ +P SI +   L  L++ +C  L  LP   E   NL +L  + C+
Sbjct: 753 INLKSLNLGGCSSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSSIENAINLQVLDLKYCS 812

Query: 661 SLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVK 696
           SL +LP  + + +++ Y++L  C+ L   P+ + ++ K
Sbjct: 813 SLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHK 850



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 32/193 (16%)

Query: 565  FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES- 623
             ++  C  L++ P+   N+++L + GT+I E+P S+     ++ L +S + NL++ P + 
Sbjct: 877  LDLTGCSSLKKFPEISTNIKHLHLIGTSIEEVPSSIKSXXHLEHLRMSYSQNLKKSPHAX 936

Query: 624  -------------------IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
                               ++ LS L  L +  C+ L +LP+LP +L  L A NC SLE+
Sbjct: 937  XTITELHITDTEXLDIGSWVKELSHLGRLVLYGCKNLVSLPQLPGSLLDLDASNCESLER 996

Query: 665  LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
            L + L +++S  +    N  KL+   +            L  +   +     PG E+P  
Sbjct: 997  LDSSLHNLNSTTF-RFINCFKLNQEAI-----------HLISQTPCRLVAVLPGGEVPAC 1044

Query: 725  FRHQSMGSSATLK 737
            F +++ G+  T++
Sbjct: 1045 FTYRAFGNFVTVE 1057



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKG-TTIRELPESLGRLSWVK 607
           LPSS+       TF++ DC  L  LP  + N   L+ L + G +++++LP S+G    ++
Sbjct: 721 LPSSIWNAINLQTFDLKDCSSLVELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQ 780

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEK 664
            L L   S+L  +P SI +   L  L + +C  L  LP       NL  L    C+SL +
Sbjct: 781 NLYLDYCSSLVNLPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVE 840

Query: 665 LPAGLSSMSSVLYVNL--CNFLKLDP 688
           LP+ +  +  +  + +  C+ LK+ P
Sbjct: 841 LPSSVGKLHKLPKLTMVGCSKLKVLP 866



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 12/127 (9%)

Query: 552 LPSSLCTFKTPITFEIID---CKMLERLP---DELENLEYLTVKG-TTIRELPESLGRLS 604
           LPSS+   +  I  +++D   C  L  LP       NL YL + G +++ ELP S+G+L 
Sbjct: 793 LPSSI---ENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLH 849

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            + +L +   S L+ +P +I  +S L  L ++ C  L+  PE+  N+  L     TS+E+
Sbjct: 850 KLPKLTMVGCSKLKVLPININMVS-LRELDLTGCSSLKKFPEISTNIKHLHLIG-TSIEE 907

Query: 665 LPAGLSS 671
           +P+ + S
Sbjct: 908 VPSSIKS 914


>gi|15235924|ref|NP_193422.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
 gi|75097884|sp|O23530.3|SNC1_ARATH RecName: Full=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1;
           Short=AtSNC1; AltName: Full=Disease resistance RPP5-like
           protein
 gi|5302803|emb|CAB46044.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268440|emb|CAB80960.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658420|gb|AEE83820.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
          Length = 1301

 Score =  308 bits (790), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 258/774 (33%), Positives = 384/774 (49%), Gaps = 87/774 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED RD+F SHL   L  K+I TFIDD++ R  +I   LL  I+ S IAI+I
Sbjct: 12  YDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPELLSAIKESRIAIVI 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      F+ VD S V+KQ+  FG+ F    K   
Sbjct: 71  FSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVFEETCKAKS 130

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K+ WK AL   A ++G+D      E+ +IEE+A DVL++   T       LVG+E  
Sbjct: 131 EDEKQSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLRK-TMTPSDDFGDLVGIENH 189

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEET 217
           IE I+S+LC+ S E    + IWG  GI K TI  A+++K+S  F   ++         + 
Sbjct: 190 IEAIKSVLCLESKEARIMVGIWGQSGIGKSTIGRALYSKLSIQFHHRAFITYKSTSGSDV 249

Query: 218 GGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------------- 261
            G+K   +K+LLSE+   KD  + +      RL ++KV I+ DDV S             
Sbjct: 250 SGMKLRWEKELLSEILGQKDIKIEHFGVVEQRLKQQKVLILLDDVDSLEFLKTLVGKAEW 309

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+I+ T+D+Q+LK    +  Y ++      A  + C+ AFG D       EL  +
Sbjct: 310 FGSGSRIIVITQDRQLLKAHEIDLIYEVEFPSEHLALTMLCRSAFGKDSPPDDFKELAFE 369

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             K A  +PL L VLG  L GR+KE W   M +L    + +I + L++SYD L    +++
Sbjct: 370 VAKLAGNLPLGLSVLGSSLKGRTKEWWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKDQDM 429

Query: 379 FLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           FL IAC   G          +D V       KSLI +     I MH+LL  +GREI R +
Sbjct: 430 FLYIACLFNGFEVSYVKDLLKDNVGFTMLTEKSLIRITPDGYIEMHNLLEKLGREIDRAK 489

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--NREIHMNSYAFSKMPKLR 488
           S  +PGKR  L + +DI++V+ + TGTE + GI L   +    R + ++  +F  M  L+
Sbjct: 490 SKGNPGKRRFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRNLQ 549

Query: 489 FLR--FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
           +L   +YGD  + +V     +P  ++R L+W  CPLK+L     AE LV+L M  +K+E+
Sbjct: 550 YLEIGYYGDLPQSLVY----LPL-KLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYSKLEK 604

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLG 601
           LW+    LP  L + K      +     L+ +PD     NLE L + G  ++  LP S+ 
Sbjct: 605 LWEGT--LP--LGSLK---EMNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVTLPSSIQ 657

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---------ELPCNLG 652
             + +  L +S+   LE  P  + +L  L +L ++ C  L+  P         + P    
Sbjct: 658 NATKLIYLDMSDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRN 716

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE 706
            +   +C   + LPAGL  +  +     C F    P +L+ +   G+    L+E
Sbjct: 717 EIVVEDCFWNKNLPAGLDYLDCLTRCMPCEF---RPEQLAFLNVRGYKHEKLWE 767



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 14/164 (8%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KLVS +M  CT +E L  DV           + +  ++  C  L   P    N+ +L +
Sbjct: 977  QKLVSFEMKECTGLEVLPIDVN--------LSSLMILDLSGCSSLRTFPLISTNIVWLYL 1028

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            + T I E+P ++G L  + +L +   + LE +P  + +LS L  L +S C  L+T P + 
Sbjct: 1029 ENTAIEEIPSTIGNLHRLVKLEMKECTGLEVLPTDV-NLSSLMILDLSGCSSLRTFPLIS 1087

Query: 649  CNLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
              +  L  +N T++E++P  +   +  +VL +  C  LK + PN
Sbjct: 1088 TRIECLYLQN-TAIEEVPCCIEDFTRLTVLMMYCCQRLKTISPN 1130



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 34/183 (18%)

Query: 531 KLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
           +LV L+M  CT +E L  DV           +  T ++  C  L   P    N+ +L ++
Sbjct: 821 RLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRSFPLISTNIVWLYLE 872

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---- 645
            T I E+P ++G L  + RL +   + LE +P  + +LS L  L +S C  L++ P    
Sbjct: 873 NTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTDV-NLSSLETLDLSGCSSLRSFPLISE 931

Query: 646 -------------ELP-----CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLK 685
                        E+P      NL  L   NC SL  LP  + ++  ++   +  C  L+
Sbjct: 932 SIKWLYLENTAIEEIPDLSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLE 991

Query: 686 LDP 688
           + P
Sbjct: 992 VLP 994



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 531  KLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
            +LV L+M  CT +E L  DV           +  T ++  C  L   P   E++++L ++
Sbjct: 888  RLVRLEMKKCTGLEVLPTDVN--------LSSLETLDLSGCSSLRSFPLISESIKWLYLE 939

Query: 590  GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             T I E+P+ L + + +K L L+N  +L  +P +I +L KL    +  C  L+ LP +  
Sbjct: 940  NTAIEEIPD-LSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLP-IDV 997

Query: 650  NLG---LLSARNCTSLEKLP 666
            NL    +L    C+SL   P
Sbjct: 998  NLSSLMILDLSGCSSLRTFP 1017



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 562 PITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLER 619
           P   + +DC +   +P E   E L +L V+G    +L E +  L  ++ + LS + NL  
Sbjct: 730 PAGLDYLDC-LTRCMPCEFRPEQLAFLNVRGYKHEKLWEGIQSLGSLEGMDLSESENLTE 788

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPA--GLSSMSS 674
           IP+ +   +KL  L +++C+ L TLP    NL     L  + CT LE LP    LSS+ +
Sbjct: 789 IPD-LSKATKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVNLSSLET 847

Query: 675 V 675
           +
Sbjct: 848 L 848



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKR 608
            LP+++   +  ++FE+ +C  LE LP +  L +L  L + G +++R  P     + W   
Sbjct: 969  LPTTIGNLQKLVSFEMKECTGLEVLPIDVNLSSLMILDLSGCSSLRTFPLISTNIVW--- 1025

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLEKLP 666
             +   N+ +E IP +I +L +L  L +  C  L+ LP      +L +L    C+SL   P
Sbjct: 1026 -LYLENTAIEEIPSTIGNLHRLVKLEMKECTGLEVLPTDVNLSSLMILDLSGCSSLRTFP 1084



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 38/205 (18%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKR 608
           LPS++      +  E+ +C  LE LP +  L +LE L + G +++R  P     + W   
Sbjct: 812 LPSTIGNLHRLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLISTNIVW--- 868

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP-A 667
            +   N+ +E IP +I +L +L  L +  C  L+ LP         +  N +SLE L  +
Sbjct: 869 -LYLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLP---------TDVNLSSLETLDLS 918

Query: 668 GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
           G SS+ S   +             SE +K  +++++  EE         P        ++
Sbjct: 919 GCSSLRSFPLI-------------SESIKWLYLENTAIEE--------IPDLSKATNLKN 957

Query: 728 QSMGSSATLKTRPPRPAGYNKLISF 752
             + +  +L T P       KL+SF
Sbjct: 958 LKLNNCKSLVTLPTTIGNLQKLVSF 982



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 14/126 (11%)

Query: 522  LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE-- 579
            L+T  + +  +V L +  T +E++       PS++      +  E+ +C  LE LP +  
Sbjct: 1013 LRTFPLISTNIVWLYLENTAIEEI-------PSTIGNLHRLVKLEMKECTGLEVLPTDVN 1065

Query: 580  LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
            L +L  L + G +++R  P    R+      +   N+ +E +P  I   ++LT L +  C
Sbjct: 1066 LSSLMILDLSGCSSLRTFPLISTRI----ECLYLQNTAIEEVPCCIEDFTRLTVLMMYCC 1121

Query: 639  ERLQTL 644
            +RL+T+
Sbjct: 1122 QRLKTI 1127


>gi|449443189|ref|XP_004139363.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 967

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 265/839 (31%), Positives = 409/839 (48%), Gaps = 109/839 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFTSHLH  L  K I  FIDD +L RG+ I  SLL  IE S I+I+
Sbjct: 16  FDVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIV 75

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I SE YASS W                       FY+V+PSHVR+Q   FG  F++L+ R
Sbjct: 76  IISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVR 135

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK---NKGLVG 155
           F  KM+ W  ALT  + +SG+D      E+ LI+ I  +V K+L  +  ++    K  VG
Sbjct: 136 FSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLRNSATTELDVAKYPVG 195

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +  +  L  + S  +  + ++GIGG+ K T+A A++NKI+  FEG  F  NVREA 
Sbjct: 196 IDIQVSNL--LPHVMSNEITMVGLYGIGGMGKTTLAKALYNKIADEFEGCCFLSNVREAS 253

Query: 215 EETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------- 261
            +  G+ +LQK LL E+  D +++       I    +RL  KK+ ++ DDV +       
Sbjct: 254 NQYWGLVELQKTLLREILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDVDTHEQLQAL 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VI TTR+KQ+L +   N   R+  L   +  +LF   AF   H  + +
Sbjct: 314 AGGHHWFGHGSKVIATTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFNNCHPSSDY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLE-IIPHVEIEEVLKISYDS 370
           ++++ +A+ Y +G+PLAL+VLG +L     +  +E  + + E       I+++L+ISYD 
Sbjct: 374 LDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYENSYLDKGIQDILRISYDE 433

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRM 415
           L+   K++FL I+C    E ++EV  +                    SL+ +D F R+ M
Sbjct: 434 LEQDVKDIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEM 493

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++ MG  I   E+ N   KR RL   KD+  VL  +    A++ I L+ ++   E+ 
Sbjct: 494 HDLIQQMGHTIHLLETSN-SHKRKRLLFEKDVMDVLNGDMEARAVKVIKLNFHQPT-ELD 551

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           ++S  F K+  L  L+ +   N      LE +P + +R + WP+ P  +L      EKL 
Sbjct: 552 IDSRGFEKVKNLVVLKVH---NVTSSKSLEYLP-SSLRWMIWPKFPFSSLPSTYSLEKLT 607

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KG 590
            L MP + ++   +         C +   I       K LE + D     NLE L + + 
Sbjct: 608 ELSMPSSFIKHFGNGYLN-----CKWLKRINLNY--SKFLEEISDLSSAINLEELNLSEC 660

Query: 591 TTIRELPESLGRLSWVKRLILSNNSN-LERIPESIR--HLSKLTFLFISHCERL---QTL 644
             +  + ES+G L  + +L LS++ N   + P +++   L KL    I +  +     T 
Sbjct: 661 KKLVRVHESVGSLGKLAKLELSSHPNGFTQFPSNLKLKSLQKLCDKTIPNDWKSYWSSTF 720

Query: 645 PELPCNLGLLSARNCTSLE---KLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGW 699
            +        S+  C  LE   K+P G      V+Y+N   C  L   P+ ++E +    
Sbjct: 721 VDRCMQRAHYSSNYCGFLEEILKVPEG------VIYMNAQGCRSLARFPDNIAEFIS--- 771

Query: 700 MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
              S Y +   K+ +     +IP+WF  +S  +S T  T    P    KL   A C  V
Sbjct: 772 -CDSEYADGKYKQLILMNNCDIPEWFHFKSTNNSITFPTTFNYPGW--KLKVLAACVKV 827


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 247/756 (32%), Positives = 394/756 (52%), Gaps = 92/756 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRG DTR +FT +L   L  K I  FID++L RG+++S  LL  IE S I+I++
Sbjct: 16  YDVFLSFRGADTRHSFTCYLLDFLRRKGIDAFIDEELRRGNDLS-GLLERIEQSKISIVV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA+S W                      FY+V  S VR Q+  FG  F R  + F 
Sbjct: 75  FSENYANSAWCLEELAKIMDCKRTFDQVVLPVFYKVPASDVRYQTGKFGAPFERSEEVFQ 134

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
               ++  WK AL  A+D++G+      PE   +++IA +  K L+    S+ +GL G+E
Sbjct: 135 GSEHRVPAWKEALRAASDIAGYVLPERSPECDFVDKIAKETFKVLNKLSPSEFRGLPGIE 194

Query: 158 CSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             + E+E L+        ++  + G+ GI K T+A  V+ +    F+G  F  NV+   +
Sbjct: 195 SRMMELEKLIDFEETSCVRIVGVLGMAGIGKTTVADCVYKQNYNRFDGYCFLANVQNESK 254

Query: 217 TGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS--------- 261
             G+  LQ+KLL +L  + N+         ++  +RL  KK+ IV DDV +         
Sbjct: 255 LHGLDHLQRKLLRKLLDEDNLDVGAPEGAHDAFKDRLGNKKLFIVLDDVANENQLRNLIG 314

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    G+R++ITT +K++L+    N+ Y +  L   ++ +LFC  AF  +      
Sbjct: 315 GAGKELYREGTRIVITTSNKKLLEKV-VNETYVVPRLSGRESLELFCLSAFSSNLCATPE 373

Query: 313 I-ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + +L++K + Y++G PLALK+LG  LC R K  W+    +L+  P  +I +VLK+ Y+ L
Sbjct: 374 LMDLSNKFVDYSKGHPLALKLLGSDLCQRDKSYWKLKWERLQRRPDGKIHDVLKVCYEEL 433

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIF-----DAS---KSLINLDLFY----RIRMHDLL 419
            + ++++FLD+ACF   E  D V S+      DAS     LI+  L      R+ MHDLL
Sbjct: 434 CEEEQSIFLDVACFFRSEKLDFVSSVLSTHHTDASTLISDLIDKCLITVSDNRLEMHDLL 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
             MGRE+  + SI   G R RLW+ +DI +VLK  TGT  I GI LDM+ V+  + +++ 
Sbjct: 494 LTMGREVGYESSIKEAGNRGRLWNQEDICRVLKYKTGTAEIRGIFLDMSNVD-SMKLSAD 552

Query: 480 AFSKMPKLRFLRFYGD------KNKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICA 529
            F++M  L+FL+FY        +N C +   +G+     E+ +L W   PL+ L  N   
Sbjct: 553 IFARMWNLKFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQGYPLEYLPSNFNP 612

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPS----SLCTFKTPITFE-IIDCKMLERLPDELENLE 584
           +KLV L +  + + QL +D +         L   K  +    +++ + LERL   LEN  
Sbjct: 613 KKLVYLNLRYSNIMQLCEDEKNTGELRWVDLSYSKELMNLTGLLEARKLERL--NLENCT 670

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
            LT K + IR++ +SL  L+      L +  NL+ +P+ I  L  L F+ +S C +L+  
Sbjct: 671 SLT-KCSAIRQM-DSLVSLN------LRDCINLKSLPKRI-SLKSLKFVILSGCSKLKKF 721

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           P +  N+  L   + T+++++P  + ++  +  +NL
Sbjct: 722 PTISENIESLYL-DGTAVKRVPESIENLQKLTVLNL 756



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 47/335 (14%)

Query: 566  EIIDCKMLERLP-DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            ++ D   LE LP      L  + +    + +LP+S   LS ++ L LS N N++ +P SI
Sbjct: 830  KVHDLTCLELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRN-NIKNLPGSI 888

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS-------SMSSVLY 677
            + L  L  L++ HC++L +LP LP NL  L A  C SLE +   ++       + S+ ++
Sbjct: 889  KKLHHLKSLYLKHCQQLVSLPVLPSNLQYLDAHGCISLETVAKPMTLLVVAERNQSTFVF 948

Query: 678  VNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-----------SMYFPGNEIPKWFR 726
             +     KL+ +    IV    +K  +     +++           S  FPGN++P WFR
Sbjct: 949  TDC---FKLNRDAQESIVAHTQLKSQILGNGSLQRNHKGLVSEPLASASFPGNDLPLWFR 1005

Query: 727  HQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRH-----KSGEDDWDGNVY 781
            HQ MGSS  ++T  P     +K I  + C VV F  ++          K    + DG+  
Sbjct: 1006 HQRMGSS--METHLPPHWCDDKFIGLSLCVVVSFKDYVDKTNRFSVICKCKFRNEDGDCI 1063

Query: 782  AVCCD---WKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSF 838
            +  C+   WK +      S    +   + SDHVF+   S+   +      + +   + + 
Sbjct: 1064 SFTCNLGGWKEQCGSS--SSREEEPRKLTSDHVFI---SYNNCFHAKKSHDLNRCCNTTA 1118

Query: 839  HFPPYLERG---------EVKKCGIHFVYAQDSAD 864
             F  ++  G         EV KCG+  +YA D  D
Sbjct: 1119 SFKFFVTDGVSKRKLDCCEVVKCGMSLLYAPDEND 1153


>gi|45544515|dbj|BAD12595.1| truncated N protein [Nicotiana tabacum]
          Length = 638

 Score =  308 bits (789), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 204/553 (36%), Positives = 305/553 (55%), Gaps = 74/553 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL+ K IKTF DD+ +  G  I   L   IE S  AI+
Sbjct: 4   YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 63

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA+SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 64  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 123

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++RW+ AL EAA+L G   N  + ++  I +I + +  +L     S  + +VG+
Sbjct: 124 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQNIVGI 183

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +E+IESLL IG  GV  + IWG+GG+ K TIA A+F+ +      S  F+G+ F  +
Sbjct: 184 DTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKD 243

Query: 211 VREAEETGGIKDLQKKLLSELSKD-GNMRNIE----SQLNRLARKKVRIVFDDVTS---- 261
           ++E +   G+  LQ  LLSEL ++  N  N E       +RL  KKV IV DD+ +    
Sbjct: 244 IKENKR--GMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHY 301

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+IITTRDK +++    +  Y +  L   ++ +LF Q AFG +  
Sbjct: 302 LEYLAGDLDWFGNGSRIIITTRDKHLIEK--NDIIYEVTALPDHESIQLFKQHAFGKEVP 359

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           + +  +L+ + + YA+G+PLALKV G  L       W+SA+  ++   +  I + LKISY
Sbjct: 360 NENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKISY 419

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L+  Q+ +FLDIACFL GE +D ++ I ++              KSL+ +  + +++M
Sbjct: 420 DGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQM 479

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++DMG+ IV  +    PG+R+RLW  K++ +V+  NTGT A+E I +  +  +  + 
Sbjct: 480 HDLIQDMGKYIVNFQK--DPGERSRLWLAKEVEEVMSNNTGTMAMEAIWV--SSYSSTLR 535

Query: 476 MNSYAFSKMPKLR 488
            ++ A   M +LR
Sbjct: 536 FSNQAVKNMKRLR 548


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 223/608 (36%), Positives = 326/608 (53%), Gaps = 73/608 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFTSHL+  L  + I  ++DD+ L RG  I  +L   IE S  +I+
Sbjct: 21  YDVFLSFRGKDTRNNFTSHLYSNLEQRGIDVYMDDRGLERGKTIEPALWQAIEDSRFSIV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS V  Q  ++ + F   +++ 
Sbjct: 81  VFSRDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVADQKGNYKKAFIEHKEKH 140

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               +K+K W + L+  A+LSG+D    R ES+ I++I   +  +L  T  + +K LVG+
Sbjct: 141 SGNLDKVKCWSDCLSTVANLSGWDVRN-RDESQSIKKIVEYIQCKLSFTLPTISKNLVGI 199

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
           +  ++ +   +   +     + I G+GG+ K T+A  ++++I   F GS F  NVRE   
Sbjct: 200 DSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVFA 259

Query: 216 ETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
           E  G+  LQ++LLSE+S +      + R I+    RL  KKV ++ DDV           
Sbjct: 260 EKDGLCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLILDDVDDEEQLQMLAA 319

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IIT+R+K VL +    + Y   +L   DA  LF   AF  D       E
Sbjct: 320 EHGTFGPGSRIIITSRNKHVLDSHGVTRIYEADKLNDKDALMLFSWKAFKRDQPAEDLSE 379

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ + + YA G+PLAL+V+G +L  R    W+SA+ ++  IP  +I +VL+IS+D L + 
Sbjct: 380 LSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFDGLHEL 439

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDM 422
           +K +FLDIACFL+G  +D +  + D+         ++LI   L       IRMH+LL+ M
Sbjct: 440 EKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKSLIRVSRDEIRMHNLLQKM 499

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR ES   PG+R+RL  +KD+   LK +TG   IE I +D+ K  +E   N  AFS
Sbjct: 500 GEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGK--IESIFVDLPKA-KEAPWNMTAFS 556

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
           KM KLR L+ +       V   EG  +   E+R LEW   P K+L  C   + LV L M 
Sbjct: 557 KMTKLRLLKIHN------VDLSEGPEYLSNELRFLEWHAYPSKSLPACFRLDDLVELYMS 610

Query: 539 CTKVEQLW 546
           C+ +EQLW
Sbjct: 611 CSSIEQLW 618



 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 212/642 (33%), Positives = 327/642 (50%), Gaps = 96/642 (14%)

Query: 127  ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS 186
            ES+ I++IA  +  +L  T Q+ +K LVG++  ++ +   +   +     + I G+GG+ 
Sbjct: 651  ESQSIKKIAEYIQCKLSFTLQTISKNLVGIDSRLKVLNEYIDEQATDTLFIGICGMGGMG 710

Query: 187  KITIAGAVFNKISRHFEGSYFALNVRE--AEETGGIKDLQKKLLSELSKD-----GNMRN 239
            K T+A  ++++I   F+GS F  NVRE  AE+ G  + LQ++LLSE+S +      + R 
Sbjct: 711  KTTVARVMYDRIRWQFQGSCFLANVREVFAEKDGRCR-LQEQLLSEISMELPTARDSSRR 769

Query: 240  IESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKK 283
            I+    RL  KKV ++ DDV                  GSR+IIT+R+K VL +    + 
Sbjct: 770  IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRI 829

Query: 284  YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
            Y   +L   DA  LF   AF  D       EL+ + + YA G+PLAL+V+G +L  R   
Sbjct: 830  YEADKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLR 889

Query: 344  VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--- 400
             W+SA+ ++  IP  +I +VL+IS+D L + +K +FLDIACFL+G  +D +  + D+   
Sbjct: 890  EWKSAIDRMNDIPDRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRIARLLDSCGF 949

Query: 401  ----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                       KSLI++     IRMH+LL+ MG EIVR ES   PG+R+RL  +KD+   
Sbjct: 950  HADIGMQALIEKSLISVSR-DEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDA 1008

Query: 451  LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF- 509
            L+ +  TE I+ I LD+ K  +E   N  AFSKM KLR L+ +       V   EG  + 
Sbjct: 1009 LEDS--TEKIQSIFLDLPKA-KEAQWNMTAFSKMTKLRLLKIHN------VDLSEGPEYL 1059

Query: 510  -AEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFE 566
              E+R LEW   P K+L  C   ++LV L M C+ +EQLW          C  K  +  +
Sbjct: 1060 SKELRFLEWHAYPSKSLPACFRPDELVELYMSCSSIEQLW----------CGCKILVNLK 1109

Query: 567  IIDCK---MLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERI 620
            II+      L   PD   + NLE L ++G  ++ E+  S GR   ++ + L N  +L  +
Sbjct: 1110 IINLSNSLYLINTPDFTGIPNLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRIL 1169

Query: 621  PESIRHLSKLTFLFISHCERLQTLPELPCNLG--------------------------LL 654
            P ++  +  L    +S C +L   P++  N+                           LL
Sbjct: 1170 PSNL-EMESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLL 1228

Query: 655  SARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
            S  NC +LE +P+ +  + S+  L V+ C+ LK  P  L E+
Sbjct: 1229 SMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEV 1270



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 29/149 (19%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
            M+DVF SFRG+   +NFT HLH  L  + I  +   Q+     I  SL+  I+ S ++II
Sbjct: 1593 MHDVFFSFRGKHNSNNFT-HLHTALFQRGIIRY-KRQIKYLKKIESSLVSDIKESGLSII 1650

Query: 61   IFSERYASSRWF------------------------FYRVDPSHVRKQSHSFGRHFSRLR 96
            IF+  Y S+  F                         Y V+ S V +Q+ S+   F +  
Sbjct: 1651 IFARDYVSTLGFGGFVKIDEFMKKMKSDTVFPVSTVSYNVEQSRVDEQTESYTIVFDKDE 1710

Query: 97   KRFP---EKMKRWKNALTEAADLSGFDSN 122
            + F    EK++RW + LTE A  SG +S+
Sbjct: 1711 EDFSEDKEKVQRWMDILTEVAISSGSESS 1739



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 135/342 (39%), Gaps = 90/342 (26%)

Query: 528  CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLE 584
            C   LV L M   K      +++ +PSS+   K+    ++ DC  L+ +P+   E+E+LE
Sbjct: 1221 CLAGLVLLSMNNCK------NLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLE 1274

Query: 585  YLTVKGTTIRE------LPESLGRLSW--VKRLI----------LSNNSNLERI------ 620
                 GT+IR+      L ++L  LS+   KR+           LS   +LE +      
Sbjct: 1275 EFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRIAVNLTDQILPSLSGLCSLEELDLCACN 1334

Query: 621  -----------------------------PESIRHLSKLTFLFISHCERLQTLPELPCNL 651
                                         P+SI  LS+L  L +  C  L++LPE+P  +
Sbjct: 1335 LGEGAVPEDIGCLSSLRSLNLSRNNFISLPKSINQLSRLEKLALKDCVMLESLPEVPLKV 1394

Query: 652  GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
              +    C  L+++P  +   S    +    F  L+  EL        M  ++ E+    
Sbjct: 1395 QKVKLDGCLKLKEIPDPIKLCS----LKRSEFKCLNCWELYMHNGQNNMGLNMLEKYLQG 1450

Query: 712  KS------MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGY-----NKLISFAFCAVVVF 760
             S      +  PGNEIP WF HQS  SS     R   P+ Y     N  + FA CA   F
Sbjct: 1451 SSPRPGFGIAVPGNEIPGWFTHQSKESS----IRVQMPSNYLDGDDNGWMGFAACA--AF 1504

Query: 761  PAF-LKYFRHKSGED------DWDGNVYAVCCDWKRKSEGHL 795
              + LK   ++S  +       +D  V    C  +  + GHL
Sbjct: 1505 STYELKERENESSSELELSFHSYDQGVKVENCGVRMVNSGHL 1546


>gi|15236505|ref|NP_192585.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5791483|emb|CAB53527.1| putative protein [Arabidopsis thaliana]
 gi|7267486|emb|CAB77970.1| putative protein [Arabidopsis thaliana]
 gi|332657243|gb|AEE82643.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1234

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 243/743 (32%), Positives = 373/743 (50%), Gaps = 84/743 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF GED R  F +H    L  K I  F D+++ RG++I   L+  I+ S IA++
Sbjct: 10  VYDVFTSFSGEDIRVTFLTHFLKELDRKMIIAFKDNEIERGNSIGTELIQAIKDSRIAVV 69

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEK 102
           +FS++Y+SS W                  FY +DPS VRKQ   FG  F    + R   +
Sbjct: 70  VFSKKYSSSSWCLNELVEIVNCKEIVIPVFYDLDPSDVRKQEGEFGESFKETCKNRTDYE 129

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSIE 161
           ++RW  ALT  A+++G+ +     E+KLIEEI NDVL +L     SK+     G+E  I+
Sbjct: 130 IQRWGQALTNVANIAGYHTRKPNNEAKLIEEITNDVLDKLMKLTPSKDFDEFFGIEDHIK 189

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF----------ALNV 211
           E+  LLC+ SE V  + IWG  GI K TIA A+FN+I RHF+G  F          A+  
Sbjct: 190 ELSLLLCLESEEVRMVGIWGPTGIGKTTIARALFNRIYRHFQGRVFIDRAFISKSMAIYS 249

Query: 212 REAEETGGIK-DLQK--KLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
           R   +   +K  LQ+         K+  + ++++   RL + KV I  DD+         
Sbjct: 250 RANSDDYNLKLHLQEKLLSKLLDKKNLEINHLDAVKERLRQMKVLIFIDDLDDQVVLEAL 309

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+I+ T+DK +L+    +  Y +       A K+FC+ AF  D      
Sbjct: 310 ACQTQWFGHGSRIIVITKDKHLLRAYGIDHIYEVLLPSKDLAIKMFCRSAFRKDSPPNGF 369

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL- 371
           IEL    +K A  +PL L +LG YL GRSKE W   M  L      +I++ L++SYD L 
Sbjct: 370 IELAYDVVKRAGSLPLGLNILGSYLRGRSKEDWIDMMPGLRNKLDGKIQKTLRVSYDGLA 429

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYR-IRMHD 417
            +  + +F  IAC    E   ++  + + S             KSLI ++   + + MH 
Sbjct: 430 SEDDQAIFRHIACIFNFEACSDIKKLLEDSGLNVTNGLINLVDKSLIRIEPKQKTVEMHC 489

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL++  REI+R +S + PGKR  L   KDI  VL   +GT  + GISLDM+++  E+H+ 
Sbjct: 490 LLQETAREIIRAQSFDDPGKREFLVDGKDIADVLDNCSGTRKVLGISLDMDEI-EELHLQ 548

Query: 478 SYAFSKMPKLRFLRFYGDKN------KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
             AF KM  LRFL+ Y + N      K ++          +R L W + P++ +  +   
Sbjct: 549 VDAFKKMLNLRFLKLYTNTNISEKEDKLLLPKEFNYLPNTLRLLSWQRFPMRCMPSDFFP 608

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           + LV L MP +K+E+LWD V  L       +      +   + L+  P+     NLE L+
Sbjct: 609 KYLVKLLMPGSKLEKLWDGVMPL-------QCLKNMNLFGSENLKEFPNLSLATNLETLS 661

Query: 588 VK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           +    ++ E+P ++G L+ +  L +S   NLE+ P  + +L  L+ L ++ C RL+  P 
Sbjct: 662 LGFCLSLVEVPSTIGNLNKLTYLNMSGCHNLEKFPADV-NLKSLSDLVLNGCSRLKIFPA 720

Query: 647 LPCNLGLLSARNCTSLEKLPAGL 669
           +  N+  L   N  ++E+ P+ L
Sbjct: 721 ISSNISEL-CLNSLAVEEFPSNL 742



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 34/219 (15%)

Query: 554  SSLCTFKTPITFE------IIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            ++L TF T I  +      +  C  L+  PD   N+  L +  T I E+P  +   S +K
Sbjct: 826  TNLETFPTGINLQSLKRINLARCSRLKIFPDISTNISELDLSQTAIEEVPLWIENFSKLK 885

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
             LI+   + LE +  +I  L  L  +  S C  L        ++ +L   N  S   LP 
Sbjct: 886  YLIMGKCNMLEYVFLNISKLKHLKSVDFSDCGILSK-----ADMYMLQVPNEAS-SSLPI 939

Query: 668  GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
                 + ++++N C  L                + +L  ++   K M  PG E+P +F H
Sbjct: 940  NCVQKAELIFIN-CYKLN---------------QKALIRQQFFLKKMILPGEEVPFYFTH 983

Query: 728  QSMGSSATLKTRPPRPAGYNKLISFAFCAVV----VFPA 762
            Q++GSS  +       +   +   F  C VV    VFPA
Sbjct: 984  QTIGSSIGIPLLHILLS--QQYFRFKACVVVDPKFVFPA 1020



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 13/118 (11%)

Query: 580 LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           LENL YL + G T  +L + +  L+ +K + L ++ NL+ IP+    LS  + L I + E
Sbjct: 744 LENLVYLLIWGMTSVKLWDGVKVLTSLKTMHLRDSKNLKEIPD----LSMASNLLILNLE 799

Query: 640 RLQTLPELPC------NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
           +  ++ ELP       NL  L    CT+LE  P G+ ++ S+  +NL  C+ LK+ P+
Sbjct: 800 QCISIVELPSSIRNLHNLIELDMSGCTNLETFPTGI-NLQSLKRINLARCSRLKIFPD 856


>gi|399920222|gb|AFP55569.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1134

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 252/747 (33%), Positives = 382/747 (51%), Gaps = 87/747 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+  L  + I+TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYIELQRQGIRTFRDDPQLERGTAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S +YA+S W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPKYATSTWCLRELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHEEKFG 138

Query: 101 ---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ--SKNKGLVG 155
              ++++ W++ALT+ A L+G+ S   R E+++I+EI  ++  ++  +      ++ L G
Sbjct: 139 VGNKEVEGWRDALTKVASLAGWTSESYRYETQIIKEIVQELWSKVHPSLTVFGSSEKLFG 198

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++   EEI+ LL   +  V  + IWG+GG+ K T+A  V+ KIS  F+   F  +VR+A 
Sbjct: 199 MDTKWEEIDVLLDKEANDVRFIGIWGMGGMGKTTLARLVYEKISYQFDVCIFLDDVRKAH 258

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG------- 262
              G+  L K +LS+L K+ N++  N+ S +  + R    K V +V D+V          
Sbjct: 259 ADHGLVYLTKTILSQLLKEENVQVWNVYSGIAWIKRCVCNKAVLLVLDNVDQSEQLEKLV 318

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITTR++ VL      K Y +K L   +A +LF   AF     +  ++
Sbjct: 319 GEKDWFGLRSRIIITTRNQLVLVTHGVEKPYELKGLNNDEALQLFSWKAFRKYEPEVDYV 378

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           + +    +YA G PLALK LG  L   RS   W SA+ KL+  P   + ++LK+SYD LD
Sbjct: 379 KHSMSFARYAGGHPLALKTLGSLLYNKRSLHSWSSALAKLQNTPDKTVFDLLKVSYDELD 438

Query: 373 DSQKNVFLDIACFL--------EGEHRDEVISIFD--------ASKSLINLDLFYRIRMH 416
             +K +FLDIACF         + E   E +  F+        A +SL+ +     I MH
Sbjct: 439 KMEKKIFLDIACFRRFRRLYDDDDEFMIEQVYKFESRIAIDVLADRSLLTIS-HNHIYMH 497

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL+R+MG EIVR+E+   PG R+RLW   DI+ V   NTGTEAIEGI LD+ ++  E   
Sbjct: 498 DLIREMGCEIVRQEN-EEPGGRSRLWLRNDIFHVFTNNTGTEAIEGILLDLAEL-EEADW 555

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVS 534
           N  AFSKM KL+ L  +  K       L       +R L W   P K+L  C   ++L  
Sbjct: 556 NLEAFSKMCKLKLLYLHNLKLSVGPKFLPNA----LRFLNWSWYPSKSLPPCFQPDELTE 611

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
           L +  + ++ LW+ ++      C+ +   + ++     L R PD   + NLE L ++G T
Sbjct: 612 LSLVHSNIDHLWNGIK------CS-RNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCT 664

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            + ++  S+  L  +K     N  +++ +P  + ++  L    +S C +L+ +PE     
Sbjct: 665 NLVKIHPSITLLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQT 723

Query: 652 GLLSAR--NCTSLEKLPAGLSSMSSVL 676
             LS      +++E LP+    +S  L
Sbjct: 724 KTLSKLCIGGSAVENLPSSFERLSKSL 750



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 129/296 (43%), Gaps = 46/296 (15%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
            E+P  +G LS ++ L L  N N   +P SI  LSKL  + + +C+RLQ LPELP    L 
Sbjct: 816  EIPNDIGYLSSLELLQLRGN-NFVNLPASIHLLSKLKRINVENCKRLQQLPELPATDELR 874

Query: 654  LSARNCTSLEKLP-------------AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
            +   NCTSL+  P             +G++  S+V       FL     +L E  +  W 
Sbjct: 875  VVTDNCTSLQVFPDPPNLSRCPEFWLSGINCFSAVGNQGFRYFLYSRLKQLLE--ETPW- 931

Query: 701  KHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV- 759
              SLY  R     +  PG+EIP+WF +QS+G S   K   P  A  +K I  A C ++V 
Sbjct: 932  --SLYYFR-----LVIPGSEIPEWFNNQSVGDSVIEKL--PSYACNSKWIGVALCFLIVP 982

Query: 760  --FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNS 817
               P+ +   RH       D      CC W +   GH     +  +  + SDH+      
Sbjct: 983  QDNPSAVPEVRH------LDPFTRVFCC-WNKNCSGH--GRLVTTVKQIVSDHLLFAV-- 1031

Query: 818  FGGEYFGPN--YDEFSFRIHCSFHFPPYL--ERG-EVKKCGIHFVYAQDSADHILK 868
                 + P    ++    I   F     +   RG +VKKCG   +Y  D+ + I K
Sbjct: 1032 LPKFIWKPQNCLEDTCTEIKFVFVVDQTVGNSRGLQVKKCGARILYEHDTEELISK 1087


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 241/755 (31%), Positives = 382/755 (50%), Gaps = 87/755 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF GED R  F SH    L  K I  F D+++ + +++   L   I+ S IA++
Sbjct: 11  VYDVFPSFSGEDVRVTFLSHFLKELDRKLIIAFKDNEIKKSESLDPVLKQAIKDSRIAVV 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FYR+DPSHVRKQ+  FG+ F +     
Sbjct: 71  VFSINYASSTWCLNELVEIVKCKEEFSQMVIPVFYRLDPSHVRKQTGDFGKIFEKTCHNK 130

Query: 100 PEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E++K +WK ALT  A++ G+ S     E+K+IEEIANDVL +L  T     +  VG+E 
Sbjct: 131 TEEVKIQWKEALTSVANILGYHSTTWFNEAKMIEEIANDVLDKLLLTTSRDFEDFVGIED 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF--------ALN 210
            I E+  LL + S+ V  + IWG  GI K  IA A+FN++SRHF GS F        ++N
Sbjct: 191 HISEMSILLQLASKEVRMVGIWGSSGIGKTIIARALFNRLSRHFHGSIFIDRAFISKSMN 250

Query: 211 VREAEETGGIK---DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---- 261
           +     +        +Q K LS++   KD  + ++ +   RL  +KV I  DD+      
Sbjct: 251 IYSQANSDDYNLKLHMQGKFLSQILDKKDIKVYHLGAMRERLKNRKVLICIDDLDDQLVL 310

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+I+ T+DK  L+    +  Y ++      A ++ C+  F   +  
Sbjct: 311 DALVGQTHWFGCGSRIIVITKDKHFLRAHKIDHIYEVRLPSEEAALEMLCRSTFKQKYPP 370

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
              +EL  +    A  +PL L +L  YL GR K+ W   + +L      +IE+ L++SYD
Sbjct: 371 DGFLELASEVALRAGNLPLGLNILSSYLRGRDKKEWMDMLPRLRNGLDGKIEKTLRVSYD 430

Query: 370 SLDDSQ-KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRMH 416
            L++ + K +F  IAC    E  +++  +   S        K+L++  L +     + MH
Sbjct: 431 GLNNKKDKAIFRHIACLFNREKINDIKLLLANSDLDVTIGLKNLVDKSLIHESYDIVEMH 490

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL++MG+EIVR +S N PG+   L   KD   VL+ N GT+ + GISLD+++++ E+H+
Sbjct: 491 SLLQEMGKEIVRMQS-NEPGEHEFLVDWKDTCDVLEDNKGTKNVLGISLDIDEID-EVHI 548

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVS-HL----EGVPFAEVRHLEWPQCPLKTL--NICA 529
           +  AF  M  L FL+F+  + K  +  HL    +  P  ++R L W + PL+ +  N   
Sbjct: 549 HENAFKGMRNLFFLKFFTKRQKKEIRWHLSKGFDHFP-PKLRLLSWEKYPLRCMPSNFHP 607

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPS--SLCTFKTPITFEIIDCKMLERLPDELENLEYLT 587
           E LV L M  +K+E+LWD V  L     +  + +    EI D  M         NLE L 
Sbjct: 608 ENLVKLVMRWSKLEKLWDGVHPLTGLKEINLWGSKNLIEIPDLSM-------ATNLEKLV 660

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           +   +++ E+P S+  L+ +    +    NLE +P  I +L  L  L +  C RL++ P+
Sbjct: 661 LNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGI-NLQSLYDLNLMGCSRLKSFPD 719

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC 681
           +  N+  L     T++E+LP+ L  + +++ + +C
Sbjct: 720 ISSNISTLDLYG-TTIEELPSNL-HLENLVNLRMC 752


>gi|357513735|ref|XP_003627156.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521178|gb|AET01632.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1473

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 255/770 (33%), Positives = 400/770 (51%), Gaps = 110/770 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR   TSHLH  L  KSIKT++D  L RG++I  +L   IE S ++I++
Sbjct: 8   HDVFLSFRGEDTRYGITSHLHAALIHKSIKTYVDSLLERGEDIWPTLAKAIEESHVSIVV 67

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE +A+S W                      FY+ DPS +R Q+ S+   F++  +   
Sbjct: 68  FSENFATSTWCLEELVKVLECRKVKGQVVIPVFYKTDPSDIRNQTGSYENAFAKHERDLG 127

Query: 101 E---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
               K+  WK AL EAA +SG+ +   + ES LI++I NDVL++L   + ++ +G+V  E
Sbjct: 128 TNDLKVLNWKVALAEAATISGWHTQTHKEESILIDKIVNDVLQKLQLRYPNELEGVVRNE 187

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            + E++ESL+    E   +L IWG+GG+ K  IA  +F K+   ++   FA N +E   +
Sbjct: 188 KNCEQVESLV----ERFPRLGIWGMGGMGKTIIAKVLFAKLFAQYDHVCFA-NAKEYSLS 242

Query: 218 GGIKDLQKKLLSELSKDG-NMRNIES--QLNRLARKKVRIVFDDVTS------------- 261
                   KL SEL K+  +  N+ S   + RL  +KV IV D++ S             
Sbjct: 243 --------KLFSELLKEEISPSNVGSAFHMRRLRSRKVLIVLDNMDSLDQFEYLCRDYGE 294

Query: 262 ---GSRVIITTRDKQVLKN--CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
               SR+IITTRD+Q+L     W    Y +K+  Y  + +LFC  AF   +    +  L 
Sbjct: 295 LNKDSRLIITTRDRQLLSGRVDWI---YEVKQWEYPKSLELFCLEAFEPSNPREKYEHLL 351

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            +AI YA GVPLALK+L  +L  R    WES+ +KL+     ++ +VLK+SYD LD  +K
Sbjct: 352 QRAITYAGGVPLALKLLALHLRTRDIAFWESSFKKLDDHRDDKLHKVLKVSYDELDALEK 411

Query: 377 NVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
            +FLDIA F  GE ++ V  I DA              K+LI +     I+MHDLL+ MG
Sbjct: 412 KIFLDIAFFFIGEKKESVTKILDACGFEPNSGIVVLKDKALITISNNQTIQMHDLLQKMG 471

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            +I+  +    P    RL   K    V+++N G+ +IEGI+LD+++ N ++ +++  F+K
Sbjct: 472 SDIICNDCGEDPAAHTRLSGSK-ARAVIEENKGSSSIEGITLDLSQ-NNDLPLSADTFTK 529

Query: 484 MPKLRFLRFYGDKN--KCMVSHLEGVPFAE-----VRHLEWPQCPLKTL--NICAEKLVS 534
           M  LR L+F+   N  +C  ++L    F E     +R+ EW   P ++L  +  A+ LV 
Sbjct: 530 MKALRILKFHAPSNLQRCTNTYLNLPKFLEPFSNKLRYFEWNGYPFESLPQHFYAKFLVE 589

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLTVK 589
           ++MP + V+QLW   + L             E ID   CK  E+LP+  +  +L+++ + 
Sbjct: 590 IRMPHSNVKQLWQGTKELGK----------LEGIDLSECKQFEKLPNFSKASSLKWVNLS 639

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP--- 645
           G  ++ +L  S+     +  LIL   + + R+    +HL+ L  + +  C+ L+      
Sbjct: 640 GCESLVDLHPSVLCADTLVTLILDRCTKVRRV-RGEKHLNFLEKISVDGCKSLEEFAVSS 698

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF-LKLDPNELSEI 694
           +L  NL L S    T ++ L   +  +  +  +NL +  L   P ELS +
Sbjct: 699 DLIENLDLSS----TGIKTLDLSIGRLQKLKQLNLESLRLNRIPKELSSV 744



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 175/380 (46%), Gaps = 50/380 (13%)

Query: 512  VRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEI---- 567
            + +L+     +KTL++   +L  LK     +E L   + R+P  L + ++    +I    
Sbjct: 701  IENLDLSSTGIKTLDLSIGRLQKLKQ--LNLESLR--LNRIPKELSSVRSIRELKISGSR 756

Query: 568  --IDCKMLERLPDELENLEYLTVKGTTIR-ELPESLGRLSWVKRLILSNNSNLERIPESI 624
              ++ K L  L D L++L+ L +K    + ELP ++   S +  L L + SN++ +P+SI
Sbjct: 757  LIVEKKQLHELFDGLQSLQILHMKDFINQFELPNNVHVASKLMELNL-DGSNMKMLPQSI 815

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL-----YVN 679
            + L +L  L + +C +L+ +PELP  + LL+A NCTSL  + + L  +++ +     +++
Sbjct: 816  KKLEELEILSLVNCRKLECIPELPPLITLLNAVNCTSLVSV-SNLKKLATKMIGKTKHIS 874

Query: 680  LCNFLKLDPNELSEIVK--DGWMKHSLYEERGIK------KSMYFP-------GNEIPKW 724
              N L LD + L  I++  +  M  +++    ++      +S  +        G  IP+ 
Sbjct: 875  FSNSLNLDGHSLGLIMESLNLTMMSAVFHNVSVRRLRVAVRSYNYNSVDACQLGTSIPRL 934

Query: 725  FR-HQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAV 783
            F+   +  SS T+   P R    + L+ F + +VV+ PA     +              +
Sbjct: 935  FQCLTASDSSITITLLPDR----SNLLGFIY-SVVLSPAGGNGMKGGGAR---------I 980

Query: 784  CCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYD-EFSFRIHCSFHFPP 842
             C      EG   +W    ++ + SDHV++  + F  +     Y  E  F  + +     
Sbjct: 981  KCQCNLGEEGIKATWLNTDVTELNSDHVYVWYDPFHCDSILKFYQPEICFEFYVTNDTGR 1040

Query: 843  YLERG-EVKKCGIHFVYAQD 861
             ++    +K+CG+  V  Q+
Sbjct: 1041 EVDGSVGIKECGVRLVSVQE 1060


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus
           trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus
           trichocarpa]
          Length = 1778

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 224/614 (36%), Positives = 329/614 (53%), Gaps = 73/614 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR+NFTSHL+  L  + I  ++DD+ L RG  I  +L   IE S  +I+
Sbjct: 71  YDVFLSFRGKDTRNNFTSHLYSNLEQRGIDVYMDDRGLERGKTIEPALWQAIEDSRFSIV 130

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS V  Q  ++ + F   +++ 
Sbjct: 131 VFSRDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVADQKGNYKKAFIEHKEKH 190

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               +K+K W + L+  A+LSG+D    R ES+ I++I   +  +L  T  + +K LVG+
Sbjct: 191 SGNLDKVKCWSDCLSTVANLSGWDVRN-RDESQSIKKIVEYIQCKLSFTLPTISKNLVGI 249

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-E 215
           +  ++ +   +   +     + I G+GG+ K T+A  ++++I   F GS F  NVRE   
Sbjct: 250 DSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVFA 309

Query: 216 ETGGIKDLQKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
           E  G+  LQ++LLSE+S +      + R I+    RL  KKV ++ DDV           
Sbjct: 310 EKDGLCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLILDDVDDEEQLQMLAA 369

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IIT+R+K VL +    + Y   +L   DA  LF   AF  D       E
Sbjct: 370 EHGTFGPGSRIIITSRNKHVLDSHGVTRIYEADKLNDKDALMLFSWKAFKRDQPAEDLSE 429

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L+ + + YA G+PLAL+V+G +L  R    W+SA+ ++  IP  +I +VL+IS+D L + 
Sbjct: 430 LSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFDGLHEL 489

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY----RIRMHDLLRDM 422
           +K +FLDIACFL+G  +D +  + D+         ++LI   L       IRMH+LL+ M
Sbjct: 490 EKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKSLIRVSRDEIRMHNLLQKM 549

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G EIVR ES   PG+R+RL  +KD+   LK +TG   IE I +D+ K  +E   N  AFS
Sbjct: 550 GEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGK--IESIFVDLPKA-KEAPWNMTAFS 606

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
           KM KLR L+ +       V   EG  +   E+R LEW   P K+L  C   + LV L M 
Sbjct: 607 KMTKLRLLKIHN------VDLSEGPEYLSNELRFLEWHAYPSKSLPACFRLDDLVELYMS 660

Query: 539 CTKVEQLWDDVQRL 552
           C+ +EQL D+ Q +
Sbjct: 661 CSSIEQLCDESQSI 674



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 212/642 (33%), Positives = 327/642 (50%), Gaps = 96/642 (14%)

Query: 127  ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS 186
            ES+ I++IA  +  +L  T Q+ +K LVG++  ++ +   +   +     + I G+GG+ 
Sbjct: 670  ESQSIKKIAEYIQCKLSFTLQTISKNLVGIDSRLKVLNEYIDEQATDTLFIGICGMGGMG 729

Query: 187  KITIAGAVFNKISRHFEGSYFALNVRE--AEETGGIKDLQKKLLSELSKD-----GNMRN 239
            K T+A  ++++I   F+GS F  NVRE  AE+ G  + LQ++LLSE+S +      + R 
Sbjct: 730  KTTVARVMYDRIRWQFQGSCFLANVREVFAEKDGRCR-LQEQLLSEISMELPTARDSSRR 788

Query: 240  IESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKK 283
            I+    RL  KKV ++ DDV                  GSR+IIT+R+K VL +    + 
Sbjct: 789  IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRI 848

Query: 284  YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
            Y   +L   DA  LF   AF  D       EL+ + + YA G+PLAL+V+G +L  R   
Sbjct: 849  YEADKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLR 908

Query: 344  VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--- 400
             W+SA+ ++  IP  +I +VL+IS+D L + +K +FLDIACFL+G  +D +  + D+   
Sbjct: 909  EWKSAIDRMNDIPDRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRIARLLDSCGF 968

Query: 401  ----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                       KSLI++     IRMH+LL+ MG EIVR ES   PG+R+RL  +KD+   
Sbjct: 969  HADIGMQALIEKSLISVSR-DEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDA 1027

Query: 451  LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF- 509
            L+ +  TE I+ I LD+ K  +E   N  AFSKM KLR L+ +       V   EG  + 
Sbjct: 1028 LEDS--TEKIQSIFLDLPKA-KEAQWNMTAFSKMTKLRLLKIHN------VDLSEGPEYL 1078

Query: 510  -AEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFE 566
              E+R LEW   P K+L  C   ++LV L M C+ +EQLW          C  K  +  +
Sbjct: 1079 SKELRFLEWHAYPSKSLPACFRPDELVELYMSCSSIEQLW----------CGCKILVNLK 1128

Query: 567  IIDCK---MLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERI 620
            II+      L   PD   + NLE L ++G  ++ E+  S GR   ++ + L N  +L  +
Sbjct: 1129 IINLSNSLYLINTPDFTGIPNLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRIL 1188

Query: 621  PESIRHLSKLTFLFISHCERLQTLPELPCNLG--------------------------LL 654
            P ++  +  L    +S C +L   P++  N+                           LL
Sbjct: 1189 PSNL-EMESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLL 1247

Query: 655  SARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
            S  NC +LE +P+ +  + S+  L V+ C+ LK  P  L E+
Sbjct: 1248 SMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEV 1289



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 108/271 (39%), Gaps = 72/271 (26%)

Query: 528  CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLE 584
            C   LV L M   K      +++ +PSS+   K+    ++ DC  L+ +P+   E+E+LE
Sbjct: 1240 CLAGLVLLSMNNCK------NLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLE 1293

Query: 585  YLTVKGTTIRE------LPESLGRLSW--VKRLI----------LSNNSNLERI------ 620
                 GT+IR+      L ++L  LS+   KR+           LS   +LE +      
Sbjct: 1294 EFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRIAVNLTDQILPSLSGLCSLEELDLCACN 1353

Query: 621  -----------------------------PESIRHLSKLTFLFISHCERLQTLPELPCNL 651
                                         P+SI  LS+L  L +  C  L++LPE+P  +
Sbjct: 1354 LGEGAVPEDIGCLSSLRSLNLSRNNFISLPKSINQLSRLEKLALKDCVMLESLPEVPLKV 1413

Query: 652  GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
              +    C  L+++P  +   S    +    F  L+  EL        M  ++ E+    
Sbjct: 1414 QKVKLDGCLKLKEIPDPIKLCS----LKRSEFKCLNCWELYMHNGQNNMGLNMLEKYLQG 1469

Query: 712  KS------MYFPGNEIPKWFRHQSMGSSATL 736
             S      +  PGNEIP WF HQS  S   L
Sbjct: 1470 SSPRPGFGIAVPGNEIPGWFTHQSCNSMQAL 1500


>gi|357499615|ref|XP_003620096.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495111|gb|AES76314.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1104

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 242/754 (32%), Positives = 380/754 (50%), Gaps = 108/754 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  K I+TFIDD +L  GD I+ SL   IE S I I 
Sbjct: 20  YDVFLSFRGSDTRYGFTGNLYKDLCKKGIRTFIDDRELPGGDKITPSLFKAIEESRIFIP 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY V+PS+VR Q  S+G+  +   ++F
Sbjct: 80  VLSINYASSSFCLDELVHIIHCCKKNGRLVLPIFYDVEPSNVRHQIGSYGKALAEHIEKF 139

Query: 100 P------EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                  E++++WK+ALT+ A+ SG   S+    E + IE+I   +  +++         
Sbjct: 140 QNSTDNMERLQKWKSALTQTANFSGHHFSSRNGYEYEFIEKIVKYLSSKINRVPLYVADY 199

Query: 153 LVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG+E  + ++   L +GS GV   L I+G GG+ K T+A AV+N I+  F+   F  +V
Sbjct: 200 PVGLESRVLKVNKFLDVGSTGVVHMLGIYGTGGMGKTTLARAVYNSIADQFDCLCFLHDV 259

Query: 212 REAEETGGIKDLQKKLLSELSK-DGNMRNIESQL----NRLARKKVRIVFDDV------- 259
           RE     G++ LQ+KLLS+L + D  + +I   +     RL R KV ++ DDV       
Sbjct: 260 RENSTKYGLEHLQEKLLSKLVELDIELGDINEGIPIIKKRLHRNKVLLILDDVHELKQLQ 319

Query: 260 ---------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVI+TTRD+ +LK+    + Y + +L   +A +L    +F  + +D+
Sbjct: 320 VLAGGLDWFGPGSRVIVTTRDRHLLKSHGIERAYELPKLNETEALELLRWNSFKNNKVDS 379

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           +   +   A+ YA G+PLAL+V+G  L G +   W+SA+ +   IP  +I+E+LK+S+D+
Sbjct: 380 NFDGVLRCAVTYASGLPLALEVVGSNLFGNNIGEWKSALDRYRRIPIKKIQEILKVSFDA 439

Query: 371 LDDSQKNVFLDIACFLEGEHRDEV---------------ISIFDASKSLINLDLF---YR 412
           L+  ++NVFLDIAC  +G +  E+               IS+ D  KSLI ++ +   Y 
Sbjct: 440 LEKDEQNVFLDIACCFKGYNLKELEDILYAHYGNCMKYQISVLD-EKSLIKINRYEGNYV 498

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + +H L+  MG+EIV ++S N PG+ +RLW HKDI  VL++N G+  IE I L+      
Sbjct: 499 VTLHFLIEKMGKEIVNEKSPNEPGRHSRLWFHKDIIDVLEENQGSSEIEIIYLEFPSSEE 558

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           E+    +   ++ K+  L+    KN    +  + +P   +R LEWP+ P   +  + C +
Sbjct: 559 EV--VDWEGDELKKMENLKTLIVKNGTFSNGPKYLP-NSLRVLEWPKYPSPVIPSDFCPK 615

Query: 531 KLVSLKMPCTKVEQLWDDVQ-RLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           KL   K+      Q  D +      ++  F       + DC+ L R+ D   L NLE  +
Sbjct: 616 KLSICKL------QQSDFISFGFHGTMKRFGNVRELNLDDCQYLTRIHDVSNLPNLEIFS 669

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
            +                          NL  I ES+  L+KL  L   +C +L++ P +
Sbjct: 670 FQFC-----------------------KNLIEIHESVGFLNKLQILNAVNCSKLRSFPAM 706

Query: 648 -PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
              +L  L    CTSL+  P  L  M ++ +++L
Sbjct: 707 KSASLRRLGLAYCTSLKTFPEILGEMKNITHISL 740


>gi|28558778|gb|AAO45749.1| MRGH63 [Cucumis melo subsp. melo]
          Length = 943

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 242/709 (34%), Positives = 361/709 (50%), Gaps = 89/709 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR NFTSHL+  L  + I  FID +L RG+ IS SLL  IE S ++II+
Sbjct: 17  FDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEISSSLLEAIEESKVSIIV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
            SE YASS W                      FY+VDPS V  QS  FG  F++L  RF 
Sbjct: 77  ISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGNQSGRFGEEFAKLEVRFS 136

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD-ATFQ-SKNKGLVGVE 157
            +KM+ WK AL   + +SG+       E+ LI+ I  +V K LD AT Q    K  VG++
Sbjct: 137 SDKMEAWKEALITVSHMSGWPVLQRDDEANLIQNIVQEVWKELDRATMQLDVAKYPVGID 196

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE-E 216
             +  +  L  + S G   + ++GIGG+ K T+A A++NKI+  FEG  F  N+REA  +
Sbjct: 197 IQVRNL--LPHVMSNGTTMVGLYGIGGMGKTTLAKALYNKIADDFEGCCFLPNIREASNQ 254

Query: 217 TGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS--------- 261
            GG+  LQ++LL E+  D ++      R +    NRL  KK+ ++ DDV +         
Sbjct: 255 YGGLVQLQRELLREILVDDSIKVSNLPRGVTIIRNRLYSKKILLILDDVDTREQLQALVG 314

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GS+VI TTR+KQ+L     +K   +  L Y +A +LF    F   H    ++E
Sbjct: 315 GHDWFGHGSKVIATTRNKQLLVTHGFDKMQSVVGLDYDEALELFSWHCFRNSHPLNDYLE 374

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLE-IIPHVEIEEVLKISYDSLD 372
           L+ +A+ Y +G+PLAL+VLG +L        ++  + + E      EI++ L+ISYD L+
Sbjct: 375 LSKRAVDYCKGLPLALEVLGSFLHSIDDPFNFKRILDEYEKYYLDKEIQDSLRISYDGLE 434

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS---------KSLINLDL-----FYRIRMHDL 418
           D  K +F  I+C    E  ++V  + +A            L+NL L     F R+ MHD+
Sbjct: 435 DEVKEIFCYISCCFVREDINKVKMMLEACGCICLEKGITKLMNLSLLTIGRFNRVEMHDI 494

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           ++ MGR I   E+ +   KR RL    D   VLK N    A++ I  +  K   E+ ++S
Sbjct: 495 IQQMGRTIHLSET-SKSHKRKRLLIKDDAMNVLKGNKEARAVKVIKFNFPKPT-ELDIDS 552

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF K+  L  L   G+      + LE +P + +R + WPQ P  +L      E LV LK
Sbjct: 553 RAFEKVKNLVVLEV-GNATSSKSTTLEYLP-SSLRWMNWPQFPFSSLPPTYTMENLVELK 610

Query: 537 MPCTKVE---QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
           +P + ++   Q +   +RL              + D   L  +PD     NL+YL + G 
Sbjct: 611 LPYSSIKHFGQGYMSCERLKE----------INLTDSNFLVEIPDLSTAINLKYLDLVGC 660

Query: 592 -TIRELPESLGRLSWVKRLILSNN-SNLERIPESIRHLSKLTFLFISHC 638
             + ++ ES+G L+ +  L LS++    E+ P  ++ L  L FL + +C
Sbjct: 661 ENLVKVHESIGSLNKLVALHLSSSVKGFEQFPSHLK-LKSLKFLSMKNC 708



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 576 LPDELENLEYLTVKGTTIRELPESLGRLSWV----KRLILSNNSNLERIPESIRHLSKLT 631
           LP  L  L  L + G  I  L + L  + +V    K L LS N N  R+P  I +   L 
Sbjct: 793 LPSSLFYLTKLRLVGCKITNL-DFLETIVYVAPSLKELDLSEN-NFCRLPSCIINFKSLK 850

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
           +L+   CE L+ + ++P  +   SA  C SL + P  L+   S
Sbjct: 851 YLYTMDCELLEEISKVPEGVICTSAAGCKSLARFPDNLADFIS 893


>gi|297836396|ref|XP_002886080.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331920|gb|EFH62339.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1098

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 262/907 (28%), Positives = 416/907 (45%), Gaps = 171/907 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R +F SH         I  F D +++R   I+ SL   I  S I+I+I
Sbjct: 12  YRVFASFHGPDVRKSFLSHFRKQFISNGITMFDDQKIVRSQTIAPSLTQGIRESRISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPS VRKQ+  FG  F++   +R 
Sbjct: 72  LSKNYASSTWCLDELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRT 131

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ + W  AL +  +++G        E+++IE+IA DV ++L+AT  S   G+VG+E  
Sbjct: 132 KEERRNWSQALNDVGNIAGEHFLNWDNEAEMIEKIARDVSEKLNATPSSDFDGMVGMEAH 191

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           ++EIE LL +  +GV  + I+G  GI K TIA A+ + I   F+ + F  N+  +   G 
Sbjct: 192 LKEIELLLDVDYDGVKVVGIFGPAGIGKTTIARALHSLIFNKFQLTCFVENLSGSYSIGL 251

Query: 219 ---GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----------- 261
              G+K  LQ+ LLS++ K   MR  ++ +   RL   KV IV DDV             
Sbjct: 252 DEYGLKLRLQEHLLSKILKLDGMRISHLGAVKERLFDMKVLIVLDDVNDVKQLEALANDT 311

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSRVI+TT +K++L+    +  Y +       A ++ C++AF           L 
Sbjct: 312 TWFGPGSRVIVTTENKEILQRHGIDNTYHVGFPSDEKAIEILCRYAFKQSSPRRGFKYLA 371

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
                    +PL L+V+G  L G++++ W S +R+LE I   +IEEVL++ Y+SL ++++
Sbjct: 372 KNVTWLCGNLPLGLRVVGSSLHGKNEDEWVSVIRRLETIIDRDIEEVLRVGYESLHENEQ 431

Query: 377 NVFLDIACFLEGEHRDEV--------ISIFDASKSLINLDLFY-----RIRMHDLLRDMG 423
           ++FL IA F   +  D V        + I    K ++N  L Y      IRMH LL+ +G
Sbjct: 432 SLFLHIAVFFNNKDVDLVKAMLADDNLDIAHGLKIMVNKSLIYVSTNGEIRMHKLLQQVG 491

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           ++ + ++    P KR  L + ++I  VL+ + GT  + GIS D + ++ E+ +++ A  +
Sbjct: 492 KQAINRQ---EPWKRLILTNAQEICHVLENDKGTGVVSGISFDTSGIS-EVILSNRALRR 547

Query: 484 MPKLRFLRFYG---DKNKCMVSHL-EGVPF-AEVRHLEWPQCPLKTLNI--CAEKLVSLK 536
           M  LRFL  Y    D N  M  H+ + + F   +R L W   P K+L +  C E LV L 
Sbjct: 548 MCNLRFLSVYKTRHDGNDIM--HIPDDMKFPPRLRLLHWEAYPSKSLPLGFCLENLVELN 605

Query: 537 MPCTKVEQLWDDVQ----------------------------------------RLPSSL 556
           M  +++E+LW+  Q                                         LP+S+
Sbjct: 606 MKDSQLEKLWEGTQLLRNLKKMDLSRSVHLKELPDLSNATNLERLELGDCMALVELPTSI 665

Query: 557 CTFKTPITFEIIDCKMLERLPDELE-----------------------NLEYLTVKGTTI 593
                     + +C  LE +P  +                        N+E L ++GT++
Sbjct: 666 GNLHKLENLVMSNCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNIERLLLRGTSV 725

Query: 594 RELPESLGRLSWVKRLILSNNSNL--------------------ERIPESIRHLSKLTFL 633
            ++P S+   S +    + +N +L                    E IP+ I+    L  L
Sbjct: 726 EDVPASISHWSRLSDFCIKDNGSLKSLTHFPERVELLTLSYTDIETIPDCIKGFHGLKSL 785

Query: 634 FISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
            ++ C +L +LPELP +LGLL A +C SLE +   L++ S+ L  N  N  KLD      
Sbjct: 786 DVAGCRKLTSLPELPMSLGLLVALDCESLEIVTYPLNTPSARL--NFTNCFKLDEESRRL 843

Query: 694 IVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
           I++    +        +      PG  +P  F H++ G+S T++         +  +SF 
Sbjct: 844 IIQRCATQF-------LDGFSCLPGRVMPNEFNHRTTGNSLTIR--------LSSSVSFK 888

Query: 754 FCAVVVF 760
           F A VV 
Sbjct: 889 FKACVVI 895


>gi|224123354|ref|XP_002319058.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857434|gb|EEE94981.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 522

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 201/518 (38%), Positives = 281/518 (54%), Gaps = 71/518 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I TF DD +L +G+ IS  LL  I+ S I+I+
Sbjct: 10  YDVFLSFRGEDTRKNFTDHLYTALQNAGIHTFRDDNELPKGEEISSHLLKAIKESKISIV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY +DPS +RKQ+ SF   F R  +RF
Sbjct: 70  VFSKGYASSTWCLDELSEILDCRQTAGQIVLPVFYDIDPSDIRKQTGSFAEAFDRHEERF 129

Query: 100 PEKM---KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E+M   ++W+ AL EA  LSG D + I    ESKLI+ I  +VL +L+  +       V
Sbjct: 130 KEEMEKVQKWRKALVEAGRLSGLDLHSIANGHESKLIQMIVEEVLSKLNPRYMKVATYPV 189

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G++  +++I S+LC+G+  V  + I+G+ GI K TIA AVFN+I   FEGS   LN+RE 
Sbjct: 190 GIDSQVKDIISMLCVGTNEVRIVGIYGMPGIGKTTIAKAVFNQICHQFEGSSCLLNIRER 249

Query: 214 --------AEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS---- 261
                     +   ++D  K  +  +  D +   I+SQ     RK+V ++ DDV      
Sbjct: 250 LDQHRGLLQLQQQLLRDAFKGYI-RIHDDDDEDGIKSQF---CRKRVLVILDDVDQLKHL 305

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR++ITTRD+++L      K+Y  + L   ++ +LF   AF   H  
Sbjct: 306 RGLAGERDWFGPGSRIVITTRDERLLTRLEVEKQYHAEGLNNDESLQLFSWHAFKKPHPM 365

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI-IPHVEIEEVLKISY 368
             ++EL+   + Y  GVPLAL+VLG  L  RS   W S + KL+  +PH +I+  L  S 
Sbjct: 366 KEYVELSKVVVDYVGGVPLALEVLGSKLFKRSITHWRSFIEKLQKHLPH-QIQRQLITSL 424

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D LD   K +FLDIACF  G  +D V  I D               +SL+ ++    ++M
Sbjct: 425 DDLDGEVKGMFLDIACFFNGMDKDYVGKILDGRGFYPEMGFDILRERSLLTVNSENELQM 484

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
            +LLRDMGREI+ + + NHPGKR+RLWH +DI  VL K
Sbjct: 485 DNLLRDMGREIIHQMAPNHPGKRSRLWHREDIMDVLDK 522


>gi|227438225|gb|ACP30602.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 938

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 233/756 (30%), Positives = 369/756 (48%), Gaps = 99/756 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +Y VFLSFRGED R  F SH+      K I  FID+++ RG ++   L+  I  S +A++
Sbjct: 16  LYHVFLSFRGEDVRKGFLSHVLKEFKSKGINVFIDNEIKRGQSVGPELVKAIRHSRVAVV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS W                      FY VDPS VRKQ+  FG+ F       
Sbjct: 76  LLSRNYASSSWCLDELVEIMKCREEVGQTVLTIFYNVDPSEVRKQTGDFGKAFDETCVGK 135

Query: 100 PEKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E++K+ W+ AL + A ++G+ S+    E+ LI ++A+DV+  L  T  +     VG+  
Sbjct: 136 TEEVKKAWRQALNDVAGIAGYHSSNCGNEADLINKVASDVMAVLGFTPSNDFDDFVGMGA 195

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            + EI+S + + SE V  + I+G  GI K T A  ++N++S  F  S F  ++R + E  
Sbjct: 196 RVTEIKSKIILQSELVKVIGIFGPAGIGKTTTARVLYNQLSHAFPFSTFLEDIRGSYEKP 255

Query: 219 GIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
              D      LQK LL ++    D  +R++      L+ KKV +V D+V +         
Sbjct: 256 CGNDYRLKLRLQKNLLCQIFNQSDIEVRHLRGAQEMLSDKKVLVVLDEVDNWWQLEEMAK 315

Query: 262 -------GSRVIITTRDKQVLK--NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                  GS +IITT D+++LK     ++  Y+M      ++ ++FCQ+AFG    D   
Sbjct: 316 QPGWVGPGSMIIITTEDRKLLKALGLGSDHIYKMNFPTEDESLQIFCQYAFGQKSPDDGF 375

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L  +       +PL L+V+G YL G SK+ W  A+  L      EIE  L+ SYD+L 
Sbjct: 376 ESLAREVTWLVGDLPLGLRVMGSYLRGMSKDEWIEALPWLRSTLDREIESTLRFSYDALR 435

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFY-RIRMHDL 418
           D++K +FL +AC   G +   + S F              A KSLI +D  + R+ MH L
Sbjct: 436 DNEKTLFLHVACLFGGFYASSIKSYFANSSLEVNHGLEVLAQKSLITIDHKHERVHMHIL 495

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+ MGREIV+K+   +PGKR  LW  KDI  VL ++T T  + GI  +      EI +N 
Sbjct: 496 LQQMGREIVKKQCTENPGKRQFLWDTKDISHVLDEDTATGNVLGI--NTTWTGEEIQINK 553

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
            AF  M  L+FL  +          L+ +P  ++  L W + PL+        + LV L+
Sbjct: 554 SAFQGMNNLQFLLLFSYSTIHTPEGLDCLP-DKLILLHWDRSPLRIWPSTFSGKCLVELR 612

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           M  +K E LW+ ++ L S L T     +++      L+++PD                  
Sbjct: 613 MQNSKFEMLWEGIKPL-SCLRTLDLSSSWD------LKKIPD------------------ 647

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
              L + + ++ L L +  +L  +  SI   +KL +L IS C +++  P +P ++ +L  
Sbjct: 648 ---LSKATSLEVLQLGDCRSLLELTSSISSATKLCYLNISRCTKIKDFPNVPDSIDVLVL 704

Query: 657 RNCTSLEKLPAGLSSMSSV--LYVNLCNFLK-LDPN 689
            + T ++ +P  + ++  +  L +N C  LK + PN
Sbjct: 705 SH-TGIKDVPPWIENLFRLRKLIMNGCKKLKTISPN 739



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)

Query: 617 LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
           ++ IP+ I  LS LT L +  C RL  LP LP +L  L A+ C SL+++ +  S  +  +
Sbjct: 822 IKTIPDCIGRLSGLTKLDVKECRRLVALPPLPDSLLYLDAQGCESLKRIDSS-SFQNPEI 880

Query: 677 YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
            +N    + L   +  ++++    K+++            PG E+P  F H++  SS T+
Sbjct: 881 CMNFAYCINLK-QKARKLIQTSACKYAV-----------LPGEEVPAHFTHRASSSSLTI 928

Query: 737 K-TRPPRPA 744
             T+ P P+
Sbjct: 929 NSTQRPLPS 937


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 267/815 (32%), Positives = 407/815 (49%), Gaps = 122/815 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR   T HL+  L  KSIKT+ID QL RG+++  +L   IE S I+II+
Sbjct: 17  YDVFISFRGEDTRFGITDHLYDALIHKSIKTYIDYQLNRGEDVWPALSKAIEDSYISIIV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE +A+S+W                      FY+ DPSH+R Q  S+   F++  +   
Sbjct: 77  FSENFATSKWCLEELVKVLECRKDHGQIVIPVFYKADPSHIRNQKASYETAFAKHERELG 136

Query: 100 -------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                    K+ +WK ALTEAA++SG+DS+    ES LI +I NDVL++L   + ++ +G
Sbjct: 137 TKDSISNKSKVLKWKAALTEAANISGWDSHTYEKESILILKIVNDVLEKLQLRYPNELEG 196

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +V  E + E +ESLL    +    L IW +GG+ K TIA   F K    ++   FA N +
Sbjct: 197 VVRNEKNSECVESLL----KKFRILGIWSMGGMGKTTIAKVFFAKHFAQYDHVCFA-NAK 251

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFD--------------- 257
           E   +  + +L K+ +S  + D     I   + RL  +KV IV D               
Sbjct: 252 EYSLSRLLSELLKEEIS--ASDVVKSTI--HMRRLRSRKVLIVLDNVESSDQFDYLCRDY 307

Query: 258 -DVTSGSRVIITTRDKQVLKN--CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
            D+T  SR+IITT+DKQ+L+    W    Y +K      + +LFC  AF   +    +  
Sbjct: 308 HDLTQDSRLIITTKDKQLLRGRVDWI---YEVKHWEDPKSLELFCLEAFEPSNPREKYEH 364

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  KAI YA GVPLALK+L  +L  R  E W S+ +KL+  P   + +VL++SYD LD  
Sbjct: 365 LLQKAITYAGGVPLALKLLALHLRSREIEFWVSSFKKLDKYPDGRLHKVLRVSYDELDAL 424

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           QK +FLDIA F  GE ++ V  I DA              K+LI +   + I+MHDLL+ 
Sbjct: 425 QKKIFLDIAFFFIGEKKERVTKILDACGFEPNSGIVVLKDKALITVSNNHTIQMHDLLQK 484

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG +I+  +    P    RL      ++V+++N G+ +IEGI LD+++ N  + + S  F
Sbjct: 485 MGSDIICNDCGEDPATHTRL-SGTAAFEVIEENKGSSSIEGIMLDLSQ-NNVLPLTSDTF 542

Query: 482 SKMPKLRFLRFYGDKN--KCMVSHLEGVPF-----AEVRHLEWPQCPLKTL--NICAEKL 532
           +KM  LR L+F+   +  KC +++     F      ++R+ EW   P ++L     A+ L
Sbjct: 543 TKMKALRILKFHAPSSLQKCTITYPYLPKFLKLFSKKLRYFEWYGYPFESLPQPFHAKFL 602

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLT 587
           V ++MP + V+QLW  ++ L             E ID   CK L +LPD  +  +L+++ 
Sbjct: 603 VEIRMPHSNVKQLWQGMKELGK----------LEGIDLSECKHLIKLPDFSKASSLKWVN 652

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP- 645
           + G  ++ +LP S+     +  LIL   + +  +    +HL+ L  + +  C+ L+    
Sbjct: 653 LSGCESLVDLPPSVLCADMLVTLILHRCTKITSV-RGEKHLNCLEKISVDGCKSLKIFAV 711

Query: 646 --ELPCNLGLLSARNCT------SLEK-------------LPAGLSSMSSVLYVNLCNFL 684
              L  NL L S    T      SLEK             LP GLSS++S+  + +    
Sbjct: 712 SSNLIENLDLSSTGIQTLDLSIGSLEKLKRLNLDSLKLNCLPEGLSSVTSISELKISGSA 771

Query: 685 KLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
            +   +L E + DG     +   +        P N
Sbjct: 772 LIVEKQLLEELFDGLQSLQILHMKDFINQFELPNN 806



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 40/331 (12%)

Query: 512  VRHLEWPQCPLKTLNICA---EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEII 568
            + +L+     ++TL++     EKL  L +   K+  L + +  + +S+   K   +  I+
Sbjct: 716  IENLDLSSTGIQTLDLSIGSLEKLKRLNLDSLKLNCLPEGLSSV-TSISELKISGSALIV 774

Query: 569  DCKMLERLPDELENLEYLTVKGTTIR-ELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            + ++LE L D L++L+ L +K    + ELP ++  LS +K L L + SN++R+PESI+ L
Sbjct: 775  EKQLLEELFDGLQSLQILHMKDFINQFELPNNIHVLSKLKELNL-DGSNMKRLPESIKKL 833

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP--AGLSS--MSSVLYVNLCNF 683
             +L  L + +C  L+ +PELP  + LL+A NCTSL  +    GL++  M    +++  N 
Sbjct: 834  EELEILSLVNCRELECIPELPPLVTLLNAVNCTSLVSVSNLKGLATMMMGKTKHISFSNS 893

Query: 684  LKLDPNELSEIVK--DGWMKHSLYEERGIKK-------------SMYFPGNEIPKWFRHQ 728
            L LD + LS I++  +  M  ++++   +++                 PG  IP+ F+ Q
Sbjct: 894  LNLDGHSLSLIMENLNLTMMSAVFQNVSVRRLRVKVHSYNYNSVDACRPGTSIPRLFKCQ 953

Query: 729  SMG-SSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDW 787
            +   SS T+   P R    + L+ F + +VV+ PA         G +        + C  
Sbjct: 954  TAADSSITITLLPER----SNLLGFIY-SVVLSPA---------GGNGMKKGEARIKCQC 999

Query: 788  KRKSEGHLYSWFLGKISYVESDHVFLGCNSF 818
                EG   SW    ++ + SDH ++  + F
Sbjct: 1000 SLGKEGIKASWLNTHVTELNSDHTYVWYDPF 1030


>gi|227438227|gb|ACP30603.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1056

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 233/734 (31%), Positives = 361/734 (49%), Gaps = 106/734 (14%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +Y VFLSF G D R  F SH+   L  K +  F DD++ RG++I Q L+  I  S  AI+
Sbjct: 14  LYHVFLSFHGPDVRKGFLSHVRKELKSKGLIVFFDDEIKRGESIDQELVEAIRQSRTAIV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y SS W                      FY VDPS VRKQ+  FG+ F +     
Sbjct: 74  LLSPNYTSSSWCLNELVEIIKCREEDRQTVLTIFYEVDPSDVRKQTGVFGKLFKKTCVGK 133

Query: 100 PEKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            EK+K+ WK AL + A ++G+ S+    E+ LI+++A+DV+  L  T        VG+  
Sbjct: 134 TEKVKKAWKQALEDVAGIAGYHSSNCANEADLIKKVASDVMAVLGFTPSKDFDDFVGIRA 193

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            I EI+S L I SE V  + + G  GI K T A  ++N++S  F+ + F  N+R + E  
Sbjct: 194 RITEIKSKLIIQSEEVKVIGVVGPAGIGKTTTARVLYNQLSPDFQFNTFLENIRGSYEKP 253

Query: 219 GIKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS--------- 261
              D      LQK LLS++   G++   ++      L+ KKV +V D+V +         
Sbjct: 254 CGNDYQLKLRLQKNLLSQIFNKGDIEVLHLGRAQEMLSDKKVLVVLDEVDNWWQVEEMAK 313

Query: 262 -------GSRVIITTRDKQVLK--NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   S ++ITT D+++L+      +  Y M   +  ++ ++FCQ+AFG  + D   
Sbjct: 314 QRAWVGPESIIVITTEDRKLLEALGLGIDHIYEMTYPISYESLQIFCQYAFGQKYPDNGF 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L  +    A  +PL L+V+G YL G S++ W  A+  L      EIE  L+ SY++L 
Sbjct: 374 ESLASEVTCLAGNLPLGLRVMGSYLRGMSRDKWIEALPWLRSTLDREIESTLRFSYNALR 433

Query: 373 DSQKNVFLDIACFLEG-----------------EHRDEVISIFDASKSLINLDLFYRIRM 415
           D+++ +FL IACF +G                  H  EV+    A KSLI+++   R++M
Sbjct: 434 DNERTLFLHIACFFDGFKVDSFKRCCANSSLEVNHGLEVL----AQKSLISIEK-GRVKM 488

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LLR MGREIV+K+S+ +PGK   L   K+I  VL ++T T  + GI L   +   +I 
Sbjct: 489 HRLLRQMGREIVKKQSMENPGKLQFLTDKKEISDVLDEDTATGNVLGIQL---RWGEKIQ 545

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           +N  AF  M  L+FL F      C+   L+ +P   +R L W  CPL+        + LV
Sbjct: 546 INRSAFQGMNNLQFLYFESFTTTCISEDLDCLP-DNLRLLYWRMCPLRVWPSKFSGKFLV 604

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
            L MP +K E LW+  + LP   C       F++     L+++PD  +  +LE L +   
Sbjct: 605 ELIMPNSKFEMLWEGTKPLP---CL----KIFDLSRSSNLKKVPDLSKATSLEELLLHHC 657

Query: 592 -TIRELPESLGRLSWVKRLILSN--------------------NSNLERIPESIRHLSKL 630
             + EL  S+G  + + RL +                      N+ ++ +P  I++L +L
Sbjct: 658 GNLLELTSSIGNATKLYRLDIPGCTHIKDFPNVSDSILELDLCNTGIKEVPPWIKNLLRL 717

Query: 631 TFLFISHCERLQTL 644
             L +  CE+L+T+
Sbjct: 718 RKLIMRRCEQLKTI 731



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 24/153 (15%)

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
           L N   ++ IP+ IR LS L  L +  C RL  LP L  +L  L A+ C SL+++ +   
Sbjct: 819 LRNRIGIKTIPDCIRRLSGLIKLDVKECRRLVALPPLQASLLSLDAQGCNSLKRIDS--- 875

Query: 671 SMSSVLYVNLC-NF-LKLDPNELS-EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
             SS+   N+C NF +  + N+ + ++++    K+++            PG E+P  F H
Sbjct: 876 --SSLQNPNICLNFDMCFNLNQRARKLIQTSACKYAV-----------LPGEEVPAHFTH 922

Query: 728 QSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF 760
           ++   S T+ +  PRP       SF F A ++ 
Sbjct: 923 RATSGSLTI-SLTPRPLTS----SFRFKACILL 950


>gi|297794603|ref|XP_002865186.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311021|gb|EFH41445.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1216

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 244/740 (32%), Positives = 369/740 (49%), Gaps = 83/740 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R +F SH    L  K I  F D+++ +  ++   L+  I+ S IA++
Sbjct: 12  VYDVFLSFRGEDVRVSFRSHFLKELDRKLITAFKDNEIKKSHSLWPELVQAIKESRIAVV 71

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPSHVR Q+  FGR F    ++  E+
Sbjct: 72  VFSKNYASSSWCLNELLEIVNCNDKIVIPVFYGVDPSHVRNQTGDFGRIFEETCEKNTEQ 131

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K RWK AL++ A++ GF S     E+K+IEEIANDVL +L  T        VG+E  I 
Sbjct: 132 VKNRWKKALSDVANMFGFHSATWDDEAKMIEEIANDVLGKLLLTTSKDFVNFVGIEDHIA 191

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVREAEE 216
           E+  LL + SE V  + IWG  GI K TIA A+FN++SR+F+ S      F    RE   
Sbjct: 192 EMSLLLQLESEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQVSKFIDKAFVYKSREIYS 251

Query: 217 TGGIKD------LQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
                D      LQ+  LSE  +  D  + ++     RL  +KV I+ DD+         
Sbjct: 252 GANPDDYNMKLHLQESFLSESLRMEDIKIDHLGVLGERLQHQKVLIIVDDLDGQVILDSL 311

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+I+ T DK  L+    +  Y +         ++ CQ AF  ++     
Sbjct: 312 VGQTQWFGSGSRIIVVTNDKHFLRAHRIDHIYEVTFPTEVQGFQMLCQSAFRQNYAPEGF 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L     ++A  +PL L VLG YL GR KE W   + +L+     +IE++L+ISYD L 
Sbjct: 372 GKLVVDVARHAGRLPLGLNVLGSYLRGRDKEYWIDMLPRLQNGLDDKIEKILRISYDGLV 431

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDLLR 420
            ++ +  F  IAC         + S+             A KSLI++   Y + MH  L+
Sbjct: 432 SAEDQATFRHIACLFNHMEVTTIKSLLGDSDVSIALQNLADKSLIHVRQGY-VVMHRSLQ 490

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           +MGR+IVR + I+ PGK+  L    DI  VL++  GT+ + GIS + ++++ E+H++  A
Sbjct: 491 EMGRKIVRTQFIDKPGKQEFLVDPNDICYVLREGIGTKKVLGISFNTSEID-ELHIHESA 549

Query: 481 FSKMPKLRFLRFYGDKN--KCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
           F+ M  LRFL     KN  K    HL    + +P   ++ L W + P+  +  N   + L
Sbjct: 550 FTGMRNLRFLDIDSSKNFRKKERLHLPESFDYLP-PTLKLLCWSKYPMSGMPSNFRPDNL 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L+M  +K+ +LW+ V        +F      +++  K L+ +PD     NLE L  + 
Sbjct: 609 VKLRMRKSKLHKLWEGV-------VSFTCLKEMDMLGSKYLKEIPDLSMATNLETLCFRN 661

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ EL  S+  L+ + RL +     L  +P    +L  L  L +  C  L+T PEL  
Sbjct: 662 CESLVELSSSIRNLNKLLRLDMGMCKTLTILPTGF-NLKSLDHLNLGSCSELRTFPELST 720

Query: 650 NLGLLSARNCTSLEKLPAGL 669
           N+  L     T++E+ P+ L
Sbjct: 721 NVSDLYLFG-TNIEEFPSNL 739



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 27/225 (12%)

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID------CKMLERLPDELENLEY 585
           LV L      + QL     R   +L T  T I    +D      C+ L   P+   N+  
Sbjct: 787 LVELPSSFQNLNQLKKLTIRNCRNLKTLPTGINLLSLDDLDFNGCQQLRSFPEISTNILR 846

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ--T 643
           L ++ T I E+P  + + S + RLI+ + S L+ +  +I  L  L  +  S+C  L    
Sbjct: 847 LELEETAIEEVPWWIEKFSNLTRLIMGDCSRLKCVSLNISKLKHLGEVSFSNCAALTRVD 906

Query: 644 LPELPCNLGLLSARNCTSLEKLPAGL-SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
           L   P  + ++   N +  E+  + L  S    + +N  +   LDP    E V D     
Sbjct: 907 LSGYPSLMEMMEVDNIS--EEASSSLPDSCVHKVDLNFMDCFNLDP----ETVLD----- 955

Query: 703 SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA----TLKTRPPRP 743
              ++  I   M F G E+P +F ++++G S+     L   P +P
Sbjct: 956 ---QQSNIFNLMVFSGEEVPSYFTYRTIGISSLTIPLLNVPPSQP 997



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 46/280 (16%)

Query: 500 MVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTF 559
           M ++LE + F     L      ++ LN    KL+ L M   K   +      LP+     
Sbjct: 650 MATNLETLCFRNCESLVELSSSIRNLN----KLLRLDMGMCKTLTI------LPTGF-NL 698

Query: 560 KTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLER 619
           K+     +  C  L   P+   N+  L + GT I E P +L  L  +  L +S  +N  +
Sbjct: 699 KSLDHLNLGSCSELRTFPELSTNVSDLYLFGTNIEEFPSNL-HLKNLVSLTISKKNNDGK 757

Query: 620 IPESIRHLS--------KLTFLFISHCERLQTLPELPCNLGL---LSARNCTSLEKLPAG 668
             E ++  +         LT L++     L  LP    NL     L+ RNC +L+ LP G
Sbjct: 758 QWEGVKPFTPFMAMLSPTLTHLWLDSIPSLVELPSSFQNLNQLKKLTIRNCRNLKTLPTG 817

Query: 669 LSSMS-SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
           ++ +S   L  N C  L+  P   + I++         EE  I+        E+P W   
Sbjct: 818 INLLSLDDLDFNGCQQLRSFPEISTNILR------LELEETAIE--------EVPWWIEK 863

Query: 728 QS------MGSSATLKTRPPRPAGYNKL--ISFAFCAVVV 759
            S      MG  + LK      +    L  +SF+ CA + 
Sbjct: 864 FSNLTRLIMGDCSRLKCVSLNISKLKHLGEVSFSNCAALT 903


>gi|227438163|gb|ACP30571.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 234/741 (31%), Positives = 367/741 (49%), Gaps = 96/741 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SFRGED R +F SH+      K I  FID+++ RG++I   L+  I  S IAII+
Sbjct: 60  HDVFPSFRGEDVRRDFFSHIQREFERKGITPFIDNEIKRGESIGPELIRAIRGSKIAIIL 119

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS+W                      F++VDPS V+K +  FG+ F +    + 
Sbjct: 120 LSRNYASSKWCLDELVEIMKCREEFGQTVMAIFHKVDPSDVKKLTGDFGKFFKKTCAGKA 179

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            + ++RW+ AL + A ++G+ S+    E+ +I++IA D    L+    S +  GLVG+  
Sbjct: 180 KDCIERWRQALAKVATIAGYHSSNWDNEADMIKKIATDTSNMLNNFTPSNDFDGLVGMGA 239

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF-----ALNVRE 213
             E ++S+LC+GS+ V  + IWG  GI K TIA   FN++S  F+ S F     A + R 
Sbjct: 240 HWENLKSILCLGSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANSSRL 299

Query: 214 AEETGGIK-DLQKKLLSELS--KDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
             +   +K  LQ++ +S+++  KD  + +     NRL  KKV +V D V           
Sbjct: 300 CSDDYSVKLQLQQQFMSQITDHKDMVVSHFGVVSNRLRDKKVLVVLDGVNRSVQLDAMAK 359

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT+D+++ +    N  Y +      +A ++FC + FG +       E
Sbjct: 360 ETWWFGPGSRIIITTQDQKLFRAHGINHIYEVNLPTNDEALQIFCTYCFGQNFPKYGFEE 419

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +    +  +PL L+V+G YL G SKE W +++ +L      +I+ +LK SYD+LDD 
Sbjct: 420 LAREVTSLSGELPLGLRVMGSYLRGMSKEDWTNSLPRLRDSLDTDIQSILKFSYDALDDE 479

Query: 375 QKNVFLDIACFLEGE-----------------HRDEVISIFDASKSLINLDLFYRIRMHD 417
            K++FL IACF   E                  R +V+    A KSLI++D   RIRMH 
Sbjct: 480 DKDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVL----AEKSLISID-SGRIRMHS 534

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHM 476
           LL  +GREIV K+SI+ PG+R  L+  +DI +VL    TG++++ GI  +  ++  EI +
Sbjct: 535 LLEKLGREIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEIDI 594

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLK 536
           +  AF  M  L+FL+  G  +   ++ +  +  +   ++          N    + + L+
Sbjct: 595 SEKAFEGMSNLQFLKVCGFTDALQITGVSQICXSSXSYVG---------NATNLEYLDLR 645

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTI 593
                VE        LP SL   K      +  C  LE LP  + NLEYL    + G + 
Sbjct: 646 NCLNMVE--------LPLSLRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNELDIAGCSS 696

Query: 594 RELPE--SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            +L +  ++G    ++ L +S+   L  +P  I + + L  L +S C +L  LP    NL
Sbjct: 697 LDLGDFSTIGNAVNLRELNISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGNL 756

Query: 652 G---LLSARNCTSLEKLPAGL 669
                L    C  LE LP  +
Sbjct: 757 QKLRWLRLEGCIRLEVLPTNI 777



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 40/213 (18%)

Query: 569 DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILS---------------- 612
           DC ML+  P    NLE L ++GT I ++P S+     +K L +S                
Sbjct: 789 DCSMLKSFPQISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMSYFENLKEFPHALERIT 848

Query: 613 ----NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
                ++ ++ +P  ++ +S+L   F+S C +L  LP +  +   + A +C SLE L   
Sbjct: 849 SLSLTDTEIQEVPPLVKQISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLEILECS 908

Query: 669 LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ 728
            S    +  +   N  KL+  E  +++     +H++            PG ++P +F H+
Sbjct: 909 FS--DQIRRLTFANCFKLN-QEARDLIIQASSEHAV-----------LPGGQVPPYFTHR 954

Query: 729 SMGSSA-TLK-TRPPRPAGYNKLISFAFCAVVV 759
           + G    T+K  + P P      ++F  C +++
Sbjct: 955 ATGGGPLTIKLNQNPLPES----MTFKACILLL 983


>gi|6692110|gb|AAF24575.1|AC007764_17 F22C12.17 [Arabidopsis thaliana]
          Length = 1195

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 271/918 (29%), Positives = 424/918 (46%), Gaps = 175/918 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            Y VF SF G D R +F SH     +   I  F D +++RG+ IS +L   I  S I+I++
Sbjct: 212  YRVFTSFHGSDVRTSFLSHFRKQFNNNGITMFDDQRILRGETISPALTQAIRESRISIVL 271

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
             S+ YASS W                      FY VDPS VRKQ+  FG  F+     R 
Sbjct: 272  LSKNYASSGWCLDELLEILKCKDDMGQIVMTVFYGVDPSDVRKQTGEFGIAFNETCACRT 331

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             E+ ++W  AL    +++G        E+K+IE+IA DV ++L+ T      G+VG+E  
Sbjct: 332  EEERQKWSQALNYVGNIAGEHLLNWDNEAKMIEKIARDVSEKLNVTPCRDFDGMVGIEAH 391

Query: 160  IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
            + +I+SLL + ++ V  + I G  GI K TI  A+ + +S  F  + F  N+R +   G 
Sbjct: 392  LRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRGSHPIGL 451

Query: 219  ---GIK-DLQKKLLSE-LSKDGN-MRNIESQLNRLARKKVRIVFDDVTS----------- 261
               G+K  LQ++LLS+ L++DG+ + ++ +   RL   KV I+ DDV             
Sbjct: 452  DEYGLKLRLQEQLLSKILNQDGSRICHLGAIKERLCDMKVFIILDDVNDVKQLEALANES 511

Query: 262  -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                 GSR+I+TT +K++LK    N  Y +      +A K+ C++AF          +LT
Sbjct: 512  NWFGPGSRIIVTTENKELLKQHGINNTYYVGFPSDEEAIKILCRYAFRQSSSRHGFKKLT 571

Query: 317  DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
                +    +PL L+V+G  L G+++E WE  +R+LE I   +IE+VL++ Y+SL ++++
Sbjct: 572  RSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIIDRDIEQVLRVGYESLHENEQ 631

Query: 377  NVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMG 423
            ++FL IA F   E  D V ++                +KSLI +    RIRMH LL+ +G
Sbjct: 632  SLFLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRMHKLLQLVG 691

Query: 424  REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
            R+  ++E    P KR  L   ++I  VL+ + GT A+ GI  D + +N E+ +++ A  +
Sbjct: 692  RQANQRE---EPWKRRILIDAQEICHVLENDIGTGAVSGILFDTSGIN-EVSISNKALRR 747

Query: 484  MPKLRFLRFYGDK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKM 537
            M  LRFL  Y  K    N+  +      P   +R L W   P K L +   AE LV L M
Sbjct: 748  MCNLRFLSVYKTKHDGYNRMDIPEDMEFP-PRLRLLHWDAYPSKCLPLKFRAENLVELDM 806

Query: 538  PCTKVEQLWDDVQRLP-------------SSLCTFKTPITFEIID---CKMLERLPDELE 581
              +++E LW   Q L                L         E++D   C  L  LP  ++
Sbjct: 807  KDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLDLSVCLALAELPSSIK 866

Query: 582  NLEYLTV-----------------------------------------------KGTTIR 594
            NL  L V                                                 T + 
Sbjct: 867  NLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKIKRLYLVRTGVE 926

Query: 595  ELPESLGRLSWVKRLILSNNSNLERI---PES------------------IRHLSKLTFL 633
            E+P S+   S + ++ LS + NL+ I   P S                  I+ L +L  L
Sbjct: 927  EVPASITHCSRLLKIDLSGSRNLKSITHLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHL 986

Query: 634  FISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
             +  C +L++LPELP +L LL+A +C SLE++   L++ +  L  N  N LKL       
Sbjct: 987  RLCRCRKLKSLPELPASLRLLTAEDCESLERVTYPLNTPTGQL--NFTNCLKLGEEAQRV 1044

Query: 694  IVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
            I++   +KH+            FPG+ +P  F H++ G+S  +  +           SFA
Sbjct: 1045 IIQQSLVKHAC-----------FPGSVMPSEFNHRARGNSLKILVKSS--------ASFA 1085

Query: 754  FCA-VVVFPAFLKYFRHK 770
            F A V++ P  L+  R++
Sbjct: 1086 FKACVLISPRQLQCERNQ 1103


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 243/780 (31%), Positives = 395/780 (50%), Gaps = 107/780 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
           ++DVFLSFRG DTR+N T+ L+  L  + I  F  DD+L RG  I+ +L  +I  S   I
Sbjct: 20  IFDVFLSFRGVDTRNNITNLLYEALRRQGIIVFRDDDELERGKAIANTLTNSIRQSRCTI 79

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF----SR 94
           +I S+RYA S+W                      FY++ PS V   +  F + F    + 
Sbjct: 80  VILSKRYADSKWCLRELVEIVKCKNSFNQIVLVVFYKIKPSDVNSPTGIFEKFFVDFEND 139

Query: 95  LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           +++ F E+++ W+NA+     L+ +  N  + E++ +++I       L     S ++ LV
Sbjct: 140 VKENF-EEVQDWRNAMEVVGGLTPWVVNE-QTETEEVQKIVKHAFDLLRPDLLSHDENLV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+   ++++  L+ IG +    + IWG+GG+ K TIA AVF  ++R F GS    NV++ 
Sbjct: 198 GMNLRLKKMNMLMGIGLDDKRFIGIWGMGGVGKTTIAKAVFKSVAREFHGSCILENVKKT 257

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR-----NIESQLNRLARKKVRIVFDDVT-------- 260
            +   G+  LQ+KLLS+    G ++      +E     L  +KV +V DDV         
Sbjct: 258 LKNVRGLVSLQEKLLSDTLMRGKVQIKDGEGVEMIKKNLGNRKVFVVLDDVDHFSQVKDL 317

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRD+ +L +   + +Y ++     +A +LFC  AFG       +
Sbjct: 318 AGGEEWFGCGSRIIITTRDEGLLLSLGIDIRYNVESFGDEEALQLFCHEAFGVKFPKKGY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L    ++YA+G+PLA+K LG  L  R  + WE A+RKL    + ++ E LKISYD+L 
Sbjct: 378 LDLCMPFVEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKLNNSLNRQVYENLKISYDALG 437

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIF----------------------------DASKSL 404
             ++ +FL IACFL+G+ +D VI  F                            DA K L
Sbjct: 438 KEERRIFLYIACFLKGQSKDLVIDTFVSFEIDAADGLLTRKKAADVLCIKETAADALKKL 497

Query: 405 INLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI 460
               L      +I+MH+L + +G+EI R+ES     K +RLWH +D+   L+   G EAI
Sbjct: 498 QEKSLITVVNDKIQMHNLHQKLGQEIFREES---SRKSSRLWHREDMNHALRHKQGVEAI 554

Query: 461 EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC 520
           E I+LD N+ + E H+N+  FS M  L+ LR +   N  +   LE +  +++R L W   
Sbjct: 555 ETIALDSNE-HGESHLNTKFFSAMTGLKVLRVH---NVFLSGDLEYLS-SKLRLLSWHGY 609

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
           P + L  +    +L+ L +  + +E  W + ++L       K  +   + + K L + PD
Sbjct: 610 PFRNLPSDFQPNELLELNLQNSCIENFWRETEKLD------KLKV-INLSNSKFLLKTPD 662

Query: 579 --ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
              + NLE L + G   ++EL  S+G L  +  L L +  +L+ I  +I  L  L  L +
Sbjct: 663 LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNI-SLESLKILIL 721

Query: 636 SHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
           S C RL+  PE+  N+ LL+    + T++ KL A +  ++S++ ++L  C  L   PN +
Sbjct: 722 SGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAI 781



 Score = 43.1 bits (100), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++P+ L  LS +  L LS N     +P S+  L  L  L + +C RL++LP+ P +L  +
Sbjct: 893 DIPDDLSCLSSLHFLDLSRNL-FTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYV 951

Query: 655 SARNCTSLEK 664
            AR+C SL++
Sbjct: 952 LARDCVSLKE 961


>gi|356514970|ref|XP_003526174.1| PREDICTED: TMV resistance protein N [Glycine max]
          Length = 1113

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 244/803 (30%), Positives = 397/803 (49%), Gaps = 136/803 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+NFT+ L   L    I  F DD  L +G++I+  LL  I+ S + ++
Sbjct: 23  YDVFVSFRGEDTRNNFTAFLFDALFENGIHAFKDDTHLQKGESIAPELLLAIQESRLFLV 82

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASS W                       FY VDPS VRKQS  +G  F+   +R
Sbjct: 83  VFSKNYASSTWCLRELAHICNCTIEPSSSRVLPIFYDVDPSEVRKQSGYYGIAFAEHERR 142

Query: 99  FPE------KMKRWKNALTEAADLSGFDSNVIRPESK--LIEEIANDVLKRLDATFQS-K 149
           F E      +++RW+ AL + A++SG+D   I+ ES+  +I+EI   +  RL + FQ+  
Sbjct: 143 FREDIEKMEEVQRWREALIQVANISGWD---IQNESQPAMIKEIVQKIKCRLGSKFQNLP 199

Query: 150 NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGI---GGISKITIAGAVFNKISRHFEGSY 206
           N  LVG+E  ++E+E   C+  E V  +R+ GI   GGI K T+A A++ KI+  F+   
Sbjct: 200 NGNLVGMESRVKELEK--CLKLESVSDVRVVGISGMGGIGKTTLASALYEKIAYQFDFHC 257

Query: 207 FALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVT 260
           F  +V       G   +QK+LLS+   D N+    + +       RL  K+  IVFD+V 
Sbjct: 258 FVDDVNYIYRRSGSLGVQKQLLSQCLNDKNLEICNASVGTYLIGTRLRNKRGLIVFDNVN 317

Query: 261 S---------------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
                                 GSR+II +RD+ +L+    +  Y ++ L   +A +LFC
Sbjct: 318 QVEQLRMFTGSRETLLLECLGGGSRIIIISRDEHILRTHGVHHVYEVQPLEDDNAVQLFC 377

Query: 300 QWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE 359
           + AF  D++ + +  LT   + +A G PLA++V+G  L GR+   W   + +L      +
Sbjct: 378 KNAFKCDYIMSDYKMLTYDVLSHADGHPLAIEVIGKSLHGRNVSQWRGILVRLSDNKSKD 437

Query: 360 IEEVLKISYDSLDDSQKNVFLDIACFLEG---EHRDEVISIFDASKSLINLDLFY----- 411
           I +VL+ISYD L+++ + +FLDIACF +    EH +E I  F      I L +       
Sbjct: 438 IMDVLRISYDDLEENDREIFLDIACFFDQDYFEHCEEEILDFRGFNPEIGLQILVDKSLI 497

Query: 412 -----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
                RI MH LLRD+G+ IVR++S   P K +RLW  +D+Y+V+  N   + +E I +D
Sbjct: 498 TIFDGRIYMHSLLRDLGKCIVREKSPKEPRKWSRLWECEDLYKVMSNNMEAKNLEAIVVD 557

Query: 467 ---------MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA------- 510
                    + +V+    M +    K+P+  +   YGD+ + + ++ +   F+       
Sbjct: 558 DKSWMFFNTIMRVDALSKMKNLKLLKLPE--YDSLYGDEEEELCTYTKKDFFSGNLNYLS 615

Query: 511 -EVRHLEWPQCPLKTLNICAE--KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEI 567
            E+ +L W   P  +L  C +   L  L +  + ++ LWD  Q +P+     +  +++  
Sbjct: 616 NELGYLIWQCYPFNSLPQCFQPHNLFELDLSWSSIQHLWDSTQPIPN---LRRLNVSY-- 670

Query: 568 IDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE-- 622
             CK L  +P+  E  NL +L ++G   +R++  S+G L  +  L L +  +L  +P   
Sbjct: 671 --CKYLIEVPNFGEALNLYWLNLEGCVQLRQIHPSIGHLRKLTALNLKDCKSLVNLPHFV 728

Query: 623 ---------------------SIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNC 659
                                SI  L KLT L ++ C+ L  LP    +L L  L+ + C
Sbjct: 729 EELNLEELNLKGCEELRQIDPSIGRLRKLTALNLTDCKSLVNLPHFVEDLNLQELNLKGC 788

Query: 660 TSLEKLPAGLSSMSSVLYVNLCN 682
             L ++ + +  +  +  +NL +
Sbjct: 789 VQLRQIHSSIGHLRKLTALNLID 811



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 40/244 (16%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE--NLEYLTVKG-TTIRELPESLGRL 603
           ++++++  S+   +      + DCK L  LP  +E  NL+ L +KG   +R++  S+G L
Sbjct: 742 EELRQIDPSIGRLRKLTALNLTDCKSLVNLPHFVEDLNLQELNLKGCVQLRQIHSSIGHL 801

Query: 604 SWVKRLILSNNSNLERIPESIRHLS------------------KLTFLFISHCERLQTLP 645
             +  L L +  +L  +P  +  L+                  KL  L + HC+RL+ LP
Sbjct: 802 RKLTALNLIDCKSLVNLPHFVEDLNLEELNLKGCEELSLKELSKLLHLNLQHCKRLRYLP 861

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH--- 702
           ELP       +      E+   GL         N+ N  +L   +        WM     
Sbjct: 862 ELPSRTDWPGSWTPVKHEEYGLGL---------NIFNCPELVERDCCTNNCFSWMIQILQ 912

Query: 703 --SLYEERGIKK----SMYFPGNEIPKWFRHQSMGSSATLKT-RPPRPAGYNKLISFAFC 755
             SL    G+      S   PG+EIP+WF+ + +G+   +   R      Y   I  A  
Sbjct: 913 CLSLSGFSGLFSFPLFSSIIPGSEIPRWFKKEHVGTGNVINIDRSHFTQHYKNRIGIALG 972

Query: 756 AVVV 759
            + V
Sbjct: 973 VIFV 976


>gi|297791059|ref|XP_002863414.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309249|gb|EFH39673.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1170

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 246/759 (32%), Positives = 373/759 (49%), Gaps = 101/759 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG D R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGGDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPS VR Q   FG  F +  +R  E+
Sbjct: 71  LFSKNYASSSWCLNELLEIVNCNDKIVIPVFYGVDPSQVRHQIGDFGSIFEKTCRRHSEE 130

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K +WK ALT+ A++ GFDS     E+K+IEEIAND+L +L  T     +  VG+E  I 
Sbjct: 131 VKNQWKKALTDVANMLGFDSATWDDEAKMIEEIANDILGKLLLTTPKDFENFVGIEDHIA 190

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREAEETG 218
            +  LL + SE V  + IWG  GI K TIA A+FN++SR+F+ S F   A   +  E   
Sbjct: 191 NMSGLLQLESEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQVSKFIDRAFVYKSREIYS 250

Query: 219 GIK--------DLQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
           G          +LQ+  LSE+ +  D  + ++     RL  +KV I+ DD+         
Sbjct: 251 GANPDDHNMKLNLQESFLSEILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVILDSL 310

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+I+ T +K  L+    +  Y +       A  + CQ AF         
Sbjct: 311 VGQTQWFGSGSRIIVVTNNKHFLRAHGIDHIYELSLPTEEHAVAMLCQSAFRKKSPPEGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L  +  ++A  +PL L VLG  L GR KE W   + +L+     +IE++L+ISYD L 
Sbjct: 371 EMLVVQVARHAGSLPLGLNVLGSCLRGRDKEYWVDMLPRLQNSLDDKIEKILRISYDGLG 430

Query: 373 DSQ-KNVFLDIACFLEGEHRDEVISIFDASKSLINLDL------------FYRIRMHDLL 419
            ++ + +F  IAC         + S+   SK  +N+ L            +  + MH LL
Sbjct: 431 SAEDQAIFRHIACIFNHMDVTTIKSLLADSKLGVNVGLQNLVDKSLIHVRWGHVEMHRLL 490

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MG+ IVR +SI+  GKR  L    DI  VL +   T  + GISL+ +K++ ++ ++  
Sbjct: 491 QEMGQNIVRTQSIDKLGKREFLVDPNDICDVLSEGIDTRKVLGISLETSKID-QLCVHKS 549

Query: 480 AFSKMPKLRFLR----FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           AF  M  LRFL+     +G++N+  +          ++ L W + P++ +  N   E LV
Sbjct: 550 AFKGMRNLRFLKIGTDIFGEENRLDLPESFNYLPPTLKLLCWSEFPMRCMPSNFRPENLV 609

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT- 592
            LKMP +K+ +LWD V            P+T     C            L+ + + G+  
Sbjct: 610 KLKMPNSKLHKLWDGV-----------VPLT-----C------------LKEMDLDGSVN 641

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCN 650
           ++E+P+ L   + ++ L L N  +L  +P  IR+L+KL  L +  C  L+TLP      +
Sbjct: 642 LKEIPD-LSMATNLETLELGNCKSLVELPSFIRNLNKLLKLNMEFCNNLKTLPTGFNLKS 700

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
           LGLL+ R C+ L   P  +S+  S LY+   N  +L  N
Sbjct: 701 LGLLNFRYCSELRTFPE-ISTNISDLYLTGTNIEELPSN 738



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 21/201 (10%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKR 608
           LPSS        + +I +C+ LE LP    L++L  L+ KG + +R  PE    +S +  
Sbjct: 790 LPSSFQNLNNLESLDITNCRNLETLPTGINLQSLYSLSFKGCSRLRSFPEISTNISSLNL 849

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---ELPCNLGLLSARNCTSLEKL 665
               + + +E +P  I + S L  L +  C RL+ +        +LG +  ++C  L ++
Sbjct: 850 ----DETGIEEVPWWIENFSNLGLLSMDRCSRLKCVSLHISKLKHLGKVDFKDCGELTRV 905

Query: 666 -----PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE 720
                P+G+  M +V  ++  + +KLD  +   +  +      L++E  + K M  PG +
Sbjct: 906 DLSGYPSGMEEMEAV-KIDAVSKVKLDFRDCFNLDPET----VLHQESIVFKYMLLPGEQ 960

Query: 721 IPKWFRHQSMG-SSATLKTRP 740
           +P +F +++ G SS T+   P
Sbjct: 961 VPSYFTYRTTGVSSLTIPLLP 981


>gi|357499359|ref|XP_003619968.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494983|gb|AES76186.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1401

 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 243/741 (32%), Positives = 380/741 (51%), Gaps = 95/741 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD  L RG  I+ SL+  IE S I I 
Sbjct: 16  YQVFLSFRGSDTRYGFTGNLYKALTNKGIHTFIDDNHLPRGSEITPSLIKAIEESRIFIP 75

Query: 61  IFSERYASSRWFF---YRVDPSHVRKQSHSF---GRHFSRLRKRFP------EKMKRWKN 108
           IFS  YASS +       +  +  R++  SF   G   +   KRF       E+++RWK 
Sbjct: 76  IFSTNYASSSFCLDELVHMSFTATRQRVASFCSYGEALADHEKRFQNDKDNMERLQRWKM 135

Query: 109 ALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLC 168
           A+ + A+LSG+  + +  E + I +I  D+  +++       K  VG++  +++++ LL 
Sbjct: 136 AMRQVANLSGYHFS-LGYEYEFIGKIVEDISDKINRVVLHVAKYPVGLQYRVQQLKLLLD 194

Query: 169 IGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKL 227
             S EGV  + I+G GG+ K T+A A++N ++  FE   F   VRE      +K LQ++L
Sbjct: 195 KESNEGVHMVGIYGTGGLGKSTLAKAIYNYVADQFECVCFLHKVRENSTHNNLKHLQEEL 254

Query: 228 LSELSK-DGNMRNIESQL----NRLARKKVRIVFDDVTS----------------GSRVI 266
           L +  K +  + ++   +     RL RKK+ ++ DDV                  GSRVI
Sbjct: 255 LLKTIKLNIKLGDVSEGIPLIKERLHRKKILLILDDVDKMEQLEALAGGLDWFGRGSRVI 314

Query: 267 ITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGV 326
           ITTRDK +L     ++ Y ++ +   +A +L  +W    D +   + E+ ++A+ YA G+
Sbjct: 315 ITTRDKHLLTCHRVDRTYEVEGIYGKEAFELL-RWLAFKDKVPLGYEEILNRAVSYASGL 373

Query: 327 PLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFL 386
           PL ++++G  L G+S E W+S +   E IP+ +I+E+LK+SYD+L++ +++VFLDIAC  
Sbjct: 374 PLVIEIVGSNLFGKSIETWKSTLDGYEKIPNTKIQEILKVSYDALEEEEQSVFLDIACCF 433

Query: 387 EGEHRDEVISIFDA--------------SKSLINLDLFYR-------IRMHDLLRDMGRE 425
           +G    EV  I  A               KSL+ ++  YR       + +HDL+ DMG+E
Sbjct: 434 KGCKWTEVEDILHAHYGHCIKHHVGVLVEKSLLKINTQYRSARNHVDVTLHDLVEDMGKE 493

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           IVR+ES   PG+R+RLW H DI  VL+KNTGT  IE I L+   +   I  N  +F KM 
Sbjct: 494 IVRQESSKEPGERSRLWCHDDIVHVLQKNTGTSNIEMIYLNCPAMEPVIDCNGKSFKKMT 553

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQL 545
           KL+ L     +N       + +P + +R  +W  C   T    +  + S K    KV   
Sbjct: 554 KLKTLII---ENGHFSKGPKYLPNS-LRVFKWKGC---TSESLSSSIFSKKFDFMKV--- 603

Query: 546 WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGR 602
                            +TF+  +C+ L  +P+   L NLE  +V K   +  + +S+G+
Sbjct: 604 -----------------LTFD--NCEYLTHVPNVSGLLNLEKFSVEKSNNLITIHDSIGK 644

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNC 659
           L+ ++ L       LE  P     L  L    +S+C  L+  PEL C   NL  ++  N 
Sbjct: 645 LNKLEILNAKKCIKLESFPP--LQLPSLKEFELSYCRSLKKFPELLCKMTNLKEIALHNN 702

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
           TS+  LP    ++S + +V +
Sbjct: 703 TSIGGLPFSFENLSELRHVTI 723


>gi|42562922|ref|NP_176590.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196067|gb|AEE34188.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 997

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 271/918 (29%), Positives = 424/918 (46%), Gaps = 175/918 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R +F SH     +   I  F D +++RG+ IS +L   I  S I+I++
Sbjct: 14  YRVFTSFHGSDVRTSFLSHFRKQFNNNGITMFDDQRILRGETISPALTQAIRESRISIVL 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDPS VRKQ+  FG  F+     R 
Sbjct: 74  LSKNYASSGWCLDELLEILKCKDDMGQIVMTVFYGVDPSDVRKQTGEFGIAFNETCACRT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  AL    +++G        E+K+IE+IA DV ++L+ T      G+VG+E  
Sbjct: 134 EEERQKWSQALNYVGNIAGEHLLNWDNEAKMIEKIARDVSEKLNVTPCRDFDGMVGIEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + +I+SLL + ++ V  + I G  GI K TI  A+ + +S  F  + F  N+R +   G 
Sbjct: 194 LRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRGSHPIGL 253

Query: 219 ---GIK-DLQKKLLSE-LSKDGN-MRNIESQLNRLARKKVRIVFDDVTS----------- 261
              G+K  LQ++LLS+ L++DG+ + ++ +   RL   KV I+ DDV             
Sbjct: 254 DEYGLKLRLQEQLLSKILNQDGSRICHLGAIKERLCDMKVFIILDDVNDVKQLEALANES 313

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+I+TT +K++LK    N  Y +      +A K+ C++AF          +LT
Sbjct: 314 NWFGPGSRIIVTTENKELLKQHGINNTYYVGFPSDEEAIKILCRYAFRQSSSRHGFKKLT 373

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
               +    +PL L+V+G  L G+++E WE  +R+LE I   +IE+VL++ Y+SL ++++
Sbjct: 374 RSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIIDRDIEQVLRVGYESLHENEQ 433

Query: 377 NVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMG 423
           ++FL IA F   E  D V ++                +KSLI +    RIRMH LL+ +G
Sbjct: 434 SLFLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRMHKLLQLVG 493

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           R+  ++E    P KR  L   ++I  VL+ + GT A+ GI  D + +N E+ +++ A  +
Sbjct: 494 RQANQRE---EPWKRRILIDAQEICHVLENDIGTGAVSGILFDTSGIN-EVSISNKALRR 549

Query: 484 MPKLRFLRFYGDK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKM 537
           M  LRFL  Y  K    N+  +      P   +R L W   P K L +   AE LV L M
Sbjct: 550 MCNLRFLSVYKTKHDGYNRMDIPEDMEFP-PRLRLLHWDAYPSKCLPLKFRAENLVELDM 608

Query: 538 PCTKVEQLWDDVQRLP-------------SSLCTFKTPITFEIID---CKMLERLPDELE 581
             +++E LW   Q L                L         E++D   C  L  LP  ++
Sbjct: 609 KDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLDLSVCLALAELPSSIK 668

Query: 582 NLEYLTV-----------------------------------------------KGTTIR 594
           NL  L V                                                 T + 
Sbjct: 669 NLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKIKRLYLVRTGVE 728

Query: 595 ELPESLGRLSWVKRLILSNNSNLERI---PES------------------IRHLSKLTFL 633
           E+P S+   S + ++ LS + NL+ I   P S                  I+ L +L  L
Sbjct: 729 EVPASITHCSRLLKIDLSGSRNLKSITHLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHL 788

Query: 634 FISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
            +  C +L++LPELP +L LL+A +C SLE++   L++ +  L  N  N LKL       
Sbjct: 789 RLCRCRKLKSLPELPASLRLLTAEDCESLERVTYPLNTPTGQL--NFTNCLKLGEEAQRV 846

Query: 694 IVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
           I++   +KH+            FPG+ +P  F H++ G+S  +  +           SFA
Sbjct: 847 IIQQSLVKHAC-----------FPGSVMPSEFNHRARGNSLKILVKSS--------ASFA 887

Query: 754 FCA-VVVFPAFLKYFRHK 770
           F A V++ P  L+  R++
Sbjct: 888 FKACVLISPRQLQCERNQ 905


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 244/765 (31%), Positives = 387/765 (50%), Gaps = 118/765 (15%)

Query: 28  KSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW--------------- 71
           + I  ++DD +L RG  I  +L   IE S I+++IFS  YASS W               
Sbjct: 73  RGIDVYMDDRELERGKAIEPALWKAIEESRISVVIFSRDYASSPWCLDELVKIVQCMKEM 132

Query: 72  ------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR---WKNALTEAADLSGFDSN 122
                  FY VDPS V ++   + + F    + F E M++   WK+ L+  A+LSG+D  
Sbjct: 133 GHTVLPVFYDVDPSDVAERKRKYEKAFVEHEQNFKENMEKVRNWKDCLSTVANLSGWDVR 192

Query: 123 VIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLC--IGSEGVCKLRIW 180
             R ES+ I  IA  +  +L  T  + +K LVG++  +E +   +   +G E    +   
Sbjct: 193 H-RNESESIRIIAEYISYKLSVTLPTISKKLVGIDSRLEVLNGYIGEEVGKEIFIGICG- 250

Query: 181 GIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKD----- 234
            +GGI K T+A  ++++I   FEGS F  N+RE   +  G + LQ++LLSE+  +     
Sbjct: 251 -MGGIGKTTVARVLYDRIRWQFEGSCFLENIREDFAKKDGPRRLQEQLLSEILMERASVW 309

Query: 235 GNMRNIE-------------SQLNRLARKKVRIVFDD---VTSGSRVIITTRDKQVLKNC 278
            + R IE                +   +++++ + ++      GSR+IIT+RDKQVL   
Sbjct: 310 DSYRGIEMIKRRLRLKKILLLLDDVDDKEQLKFLAEEPGWFGPGSRIIITSRDKQVLTRN 369

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
             ++ Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLAL+V+G ++ 
Sbjct: 370 GVDRIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMH 429

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
           GRS   W SA+ ++  I   EI +VL+IS+D L + +K +FLDIACFL+G  +D +I I 
Sbjct: 430 GRSILEWRSAINRIYDILDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRIL 489

Query: 399 DA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHK 445
           D+              KSLI++    R+ MH+LL+ MG+EIVR E    PGKR+RLW +K
Sbjct: 490 DSCGFHAHIGTQVLIEKSLISVSR-DRVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYK 548

Query: 446 DIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLE 505
           D++  L  NTG E IE I LDM  + +E   N  AFSKM +LR L+     +   +S   
Sbjct: 549 DVFLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSRLRLLKI----DNVQLSEGP 603

Query: 506 GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI 563
                E+R +EW   P K+L   +  ++LV L M  + +EQLW          C  K+ +
Sbjct: 604 EDLSNELRFIEWHSYPSKSLPSGLQVDELVELHMANSSLEQLW----------CGCKSAV 653

Query: 564 TFEIIDCK---MLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
             +II+      L + PD   + NLE L ++G T++ E+  SL     ++ + L N  ++
Sbjct: 654 NLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSI 713

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCN--------------------------L 651
             +P ++  +  L    +  C +L+  P++  N                          L
Sbjct: 714 RILPNNL-EMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGL 772

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           GLLS  +C +LE +P+ +  + S+  ++L  C+ LK  P +L E+
Sbjct: 773 GLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEV 817



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 132/326 (40%), Gaps = 83/326 (25%)

Query: 434 HPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL-RFLRF 492
           HP     L HHK +  V   N  +  I   +L+M        +N +      KL +F   
Sbjct: 693 HPS----LAHHKKLQYVNLVNCKSIRILPNNLEMES------LNVFTLDGCSKLEKFPDI 742

Query: 493 YGDKNKCMVSHLEGVPF----AEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDD 548
            G+ N+ MV  L+        + + HL      L ++N C                   +
Sbjct: 743 VGNMNELMVLRLDETGITKLSSSIHHL--IGLGLLSMNSCK------------------N 782

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ +PSS+   K+    ++  C  L+ +P+   E+E+L+     GT+IR+LP S+     
Sbjct: 783 LESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASI----- 837

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLE 663
               IL N                L  L +  C+R+  LP L   C+L +L  R C   E
Sbjct: 838 ---FILKN----------------LKVLSLDGCKRIVVLPSLSGLCSLEVLGLRACNLRE 878

Query: 664 -KLPA--GLSSMSSVLYVNLCNFLKLDP--NELSE----IVKDGWMKHSLYE-----ERG 709
             LP   G  S    L ++  NF+ L    N+L E    +++D  M  SL E     + G
Sbjct: 879 GALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQTG 938

Query: 710 IKK-----SMYFPGNEIPKWFRHQSM 730
           +       S+  PGNEI  WF HQ +
Sbjct: 939 LSNPRPGFSIAVPGNEILGWFNHQKL 964


>gi|297848176|ref|XP_002891969.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337811|gb|EFH68228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 262/880 (29%), Positives = 402/880 (45%), Gaps = 163/880 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL +  +   I  F D+ + R +NI  +L+  I  S I+II+
Sbjct: 13  YNVFTSFHGPDVRKTFLSHLRNQFNQNGITMFDDNGIPRSENIPSALIQGIRESRISIIV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASSRW                      FY VDPS VR Q+  FG  F++   ++ 
Sbjct: 73  LSKMYASSRWCLDELLEILKCKEDVGKIVMTVFYGVDPSDVRNQTGDFGIAFNKTCARKT 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E  ++W  AL    +++G   +    E+++I +IA DV  RL+AT      G+VG+E  
Sbjct: 133 KEHGRKWSEALDYVGNIAG--EHNWGNEAEMIAKIARDVSDRLNATLSRDFDGMVGLETH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + E+ESLL     GV  + + G  GI K TIA A+ + +S  F+ + F  N+ E  + G 
Sbjct: 191 LREMESLLNFDYVGVKIVGLAGPAGIGKSTIARALCSGLSNRFQRTCFMDNLMENCKIGL 250

Query: 219 ---GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----------- 261
               +K  LQ++LLS++     +R  ++     RL  K++ I+ DDV +           
Sbjct: 251 GEYSLKLHLQEQLLSKVLNLNGIRISHLRVIQERLHDKRILIILDDVENLVQLEALANIS 310

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVI+TT +K++L+    N  Y++     ++A  +FC  AF         ++LT 
Sbjct: 311 WFGPGSRVIVTTENKEILQQHGINDIYQVGFPSESEALTIFCLSAFRQTSPPDGFMKLTC 370

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + +K    +PL L VLG  L G+S+  W   + +L+I     IE VLK+ Y+SL +  + 
Sbjct: 371 EVVKICGNLPLGLHVLGSSLRGKSQADWIDELPRLKICLDGRIESVLKVGYESLHEKDQV 430

Query: 378 VFLDIACFLEGEHRDEVISI-----FDASKSLINLDLFYRIR-------MHDLLRDMGRE 425
           +FL IA FL   H D V S+      D S  L NL   Y I+       MH LL+ M  +
Sbjct: 431 IFLLIAIFLNYAHVDHVTSVLAKTNLDVSLGLKNLAKKYLIQRESSIVVMHHLLQVMATQ 490

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
           ++ K+      KR  L    +I  VL+   G  +I G+S D+ ++N E+ +++ AF+KM 
Sbjct: 491 VISKQ---ERSKRQILVDANEICFVLEMAEGNGSIIGVSFDVAEIN-ELRISATAFAKMC 546

Query: 486 KLRFLRFYGDKN--KCMVSHLEGVPFA-EVRHLEWPQCPLKTLNI--CAEKLVSLKMPCT 540
            L FL+ Y  K+  K  +     + F   ++ L W   P K+L I  C E LV   M  +
Sbjct: 547 NLAFLKVYNGKHTEKTQLHIPNEMEFPRRLKLLHWEAYPKKSLPIGFCLENLVKFNMAFS 606

Query: 541 KVEQLWDDVQRL----------------------------------------PSSLCTFK 560
           K+E+LW+  Q L                                        PSS+    
Sbjct: 607 KLEKLWEGTQPLANLKEMNLAVSTHLKELPDLSKATNLESLNLNGCTALVEIPSSIVNLH 666

Query: 561 TPITFEIIDCKMLE-----------------------RLPDELENLEYLTVKGTTIRELP 597
                 +  C+ LE                       R PD   N++ + +  T + ELP
Sbjct: 667 KLSELGMSTCESLEVIPTLINLASLERIWMFQSLQLKRFPDSPTNVKEIEIYDTGVEELP 726

Query: 598 ESLGRLSWVKRL-ILSN--------------------NSNLERIPESIRHLSKLTFLFIS 636
            SL   + +  L I SN                    NS +ERI   I+ L  L FL ++
Sbjct: 727 ASLRHCTRLTTLDICSNRNFKTFSTHLPTCISWISLSNSGIERITACIKGLHNLQFLILT 786

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
            C++L++LPELP +L LL A +C SLE++   L + ++ L    C  +KL       I+K
Sbjct: 787 GCKKLKSLPELPDSLELLRAEDCESLERVSGPLKTPTATLRFTNC--IKLGGQARRAIIK 844

Query: 697 DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
             +          ++     PG EIP  F H+  G+S T+
Sbjct: 845 GSF----------VRGWALLPGGEIPAKFDHRVRGNSLTI 874


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 242/745 (32%), Positives = 361/745 (48%), Gaps = 114/745 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG D R  F SHL+  L+   I TF DD +L RG+ IS +LLG IE S  A++
Sbjct: 60  YDVFLSFRGTDVRKGFLSHLYKALTDNGIHTFRDDAELQRGNFISPALLGAIEQSRFAVV 119

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YA+SRW                      F+ VDPSHV++QS +F + F+   KR 
Sbjct: 120 VLSENYATSRWCLQELVHITKCVEKKQMELIPVFFGVDPSHVKRQSGNFAKAFAEHDKR- 178

Query: 100 PEK--MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGV 156
           P K  ++ W+ A+     +SG+DS     ESKLIEE+  D+  R+ +   + + G  +G+
Sbjct: 179 PNKDAVESWRKAMATVGFISGWDSRNWNEESKLIEELVQDLSDRIFSAVSTSDTGEWIGM 238

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
              +  I  L+      V  + IWG+GGI K TIA  ++      F G+    NV++  +
Sbjct: 239 STHMRSIYPLMSKDPNDVRMVGIWGMGGIGKTTIAKYIYKGFLSEFYGACLLENVKKEFK 298

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQL--NRLARKKVRIVF---------------- 256
             G   L++K+LSE+   KD N  N +S +   RL  KKV +V                 
Sbjct: 299 RHGPSHLREKILSEIFRKKDMNTWNKDSDVMKQRLQGKKVLLVLDDVDDIQQLEELAGSS 358

Query: 257 DDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
           D    GSR++ITTRD++VL      + Y +K L    A +LF + AF        + EL+
Sbjct: 359 DWFGPGSRIVITTRDRRVLDQHDVERIYEVKPLRTTQALQLFSKHAFKQPRPSEDYRELS 418

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
              ++   G+PLA++V+G  L  R  + WE  +  L         + LK+SY++LD+ +K
Sbjct: 419 LDVVEQLGGLPLAIQVVGGSLYRRELKFWEDKLDLLRNNGDNSAFKALKVSYEALDEIEK 478

Query: 377 NVFLDIACFLEGEHRDEVISIFD--------------------ASKSLINLDLFYRIRMH 416
            +FL +A    G + D V  + D                      K +I+L     + +H
Sbjct: 479 KIFLYVALCFNGVYMDRVRKVLDLCFVSSRRRVLPTRPSIVALMEKCMISLSKNKLLWVH 538

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI--EGISLDMNKVNREI 474
           DLL+DM  EI+ +     P KR  LW  +DI  V   N G EAI  E I LDM++ N E+
Sbjct: 539 DLLQDMAEEIICEGKDERPWKRLMLWDFEDINHVFSTNMGDEAIDVESIFLDMSEGN-EL 597

Query: 475 HMNSYAFSKMPKLRFLRFYGDKN-----KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NI 527
            +    F KMP L+ L FY + +       M+  LE +P   +R+L W    LK+L    
Sbjct: 598 SITPGIFKKMPNLKLLEFYTNSSVEESRTRMLDGLEYLP--TLRYLHWDAYHLKSLPPQF 655

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT 587
           C   LV L +  + ++ +W   Q+   +L +        +I CK L   PD         
Sbjct: 656 CTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLN------LISCKHLNEFPD--------- 700

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE-SIRHLSKLTFLFISHCERLQTLPE 646
                       L + + ++ L LSN  NL  IP+ S+R L+KL    +S+C+ L++LP 
Sbjct: 701 ------------LSKATNLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSNCKNLKSLPN 748

Query: 647 LPCNLGLLSARN-----CTSLEKLP 666
              N+ L S R+     C+SLE+ P
Sbjct: 749 ---NINLKSLRSLHLNGCSSLEEFP 770



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 15/137 (10%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG----TTIRELPESLGR-L 603
           +Q++P S+          +  CK L  LP+ ++NL++L   G      +   PE LGR +
Sbjct: 786 IQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPE-LGRSI 844

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCT 660
            W+      N + ++ +P +I   S+L +L +S C++L TLP     LG    L+ R C 
Sbjct: 845 RWLNL----NKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLGQLKYLNLRGCV 900

Query: 661 SLEKLP--AGLSSMSSV 675
           ++ + P  AG  +M ++
Sbjct: 901 NVTESPNLAGGKTMKAL 917


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 251/744 (33%), Positives = 370/744 (49%), Gaps = 106/744 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTRD F SHL   L  + +  FIDD+L RG  IS+SLL +IE S I+III
Sbjct: 23  YDVFLSFRGEDTRDKFISHLDLALRREGVNFFIDDKLDRGKQISKSLLKSIEGSRISIII 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR-- 98
           FS+ YASS W                      FY V PS V KQ+  FG  F++      
Sbjct: 83  FSQNYASSTWCLDEVVKIIECMRSKKQTVLPVFYNVSPSEVVKQTGIFGEAFAKYETNPL 142

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVI--RPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              K++ WK ALT AA LSG+D        E+ LI+++   V         +  K  V +
Sbjct: 143 MTNKIQPWKEALTTAATLSGWDLGNYWKNNEAHLIQDLVKKVSILKQTQLLNVAKHPVAI 202

Query: 157 ECSIEEIESLLC--IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           +  ++ IE L    +   GV  + I G+GGI K T+A A++NKI+  FE   F  NVRE 
Sbjct: 203 DSQLKAIEELASHGVSDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLSNVRET 262

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVF----------- 256
           +E+  G+  LQ+KLL+E+ KD N++  N++  +N    RL  +KV +V            
Sbjct: 263 SEQFNGLVQLQEKLLNEIFKDNNLKVDNVDKGMNIIKDRLCSRKVLMVLDDVDKDDQLDA 322

Query: 257 -----DDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                D    GS++I+TTRD+ +L+    +K + ++ L    + +LFC  AF   H   +
Sbjct: 323 LVGGRDWFGRGSKIIVTTRDRHLLETYSFDKIHPIQLLDCDKSLELFCWHAFKQSHPSRN 382

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + EL +  ++Y  G+PLAL +LG  LC R + +W+S + +L+  P   IE V +IS+  L
Sbjct: 383 YSELPE-LVRYCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAVFQISFKRL 441

Query: 372 DDSQ--KNVFLDIACFLEGEHRDEVISIFDA------SKSLINLDLFY------RIRMHD 417
            ++   K +FLDI CF  GE      ++  A      S+ +I +DL        +I+MHD
Sbjct: 442 PENPPVKEIFLDICCFFVGEDVSYSKNVLKACDPYLESRIIILMDLSLVTVEDGKIQMHD 501

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L+R MG+ IVR++S   P KR+RLW  K+  ++L + +GT  ++ I LD+   N  + + 
Sbjct: 502 LIRQMGQMIVRRKSFK-PEKRSRLWVAKEAVKMLIEKSGTHKVKAIKLDLRN-NGSLIVE 559

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKM 537
           + AF  M  LR L           + L    F  + +++W +         +   V    
Sbjct: 560 AEAFRNMENLRLLILQN------AAKLPTNIFKYLPNIKWIE--------YSSSSVRWYF 605

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTP-ITFEIIDCKM-----------LERLPD-----EL 580
           P + V      +  L  +  + K P I FE  DCKM           LE  PD      L
Sbjct: 606 PISFVVN--GGLVGLVINGVSNKHPGIIFE--DCKMLKHVDLSYWRLLEETPDFSAALNL 661

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           E L  L+ K   ++ +  S+  LS +  L L    NLE++P S   L  L  L +S C +
Sbjct: 662 EKLYLLSCK--RLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 719

Query: 641 LQTLPELPC--NLGLLSARNCTSL 662
           L+ +P+L    NL  L  R C  L
Sbjct: 720 LKEIPDLSASSNLKELHLRECYHL 743



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 22/145 (15%)

Query: 530 EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL-- 586
           ++L++LK+  C ++E+L       PS L   K+  +  + +C  +E+LP+  EN++ L  
Sbjct: 827 DQLIALKLDFCHQLEEL-------PSCL-RLKSLDSLSLTNCYKIEQLPEFDENMKSLRE 878

Query: 587 -TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             +KGT IR+LP S+  L  ++ LILS  +NL  +P  I  L  L  L +  C RL  LP
Sbjct: 879 MNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLP 938

Query: 646 ----------ELPCNLGLLSARNCT 660
                      L  NL +L  +NC 
Sbjct: 939 SGSSLNFPQRSLCSNLTILDLQNCN 963


>gi|297837527|ref|XP_002886645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332486|gb|EFH62904.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1037

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 231/744 (31%), Positives = 376/744 (50%), Gaps = 80/744 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL        I TF D+ + R   IS  L   I  S I+I++
Sbjct: 14  YNVFPSFHGPDVRVTFLSHLQKQFQHNGIITFNDEGIERSQTISSELTRAIRESRISIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            SE YASS W                      FY+VDPS VRKQ   FG+ F +  + + 
Sbjct: 74  LSENYASSSWCLNELLEISKCQESAGQIVMTVFYKVDPSDVRKQMGEFGKAFKKTCQGKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K+ RW  +LT  A+++G  S     E+ +IE+IA DV  +L+AT      G+VG+E  
Sbjct: 134 EAKIHRWTQSLTHVANIAGEHSLNWDNEANMIEKIARDVSDKLNATLSKDFDGMVGLEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR------E 213
           + +I+ LL   ++    L I G GGI K TIA A++N+ISR+F   YF  NV+      +
Sbjct: 194 LRKIQYLLQSETDEAMTLGISGPGGIGKTTIARALYNQISRNFPLRYFMENVKGSYRNID 253

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
            +E G    LQ++LLS++     ++  N++    RL  +KV I+ DDV S          
Sbjct: 254 CDEHGSKLRLQEQLLSQILNHNGVKICNLDVIYERLRCQKVLIILDDVDSLEQLDALAKD 313

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT+D+++L+    N  Y +      +A ++FC++AF          +L
Sbjct: 314 IYRFGHGSRIIVTTKDQELLQRYGINNTYHVGFPSNEEALEIFCRYAFRRSSPLYGFEKL 373

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +  +    +PL L+V+G  L G+ ++ W+  M +LE     ++E VL++ YDSL +  
Sbjct: 374 AIRVTELCSNLPLGLRVVGSSLRGKCEDEWKVIMNRLETSLDGDLERVLRVGYDSLHEKD 433

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           + +FL IA F   +  D V +I                ++SLI++     I MH LL+ M
Sbjct: 434 QALFLHIAIFFNYKDEDYVKAILGEDNLDVEHGLRNLVNRSLIDISTNGDIVMHKLLQQM 493

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR+ + ++    P KR  L    +I  VL+ +TGT  + GIS D + +++ + ++  AF 
Sbjct: 494 GRQAIHRQ---EPWKRQILIDAHEICDVLEYDTGTRTVAGISFDASNISK-VFVSEGAFK 549

Query: 483 KMPKLRFLRFYGDKNK-CMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAEKLVSLKMPC 539
           +M  L+FL    + ++ C+   L+  P   ++ L W   P K+L I    E LV L M  
Sbjct: 550 RMRNLQFLSVSDENDRICIPEDLQFPP--RLKLLHWEAYPRKSLPIRFYLENLVELDMQN 607

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIREL 596
           +++E+LW    + P  L   K     ++   + L+ LPD     NL+ L +    ++ E+
Sbjct: 608 SQLEKLW----KGPQLLTNLK---KMDLSMSRHLKELPDLSNATNLKRLNLDDCESLVEI 660

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           P S   L  +K L +   + LE IP  + +L+ L  + ++ C+RL+  P++  N+  LS 
Sbjct: 661 PSSFSNLHKLKVLSMFACTKLEVIPTRM-NLASLESVNMTACQRLKNFPDISRNILQLSI 719

Query: 657 RNCTSLEKLPAGLSSMSSVLYVNL 680
            + T++E++PA +   S +  +N+
Sbjct: 720 -SLTAVEQVPASIRLWSRLRVLNI 742


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 262/815 (32%), Positives = 392/815 (48%), Gaps = 150/815 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L  + I TF DD QL RG  IS  LL  IE S  AI+
Sbjct: 19  YDVFLSFRGEDTRKGFTDHLYDKLQWQGITTFRDDPQLERGKAISPELLTAIEQSRFAIV 78

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           + S  YASS W                     FY VDPSHVR Q  SF   F    ++F 
Sbjct: 79  VLSPNYASSTWCLLELSKILECMEERGTILPIFYEVDPSHVRHQRGSFAEAFQEHDEKFG 138

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT---FQSKNKGLVGVE 157
                                       +LI+EI   +  ++  +   F S +K L G++
Sbjct: 139 ---------------------------VELIKEIVQALWSKVHPSLTVFGSSDK-LFGMD 170

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             +EEI++LL   +  V  + IWG+GG+ K T+A  V+  IS  FE   F  NVRE   T
Sbjct: 171 TKLEEIDALLDKEANDVRFIGIWGMGGMGKTTLARLVYENISHQFEVCIFLANVREVSAT 230

Query: 218 GGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTSG--------- 262
            G+  LQK++LS++ K+ N++  ++ S +  + R    K+V +V DDV            
Sbjct: 231 HGLVHLQKQILSQILKEENVQVWDVHSGITMIKRCVCNKEVLLVLDDVDHSEQLKNLVGE 290

Query: 263 -------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                  SR+IITTR++ VL      K+Y +K L   +A +LF   AF     +  + E 
Sbjct: 291 KDYFGLRSRIIITTRNRHVLVEHDIEKQYELKGLEEDEALQLFSWKAFRKIEPEEDYAEQ 350

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +   ++YA+G+PLALK+LG +L  RS + W SA +KL+  P+  + E+LKIS+D LD+ +
Sbjct: 351 SKSFVRYAEGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEILKISFDGLDEME 410

Query: 376 KNVFLDIACF---------LEGEHRDEVISIFD----ASKSLINLDLFYRIRMHDLLRDM 422
           K  FLDIACF         +E  +  E+ S         KSLI +     + +HDL+++M
Sbjct: 411 KKTFLDIACFRRLYDNESMIEQVYSSELCSRIAIEVLVEKSLITISFGNHVYVHDLIQEM 470

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREIVR+E+   PG R+RLW   +I+ V  KNTGTE  EGI L ++++  E   N  AFS
Sbjct: 471 GREIVRQEN-EEPGGRSRLWLRNNIFHVFTKNTGTEVTEGIFLHLHEL-EEADWNLEAFS 528

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           KM  L+ L  +  +      +L       +R L+W   P K+L      ++L  L    +
Sbjct: 529 KMCNLKLLYIHNLRLSLGPKYLPDA----LRILKWSWYPSKSLPPGFQPDELTELSFVHS 584

Query: 541 KVEQLWDDVQ-----------------RLPS-----------------------SLCTFK 560
            ++ LW+ ++                 R P                        S+   K
Sbjct: 585 NIDHLWNGIKYLDKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLK 644

Query: 561 TPITFEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
               +   +CK ++ LP E  +E LE   V G + ++ +PE +G+   + +L L   + +
Sbjct: 645 RLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGGTA-V 703

Query: 618 ERIPESIRHLSK------LTFLFISHCERLQTLPE--LPCNLGLLSARNCTSLEKLPAGL 669
           E++P SI HLSK      L+ + I        L +  +  + GLL  ++   L  L A L
Sbjct: 704 EKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKSPHPLIPLLASL 763

Query: 670 SSMSSV--LYVNLCNFLKLD-PNELSEIVKDGWMK 701
              SS+  L +N CN  + + PN++  +    W++
Sbjct: 764 KQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLE 798



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 16/151 (10%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL- 653
           E+P  +G L  +  L L  N N   +P SI  LSKL+++ + +C+RLQ LPELP +  L 
Sbjct: 783 EIPNDIGSLPSLNWLELRGN-NFVSLPASIHLLSKLSYIDLENCKRLQQLPELPASDYLN 841

Query: 654 LSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
           ++  +CTSL     P  LS  S    +   N L    N+ +       +K  L E     
Sbjct: 842 VATDDCTSLLVFPDPPDLSRFS----LTAVNCLSTVGNQDASYYLYSVIKRLLEE---TP 894

Query: 712 KSMYF-----PGNEIPKWFRHQSMGSSATLK 737
            S +F     PG+EIP+WF +QS+G   T K
Sbjct: 895 SSFHFHKFVIPGSEIPEWFNNQSVGDRVTEK 925


>gi|357499355|ref|XP_003619966.1| Resistance protein [Medicago truncatula]
 gi|355494981|gb|AES76184.1| Resistance protein [Medicago truncatula]
          Length = 725

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 241/715 (33%), Positives = 356/715 (49%), Gaps = 98/715 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TF+DD +L RGD I +SL   IE S I I 
Sbjct: 18  YQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFMDDRELQRGDEIKRSLDNAIEESRIFIP 77

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           +FS  YASS +                     FY +DP++VR     +G   ++  KRF 
Sbjct: 78  VFSANYASSSFCLDELVQIINCKEKGRVVLPVFYGMDPTNVRHHRGIYGEALAKHEKRFQ 137

Query: 101 ------EKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKG 152
                 E+++RWK AL +AA+LSG+      P  E + I +I  D+L + +       K 
Sbjct: 138 NDMDNMERLQRWKVALNQAANLSGYH---FSPGYEYEFIGKIVRDILDKTERVLHVA-KY 193

Query: 153 LVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG++  +E+++ LL + S EGV  + ++G GG+ K T+A A++N ++  FEG  F   V
Sbjct: 194 PVGLKSRVEQVKLLLDMESDEGVHMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHKV 253

Query: 212 REAEETGGIKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVTS----- 261
           RE      +K LQK+LL +  K           I     RL R K+ ++ DDV       
Sbjct: 254 RENSTHNSLKHLQKELLLKTVKLNIKLGDASEGIPLIKERLNRMKILLILDDVDKLEQLE 313

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +L      + Y +  L   +A +L    AF    + +
Sbjct: 314 ALAGGLDWFGHGSRVIITTRDKHLLTCHGIERTYAVNGLHETEAFELLRWMAFKNGEVPS 373

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++A+ YA G+PL L+++G  L G+S E W+  +   E IP+ EI+ +LK+SYD+
Sbjct: 374 SYNDVLNRAVAYASGLPLVLEIVGSNLFGKSMEEWQCTLDGYEKIPNKEIQRILKVSYDA 433

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMH 416
           L++ Q++VFLDIAC  +G    E   I                A KSLI       +R+H
Sbjct: 434 LEEEQQSVFLDIACCFKGGSWIEFEDILKYHYGRCIKHHVGVLAEKSLI-YQYGLSVRLH 492

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL+ DMG+EIVR+ES   PG+R+RLW H DI  VL++NTGT  IE + L        I  
Sbjct: 493 DLIEDMGKEIVRQESPKEPGERSRLWCHDDIIHVLEENTGTSKIEMVYLHCPSTEPVIDW 552

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLK 536
           N  AF KM KL+ L            +L       +R L+W   P K+L+ C        
Sbjct: 553 NGKAFKKMKKLKTLVIENGHFSKGPKYLSSC----LRVLKWKGYPSKSLSSCF------- 601

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
                + + +++++ L    C + T I   + D   LE+L         L +    +  +
Sbjct: 602 -----LNKKFENMKVLILDYCEYLTCIP-NVSDLPNLEKL---------LFINCHNLITI 646

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
             S+G L+ ++ LI    S LE  P     L+ L  L +  C RL++ PEL C +
Sbjct: 647 HNSIGYLNKLETLIAKYCSKLESFPP--LQLASLKILELYECFRLKSFPELLCKM 699


>gi|105922831|gb|ABF81439.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1178

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 285/935 (30%), Positives = 422/935 (45%), Gaps = 213/935 (22%)

Query: 7   SFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSER 65
           SFRG+DTR+NFTSHL+  L+ + I  ++DD +L RG  I  +L   IE S  ++IIFS  
Sbjct: 203 SFRGKDTRNNFTSHLYSNLAQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRD 262

Query: 66  YASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMK 104
           YASS W                      FY VDPS   +++  F  H    ++   EK++
Sbjct: 263 YASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSETYEKA--FVEHEQNFKENL-EKVQ 319

Query: 105 RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE 164
            WK+ L+   +LSG+                 DV K ++  ++ +  G            
Sbjct: 320 IWKDCLSTVTNLSGW-----------------DVRKSING-YKGEETGEAIFIGICGMGG 361

Query: 165 SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDL 223
                                 K T+A  ++++I   FEGS F  NVRE   E  G + L
Sbjct: 362 I--------------------GKTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRL 401

Query: 224 QKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS----------------G 262
           Q++LLSE+  +      + R I     RL  KK+ ++ DDV                  G
Sbjct: 402 QEQLLSEILMERASVWDSFRGILMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPG 461

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SR+IIT+R   VL      K Y  ++L   DA  LF Q AF  D      + L+ + + Y
Sbjct: 462 SRIIITSRHSNVLTGIDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVGLSKQVVDY 521

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A G+PLAL+V+G +L GRS   W  A+ ++  IP  +I +VL+IS+D L +S + +FLDI
Sbjct: 522 ANGLPLALEVIGSFLYGRSIPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDQKIFLDI 581

Query: 383 ACFLEGEHRDEVISIFD-------------ASKSLINLDLFYR--IRMHDLLRDMGREIV 427
           ACFL+G  +D +  I D               +SLI++   YR  + MH+LL+ MG+EIV
Sbjct: 582 ACFLKGFKKDRITRILDRCGFNASIGIPVLIERSLISV---YRDQVWMHNLLQIMGKEIV 638

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R ES   PG+R+RLW ++D+   L  NTG E IE I LDM  + +E   N  AFSKM KL
Sbjct: 639 RCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSKL 697

Query: 488 RFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQL 545
           R L+     +   VS        ++R LEW  CP K+L  ++  ++LV L M  + +EQL
Sbjct: 698 RLLKI----DNMQVSEGPEDLSNKLRFLEWHSCPSKSLPADLQVDELVELHMANSSLEQL 753

Query: 546 WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSW 605
           W             K+ +  +II+                       + + P+  G L+ 
Sbjct: 754 WYGC----------KSAVNLKIINLS-----------------NSLNLIKTPDFTGILN- 785

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR-----NCT 660
           ++ LIL   ++L  +  S+ H  KL ++ + +C+R++ LP    NL + S +      C+
Sbjct: 786 LENLILEGCTSLFEVHPSLAHHKKLQYVNLVNCKRIRILPN---NLEMESLKVCILDGCS 842

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE 720
            LEK P    +M                N L E+  DG                   GNE
Sbjct: 843 KLEKFPDIGGNM----------------NCLMELYLDG------------------TGNE 868

Query: 721 IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNV 780
           IP WF HQS GSS +++   P         S  F A V F A+              G  
Sbjct: 869 IPGWFNHQSKGSSISVQV--PN-------WSMGFVACVAFSAY--------------GER 905

Query: 781 YAVCCDWKRKSEGHLYSWFLGKISYVE--SDHVFLGCNSFGGEYFGPNYDEFSF-RIHCS 837
             + CD+K     +  S     ++ ++  SDH++L   SF        +   SF  I  S
Sbjct: 906 PLLRCDFKANGRENYPSLMCISLNSIQLLSDHLWLFYLSFDYLKEVKEWKHGSFSNIELS 965

Query: 838 FHFPPYLERGEVKKCGI-----HFVYAQDSADHIL 867
           FH   Y  R +VK CG+      ++ +Q SA  I+
Sbjct: 966 FH--SYKRRVKVKNCGVCLLSSIYITSQPSAHFIV 998


>gi|357469491|ref|XP_003605030.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506085|gb|AES87227.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1391

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 251/798 (31%), Positives = 384/798 (48%), Gaps = 151/798 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           +D+FLSFRG  TR +FT HL+H L    I  F DDQ I  GD I  SLL  IEAS I+I+
Sbjct: 10  HDIFLSFRG-GTRYSFTDHLYHSLLRHGINVFRDDQNINIGDEIGTSLLKAIEASRISIV 68

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +    YASS W                      FY+++PS VR     FG+         
Sbjct: 69  VLCRDYASSTWCLDELVKIVDCYDKNRKSVFVIFYKIEPSDVR-----FGKE-------- 115

Query: 100 PEKMKRWKNALTEAADLSGF---DSNVIRP------------------------------ 126
            EK+K W+ AL     LSG    D+ ++R                               
Sbjct: 116 SEKVKAWRLALNRVCALSGLHCKDNMIVRQQWSRKSYQAFALNMCHTSVIGVSDTAIRLI 175

Query: 127 --------------ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE 172
                         E + IE+I  ++  +L      + K LVG++   E+++SL+   S+
Sbjct: 176 LEVSVLHKVKEFDYEYEFIEKIVKEISAKL-PPIPLQIKHLVGLDSRFEQVKSLIDTNSD 234

Query: 173 -GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EETGGIKDLQKKLLS 229
             VC L I+G GGI K T A  +++KIS  FE + F  NVRE   E T G++DLQ+ LLS
Sbjct: 235 DAVCMLEIYGGGGIGKTTFAWNIYSKISHRFEATSFLANVREKSNESTRGLEDLQRTLLS 294

Query: 230 ELSKD-----GNMRNIESQLN-RLARKKVRIVFDDVTS----------------GSRVII 267
           E+  +     G+     S +  +L+ ++V ++ DDV S                GS VI+
Sbjct: 295 EMGVETQTMIGSTSTGSSVIKCKLSNRRVLLILDDVDSVKQLESLAGGQDWFGSGSIVIV 354

Query: 268 TTRDKQVL---KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQ 324
           TTRD  VL   K+    K Y+ +EL + ++ +LFC +AF       +  +++ +AI YA+
Sbjct: 355 TTRDIDVLHKHKHDIKIKTYKFEELNHHESTELFCWYAFNMSRPVENFEKISSQAISYAK 414

Query: 325 GVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIAC 384
           G+PLALK +G  L G+S E W+  +++   +P  EI+ VL+ISY+ L D ++  FLDIAC
Sbjct: 415 GIPLALKAIGSNLKGKSIEEWDIELQRYRKVPDAEIQGVLEISYNGLSDLEQKAFLDIAC 474

Query: 385 FLEGEHRDEVISIFDA-----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESIN 433
           F +GE  D V  I +A           SK L+ +D    I MHDL++DMGREIVRKES +
Sbjct: 475 FFKGERWDYVKRIQEACDFFPVIRVFVSKCLLTVDENGCIEMHDLIQDMGREIVRKESTS 534

Query: 434 HPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY 493
           +PG+R+RLW H D+  VLK N G+  +EGI L   K  +  H    AF KM  LR L   
Sbjct: 535 NPGERSRLWSHHDVLGVLKGNLGSTTVEGIMLHPPKQEKVDHWAYNAFQKMKNLRILIVR 594

Query: 494 GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR 551
                   S+L       +R L+W   P K    +    ++V  K+P + +         
Sbjct: 595 NTLFSFGPSYLPN----SLRLLDWKWYPSKNFPPDFYPYRMVDFKLPHSSM--------I 642

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGRLSWVKR 608
           L +S   F+      +   + + ++P+    +NL  LTV K   +    +S G L  +  
Sbjct: 643 LKNSFRIFEDLTFINLSHSQSITQIPNLSGAKNLRVLTVDKCHKLVRFEKSNGFLPNLVY 702

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL------PCNLGLLSARNCTSL 662
           L  S  S L+     + +L  L  L  + C++ +  P++      P  + ++S    T++
Sbjct: 703 LSASGCSELKSFVPKM-YLPSLQELSFNFCKKFKHFPQVMQKMDKPLKIHMIS----TAI 757

Query: 663 EKLPAGLSSMSSVLYVNL 680
           ++ P  + ++  + Y+++
Sbjct: 758 KEFPKSIGNLKGLEYMDM 775


>gi|41387774|gb|AAS01763.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1160

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 244/746 (32%), Positives = 368/746 (49%), Gaps = 95/746 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP-- 100
           +FS  YASS W                   FY VDPS VR Q   FG+ F    KR    
Sbjct: 71  VFSINYASSSWCLNELLEIVNCNDKIVIPVFYHVDPSQVRHQIGDFGKIFENTCKRQTDE 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E   +WK ALT  A++ GFDS     E+K+IEEIANDVL +L  T    ++ LVG+E  I
Sbjct: 131 EVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGKLLLTTPKDSEELVGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSY-----FALNVREAE 215
            E+  LL + SE V  + I G  GI K TIA A+F ++SRHF+GS      F  N R   
Sbjct: 191 AEMSLLLQLESEEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSNSRNIY 250

Query: 216 ETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKV---------RIVFDD 258
                 D      LQ   LSE+   KD  + +  +   RL  +KV          +V D 
Sbjct: 251 SGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERLKHQKVLIIIDDLDDIMVLDT 310

Query: 259 VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           +         GSR+I+ T DK  L     +  Y +       A+++ CQ AF  ++    
Sbjct: 311 LVGQTQWFGYGSRIIVVTNDKHFLTAHGIDHIYEVSFPTDVHAYQMLCQSAFKQNYAPKG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--IEEVLKISYD 369
             +L    +++A   PL L +LG YL  R  E W   + +LE    ++  IE++L+ISYD
Sbjct: 371 FEDLVVDVVRHAGSFPLGLNLLGKYLRRRDMEYWMDMLPRLENGLRIDGKIEKILRISYD 430

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDL 418
            L+   + +F  IAC         + S+             A KSLI++   Y + MH  
Sbjct: 431 GLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGY-VVMHRS 489

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGR+IVR +SI+ PG+R  L    DI+ +L   TGT+ + GISLD   + RE+ ++ 
Sbjct: 490 LQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDTRNI-RELDVHQ 548

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            AF  M  LRFL     + K    HL    + +P   ++ L W + P++ +  +   E L
Sbjct: 549 RAFKGMSNLRFLEIKNFRLKEDSLHLPPSFDYLP-RTLKLLSWSKFPMRCMPFDFRPENL 607

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT----FEIIDCKMLERLPD--ELENLEYL 586
           V L+M  +K+ +LW+              P+T     ++     L+ +PD  +  NLE L
Sbjct: 608 VKLEMKYSKLHKLWEG-----------DVPLTCLKEMDLYASSNLKVIPDLSKATNLEIL 656

Query: 587 TVK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPE--SIRHLSKLTFLFISHCERLQT 643
            ++   ++ ELP S+  L+ +  L + +  +L+ +P   +++ L +L F   SHC +L+T
Sbjct: 657 NLQFCLSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGFNLKSLDRLNF---SHCSKLKT 713

Query: 644 LPELPCNLGLLSARNCTSLEKLPAGL 669
            P+   N+ +L+    T++E+ P+ L
Sbjct: 714 FPKFSTNISVLNLSQ-TNIEEFPSNL 738



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 580 LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
           LENL  L        ELP S   L+ +KRL +    NLE +P  I +L  L  L    C 
Sbjct: 781 LENLPSLV-------ELPSSFQNLNQLKRLFIVRCINLETLPTGI-NLQSLDSLSFKGCS 832

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLK 685
           RL++ PE+  N+ +L   + T++E +P  +   S++  L ++ C+ LK
Sbjct: 833 RLRSFPEISTNISVLYL-DETAIEDVPWWIEKFSNLTELSMHSCSRLK 879


>gi|359493383|ref|XP_002279002.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 945

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 267/827 (32%), Positives = 406/827 (49%), Gaps = 119/827 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I TF DD+ L +G +I+  L   IE S I I+
Sbjct: 18  YDVFLSFRGEDTRKNFTDHLYKNLDAYGICTFRDDEELEKGRDIAFDLSRAIEESKIFIV 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+SRW                      FY V+PS VRKQ  S+G  FS   K  
Sbjct: 78  IFSKNYANSRWCLNELLKIIESMEKEGKIVLPIFYHVNPSDVRKQLGSYGDAFSNHEKDA 137

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN--KGL 153
            E    ++++W+ AL++A++LSG+  +  + E+ +++EI +D+++RL+   Q  N  K +
Sbjct: 138 DEEKKARIQKWRTALSKASNLSGWHIDE-QYETNVLKEITDDIIRRLNHD-QPLNVGKNI 195

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+   +E+++SL+      VC + I GIGGI K T+A A++N++S  ++GS F   V+E
Sbjct: 196 VGMSFHLEKLKSLMKKKFNEVCVVGICGIGGIGKTTVAMAIYNELSNQYDGSSFLRKVKE 255

Query: 214 AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDVT------- 260
             E   ++ LQ +LL ++   K   + NI+  +  + R    K+V +VFDDV        
Sbjct: 256 RSERDTLQ-LQHELLQDILRGKSLKLSNIDEGVKMIKRSLSSKRVLVVFDDVDNLKQLEY 314

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    + S +IITTRDK +L     N +Y +  L   +A +LF  WAF  +  +  
Sbjct: 315 LAEEQGWFGAKSTIIITTRDKNLLAQYGVNIEYEVTTLNEEEAIELFSLWAFRQNLPNKV 374

Query: 312 HIELTDKAIKYAQGVPLALKVLGC-YLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +L  + ++YA+G+PLALKVLG  +   ++KE W+SA+ KL+      I  VL+ SYD 
Sbjct: 375 DQDLFYEVVRYAKGLPLALKVLGSNFFDKKTKEEWKSALEKLKKSSDERIYSVLRTSYDG 434

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLR 420
           LD   K++FLDIACF +G+ +D V  I              K LI +     + MHD+++
Sbjct: 435 LDSVDKDIFLDIACFFKGKDKDFVSRILGPYAKNGIRTLEDKCLITISA-NMLDMHDMVQ 493

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG  IV +E    PG R+RLW   D   VL KNTGT+AIEG+ ++++ +   I     A
Sbjct: 494 QMGWNIVHQECPKDPGGRSRLW-GSDAEFVLTKNTGTQAIEGLFVEISTL-EHIEFTPKA 551

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCT 540
           F KM +LR L+ Y                                         L +  +
Sbjct: 552 FEKMHRLRLLKVY----------------------------------------QLAIYDS 571

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL 600
            VE    D++   ++L +      F + D  +L+     L +L+ L +    IR +P  +
Sbjct: 572 VVE----DLRVFQAALISSNAFKVFLVEDGVVLDIC--HLLSLKELHLSSCNIRGIPNDI 625

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             LS ++ L L  N +   IP  I  L  LT L + HC +LQ +PELP +L LL     +
Sbjct: 626 FCLSSLEILNLDGN-HFSSIPAGISRLYHLTSLNLRHCNKLQQVPELPSSLRLLDVHGPS 684

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE 720
                   L      L   L + ++   N +       +   S Y   GI   +  PG+ 
Sbjct: 685 DGTSSSPSLLPPLHSLVNCLNSAIQDSENRIRRNWNGAYFSDSWYSGNGI--CIVIPGSS 742

Query: 721 -IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA-FCAVVVFPAFLK 765
            IPKW +++  GS   +   P      N  + FA +C     P+ L+
Sbjct: 743 GIPKWIKNKRKGSEIEIGL-PQNWHLNNDFLGFALYCVYAPVPSNLE 788


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 255/815 (31%), Positives = 396/815 (48%), Gaps = 149/815 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRG DTRD  T  L+  L  + ++ F+DD  L RG+ I Q L+  I+ S   I+
Sbjct: 23  WDVFLSFRGIDTRDTITKGLYSSLEARGVRVFLDDVGLERGEEIKQGLMEAIDDSAAFIV 82

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE-K 102
           I SE YA+S W                  FYRVDPSHVR Q   F   F    +RF + +
Sbjct: 83  IISESYATSHWCLEELTKICDTGRLVLPVFYRVDPSHVRDQKGPFEAGFVEHERRFGKNE 142

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           +  W+ A  +   +SG+  N    E  LI  +   ++K L  T     K  VG++  +E+
Sbjct: 143 VSMWREAFNKLGGVSGWPFND-SEEDTLIRLLVQRIMKELSNTPLGAPKFAVGLDERVEK 201

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIK 221
           +  +L + S GV  L ++G+GG+ K T+A A+FN +  HFE   F  NVRE + +  G+ 
Sbjct: 202 LMKVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNNLLNHFEHRCFISNVREVSSKQDGLV 261

Query: 222 DLQKKLLSELSKDGNMRNIES---------------------QLNRLARKKVRIVFDDVT 260
            L+ K++ +L  +     I S                     QL+ L  K  R  F D  
Sbjct: 262 SLRTKIIEDLFPEPGSPTIISDHVKARENRVLLVLDDVDDVKQLDALIGK--REWFYD-- 317

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
            GSRVIITTRD  ++KN   N+ Y ++EL + +A +LF   A   +    + + L+ K +
Sbjct: 318 -GSRVIITTRDTVLIKN-HVNELYEVEELNFDEALELFSNHALRRNKPPENFLNLSKKIV 375

Query: 321 KYAQGVPLALKVLGCYLCGRSK-EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
                +PLAL+V G +L  + + E WE A+ KL  I    +++VLKISYD+LD+ +K +F
Sbjct: 376 SLTGRMPLALEVFGSFLFDKRRVEEWEDAVEKLRQIRPKHLQDVLKISYDALDEEEKCIF 435

Query: 380 LDIACFL--EGEHRDEVISIFDA-------------SKSLINL-DLFYRIRMHDLLRDMG 423
           LD+AC     G  RD+VI +                 K LI + D    + MHD +RDMG
Sbjct: 436 LDMACLFVQMGMKRDDVIDVLRGCGFRGEIAITVLVQKCLIKITDEDNTLWMHDQIRDMG 495

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN--------------- 468
           R+IV  ESI  PGKR+RLW   +I  VLK + GT  I+GI LD                 
Sbjct: 496 RQIVVDESIVDPGKRSRLWDRAEIMSVLKGHMGTRCIQGIVLDFEEDRFYRSKAESGFST 555

Query: 469 ------------------------------KVNREIHMNSYAFSKMPKLRFLRFYGDKNK 498
                                         + N+E+ +++ +F  M  LR L+    +  
Sbjct: 556 NLQWRSSLRNVLGGIIEQCLCLKNYLHPQAEENKEVILHTKSFEPMVNLRQLQINNRR-- 613

Query: 499 CMVSHLEG--VPFAEVRHLEWPQCPLKTLNICA--EKLVSLKMPCT-KVEQLWD-DVQRL 552
                LEG  +P AE++ L+W  CPLK + + +   +L  L +  + K+E LW  +  ++
Sbjct: 614 -----LEGKFLP-AELKWLQWQGCPLKHMPLKSWPRELAVLDLKNSKKIETLWGWNDYKV 667

Query: 553 PSSLCTFKTPITFEII------DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
           P +L         E+        C+ LE++  +LEN   LT        + +S+G LS +
Sbjct: 668 PRNLMVLNLSYCIELTAIPDLSGCRRLEKI--DLENCINLT-------NIHDSIGSLSTL 718

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA-----RNCTS 661
           + L L+  S+L  +P  +  L +L  LF+S C +L++LPE   N+G+L +      + T+
Sbjct: 719 RSLKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPE---NIGILKSLKALHADGTA 775

Query: 662 LEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEI 694
           + +LP  +  ++ +  L +  C  L+  P+ +  +
Sbjct: 776 ITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHL 810



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEY---LTVKGTTIRELPESLGRLSW 605
            ++ LPS++ +        + +CK L +LP+ ++ L     L + GTTI +LP+ +G +  
Sbjct: 870  IKELPSTIGSLYYLRELSVGNCKFLSKLPNSIKTLASVVELQLDGTTITDLPDEIGEMKL 929

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSL 662
            +++L + N  NLE +PESI HL+ LT L + +   ++ LPE      NL  L    C  L
Sbjct: 930  LRKLEMMNCKNLEYLPESIGHLAFLTTLNMFNG-NIRELPESIGWLENLVTLRLNKCKML 988

Query: 663  EKLPAGLSSMSSVLY 677
             KLPA + ++ S+ +
Sbjct: 989  SKLPASIGNLKSLYH 1003



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 162/433 (37%), Gaps = 100/433 (23%)

Query: 512  VRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCK 571
            +R LE   C  K L    E +  L    T +     +++ LP S+   +  +T  +  CK
Sbjct: 930  LRKLEMMNC--KNLEYLPESIGHLAF-LTTLNMFNGNIRELPESIGWLENLVTLRLNKCK 986

Query: 572  MLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKRLILSNNSNLE---------- 618
            ML +LP  + NL+ L    ++ T +  LPES GRLS ++ L ++   NL           
Sbjct: 987  MLSKLPASIGNLKSLYHFFMEETCVASLPESFGRLSSLRTLRIAKRPNLNTNENSFLAEP 1046

Query: 619  -------------------------------RIPESIRHLSK------------------ 629
                                           +IP+    LS+                  
Sbjct: 1047 EENHNSFVLTPSFCNLTLLTELDARSWRISGKIPDEFEKLSQLETLKLGMNDFQKLPSSL 1106

Query: 630  -----LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
                 L  L + +C +L +LP LP +L  L+  NC +LE +   +S++ S+  + L N +
Sbjct: 1107 KGLSILKVLSLPNCTQLISLPSLPSSLIELNVENCYALETI-HDMSNLESLKELKLTNCV 1165

Query: 685  KLDP-------NELSEIVKDGWMKHSLYEERGIKK-------SMYFPGNEIPKWFRHQSM 730
            K+           L  +   G +  S    + + K       ++  PG ++P+WF  Q++
Sbjct: 1166 KVRDIPGLEGLKSLRRLYLSGCVACSSQIRKRLSKVVLKNLQNLSMPGGKLPEWFSGQTV 1225

Query: 731  GSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRK 790
              S   K    +      ++S      +  P   +   H  G  D   NV         K
Sbjct: 1226 CFSKP-KNLELKGVIVGVVLSINHNINIGIPNMQR--EHMPGVLDVQANVL--------K 1274

Query: 791  SEGHLYSWFLG--KISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE 848
                L+S  L    +   + +H+ L       +      D  +F +  S   PP+ +  E
Sbjct: 1275 QGKTLFSTVLNICGVPRTDEEHIHLCRFHDYHQLIAILKDGDTFCV--SKRNPPFDKGLE 1332

Query: 849  VKKCGIHFVYAQD 861
            +K+CG+H ++  D
Sbjct: 1333 LKQCGVHLIFEGD 1345



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 39/240 (16%)

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
           + +H +  A +++P+  F           ++ LE +     +HL   + P    ++C+ K
Sbjct: 767 KALHADGTAITELPRSIF----------RLTKLERLVLEGCKHLR--RLPSSIGHLCSLK 814

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---V 588
            +SL             ++ LP S+ +        ++ C+ L  +PD + +L  LT    
Sbjct: 815 ELSLYQ---------SGLEELPDSIGSLNNLERLNLMWCESLTVIPDSIGSLISLTQLFF 865

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
             T I+ELP ++G L +++ L + N   L ++P SI+ L+ +  L +       T+ +LP
Sbjct: 866 NSTKIKELPSTIGSLYYLRELSVGNCKFLSKLPNSIKTLASVVELQLDGT----TITDLP 921

Query: 649 CNLG------LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
             +G       L   NC +LE LP  +  ++ +  +N+ N    +  EL E +  GW+++
Sbjct: 922 DEIGEMKLLRKLEMMNCKNLEYLPESIGHLAFLTTLNMFNG---NIRELPESI--GWLEN 976



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 53/196 (27%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSWVKR 608
           LP  +   K   +  +  C  L+ LP+    L++L+ L   GT I ELP S+ RL+ ++R
Sbjct: 732 LPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTAITELPRSIFRLTKLER 791

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISH-----------------------CERLQTLP 645
           L+L    +L R+P SI HL  L  L +                         CE L  +P
Sbjct: 792 LVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLERLNLMWCESLTVIP 851

Query: 646 --------------------ELPCNLGL------LSARNCTSLEKLPAGLSSMSSVLYVN 679
                               ELP  +G       LS  NC  L KLP  + +++SV+ + 
Sbjct: 852 DSIGSLISLTQLFFNSTKIKELPSTIGSLYYLRELSVGNCKFLSKLPNSIKTLASVVELQ 911

Query: 680 LCNFLKLD-PNELSEI 694
           L      D P+E+ E+
Sbjct: 912 LDGTTITDLPDEIGEM 927



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 534  SLKMPCTKVEQLWD--DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
            S+K   + VE   D   +  LP  +   K     E+++CK LE LP+ + +L +LT    
Sbjct: 900  SIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMNCKNLEYLPESIGHLAFLTTLNM 959

Query: 592  ---TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
                IRELPES+G L  +  L L+    L ++P SI +L  L   F+        +  LP
Sbjct: 960  FNGNIRELPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEET----CVASLP 1015

Query: 649  CNLGLLSARNCTSLEKLP 666
             + G LS+     + K P
Sbjct: 1016 ESFGRLSSLRTLRIAKRP 1033


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 235/744 (31%), Positives = 378/744 (50%), Gaps = 126/744 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR NFT  LH  L  ++I+T+ID  +  GD +   L+  I  S I++I+
Sbjct: 9   YDVFISFRGEDTRKNFTGKLHEALKKENIETYIDLYVKVGDEVGPMLIQAIHESQISVIV 68

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSH-SFGRHFSRLRKRF 99
           FS+ + +S+W                     F+Y  DPS++      S+ + F+R  +  
Sbjct: 69  FSKNFVTSKWCLEELLHILECRKHHGQVVLPFYYETDPSNIVGLGKGSYEKAFARYEREL 128

Query: 100 ----------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK 149
                     P K+ +WK AL E A +S  DS     +S+ I+ I  DVL+ L   + ++
Sbjct: 129 MNNQCDDLTNPGKVSKWKAALVEVAAISARDSRHYSDDSQFIQCIVKDVLQTLSRLYPNE 188

Query: 150 NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
            + L+ ++   EE+E+ L    + V ++ IWG+ G+ K TIA  +F+K   HF+ S F  
Sbjct: 189 LRDLIQIDEKGEEVENYL----KKVPRIGIWGMDGLGKTTIARQMFSKHFMHFDSSCFLE 244

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSG------- 262
           ++ +  +  G+  L+ KLL++L K    + I S  + ++ K+V IV DDV +G       
Sbjct: 245 SISQGLKEFGLPYLRDKLLNDLLK---QKIITSDFHGISGKRVFIVLDDVDNGMQLDYLC 301

Query: 263 ---------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                    SR+IITT+++  L N   ++ Y +++  + ++ +LFC  AF   H    + 
Sbjct: 302 GELNDLAPNSRIIITTKNRDTL-NGRVDEIYEVEKWKFKESLELFCLAAFKQKHPKVGYE 360

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPH--VEIEEVLKISYDSL 371
            L+++A+  A+GVPLALKVLG +L  R+ E WE  +  L+       EI+++L++SY+ L
Sbjct: 361 RLSERAVACARGVPLALKVLGSHLHSRNLEFWEFELNYLDSKGESLCEIQDMLRVSYNGL 420

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
              +K +FLDIA F + E++D V SI DA              K+LI +    +I+MHDL
Sbjct: 421 KAPEKEMFLDIAFFFKDENKDFVTSILDACGFDATSGIHILKDKALITISNDNKIQMHDL 480

Query: 419 LRDMGREIV---RKESINHPGKRNRLWHHKDIYQVLKKNTGT-EAIEGISLDMNKVNREI 474
            + +  +IV   + +    P K +RL   +++  +LK N GT   IEGI+ D+ +   ++
Sbjct: 481 HQKLAFDIVQYKKDQRRRDPRKCSRLRDIEEVCGLLKNNKGTHNKIEGITFDLTQ-KVDL 539

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHL----EGV-PFAE-VRHLEWPQCPLKTL--N 526
           H+    F+ + KLRFLR +    K  +++L    +G+ PF + +R+LEW   P K+L   
Sbjct: 540 HIQDDTFNLITKLRFLRLHVPLGKKRLTNLYHPDQGIMPFCDKLRYLEWYGYPSKSLPQP 599

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPDELENL 583
            CAE LV +++P + VE LW  +Q L          +  E ID   CK L  LPD     
Sbjct: 600 FCAELLVEIRLPHSHVEHLWYGIQEL----------VNLEGIDLTECKQLVELPD----- 644

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
                           L + + +K L LS   +L  +  S  H   L  L +  C++L+ 
Sbjct: 645 ----------------LSKATRLKWLFLSGCESLSEVHPSTFHNDTLVTLLLDRCKKLEN 688

Query: 644 LPELPCNLGLLSARN-----CTSL 662
              L C   L S +N     C+SL
Sbjct: 689 ---LVCEKHLTSLKNIDVNGCSSL 709



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 47/247 (19%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ELP ++  LS++  L L + SN++ +P +I++LS LT L +++C+ L +LP+LP ++  L
Sbjct: 808  ELPTNIDSLSFLYELRL-DGSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQLPEHIKEL 866

Query: 655  SARNCTSLEKLPAGLSSMS-----SVLYVNLCNFLKLDPNELS---------EIVKDGWM 700
             A NCTSL ++ + L +MS        Y++  N   L+ NELS          ++K   +
Sbjct: 867  RAENCTSLVEV-STLKTMSKHRNGDEKYISFKNGKMLESNELSLNRITEDTILVIKSVAL 925

Query: 701  KHSLYEERGIKKSMY--------FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL--- 749
             + L ++R  +   Y         PG+ IP   ++++  S  T+        G++ +   
Sbjct: 926  YNVLVDKRCSEIHSYNYDSVVVCLPGSRIPSQLKYKTSDSKLTI--------GFSDIYYS 977

Query: 750  ISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL---YSWFLGKISYV 806
            + F F AVVV P+        SG  +  G+   + C   R+    +     W    I+ +
Sbjct: 978  LGFIF-AVVVSPS--------SGMKNERGSGAKIQCKCYREDGSQVGVSSEWHNEVITNL 1028

Query: 807  ESDHVFL 813
            + DHVF+
Sbjct: 1029 DMDHVFV 1035


>gi|297811961|ref|XP_002873864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319701|gb|EFH50123.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 243/739 (32%), Positives = 375/739 (50%), Gaps = 104/739 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R NF SHL   L L+ I  F D  + R  +I   L   I  S I+I++
Sbjct: 19  YHVFPSFCGEDVRKNFLSHLQKELQLRGINAFKDHGIKRSRSIWPELKQAIWESRISIVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YA S W                      FY VDPS VRKQ+ +FG+ F +    R 
Sbjct: 79  LSSNYAGSSWCLDELLEIMECREAVGQTLLTVFYEVDPSDVRKQTGAFGKVFEKTCLGRT 138

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+ +RWK ALT+ A++SG+ S     E+ +IE+I  DV + L+    SK+   LVG+E 
Sbjct: 139 VEETQRWKQALTDVANVSGYCSEKWDNEASMIEKIVADVSEELNCCTPSKDFDDLVGLEA 198

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISR---HFEGSYFALNVREAE 215
            + ++ S+LC+ S  V  + IWG  GI K TIA A++N++S     F+ + F  NV+ + 
Sbjct: 199 HVAKLNSMLCLQSNDVRMIGIWGPIGIGKTTIARALYNQLSSDGDEFQQNLFMENVKRSS 258

Query: 216 ETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------- 260
           +   +        LQ++ LSE+   ++ N+ ++     RL  +K  IV DDV        
Sbjct: 259 KRNKLDGYRLKLHLQERFLSEMFNQRNINISHLGVAQERLKNQKALIVLDDVDDVEQLHA 318

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    +G+RVI+ T DKQ+LK    +  Y +      +A  +FC++AFG       
Sbjct: 319 LADQTQWFGNGTRVIVITEDKQLLKAHGIDHVYDVCLPSKDEAFHIFCRFAFGKTSAPEG 378

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + ++  +  K A  +PL L +LG  L G  K+ W +A+ +L    + +IE++L   YD L
Sbjct: 379 YYDVAVEVAKLAGDLPLGLSILGASLRGMRKDEWINALPRLRTSLNGKIEKLLGACYDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEV-----ISIFDA--------SKSLINLDLFYRIRMHDL 418
           D+  K +FL IAC   GE  D V     IS  DA         +SLI++     I MH L
Sbjct: 439 DEKDKALFLHIACLFNGEKVDRVKELLAISALDAEFGLKVLNDRSLIHICADGYIVMHCL 498

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+ MG+EI R + ++ PGK   +    +I  VL   TGT+ + GISLDM++++ +++++ 
Sbjct: 499 LQQMGKEITRGQCLHDPGKGKFIVDALEISDVLADETGTKTVLGISLDMSEIDGQVYISE 558

Query: 479 YAFSKMPKLRFLRFYG---DKNK--CMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
            AF KMP L+FLR Y    DK     +   L+ +P  ++R L W   P+K +      E 
Sbjct: 559 KAFEKMPNLQFLRLYNSIPDKAAEFDLPHGLDYLP-RKLRLLHWDSYPIKCMPSKFRPEF 617

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT 591
           LV L M  +K+E+LW+ +Q L S                            L+Y+ +  +
Sbjct: 618 LVELTMRDSKLEKLWEGIQPLTS----------------------------LKYMDLSAS 649

Query: 592 T-IRELPESLGRLSWVKRLILSNNSNLERIPES-IRHLSKLTFLFISHCERLQTLPELPC 649
           T I ++P +L R   +++L L    NL  +P S +++L+KL  L +S C +L+TLP    
Sbjct: 650 TNIGDIP-NLSRAKNLEKLYLRFCENLVTVPSSALQNLNKLKVLDMSCCIKLKTLPTNIN 708

Query: 650 --NLGLLSARNCTSLEKLP 666
             +L +L+ R C+ L++ P
Sbjct: 709 LESLSVLNLRGCSKLKRFP 727


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 248/800 (31%), Positives = 378/800 (47%), Gaps = 132/800 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR  FT  L+  L  K ++ F D++ L RGD I + LL  IE S   I 
Sbjct: 21  WDVFLSFRGEDTRGTFTDCLYTRLQHKGVRAFRDNEGLNRGDKIDRCLLDAIEDSAAFIA 80

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK- 102
           I S  YA+SRW                  FY VDPSHVR Q   F +HF  L  RF E+ 
Sbjct: 81  IISPNYANSRWCLEELAKVCECNRLILPVFYNVDPSHVRGQRGPFLQHFKDLEARFGEED 140

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           + +W+ A+     L+GF  N    E+ +I+ + N+VL  L + +       VG++  +EE
Sbjct: 141 VSKWRKAMKYVGGLAGFVVNGFGDEADVIQTLLNNVLAEL-SKWSGVPAFTVGLDSRVEE 199

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIK 221
           +  LL + S  +  L ++G GG+ K T+A A++NK+  HFE   F  NV++   +  G+ 
Sbjct: 200 VLELLDLKSNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYLAQENGLL 259

Query: 222 DLQKKLLSELSKDGNMRN-IESQL----NRLARKKVRIVFDDVTS--------------- 261
            LQ KL+ +LS   +  N + + L    + +  K+V I+ DDV                 
Sbjct: 260 SLQIKLIGDLSGMASHVNEVNAGLVAIKSIVQEKRVLIILDDVDDASQLTAIXGRKKWRK 319

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRD++VL     N+ Y +K+L   ++ +LF  +A G       ++ L+ 
Sbjct: 320 WFYEGSRIIITTRDREVLHELHENELYEVKQLNSPESLQLFSHYALGRVKPTPDYLPLSK 379

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSK-EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           + +    G+PLAL+V G  L  + K E WE A++KL+ I  ++++ VLKISYD LD+ +K
Sbjct: 380 QIVSLTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQIRPMDLQGVLKISYDGLDEQEK 439

Query: 377 NVFLDIACFL--EGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
             FLDIAC     G  +++ I I                 KSL+ +   Y + MHD LRD
Sbjct: 440 CXFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYTLWMHDQLRD 499

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM-------------- 467
           MGR+IV  E+    G R+RLW   +I +VL+ N G+  I+G+ LD               
Sbjct: 500 MGRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIFMKDSAAAWG 559

Query: 468 --------------------------NKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV 501
                                      +  RE+ + + +F  M  LR L+     N  + 
Sbjct: 560 RFRGTPNFTTAVTWLKETYKEYFQHAAEKERELILQTKSFESMINLRLLQI---DNVQLE 616

Query: 502 SHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK-VEQLWDDV--------- 549
              + +P AE++ L+W  CPLKTL  + C + L  L +  +K + +LW            
Sbjct: 617 GEFKLMP-AELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIVRLWGGRWWSWHNNKC 675

Query: 550 ----------QRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIRELPE 598
                     Q  P      + P+    I   +L       ENL  +   G   +  +P+
Sbjct: 676 YQTWYFSHINQSAPDHDMEEQVPLLGFHISPLLLPYQDVVGENLMVMNXHGCCNLTAIPD 735

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLS 655
             G  + +++LIL +   L +I +SI  +  L  L +S C+ L   P       NL  L 
Sbjct: 736 LSGNQA-LEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLXTLI 794

Query: 656 ARNCTSLEKLPAGLSSMSSV 675
              C+ L++LP  +S M S+
Sbjct: 795 LSGCSKLKELPENISYMKSL 814



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 46/282 (16%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+   +LS ++ L L  N N   +P S+R LS L  L + HCE L+ LP LP +L  +
Sbjct: 1131 KIPDDFDKLSSLEILNLGRN-NFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEV 1189

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD--GWMK---HSLYEERG 709
            +A NC +LE + + LS++ S+  +NL N  KL      E +K   G+      S      
Sbjct: 1190 NAANCYALEVI-SDLSNLESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVA 1248

Query: 710  IK--KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF 767
            +K  +++  PG+ IP WF      + A    R       N +I      VVV    L + 
Sbjct: 1249 LKNLRTLSIPGSNIPDWFSR----NVAIFSKRK------NLVIKAVIIGVVV---SLSHH 1295

Query: 768  RHKSGEDDWDG--NVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGP 825
                  D       + A      R+  G +    L  +   + DH++L C          
Sbjct: 1296 IQDELRDQLPSVPGIEAKILRMNRQVFGTMLD--LTGVPKTDEDHLYL-C---------- 1342

Query: 826  NYDEF---------SFRIHCSFHFPPYLERGEVKKCGIHFVY 858
             Y EF           +I  +   PP ++  E+KK GIH ++
Sbjct: 1343 RYREFHPIVSMLKDGDKIQVTMRNPPMVKGVELKKSGIHLIF 1384



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 30/166 (18%)

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSWVKRL 609
           PS +   K   T  +  C  L+ LP+    +++L  L + GT I +LPES+ RL+ ++RL
Sbjct: 781 PSDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERL 840

Query: 610 ILS-----------------------NNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            L+                       N+S LE IP+S   L+ L  L +  C+ +  +P+
Sbjct: 841 SLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPD 900

Query: 647 LPCNLGLLSA--RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDP 688
              NL LL+    N + + +LPA + S+S++  L V  C FL   P
Sbjct: 901 SVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGXCRFLSKLP 946



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 29/251 (11%)

Query: 443  HHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP----KLRFLRFYGDKNK 498
            + K + ++L   T  E +    L + ++ R    N  +  ++P    KL  LR     + 
Sbjct: 810  YMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFND- 868

Query: 499  CMVSHLEGVP--FAEVRHLE---WPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLP 553
               S LE +P  F  + +LE     +C  +++    + + +LK+  T+       V  LP
Sbjct: 869  ---SALEEIPDSFGSLTNLERLSLMRC--QSIYAIPDSVXNLKL-LTEFLMNGSPVNELP 922

Query: 554  SSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLGRLSWVKRLI 610
            +S+ +        +  C+ L +LP  +E L     L + GT+I +LP+ +G L  ++RL 
Sbjct: 923  ASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTSIMDLPDQIGGLKTLRRLE 982

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNCTSLEK 664
            +     LE +PE+I  +  L  L I        + ELP ++G      +L+   C  L +
Sbjct: 983  MRFCKRLESLPEAIGSMGSLNTLIIVDA----PMTELPESIGKLENLIMLNLNKCKRLRR 1038

Query: 665  LPAGLSSMSSV 675
            LP  +  + S+
Sbjct: 1039 LPGSIGXLKSL 1049



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            +  LP S+   +  I   +  CK L RLP     L++L +L ++ T +R+LPES G L+ 
Sbjct: 1012 MTELPESIGKLENLIMLNLNKCKRLRRLPGSIGXLKSLHHLXMEETAVRQLPESFGMLTS 1071

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL---LSARNCTSL 662
            + RL+++   +LE +P+++   ++   L       L  LP    NL L   L AR     
Sbjct: 1072 LMRLLMAKRPHLE-LPQALGP-TETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKIS 1129

Query: 663  EKLPAGLSSMSSVLYVNL 680
             K+P     +SS+  +NL
Sbjct: 1130 GKIPDDFDKLSSLEILNL 1147


>gi|39104607|dbj|BAC43641.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 237/767 (30%), Positives = 381/767 (49%), Gaps = 88/767 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VF SF G D R    SH+    +   I  F D +++R   I  SL+  I+ S I+I+I
Sbjct: 14  FNVFASFHGPDVRKTLLSHIRLQFNRNGITMFDDQKIVRSATIGPSLVEAIKESRISIVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY VDPS VRKQ   FG  F+    ++ 
Sbjct: 74  LSKKYASSSWCLDELVEILECKKAMGQIVMTIFYGVDPSDVRKQIGKFGIAFNETCARKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  AL + ++++G D      E+ +IE+IA DVL +L+AT      G+VG+E  
Sbjct: 134 EEERQKWSKALNQVSNIAGEDFLRWDNEAIMIEKIARDVLDKLNATPSRDFDGMVGIEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + EI+SLL + +  V  + I G  GI K TIA A++  +S+ F+ S F  N+R +  +G 
Sbjct: 194 LREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSYHSGF 253

Query: 219 ---GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----------- 261
              G K  LQ++ LS++     MR  ++ +    L+ ++V I+ DDV             
Sbjct: 254 DEYGFKLHLQEQFLSKVLNQSGMRICHLGAIKENLSDQRVLIILDDVNKLKQLEALANGT 313

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+++TT +K++L+    N  Y +      DA K+ C +AF          EL+
Sbjct: 314 TWFGPGSRIVVTTENKELLQQHGINNTYHVGFPSDEDALKILCSYAFKQTSPRHGFEELS 373

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +   K    +PL L V+G  L G+ ++ WE  + +LE I   +IE+VL++ Y+SLD++ +
Sbjct: 374 ESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETILDQDIEDVLRVGYESLDENAQ 433

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLF----YRIRMHDLL 419
            +FL IA F   E  D V ++F  S             +SLI + +F     +I MH LL
Sbjct: 434 TLFLHIAIFFNKEDGDLVKTMFAESDLDVKYGLKILENRSLIKMKIFSNGDTKIVMHRLL 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNS 478
           + MG+  ++K+    P +R  L   ++I  VL+   GT   + G+S D+++++ E+ +  
Sbjct: 494 QQMGKRAIQKQ---EPWERQILIDAREICHVLEHAKGTGWNVHGMSFDISRIS-EVSIRK 549

Query: 479 YAFSKMPKLRFLRFYGDK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            AF +MP L+FL+ Y  K    N+  V      P   +R L+W   P K+L      E L
Sbjct: 550 KAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDFP-CLLRLLDWKAYPSKSLPPTFNPEHL 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L M  +++E LW   Q L       K     ++   K L++LPD     NLEYL + G
Sbjct: 609 VELNMHSSQLEYLWQGTQPL-------KNLKKMDLSQSKNLKQLPDLSNATNLEYLYLMG 661

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ E+P S+  L  ++ L      NLE IP  + +L  L  +++  C RL+ +P +  
Sbjct: 662 CESLIEIPSSISHLHKLEMLATVGCINLEVIPAHM-NLESLQTVYLGGCSRLRNIPVMST 720

Query: 650 NLGLLSARNCTSLEKLP--AGLSSMSSVLYVNLCNFLKLDPNELSEI 694
           N+  L   N T++E +P   GL ++      N    L   P  L+ +
Sbjct: 721 NIRYLFITN-TAVEGVPLCPGLKTLDVSGSRNFKGLLTHLPTSLTTL 766


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 256/812 (31%), Positives = 388/812 (47%), Gaps = 155/812 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            Y+VFLSFRG+DTR NFT HL+  L  K I+TF  D   +G+ I  + L  +E S   ++I
Sbjct: 251  YEVFLSFRGQDTRQNFTDHLYAALYQKGIRTFRMDH-TKGEMILPTTLRAVEMSRCFLVI 309

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
             S+ YA S+W                      FY V+PS VR Q  S+G   +   ++ P
Sbjct: 310  LSKNYAHSKWCLDELNQIMESRRQMGKIVFPVFYHVNPSDVRNQGESYGEALANHERKIP 369

Query: 101  -EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             E  ++ + AL E  +LSG+   N    ES  I +I   +L +        +K L+G++ 
Sbjct: 370  LEYTQKLRAALREVGNLSGWHIQNGF--ESDFIXDITRVILMKFSQKLLQVDKNLIGMDY 427

Query: 159  SIEEIE----SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
             +E++E     ++   S  V  + I+G GGI K T+A  ++N+I   F  + F  NVRE 
Sbjct: 428  RLEDMEEIFPQIIDPLSNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 487

Query: 215  EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDVT-------- 260
             ++ G+  LQK+LL + L K  N +RN++  +    +RL  KKV +V DDV         
Sbjct: 488  SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEAL 547

Query: 261  --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     GSR+I+TTRDK +L+    +  Y  K+L + +A +LFC  AF  +H    +
Sbjct: 548  AGDHNWFGPGSRIIVTTRDKHLLEVHEXDALYEAKKLDHKEAVELFCWNAFKQNHPKEDY 607

Query: 313  IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
              L++  + Y  G+PL LKVLGC+L G++   WES ++KL+  P+ EI+ VLK SYD LD
Sbjct: 608  ETLSNSVVHYVNGLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRVLKRSYDVLD 667

Query: 373  DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
             +Q+ +FLD+ACF  GE +D V    DA              K  I + L  +I MHDLL
Sbjct: 668  YTQQQIFLDVACFFNGEDKDFVTRFLDACNFYAESGIGVLGDKCFITI-LDNKIWMHDLL 726

Query: 420  RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            + MGR+IVR+E    PGK +RL + + + +VL +                  + +  N+ 
Sbjct: 727  QQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTR------------------KXVRTNAN 768

Query: 480  AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
              + M K     F  + NK  +S     P  E+R+L W   PL++L     AE LV L M
Sbjct: 769  ESTFMXKDLEXAFTREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPXXFYAEDLVELDM 828

Query: 538  PCTKVEQLWD------------------------------DVQRLPSSLCT--------- 558
              + +++LW+                              ++Q+L    C+         
Sbjct: 829  CYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLQKLILDGCSSLLEVHPSI 888

Query: 559  -------------FKTPITF-EIIDCKMLE-----------RLPD---ELENLEYLTVKG 590
                          K  I F  IID K LE           + P+    +ENL  L +  
Sbjct: 889  GKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLFELYLAS 948

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
            T I ELP S+G L+ +  L L    NL+ +P SI  L  L  L +S C +L + PE+  N
Sbjct: 949  TAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSKLGSFPEVTEN 1008

Query: 651  LGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
            +  L     + T +E LP+ +  +  ++ +NL
Sbjct: 1009 MDKLKELLLDGTPIEVLPSSIDRLKGLVLLNL 1040



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 100/205 (48%), Gaps = 49/205 (23%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDTR NFT HL+  L  K I+TF D  +L RG+ I+  LL  IE S I +I
Sbjct: 27  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHKELRRGEEIATELLKAIEESRICVI 86

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA SRW                      FY+VDPS+VRKQ   +G   +   +  
Sbjct: 87  ILSKNYARSRWCLDELVKIMEWKQCMGQLVFPIFYQVDPSNVRKQMGCYGEALADHERNA 146

Query: 100 PE----KMKRWKNALTEAADLSG-----------------FDSNVI------RPESKLIE 132
            E    K+KRW+ AL   A +SG                  DS  +      RPE+ +IE
Sbjct: 147 GEEGMSKIKRWREALWNVAKISGCIYDPEHLIHVLLMFATIDSPHVSCFATCRPEAHVIE 206

Query: 133 EIANDVLKRLDATFQSKNKGLVGVE 157
           +I + V K L+       K LVG++
Sbjct: 207 DITSTVWKVLNRELLHVEKNLVGMD 231



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 145/343 (42%), Gaps = 76/343 (22%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPSS  +F++    ++ DCK++E                     +P  +  L  +K+L 
Sbjct: 1142 RLPSSFSSFRSLSNLDLSDCKLIEG-------------------AIPNGICSLISLKKLD 1182

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N N   IP  I  L+ L  L +  C+ L  +PELP +L  + A NCT+L  LP G S
Sbjct: 1183 LSQN-NFLSIPAGISELTNLEDLRLGQCQSLTGIPELPLSLRDIDAHNCTAL--LP-GSS 1238

Query: 671  SMSSVLYVNLCNF-----------------LKLDPN-------ELSEIVKDGWMKHSLYE 706
            S+S++  +    +                 L+L P+         S +     M   L E
Sbjct: 1239 SVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQLFPHIYVSSTASDSSVTTSPVMMQKLLE 1298

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLK 765
               I  S+ FPG  IP+W  HQ++GSS  +K + P     +  + FA C+V+   P  + 
Sbjct: 1299 --NIAFSIVFPGTGIPEWIWHQNVGSS--IKIQLPTDWYSDDFLGFALCSVLEHLPERII 1354

Query: 766  YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEY 822
               +    D  D            K  GH + W  G I  V S+HV+LG   C+      
Sbjct: 1355 CHLNSDVFDYGD-----------LKDFGHDFHW-TGDI--VGSEHVWLGYQPCSQLRLFQ 1400

Query: 823  FGP----NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            F      N+ E SF     F+         VKKCG+  +YA+D
Sbjct: 1401 FNDPNEWNHIEISFEAAHRFNSSA---SNVVKKCGVCLIYAED 1440



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 15/150 (10%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYL 586
            E L  L +  T +E+L       PSS+      +  ++  CK L+ LP    +L++LE L
Sbjct: 939  ENLFELYLASTAIEEL-------PSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENL 991

Query: 587  TVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            ++ G + +   PE    +  +K L+L + + +E +P SI  L  L  L +  C+ L +L 
Sbjct: 992  SLSGCSKLGSFPEVTENMDKLKELLL-DGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLS 1050

Query: 646  ELPCNLG---LLSARNCTSLEKLPAGLSSM 672
               CNL     L    C+ L  LP  L S+
Sbjct: 1051 NGMCNLTSLETLVVSGCSQLNNLPRNLGSL 1080


>gi|15222558|ref|NP_176572.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325006|gb|AAG52448.1|AC010852_5 putative disease resistance protein; 24665-28198 [Arabidopsis
           thaliana]
 gi|332196042|gb|AEE34163.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 237/767 (30%), Positives = 381/767 (49%), Gaps = 88/767 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           ++VF SF G D R    SH+    +   I  F D +++R   I  SL+  I+ S I+I+I
Sbjct: 14  FNVFASFHGPDVRKTLLSHIRLQFNRNGITMFDDQKIVRSATIGPSLVEAIKESRISIVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY VDPS VRKQ   FG  F+    ++ 
Sbjct: 74  LSKKYASSSWCLDELVEILECKKAMGQIVMTIFYGVDPSDVRKQIGKFGIAFNETCARKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  AL + ++++G D      E+ +IE+IA DVL +L+AT      G+VG+E  
Sbjct: 134 EEERQKWSKALNQVSNIAGEDFLRWDNEAIMIEKIARDVLDKLNATPSRDFDGMVGIEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + EI+SLL + +  V  + I G  GI K TIA A++  +S+ F+ S F  N+R +  +G 
Sbjct: 194 LREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSYHSGF 253

Query: 219 ---GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----------- 261
              G K  LQ++ LS++     MR  ++ +    L+ ++V I+ DDV             
Sbjct: 254 DEYGFKLHLQEQFLSKVLNQSGMRICHLGAIKENLSDQRVLIILDDVNKLKQLEALANET 313

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+++TT +K++L+    N  Y +      DA K+ C +AF          EL+
Sbjct: 314 TWFGPGSRIVVTTENKELLQQHGINNTYHVGFPSDEDALKILCSYAFKQTSPRHGFEELS 373

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +   K    +PL L V+G  L G+ ++ WE  + +LE I   +IE+VL++ Y+SLD++ +
Sbjct: 374 ESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETILDQDIEDVLRVGYESLDENAQ 433

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLF----YRIRMHDLL 419
            +FL IA F   E  D V ++F  S             +SLI + +F     +I MH LL
Sbjct: 434 TLFLHIAIFFNKEDGDLVKTMFAESDLDVKYGLKILENRSLIKMKIFSNGDTKIVMHRLL 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNS 478
           + MG+  ++K+    P +R  L   ++I  VL+   GT   + G+S D+++++ E+ +  
Sbjct: 494 QQMGKRAIQKQ---EPWERQILIDAREICHVLEHAKGTGWNVHGMSFDISRIS-EVSIRK 549

Query: 479 YAFSKMPKLRFLRFYGDK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            AF +MP L+FL+ Y  K    N+  V      P   +R L+W   P K+L      E L
Sbjct: 550 KAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDFP-CLLRLLDWKAYPSKSLPPTFNPEHL 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L M  +++E LW   Q L       K     ++   K L++LPD     NLEYL + G
Sbjct: 609 VELNMHSSQLEYLWQGTQPL-------KNLKKMDLSQSKNLKQLPDLSNATNLEYLYLMG 661

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ E+P S+  L  ++ L      NLE IP  + +L  L  +++  C RL+ +P +  
Sbjct: 662 CESLIEIPSSISHLHKLEMLATVGCINLEVIPAHM-NLESLQTVYLGGCSRLRNIPVMST 720

Query: 650 NLGLLSARNCTSLEKLP--AGLSSMSSVLYVNLCNFLKLDPNELSEI 694
           N+  L   N T++E +P   GL ++      N    L   P  L+ +
Sbjct: 721 NIRYLFITN-TAVEGVPLCPGLKTLDVSGSRNFKGLLTHLPTSLTTL 766


>gi|451798986|gb|AGF69191.1| TMV resistance protein N-like protein 5 [Vitis labrusca]
          Length = 587

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 216/557 (38%), Positives = 310/557 (55%), Gaps = 70/557 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I +F DD+ L +G +I+  LL  IE S I II
Sbjct: 19  YDVFLSFRGGDTRKNFTDHLYTTLTAYGIHSFKDDEELEKGGDIASDLLRAIEESRIFII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           IFS+ YA SRW                      FY VDPS VR Q  SFG     H    
Sbjct: 79  IFSKNYAYSRWCLNELVKIIERKSQKESLVLPIFYHVDPSDVRNQKGSFGDALACHERDA 138

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   E +++W+ AL +AA+L G   +  + E+++++EI N +++RL+    S  K +V 
Sbjct: 139 NQEKKEMVQKWRIALRKAANLCGCHVDD-QYETEVVKEIVNTIIRRLNHQPLSVGKNIVS 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           V   +E+++SL+      V  + I GIGG+ K TIA A++N+IS  ++GS F  N+RE  
Sbjct: 198 VH--LEKLKSLMNTNLNKVSVVGICGIGGVGKTTIAKAIYNEISYQYDGSSFLKNIRERS 255

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT--------- 260
           + G I  LQ++LL  + K  N +  NI+  ++ + R     +V ++FDDV          
Sbjct: 256 K-GDILQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLA 314

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDKQVL     +  Y + +L   +A ++F  WAF  +     + 
Sbjct: 315 EEKDWFEAKSTIIITSRDKQVLAQYGVDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVYK 374

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKVLG  L G+++  WESA+ KL+ IPH+EI  VL+IS+D LDD
Sbjct: 375 NLSYNIIDYANGLPLALKVLGGSLFGKTRSEWESALCKLKTIPHMEIHNVLRISFDGLDD 434

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--ASKSLINLD---LFY----RIRMHDLLRDMGR 424
             K +FLD+ACF +G  +D V  I    A   +  LD   L       + MHDL++ MG 
Sbjct: 435 VDKGIFLDVACFFKGNDKDYVSRILGPYAEYGITTLDDRCLLTISKNMLDMHDLIQQMGW 494

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKN-----TGTEAIEGISLDMNKVNREIHMNSY 479
           EI+R+E + + G+R+RLW   D Y VL +N      G +AIEG+ LD  K N   H+N  
Sbjct: 495 EIIRQECLENLGRRSRLW-DSDAYHVLTRNMSYIFQGAQAIEGLFLDRCKFNPS-HLNRE 552

Query: 480 AFSKMPKLRFL--RFYG 494
           +F +M +LR L  R YG
Sbjct: 553 SFKEMNRLRLLKIRSYG 569


>gi|12322541|gb|AAG51270.1|AC027135_11 disease resistance gene, putative [Arabidopsis thaliana]
          Length = 1198

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 370/742 (49%), Gaps = 87/742 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP-- 100
           +FS+ YASS W                   FY VDPS VR Q   FG+ F    KR    
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIVIPVFYHVDPSQVRHQIGDFGKIFENTCKRQTDE 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E   +WK ALT  A++ GFDS     E+K+IEEIANDVL +L  T    ++ LVG+E  I
Sbjct: 131 EVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGKLLLTTPKDSEELVGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA----LNVREAEE 216
            E+  LL + S+ V  + I G  GI K TIA A+F ++SRHF+GS F     ++      
Sbjct: 191 AEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIY 250

Query: 217 TGGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKV---------RIVFDD 258
           +G   D       LQ   LSE+   KD  + +  +   RL  +KV          +V D 
Sbjct: 251 SGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERLKHQKVLIIIDDLDDIMVLDT 310

Query: 259 VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           +         GSR+I+ T DK  L     +  Y +       A ++ CQ AF  ++    
Sbjct: 311 LVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSAFKQNYAPKG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--IEEVLKISYD 369
             +L    +++A   PL L +LG YL  R  E W   + +LE    ++  IE++L+ISYD
Sbjct: 371 FEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKIEKILRISYD 430

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDL 418
            L+   + +F  IAC         + S+             A KSLI++   Y + MH  
Sbjct: 431 GLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGY-VVMHRS 489

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGR+IVR +SI+ PG+R  L    DI+ +L   TGT+ + GISLD+  + RE+ ++ 
Sbjct: 490 LQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNI-RELDVHE 548

Query: 479 YAFSKMPKLRFLRF--YGDKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAE 530
            AF  M  LRFL    +G K   +  HL    + +P   ++ L W + P++ +      E
Sbjct: 549 RAFKGMSNLRFLEIKNFGLKEDGL--HLPPSFDYLP-RTLKLLCWSKFPMRCMPFGFRPE 605

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L+M  +K+ +LW+ V    + L   K     ++     L+ +PD  E  NLE L +
Sbjct: 606 NLVKLEMQYSKLHKLWEGV----APLTCLK---EMDLHGSSNLKVIPDLSEATNLEILNL 658

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K   ++ ELP S+  L+ +  L + N  +L+ +P    +L  L  L + HC +L+T P+ 
Sbjct: 659 KFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGF-NLKSLDRLNLYHCSKLKTFPKF 717

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+ +L+  N T++E  P+ L
Sbjct: 718 STNISVLNL-NLTNIEDFPSNL 738



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 23/163 (14%)

Query: 526 NICAEKLVSLKMPCTKV-EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
           N+  E LV  ++   +  E+ W++ + L   L    +P    +     LE LP       
Sbjct: 737 NLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLTSL----HLENLP------- 785

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                  ++ EL  S   L+ +K LI+ N  NLE +P  I +L  L +L  S C +L++ 
Sbjct: 786 -------SLVELTSSFQNLNQLKDLIIINCINLETLPTGI-NLQSLDYLCFSGCSQLRSF 837

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLK 685
           PE+  N+ +L     T++E++P  +   S++  L +N C+ LK
Sbjct: 838 PEISTNISVLYLDE-TAIEEVPWWIEKFSNLTELSMNSCSRLK 879


>gi|186479099|ref|NP_001117396.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332193249|gb|AEE31370.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1161

 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 370/742 (49%), Gaps = 87/742 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP-- 100
           +FS+ YASS W                   FY VDPS VR Q   FG+ F    KR    
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIVIPVFYHVDPSQVRHQIGDFGKIFENTCKRQTDE 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E   +WK ALT  A++ GFDS     E+K+IEEIANDVL +L  T    ++ LVG+E  I
Sbjct: 131 EVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGKLLLTTPKDSEELVGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA----LNVREAEE 216
            E+  LL + S+ V  + I G  GI K TIA A+F ++SRHF+GS F     ++      
Sbjct: 191 AEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIY 250

Query: 217 TGGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKV---------RIVFDD 258
           +G   D       LQ   LSE+   KD  + +  +   RL  +KV          +V D 
Sbjct: 251 SGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERLKHQKVLIIIDDLDDIMVLDT 310

Query: 259 VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           +         GSR+I+ T DK  L     +  Y +       A ++ CQ AF  ++    
Sbjct: 311 LVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSAFKQNYAPKG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--IEEVLKISYD 369
             +L    +++A   PL L +LG YL  R  E W   + +LE    ++  IE++L+ISYD
Sbjct: 371 FEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKIEKILRISYD 430

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDL 418
            L+   + +F  IAC         + S+             A KSLI++   Y + MH  
Sbjct: 431 GLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGY-VVMHRS 489

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGR+IVR +SI+ PG+R  L    DI+ +L   TGT+ + GISLD+  + RE+ ++ 
Sbjct: 490 LQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNI-RELDVHE 548

Query: 479 YAFSKMPKLRFLRF--YGDKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAE 530
            AF  M  LRFL    +G K   +  HL    + +P   ++ L W + P++ +      E
Sbjct: 549 RAFKGMSNLRFLEIKNFGLKEDGL--HLPPSFDYLP-RTLKLLCWSKFPMRCMPFGFRPE 605

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L+M  +K+ +LW+ V    + L   K     ++     L+ +PD  E  NLE L +
Sbjct: 606 NLVKLEMQYSKLHKLWEGV----APLTCLK---EMDLHGSSNLKVIPDLSEATNLEILNL 658

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K   ++ ELP S+  L+ +  L + N  +L+ +P    +L  L  L + HC +L+T P+ 
Sbjct: 659 KFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGF-NLKSLDRLNLYHCSKLKTFPKF 717

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+ +L+  N T++E  P+ L
Sbjct: 718 STNISVLNL-NLTNIEDFPSNL 738



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 23/163 (14%)

Query: 526 NICAEKLVSLKMPCTKV-EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
           N+  E LV  ++   +  E+ W++ + L   L    +P    +     LE LP       
Sbjct: 737 NLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLTSL----HLENLP------- 785

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                  ++ EL  S   L+ +K LI+ N  NLE +P  I +L  L +L  S C +L++ 
Sbjct: 786 -------SLVELTSSFQNLNQLKDLIIINCINLETLPTGI-NLQSLDYLCFSGCSQLRSF 837

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLK 685
           PE+  N+ +L     T++E++P  +   S++  L +N C+ LK
Sbjct: 838 PEISTNISVLYLDE-TAIEEVPWWIEKFSNLTELSMNSCSRLK 879


>gi|12597847|gb|AAG60157.1|AC074360_22 downy mildew resistance protein RPP5, putative [Arabidopsis
           thaliana]
          Length = 1202

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 370/742 (49%), Gaps = 87/742 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP-- 100
           +FS+ YASS W                   FY VDPS VR Q   FG+ F    KR    
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIVIPVFYHVDPSQVRHQIGDFGKIFENTCKRQTDE 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E   +WK ALT  A++ GFDS     E+K+IEEIANDVL +L  T    ++ LVG+E  I
Sbjct: 131 EVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGKLLLTTPKDSEELVGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA----LNVREAEE 216
            E+  LL + S+ V  + I G  GI K TIA A+F ++SRHF+GS F     ++      
Sbjct: 191 AEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIY 250

Query: 217 TGGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKV---------RIVFDD 258
           +G   D       LQ   LSE+   KD  + +  +   RL  +KV          +V D 
Sbjct: 251 SGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERLKHQKVLIIIDDLDDIMVLDT 310

Query: 259 VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           +         GSR+I+ T DK  L     +  Y +       A ++ CQ AF  ++    
Sbjct: 311 LVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSAFKQNYAPKG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--IEEVLKISYD 369
             +L    +++A   PL L +LG YL  R  E W   + +LE    ++  IE++L+ISYD
Sbjct: 371 FEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKIEKILRISYD 430

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDL 418
            L+   + +F  IAC         + S+             A KSLI++   Y + MH  
Sbjct: 431 GLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGY-VVMHRS 489

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGR+IVR +SI+ PG+R  L    DI+ +L   TGT+ + GISLD+  + RE+ ++ 
Sbjct: 490 LQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNI-RELDVHE 548

Query: 479 YAFSKMPKLRFLRF--YGDKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAE 530
            AF  M  LRFL    +G K   +  HL    + +P   ++ L W + P++ +      E
Sbjct: 549 RAFKGMSNLRFLEIKNFGLKEDGL--HLPPSFDYLP-RTLKLLCWSKFPMRCMPFGFRPE 605

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L+M  +K+ +LW+ V    + L   K     ++     L+ +PD  E  NLE L +
Sbjct: 606 NLVKLEMQYSKLHKLWEGV----APLTCLK---EMDLHGSSNLKVIPDLSEATNLEILNL 658

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K   ++ ELP S+  L+ +  L + N  +L+ +P    +L  L  L + HC +L+T P+ 
Sbjct: 659 KFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGF-NLKSLDRLNLYHCSKLKTFPKF 717

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+ +L+  N T++E  P+ L
Sbjct: 718 STNISVLNL-NLTNIEDFPSNL 738



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 23/163 (14%)

Query: 526 NICAEKLVSLKMPCTKV-EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
           N+  E LV  ++   +  E+ W++ + L   L    +P    +     LE LP       
Sbjct: 737 NLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLTSL----HLENLP------- 785

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                  ++ EL  S   L+ +K LI+ N  NLE +P  I +L  L +L  S C +L++ 
Sbjct: 786 -------SLVELTSSFQNLNQLKDLIIINCINLETLPTGI-NLQSLDYLCFSGCSQLRSF 837

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLK 685
           PE+  N+ +L     T++E++P  +   S++  L +N C+ LK
Sbjct: 838 PEISTNISVLYLDE-TAIEEVPWWIEKFSNLTELSMNSCSRLK 879


>gi|22329895|ref|NP_174439.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|20466614|gb|AAM20624.1| disease resistance gene, putative [Arabidopsis thaliana]
 gi|34098813|gb|AAQ56789.1| At1g31540 [Arabidopsis thaliana]
 gi|332193248|gb|AEE31369.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 776

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 370/742 (49%), Gaps = 87/742 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKESRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP-- 100
           +FS+ YASS W                   FY VDPS VR Q   FG+ F    KR    
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIVIPVFYHVDPSQVRHQIGDFGKIFENTCKRQTDE 130

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E   +WK ALT  A++ GFDS     E+K+IEEIANDVL +L  T    ++ LVG+E  I
Sbjct: 131 EVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGKLLLTTPKDSEELVGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA----LNVREAEE 216
            E+  LL + S+ V  + I G  GI K TIA A+F ++SRHF+GS F     ++      
Sbjct: 191 AEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIY 250

Query: 217 TGGIKD-------LQKKLLSEL--SKDGNMRNIESQLNRLARKKV---------RIVFDD 258
           +G   D       LQ   LSE+   KD  + +  +   RL  +KV          +V D 
Sbjct: 251 SGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERLKHQKVLIIIDDLDDIMVLDT 310

Query: 259 VTS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
           +         GSR+I+ T DK  L     +  Y +       A ++ CQ AF  ++    
Sbjct: 311 LVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSAFKQNYAPKG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--IEEVLKISYD 369
             +L    +++A   PL L +LG YL  R  E W   + +LE    ++  IE++L+ISYD
Sbjct: 371 FEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKIEKILRISYD 430

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRIRMHDL 418
            L+   + +F  IAC         + S+             A KSLI++   Y + MH  
Sbjct: 431 GLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGY-VVMHRS 489

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGR+IVR +SI+ PG+R  L    DI+ +L   TGT+ + GISLD+  + RE+ ++ 
Sbjct: 490 LQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNI-RELDVHE 548

Query: 479 YAFSKMPKLRFLRF--YGDKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICAE 530
            AF  M  LRFL    +G K   +  HL    + +P   ++ L W + P++ +      E
Sbjct: 549 RAFKGMSNLRFLEIKNFGLKEDGL--HLPPSFDYLP-RTLKLLCWSKFPMRCMPFGFRPE 605

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L+M  +K+ +LW+ V    + L   K     ++     L+ +PD  E  NLE L +
Sbjct: 606 NLVKLEMQYSKLHKLWEGV----APLTCLK---EMDLHGSSNLKVIPDLSEATNLEILNL 658

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K   ++ ELP S+  L+ +  L + N  +L+ +P    +L  L  L + HC +L+T P+ 
Sbjct: 659 KFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGF-NLKSLDRLNLYHCSKLKTFPKF 717

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+ +L+  N T++E  P+ L
Sbjct: 718 STNISVLNL-NLTNIEDFPSNL 738


>gi|255542420|ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223548234|gb|EEF49725.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 251/800 (31%), Positives = 379/800 (47%), Gaps = 152/800 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           Y VFLSF G+DT  NF+ HL+  L    I TF  D  + RG+ +       ++ S + ++
Sbjct: 11  YRVFLSFSGDDTGKNFSDHLYAALEHSGIHTFRGDYGVERGEIVDAEFQKAMQQSKLCLV 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKR 98
           +FS+ YASS W                      FY  DP+ V +QS S+ + F+      
Sbjct: 71  VFSKDYASSIWCLEELVKIMEVRKNGGLIVMPVFYDADPNQVWEQSGSYAKAFAIHEEME 130

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVE 157
             EK++RW+  L E  DLSG D    R E++ I++I   V  RL+ +        LVG++
Sbjct: 131 EMEKVQRWRAVLREITDLSGMDLQQ-RHEAEFIQDIVKLVENRLNESVSMHVPSFLVGID 189

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EE 216
             +++I   L  GS       I+GIGG+ K TIA  V+N     F+GS F  NVR+A +E
Sbjct: 190 SRVKDINLWLQDGSTDPGIAIIYGIGGVGKTTIAKTVYNLNLDRFKGSCFLANVRKASKE 249

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVT--------- 260
             G+  LQK+L+ +  ++G    I+S        ++ ++ K+V IV DDV          
Sbjct: 250 PNGLIFLQKQLVEKF-RNGKENKIDSVDEGSIKVIDVISCKRVLIVLDDVDELDQLNAFI 308

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS++I+TTR +++L      KK+R+KEL   D+ +LF   AF  +H    + 
Sbjct: 309 GTWNSLFQGSKIIVTTRHERLLNPHDTQKKFRVKELDDNDSLQLFSWHAFRQNHPIEGYK 368

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-D 372
           E ++  +K+  GVPLAL+VLG YL  +  + WES + KL+ IPH +I++ L+ISYDSL D
Sbjct: 369 EHSESVVKHCCGVPLALEVLGSYLSDKMADEWESELEKLKAIPHPKIQKSLQISYDSLQD 428

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D  KN+FL IACF  G  +D V+ + D               + L+ ++   ++ MH LL
Sbjct: 429 DKYKNLFLHIACFFTGRDKDYVVKVLDGCELYAKVGIQNLIDRHLVTINKDNKLMMHPLL 488

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--------- 470
           RDMGREIVR+ES  HPG R+RLWHH+D   VL++N GTEAI G++LD+  +         
Sbjct: 489 RDMGREIVRQESPEHPGSRSRLWHHEDTLTVLRENIGTEAIRGLTLDLQIIMQEQQHSIS 548

Query: 471 ------------------------------------------NREIHMNSYAFSKMPKLR 488
                                                     + E+   + AF+KM +L+
Sbjct: 549 CINCAKRQHYEDLISKYREKRSRLGFFSWQPAEVGLIPPFPMSNEVVFETKAFAKMRQLK 608

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT--LNICAEKLVSLKMPCTKVEQLW 546
            L+    K      H        +  L W   P+K+  L +C E LV L M  + ++  W
Sbjct: 609 LLQLNYVKLDGRYEHFP----RNLIWLCWHGFPVKSIPLKLCLENLVVLDMRYSNLKHAW 664

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
              + L   L       ++ ++    L  LP    NLE L +K                 
Sbjct: 665 IGARGL-KQLKILDFSHSYGLVSTPDLSGLP----NLERLKLKSCI-------------- 705

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE---LPCNLGLLSARNCTSLE 663
                    NL  + +SI +L KL  L +  C+RL+ LP    L  +L  L    C+ L+
Sbjct: 706 ---------NLVEVHKSIENLEKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGCSELD 756

Query: 664 KLPAGLSSMSSVLYVNLCNF 683
           KL + L  M S+  +++  F
Sbjct: 757 KLSSELRKMESLKVLHMDGF 776



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 39/210 (18%)

Query: 582  NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            +L++L++    + +    L  LS +K L LS NS +  +P++I  L+KL  L + +C  L
Sbjct: 810  SLDHLSLADCDLSDDTVDLSCLSSLKCLNLSGNS-ISCLPKTISGLTKLESLVLDNCRSL 868

Query: 642  QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC---------NFLKLDP---- 688
            Q+L ELP +L  L+A NCTSLE++   L ++ + L +NL           F KL+P    
Sbjct: 869  QSLSELPASLRELNAENCTSLERI-TNLPNLMTSLRLNLAGCEQLVEVQGFFKLEPINNH 927

Query: 689  -NELS----------------EIVKDGWMKHSLYEERGIKK----SMYFPGNEIPKWFRH 727
              E++                E+     M   +   + + +    S++ PG+E+P W+  
Sbjct: 928  DKEMANMLGLFNLGPVETIKVEMFSVMTMTSRITPPKVLHECGICSIFLPGSEVPGWYSP 987

Query: 728  QSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
            Q+ G   +  T P  P+   K+     C V
Sbjct: 988  QNEGPLISF-TMP--PSHVRKVCGLNICIV 1014


>gi|105922468|gb|ABF81418.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 581

 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 192/510 (37%), Positives = 279/510 (54%), Gaps = 67/510 (13%)

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQKKLLSELSKDGNMRNI 240
           +GGI K TIA AVFN IS  +E   F  NVRE +EE GG+  L+++ LS + +  N+R  
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 241 ESQLN------RLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNC 278
             ++       R+  KKV  V DDV+                 GSR+++T+RD+QVLKN 
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLKNV 120

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
            A++ Y ++EL  ++A +LF    F G+H+   +  L+ +A+ YA+G PLALKVLG +L 
Sbjct: 121 -ADEIYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGSFLF 179

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
            + KE WE+A+ KLE  P ++I  +LK+S+D+L D +KN+FLDIACF +G+  D V  I 
Sbjct: 180 DQRKEDWENALNKLERNPQLKIYNMLKVSFDALGDEEKNIFLDIACFFKGKQIDYVKRIL 239

Query: 399 DASKSLINLDLFY------------RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
           D      N+ +F+            ++ MHDLL++M  EIVR+ESI   GKR+RLW  +D
Sbjct: 240 DGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRLWSPRD 299

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY----GDKNKCMVS 502
           + QVL KN GTE +EGI  D +K+ +EI ++S AF++M  LR L+ Y    G   K  + 
Sbjct: 300 VNQVLTKNLGTEKVEGIFFDTSKI-KEIKLSSKAFARMYNLRLLKIYNSEVGKNCKVYLP 358

Query: 503 HLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK 560
           H       E+R+L W   PLK+L  N   E LV L +  +KV +LW   Q  P +     
Sbjct: 359 HGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKVRELWKGDQMYPETT---- 414

Query: 561 TPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERI 620
                               E++ YL    T I+ELP+S+G  S +  L L     L  +
Sbjct: 415 --------------------EHVMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLGNL 454

Query: 621 PESIRHLSKLTFLFISHCERLQTLPELPCN 650
           PESI  L  +  + +S C  +   P +P N
Sbjct: 455 PESICLLKSIVIVDVSGCSNVTKFPNIPGN 484


>gi|357469227|ref|XP_003604898.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505953|gb|AES87095.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1191

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 211/593 (35%), Positives = 311/593 (52%), Gaps = 54/593 (9%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
            +YDVFLSFRGED+R  F SHL   L  + I  F DD  I RGD IS SLL  I  S I+I
Sbjct: 593  VYDVFLSFRGEDSRAKFMSHLFSSLQNEGIHAFKDDNEIQRGDQISISLLRAIGQSRISI 652

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            I+ S  YA+SRW                      FY V PS VR Q   FG+ F +L  +
Sbjct: 653  IVLSTNYANSRWCMLELEKIMEIGRTKGLIVVPVFYEVAPSEVRDQKGRFGKAFKKLISK 712

Query: 99   FP---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                  K   W+  L +   ++GF     R ES  I+ I   V   LD T     +  VG
Sbjct: 713  ISMDESKKSNWRRDLFDIGGIAGFVLLGSRNESADIKNIVERVTHLLDRTKLFVAEHPVG 772

Query: 156  VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
            +E  ++ +  LL I    V  L IWG+GG  K TIA A++N+I   FEG  F L VRE  
Sbjct: 773  LESRVDTVIKLLNIKKSDVLLLGIWGMGGTGKTTIAKAIYNQIGSKFEGMSFLLGVREFW 832

Query: 216  ET-GGIKDLQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDK 272
            ET   +  LQ+++L ++ K     + +IES    L ++  +   +   SGSR+IITTRD 
Sbjct: 833  ETHTNLVSLQQQVLCDVYKTTTSKIHDIESGKIILKQRLAQKSREWFGSGSRIIITTRDM 892

Query: 273  QVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKV 332
            ++L++C  ++ Y +KE+  +++ +LF   AF            +   I Y+  +PLAL+V
Sbjct: 893  RLLRSC--DQLYAIKEMDESESLELFSWHAFKLPSPPIDFATHSTDVIAYSGRLPLALEV 950

Query: 333  LGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD-SQKNVFLDIACFLEGEHR 391
            LG YL       W+  + KL+ IPH ++++ L++S+D L D +++ +FLDIACF  G  +
Sbjct: 951  LGSYLSDCEITEWQKVLEKLKCIPHDQVQKKLRVSFDGLKDVTEQQIFLDIACFFIGMDQ 1010

Query: 392  DEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR 438
            ++VI I +               +SL+ +D   ++R+HDLLRDMGR+I+ +ES   P  R
Sbjct: 1011 NDVIQILNGCGFFADSGMKILLERSLVTVDNGNKLRVHDLLRDMGRQIIYEESPLDPENR 1070

Query: 439  NRLWHHKDIYQVLKKNT---GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD 495
            +RLW   ++  +L  ++   G EA++G++L   K N  + +NS AF KM KLR L+  G 
Sbjct: 1071 SRLWRSDEVIDMLYNDSNLKGAEAVKGLALKFPKENL-VRLNSNAFQKMYKLRLLQLAGV 1129

Query: 496  KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
            K K    HL       +R L W   PL  +      E LV++++  + + Q W
Sbjct: 1130 KLKGDFKHLS----RNLRWLYWHGFPLTYIPAEFQQESLVAIELKYSNLTQTW 1178



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 181/358 (50%), Gaps = 49/358 (13%)

Query: 116 LSGFDSNVIRPESKLIEEIANDVLKRLDA--TFQSK--NKGLVGVECSIEEIESLLCIGS 171
           L+ ++ + +   ++ I E  + VLK+ D+   F +K  N G   V   +++ +S L +G 
Sbjct: 238 LNTYEHDNVHDNNRDIGEHVSRVLKKRDSFSAFYTKSINSGAQDVIQLLKQSKSPLILG- 296

Query: 172 EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL 231
                  IWG+ GI K +I  A+ N+I  +FE   F  N     +      L+++L+  +
Sbjct: 297 -------IWGMPGIGKSSIVHAICNQIGPYFEHMSFLENAEGLWKDKLQVYLEEELIFHI 349

Query: 232 SKDGNMRNIESQLNR-------LARKKVRIVFDDVTS----------------GSRVIIT 268
            +    RNI +   R       L  K+V ++ D+V                  GS++IIT
Sbjct: 350 DEQFE-RNISTTEARRMISKEKLRHKRVLLILDNVDKLDQLKALCGNREWFGRGSKIIIT 408

Query: 269 TRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPL 328
           TRD+ +LK    +  Y +K+L  +++ +LF   AF         +EL+ + + Y+ G+PL
Sbjct: 409 TRDRHLLKKHGVDYIYGVKQLDESESLELFNLGAFRQATSGKDFVELSRQVVAYSGGLPL 468

Query: 329 ALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG 388
           ALKVLG  L  +  + WES +  L++ P  E++ VL+ S++ L D ++ VFLDIA F  G
Sbjct: 469 ALKVLGSNLYSKRVDFWESELHLLKMFPLQEVQRVLEDSFNDLSDVERRVFLDIALFFIG 528

Query: 389 EHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDMGREIVRKESIN 433
            ++++V+   + S             KS + +D    ++MH LL+ M R+++R++S N
Sbjct: 529 MNQNDVLETLNRSTQCTDLQISLLQDKSFVTIDENNNLQMHVLLQSMARDVIRRKSSN 586


>gi|297848238|ref|XP_002892000.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337842|gb|EFH68259.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 258/871 (29%), Positives = 415/871 (47%), Gaps = 148/871 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G+D R  F SH+      K+I  F+D+++ RG+ I   L   I+ S IA+++
Sbjct: 22  HDVFPSFHGKDVRKAFLSHILKEFGRKAINFFVDNEIKRGEFIGPELKRAIKGSKIALVL 81

Query: 62  FSERYASSRW-------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RFPE 101
            S+ YASS W                    FY VDP+ V+KQ   FG+ F +  K +  E
Sbjct: 82  LSKNYASSSWCLDELAEIMKQESGQTVITIFYEVDPTDVKKQKGDFGKVFKKTCKGKDKE 141

Query: 102 KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSI 160
           K+K W+ AL + A ++G+ S+    E+ +IE IA ++  +L+     ++   L+G+E  +
Sbjct: 142 KIKTWRKALEDVATIAGYHSSNWVDEAAMIENIAAEISNKLNHLTPLRDFDCLIGMEAHM 201

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA------ 214
           + +E  L +  + V  + IWG  GI K TIA  +FN++S  F+ S    +++ +      
Sbjct: 202 KRMEQYLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSSRFQNSALIEDIKGSYPKPCF 261

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------------ 260
           +E      LQ K+LS +   KD  + ++     RL  + V +V DDV             
Sbjct: 262 DEYNAKLQLQYKMLSRMINQKDIMIPHLGVAQERLRNRNVFLVLDDVDRLAQLEALANNV 321

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                 SR+IITT D+ +L     N  Y++      +A ++FC +AFG         EL 
Sbjct: 322 QWFGPRSRIIITTEDRSLLNAHGINHIYKVGFPSNDEALQMFCMYAFGQKSPKDGFYELA 381

Query: 317 DKAIKYAQG-VPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            + I Y  G +PL L+V+G +  G SKE W   + +L      +IE +LK S+D+L D  
Sbjct: 382 -REITYLVGELPLGLRVIGSHFRGLSKEQWSMEISRLRTNLDGDIESILKFSFDALCDED 440

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYR---IRMHDLL 419
           K++FL IACF   E+ +++                    KSLI+++ F     I+MH+LL
Sbjct: 441 KDLFLHIACFFNNENINKLEEFIGQRFKDLSQRLYVLVEKSLISIERFLEYVSIKMHNLL 500

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK-NTGTEAIEGISLDMNKVNREIHMNS 478
             +G+EIVRKES   PG+R  L+ +KDI +V+    T T ++ GI  D       +++  
Sbjct: 501 AQLGKEIVRKES-REPGQRRFLFDNKDICEVVSGYTTNTGSVVGIDSD-----SWLNITE 554

Query: 479 YAFSKMPKLRFLRF--YGDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTLNIC--AEKL 532
            AF  MP L+FLR   Y   +  ++S    + F  +++R +EW   P+ +L      E L
Sbjct: 555 KAFEGMPNLQFLRVVVYNFDHPNIISSSGPLTFISSKLRLIEWWYFPMTSLRFINNLEFL 614

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V LKM  +K+E+LWD ++ L +  C        ++ + + L+ LP+     +LE L ++G
Sbjct: 615 VELKMRYSKLEKLWDGIKLLRNLKC-------MDLANSENLKELPNLSMATSLEELNLEG 667

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIP-----------ESIRHLSKLTFLF---- 634
            +++ ELP S+G L+ +++L L   S L  +P           E+   L KL   F    
Sbjct: 668 CSSLVELPSSVGNLTNLQKLSLEGCSRLVSLPQLPDSPMVLDAENCESLEKLDCSFYNPC 727

Query: 635 -----------------------------ISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
                                        +  C RL +LP+LP +L +L+A NC SLEKL
Sbjct: 728 IHLNFANCFKLNQEARDLLIQTSTARLVVLPGCSRLVSLPQLPDSLMVLNAENCESLEKL 787

Query: 666 PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
               S+  + L  + C  L  +  +L            L +   +   +  P  E+P  F
Sbjct: 788 DCSFSNPGTWLNFSYCFKLNKEARDL------------LIQTSSV-NVVVLPCKEVPACF 834

Query: 726 RHQSMGSSATLK-TRPPRPAGYNKLISFAFC 755
            ++  G+S T+K  + P P      I F  C
Sbjct: 835 TYRGYGNSVTVKLNQKPLPTS----IKFKAC 861


>gi|351722777|ref|NP_001235720.1| resistance protein KR3 [Glycine max]
 gi|24637543|gb|AAN63807.1| resistance protein KR3 [Glycine max]
          Length = 636

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 216/588 (36%), Positives = 321/588 (54%), Gaps = 73/588 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR  FT HLH  L  K I+ F+D+  I RGD I  +L   I+ S IAI 
Sbjct: 35  YDVFINFRGEDTRFAFTGHLHKALCNKGIRAFMDENDIKRGDEIRATLEEAIKGSRIAIT 94

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY+VDPS VR+   S+    +RL +RF
Sbjct: 95  VFSKDYASSSFCLDELATILGCYREKTLLVIPVFYKVDPSDVRRLQGSYAEGLARLEERF 154

Query: 100 PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVGV 156
              M+ WK AL + A+L+G    +    E K I +I +DV  +++    S       VG+
Sbjct: 155 HPNMENWKKALQKVAELAGHHFKDGAGYEFKFIRKIVDDVFDKINKAEASIYVADHPVGL 214

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              +E+I  LL  GS + +  + I G+GG+ K T+A AV+N  + HF+ S F  NVRE  
Sbjct: 215 HLEVEKIRKLLEAGSSDAISMIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREES 274

Query: 216 ETGGIKDLQKKLLSE-LSKDGNMRNIESQL----NRLARKKVRIVFDDVTS--------- 261
              G+K LQ  LLS+ L K+ N+ + +       N+L  KKV +V DDV           
Sbjct: 275 NRHGLKRLQSILLSQILKKEINLASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVG 334

Query: 262 ---------GSRV--IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG-DHLD 309
                    G+R+  IITTRDKQ+L +    + + +KEL   DA +L  + AF   D +D
Sbjct: 335 KSVWSESEFGTRLVLIITTRDKQLLTSYGVKRTHEVKELSKKDAIQLLKRKAFKTYDEVD 394

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
            S+ ++ +  + +  G+PLAL+V+G  L G+S + WESA+++ + IP+ EI ++LK+S+D
Sbjct: 395 QSYNQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKILKVSFD 454

Query: 370 SLDDSQKNVFLDIACFLEG----EHRDEVISIFD----------ASKSLINLDLFYRIRM 415
           +L++ +K+VFLDI C L+G    E  D + S++D            KSLI +    R+ +
Sbjct: 455 ALEEEEKSVFLDITCCLKGYKCREIEDILHSLYDNCMKYHIGVLVDKSLIQIS-DDRVTL 513

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE-- 473
           HDL+ +MG+EI R++S    GKR RLW  KDI QVLK N+GT  ++ I LD    +++  
Sbjct: 514 HDLIENMGKEIDRQKSPKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQET 573

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP 521
           I  N  AF +M  L+ L     +N  +      +P   +R LEW + P
Sbjct: 574 IEWNGNAFKEMKNLKALII---RNGILSQGPNYLP-ESLRILEWHRHP 617


>gi|357499687|ref|XP_003620132.1| Resistance protein [Medicago truncatula]
 gi|355495147|gb|AES76350.1| Resistance protein [Medicago truncatula]
          Length = 1608

 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 256/812 (31%), Positives = 388/812 (47%), Gaps = 129/812 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L   L  K ++TF+DD+ +R G+ I+ SLL  IE S +AI+
Sbjct: 10  YDVFLSFRGEDTRHGFTGYLKKALDDKGVRTFMDDKELRKGEEITPSLLKAIEQSMMAIV 69

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + SE YASS +                       FY+VDPS VRK   SFG    + +  
Sbjct: 70  VLSENYASSSFCLQELSKILDTMKDMVGRSVFPVFYKVDPSDVRKLKRSFGEGMDKHKAN 129

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
               + +WK +L +  DLSGF      PE   I +I   VL  ++         L+G+E 
Sbjct: 130 --SNLDKWKVSLHQVTDLSGFHYKGDTPEHMFIGDIVEQVLGNIEPLALPVGDYLIGLEH 187

Query: 159 SIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             + + SLL IGS+    +  I G+GGI K T+A +V+N I+  F+ S F  NVRE  E 
Sbjct: 188 QKQHLTSLLNIGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVRENHEK 247

Query: 218 GGIKDLQKKLLSELSKDGNM-----RNIESQLNRLARKKVRIVFDDVTS----------- 261
            G+  LQ  +LS++  + N      + I     RL +KK+ ++ DDV             
Sbjct: 248 HGLPYLQNIILSKVVGEKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKALAGKH 307

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF------GGDHLDA 310
                 SR+IITTRDK++L        Y ++ L   DA +L    AF        +++  
Sbjct: 308 KWFGPSSRIIITTRDKKLLTCHGVEHTYEVRGLNAKDAFELVRWKAFKDEFSPSDENVSL 367

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           + + + ++ + YA G PLAL+V+G +   ++ E  + A+ + E +PH +I+  L+IS+D+
Sbjct: 368 AQLHVIERVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQISFDA 427

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMH 416
           L+D +K VFLDIAC  +G     V  I  A               KSLI ++ F  + +H
Sbjct: 428 LEDEEKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGNVTLH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT---------GTEAIEGISLDM 467
           DL+ DMG+EIVR+ES   PGKR RLW   DI QVL++NT         GT  IE I  D 
Sbjct: 488 DLVEDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTVSNNVMDNLGTSQIEIIRFDC 547

Query: 468 -NKVNREIHMNSYAFSKMPK-----LRFLRFYGDKNKCMVS-HLEGVP---FAEVR--HL 515
              V  +     + F K PK     LR L  +   +  +V+  L   P   F  +R  +L
Sbjct: 548 WTTVAWD---GEFFFKKSPKHLPNSLRVLECHNPSSDFLVALSLLNFPTKNFQNMRVLNL 604

Query: 516 EWPQCPLKTLNICAE------------KLVSLK-----MPCTKVEQLWD--DVQRLPSSL 556
           E     ++  NI               KL+++      +   K+ +L +  ++Q +P  +
Sbjct: 605 EGGSGLVQIPNISGLSNLEKLSIKNCWKLIAIDKSVGFLGKLKILRLINCIEIQSIPPLM 664

Query: 557 CTFKTPITFEIIDCKMLERLP-------DELENLEYLTVKGTTIRELPESLGRLSWVKRL 609
               + +   +  C  LE  P       D+L+ +  +  K   +R +P    +L+ ++ L
Sbjct: 665 --LASLVELHLSGCNSLESFPPVLDGFGDKLKTMNVIYCK--MLRSIPPL--KLNSLETL 718

Query: 610 ILSNNSNLERIPESI-RHLSKLTFLFISHCERLQTLPELPCN-LGLLSARNCTSLEKLPA 667
            LS   +LE  P  +   L KL  L +  C +L ++P L  N L  L    C SLE  P 
Sbjct: 719 DLSQCYSLENFPLVVDAFLGKLKTLNVKGCCKLTSIPPLKLNSLETLDLSQCYSLENFPL 778

Query: 668 GLSSMSS---VLYVNLCNFLK-LDPNELSEIV 695
            + +       L V  C+ LK + P +L  ++
Sbjct: 779 VVDAFLGKLKTLNVESCHNLKSIQPLKLDSLI 810


>gi|357474825|ref|XP_003607698.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508753|gb|AES89895.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1165

 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 227/716 (31%), Positives = 362/716 (50%), Gaps = 105/716 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR NFT HL   L ++ I  F DD +L +G++I+  LL  IEAS   I+
Sbjct: 24  YDVFISFRGADTRFNFTDHLFSALQIRGIVAFRDDTKLKKGESIAPELLRAIEASRTFIV 83

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS VRKQS S+ + F++  +RF
Sbjct: 84  VFSNNYASSTWCLRELQYILHCVQLSGKRVLPVFYDVDPSEVRKQSGSYKKAFAQHEERF 143

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++ W+ ALT+ A+LSG+D    +P+S  I++I  +++  L+  F S    LVG 
Sbjct: 144 KQDTEVLQGWRTALTQVANLSGWDIRD-KPQSAEIKKIVEEIVNILNCKFSSLPNDLVGT 202

Query: 157 ECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              IE +E LL +      ++  I G+GG+ K T+A  ++ +IS  F+   F  ++ +  
Sbjct: 203 HSLIERLEKLLLLDVVDDVRIVGISGMGGVGKTTLARILYRRISSRFDACCFIDDLSKIC 262

Query: 216 ETGGIKDLQKKLLSE-----------LSKDGNMRNIESQLNRLARKKVRIVFDDVTSG-- 262
           +  G    QK++LS+           LS   N+       NRL   +  I+ D+V  G  
Sbjct: 263 KHAGPVAAQKQILSQTLGEEHLQICNLSDGANLIQ-----NRLGHLRAFIILDNVDQGEQ 317

Query: 263 --------------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                         SR+II +RD  +L     +  +++  L   ++ +LFCQ AF  D++
Sbjct: 318 LEKLALNRKLLGVGSRIIIISRDTHILNRYGVDVVFKVPLLNQTNSLQLFCQQAFKRDNI 377

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
            +++ EL  + + YA G+PLA+K LG +L GR    W SA+ +L   P+ +I +VL++S+
Sbjct: 378 LSNYDELVYEILNYANGLPLAIKALGSFLFGRDIYEWRSALTRLRDNPNKDIFDVLRLSF 437

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L++ +K +FLDIACF  G     V ++ +               KSLI++    +I M
Sbjct: 438 DGLENMEKEIFLDIACFFNGRKEALVKNVLNCCGFHADIGLRVLIDKSLISISEKSKIEM 497

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LL ++G++IV++ S     K  RLW H+    V+ +N   + +E I L   +      
Sbjct: 498 HGLLEELGKKIVQENSSKDSRKWTRLWLHEYFNNVMSENK-EKNVEAIVLRRGRQRETKI 556

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA--------EVRHLEWPQCPLKTL-- 525
           + + A SKM  LR L             L+G+ F+        E+R++EW + P   L  
Sbjct: 557 VIAEALSKMSHLRMLI------------LDGMDFSGSLDCISNELRYVEWREYPFMYLPS 604

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL 583
           +    +LV L +  + ++QLW+  + LP+         T E+ + K L ++PD  E+ NL
Sbjct: 605 SFQPYQLVELILEDSSIKQLWEGTKYLPNLR-------TLELRNSKSLIKVPDFGEIPNL 657

Query: 584 EYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           E L +KG   + ++  S+  L  +  L L +  NL  IP  +  L+ L +L +S C
Sbjct: 658 ERLNLKGCVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNLSGC 713



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 31/204 (15%)

Query: 572 MLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
           +L  LP  L  L  L +   ++ ++P+++G L W++RL L  N N   +P S R LSKL 
Sbjct: 769 LLPSLP-SLSCLRKLDISYCSLSQIPDAIGCLLWLERLNLGGN-NFVTLP-SFRELSKLA 825

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY-VNLCNFLKLDPNE 690
           +L + +C +L+  PELP         + +S+E   + + S +S      LC F   +  E
Sbjct: 826 YLNLENCMQLKYFPELP---------SASSIEHEHSHMFSDTSYWRRAGLCIF---NCPE 873

Query: 691 LSEIVKDG-----WMKHSLYEERGIKKSMYF-------PGNEIPKWFRHQSMGSSATLKT 738
           L E+ K       WM   L   +    S++F       PG E+P+WF +Q+M SS ++  
Sbjct: 874 LGEMEKCSDLAFSWMIQFLQANQLESSSVFFREINIVIPGTEMPRWFNNQNMESSISIDI 933

Query: 739 RPPRPAGYNKLISFAFCAVVVFPA 762
            P      + +I+FA C  VVF A
Sbjct: 934 SPIMHHD-SDVIAFACC--VVFSA 954


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 256/764 (33%), Positives = 383/764 (50%), Gaps = 112/764 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR  FT HL+  L+ K I TF D+  I  G++I  +LL +I+AS  AI+
Sbjct: 47  FDVFLSFRGEDTRGGFTDHLYKALTRKGISTFRDENEIEEGEHIPSNLLASIDASRFAIV 106

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE-- 101
           + SE YASSRW                  FY+VDPSHV+ QS +F   F +  KRF    
Sbjct: 107 VVSEDYASSRWCLEELARMFECKKEVLPIFYKVDPSHVKNQSGTFEEAFVKHEKRFGRGD 166

Query: 102 -KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS-KNKGLVGVECS 159
            K++ W+  LTE A+   + S     ES +IEEI   + KRL       K   LVG+   
Sbjct: 167 GKVQSWRTFLTELANTKAWLSQSWSHESNIIEEITTKIWKRLKPNLTVIKEDQLVGINSK 226

Query: 160 IEEIESLLCIGS------EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           I ++ SLL   S      + V  + I G+GGI K TIA   + +I   FE   F  NVRE
Sbjct: 227 INKLSSLLIPNSDDDDADDDVIFVGIHGMGGIGKTTIARVCYERIRDEFEAHCFLSNVRE 286

Query: 214 --AEETGGIKDLQKKLLSEL--SKDGNMRNIE---SQLNR-LARKKVRIVFDDVTS---- 261
                 G +  LQ KLLS +   K+ ++ ++E   + +N+ + RKK  +V DDV S    
Sbjct: 287 NYIRTLGNLSCLQTKLLSSMFSLKNNHIMDVEEGTAMINKAIFRKKTLLVLDDVDSSDQI 346

Query: 262 ------------GSRVIITTRDKQVLKNCWANKK-YRMKELVYADAHKLFCQWAFGGDHL 308
                       GSRVIITTR+   L N +  K+ + M EL Y +A +L    AF     
Sbjct: 347 KGLIPDNNSFGNGSRVIITTRNADFLSNEFGVKRIFEMDELKYEEALQLLSLSAFMKTCP 406

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL----EIIPHVEIEEVL 364
              ++E + K +K   G PLALK+LG  L  ++  VW   + ++     I  H +I + L
Sbjct: 407 KEGYLEHSKKIVKVVGGHPLALKLLGSSLRNKNLSVWNEVIEEVGGGGNI--HEKIFKCL 464

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFY 411
           K+SYD LD+ ++ +FLD+ACF  G+ R+ V  I +               KSL+ L    
Sbjct: 465 KVSYDGLDEREREIFLDVACFFNGKRREVVEEILNGCGFYAKTRIELLIQKSLLTLSYDN 524

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
           ++ MH+LL++MGR+IVR + +     R+RL  HKDI  V+     TEA+   S+     +
Sbjct: 525 KLHMHNLLQEMGRKIVRDKHV-----RDRLMCHKDIKSVV-----TEALIQ-SIFFKSSS 573

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE- 530
           + +      FS+M +LR L F   +N  + + LE    +E+R+L+W   PL+ L I +  
Sbjct: 574 KNMVEFPILFSRMHQLRLLNF---RNVRLKNKLEYSIPSELRYLKWKGYPLEFLPIDSSE 630

Query: 531 --KLVSLKMPCTKVEQLWDDVQ--------RLPSSLCTFKTPITFEIIDCKMLERLPDEL 580
             KL+ L M  + ++Q W   +        +L SS    KTP    I + K L     EL
Sbjct: 631 ECKLIELHMCHSNLKQFWQQEKNLVELKYIKLNSSQKLSKTPNFANIPNLKRL-----EL 685

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           E+        T++  +  S+     +  L L +  NL  +P  I ++  L  L +S C +
Sbjct: 686 EDC-------TSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHI-NIKVLEVLILSGCSK 737

Query: 641 LQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCN 682
           ++ +PE   N   L   +   TS+  LP+ ++S+S +  ++L N
Sbjct: 738 VKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLAN 781



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 580  LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            L +L  L +K   +  +P+ +  +  +  L LS N N   +P SI  L  L  L I+ C+
Sbjct: 865  LYSLTKLNLKDCNLEVIPQGIECMVSLVELDLSGN-NFSHLPTSISRLHNLKRLRINQCK 923

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPN-ELSEIVK 696
            +L   P+LP  +  L++++C SL+     + + ++  +  VNL N  ++  N +   ++ 
Sbjct: 924  KLVHFPKLPPRILFLTSKDCISLKDFIDISKVDNLYIMKEVNLLNCYQMANNKDFHRLII 983

Query: 697  DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
                K  ++  +G    M  PG+EIP WF  + MGSS  ++  P  P     +I FA C 
Sbjct: 984  SSMQK--MFFRKGTFNIM-IPGSEIPDWFTTRKMGSSVCMEWDPDAPN--TNMIRFALCV 1038

Query: 757  VV 758
            V+
Sbjct: 1039 VI 1040


>gi|336238977|gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 246/754 (32%), Positives = 378/754 (50%), Gaps = 114/754 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           ++VFLSFRGEDTR NF  HL+  L  K I+T+ DD+ L RG+ I ++LL  I+ S IA++
Sbjct: 78  HEVFLSFRGEDTRRNFVDHLYKDLVQKGIQTYKDDETLPRGERIGRALLKAIQESRIAVV 137

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S W                      FY V+PS VRKQ+  +G+ FS+  ++ 
Sbjct: 138 VFSQNYADSSWCLDELAHIMECVDTRGQILIPIFYYVEPSDVRKQNGKYGKAFSKHERKN 197

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            +K++ W+NAL +A +LSG+  +    E++ I +I   +  RL +   + NK L+G+E  
Sbjct: 198 KQKVESWRNALEKAGNLSGWVIDENSHEAQCISDIVGTISSRLSSLNTNDNKDLIGMETR 257

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + +++ +L IGS GV  + IWG+GG  K T+A A + +IS  FE      N+RE     G
Sbjct: 258 LRDLKLMLEIGSGGVRMVGIWGVGGGGKTTLASAAYMEISHLFEACCLLENIREESSKHG 317

Query: 220 IKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
           +K LQ+K+LS   K     D  +        RL  K+V +V DDV               
Sbjct: 318 LKKLQEKILSVALKTTVVVDSEIEGRSMIKRRLCHKRVLVVLDDVDELEQLEALAGSHDW 377

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GSR+IITTRDK +L +      Y +  L Y +A KLF + A+  D     + +L+ +
Sbjct: 378 FGEGSRIIITTRDKHLLSSRAHTNIYEVSLLSYYEAIKLFNRHAYYKDKPIEDYEKLSLR 437

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            + YA G+PLALKVLG +L  + K+ W+S + KL+ IP  ++ E LKISYD L+  QK++
Sbjct: 438 VVSYAGGLPLALKVLGSFLYDKDKDEWKSTLAKLKCIPEEKVMERLKISYDGLEPYQKDL 497

Query: 379 FLDIACFLEGEHR---DEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           FLDIACF+   +    DE + + DA              KSLI +   Y   MHDL+ +M
Sbjct: 498 FLDIACFMRHNYSLEMDEAMMVLDACNFYPVIGLKVLEQKSLIKVSK-YGFEMHDLIEEM 556

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
              IVR E  N+  K +R+W  +D+  +        ++E      N+V     M  Y  S
Sbjct: 557 AHYIVRGEHPNNLEKHSRIWRWEDLRYLCDMGAAAPSME------NEVLASFAM--YYRS 608

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
             P L            +V++++      +R ++W   P  +   N    KL  L +  +
Sbjct: 609 SHPGL----------SDVVANMKN-----LRWIKWDWYPASSFPSNFQPTKLRCLMLRSS 653

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLTVKGT-TIR 594
             E LW+  + LP+           +I+D    K L   PD   L  LE L + G  ++ 
Sbjct: 654 WQETLWEGCKSLPN----------LKILDLRESKSLITTPDFEGLPCLERLILWGCESLE 703

Query: 595 ELPESLGRLSWVKRLI---LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           E+  S+G   + KRL+   L++ + L+R P  I H+ KL  L +  C R Q  P++  N+
Sbjct: 704 EIHPSIG---YHKRLVFVNLTSCTALKRFPPII-HMKKLETLILDGCRRPQQFPDIQSNM 759

Query: 652 GLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNF 683
             L   +   T +E +P  +    +    NL +F
Sbjct: 760 DSLVTLDLSRTGIEIIPPSIGRFCT----NLVSF 789



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 29/51 (56%)

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
           + +N  R+P  I  L  L +L ++ C RL  LP+LP ++ LL    C SLE
Sbjct: 872 SGNNFSRLPSRISQLPCLKYLNLTCCARLAELPDLPSSIALLYVDGCDSLE 922


>gi|238481459|ref|NP_001154757.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007336|gb|AED94719.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1114

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 280/1003 (27%), Positives = 454/1003 (45%), Gaps = 183/1003 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF  F G D R  F SHLH + + K I TF D  + RG  I   L+  I+ + ++I++
Sbjct: 16  HHVFSRFHGPDVRKGFLSHLHSLFASKGITTFNDQNIERGQTIGPELIQGIKEARVSIVV 75

Query: 62  FSERYASSRWFFYRVDP--------SHVRKQSHSFGRHFSRLRKRFPEKMK-RWKNALTE 112
            S+ YASS W    +            +   S  FG+ F +  +   E++K RW+NAL  
Sbjct: 76  LSKNYASSSWCLDELVEILKCKEALGQIVMTSGVFGKAFEKTCQGKNEEVKIRWRNALAH 135

Query: 113 AADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE 172
            A ++G  S     E+K+I++IA DV  +L+ T     +G+VG+E  ++ + SLLC+ S+
Sbjct: 136 VATIAGEHSLNWDNEAKMIQKIATDVSDKLNLTPSRDFEGMVGMEAHLKRLNSLLCLESD 195

Query: 173 GVCKLRIWGIGGISKITIAGAVFN-KISRHFEGSYFALNVREAEETGGIKD------LQK 225
            V  + IWG  GI K TIA A+F+ ++S  F+   F  N++ +    G+ D      LQK
Sbjct: 196 EVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS--IKGVADHDSKLRLQK 253

Query: 226 KLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT----------------SGSRVII 267
           +LLS++ K+ NM+  ++ +   RL  ++V I+ DDV                 SGSR+I 
Sbjct: 254 QLLSKIFKEENMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFGSGSRIIG 313

Query: 268 TTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVP 327
           TT DK++LK    +  YR+      DA ++ C  AF    +     EL +K  K    +P
Sbjct: 314 TTEDKKILKAHGIHNIYRVDFPSKKDALEILCLSAFKQSSIPDGFEELANKVAKLCSNLP 373

Query: 328 LALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE 387
           L L V+G  L G   + WE  + ++E     +I+++L+I YD L  + K++FL IACF  
Sbjct: 374 LGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGYDRLLTNDKSLFLHIACFFN 433

Query: 388 GEHRDEVISIFDASKSLINLDL-----------FYRIRMHD----LLRDMGREIVRKESI 432
               D V ++   S    NLD+             RI  +D    +L D   +IV ++S 
Sbjct: 434 YAKVDNVTALLADS----NLDVGNGFNTLADRSLVRISTYDDGISVLSDSNLDIVLEQS- 488

Query: 433 NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
             PGKR  +   ++I  VL   TGT ++ GIS D + +  E+ ++  AF  M  LRFLR 
Sbjct: 489 KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIG-EVSVSKDAFEGMRNLRFLRI 547

Query: 493 Y----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
           Y    G+    +   ++ +P   +R L W + P K+L      E+LV L MP + +E LW
Sbjct: 548 YRLLGGEVTLQIPEDMDYIP--RLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNLELLW 605

Query: 547 DDVQRLPS---------------------------------SLCTFKTPIT----FEIID 569
             ++ LP+                                 SL    + I+     EI+D
Sbjct: 606 GGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHKLEILD 665

Query: 570 ---CKMLERLPD--ELENLEYLTVKGTT---------------------IRELPESLGRL 603
              C ML+ +P    L +LE L V G +                     I ++P S+G  
Sbjct: 666 VKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCW 725

Query: 604 SWVKRLILSN-------------------NSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           S + +L +S+                    S +ERI + +  L++L +L +  C +L+++
Sbjct: 726 SRLDQLHISSRSLKRLMHVPPCITLLSLRGSGIERITDCVIGLTRLHWLNVDSCRKLKSI 785

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
             LP +L +L A +C SL+++     +    L  N C  LKLD     E  K G +    
Sbjct: 786 LGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFNNC--LKLD-----EEAKRGII---- 834

Query: 705 YEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFL 764
             +R + + +  P  +IP+ F H++ G S T+   P   +  ++  +    ++++ P   
Sbjct: 835 --QRSVSRYICLPCKKIPEEFTHKATGKSITIPLAPGTLSASSRFKA----SILILPVES 888

Query: 765 KYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF- 823
                 S      G V   CC+        L   FL     V S+H+F+    F G+ F 
Sbjct: 889 YETEGISCSIRTKGGVEVHCCE--------LPYHFL----RVRSEHLFI----FHGDLFP 932

Query: 824 -GPNYDEFSFRI-HCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
            G  Y E    +   +F F       ++ +CG+  +      D
Sbjct: 933 QGNKYHEVDVTMSEITFEFSHTKIGDKIIECGVQIMTEGAEGD 975


>gi|357500727|ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
 gi|355495667|gb|AES76870.1| Elongation factor Ts [Medicago truncatula]
          Length = 2436

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 265/931 (28%), Positives = 426/931 (45%), Gaps = 206/931 (22%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT  L   L  K I  F DD  L +G+++   LL  I+   + ++
Sbjct: 20  YDVFITFRGEDTRNNFTDFLFDALETKGIFAFRDDTNLQQGESLEPELLRAIKGFQVFVV 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS VRKQS  +   F +  KRF
Sbjct: 80  VFSRNYASSTWCLKELEKICECVKGSKKHVIPVFYDVDPSEVRKQSGIYCEAFVKHEKRF 139

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E + RW+ AL +   +SG+D    +P++  I++I   ++  L+      +K LVG+
Sbjct: 140 QQGFEMVSRWREALKQVGSISGWDL-CDKPQAGEIKKIVQKIMNILECKSSCVSKDLVGI 198

Query: 157 ECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +  IE +++ L +   +GV  +RI G+GGI K T+A  ++ +IS  F  S F  +V +  
Sbjct: 199 DSPIEALKNHLVLDLVDGVRAIRICGMGGIGKTTLAMNLYGQISHRFSASCFIDDVSKIY 258

Query: 216 ET-GGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G  D QK++L +    +   + N  S ++    RL R+K  ++FD+V         
Sbjct: 259 RLYDGPIDAQKQILHQTLGIEHHQICNRYSAIDLIQRRLRREKALLIFDNVDQVEQLEKI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR+II +RD+ +LK    +  Y+++ L + ++HKLFC+ AF  + +  S+
Sbjct: 319 GVHRECLGAGSRIIIISRDEHILKEYEVDVVYKVQLLNWTESHKLFCRKAFKAEKIIMSN 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            + L +K + YA G+PLA+KVLG +L GR+   W+SA+ KL   P+ ++ +VL++S+D L
Sbjct: 379 YQNLANKILNYASGLPLAIKVLGSFLFGRNVTEWKSALAKLRESPNKDVMDVLQLSFDGL 438

Query: 372 DDSQKNVFLDIACF---LEGEHRDEVISI--FDAS--------KSLINLDLFYRIRMHDL 418
           + ++K +FLDIAC    L+ E+   +++   F+A         KSLI+++    I MH L
Sbjct: 439 EKTEKQIFLDIACLFNCLDMEYVKNILNCCGFNADIGIRVLIDKSLISIN-GQNIEMHSL 497

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQV-------------LKKNTGTEA------ 459
           L+++GR+IV+K S   P K +RLW  K +Y V             LK+N   +       
Sbjct: 498 LKELGRKIVQKTSSKEPRKWSRLWSAKQLYDVKMENMEKNVEAILLKRNEEVDVEHLSKM 557

Query: 460 -------------IEGISLDMNKVNREIHMNSYAFSKMP--------------------- 485
                        I G S  ++   R +  + Y F  +P                     
Sbjct: 558 SNLRLLIIKCNWNISGGSNFLSNELRYVDWHEYPFKYLPTSFHPNELVELILWCSNIKQL 617

Query: 486 --------KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAE------- 530
                    LR L   G  N   +     + F E  +LEW       L +C         
Sbjct: 618 WKNKKYLRNLRKLDLMGSINLEKI-----IDFGEFPNLEWLD-----LELCKNLVELDPS 667

Query: 531 -----KLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELE 581
                KLV L +  C K+ +L   +  L   +C         + DC+ L  +P+   +L 
Sbjct: 668 IGLLRKLVYLNLGGCKKLVELDPSIGLLRKLVC-------LNVKDCENLVSIPNNIFDLS 720

Query: 582 NLEYLTVKGTT-----------------------------------IRELPESLGRLSWV 606
           +LEYL + G +                                   + ++P+++  L W+
Sbjct: 721 SLEYLNMNGCSKVFNNSLPSPTRHTYLLPSLHSLDCLRGVDISFCNLSQVPDAIEDLHWL 780

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP 666
           +RL L  N N   +P S+R LS+L +L + HC+ L++LP+LP    +   R+    +   
Sbjct: 781 ERLNLKGN-NFVTLP-SLRKLSELVYLNLEHCKLLESLPQLPSPTTIGRERDEND-DDWI 837

Query: 667 AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFR 726
           +GL     V++    N  KL   E    +   WM   +         +  PG+EIP W  
Sbjct: 838 SGL-----VIF----NCSKLGERERCSSMTFSWMIQFILANPQSTSQIVIPGSEIPSWIN 888

Query: 727 HQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           +Q +G S  +   P      N+   F  CAV
Sbjct: 889 NQCVGDSIQIDLSPAMHDNNNQSHYFVCCAV 919



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 247/796 (31%), Positives = 384/796 (48%), Gaps = 125/796 (15%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
            YDVF++FRGEDTR+NF   L   L  K I  F D++ L +G++I   LL +IE S + + 
Sbjct: 1382 YDVFVTFRGEDTRNNFIDFLFDALETKGILVFRDNRNLQKGESIGPELLQSIEGSQVYVA 1441

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS  YA S W                      FY VDPS VRKQS  + + F +  +RF
Sbjct: 1442 VFSRNYAFSTWCLQEIEKIWECVQGSEKLVLPVFYDVDPSEVRKQSGIYDKAFVKHEQRF 1501

Query: 100  PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             +    + RW+ AL +   +SG+D    +P+   I++I   ++  L+      +K LVG+
Sbjct: 1502 QQNSQMVSRWREALKQVGSISGWDL-CDKPQVGEIKKIVQRIMNILECNSSCVSKDLVGI 1560

Query: 157  ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
            +  IE +++ L + S +GV  + I G+GGI K T+A  ++++IS  F  + F  +V +  
Sbjct: 1561 DSPIEALQNHLLLDSVDGVHAIGICGMGGIGKTTLAMTLYDQISHRFSANCFIDDVSKIY 1620

Query: 216  E-TGGIKDLQKKLLSELSKDGNM----RNIESQL--NRLARKKVRIVFDDVT-------- 260
                G  D QK++L +     +     R I + L   RL+R+K  ++ D+V         
Sbjct: 1621 RLCDGPLDAQKQILFQTLDIKHHQICNRYIATDLIRRRLSREKTLVILDNVDQGEQSEKI 1680

Query: 261  --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    +GSR+II +RD+ +LK    +  Y++  L   D+HKLFCQ AF  + +  S 
Sbjct: 1681 AVHREWLGAGSRIIIISRDEHILKEYGVDVVYKVPLLNRTDSHKLFCQKAFKHEKIIMSS 1740

Query: 313  IELTD-KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             +  D + + YA G+PLA+KVLG +L GR+   W+SA+ +L   P  ++ +VL++S+D L
Sbjct: 1741 YQNLDFEILSYANGLPLAIKVLGSFLFGRNVTEWKSALARLRERPDNDVMDVLQLSFDGL 1800

Query: 372  DDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDL 418
            +  +K +FLDIACF   E    V ++ +               KSLI+++    I MH L
Sbjct: 1801 NHMEKEIFLDIACFFNRESEKYVKNVLNHCGFHADIGLRVLIDKSLISINSDSVIEMHSL 1860

Query: 419  LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
            L ++GR+IVR+ S     K +R+W  K +Y V  +      +E I L+ + V     ++ 
Sbjct: 1861 LVELGRKIVRENSSKEQRKWSRVWSQKQLYNVTMEKM-ERHVEAIVLNDDDV---EEVDV 1916

Query: 479  YAFSKMPKLRFLRF-YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
               SKM  LR L   +G       S L       +R++EW   P K L  +     LV L
Sbjct: 1917 EQLSKMSNLRLLIIKWGPNIPSSPSSLSNT----LRYVEWNYYPFKYLPSSFHPSDLVEL 1972

Query: 536  KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GTT 592
             +  + ++QLW + + LP+           ++   + LE++ D  E  NLE+L ++    
Sbjct: 1973 ILMYSDIKQLWKNKKYLPNLR-------RLDLRHSRNLEKIVDFGEFPNLEWLNLELCAN 2025

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT-----LPEL 647
            + EL  S+G L  +  L L    NL  IP +I  LS L  L I  C +  +     LP  
Sbjct: 2026 LVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKAFSSSSIMLPTP 2085

Query: 648  PCNLGLLS---ARNCT---------------------SLEKLPAG---------LSSMSS 674
              N  LL    + NC                      SLEKL  G         L  +S 
Sbjct: 2086 MRNTYLLPSVHSLNCLRKVDISFCHLNQVPDSIECLHSLEKLNLGGNDFVTLPSLRKLSK 2145

Query: 675  VLYVNL--CNFLKLDP 688
            ++Y+NL  C FLK  P
Sbjct: 2146 LVYLNLEHCKFLKSFP 2161


>gi|22327500|ref|NP_198989.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007335|gb|AED94718.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 280/1003 (27%), Positives = 454/1003 (45%), Gaps = 183/1003 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF  F G D R  F SHLH + + K I TF D  + RG  I   L+  I+ + ++I++
Sbjct: 16  HHVFSRFHGPDVRKGFLSHLHSLFASKGITTFNDQNIERGQTIGPELIQGIKEARVSIVV 75

Query: 62  FSERYASSRWFFYRVDP--------SHVRKQSHSFGRHFSRLRKRFPEKMK-RWKNALTE 112
            S+ YASS W    +            +   S  FG+ F +  +   E++K RW+NAL  
Sbjct: 76  LSKNYASSSWCLDELVEILKCKEALGQIVMTSGVFGKAFEKTCQGKNEEVKIRWRNALAH 135

Query: 113 AADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE 172
            A ++G  S     E+K+I++IA DV  +L+ T     +G+VG+E  ++ + SLLC+ S+
Sbjct: 136 VATIAGEHSLNWDNEAKMIQKIATDVSDKLNLTPSRDFEGMVGMEAHLKRLNSLLCLESD 195

Query: 173 GVCKLRIWGIGGISKITIAGAVFN-KISRHFEGSYFALNVREAEETGGIKD------LQK 225
            V  + IWG  GI K TIA A+F+ ++S  F+   F  N++ +    G+ D      LQK
Sbjct: 196 EVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS--IKGVADHDSKLRLQK 253

Query: 226 KLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT----------------SGSRVII 267
           +LLS++ K+ NM+  ++ +   RL  ++V I+ DDV                 SGSR+I 
Sbjct: 254 QLLSKIFKEENMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFGSGSRIIG 313

Query: 268 TTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVP 327
           TT DK++LK    +  YR+      DA ++ C  AF    +     EL +K  K    +P
Sbjct: 314 TTEDKKILKAHGIHNIYRVDFPSKKDALEILCLSAFKQSSIPDGFEELANKVAKLCSNLP 373

Query: 328 LALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE 387
           L L V+G  L G   + WE  + ++E     +I+++L+I YD L  + K++FL IACF  
Sbjct: 374 LGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGYDRLLTNDKSLFLHIACFFN 433

Query: 388 GEHRDEVISIFDASKSLINLDL-----------FYRIRMHD----LLRDMGREIVRKESI 432
               D V ++   S    NLD+             RI  +D    +L D   +IV ++S 
Sbjct: 434 YAKVDNVTALLADS----NLDVGNGFNTLADRSLVRISTYDDGISVLSDSNLDIVLEQS- 488

Query: 433 NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
             PGKR  +   ++I  VL   TGT ++ GIS D + +  E+ ++  AF  M  LRFLR 
Sbjct: 489 KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIG-EVSVSKDAFEGMRNLRFLRI 547

Query: 493 Y----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
           Y    G+    +   ++ +P   +R L W + P K+L      E+LV L MP + +E LW
Sbjct: 548 YRLLGGEVTLQIPEDMDYIP--RLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNLELLW 605

Query: 547 DDVQRLPS---------------------------------SLCTFKTPIT----FEIID 569
             ++ LP+                                 SL    + I+     EI+D
Sbjct: 606 GGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHKLEILD 665

Query: 570 ---CKMLERLPD--ELENLEYLTVKGTT---------------------IRELPESLGRL 603
              C ML+ +P    L +LE L V G +                     I ++P S+G  
Sbjct: 666 VKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCW 725

Query: 604 SWVKRLILSN-------------------NSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           S + +L +S+                    S +ERI + +  L++L +L +  C +L+++
Sbjct: 726 SRLDQLHISSRSLKRLMHVPPCITLLSLRGSGIERITDCVIGLTRLHWLNVDSCRKLKSI 785

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
             LP +L +L A +C SL+++     +    L  N C  LKLD     E  K G +    
Sbjct: 786 LGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFNNC--LKLD-----EEAKRGII---- 834

Query: 705 YEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFL 764
             +R + + +  P  +IP+ F H++ G S T+   P   +  ++  +    ++++ P   
Sbjct: 835 --QRSVSRYICLPCKKIPEEFTHKATGKSITIPLAPGTLSASSRFKA----SILILPVES 888

Query: 765 KYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF- 823
                 S      G V   CC+        L   FL     V S+H+F+    F G+ F 
Sbjct: 889 YETEGISCSIRTKGGVEVHCCE--------LPYHFL----RVRSEHLFI----FHGDLFP 932

Query: 824 -GPNYDEFSFRI-HCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
            G  Y E    +   +F F       ++ +CG+  +      D
Sbjct: 933 QGNKYHEVDVTMSEITFEFSHTKIGDKIIECGVQIMTEGAEGD 975


>gi|357486563|ref|XP_003613569.1| Disease resistance-like protein [Medicago truncatula]
 gi|355514904|gb|AES96527.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1082

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 257/759 (33%), Positives = 380/759 (50%), Gaps = 92/759 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFL+F G+DTR +FT +L+  L  K I+ FIDD +L RGD I+ SL+  IE S IAI 
Sbjct: 22  YDVFLNFCGDDTRFHFTGNLYKALCDKGIRVFIDDKELQRGDKITPSLIKAIEDSRIAIP 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           +FS+ YA S +                      FY VDPSHVR Q  S+G     H +RL
Sbjct: 82  VFSKNYAFSSFCLDELVNIIDGFSAKGRLVLPVFYDVDPSHVRHQIGSYGEAIAMHEARL 141

Query: 96  RKRFP------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQS 148
           ++         +++++WK AL +AA+LSG+  N     E + I  I  +V K+++     
Sbjct: 142 KRDKEMYIDNMDRLQKWKTALNQAANLSGYHFNHGNEYEHEFIGRIMKEVAKKINRDLLH 201

Query: 149 KNKGLVGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
                VG+E  + ++ SLL + S  GV  + I GIGGI K T+A A++N I+  FE   F
Sbjct: 202 VADYAVGLESRLLQVNSLLSVESNNGVYMVGIHGIGGIGKTTLARAIYNLIADQFECLCF 261

Query: 208 ALNVREAEETGGIKDLQKKLLSE-LSKDGNMRNIESQL----NRLARKKVRIVFDDVTS- 261
             +VRE     G++ LQ++LLS+ +  D  + ++   +     RL +KKV ++ DDV   
Sbjct: 262 LHDVRENSSKHGLEHLQERLLSKTIGLDIKLGHVSEGIPIIKQRLQQKKVLLILDDVDEQ 321

Query: 262 ---------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                          GSRVIITTRDK +L +   ++ Y +  L   +A +L     F  +
Sbjct: 322 KQLQVMVGEPDWFGPGSRVIITTRDKHLLTSHGIDRIYEVDGLNGEEALELLRWKTFKNN 381

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
            +D+S   +    + YA G+PLAL+V+G  L G++ E W+S   + E IP   I ++LK+
Sbjct: 382 KVDSSFEYILKYVVTYASGLPLALEVVGSNLFGKNIEEWKSTFDRYEWIPGKRIHKILKV 441

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYR 412
           S+DSL++ +K+VFLDIAC  +G    EV  I  A               KSLI ++ +  
Sbjct: 442 SFDSLEEDEKSVFLDIACCFKGYDLTEVEFILCAHYGKCIKYHIGVLVEKSLIKINQWGY 501

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + +H L+ DMG+EIVRKES  HPGKR+RLW H+DI QVL++N GT  IE + LD      
Sbjct: 502 VTLHHLIEDMGKEIVRKESPKHPGKRSRLWFHEDIVQVLEENMGTTEIEIVYLDFPLFEE 561

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
            +      F KM  L+ L            HL       +R LEW + P  ++  N   +
Sbjct: 562 VVEWKGDEFKKMINLKTLIIKNGHFSKGPKHLPN----SLRVLEWHRYPSLSIPSNFYQK 617

Query: 531 KLVSLKMP---CTKVE---QLWDDVQRLPSSLCTFKTPITFEIIDC--KMLERLPDELEN 582
           KL   K+     T  E    L   V    S +   KT +TF I+    K +      L+N
Sbjct: 618 KLSICKLGESFFTTFELHGSLKVCVNEFISLVLYTKTILTFIIVLILQKFVNMRELNLDN 677

Query: 583 LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
            +YLT     +  LP        ++++   +  NL  I  S+  L+KL  +    C +L 
Sbjct: 678 CKYLT-HIFDVSCLPN-------LEKISFRHCENLMTIDSSVGFLNKLKIIRADGCLKLM 729

Query: 643 TLPELP-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           + P +   +L  L    C SLE  P  L  M ++  + L
Sbjct: 730 SFPPMELTSLQRLELSFCDSLECFPEILGEMENITEIVL 768



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 58/232 (25%)

Query: 565 FEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIP 621
            E+  C  LE  P+   E+EN+  + ++GT+I EL  S   L+ +++L +   S + R+P
Sbjct: 742 LELSFCDSLECFPEILGEMENITEIVLEGTSIEELSYSFQNLTGLRKLQI-RRSGVLRLP 800

Query: 622 ESIRHLSKLTFLFISHCERLQTLPE--------LPCNLGLLSARNCT-SLEKLPAGLSSM 672
            +I  + KL+++ +   E +  LP            N+ +L   NC  S E L   L+  
Sbjct: 801 SNILMMPKLSYILV---EGILLLPNKNDNLSSSTSSNVEILRLPNCNLSDEFLQTSLAWF 857

Query: 673 SSVLYVNL--------------CNFL---------------KLDPN----------ELSE 693
           ++V++++L              C+FL                + PN           LS 
Sbjct: 858 ANVIHLDLSRNSFTILPEFIKECHFLITLNLNDCTCLREIRGIPPNLKRLSALQCESLSS 917

Query: 694 IVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRPPRPA 744
             +   +   L+E          PG   IP+WF+HQ+ GSS +   R   P+
Sbjct: 918 SCRSMLLNQELHEAGS--TDFCLPGTSPIPEWFQHQTRGSSISFWFRNNVPS 967


>gi|356502071|ref|XP_003519845.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 694

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 181/468 (38%), Positives = 276/468 (58%), Gaps = 48/468 (10%)

Query: 73  FYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM---KRWKNALTEAADLSGFDSNV-IRPES 128
           F+ VDPSHVR Q   +G   ++  ++  E M   K W++A+ +AADLSGF        ES
Sbjct: 16  FFNVDPSHVRHQCGDYGDALAKHEEKLKENMLKVKTWRSAMKKAADLSGFHYPTNFEDES 75

Query: 129 KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
            L+  I  D+ ++L      ++ GLVG++ +I  I+SLL + S  V  + IWG+GGI K 
Sbjct: 76  DLVHGIVEDIWEKLSKFCPRESNGLVGIDQNIARIQSLLLMESSEVLFVGIWGMGGIGKT 135

Query: 189 TIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL--------SKDGNMRNI 240
           TIA AVF+K S  ++G  F LNV+E  E  G+  L++KL+SEL        S     R +
Sbjct: 136 TIARAVFDKFSSQYDGLCF-LNVKEELEQHGLSLLREKLISELFEGEGLHTSGTSKARFL 194

Query: 241 ESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKY 284
            S + R+ RKKV +V DDV +                GSRVIIT+RD+ VL +   ++ +
Sbjct: 195 NSSIRRMGRKKVLVVLDDVNTSEQIKDLVGEPTCFGAGSRVIITSRDQNVLTSGGVHQIH 254

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK-E 343
            +KE+   D+ KLFC  AF        + +LT++ +K AQG+PLAL+VLG     RS  +
Sbjct: 255 EVKEMDSRDSLKLFCLNAFNESQPKMGYEKLTEEVVKIAQGIPLALRVLGADFRSRSTID 314

Query: 344 VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--- 400
           +WESA+ K++  P+ +I+ VL+ S+D L++ +K  FLDIA F E + +D VI+  DA   
Sbjct: 315 MWESALSKIKKYPNKKIQSVLRFSFDGLEELEKKAFLDIAFFFEEDSKDYVITQLDAWGF 374

Query: 401 ----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                      K+LI +    RI+MHDL R MG EIVR+ESI +PG+R+RL   +++Y V
Sbjct: 375 YGAVGIEVLQRKALITISKDNRIQMHDLTRQMGCEIVRQESITNPGRRSRLRDSEEVYNV 434

Query: 451 LKKNTGTEAIEGISLDMNK-VNREIHMNSYA----FSKMPKLRFLRFY 493
           L+   GT+ +E + +D+++ ++  + ++++     F KMP+LRFL+FY
Sbjct: 435 LRHEQGTDEVEAMQIDVSQAIDLRLELSTFKKFSNFKKMPRLRFLKFY 482


>gi|356499338|ref|XP_003518498.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1724

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 251/752 (33%), Positives = 374/752 (49%), Gaps = 105/752 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+NF  HL   LS K +K F DD+ L  G+ IS SL   IE S I II
Sbjct: 14  YDVFISFRGEDTRNNFIGHLRKELSRKGMKIFFDDRDLPVGNVISPSLSKAIEESKILII 73

Query: 61  IFSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           +FS+ YASS W                        FY VDPS VRKQ+ S+G H ++  +
Sbjct: 74  VFSKNYASSTWCLDELVKILEQSKISEMKQLVFPVFYHVDPSDVRKQTESYGEHMTKHEE 133

Query: 98  RF---PEKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGL 153
            F    +K++ W+ AL EA++  G         E   IE+I   V K +        +  
Sbjct: 134 NFGKASQKLQAWRTALFEASNFPGHHITTRSGYEIDFIEKIVEKVQKNIAPKPLYTGQNP 193

Query: 154 VGVECSIEEIESLLCIG--SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           VG+   +EE+ SLL +    E V  L +WG+GG+ K  +A A+++ I + F+ + F  +V
Sbjct: 194 VGLGPRVEEVMSLLDMKPYDETVRMLGVWGLGGVGKTELAKALYDNIVQSFDAASFLADV 253

Query: 212 REA-EETGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARK------------------ 250
           RE   +  G++DLQK LLSE+ +  D  + +    +  + RK                  
Sbjct: 254 REKLNKINGLEDLQKTLLSEMREELDTELGSAIKGMFEIKRKLKGKKVLLVLDDVDDKDK 313

Query: 251 --KVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
             K+    D   SGSR+IITTRDK VL     +  Y+M+EL    + +LFC  AF   H 
Sbjct: 314 LEKLAGGRDWFGSGSRIIITTRDKDVLIAHQVDNIYQMEELDKHHSLELFCWNAFKQSHP 373

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCG---RSKEVWESAMRKLEIIPHVEIEEVLK 365
                +++ +AI  A+G+PLALKV+G  L      S E W+ A+ + E  P   I +VLK
Sbjct: 374 KTGFEDVSLRAIYVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERILDVLK 433

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLI-NLDLFYR----------IR 414
            SYD L    K VFLDIACF +GE ++ V +I D   ++  N+++  +          ++
Sbjct: 434 KSYDRLGSKPKQVFLDIACFFKGEKKEYVENILDDIGAITYNINVLVKKSLLTIEDGCLK 493

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDL++DMGR IVR+E  ++PG+R+RLW+++D+ ++L  + G+  I+GI LD  +   E+
Sbjct: 494 MHDLIQDMGRVIVRQEEPDNPGERSRLWYYEDVIEILTDDLGSNKIQGIMLDPPQ-REEV 552

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
             +  AF KM +LR L     +N    S  E +P   +R L+W + P K+       +K+
Sbjct: 553 DWSGTAFEKMKRLRILIV---RNTSFSSEPEHLP-NHLRVLDWIEYPSKSFPSKFYPKKI 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
           V               V   P S  T + P  F+   C         L N+++      +
Sbjct: 609 V---------------VFNFPRSHLTLEEP--FKKFPC---------LTNMDF--SYNQS 640

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT--LPELPCN 650
           I E+P+  G +  +++L L    NL  + ES+  L KL  L  S C  L+   L     +
Sbjct: 641 ITEVPDVSG-VENLRQLRLDQCKNLTTVHESVGFLKKLAHLSASGCTNLRNFLLKMFLPS 699

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
           L +L    C  LE  P  +  M   L + + N
Sbjct: 700 LKVLDLNLCIMLEHFPDIMKEMKEPLKIYMIN 731



 Score = 45.8 bits (107), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 28/175 (16%)

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCT 540
           F K P L  + F  +++   V  + GV    +R L   QC  K L    E +  LK    
Sbjct: 624 FKKFPCLTNMDFSYNQSITEVPDVSGV--ENLRQLRLDQC--KNLTTVHESVGFLK---- 675

Query: 541 KVEQLWDDVQRLPSSLCT----FKTPI---TFEIID---CKMLERLPDELENLE---YLT 587
                   +  L +S CT    F   +   + +++D   C MLE  PD ++ ++    + 
Sbjct: 676 -------KLAHLSASGCTNLRNFLLKMFLPSLKVLDLNLCIMLEHFPDIMKEMKEPLKIY 728

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           +  T I+E+PES+G L+ +  L +SN+  L+ +P S+  L  +    I  C +L+
Sbjct: 729 MINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVFMLPNVVAFKIGGCSQLK 783



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 13/139 (9%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL---------PE 598
           +++ LPSS+      + F+I  C  L++    L++     V+  T+R L          +
Sbjct: 757 ELKYLPSSVFMLPNVVAFKIGGCSQLKKSFKSLQSPSTANVR-PTLRTLHIENGGLLDED 815

Query: 599 SLGRLSWVKRL--ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
            L  L+   +L  ++++ +N   +P  I+    LT L +S C +LQ +PE   NL +L+ 
Sbjct: 816 LLAILNCFPKLEVLIASKNNFVSLPACIKECVHLTSLDVSACWKLQKIPEC-TNLRILNV 874

Query: 657 RNCTSLEKLPAGLSSMSSV 675
             C  LE++    S++  V
Sbjct: 875 NGCKGLEQISELPSAIQKV 893


>gi|357456937|ref|XP_003598749.1| Resistance protein [Medicago truncatula]
 gi|355487797|gb|AES69000.1| Resistance protein [Medicago truncatula]
          Length = 1075

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 267/817 (32%), Positives = 400/817 (48%), Gaps = 138/817 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKS-IKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           YDVFLSFRG DTR+NFT +L++ L  +S I+TFIDD+ I +G+ I+ +LL  I+ S I I
Sbjct: 18  YDVFLSFRGIDTRNNFTGNLYNSLQNQSGIQTFIDDEEIQKGEEITPTLLKAIKESRIFI 77

Query: 60  IIFSERYASS------------------RWF---FYRVDPSHVRKQSHSFGRHFSRLRKR 98
            I S  YASS                  RWF   FY V+P+ +R  + ++   F++   R
Sbjct: 78  AILSPNYASSTFCLTELVTILECSKSKGRWFLPIFYDVEPTQIRNLTGTYAEAFAKHEVR 137

Query: 99  F---PEKMKRWKNALTEAADLSG--FDSNVI----------------------RPESKLI 131
           F    +K+++W++AL +AA LSG  F    +                      + E K I
Sbjct: 138 FRDEKDKVQKWRDALRQAASLSGWHFQPGYVSKIQVYLHSGTGVWNELGQKRSQQEYKFI 197

Query: 132 EEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITI 190
             I  +V  R++          VG+E  I E+ SLL   S E V  + I+GIGGI K TI
Sbjct: 198 RMIVANVSIRINRVPLHVANNPVGLESQIIEVASLLEFKSDERVNMVGIYGIGGIGKSTI 257

Query: 191 AGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL-----SKDGNMRNIESQLN 245
           A A+ N  +  FEG  F  ++RE      +  LQ+ LLSE+      K G++    S + 
Sbjct: 258 ARALHNLSADQFEGVCFLGDIRERATNHDLAQLQETLLSEVFGEKGIKVGDVYKGMSMIK 317

Query: 246 -RLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKE 288
            RL RKKV ++ D+V                  GS++IITTRDK +L      K Y +++
Sbjct: 318 ARLKRKKVLLILDNVDKVQQLRALVGAPDWFGFGSKIIITTRDKHLLATHGIVKVYEVRQ 377

Query: 289 LVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESA 348
           L    A +LF   AF        ++++  +A+ Y +G+PLAL+V+G  L G+S  V +S+
Sbjct: 378 LKDEKALELFSWHAFKDKKNYPGYVDIAKRAVSYCEGLPLALEVIGSQLFGKSLVVCKSS 437

Query: 349 MRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACF--------------LEGEHRDEV 394
           + K E +   +I  +LKISYD L++ +K +FLDIACF              L G H ++ 
Sbjct: 438 LDKYERVLPKDIHAILKISYDDLEEDEKGIFLDIACFFNSSEIGYVKEILYLHGFHAEDG 497

Query: 395 ISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           I      KSL+ +D    +RMHDL++DMGREIVR+ES   PG+R+RLW   DI  VL++N
Sbjct: 498 IQQL-TDKSLMKIDTNGCVRMHDLIQDMGREIVRQESTLEPGRRSRLWFSDDIVHVLEEN 556

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRH 514
            GT+ IE I  D  +  R++     AF +M  L+ L           S    V  + +R 
Sbjct: 557 KGTDTIEVIIADFCEA-RKVKWCGKAFGQMKNLKILII----GNAQFSRDPQVLPSSLRL 611

Query: 515 LEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM 572
           L+W      +L  +   + L+ L +  + ++++         SL  F+T I  +  DCK 
Sbjct: 612 LDWHGYQSSSLPSDFNPKNLIILNLAESCLKRV--------ESLKVFETLIFLDFQDCKF 663

Query: 573 LERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           L  +P                     SL R+  +  L L   +NL RI ES+  L+KL  
Sbjct: 664 LTEIP---------------------SLSRVPNLGSLCLDYCTNLFRIHESVGFLAKLVL 702

Query: 633 LFISHCERLQTLPELPC----NLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKL 686
           L    C +L  L  +PC    +L  L  R C+ LE  P  L  M ++  +Y++  N  +L
Sbjct: 703 LSAQGCTQLDRL--VPCMNLPSLETLDLRGCSRLESFPEVLGVMENIKDVYLDETNLYEL 760

Query: 687 DPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPK 723
            P  +  +V       SL+  R  K+++  P   +PK
Sbjct: 761 -PFTIGNLVG----LQSLFLRR-CKRTIQIPSYVLPK 791


>gi|255561520|ref|XP_002521770.1| conserved hypothetical protein [Ricinus communis]
 gi|223538983|gb|EEF40580.1| conserved hypothetical protein [Ricinus communis]
          Length = 465

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 183/436 (41%), Positives = 258/436 (59%), Gaps = 42/436 (9%)

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            VG++  IE +ESLLC+GS  V  + IWG+ GI K TIA AVF +    F+  YF  NVR
Sbjct: 6   FVGIDSRIERVESLLCLGSSDVSIVGIWGMAGIGKTTIAEAVFKRNVASFDTCYFFANVR 65

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------- 261
           E  E  G   L+ +LLS++    + R    + NRL+  K  IV DDV S           
Sbjct: 66  EESEKHGSLHLRTQLLSKICGKAHFRRFTYRKNRLSHGKALIVLDDVNSSLQMQELLVEG 125

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GS+VI+T+RD+QVLKN   ++ Y +  L   +A +LF    F  +H     ++L
Sbjct: 126 RHLFGEGSKVIVTSRDRQVLKNG-VDEIYEVDGLNLNEALQLFSINCFNQNHPLEEFMQL 184

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + + I YA+G PLALKVLGC+L  +SK+ WE A+ KL+   ++ ++ VL++SYD L+   
Sbjct: 185 SKRVIYYAKGNPLALKVLGCFLLDKSKQDWEIALDKLKRTSNIGMKNVLRLSYDGLEIED 244

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           K +FLDIACF +GE    V  I D               KSLI +    ++ MHDL+++M
Sbjct: 245 KEIFLDIACFFKGEDVCFVERILDGCGFYVDIGLNNLVDKSLITVS-NGKLWMHDLIQEM 303

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G E V++ES   PG+R+RLWHH+DIY VL KNTGT+A+EGI+LD+++  RE+H+ S AF 
Sbjct: 304 GWETVQQESTGEPGERSRLWHHEDIYHVLTKNTGTKAVEGITLDLSET-RELHLTSEAFK 362

Query: 483 KMPKLRFLRFYGD--KNKCMVSHL--EGVPF--AEVRHLEWPQCPLKTL--NICAEKLVS 534
           KM  LR L+F+    ++ C V H   EG+ F   ++R+L W + P K+L  N   E LV 
Sbjct: 363 KMYNLRLLKFHDSDFEDFCKV-HFPDEGLSFHSNKLRYLHWYKYPSKSLPYNFSPENLVE 421

Query: 535 LKMPCTKVEQLWDDVQ 550
           L +P + VEQLW  VQ
Sbjct: 422 LNLPRSNVEQLWQGVQ 437


>gi|297794599|ref|XP_002865184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311019|gb|EFH41443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1750

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 210/628 (33%), Positives = 324/628 (51%), Gaps = 80/628 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRG D R  F SH    L LKSIK F D ++ R  +I+  L+  I  S IA+++
Sbjct: 9   YDVFPSFRGADVRKTFLSHFLKELDLKSIKPFKDSEIERSHSIAPELIQAIRGSRIAVVV 68

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
           FSE YA+S+W                      FY +DP HVRKQ   FG  F +    + 
Sbjct: 69  FSENYATSKWCLDELVEILKCKEELGQIVIPIFYDLDPFHVRKQLGKFGEAFKNTCLNKT 128

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             +++ W+ AL + A+L G+ S+    E K+IE+I +D+  +L+ T        VG+   
Sbjct: 129 KNEIQLWRQALNDVANLLGYHSHTCNNEPKMIEDIVSDIFHKLNETPSKDFDNFVGINNH 188

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           I E+  LLC+  E    + IWG  GI K TIA A+FN ++RHF+G  F      ++   G
Sbjct: 189 IAEMNLLLCLEYEEARMVGIWGPSGIGKTTIARALFNLLARHFQGKAFIDRAFVSKSIEG 248

Query: 220 IK-----------DLQKKLLSE-LSKDGNMRNIESQLNRLARKKVRIVFDDVT------- 260
            +            LQ   LSE L K+  + ++ +   RL  +KV I+ DD+        
Sbjct: 249 YRRAKTGDHNMKLSLQGSFLSEILGKNIKIEHLGALRERLKHRKVLIIIDDLDDLVVLEA 308

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGSR+I+ T+DK +L+    +  Y++       A ++FC+ AF  +     
Sbjct: 309 LAGQTQWFGSGSRIIVVTKDKHLLEAHGIDHIYKVGFPSEKQALEMFCRSAFSQNSPPDG 368

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +EL  +   ++ G+PL L +LG  + GR+KE W   + +L   P+ +I E L+ SYD L
Sbjct: 369 FMELASEVAAFSGGLPLGLVILGKVVKGRNKEDWIDMLPRLRKSPNRDIVETLRFSYDEL 428

Query: 372 DDSQ-KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYR----I 413
           D  + K +   IAC   G   + +  +               A KSLIN+   +     +
Sbjct: 429 DSEEDKAILRHIACLFNGVDVNNIKMMLSDSELDVNIGLKNLADKSLINVVPSWNNTNIV 488

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MH L+++MGR++VRK+S + PGKR  L + KDI  VL+  TGTE + GISLD+++V ++
Sbjct: 489 EMHCLVQEMGRDVVRKQS-DKPGKREFLMNSKDICDVLRGCTGTEKVLGISLDIDEV-KK 546

Query: 474 IHMNSYAFSKMPKLRFLRFYG---DKNKC----MVSHLEGVPFAEVRHLEWPQCPLKTL- 525
           + ++  AF  M  LRFL+FY    ++ K     +    +  P  +++ L WP  P++ + 
Sbjct: 547 VRIHKNAFDGMTNLRFLKFYKSSLERKKGFRWDLPERFDDFP-DKLKLLSWPGYPMRCML 605

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRL 552
            N C E LV L+MP +K+E+LW+ V+ L
Sbjct: 606 SNFCPEYLVELRMPNSKLEKLWEGVELL 633



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 192/384 (50%), Gaps = 52/384 (13%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            YDVF SFRG D R  F SH    L LKSIK F D ++ R  +I+  L+  I  S IA+++
Sbjct: 755  YDVFPSFRGADVRKTFLSHFLKELDLKSIKPFKDSEIERSHSIAPELIQAIRGSRIAVVV 814

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRKR 98
            FSE YA+S+W                      FY +DP HVRKQ   FG  F +  L K 
Sbjct: 815  FSENYATSKWCLDELVEILKCKEELGQIVIPIFYALDPFHVRKQLGKFGEAFKKTCLNKT 874

Query: 99   FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              E+ + W+ ALT+ A+L G+ S+    E+K+IE+I +D+  +L+ T        VG+  
Sbjct: 875  EDER-QLWRQALTDVANLLGYHSHTCNSEAKMIEDIVSDIFHKLNETPSKDFDNFVGINN 933

Query: 159  SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREAE 215
             I E+  LLC+ SE    + IWG  GI K TIA A+FN +SRHF+G  F   A   +  E
Sbjct: 934  HIAEMNLLLCLESEEARMVGIWGPSGIGKTTIARALFNLLSRHFQGKAFIDRAFVSKSIE 993

Query: 216  ETGGIK--------DLQKKLLSE-LSKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
               G K         LQ   LSE L K+  + ++ +   RL  +KV I+ DD+       
Sbjct: 994  GYRGAKTGDHNMKLSLQGSFLSEILGKNIKIEHLGALRERLKHRKVLIIIDDLDDLVVLE 1053

Query: 261  ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      SGSR+I+ T+DK++L+    +  Y++       A ++FC+ AF       
Sbjct: 1054 ALAGQTQWFGSGSRIIVVTKDKRLLEAHGVHHIYKVCFPSEKQALEMFCRSAFTQSSPPD 1113

Query: 311  SHIELTDKAIKYAQGVPLALKVLG 334
              +EL  +    +  +PL L +LG
Sbjct: 1114 GFMELASEVAACSGRLPLGLVILG 1137



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 129/288 (44%), Gaps = 59/288 (20%)

Query: 456  GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG---DKNKC----MVSHLEGVP 508
            GTE + GISLD+++V +++ ++  AF  M  LRFL+FY    ++ K     +       P
Sbjct: 1139 GTEKVLGISLDIDEV-KKVRIHKNAFDGMTNLRFLKFYKSSLERKKGFRWDLPERFNDFP 1197

Query: 509  FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP------------- 553
              +++ L WP  P++ +  N C E LV L+MP +KVE+LW+ V+ L              
Sbjct: 1198 -DKLKLLSWPGYPMRCMPSNFCPEYLVELRMPNSKVEKLWEGVELLTCLKHMDFSESENL 1256

Query: 554  ---SSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
                 L T     T  +  C  L  L D   N+  L +  T+I + P  L  L  +  L 
Sbjct: 1257 REIPDLSTATNLDTLVLNGCSSLVELHDISRNISKLNLSQTSIVKFPSKL-HLEKLVELY 1315

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP------------CN-------- 650
            +    N ER  E ++ L  L  +  S C  L+ LP+L             C+        
Sbjct: 1316 MGQTKN-ERFWEGVQPLPSLKKIVFSGCANLKELPDLSMATRLETLNLSDCSSLAEVTLS 1374

Query: 651  -------LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
                   L +L    C+SLE LP G+ ++ S+  +NL  C+ L+  PN
Sbjct: 1375 TIQNLNKLMILDMTRCSSLETLPEGI-NLPSLYRLNLNGCSRLRSFPN 1421


>gi|357500293|ref|XP_003620435.1| Resistance protein [Medicago truncatula]
 gi|355495450|gb|AES76653.1| Resistance protein [Medicago truncatula]
          Length = 1062

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 275/897 (30%), Positives = 427/897 (47%), Gaps = 173/897 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD +L RGD I+ SL   IE S I I 
Sbjct: 18  YQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFIDDSELQRGDEITPSLDNAIEESRIFIP 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS +                      F+ VDPSHVR    S+G   ++  +RF
Sbjct: 78  VFSANYASSSFCLDELVHIIHLYKQNGRLVLPVFFGVDPSHVRHHRGSYGEALAKHEERF 137

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIA--------NDVLKRLDAT 145
                  E++++WK ALT+AA+LSG D      E KL  +IA        +D  +R +  
Sbjct: 138 QHNTDHMERLQKWKIALTQAANLSG-DHRSPGYEYKLTGKIAFNQTPDLSSDCSQRYEYD 196

Query: 146 FQS------KNK----------GLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKI 188
           F         NK            VG +  I++++ LL   + +GV  + ++GIGG+ K 
Sbjct: 197 FIGDIVKYISNKINRVPLHVANYPVGFKFRIQQVKLLLDKETNKGVHMVGLYGIGGLGKS 256

Query: 189 TIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQ 243
           T+A A++N I   F+G  F  +VRE      +K LQ+KLL      E+  D     I   
Sbjct: 257 TLARAIYNFIGDQFDGLCFLHDVRENSAKNNLKHLQEKLLLKTIGLEIKLDHVSEGIPII 316

Query: 244 LNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMK 287
             RL RKK+ ++ DDV +                GSRVIITTRDK +L +      + ++
Sbjct: 317 KERLCRKKILLILDDVDNMNQLHALAGGLDWFGRGSRVIITTRDKHLLSSHGIKSTHAVE 376

Query: 288 ELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWES 347
            L   +A +L    AF  D + + + ++ ++A+ Y+ G+PL ++V+G  L G+S E W+S
Sbjct: 377 GLNGTEALELLRWMAFKSDKVPSGYEDILNRAVAYSSGLPLVIEVVGSNLFGKSIEKWKS 436

Query: 348 AMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------- 399
            +   + IP+ EI+++LK+SYD+L++ +++VFLDIAC  +G    +V  I          
Sbjct: 437 TLDGYDKIPNKEIQKILKVSYDALEEEEQSVFLDIACCFKGCGWADVKDILHAHYGHCIT 496

Query: 400 ------ASKSLIN-LDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
                 A KSLI+  +    + +HDL+ DMG+E+VR+ES   PG+R+RLW   DI   L 
Sbjct: 497 HHLEVLAEKSLIDRWEYDGCVGLHDLIEDMGKEVVRQESPKEPGERSRLWCQDDIVHALN 556

Query: 453 KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEV 512
           +NTGT  IE I ++ + +   I     AF KM KL+ L     +N    + L+ +P + +
Sbjct: 557 ENTGTSKIEMIYMNFHSMESVIDQKGMAFKKMTKLKTLII---ENGHFSNGLKYLPNS-L 612

Query: 513 RHLEWPQC--PLKTLNICAEKLVSLKM----PCTKVEQLWD-----DVQRLPSSLCTFKT 561
           R L+W  C     + +I ++K  ++K+     C  +  + D     ++++     C    
Sbjct: 613 RVLKWKGCLLESLSSSILSKKFQNMKVLTLDDCEYLTHIPDVSGLSNIEKFSFKFCRNLI 672

Query: 562 PITFEI-----------IDCKMLERLPD-ELENLEYLTVK-GTTIRELPESLGRLSWVKR 608
            I   I           I C  L+R P   L +L+ L +    ++   PE L +++ +KR
Sbjct: 673 TIDDSIGHQNKLEFISAIGCSKLKRFPPLGLASLKELELSFCVSLNSFPELLCKMTNIKR 732

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--------LPCNLGLLSARNCT 660
           ++  N S +  +P S ++LS+L  + I  C  L+  P+        +  N+  LS +NC 
Sbjct: 733 ILFVNTS-IGELPSSFQNLSELNDISIERCGMLR-FPKHNDKINSIVFSNVTQLSLQNCN 790

Query: 661 -SLEKLPAGLSSMSSVLYVNL---------------CNFLKL--------------DPNE 690
            S E LP  L    +V  ++L               C+ +K+               P  
Sbjct: 791 LSDECLPILLKWFVNVKRLDLSHNFNFNILPECLNECHLMKIFEFDCCKSLEEIRGIPPN 850

Query: 691 LSEI-----------VKDGWMKHSLYEERGIKKSMYFPG--NEIPKWFRHQSMGSSA 734
           L E+            +       L+E  G +   YFP   + IP WF HQ  G S 
Sbjct: 851 LEELSAYKCESLSSSSRRMLTSQKLHEAGGTE--FYFPNGTDGIPNWFEHQIRGQST 905


>gi|227438191|gb|ACP30585.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1301

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 233/725 (32%), Positives = 362/725 (49%), Gaps = 90/725 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R  F SH    L+ K I  F D+++ R  ++   L   I+ S IA++I
Sbjct: 15  YDVFPSFSGEDVRKTFLSHFMKELNRKLITAFKDNEIERSRSLDPELRQAIKDSRIAVVI 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
           FS  YASS W                      FY +DPSHVRKQ+  FG+ F +  + + 
Sbjct: 75  FSTNYASSSWCLNELLEIVRCKEECAQMVIPVFYGLDPSHVRKQTGDFGKIFDKTCQNKT 134

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            +++  W+ ALT+ A++ G+ S     E+++I+EIANDVL +L+ +   + +  VG+E  
Sbjct: 135 EDEIILWREALTDVANILGYHSVTWDNEARMIDEIANDVLGKLNVSPSYEVEDFVGIEDH 194

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA--------LNV 211
           I  + SLL   SE V  + IWG  GI K TIA A+F+++SR F+ S F         ++V
Sbjct: 195 IRAMSSLLEFESEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQSSAFVDKVFISKNMDV 254

Query: 212 REAEETGGIK---DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
                 G       LQ+  L+EL  ++D  + +I +    L  +K  I  DD+       
Sbjct: 255 YRGANLGDYNMKLHLQRAFLAELLDNRDIKIDHIGAVEKMLRHRKALIFIDDLDDQDVLD 314

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     SGSR+I+ T+DK  L+    +  Y +       A ++FC+ AF  +    
Sbjct: 315 ALAGRTQWFGSGSRIIVVTKDKHFLRAHGIDHIYEVCLPSKDLALEIFCRSAFRRNSPPD 374

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +EL  + +  A  +PL L VLG  L GR KE W   + +L      +IE  L+ SYD 
Sbjct: 375 GFMELASEVVFCAGNLPLGLDVLGSNLRGRDKEDWLDMLPRLRTSLDRKIERTLRASYDG 434

Query: 371 LDDSQ-KNVFLDIACFLEGEHRDEVISIFDASKSLINLDL------------FYRIRMHD 417
           L++ + K +F  +AC   G   D +  + +     +N+ L            F  + MH 
Sbjct: 435 LNNKKDKAIFRHVACLFSGRKVDHIKLLLEDRNLDVNIGLKNLVDKSLIHERFNTVEMHS 494

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL++MG+EIVR +S + PG+R  L   KDI+ VL+ NTGT+ + GI L M++ + E+H++
Sbjct: 495 LLQEMGKEIVRAQS-DEPGEREFLMDSKDIWDVLEDNTGTKRVLGIELIMDETD-ELHVH 552

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHL------EGVPFAEVRHLEWPQCPLKTL--NICA 529
             AF  M  LRFL  +G    C V  L      + +P   +R L W   P++ +      
Sbjct: 553 ENAFKGMCNLRFLEIFG----CNVVRLHLPKNFDYLP-PSLRLLSWHGYPMRCMPSKFQP 607

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           E L+ L M    +E+LW+ V  L    C  +  +T  +     L+ +PD  +  NLE L 
Sbjct: 608 ENLIKLVMRAGNLEKLWEGVASLT---CLKEIDLTLSV----NLKEIPDLSKAMNLERLC 660

Query: 588 VK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           +   +++ ELP S+  L  ++ L ++  +NLE IP  I +L+      +S C RL+  PE
Sbjct: 661 LDFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGI-YLNSFEGFVLSGCSRLRRFPE 719

Query: 647 LPCNL 651
           +  N+
Sbjct: 720 ILTNI 724



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 60/271 (22%)

Query: 535 LKMPCTKVEQLWDDVQR-------------------LPSSLCTFKTPITFEIIDCKMLER 575
           L M   + E LW+ VQ+                   LPSS          +I +C  LE 
Sbjct: 736 LNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLVELPSSFQNLNKLKWLDIRNCINLET 795

Query: 576 LPD--ELENLEYLTVKG---------------------TTIRELPESLGRLSWVKRLILS 612
           LP    L++LEYL + G                     + I E+P  + + S +K L ++
Sbjct: 796 LPTGINLQSLEYLVLSGCSRLRSFPNISRNIQYLKLSFSAIEEVPWWVEKFSALKDLNMA 855

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
           N +NL RI  +I  L  L     S+C  L T      +  +L+    T    LP    S+
Sbjct: 856 NCTNLRRISLNILKLKHLKVALFSNCGAL-TEANWDDSPSILAIATDTIHSSLPDRYVSI 914

Query: 673 SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGS 732
           + + +    N    D                L++++ +   +   G  +P +F H++ G+
Sbjct: 915 AHLDFTGCFNLDHKD----------------LFQQQTVFMRVILSGEVVPSYFTHRNNGT 958

Query: 733 SATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
           S T     P  +     +    CA+     F
Sbjct: 959 SLT-NIPLPHISPSQPFLRLKACALFDIATF 988


>gi|302398845|gb|ADL36717.1| HD domain class transcription factor [Malus x domestica]
          Length = 561

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 193/517 (37%), Positives = 285/517 (55%), Gaps = 64/517 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L+     TF  DD+L RG++I   L   I  S ++++
Sbjct: 22  YDVFLSFRGEDTRRTFTDHLYTALNNAGFLTFRDDDELERGEDIKPGLQKAIRQSRMSVV 81

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRK- 97
           +FS+ YASSRW                       FY VDPSH RKQ+ S G+ F+R  K 
Sbjct: 82  VFSKDYASSRWCLDELVMILERKRTTSDHVVLPVFYDVDPSHARKQTGSIGKAFARHEKT 141

Query: 98  RFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           + P K++  + AL + ADL+G    +   R +SK I +I   +  +L  T       L+G
Sbjct: 142 QSPSKVRGRREALAQLADLAGMVLSNQADRYKSKFITKIVKVIGDKLIRTPLGVESNLIG 201

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++  ++ I   L  GS  V  + + G+ GI K TIA  V+N     FEGS F  N+RE A
Sbjct: 202 IQSRVKRINLWLQDGSTDVGIVAVHGMSGIGKTTIAKYVYNSNFTSFEGSSFVENIRETA 261

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDVT-------- 260
            +  G+  +Q +LL ++   K+  + N+   ++++ R    ++V +V DD+         
Sbjct: 262 SQPNGLVQMQMQLLYDILKGKEEKVHNVSEGISKIVRAISSRRVLLVLDDIDHMDQLDAV 321

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS++IITTR +++LK     K + ++ L Y ++ +L    AFG DH    +
Sbjct: 322 LRMKDRFYPGSKIIITTRHERLLKVHQVTKVHGVETLDYDESLELLSWHAFGQDHPPEGY 381

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL- 371
           +E + K +++  G+PLAL+VLG  L G S  VWESA+ KL++IP+ EI   L+ISYDSL 
Sbjct: 382 MEYSKKLVQHTGGLPLALQVLGSSLLGESMGVWESALEKLKVIPNGEIMNKLRISYDSLQ 441

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           DD  + +FL IACFL G  ++ ++ I D               + L+ +D   ++ MHDL
Sbjct: 442 DDHDRKLFLHIACFLIGRDKNYIVRILDGCDFYTTVGIQNLIDRCLVKIDEDKKVNMHDL 501

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           +RDMGREIVR ES   P KR+RLW  KD +QVL++ T
Sbjct: 502 IRDMGREIVRLES-EEPEKRSRLWRCKDSFQVLREKT 537


>gi|357440369|ref|XP_003590462.1| Disease resistance-like protein [Medicago truncatula]
 gi|355479510|gb|AES60713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1035

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 246/774 (31%), Positives = 373/774 (48%), Gaps = 139/774 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VFLSFRG DTRD FT HL+                 +   I+ SLL  IE S I I +
Sbjct: 16  YQVFLSFRGSDTRDGFTGHLY-----------------KEKKITPSLLKAIEESRIFIPV 58

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YASS +                      F+ VDP+ VR  + S+G   ++  +RF 
Sbjct: 59  FSTNYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVDPTDVRYHTGSYGEELAKHGERFQ 118

Query: 101 ------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 E++ +WK ALT+AA+LSG+  +    E K I++I  D+  R++  F    K  V
Sbjct: 119 NNKKNMERLHQWKIALTQAANLSGYHYSP-GYEYKFIQKIIKDISDRINRVFLHVAKYPV 177

Query: 155 GVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G++  ++++  LL  G  + V  + ++GIGG+ K T+A A++N I+  FEG  F  +VRE
Sbjct: 178 GLQDQVQQVNLLLDKGYDDEVHMVGLYGIGGLGKSTLAKAIYNFIADQFEGLCFLEDVRE 237

Query: 214 AEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
                 +K LQ+KLL      ++   G    I     RL RKK+ ++ DDV         
Sbjct: 238 ISTPYNLKHLQEKLLLKTVGLDIKLGGVSEGIAIIKQRLCRKKILLILDDVDKLEQLEAL 297

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VIITTR+K +L        + +K L    A +L    AF  + + +S+
Sbjct: 298 AGGLDWFGRGSKVIITTREKHLLTCHGIESTHAVKGLYVTKALELLRWMAFKHNKVPSSY 357

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            ++ ++A+ YA G+PL ++++G  L G+S E W+  +   E IP+ +I+E+ K+SYD+L+
Sbjct: 358 DDVLNRAVSYASGLPLVIEIVGSNLFGKSIEEWKGTLDGYEKIPNKKIQEIFKLSYDALE 417

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
           + +++VFLDIAC  +G    EV  I  A               KSLI ++  Y + +HDL
Sbjct: 418 EDEQSVFLDIACCFKGYRLTEVEKILHAHYGHCIKHHVGVLVEKSLIEINTQY-VTLHDL 476

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + D G+EIVRKES   PG+RNRLW H DI  VL+KNTGT  IE I  +   +   I  N 
Sbjct: 477 IEDTGKEIVRKESRKEPGERNRLWCHNDIVHVLQKNTGTGNIEMIYWNYPSMEPIIDWNR 536

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT-----LNICAEKLV 533
            AF KM  L+ L     KN       + +P + +R L W     K+     LN   E + 
Sbjct: 537 KAFKKMSNLKTLII---KNGQFSKSPKYLP-STLRVLIWEGYNAKSLSSSFLNKKFENMK 592

Query: 534 SLKMPCTKVEQLWDDVQRLPS----------SLCTFKTPITF----EIID---CKMLERL 576
            L +   +      DV  LP+          +L T    I +    E++D   C  LE  
Sbjct: 593 VLTLNFCEYLTHIPDVSHLPNLEKFSFAYCDNLITIHNSIGYLNKLEVLDAEGCSKLESF 652

Query: 577 P-------------------------DELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           P                          ++ N+E + ++GT+IRELP S   LS ++ L L
Sbjct: 653 PPLQLTCLKELKLSECESLKSFPELLGKMTNIEEIWLRGTSIRELPFSFQNLSELRDLAL 712

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
           S  S + R   +I  +  L+ ++   C  L     LP +  +LS+   +++E L
Sbjct: 713 S-KSGILRFSSNIFMMPTLSKIYARGCRLL-----LPKHKDILSSTVASNVEHL 760


>gi|315507079|gb|ADU33175.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus var. hardwickii]
          Length = 1037

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 239/732 (32%), Positives = 362/732 (49%), Gaps = 108/732 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR NFTSHL+  L  + I  FID +L RG+ I  SLL  IE S I+I++
Sbjct: 17  FDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEICASLLEAIEGSKISIVV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS W                      FY+VDPS V KQS  FG  F++L  RF 
Sbjct: 77  ISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQSGRFGEEFAKLEVRFF 136

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD-ATFQ-SKNKGLVGVEC 158
            KM+ WK AL   + +SG+       E+ LI+ I  +V K+LD AT Q    K  VG++ 
Sbjct: 137 NKMQAWKEALITVSHMSGWPVLQRDDEANLIQNIVQEVWKKLDRATMQLDVAKYPVGIDI 196

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE-ET 217
            +  +  L  + S G+    ++G+GG+ K TIA A++NKI+  FEG  F  N+REA  + 
Sbjct: 197 QVRNL--LPHVMSNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQY 254

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS---------- 261
           GG+   QK+LL E+  D ++      R I    NRL  KK+ ++ DDV            
Sbjct: 255 GGLVQFQKELLCEILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDKREQLQALAGG 314

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GS+VI TTR+KQ+L     +K   +  L Y +A +LF    F   H    ++EL
Sbjct: 315 HDWFGHGSKVIATTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLEL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL--EIIPHV---EIEEVLKISYDS 370
           + +A+ Y +G+PLAL+VLG +L         S  +++  E   H    +I++ L+ISYD 
Sbjct: 375 SKRAVDYCKGLPLALEVLGSFLNSIGD---PSNFKRILDEYEKHYLDKDIQDSLRISYDG 431

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           L+D      +++                    SL+ +  F R+ MH++++ MGR I   E
Sbjct: 432 LEDEGITKLMNL--------------------SLLTIGRFNRVEMHNIIQQMGRTIHLSE 471

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
           + +   KR RL    D   VL  N    A++ I L+  K  + + ++S AF K+  L  L
Sbjct: 472 T-SKSHKRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTK-LDIDSRAFDKVKNLVVL 529

Query: 491 RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE---QL 545
              G+      S LE +P + +R + WPQ P  +L      E L+ LK+P + ++   Q 
Sbjct: 530 EV-GNATSSESSTLEYLP-SSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQG 587

Query: 546 WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGR 602
           +   +RL              + D  +L  +PD     NL+YL + G   + ++ ES+G 
Sbjct: 588 YMSCERLKE----------INLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGS 637

Query: 603 LSWVKRLILSNN-SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTS 661
           LS +  L  S++    E+ P  ++ L  L FL + +C   +  P+         +    S
Sbjct: 638 LSKLVALHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQF--------SEEMKS 688

Query: 662 LEKLPAGLSSMS 673
           +E L  G S+++
Sbjct: 689 IEYLSIGYSTVT 700



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLE-------RLPDELENLEYLTVKGTTIRELPESL 600
           ++  LPS++       +  ++D  +          LP  L  L  L + G  I  L + L
Sbjct: 723 ELTTLPSTIYRLTNLTSLTVLDSNLSTFPFLNHPSLPSSLFYLTKLRLVGCKITNL-DFL 781

Query: 601 GRLSWV----KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
             + +V    K L LS N N  R+P  I +   L +L+   CE L+ + ++P  +  +SA
Sbjct: 782 ETIVYVAPSLKELDLSEN-NFCRLPSCIINFKSLKYLYTMDCELLEEISKVPKGVICMSA 840

Query: 657 RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF 716
               SL + P            NL  F+  D +   E  K G +K            +  
Sbjct: 841 AGSISLARFPN-----------NLAEFMSCDDS--VEYCKGGELKQ-----------LVL 876

Query: 717 PGNEIPKWFRHQSMGSSATL 736
               IP W+R++SM  S T 
Sbjct: 877 MNCHIPDWYRYKSMSDSLTF 896


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 258/825 (31%), Positives = 392/825 (47%), Gaps = 159/825 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG DTR+NFT HL   L  K I +FIDD+L RGD+I+ +L   IE S IAI++
Sbjct: 15  FDVFLSFRGADTRNNFTGHLQDKLLGKGIDSFIDDRLRRGDDIT-ALFDRIEQSKIAIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA+S W                       Y++D S ++    +      R      
Sbjct: 74  FSENYANSVWCLRELVKILQCRDRNQQLVIPILYKIDKSKLKNVRKT------RFTGVTE 127

Query: 101 EKMKRWKNALTEAADLSGFDSN-VIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           +++  W+ A++ A D+SG+  +     E+KL+ +IA D  K+L+      N GLVG+E  
Sbjct: 128 DEIVSWEAAISTAVDISGYVVDRYSTSEAKLVNDIAFDTFKKLNDLAPIGNTGLVGIESR 187

Query: 160 IEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           ++ +E LL C   + V  + I G+GGI K T+A  ++ ++   F+G  F  N+RE     
Sbjct: 188 LKTLEKLLSCHELDYVHVIGIIGMGGIGKTTLADCLYERMRGMFDGCCFLANIRENSGRS 247

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQL------NRLARKKVRIVFDDVT------------ 260
           GI+ LQK+L S L  D  ++             RL  K++ IV DDV             
Sbjct: 248 GIESLQKELFSTLLDDRYLKTGAPASAHQRFHRRLKSKRLLIVLDDVNDEKQIKYLMGHC 307

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+IITTRD +++K     +KY + +L   +A KLFC  AF G         LT
Sbjct: 308 KWYQGGSRIIITTRDSKLIKG----QKYVLPKLNDREALKLFCLNAFAGSCPLKEFEGLT 363

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +  + YA+G PLALKVLG  L   +K  WE+ +  L+   H +I EVL+ SY+ L + QK
Sbjct: 364 NMFLDYARGHPLALKVLGSDLRDMNKLFWEAKLDLLKSKSHGDIYEVLETSYEELSNDQK 423

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS----KSLINLDLF---------YRIRMHDLLRDMG 423
           ++FLDIACF   E  D V S+  +      SLI  DL           RI MHD+L+ MG
Sbjct: 424 DIFLDIACFFRSEKVDYVTSLLSSRGVDVSSLIQ-DLVDKCLITRSDNRIEMHDMLQTMG 482

Query: 424 REI-----------VRKESINHPGK--RNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
           +EI           VR  S + P      RLW  +DI  +L K  GTE I GI LD +K 
Sbjct: 483 KEISFKPEPIGIRDVRWLSKHRPQHHWHLRLWDSEDICDMLTKGLGTEKIRGIFLDTSKR 542

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDK-----NKCMVSHLEGVPFA--EVRHLEWPQCPLK 523
            + + +   AF  M  L++L+ Y  +           H +G+ F   E+ +L W   PL+
Sbjct: 543 GK-LRLRPDAFKGMYNLKYLKIYDSRCSRGCEAVFKLHFKGLDFLPDELAYLHWHGFPLQ 601

Query: 524 --TLNICAEKLVSLKMPCTKVEQLWDD--------------------------------- 548
              L+   + LV LK+P +++E++W D                                 
Sbjct: 602 RFPLDFDPKNLVDLKLPHSELEEIWGDDKVAGMLKWVDLSHSSNLCRLLGLAKAHNLERL 661

Query: 549 -------VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL--------------------- 580
                  ++ LPSS+   +  +   + +C  L+ LP+E                      
Sbjct: 662 NLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETKSQSLQTLILSGCSSLKKFPL 721

Query: 581 --ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
             E++E L + GT I+ LP+S+   S +  L L N   L+ +  ++  L  L  L +S C
Sbjct: 722 ISESIEVLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELILSGC 781

Query: 639 ERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLC 681
            +L+  PE+  ++  L     + TS+ ++P  +  +S++   +LC
Sbjct: 782 SQLEVFPEIKEDMESLEILLLDDTSITEMP-NMKHLSNIKTFSLC 825



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 43/286 (15%)

Query: 615  SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
            +++E +PES   L  L +  + +C+ L++LP LP NL  L A  C SLE L   L+ ++ 
Sbjct: 879  NSIENLPESFNQLHNLKWFDLKYCKNLKSLPVLPQNLQYLDAHECESLETLANPLTPLTV 938

Query: 675  VLYVN----LCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-----------SMYFPGN 719
               ++      N  KL+ +    +V    +K  L     +K+            + FP  
Sbjct: 939  RERIHSMFMFSNCYKLNQDAQESLVGHARIKSQLMANASVKRYYRGFIPEPLVGVCFPAT 998

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF---LKYFRHK-SGE-D 774
            EIP WF +Q +G S  + + PP     N  +  AF  VV F  +    K F  K SG+ +
Sbjct: 999  EIPSWFFYQRLGRSLDI-SLPPHWCDTN-FVGLAFSVVVSFKEYEDCAKRFSVKFSGKFE 1056

Query: 775  DWDGNVYAVCCDWKRKSEGHLYSWF--LGKISY----VESDHVFLGCNS------FGGEY 822
            D DG+          +    L  W    G + +    + SDHVF+G NS        GE 
Sbjct: 1057 DQDGSF--------TRFNFTLAGWNEPCGTLRHEPRKLTSDHVFMGYNSCFQVKKLHGES 1108

Query: 823  FGPNYDEFSFRIHCS-FHFPPYLERGEVKKCGIHFVYAQDSADHIL 867
                Y + SF+ + +       LE  EV KCG+  VY  +  +  +
Sbjct: 1109 NSCCYTKASFKFYATDDEKKKKLEMCEVIKCGMSLVYVPEDDEECM 1154


>gi|297837791|ref|XP_002886777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332618|gb|EFH63036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1023

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 277/989 (28%), Positives = 450/989 (45%), Gaps = 164/989 (16%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YD+F SFRGED R NF  H    L  K I  F D+Q+ R  ++   L   I  S IA++
Sbjct: 16  VYDIFPSFRGEDVRKNFVCHFIKELDRKLITAFKDNQIERSRSLDPELKQAIRDSRIAVV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKR 98
           +FS+ YASS W                      FYR+DPSHVRKQ+  FG+ F +  + +
Sbjct: 76  VFSKNYASSSWCLDELLEIVRCKKEYGQLVIPIFYRLDPSHVRKQTGEFGKIFEKTCQHK 135

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +   RW  AL+  +++ G+ S     E+K+IEEI NDVL +L+ T        VG+E 
Sbjct: 136 TKQVQNRWSRALSHVSNILGYHSVTWENEAKMIEEITNDVLGKLNITPSKDFDDFVGMEG 195

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF----------- 207
            I E+ S LC+ SE V  + IWG  GI K TIA A+FN+++RHF GS F           
Sbjct: 196 HIAEMSSRLCLESEEVRMVGIWGPSGIGKTTIARALFNRLARHFRGSIFIDRSFLCKSTK 255

Query: 208 ALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---- 261
             +    ++      LQ   L E+    ++R  ++ +   RL  +KV I+ DD+      
Sbjct: 256 IYSKANPDDYNMRLHLQSNFLPEILGQKHIRIDHLGAVRERLKHQKVLILLDDLDDQVVL 315

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+I+ T++K +L+       Y +       A ++F ++AF  +   
Sbjct: 316 DTLVGQTQWFGRGSRIIVITKNKHLLRAHGICSFYEVGLPSDQLALEMFSRYAFRQNCPL 375

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
              IE + +  K    +PL L +LG YL GR KE W   + +L    + +IEE L++ Y+
Sbjct: 376 PGFIEFSVEVAKLVGNLPLGLNILGSYLRGRIKEDWIHRLHRLRKGLNKQIEEALRVEYE 435

Query: 370 SLDDSQ-KNVFLDIACFLEGEHRDEV--------ISIFDASKSLINLDLFYR----IRMH 416
            L   + K +F  IAC       +++        + +     +L++  L +     ++MH
Sbjct: 436 GLGSRKDKAIFRHIACLFNEVEINDIKLLLEDSDLDVITGLHNLLDNSLIHERRKTVQMH 495

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            L+++MG+E+VR +S N P KR  L   KDIY VL  N   E ++GIS ++  ++ E+H+
Sbjct: 496 CLVQEMGKEMVRIQSKN-PAKREFLVDSKDIYDVLNGNANAEKVKGISWNLADLD-ELHI 553

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSH-------LEGVPFAEVRHLEWPQCPLKTL--NI 527
           +  AF +M  L F+R Y D     +         L+ +P  ++R L W   P++ L  N 
Sbjct: 554 HKRAFERMKNLDFIRIYDDSLALHIQEKLHFPQGLDYLP-PKLRFLSWDGYPMRCLPSNF 612

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT 587
             E LV L+M  +K+E+LW+ V  LP  L       +  + +   L   P    NL  L 
Sbjct: 613 LPEHLVVLRMRNSKLEKLWNGVH-LPRLLEDMDMEGSSNLTELPDLSWAP----NLTTLN 667

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           ++   ++ E+P S+  L  +K L L + ++L  +P +I  +S L  L +S C R    P+
Sbjct: 668 LRNCPSLAEIPSSIMNLHCLKTLTLEDCTSLVSLPVNIDLIS-LYRLDLSGCSRFSRFPD 726

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSE----------- 693
           +  N+  L   N T++E++P  ++    ++ + +  C  LK     +SE           
Sbjct: 727 ISRNISFL-ILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGNISELKLLEKADFSN 785

Query: 694 ---IVKDGWMKHS------------------------LYEERGIKKSMY----FPGNEIP 722
              + K  W+  +                        L +E  I++S++     PG ++P
Sbjct: 786 CEALTKASWIGRTTVVAMVAENNHTKLPVLNFINCFKLDQETLIQQSVFKHLILPGEKVP 845

Query: 723 KWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGE--DDW---- 776
            +F +Q+ G+S  +     + +   + + F  C VV      K  R ++G     W    
Sbjct: 846 SYFTNQATGNSLVIHLL--QSSFSQEFLRFRVCLVVDAD---KPNRSENGSIASTWVSCH 900

Query: 777 ----DGNVYA-----VCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNY 827
               DGN Y      +  D  R+ + HL          +   H  L  ++  G     NY
Sbjct: 901 FTCKDGNCYGSADSRIAIDLPRQIDNHL---------IIFDCHFPLSKDN--GSLVNLNY 949

Query: 828 DEFSFRIHCSFHFPPYLERGEVKKCGIHF 856
           D+     H  F   P     ++K+CGI  
Sbjct: 950 DQVDLEFH--FASDPLC---KIKECGIRL 973


>gi|224123358|ref|XP_002319059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857435|gb|EEE94982.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 520

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 197/519 (37%), Positives = 282/519 (54%), Gaps = 66/519 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFT HL++ L    + TF D D L RG+ IS  LL  I  S I+I+
Sbjct: 1   HDVFLSFRGEDTRRNFTDHLYNALVQAGVHTFRDNDHLPRGEEISSQLLEAIRGSKISIV 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA+S W                      FY +DPS VRKQ  SF   F      F
Sbjct: 61  VFSKGYATSTWCLEELANIMGCRKKKHQVVLPVFYDIDPSDVRKQKRSFAEAFQTHEHFF 120

Query: 100 PEKMK---RWKNALTEAADLSGFDSNVI--RPESKLIEEIANDVLKRL-DATFQSKNKGL 153
            E M+   RW+ AL EA+ LSG+D N +  R ES  I  I  DVL +L         + L
Sbjct: 121 KEDMEKVNRWRKALREASTLSGWDLNTMANRHESDFIRNIVKDVLGKLCPKRLLYCPEHL 180

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG++  ++ I +LL I ++    + I G+GGI K T+A  +FN +   FEGS F   V +
Sbjct: 181 VGIDSHVDNIIALLRIVTDDSRIVGIHGMGGIGKTTLAKVLFNLLDCEFEGSTFLSTVSD 240

Query: 214 -AEETGGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVTS---- 261
            ++   G+  LQK+LL +  K  N+  I +          RL  K+V +V DDV +    
Sbjct: 241 RSKAPNGLVLLQKQLLCDTLKTKNIVTINNVDRGMILITERLRCKRVLVVLDDVDNEYQV 300

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS +++T+R++ +L     + KY  K L   ++ +LF + AFG  H   
Sbjct: 301 KALVGENRFGPGSVIMVTSRNEHLLNRFTVHVKYEAKLLTQDESLQLFSRHAFGTTHPPE 360

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            + EL++  +K A  +PLAL+VLG  L G++K  W SA+ KL   P  +++  LKISYD+
Sbjct: 361 DYAELSNDVLKCACALPLALEVLGASLFGKNKSEWRSAIEKLRKTPDHDVQAKLKISYDA 420

Query: 371 LDDS-QKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRM 415
           LDD   KN+FLDIACF  G +++ V +I  A               +SL+ ++L  ++RM
Sbjct: 421 LDDDILKNIFLDIACFFVGRNKEYVSTILHARYGFNQEINLTILVQRSLLEVNLQNQLRM 480

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           HDL+RDMGR IV +    HPGKR+R+W H++ ++VL  N
Sbjct: 481 HDLVRDMGRAIVYQMCPQHPGKRSRIWLHEEAWEVLNMN 519


>gi|6449046|gb|AAF08790.1| downy mildew resistance protein RPP5 [Arabidopsis thaliana]
          Length = 1361

 Score =  299 bits (765), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 256/806 (31%), Positives = 372/806 (46%), Gaps = 133/806 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  KSI TFID  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSHLLKALDGKSINTFIDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL----- 95
           FS+ YASS W                      FY VDPS VRKQ+  FG+ F +      
Sbjct: 72  FSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSK 131

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            K+  ++ +RW  ALT+ A+++G D      E+ ++E+I+NDV  +L  T        VG
Sbjct: 132 DKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSNKL-ITRSKCFDDFVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-GSYFALNVREA 214
           +E  IE I+S+LC+ S+    + IWG  GI K TI  A+F+++S  F   ++        
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFLTYKSTSG 250

Query: 215 EETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
            +  G+K   QK+LLSE+   KD  + +      RL  KKV I+ DDV            
Sbjct: 251 SDVSGMKLSWQKELLSEILGQKDIKIEHFGVVEQRLNHKKVLILLDDVDNLEFLKTLVGK 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+I+ T+D+Q+LK    +  Y +K      A K+  Q+AFG D       EL
Sbjct: 311 AEWFGSGSRIIVITQDRQLLKAHEIDLVYEVKLPSQGLALKMISQYAFGKDSPPDDFKEL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +  +    +PL L VLG  L GR K+ W   M +L      +IEE L++ YD L+   
Sbjct: 371 AFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKN 430

Query: 376 KNVFLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIV 427
           + +F  IACF  G           D+V     A +SLI +     I MH+LL  +GREI 
Sbjct: 431 RELFKCIACFFNGFKVSNVKELLEDDVGLTMLAEESLIRITPVGYIEMHNLLEKLGREID 490

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK--VNREIHMNSYAFSKMP 485
           R +S  +PGKR  L + +DI +VL + TGTE + GI L        R   ++  +F  M 
Sbjct: 491 RAKSKGNPGKRQFLTNFEDIREVLTEKTGTETLLGIRLPHPGYLTTRSFLIDEKSFKGMR 550

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
            L++L      +  +   L   P  +++ L W  CPLK L  N  AE LV L+M  +K+E
Sbjct: 551 NLQYLEIGYWSDGVLPQSLVYFP-RKLKRLWWDNCPLKRLPSNFKAEYLVELRMVNSKLE 609

Query: 544 QLWDDVQRLPS------------------SLC---------------TFKTPITFEI--- 567
           +LWD  Q L S                  SL                T  + I   I   
Sbjct: 610 KLWDGTQPLGSLKKMDLYNSYKLKEIPDLSLAINLEELNLEECESLETLPSSIQNAIKLR 669

Query: 568 ---------IDCKMLERLPDELENLEYLTVKGTTIRE-------LPESLGRLSW----VK 607
                    ID K LE +     NLEYL+V   + RE        P  L  + W    +K
Sbjct: 670 ELNCWGGLLIDLKSLEGMC----NLEYLSVPSWSSRECTQGIVYFPRKLKSVLWTNCPLK 725

Query: 608 RL-----------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLL 654
           RL           ++   S LE++ +  + L  L  + + +   L+ +P+  L  NL  L
Sbjct: 726 RLPSNFKAEYLVELIMEYSELEKLWDGTQSLGSLKEMNLRYSNNLKEIPDLSLAINLEEL 785

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNL 680
               C SL  LP+ + + + ++Y+++
Sbjct: 786 DLFGCVSLVTLPSSIQNATKLIYLDM 811



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 35/191 (18%)

Query: 529  AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
            +E+L  L +   K+E+LW+ +Q L S           ++ + + L+ LPD  +  NL+ L
Sbjct: 899  SEQLTFLNVSGCKLEKLWEGIQSLGSLE-------EMDLSESENLKELPDLSKATNLKLL 951

Query: 587  TVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             + G  ++  LP ++G L  ++RL ++  + LE +P  + +LS L  L +S C  L+T P
Sbjct: 952  CLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDV-NLSSLETLDLSGCSSLRTFP 1010

Query: 646  ELPCN----------------------LGLLSARNCTSLEKLPAGLSSMSSV--LYVNLC 681
             +  N                      L  L   NC SL  LP+ + ++ ++  LY+N C
Sbjct: 1011 LISTNIVCLYLENTAIEEIPDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMNRC 1070

Query: 682  NFLKLDPNELS 692
              L+L P +++
Sbjct: 1071 TGLELLPTDVN 1081



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 32/161 (19%)

Query: 511 EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEII 568
           +++ + W  CPLK L  N  AE LV L M  +++E+LWD  Q L S              
Sbjct: 713 KLKSVLWTNCPLKRLPSNFKAEYLVELIMEYSELEKLWDGTQSLGS-------------- 758

Query: 569 DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
               L+ +     NL Y       ++E+P+ L     ++ L L    +L  +P SI++ +
Sbjct: 759 ----LKEM-----NLRY----SNNLKEIPD-LSLAINLEELDLFGCVSLVTLPSSIQNAT 804

Query: 629 KLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPA 667
           KL +L +S CE L++ P +    +L  L    C +L   PA
Sbjct: 805 KLIYLDMSECENLESFPTVFNLKSLEYLDLTGCPNLRNFPA 845



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 10/134 (7%)

Query: 562  PITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLER 619
            P   + +DC ++  +P E   E L +L V G  + +L E +  L  ++ + LS + NL+ 
Sbjct: 880  PAGLDYLDC-LMRCMPCEFRSEQLTFLNVSGCKLEKLWEGIQSLGSLEEMDLSESENLKE 938

Query: 620  IPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPA--GLSSMSS 674
            +P+ +   + L  L +S C+ L TLP    NL     L    CT LE LP    LSS+ +
Sbjct: 939  LPD-LSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNLSSLET 997

Query: 675  VLYVNLCNFLKLDP 688
             L ++ C+ L+  P
Sbjct: 998  -LDLSGCSSLRTFP 1010



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 20/169 (11%)

Query: 539  CTKVEQLWDDVQRLP---------SSLCTF---KTPITFEIIDCKMLERLPD--ELENLE 584
            CT +E L  DV             SSL TF    T I    ++   +E +PD  +   LE
Sbjct: 980  CTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIPDLSKATKLE 1039

Query: 585  YLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
             L +    ++  LP ++G L  ++RL ++  + LE +P  + +LS L  L +S C  L+T
Sbjct: 1040 SLILNNCKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDV-NLSSLETLDLSGCSSLRT 1098

Query: 644  LPELPCNLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
             P +   +  L   N T++E++P  +   +  +VL +  C  LK + PN
Sbjct: 1099 FPLISTRIECLYLEN-TAIEEVPCCIEDFTRLTVLRMYCCQRLKNISPN 1146


>gi|240256307|ref|NP_197336.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005159|gb|AED92542.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1245

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 259/802 (32%), Positives = 386/802 (48%), Gaps = 110/802 (13%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
           VFLSFRGED R  F SH+      K I  F+D ++ RG +I   L   I  S IAI++ S
Sbjct: 22  VFLSFRGEDVRKGFLSHIQKEFERKGIFPFVDTKMKRGSSIGPVLSDAIIVSKIAIVLLS 81

Query: 64  ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           + YASS W                      FY VDPS VRKQ+  FG  F        E+
Sbjct: 82  KNYASSTWCLNELVNIMKCREEFGQTVMTVFYEVDPSDVRKQTGDFGIAFETTCVGKTEE 141

Query: 103 MKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K+ W+ AL + +++ G    +   ES LI++IA DVL  L+ T      G VG+   + 
Sbjct: 142 VKQSWRQALIDVSNIVGEVYRIWSKESDLIDKIAEDVLDELNYTMSRDFDGYVGIGRHMR 201

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA------- 214
           +++SLLC+ S  V  + I G  GI K TIA A+ ++IS +F+ + F  ++R         
Sbjct: 202 KMKSLLCLESGDVRMIGIVGPPGIGKTTIARALRDQISENFQLTAFIDDIRLTYPRRCYG 261

Query: 215 -----EETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS 261
                  T  + D      LQ   LSE+   KD  + N+ +  N L  +KV ++ DDV  
Sbjct: 262 ESGLKPPTAFMNDDRRKIVLQTNFLSEILNQKDIVIHNLNAAPNWLKDRKVLVILDDVDH 321

Query: 262 ----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                           GSR+IITT+D+++LK    +  Y +      DA ++FC  AFG 
Sbjct: 322 LEQLDAMAKETGWFGYGSRIIITTQDRKLLKAHNIDYIYEVGLPRKDDALQIFCLSAFGQ 381

Query: 306 DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLK 365
           +        L  +  + A  +PL LKVLG YL G S E W++A+ +L+     +IE+ L+
Sbjct: 382 NFPHDDFQYLACEVTQLAGELPLGLKVLGSYLKGMSLEEWKNALPRLKTCLDGDIEKTLR 441

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYR 412
            SYD+L    + +FL IAC   G     V      S             KSLI++D+ + 
Sbjct: 442 YSYDALSRKDQALFLHIACLFRGYEVGHVKQWLGKSDLDVDHGLDVLRQKSLISIDMGF- 500

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVN 471
           + MH LL+ +G EIVR +S   P +R  L    DI  V   NT GT++I GI L++ ++ 
Sbjct: 501 LNMHSLLQQLGVEIVRNQSSQEPRERQFLVDVNDISDVFTYNTAGTKSILGIRLNVPEIE 560

Query: 472 REIHMNSYAFSKMPKLRFL---RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--N 526
            +I ++   F  M  L+FL     +GDK   +   L  +P  ++R L W  CPL+     
Sbjct: 561 EKIVIDELVFDGMTNLQFLFVNEGFGDK-LSLPRGLNCLP-GKLRVLHWNYCPLRLWPSK 618

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE 584
             A  LV L M     E+LW+ +  LP      K+    ++   K L+ +PD     NLE
Sbjct: 619 FSANFLVELVMRGNNFEKLWEKI--LP-----LKSLKRMDLSHSKDLKEIPDLSNATNLE 671

Query: 585 YLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            L +   + + EL +S+G+ + +KRL L+  S L+++P SI   + L  L + HCE  + 
Sbjct: 672 ELDLSSCSGLLELTDSIGKATNLKRLKLACCSLLKKLPSSIGDATNLQVLDLFHCESFEE 731

Query: 644 LPELP---CNLGLLSARNCTSLEKLPAGLS-------SMSSV-------LYVNL--CNFL 684
           LP+      NL +L    C  L  LP  +        SMS          Y+NL  C  L
Sbjct: 732 LPKSIGKLTNLKVLELMRCYKLVTLPNSIKTPKLPVLSMSECEDLQAFPTYINLEDCTQL 791

Query: 685 KLDPNELSEIVKDGWMKHSLYE 706
           K+ P E+S  VK+  ++++  E
Sbjct: 792 KMFP-EISTNVKELDLRNTAIE 812



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 36/245 (14%)

Query: 616  NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
            + E IP+ I  L  L+ L +S C  L +LP+LP +L  L A NC SLE++     +    
Sbjct: 950  DFETIPDCINCLPGLSELDVSGCRNLVSLPQLPGSLLSLDANNCESLERINGSFQNPEIC 1009

Query: 676  LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSAT 735
            L  N  N + L+  E  ++++    ++++            PG E+P  F  Q    S T
Sbjct: 1010 L--NFANCINLN-QEARKLIQTSACEYAI-----------LPGAEVPAHFTDQDTSGSLT 1055

Query: 736  L----KTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKS 791
            +    KT P R       + +  C        L    + + ED+ + +  +V C    K 
Sbjct: 1056 INITTKTLPSR-------LRYKAC-------ILLSKGNINLEDEDEDSFMSVSCHVTGKQ 1101

Query: 792  EGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKK 851
               +       +    +DH+++   SF      P   E +F     F F  + +   VK 
Sbjct: 1102 NILILP---SPVLRGYTDHLYIFDYSFSLHEDFPEAKEATFS-ELMFDFIVHTKSWNVKS 1157

Query: 852  CGIHF 856
            CG+H 
Sbjct: 1158 CGVHL 1162


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 237/739 (32%), Positives = 372/739 (50%), Gaps = 121/739 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR NFTSHL+  L  + I TF+DD+ L  GD++S+ L+  I+ S +A+I
Sbjct: 23  YDVFLSFRGKDTRRNFTSHLYERLDNRGIFTFLDDKRLENGDSLSKELVKAIKESQVAVI 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+SRW                      FY VDPS VRKQ+ SF   F+    R+
Sbjct: 83  IFSKNYATSRWCLNEVVKIMECKEENGQLVIPVFYDVDPSDVRKQTKSFAEAFAEHESRY 142

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  +K++RW+ AL+EAADL G+D    R ES+ I E+ N++  +L  T  S    +
Sbjct: 143 KDDVEGMQKVQRWRTALSEAADLKGYDIRE-RIESECIGELVNEISPKLCETSLSYLTDV 201

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG++  ++++ SLL +  + V  + IWG+GG+ K TIA A+F+ +S  F+G+ F  + +E
Sbjct: 202 VGIDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNKE 261

Query: 214 AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDVT------- 260
            +    I  LQ  LLS+L   K+  + + E   + +AR    KKV +V D++        
Sbjct: 262 NKYE--IHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKY 319

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    +G+R+I TTRDK  ++    +  Y +  L+  DA +LF Q+AF  +  D  
Sbjct: 320 LAGDLGWFGNGTRIIATTRDKHFIRK--NDAVYPVTTLLEHDAVQLFNQYAFKNEVPDKC 377

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             E+T + + +A+G+PLALKV G  L  +   VW SA+ +++  P  ++ E LK+SYD L
Sbjct: 378 FEEITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYDGL 437

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           +   + +FLDIACFL G  + E+  I ++              KSL+ +  +  I+MHDL
Sbjct: 438 EREDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDL 497

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK-KNTGTEAIEGISLDMNKVNREIHMN 477
           +++MG+ IV  +     G+  RLW  +D  +    K  GT+AIE I +      +++   
Sbjct: 498 IQEMGKYIVTMQ--KDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWI---PEIQDLSFR 552

Query: 478 SYAFSKMPKLRFLRFY------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
             A   + KLR L         G  ++ + S+L    + +     W   P K      + 
Sbjct: 553 KKAMKDVEKLRILYINGFHTPDGSNDQYLPSNLR---WFDCCKYPWESLPAK---FDPDM 606

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           LV L +  + +  LW   ++ P            ++  C  L R PD  ++ NLEYL   
Sbjct: 607 LVHLDLQQSSLFHLWTGTKKFPFLR-------RLDLSSCANLMRTPDFTDMPNLEYLG-- 657

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
                                L   SNL+ +  S+R   KL  L +  C+ L++   + C
Sbjct: 658 ---------------------LEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESFSYV-C 695

Query: 650 --NLGLLSARNCTSLEKLP 666
             +L  L  + C++LEK P
Sbjct: 696 WESLECLHLQGCSNLEKFP 714



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 36/177 (20%)

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           NL Y  +K      LP+ +G LS ++ L L  N N E +P+S+  LS L  L +  C+ L
Sbjct: 854 NLSYCNLKDEG---LPQDIGSLSSLEVLNLRGN-NFEHLPQSLTRLSSLQSLDLLDCKSL 909

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
             LPE P  L  + A              S+ + L+ N+ +F                 +
Sbjct: 910 TQLPEFPRQLDTIYA---------DWNNDSICNSLFQNISSF-----------------Q 943

Query: 702 HSLYEERGIKKSMYFPGNE---IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
           H +     +  S+    NE   IP+WF HQ    S ++K  P      +  + FA C
Sbjct: 944 HDICASDSL--SLRVFTNEWKNIPRWFHHQGKDKSVSVKL-PENWYVCDNFLGFAVC 997


>gi|357499485|ref|XP_003620031.1| Resistance-gene protein [Medicago truncatula]
 gi|355495046|gb|AES76249.1| Resistance-gene protein [Medicago truncatula]
          Length = 813

 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 238/741 (32%), Positives = 367/741 (49%), Gaps = 122/741 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD  L RGD I+ SL   IE S I I 
Sbjct: 11  YQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIP 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YASS +                      F  VDP+ VR  +  +G   +  +K+F
Sbjct: 71  VFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKF 130

Query: 100 ------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++++WK AL++AA+LSG        E + I +I  D+  R+        K  
Sbjct: 131 QNDKDNTERLQQWKEALSQAANLSG-QHYKHGYEYEFIGKIVEDISNRISREPLDVAKYP 189

Query: 154 VGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  ++ ++  L   S+  V  + ++G GGI K T+A A++N I+  FE   F  NVR
Sbjct: 190 VGLQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVR 249

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
               +  +K LQ+KLL      ++   G  + I     RL RKK+ ++ DDV        
Sbjct: 250 VNSTSDNLKHLQEKLLLKTVRLDIKLGGVSQGIPIIKQRLCRKKILLILDDVDKLDQLEA 309

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTR+K +LK       + ++ L   +A +L  +W    +++ +S
Sbjct: 310 LAGGLDWFGPGSRVIITTRNKHLLKIHGIESTHAVEGLNATEALELL-RWMAFKENVPSS 368

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           H ++ ++A+ YA G+PLA+ ++G  L GRS +   S +   E IP+ EI+ +LK+SYDSL
Sbjct: 369 HEDILNRALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVSYDSL 428

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLIN-LDLFYRIRMH 416
           +  +++VFLDIAC  +G    EV  I  A               KSL++ L     + +H
Sbjct: 429 EKEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSYVTLH 488

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DL+ DMG+E+VR+ES + PG+R+RLW  +DI  VLKKNTGT  I+ I++    +  +I  
Sbjct: 489 DLIEDMGKEVVRQESPDEPGERSRLWFERDIVHVLKKNTGTRKIKMINMKFPSMESDIDW 548

Query: 477 NSYAFSKMPKLR-FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
           N  AF KM  L+ F+   G  +K                LE+    L+ +  C    +  
Sbjct: 549 NGNAFEKMTNLKTFITENGHHSKS---------------LEYLPSSLRVMKGC----IPK 589

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
               +   + ++D++ L              + +C+ L  +PD              +  
Sbjct: 590 SPSSSSSNKKFEDMKVLI-------------LNNCEYLTHIPD--------------VSG 622

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-NLGLL 654
           LP +L + S+V+        NL  I  S+R+L++L  L    CE+L++ P L   +L  L
Sbjct: 623 LP-NLEKFSFVR------CHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPLQSPSLQNL 675

Query: 655 SARNCTSLEKLPAGLSSMSSV 675
              NC SL+  P  L  M+++
Sbjct: 676 ELSNCKSLKSFPELLCKMTNI 696


>gi|227438255|gb|ACP30617.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1297

 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 238/742 (32%), Positives = 366/742 (49%), Gaps = 86/742 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R  F SH    L   SI  F D+++ R  +I+  L+  I  S IA+++
Sbjct: 99  YDVFPSFSGEDVRKTFLSHFLRELERNSIVAFKDNEMERSQSIAPELVQAIRDSRIAVVV 158

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
           FS+ YASS W                      FY +DPSH+RKQ+  FG  F +    + 
Sbjct: 159 FSKNYASSSWCLNELLEILQCNEEFGQLVIPIFYGLDPSHLRKQTGDFGEAFKKTCLNQT 218

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E   +WK ALT  A++ G+ S     E+ +IEEI+ND+L +LD T  S   +  VG++ 
Sbjct: 219 HEVEDQWKQALTNVANILGYHSKNCDSEAAMIEEISNDILGKLDVTPSSNEFEDFVGIKD 278

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF---ALNVREAE 215
            I E+  L+ + S+ V  + IWG  GI K TIA A+F  IS  F+ S F   A   +  E
Sbjct: 279 HIAEVILLMNLESKEVKMVGIWGTSGIGKTTIARALFCNISNQFQRSVFIDRAFISKSVE 338

Query: 216 ETGGIKD--------LQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVT------- 260
             G            L+   LSE+ +  NM+ I +   RL  +KV IV DD+        
Sbjct: 339 VYGRANPVDYNMKLRLRMNFLSEILERKNMK-IGAMEERLKHQKVLIVIDDLDDQYVLDA 397

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    SGSR+I+ T DKQ+LK    +  Y +       A ++FC+ AF  D     
Sbjct: 398 LAGQTKWFGSGSRIIVVTTDKQLLKAHGIDSIYEVGLPSDEQALEMFCRSAFRQDSPPDG 457

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +E   + ++ A  +PL L VLG  L G +KE   + + +L      +IEE L++ YD L
Sbjct: 458 LMEFASEVVECAGSLPLGLDVLGSSLRGLNKEDCLNMLPRLRRSLDGKIEETLRVGYDGL 517

Query: 372 DDSQKNVFLDIAC------------FLEGEHRDEVISIFD-ASKSLINLDLFYRIRMHDL 418
               K +F  IAC            FL     D  I + +  +KSLI +  + ++ MH L
Sbjct: 518 LGEDKAIFRHIACLFNHVDVKDIKLFLADSELDVDIGLNNLVNKSLIQVR-WGKVEMHHL 576

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++MGR +V  +SI  P KR  L   KDI  VL ++ GT  + GISL++++++ E+ ++ 
Sbjct: 577 LQEMGRNVVWLQSIKKPQKREFLVDSKDICDVLSESIGTSKLLGISLNVDEID-ELQVHE 635

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA------EVRHLEWPQCPLKTL--NICAE 530
            AF  M  L FL  Y +K + +      +P +      +++ L W   P++ +   +C +
Sbjct: 636 TAFKGMRNLHFLEIYSNKVRVVNGDKLKLPKSFDWLPPKLKLLCWSGYPMRCMPSTLCTD 695

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
           +LV LKM  +K+E+LW  V  L    C     I  ++     L+ +PD     NLE L +
Sbjct: 696 RLVKLKMRNSKLERLWKGVMSLT---CL----IEMDLCGSHDLKEIPDLTTATNLETLNL 748

Query: 589 KGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           +   ++ ELP S+  L+ + +L +     L+ +P  I +L  L  + +S C +L+T P++
Sbjct: 749 QSCRSLVELPSSIRNLNKLIKLDMQFCKKLKTLPTGI-NLKSLDHINLSFCSQLRTFPKI 807

Query: 648 PCNLGLLSARNCTSLEKLPAGL 669
             N+  L     TS+ + P  L
Sbjct: 808 STNISYLFLEE-TSVVEFPTNL 828



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 32/226 (14%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            +++ LP+ +   K+  + +   C  L   P+   N+  L +  T I E+P  +   S +K
Sbjct: 898  NLETLPTGI-NLKSLESLDFTKCSRLMTFPNISTNISVLNLSYTAIEEVPWWVEIFSKLK 956

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
             L +   S LE +  +I  L +L   F SHCE L        N+  LS+R  +S     A
Sbjct: 957  NLNMECCSKLEYVHPNISKLPRLAVDF-SHCEAL--------NIADLSSRTSSSELITDA 1007

Query: 668  GLSSMSS--------VLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
              S   S        +  V   N+ K + + L + +  G+            KSM F G 
Sbjct: 1008 SNSDTVSEESSSDKFIPKVGFINYFKFNQDVLLQQLSVGF------------KSMTFLGE 1055

Query: 720  EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLK 765
             +P +F H +  SS T+       +       F  CAVVVF    K
Sbjct: 1056 AVPSYFTHHTTESSLTIPLL--DTSLTQTFFRFKVCAVVVFDTMSK 1099


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  298 bits (763), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 258/903 (28%), Positives = 422/903 (46%), Gaps = 179/903 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRG DTRD FT  L+H L  + ++ F DD  L RGD I + LL  IE S  A++
Sbjct: 15  WDVFLSFRGTDTRDTFTMSLYHALHRRGLRVFRDDDGLERGDEIQKKLLEAIEDSAAAVV 74

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK- 102
           + S  YASS W                  FY VDPSHVRKQ   F   F     +FPE+ 
Sbjct: 75  VLSPDYASSHWCLDELAKICKCGRLILPVFYWVDPSHVRKQKGPFEDSFGSHANKFPEES 134

Query: 103 MKRWKNALTEAADLSGF--DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +++W++A+ +   ++G+  D    + + KLI+ +   +LK++  T  +     VG++  +
Sbjct: 135 VQQWRDAMKKVGGIAGYVLDEKCEKSD-KLIQHLVQILLKQMRNTPLNVAPYTVGLDDRV 193

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRH-FEGSYFALNVR-EAEETG 218
           EE++ LL + S  V  L ++G+GG+ K T+A ++FN +  H FE   F  N+R +  +  
Sbjct: 194 EELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFITNIRSQVSKHD 253

Query: 219 GIKDLQKKLLSELS--KDGNMRNIESQLNRLAR----KKVRIVFDDVTS----------- 261
           G+  LQ  +  +LS  K   + ++   ++ + R     +V ++ DDV             
Sbjct: 254 GLVSLQNTIHGDLSGGKKDPINDVNDGISAIKRIVQENRVLLILDDVDEVEQLKFLMGER 313

Query: 262 -----GSRVIITTRDKQVLKNC--WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                GSRV+ITTRD++VL     + +K Y +KEL ++ + +LFC  A          ++
Sbjct: 314 EWFYKGSRVVITTRDREVLTKAKSYVDKHYEVKELEFSPSMELFCYHAMRRKEPAEGFLD 373

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L  + ++   G+PLAL+V G +L   R+   W+ A+ K++ I    I +VLKIS+D+LD+
Sbjct: 374 LAKQIVEKTGGLPLALEVFGSFLFDKRTMREWKDAVEKMKQISPSGIHDVLKISFDALDE 433

Query: 374 SQKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
            +K +FLDIAC F++ E  R++V+ I +              ++ LI +    ++ MHD 
Sbjct: 434 QEKCIFLDIACLFVQMEMKREDVVDILNGCNFRGDIALTVLTARCLIKITGDGKLWMHDQ 493

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN------- 471
           +RDMGR+IV  E++  PG R+RLW   +I  VLK   GT  ++GI +D  K         
Sbjct: 494 VRDMGRQIVHSENLADPGLRSRLWDRDEILIVLKSMKGTRNVQGIVVDCVKRRMSTPRDR 553

Query: 472 --------------------------------------REIHMNSYAFSKMPKLRFLRFY 493
                                                 +E+ + +  F  M  LR L+  
Sbjct: 554 SADEITWENFRRKPSCKLALEYIKEKYKKYVRDREEKAKEVVLQAKNFESMVSLRLLQIN 613

Query: 494 GDKNKCMVSHLEG----VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW- 546
                   S LEG    +P   ++ L+W QCPL+ +  +    +L  + +  + +E LW 
Sbjct: 614 -------YSRLEGQFRCLP-PGLKWLQWKQCPLRYMPSSYSPLELAVMDLSESNIETLWS 665

Query: 547 ---------------DDVQRLPSS--LCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
                           +  RL ++  L  + +     + +C  L R+ + L NL  L   
Sbjct: 666 RSNNKVAEHLMVLNLSNCHRLTATPDLTGYLSLKKIVLEECSHLIRIHESLGNLSSLVHL 725

Query: 590 GT----TIRELPESLGRLSWVKRLILS-----------------------NNSNLERIPE 622
                  + ELP  +  +  ++ LILS                       +N+ +  +PE
Sbjct: 726 NLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPE 785

Query: 623 SIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
           SI HL+KL  L  + C  L+ LP      C+L  LS  N T+LE+LP  + S+  +  ++
Sbjct: 786 SIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSL-NHTALEELPYSVGSLEKLEKLS 844

Query: 680 L--CNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
           L  C  L + PN +  ++    +     +  GIK+     G+    + R  S+G   +L 
Sbjct: 845 LVGCKSLSVIPNSIGNLIS---LAQLFLDISGIKELPASIGS--LSYLRKLSVGGCTSLD 899

Query: 738 TRP 740
             P
Sbjct: 900 KLP 902



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 13/141 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
           V  LP S+             C  L+RLP    +L +L+ L++  T + ELP S+G L  
Sbjct: 780 VTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEK 839

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL------LSARNC 659
           +++L L    +L  IP SI +L  L  LF+     +  + ELP ++G       LS   C
Sbjct: 840 LEKLSLVGCKSLSVIPNSIGNLISLAQLFLD----ISGIKELPASIGSLSYLRKLSVGGC 895

Query: 660 TSLEKLPAGLSSMSSVLYVNL 680
           TSL+KLP  + ++ S++ + L
Sbjct: 896 TSLDKLPVSIEALVSIVELQL 916



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 15/167 (8%)

Query: 522 LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE 581
           LK L  C  KL SL+    ++      ++ LP S+ + +      ++ CK L  +P+ + 
Sbjct: 804 LKRLPTCIGKLCSLQ----ELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIG 859

Query: 582 NL-----EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
           NL      +L + G  I+ELP S+G LS++++L +   ++L+++P SI  L  +  L + 
Sbjct: 860 NLISLAQLFLDISG--IKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQLD 917

Query: 637 HCERLQTLPELPCNLGLLS---ARNCTSLEKLPAGLSSMSSVLYVNL 680
              ++ TLP+    + +L     +NC +L  LP     +S++  ++L
Sbjct: 918 GT-KITTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDL 963



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 27/164 (16%)

Query: 522  LKTLNICAEKLVS---LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
            L  L +  E LVS   L++  TK+  L       P  +   +     E+ +C+ L  LP 
Sbjct: 898  LDKLPVSIEALVSIVELQLDGTKITTL-------PDQIDAMQMLEKLEMKNCENLRFLPV 950

Query: 579  E---LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
                L  L  L +  T I ELPES+G L  + RL L     L+R+P+S  +L  L +L +
Sbjct: 951  SFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQM 1010

Query: 636  SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
                   TL  LP + G+L     TSL KL      M   LY+N
Sbjct: 1011 KE----TTLTHLPDSFGML-----TSLVKL-----DMERRLYLN 1040


>gi|359493390|ref|XP_003634584.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1067

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 298/1024 (29%), Positives = 460/1024 (44%), Gaps = 200/1024 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
            YDVFLSFRGEDTR+NFTSHL+  L   +IKTF DD+ +R G  I+  LL  IE S IAII
Sbjct: 23   YDVFLSFRGEDTRNNFTSHLYKDLDKANIKTFKDDEELRKGGEIAPELLKAIEESRIAII 82

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS+ YA S+W                      FY V P  VR Q  ++G  F +     
Sbjct: 83   VFSKTYAHSKWCLDELVKIMECQKEKGQIVYPVFYHVRPCEVRNQYGTYGEEFKKHESNA 142

Query: 100  PEKMKR----WKNALTEAADLSGFDSNVIRPESKLIEEIANDVL-KRLDATFQSKNKGLV 154
             E+ K+    W+ AL +A DLSGF    +R  S+           +RL   +    + +V
Sbjct: 143  DEEKKKKIGEWRTALRKAGDLSGFS---LRDRSEAEFIEEIIGEIRRLIPKWVHVGENIV 199

Query: 155  GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            G++ ++++++ L+   S  V  + I+G GGI K TIA  V+N +   F+   F  NVRE 
Sbjct: 200  GMDENLKKVKLLIDAQSNKVSMVGIYGTGGIGKTTIAKVVYNDMLDQFKCHSFLENVREK 259

Query: 215  -EETGGIKDLQKKLLSELSKDGNM--RNIESQLNRLARK----KVRIVFDDVT------- 260
             E+ G +  LQK+LL ++  + N+  RNI+    ++  K    KV IV DDV        
Sbjct: 260  YEDKGDLLQLQKELLCDILMEKNLVLRNIDEGFKKIKSKRHSEKVLIVLDDVGCEEQLKF 319

Query: 261  ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      GS +I+TTR+K+ L    +   Y  K +    A +LFC  AF  DH   +
Sbjct: 320  LAPNSECFHPGSIIIVTTRNKRCLDVYDSYSSYEAKRMADKQAEELFCWNAFKQDHPIEN 379

Query: 312  HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             + L+++ + YA G+PLAL VLG +L  R  + WES + +L+ IP   I++VL+ISYD L
Sbjct: 380  FVGLSNRILDYADGLPLALVVLGSFLFQRPMDEWESTLDELKTIPPENIQKVLQISYDGL 439

Query: 372  DDSQKNVFLDIACFLEGEHRDEVISIFDASK--SLINLDLFYR----------IRMHDLL 419
             D +K +FL IACF + E       I ++ K    I L + +           IRMHDLL
Sbjct: 440  SDERKKLFLYIACFFKDEDEKMATRILESCKLHPAIGLRVLHERCLISIEDNTIRMHDLL 499

Query: 420  RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            ++MG  IV  +    PGK +RL   +DI  VL +N   + ++ I L  +       M+  
Sbjct: 500  QEMGWAIVCNDP-ERPGKWSRLCELQDIESVLSQNEPAKKLKVIDLSYS-------MHLV 551

Query: 480  AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE------WPQCPLKTLNICA---- 529
              S + +   L+ + D N   +  LE + F+  R+LE      +    LKTL I      
Sbjct: 552  DISSISRCSKLKGFPDINFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLGITNCPKL 611

Query: 530  EKLVSLKM---PC-----------TKVEQLWDD--------VQRLPSSLCTFKTPITFEI 567
            E+++ +K+   PC           +    +WDD        ++ L S  C   + +   +
Sbjct: 612  EEMLEMKLGVDPCPWPFSPLTCHISNSAIIWDDHWHDCFSSLEALDSQ-CPLSSLVELSV 670

Query: 568  -------------------IDCKMLERLPDELENLEY------------LTVKGTTIREL 596
                               ++   L  +P  +E + Y            LT    T   +
Sbjct: 671  RKFYDMEEDIPIGSSHLTSLEILSLGNVPTVVEGILYDIFHLSSLVKLSLTKCKPTEEGI 730

Query: 597  PESLGRLSWVKRLILSNNSNLER--IPESIRHLSKLTFLF-------------------- 634
            P  +  LS +++L L ++ NL +  I + I HL+ L  L+                    
Sbjct: 731  PRDIQNLSPLQQLSL-HDCNLMKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLK 789

Query: 635  ---ISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV-NLCNFLKLDPNE 690
               +SHC++LQ +PELP +L  L A         P  +SS   +L + ++ N  K    E
Sbjct: 790  ALDLSHCKKLQQIPELPSSLRFLDAH-------CPDRISSSPLLLPIHSMVNCFK-SKIE 841

Query: 691  LSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLI 750
              +++     ++S +   GI   +  P + I +W  +++MG   T++  PP     + L 
Sbjct: 842  GRKVIN----RYSSFYGNGI--GIVIPSSGILEWITYRNMGRQVTIEL-PPNWYKNDDLW 894

Query: 751  SFAFCAVVVFPAFLK--YFRHKSG---EDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISY 805
             FA C V V PA       +++SG   EDD D          +   EG+  S  +G    
Sbjct: 895  GFALCCVYVAPACKSEDESQYESGLISEDDSDLKDEEASFYCELTIEGNNQSEDVG---- 950

Query: 806  VESDHVFLGCNSFGGEYFGPNYD--------EFSFRIHCSFHFPPYLERGEVKKCGIHFV 857
                H FL       +     +         E S+  +   HF       +V++CGI  V
Sbjct: 951  ----HFFLHSRCIKDDVSDMQWVICYPKLAIEKSYHTNQWTHFKASFGGAQVEECGIRLV 1006

Query: 858  YAQD 861
            Y +D
Sbjct: 1007 YRKD 1010


>gi|297815270|ref|XP_002875518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321356|gb|EFH51777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1080

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 246/794 (30%), Positives = 400/794 (50%), Gaps = 104/794 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R NF SH+      K I TF+D+++ RG++I   L+  I  S IA+++
Sbjct: 53  HQVFPSFRGEDVRRNFLSHIQKEFQRKGITTFVDNEIKRGESIGPKLIHAIRGSKIALVL 112

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY++DPS V+K +  FG  F  +   + 
Sbjct: 113 LSKNYASSSWCLDELVEIMKCKEELGQTVLPIFYKIDPSDVKKLTGKFGSAFKNICACKT 172

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E +++W+ AL + A  +G+ S     E+ +IE+I++D+LK L+ T  S +  GL+G+E 
Sbjct: 173 NEIIRKWRQALAKVATTTGYSSRNWDNEADMIEKISSDILKMLNYTTPSSDFGGLIGMEA 232

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE----- 213
            ++++E LLC+ S+ V  + IWG  GI K  IA  +FN+ +  FE S F  N++E     
Sbjct: 233 HMKKMEQLLCLDSDEVRMIGIWGPSGIGKTIIARVLFNQFNGSFELSVFVENIKELMCRP 292

Query: 214 --AEETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS-------- 261
             +++      +Q++ +S+++    M   ++    + L  KKV +V D++          
Sbjct: 293 LCSDDYSTKLHIQRQFMSQITNHKEMEICHLGVVQDMLHDKKVLVVLDNIDQSIQLDAIA 352

Query: 262 --------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   GSR+IITT D+++LK +   N  Y++     ++A ++FC +AFG        
Sbjct: 353 KETCWFGQGSRIIITTHDQKLLKAHDDINHIYKVGFPSASEACQIFCMYAFGQKFPKDGF 412

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            +L  +  K   G+PL L+V+G +  G SKE W +A+ +L+      I+ +LK SYD+L 
Sbjct: 413 EDLAWQVTKLLGGLPLGLRVMGSHFRGMSKEEWINALPRLKTRLDSSIQSILKFSYDALW 472

Query: 373 DSQKNVFLDIACFLEGEHRDEVIS-----IFD--------ASKSLINLDLFYRIRMHDLL 419
           D  K++FL IAC    +   +V         D        A K LI++D  + I+MH+LL
Sbjct: 473 DEDKDLFLHIACLFNNKRTSKVEEHLAHKFLDVRQGLYVLAEKCLISIDTEW-IKMHNLL 531

Query: 420 RDMGREIVRKE----SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
             +G+EIVR E    SI  PGKR  L   +DI +VL  +TG+ ++ GI  D +++  E++
Sbjct: 532 EQLGKEIVRHEPGHQSICDPGKRQLLVDARDICEVLTDDTGSSSVIGIHFDPSELLGELN 591

Query: 476 MNSYAFSKMPKLRFLRF---YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
           ++  AF  M  L+FLRF   YGD++  +      +P    + L      L T+ + ++ +
Sbjct: 592 ISEGAFEGMSNLKFLRFKCTYGDQSDKLY-----LP----KGLSLLSPKLTTMGLFSDVM 642

Query: 533 VSLKMPCTKVEQL-W------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEY 585
            + +     +E L W       +++ LP+     K    F +IDC  L  LP  + N   
Sbjct: 643 FAFQFLYEPLENLKWMVLSYSKNLKELPNLSTATKLQELF-LIDCTSLVELPSSIGNAIS 701

Query: 586 LTV----KGTTIRELPESLG---RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           L      +  +I ELP   G    LSW+    LS  S+L  +P SI + + L  L +  C
Sbjct: 702 LQTLHLGECKSIVELPSCFGNAINLSWLN---LSGCSSLVELPSSIGNATNLEILHMDMC 758

Query: 639 ERLQTLPELPCNLGLL---SARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSE 693
             +  LP    NL  L   + + C  LE LP  + ++ S+  +NL  C  LK  P E+S 
Sbjct: 759 TDVVKLPSSIGNLYKLREFTLKGCLKLEILPTNI-NLESLDELNLTDCLLLKRFP-EIST 816

Query: 694 IVKDGWMKHSLYEE 707
            +K  ++  +  EE
Sbjct: 817 NIKHLYLNGTAVEE 830



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 59/255 (23%)

Query: 548 DVQRLPSSLC--------TFKTPITFEII---------------DCKMLERLPDELENLE 584
           DV +LPSS+         T K  +  EI+               DC +L+R P+   N++
Sbjct: 760 DVVKLPSSIGNLYKLREFTLKGCLKLEILPTNINLESLDELNLTDCLLLKRFPEISTNIK 819

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES--------------------I 624
           +L + GT + E+P S+   S +  L +S + +L++ P +                    +
Sbjct: 820 HLYLNGTAVEEVPSSIKSWSRLDDLHMSYSESLKKFPHALDIITTLYVNDLEMHEIPLWV 879

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
             +S L  L ++ C++L +LP+LP +L  L A NC SLE+L    S  +  +Y+N  N  
Sbjct: 880 TKISCLRGLKLNGCKKLVSLPQLPDSLSYLEAVNCESLERL--DFSFYNPKIYLNFVNCF 937

Query: 685 KLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
           KL+  E  E++      +++            PG E+P  F +++   ++ +     RP 
Sbjct: 938 KLN-KEARELIIQTSTDYAV-----------LPGGEVPAKFTYRANRGNSMIVNLNHRPL 985

Query: 745 GYNKLISFAFCAVVV 759
                  F  C ++V
Sbjct: 986 STTS--RFKACILLV 998


>gi|357437847|ref|XP_003589199.1| Disease resistance protein [Medicago truncatula]
 gi|355478247|gb|AES59450.1| Disease resistance protein [Medicago truncatula]
          Length = 1613

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 248/771 (32%), Positives = 390/771 (50%), Gaps = 96/771 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT HL+  L  K I TFIDD  L +GD I+ SLL  IE S IAI+
Sbjct: 10  YDVFLSFRGTDTRYTFTGHLYKALHNKGIMTFIDDDHLQKGDQITPSLLKAIENSRIAIV 69

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE-- 101
           + S+ YASS +                  FY V+PS+VRK S SFG   +    R+ +  
Sbjct: 70  VLSKNYASSSFCLQELCKILENGGLVWPVFYEVEPSNVRKLSGSFGEAMAVHEVRYSDDV 129

Query: 102 -KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            ++++WK  L + A+L+GF   N    E + I +I   V + +        +  VG+E  
Sbjct: 130 DRLEKWKKGLYQVANLAGFHYKNGDGYEHEFIGKIVEQVSREIKPLTIPVVEYRVGLEPQ 189

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
            + + SLL +G +   ++   GI GI K T+A  V+N I   FE S F  N++E  E  G
Sbjct: 190 RKNVLSLLNVGCDD--RVAKVGIHGIGKTTLALEVYNLIVHQFESSCFLENIQENSEKHG 247

Query: 220 IKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIV-------------FDDVTSG-- 262
           +  LQK +L E+   K+  + +++  ++ + ++  +                D +  G  
Sbjct: 248 LIYLQKIILLEIIGEKEIELTSVKQGISVIQQRLRKKKVLLLLDDVDEQKQLDAIAGGND 307

Query: 263 -----SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
                SRVIITTRDK +L +      Y + EL   DA +L  Q AF  + +  ++ ++ +
Sbjct: 308 WYGLGSRVIITTRDKGLLLSHGVESTYEVHELNKKDAFELLRQKAFKTNKVCPNYADVLN 367

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           +A+ +A G+PLAL+V+G +L  ++ E  +S + + E IP  +++ +LK+S+D+L++ +K+
Sbjct: 368 RALTHASGLPLALEVIGSHLFHKTVEQCKSTLDRYERIPDKKMQTLLKVSFDALEEEEKS 427

Query: 378 VFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLLRDMG 423
           VFLDIAC  +G     V  +  A               KSLI +     + +HD++ DMG
Sbjct: 428 VFLDIACCFKGYDLTIVNKMLHAHHGDNMEDHMQVLVEKSLIKITESRSVTLHDVIEDMG 487

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EIVR+ES   PGKR+RLW  +DI QVL++NTGT  IE I LD    + E+  +  AF K
Sbjct: 488 KEIVRQESPKEPGKRSRLWCPEDIVQVLEENTGTSKIEIIYLDS---SIEVKWDEEAFKK 544

Query: 484 MPKLRFLRF----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           M  LR L      + +  K + + L        R LEW + P   +  +   +KL   K+
Sbjct: 545 MENLRTLIIRHGAFSESPKYLPNSL--------RILEWRKYPSGGVPSDFYPKKLAICKI 596

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GTTIR 594
                  +W D  +       F+      I +C  L R+PD   L NLE L+ +    + 
Sbjct: 597 AFDFTSFVWGDFLKK-----KFQNMKVLNIDNCGFLARMPDISGLLNLEELSFQYCENLI 651

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP----CN 650
            + +S+G L+ +K L + +   L+ +P     L  L  L +S+ + L++ P +       
Sbjct: 652 TMDDSVGLLAKLKILRVGSCKKLKSLPP--LKLVSLEELDLSYIDSLESFPHVVDGFLNK 709

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
           L  LS +NC ++  +P     M+S+  +NL   L  D  E   +V DG ++
Sbjct: 710 LQTLSVKNCNTIRSIPP--LKMASLEELNL---LYCDSLECFPLVVDGLLE 755



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 41/225 (18%)

Query: 564  TFEIID---CKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL 617
            + E++D   C  LE  P    E+EN+  + +  T I+ELP S   L+ ++ L L N   +
Sbjct: 1295 SLEVLDLSYCDNLESFPKILGEMENIRQVHLYTTPIKELPFSFQNLTRLRTLYLCN-CGI 1353

Query: 618  ERIPESIRHLSKLTFLFISHCERL---------QTLPELPCNLGLLSARNCT-SLEKLPA 667
             ++P SI  + +L  L I     L         + +      +  L   NC  S E L  
Sbjct: 1354 VQLPSSIVMMQELDELIIEDGGWLFQKEDQGDKEVISMQSSQVEFLRVWNCNLSDESLAI 1413

Query: 668  GLSSMSSVLYVNLCNFLK----LDPN----------ELSEIVKDGWMKHSLYEERGIKKS 713
            GL   ++ L+++ C  L+    + PN           L+      +M   L+E      S
Sbjct: 1414 GLMWFANKLFLDNCENLQEIKGIPPNLKTFSAINCISLTLSCTSKFMNQELHESGN--TS 1471

Query: 714  MYFPGNEIPKWFRHQSM-GSSATLKTRPPRPAGYNKLISFAFCAV 757
              FP  EIPKW  HQ M G S +   R       NK  +   C V
Sbjct: 1472 FVFPQAEIPKWIDHQCMQGLSISFWFR-------NKFPAIVLCVV 1509


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 230/646 (35%), Positives = 341/646 (52%), Gaps = 87/646 (13%)

Query: 118 GFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKL 177
           GF+ +  R E++LIEEI  DV K+L   F   +  LVG++  I  + SLL   SE +   
Sbjct: 22  GFEQSYKR-ETELIEEIVADVWKKLQPKFSHYDDELVGIDSRINNMCSLLRTDSEEIRFE 80

Query: 178 RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQKKLLSELSKDGN 236
            IWG+GGI K T+A  ++ KI   F+ S F  NVRE + E  G+  LQ+KLLS L K  +
Sbjct: 81  GIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELSSERDGLLCLQRKLLSHL-KISS 139

Query: 237 MRNIESQ-------LNRLARKKVRIVFDDVTS---------------GSRVIITTRDKQV 274
           MR IES         N L  KKV +V DD++S               GSRVIITTRDK +
Sbjct: 140 MR-IESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENLAGKQWFGPGSRVIITTRDKHL 198

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
           L +    + Y  + L   ++ +LF Q AF     +   +EL+ +A++ A G+PLALKVLG
Sbjct: 199 LVSLSVCEIYDAQILNSHESLQLFSQKAFRSGKPEEGFVELSKQAVQCAGGIPLALKVLG 258

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV 394
            +LCGR   VWE A++ L+     +I + L+ISYD L D +K +FLDIACF +G  +D V
Sbjct: 259 SFLCGRKASVWEDALKMLQQDLQNDIYKTLRISYDGLRDMEKAIFLDIACFFKGSRKDHV 318

Query: 395 ISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRL 441
             I +               KSLI  D  + + MHDLL++MGR IV  ES+N  GK++RL
Sbjct: 319 TQILENCGLNPLIGIDVLIEKSLITYD-GWHLGMHDLLQEMGRNIVLHESLNDAGKQSRL 377

Query: 442 WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV 501
           W  KDI QVL+ N GTE+ + + L++++   E   N  AF+KM  LR L      NK  +
Sbjct: 378 WSLKDIDQVLRNNKGTESTQAVVLNLSEA-FEASWNPEAFAKMGNLRLLMIL---NKLQL 433

Query: 502 SH-LEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
            H L+ +P + ++ L W +CPL++L I   +++LV L M  +K++ LW   + L +    
Sbjct: 434 QHGLKCLP-SGLKVLVWKECPLESLPIGDQSDELVDLDMCHSKIKHLWKGTKLLGNL--- 489

Query: 559 FKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNS 615
                T  + + K L + PD   + NLE L ++G   + E+  SLG L  +  + L +  
Sbjct: 490 ----KTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCK 545

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLP--------------------ELPCNLGLLS 655
           NL+ +P  +  ++ L  L ++ C  ++ LP                    ELP  +G L+
Sbjct: 546 NLKSLPGKL-EMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLT 604

Query: 656 A------RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSE 693
                  R+C ++  LP   S + S+  +NL  C+     P+ L E
Sbjct: 605 GLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHE 650



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +P+ LG LS +  L +S N+ +      I  L KL  L +S C+ LQ+LP LP N+  ++
Sbjct: 740 IPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVN 799

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY 715
             +C+SL+ L                     DP E+   +   +    L +   IK  + 
Sbjct: 800 TSDCSSLKPLS--------------------DPQEIWGHLA-SFAFDKLQDANQIKTLLV 838

Query: 716 FPGNEIPKWFRHQS 729
            PGNEIP  F +Q+
Sbjct: 839 GPGNEIPSTFFYQN 852


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 201/625 (32%), Positives = 325/625 (52%), Gaps = 74/625 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF---IDDQLIRGDNISQSLLGTIEASCIA 58
           YDVFLS R +DT  +F + LH  L+ + I  F   IDD+      + + +   +E S  +
Sbjct: 33  YDVFLSHRVKDTGSSFAADLHEALTNQGIVVFRDGIDDEDAEQPYVEEKM-KAVEESRSS 91

Query: 59  IIIFSERYAS--------------------SRWFFYRVDPSHVRKQSHSFGRHFSRLR-- 96
           I++FSE Y S                        FY++DP +VRKQ  +F ++F+     
Sbjct: 92  IVVFSENYGSFVCMKEVGKIVTCKELMDQLVLPIFYKIDPGNVRKQEGNFKKYFNDHEAN 151

Query: 97  -KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            K   E+++ W+ ++ +   LSG+       E  +I E+   +  +L       +  LVG
Sbjct: 152 PKIDIEEVENWRYSMNQVGHLSGWSE-----EGSIINEVVKHIFNKLRPDLFRYDDKLVG 206

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +   + +I  LL IG + V  + IWG+GGI K TIA  ++  +S  F+G YF  NV+EA 
Sbjct: 207 ISPRLHQINMLLGIGLDDVRFVGIWGMGGIGKTTIARIIYKSVSHLFDGCYFLDNVKEAL 266

Query: 216 ETGGIKDLQKKLLSE--LSKDGNMRNIESQL---NRLARKKVRIVFDDVT---------- 260
           +   I  LQ+KLL+   + ++ ++ N +       R++  K  I+ DDV           
Sbjct: 267 KKEDIASLQQKLLTGTLMKRNIDIPNADGATLIKRRISNIKALIILDDVNHLSQLQKLAG 326

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 SGSRVI+TTRD+ +L +    ++Y ++ L   +  +LF Q AFG +H    + +
Sbjct: 327 GLDWFGSGSRVIVTTRDEHLLISHGIERRYNVEVLKIEEGLQLFSQKAFGEEHTKEEYFD 386

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + + YA G+PLA++VLG  L  +  E W +A+ KL  +   EI E LKISY  L+ S
Sbjct: 387 VCSQVVDYAGGLPLAIEVLGSSLRNKPMEDWINAVEKLWEVRDKEIIEKLKISYYMLEKS 446

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA--SKSLINLDLFY----------RIRMHDLLRDM 422
           ++ +FLDIACF + + + + I I ++    +++ L++            ++ MHDL+++M
Sbjct: 447 EQKIFLDIACFFKRKSKKQAIEILESFGFPAVLGLEILEEKCLITTPHDKLHMHDLIQEM 506

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G+EIVR+  +N P KR RLW  +D+   L ++ GTEAIEGI +D+++   E H+N+ AFS
Sbjct: 507 GQEIVRQNFLNEPEKRTRLWLREDVNLALSRDQGTEAIEGIMMDLDE-EGESHLNAKAFS 565

Query: 483 KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           +M  LR L+     N   +S        ++R L W   PLKTL  N     L+ L++P +
Sbjct: 566 EMTNLRVLKL----NNVHLSEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPNS 621

Query: 541 KVEQLWDDVQRL--PSSLCTFKTPI 563
            +  LW   + L  P  L  F  P+
Sbjct: 622 SIHHLWTASKELDSPMGLSVFYIPM 646



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 172/616 (27%), Positives = 274/616 (44%), Gaps = 119/616 (19%)

Query: 131  IEEIAN---DVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISK 187
            I+ IAN   D L RL    Q+K + L  +   +  ++ LL +GS  V  + I G+ GI K
Sbjct: 747  IQSIANSIGDHLLRL--KLQAKEENLFEMPLRLRTMKMLLGLGSNDVRFIGIVGMSGIGK 804

Query: 188  ITIAGAVFNKISR------------HFEG-SYFALNVREAEETGGIKDLQKKLLSELSKD 234
             T+A   + +I +            HF G S  +L  +  ++   +K +  ++L E   +
Sbjct: 805  TTLAEMTYLRIFKPFVSALRKPYFLHFVGRSIVSLQQQLLDQLAFLKPIDIQVLDE---N 861

Query: 235  GNMRNIESQLNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNC 278
              +  I   L+ L  K V IVFD +T                +GSR+IITT +K +  + 
Sbjct: 862  HGVELIMQHLSSL--KNVLIVFDGITERSQLEMLAGSPDWFGAGSRIIITTTNKNIFHHP 919

Query: 279  WANKK---YRMKELVYADAHKLFCQWAFGGDHLDASHIE-LTDKAIKYAQGVPLALKVLG 334
                K   Y ++ L +  A  LFC+ AFG DH    +++ L ++ I+    +PLAL+ + 
Sbjct: 920  NFKDKVQEYNVELLSHEAAFSLFCKLAFG-DHPHTQNMDDLCNEMIEKVGRLPLALEKIA 978

Query: 335  CYLCGRSKEVWESAMRKLEIIPHVEI-EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDE 393
              L G++ +VWE  ++    + +  I  +VLK SY+ L+   + +FLD+ACFL GE  D 
Sbjct: 979  FSLYGQNIDVWEHTLKNFHQVVYDNIFSDVLKSSYEGLEAESQQIFLDLACFLNGEKVDR 1038

Query: 394  VISI---FDASKSLINLDLFY----------RIRMHDLLRDMGREIVRKESINHPGKRNR 440
            VI I   F  +    NL L             I+MH L+  MG+EIV +E  N   ++ R
Sbjct: 1039 VIQILQGFGYTSPQTNLQLLVDRCLIDILDGHIQMHILILCMGQEIVHRELGN--CQQTR 1096

Query: 441  LWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCM 500
            +W   D  ++  +N   + I GI +D+ +    + + + AF+ M +LR LR     N   
Sbjct: 1097 IWLRDDARRLFHENNELKYIRGIVMDLEEEEELV-LKAKAFADMSELRILRI----NNVQ 1151

Query: 501  VSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
            +S        ++  L WP  P K L        L+ L +P + VE+LW+  Q        
Sbjct: 1152 LSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGSNVERLWNGTQ-------N 1204

Query: 559  FKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLE 618
            FK     +  D K L   P+                E P+       ++RLIL N   L 
Sbjct: 1205 FKNLKEIDASDSKFLVETPN--------------FSEAPK-------LRRLILRNCGRLN 1243

Query: 619  RIPESIRHLSKL------------TFLFISHCERLQTL----------PELPCNLGLLSA 656
            ++  SI  L +L            +F F   C+ L+TL          PE  C +G L+ 
Sbjct: 1244 KVHSSINSLHRLILLDMEGCVSFRSFSFPVTCKSLKTLVLSNCGLEFFPEFGCVMGYLTE 1303

Query: 657  RNC--TSLEKLPAGLS 670
             +   TS+ KL   ++
Sbjct: 1304 LHIDGTSINKLSPSIT 1319



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 32/232 (13%)

Query: 148  SKNKGLVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-GS 205
            S    LVG+E  ++++ +LL +  S+ +  + I+G  GI K TIA  V+N I   F+ G 
Sbjct: 1614 SHKTSLVGMENQVKKVCNLLDLERSKDILFVGIFGSSGIGKTTIAEVVYNTIIDEFQSGC 1673

Query: 206  YFALNVREAEETGGIKDLQKKLLSEL-SKDGNMRNIE--SQL--NRLARKKVRIVFDDV- 259
            +  L+ ++      +  LQ ++LS L SK+  + + +  +QL  + ++ +KV IV D V 
Sbjct: 1674 FLYLSSKQ----NSLVPLQHQILSHLLSKETKIWDEDHGAQLIKHHMSNRKVVIVLDGVD 1729

Query: 260  ---------------TSGSRVIITTRDKQVLKNCWAN---KKYRMKELVYADAHKLFCQW 301
                             GSRVIIT  ++ VL         ++Y+++ L    A+ LFC+ 
Sbjct: 1730 ERNQIEKLVGSPNWFAPGSRVIITATNRDVLHQLNYRDQVQEYKVELLSRESAYSLFCKN 1789

Query: 302  AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE 353
            AFG    D +  +L  + ++    +PLAL+ +G YL  +  +VW   +++L+
Sbjct: 1790 AFGDGPSDKN--DLCSEIVEKVGRLPLALRTIGSYLHNKDLDVWNETLKRLD 1839


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
          Length = 1384

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 242/795 (30%), Positives = 387/795 (48%), Gaps = 129/795 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTRDNF  HL+  L  K ++ F D++ + RGD IS SL   +E S  ++I
Sbjct: 14  YDVFLSFRGADTRDNFGDHLYKALKDK-VRVFRDNEGMERGDEISSSLKAGMEDSAASVI 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y+ SRW                      FY VDPSHVRKQS    + F   + RF
Sbjct: 73  VISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPSHVRKQSDHIKKDFEEHQVRF 132

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               EK++ W+ ALT   +L+G+  +    +  +IE +   VL  L  T +   + +VG+
Sbjct: 133 SEEKEKVQEWREALTLVGNLAGYVCDKDSKDDDMIELVVKRVLAELSNTPEKVGEFIVGL 192

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           E  ++++  L+    S GV  L ++G+GGI K T+A A +NKI  +FE   F  ++RE +
Sbjct: 193 ESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERS 252

Query: 215 EETGGIKDLQKKLLSELSK-DGNMRNIESQLNRLA----RKKVRIVFDDVT--------- 260
               G+  LQK L+ EL +    + ++   L ++      KK+ +V DDV          
Sbjct: 253 SAENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALV 312

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   G+ ++ITTRD ++L     N++Y +K L    A KLF   +   +    + +
Sbjct: 313 GETRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEEPTKNLL 372

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLEIIPHVEIEEVLKISYDSLD 372
            L+ K ++ +  +PLA++V G  L  + +E  W++ + KL+      +++VL++S+ SLD
Sbjct: 373 ALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKSLD 432

Query: 373 DSQKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           D +K VFLDIAC FL+ E  +DEV+ +                 KSL+ +     + MHD
Sbjct: 433 DEEKKVFLDIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWMHD 492

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK-------- 469
            +RDMGR++V KES   PG R+RLW   +I  VL    GT +I GI LD  K        
Sbjct: 493 QIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARDPTA 552

Query: 470 ---VNR-------------------------------EIHMNSYAFSKMPKLRFLRFYGD 495
              V+R                               EI +   +F+ M KLR L+    
Sbjct: 553 DEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQI--- 609

Query: 496 KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP 553
            N  +  +L+ +P +E++ ++W  CPL+ L  +  A +L  L +  + + Q    VQ L 
Sbjct: 610 NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQ----VQTLR 664

Query: 554 SSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIR-ELPESLGRLSWVKRLI 610
           + +      +   +  C  LE +PD    E LE L  +  T+  ++P+S+G L  +  L 
Sbjct: 665 NKMVDENLKVVI-LRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLD 723

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA-----RNCTSLEKL 665
               S L      +  L  L  LF+S C  L  LPE   N+G +++      + T+++ L
Sbjct: 724 FRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPE---NIGAMTSLKELLLDGTAIKNL 780

Query: 666 PAGLSSMSSVLYVNL 680
           P  ++ + ++  ++L
Sbjct: 781 PESINRLQNLEILSL 795



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 41/286 (14%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+ L +LS + +L L NN     +P S+  LS L  L +  C  L+ LP LPC L  L
Sbjct: 1077 KIPDDLEKLSCLMKLNLGNNY-FHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL 1135

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--VKDGWM-----KHSLYE 706
            +  NC SLE + + LS ++ +  +NL N  K +D   L  +  +K  +M      +SL  
Sbjct: 1136 NLANCFSLESV-SDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAV 1194

Query: 707  ERGIKKS-------MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            ++ + K+       +  PGN +P WF         T   +P      N+ +     AVVV
Sbjct: 1195 KKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQP------NRELRGVIIAVVV 1244

Query: 760  FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH--LYSWFLGKISYVESDHVFLGCNS 817
                      ++ +DD+             K + H    +  L  +    +D + +   S
Sbjct: 1245 ------ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQLHICRYS 1298

Query: 818  FGGEYFGPNYDEF--SFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                 F P        + I      PP  +  E+K  GIH VY  D
Sbjct: 1299 ----AFHPLVTMLKDGYTIQVIKRNPPIKQGVELKMHGIHLVYEGD 1340



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 9/128 (7%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         E+ +CK L+ LP    +++ L  L ++G+ I ELPE  G+L  
Sbjct: 917  IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 976

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L +SN   L+R+PES   L  L  L++        + ELP + G LS  N   LE L
Sbjct: 977  LVELRMSNCKMLKRLPESFGDLKSLHRLYMKET----LVSELPESFGNLS--NLMVLEML 1030

Query: 666  PAGLSSMS 673
               L  +S
Sbjct: 1031 KKPLFRIS 1038



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 8/127 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   +      +  CK+ E LP     L++LE L +  T ++ LP S+G L  
Sbjct: 777 IKNLPESINRLQNLEILSLRGCKIQE-LPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKN 835

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL---SARNCTSL 662
           ++ L L   ++L +IP+SI  L  L  LFI+    ++ LP  P +L  L   SA +C  L
Sbjct: 836 LQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA-VEELPLKPSSLPSLYDFSAGDCKFL 894

Query: 663 EKLPAGL 669
           +++P+ +
Sbjct: 895 KQVPSSI 901



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 26/124 (20%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKGTTIRELPESLGRLSW 605
           V+ LP    +  +   F   DCK L+++P  +    +L  L +  T I  LPE +G L +
Sbjct: 870 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 929

Query: 606 VKRLILSN-----------------------NSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L L N                        SN+E +PE    L KL  L +S+C+ L+
Sbjct: 930 IRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLK 989

Query: 643 TLPE 646
            LPE
Sbjct: 990 RLPE 993


>gi|357446429|ref|XP_003593492.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
 gi|355482540|gb|AES63743.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
          Length = 895

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 245/778 (31%), Positives = 387/778 (49%), Gaps = 110/778 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  LS     TFIDD +L  GD I+QSL+  IE S I I 
Sbjct: 17  YDVFLSFRGTDTRYGFTGNLYRALSDGGFCTFIDDRELHGGDEITQSLVKAIEESMIFIP 76

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS  YASS +                       FY V+PSHVR Q+ S+G+  +R  KR
Sbjct: 77  VFSINYASSIFCLDELVHIIHCFDQEKGRKILPIFYDVEPSHVRHQTGSYGKAIARHEKR 136

Query: 99  FP----------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQ 147
           F           +++ +WK AL +AA+LSG   N     + K I +I  +V  +++    
Sbjct: 137 FQNNKEKYNYNMKRLHKWKMALNQAANLSGHHFNPRNEYQYKFIGDIVKNVSNKINRAPL 196

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSY 206
                 VG++  + ++ SLL + S    K+  I+G+GG+ K T+A AV+N I+  FE   
Sbjct: 197 HVVDYPVGMQSRVLKVNSLLEVASNYEVKMIGIYGLGGMGKTTLARAVYNFIANQFECVC 256

Query: 207 FALNVREAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDV-- 259
           F  NVRE     G++ LQK  LS     ++    +   I     RL RKKV +V DDV  
Sbjct: 257 FLHNVRENSAKHGLEHLQKDFLSKTVGLDIKLGDSSEGIPIIKQRLHRKKVLLVLDDVNE 316

Query: 260 --------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                         + GSRVIITTRDK +L +      Y + EL   +A +L    AF  
Sbjct: 317 LKQVQVLAGGLDWFSVGSRVIITTRDKHLLSSHGIELTYEIDELNKEEALELLTWKAFKS 376

Query: 306 DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLK 365
             +++S+  + ++A+ YA G+PLAL+VLG  L G++ + W S + + E IP+ EI+++LK
Sbjct: 377 KQVNSSYEHVLNRAVNYASGLPLALEVLGSNLFGKNIKEWNSLLDRYERIPNKEIQKILK 436

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLF- 410
           +S+D+L++ +++VFLDIAC  +G +  ++  +                  K+L+ +  + 
Sbjct: 437 VSFDALEEDEQSVFLDIACCFKGYNLKQMEDMLSDHYGQCMKYHIGVLVKKTLLRICRWN 496

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA----IEGISLD 466
           Y + MHDL+ DMG+EIVR+ES+  PGKR+RLW H+DI+Q +++N+  +     +   +LD
Sbjct: 497 YSVTMHDLIEDMGKEIVRQESVREPGKRSRLWFHEDIFQAIEENSVRQYTYFFLFMFNLD 556

Query: 467 MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLE-GVPFAEVRHLEW--PQCPLK 523
           +  +N     +           FL FY  K    +S+++ G    E+ HL++  PQ  ++
Sbjct: 557 LALLNISATNDHVG-------DFLPFYDMK----ISYMKCGTSQIEIIHLDFPLPQAIVE 605

Query: 524 TLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK------TPITF---EIIDCKMLE 574
                 +K+ +LK    K       +  LP+SL   +       P  F    +  CK+  
Sbjct: 606 WKGDEFKKMKNLKTLIVKTSSFSKPLVHLPNSLKVLEWHGLKDIPSDFLPNNLSICKLPN 665

Query: 575 ------RLPDELENLEYLTVKGTTIRE---LPE--SLGRLSWVKRLILSNNSNLERIPES 623
                 +L + L+   +L +K   + +   L E   +  L  ++        NL  I +S
Sbjct: 666 SSLTSFKLANSLKERMFLGMKVLHLDKCYRLTEISDVSSLQNLEEFSFRWCRNLLTIHDS 725

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN-CTSLEKLPAGLSSMSSVLYVNL 680
           +  L KL  L    C  L++ P +      L   + C  L+K P  L  M +++ ++L
Sbjct: 726 VGCLKKLKILKAEGCSNLKSFPPIQLTSLELLELSYCYRLKKFPEILVKMENIVGIDL 783


>gi|224145716|ref|XP_002325741.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|224145719|ref|XP_002325742.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862616|gb|EEF00123.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862617|gb|EEF00124.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 532

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 195/518 (37%), Positives = 282/518 (54%), Gaps = 66/518 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR NFT HL+  L    I TF DD +L RG+ IS  L+  IE S I+I+
Sbjct: 10  YDVFLSFRGKDTRKNFTDHLYTALIQAGIHTFRDDNELPRGEEISPQLVKAIEGSRISIV 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS++YASSRW                      FY  +PS VRKQ+ S+ + F    + F
Sbjct: 70  VFSKQYASSRWCLDELVKIVECRQKIDQVVLPIFYDTEPSDVRKQTGSYAKAFDEHEEHF 129

Query: 100 PEKMKR---WKNALTEAADLSGFDSN--VIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E+M++   W+ AL EA +LSG+  N      E++ I+ I +DV  +L        K  V
Sbjct: 130 KEEMEKVNKWRGALAEAGNLSGWGLNNEANGYEAEFIKRIVSDVACKLGNKTLHVAKHPV 189

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G+   ++ I SLL      V  + I GI GI K TIA AVFNK+   FEGS F L+V+E 
Sbjct: 190 GIYSRVQGIISLLKGAKPDVGIVGIHGIAGIGKTTIAKAVFNKLYFGFEGSSFLLDVKEI 249

Query: 214 AEETGGIKDLQKKLLSELSKDG--NMRNIESQLN----RLARKKVRIVFDDVT------- 260
           +++  G+ +LQ++LL ++ K     + N+   +N    RL RKK+ +VFDDV        
Sbjct: 250 SDKPNGLVELQERLLHDILKPNVWKLSNVYEGMNLIKERLHRKKILVVFDDVDKREQLEA 309

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    +GS +I+ T++K +L     ++ Y  KEL    + +LF   AF   H   +
Sbjct: 310 LMGERCWFGAGSIIIVVTKNKHLLAEVGVDEMYHAKELDRDQSLQLFSLHAFRETHPAKN 369

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + EL+ K + Y +G+PLAL++LG +L  R K  WE  +   +  PH +I+  L++S+D+L
Sbjct: 370 YEELSGKVVDYCKGLPLALQILGSHLSIRDKAGWEIDIAHWKNTPHDDIQGKLRVSFDAL 429

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDL--FYRIRM 415
           +     +FLDIAC+  G  ++ V  I  A               +SLI +D     R+RM
Sbjct: 430 NVDTSEIFLDIACYFVGRDKEYVADIVGARYDCHPEVAFRTLIGRSLITIDTEKQNRLRM 489

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
           HD+LR MGREI+R+ S N PG  +R+W  KD Y VL K
Sbjct: 490 HDILRKMGREIIRQRSRNRPGNCSRIWLPKDAYNVLSK 527


>gi|356514963|ref|XP_003526171.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 236/721 (32%), Positives = 347/721 (48%), Gaps = 139/721 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+NFT+ L   LS   I  F DD  L +G++I+  LL  IE S + ++
Sbjct: 28  YDVFVSFRGEDTRNNFTAFLFDALSQNCINAFKDDADLKKGESIAPELLQAIEGSRLFVV 87

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASS W                       FY VDPS VRKQS  +G  F     R
Sbjct: 88  VFSKNYASSTWCLRELAHICNCTIEASPGRVLPIFYDVDPSEVRKQSAYYGIAFEEHEGR 147

Query: 99  F---PEKMK---RWKNALTEAADLSGFDSNVIRPESK--LIEEIANDVLKRLDATFQSKN 150
           F    EKM+   RW+ ALT+ A+LSG+D   IR +S+  +I+EI  ++   L   FQ+  
Sbjct: 148 FREDKEKMEEVLRWREALTQVANLSGWD---IRNKSQPAMIKEIVQNIKYILGPKFQNPP 204

Query: 151 KG-LVGVECSIEEIESLLCIGSEGVCKLRIWGI---GGISKITIAGAVFNKISRHFEGSY 206
            G LVG+E S+EE+E   C+  E V  +R+ GI   GGI K T+A A++ KI+  ++   
Sbjct: 205 NGNLVGMESSVEELEK--CLALESVSDVRVVGISGMGGIGKTTLARALYEKIADQYDFHC 262

Query: 207 FALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDVT 260
           F  +V           +QK+LLS+   D N+   N+          L  K+  IV D+V 
Sbjct: 263 FVDDVNNIYRHSSSLGVQKQLLSQCLNDENLEICNVSKGTYLVSTMLRNKRGLIVLDNVG 322

Query: 261 S---------------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
                                 GSR+IIT+RD+ +L+    N  Y+++ L + +A KLFC
Sbjct: 323 QVEQLHMFTQSRETLLRECLGGGSRIIITSRDEHILRTHGVNHVYQVQPLSWDNAVKLFC 382

Query: 300 QWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE 359
             AF   ++ + +  LT   + +AQG PLA++V+G  L GR+   W S + +L       
Sbjct: 383 INAFKCTYIMSDYEMLTHGVLSHAQGHPLAIEVIGKSLFGRNVSQWTSTLDRLRDNKSRN 442

Query: 360 IEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLIN 406
           I +VL+ISYD L++  + +FLDIACF   +H   V  I +               KSLI 
Sbjct: 443 IMDVLRISYDDLEEKDREIFLDIACFFNDDHEQHVKEILNFRGFDPEIGLPILVEKSLIT 502

Query: 407 LDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
           +     I MHDLLRD+G+ IVR++S   P K +RLW  +DIY+V+  N            
Sbjct: 503 ISDGL-IHMHDLLRDLGKCIVREKSPKEPRKWSRLWDFEDIYKVMSDNM----------- 550

Query: 467 MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN 526
                            +P LR L     KN   V +    P             L +LN
Sbjct: 551 ----------------PLPNLRLLDVSNCKNLIEVPNFGEAP------------NLASLN 582

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE--NLE 584
           +C          C ++ QL        SS+   +      + +C+ L  LP  ++  NLE
Sbjct: 583 LCG---------CIRLRQLH-------SSIGLLRKLTILNLKECRSLTDLPHFVQGLNLE 626

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            L ++G   +R++  S+G L  +  L L +  +L  IP +I  L+ L  L +S C +L  
Sbjct: 627 ELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLNSLECLSLSGCSKLYN 686

Query: 644 L 644
           +
Sbjct: 687 I 687



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 125/302 (41%), Gaps = 30/302 (9%)

Query: 572  MLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
            +L  LP  L  +  L +    + ++P++ G L  +++L L  N N E +P S++ LSKL 
Sbjct: 744  LLPSLPI-LSCMRELDLSFCNLLKIPDAFGNLHCLEKLCLRGN-NFETLP-SLKELSKLL 800

Query: 632  FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP-AGLSSMSSVLYVNLCNFLKLDPNE 690
             L + HC+RL+ LPELP    + S     S  KL    + +   VL +N+ N  +L   +
Sbjct: 801  HLNLQHCKRLKYLPELPSRTDVPSP----SSNKLRWTSVENEEIVLGLNIFNCPELVERD 856

Query: 691  LSEIVKDGWMKHSLYEERGIKK-------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRP 743
                +   WM   +      K        S   PG++IP+WF  Q +G    +K      
Sbjct: 857  CCTSMCLSWMMQMVQAFSKPKSPWWIPFISSIIPGSKIPRWFDEQHLGMGNVIKIEHASD 916

Query: 744  ---AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFL 800
                 +N  I  A C+V+  P   +  RH     D          +   +   ++   F 
Sbjct: 917  HFMQHHNNWIGIA-CSVIFVPHKERTMRHPESFTD----------ESDERPCFYIPLLFR 965

Query: 801  GKISYVESDHVFLGCNSFGGEYFGPNYDEFS-FRIHCSFHFPPYLERGEVKKCGIHFVYA 859
              +   ESDH+ L   +     F  +++     ++ C+   P      EVKK G   VY 
Sbjct: 966  KDLVTDESDHMLLFYYTRESFTFLTSFEHHDELKVVCASSDPDQYFDVEVKKYGYRRVYR 1025

Query: 860  QD 861
             D
Sbjct: 1026 HD 1027


>gi|280967725|gb|ACZ98531.1| ARGH17 [Malus x domestica]
          Length = 1056

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 271/963 (28%), Positives = 420/963 (43%), Gaps = 234/963 (24%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HLH  L  +  + ++D D L RG+ I + L   IE S I+II
Sbjct: 19  YDVFLSFRGEDTRKGFTGHLHAALKDRGYQAYMDEDDLNRGEEIKEDLFRAIEGSRISII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S W                      FY VDPSHVRKQ     + F + +K  
Sbjct: 79  VFSKGYADSSWCLDELVKIMECRSKLRRHVLPIFYHVDPSHVRKQDGDLAKAFQKHKKGI 138

Query: 100 P------------EKMKRWKNALTEAADLSGFDSNVIR--PESKLIEEIAND-VLKRLDA 144
                        E++K+W+NALTEAA+LSG    +     E+  I+ I ++ + + L +
Sbjct: 139 SKLKDGKKREAKRERVKQWRNALTEAANLSGHHLQITENGSEADFIKIIVDENICEWLTS 198

Query: 145 TFQSKNKGL-VGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHF 202
           T +       VG++  I++I + L  G S  V  + IWG+GG+ K T+A A++N+I   F
Sbjct: 199 TNELHVANYPVGIDSRIQDIITYLSSGGSNDVRMVGIWGMGGVGKTTVAKAIYNQIHPMF 258

Query: 203 EGSYFALNVREAEETGGIKDLQKKLLSELSK--------DGNMRNIESQLNRLARKKVRI 254
           +   F  +VR+A    G+ DLQ KL+S++ K        D  +  I+ Q      K+V +
Sbjct: 259 QFKSFLADVRDATSKHGLVDLQNKLISDILKKKPEISCVDEGIVMIKQQFRH---KRVLV 315

Query: 255 VFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLF 298
           + D++                  GSR+I+TTRD+ +LK    +  Y  ++    +A +LF
Sbjct: 316 IMDNIDEVEQLDAIVGNHDWFGPGSRIILTTRDEHLLKRGKVHNIYPAQKFNEGEALELF 375

Query: 299 CQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV 358
              AFG    +  + EL+ K                 +L  R+   W+S + KLE  P  
Sbjct: 376 SWHAFGNGCPNKGYHELSKKV----------------FLLWRTMAEWKSQLEKLERTPDG 419

Query: 359 EIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFY----- 411
           +I   L+IS+D LDD QK +FLDI+CF  G  +D V    D     + I + +       
Sbjct: 420 KIITPLRISFDGLDDKQKAIFLDISCFFIGMDKDNVAKALDVCGFSATIEISILRERCLV 479

Query: 412 -----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
                ++ +HDLLR+M + I+ ++S  HP K +RLW+H+++  VL+  +GTE +EG++L 
Sbjct: 480 TVEDKKLNVHDLLREMAKVIISEKSPGHPEKWSRLWNHQEVVDVLRNKSGTEEVEGLALH 539

Query: 467 MNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN 526
               +     N+ AF+ M KLR L  Y  +      HL      E+  L W +C LK++ 
Sbjct: 540 KPFSHDNSSFNTEAFANMKKLRLLLLYKVELNGEYKHLP----KELMWLRWEECLLKSIP 595

Query: 527 ---ICAEKLVSLKMPCTKVEQLWDDVQRLPS--------SLCTFKTPITFEI-------- 567
                  +LV L+M  + + Q+W+  + L +        S    K+P   ++        
Sbjct: 596 DDFFNQPRLVVLEMQRSYLVQVWEGSKSLQNLKIIDLTRSYSLIKSPDFSQVPNLEELIL 655

Query: 568 -----IDCKMLERLP---------------------------DELENLEYLTVKGTTIRE 595
                + C+ML  LP                            E+ +L  L    T IR+
Sbjct: 656 EGCESLGCRMLTSLPRDFYKSKSVETLCLNDCSEFREVHEDLGEMISLRILEADFTAIRQ 715

Query: 596 LPESLGRLSWVKRLILSN-----NSNL-----ERIPESIRH------------------- 626
           +P S+ RL  + RL L N      S+L       +P S+R                    
Sbjct: 716 IPTSIVRLKNLTRLSLINPIFRRGSSLIGVEGIHLPNSLRELSLSVCKLDDDAIKNLGSL 775

Query: 627 ---------------------LSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
                                LSKL  L +S C  L T+P+L  NL +L    C +LE +
Sbjct: 776 ISLQYLDLGWNKFHTLPSLSGLSKLETLQLSGCMYLHTIPDLLTNLKVLHVDECPALETM 835

Query: 666 PAGLSSMSSV--LYV--------------NLCNFLKLDPNELSEIVKD-------GWMKH 702
           P   S MS++  L+V              +L + + +D +E + +  D       GW   
Sbjct: 836 P-NFSEMSNIRQLHVSHSPKLTEVPSLDKSLNSMIWIDMHECTNLTADFRKNILQGWTSC 894

Query: 703 SLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF----AFCAVV 758
                      +   GN +P WF   + G+  +    P     +  L  F     F A +
Sbjct: 895 GF-------GGIALHGNYVPDWFEFVNEGAKVSFDIPPTHDRTFEGLTLFFLYRPFKATI 947

Query: 759 VFP 761
           + P
Sbjct: 948 LNP 950


>gi|227438257|gb|ACP30618.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1016

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 229/752 (30%), Positives = 378/752 (50%), Gaps = 93/752 (12%)

Query: 25  LSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW------------- 71
           L  K I  FID+++ RG++I   L+  I  S IAII+ S  YASS+W             
Sbjct: 3   LERKGITPFIDNEIRRGESIGPELIRAIRGSKIAIILISRNYASSKWCLDELVEIMKCRE 62

Query: 72  --------FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEKMKRWKNALTEAADLSGFDSN 122
                    FY VDPS+V+K +  FG+ F +    +  E +KRW+ A  + A ++G+ S+
Sbjct: 63  ELGQTVMPVFYEVDPSNVKKLTGDFGKVFRKTCAGKTKECIKRWRQAFAKVATIAGYHSS 122

Query: 123 VIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKLRIWG 181
               E+ +I++I  D+   L+    S +   L+G+E  +E+++ LLC+GS+ V  + IWG
Sbjct: 123 NWDNEADMIKKITTDISNMLNNFTPSNDLDELIGMEAQLEKMKPLLCLGSDEVRMIGIWG 182

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVRE------AEETGGIKDLQKKLLSELS--K 233
             GI K TIA   FN++S  F+ S F  +++       +++      L ++ +S+++  K
Sbjct: 183 PPGIGKTTIARFAFNQLSNRFQLSVFMDDLKPNPTRLCSDDYSLKLQLHQRFMSQITNHK 242

Query: 234 DGNMRNIESQLNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKN 277
           D  + ++    NRL  KKV +V D V                  GSR+IITT+D+++ + 
Sbjct: 243 DMVVSHLGVASNRLKDKKVLVVLDGVDRSVQLDAVAKEAWWFGPGSRIIITTQDRRIFRA 302

Query: 278 CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYL 337
              N  Y++       A ++FC ++FG         EL  +  + +  +PL L+V+G Y 
Sbjct: 303 HGVNHIYKVDFPTSDAALQIFCTYSFGQKSPKDGFEELAREVTQLSGELPLGLRVMGSYF 362

Query: 338 CGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISI 397
            G SK+ W +A+ +L      +I  +LK SYD+LDD  K +FL IAC  + E  +EV   
Sbjct: 363 KGMSKQEWINAIPRLRTSLDSDIGSILKFSYDALDDEDKYLFLYIACCYKSEWINEVEEY 422

Query: 398 FD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHH 444
                            KSLI++ L   I MH LL+ +GREIV K+S   PG+R  L+  
Sbjct: 423 LAKKFVEVRQRLNVLVDKSLISISLLGVIEMHSLLKKLGREIVCKQS-QEPGQRQFLYDE 481

Query: 445 KDIYQVLKKN-TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF----YGDKNKC 499
           +++ +VL  + TG++++ GI+LD ++  +EI ++  AF  M  L+FL+     +  K+  
Sbjct: 482 REVCEVLTGDATGSKSVIGINLDYSREGKEIDISEKAFEGMSNLQFLKVSCSHFTMKSTR 541

Query: 500 MVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS--- 554
            +S+L      ++R L+W  CP+     N+  E LV L M  +K+E+LW+  + L S   
Sbjct: 542 GLSYLP----HKLRLLKWSHCPMTCFPCNVNFEFLVELSMSNSKLEKLWEVTKPLRSLKR 597

Query: 555 ----------SLCTFKTPITFEIIDCKMLERLPDELEN-LEYLTVKG-TTIRELPESLGR 602
                      L T        + +C  L +LP    N ++ L +KG +++ E P  +G 
Sbjct: 598 MDMRNSKELPDLSTATNLKRLNLSNCSSLIKLPSLPGNSMKELYIKGCSSLVEFPSFIGN 657

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNC 659
              ++ L LS+  NL  +P  + + + L  L +  C  L  LP    NL     L  + C
Sbjct: 658 AVNLETLDLSSLPNLLELPSFVENATNLKKLDLRFCSNLVELPFSIGNLQKLWWLELQGC 717

Query: 660 TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPN 689
           + LE LP  + ++ S+ ++NL  C+ LK  P 
Sbjct: 718 SKLEVLPTNI-NLKSLYFLNLSDCSMLKSFPQ 748



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 48/236 (20%)

Query: 525 LNICAEKLVSLKMPCTKVEQLW-------DDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           L  C+  LV L      +++LW         ++ LP+++   K+     + DC ML+  P
Sbjct: 690 LRFCS-NLVELPFSIGNLQKLWWLELQGCSKLEVLPTNI-NLKSLYFLNLSDCSMLKSFP 747

Query: 578 DELENLEYLTVKGTTIRELPESLG--------RLSWVKRLILS------------NNSNL 617
               NLE L ++GT I ++P S+         ++S+ + L  S             ++ +
Sbjct: 748 QISTNLEKLDLRGTAIEQVPPSIRSRPCSDILKMSYFENLKESPHALERITELWLTDTEI 807

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
           + +P  ++ +S+L+ L +  C +L ++P L  ++  + A +C SLE +       +  ++
Sbjct: 808 QELPPWVKKISRLSQLVVKGCRKLVSVPPLSDSIRYIDASDCESLEMIECSFP--NQFVW 865

Query: 678 VNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY--FPGNEIPKWFRHQSMG 731
           +   N  KL+    + I               I+KS +   PG ++P +F H+++G
Sbjct: 866 LKFANCFKLNQEARNLI---------------IQKSEFAVLPGGQVPAYFTHRAIG 906


>gi|15237516|ref|NP_198907.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007232|gb|AED94615.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1104

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 232/737 (31%), Positives = 366/737 (49%), Gaps = 101/737 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH+    K I  F D ++ RG  I   L+  I  S ++I++
Sbjct: 12  YHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKDQEIERGHTIGPELIQAIRESRVSIVV 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE+YASS W                      FY+VDPS VRKQ   FG  F +  +   
Sbjct: 72  LSEKYASSCWCLDELVEILKCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKT 131

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             +K RW  AL   A ++G  S     E++LI++IA DV  +L+ T     +G+VG+E  
Sbjct: 132 WIVKQRWIKALEYIATVAGEHSLSWANEAELIQKIATDVSNKLNLTPSRDFEGMVGLEAH 191

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + +++S LC+ S+ V  + IWG  GI K TIA A+FN++S  F  S F +   +  +   
Sbjct: 192 LTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCF-MGTIDVNDYDS 250

Query: 220 IKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------------- 261
              LQ KLLS++   KD  + ++ +    L  ++V IV DDV                  
Sbjct: 251 KLCLQNKLLSKILNQKDMKIHHLGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWFGH 310

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSR+I++  D+++LK    N  Y +      +A ++ C  AF  +       E+  + ++
Sbjct: 311 GSRIIVSLNDRKILKAHGINDIYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVE 370

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
               +PL L+V+G    G S++ W   +  +E     +IE VL++ YD L +  +++FL 
Sbjct: 371 LCGKLPLGLRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQSLFLH 430

Query: 382 IACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF   +  D V ++               A+KSL++ + +  I MH LL+ +GR++V 
Sbjct: 431 IACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLVSTNGW--ITMHCLLQQLGRQVVV 488

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           ++    PGKR  L   K+I  VL   TGTE++ GIS D++K+   + ++  AF++M  L+
Sbjct: 489 QQ--GDPGKRQFLVEAKEIRDVLANETGTESVIGISFDISKI-ETLSISKRAFNRMRNLK 545

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLW 546
           FL FY + +  ++  +E +P   +R L W   P K+L +    E LV L M  +K+E+LW
Sbjct: 546 FLNFY-NGSVSLLEDMEYLP--RLRLLYWGSYPRKSLPLTFKPECLVELYMGFSKLEKLW 602

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
             +Q L +                  L+++     NL Y     + ++E+P +L + + +
Sbjct: 603 GGIQPLTN------------------LKKI-----NLGY----SSNLKEIP-NLSKATNL 634

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS-----ARNCTS 661
           K L L+   +L  IP SI +L KL  L+ S C +LQ +P    N+ L S       NC+ 
Sbjct: 635 KTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPT---NINLASLEEVNMSNCSR 691

Query: 662 LEKLPAGLSSMSSVLYV 678
           L   P  +SS    LYV
Sbjct: 692 LRSFP-DISSNIKRLYV 707


>gi|15227315|ref|NP_179279.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|3757516|gb|AAC64218.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
 gi|330251451|gb|AEC06545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1109

 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 256/882 (29%), Positives = 401/882 (45%), Gaps = 164/882 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R +F SH         I  F D +++R   I+ SL   I  S I+I+I
Sbjct: 12  YRVFASFHGPDVRKSFLSHFRKQFICNGITMFDDQKIVRSQTIAPSLTQGIRESKISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YASS W                      FY VDPS VRKQ+  FG  F++   R  
Sbjct: 72  LSKNYASSTWCLNELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGTVFNKTCARRT 131

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           EK +R W  AL    +++G        E+++IE+IA DV ++L+ T  S   G+VG+E  
Sbjct: 132 EKERRNWSQALNVVGNIAGEHFLNWDNEAEMIEKIARDVSEKLNMTPSSDFDGMVGIEAH 191

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKIS-RHFEGSYFALNVREAEETG 218
           ++E+E LL    +GV  + I+G  GI K TIA A+ + +  + F+ + F  N+R +   G
Sbjct: 192 LKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSLLLFKKFQLTCFVDNLRGSYPIG 251

Query: 219 ----GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
               G+K  LQ+ LLS++     MR  ++ +   RL   KV I+ DDV            
Sbjct: 252 IDEYGLKLRLQEHLLSKILNQDGMRISHLGAVKERLCDMKVLIILDDVNDVKQLEALAND 311

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSRVI+TT +K++L+    +  Y +       A ++ C +AF           L
Sbjct: 312 TTWFGPGSRVIVTTENKEILQRHGIDNMYHVGFPSDEKAMEILCGYAFKQSSPRPGFNYL 371

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             K       +PL L+V+G  L G+ ++ W+S +R+L+ I   +IE+VL++ Y+SL +++
Sbjct: 372 AQKVTWLCGNLPLGLRVVGSSLRGKKEDEWKSVIRRLDTIIDRDIEDVLRVGYESLHENE 431

Query: 376 KNVFLDIACFLEGEHRDEV--------ISIFDASKSLINLDLFY-----RIRMHDLLRDM 422
           +++FL IA F   +  D V        + I    K L+N  L Y      IRMH LL+ +
Sbjct: 432 QSLFLHIAVFFNCKDVDLVKAMLADDNLDIAHGLKILVNKSLIYISTTGEIRMHKLLQQV 491

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR+ + ++    P KR  L + ++I  VL+ + GT  + GIS D + ++ E+ +++ A  
Sbjct: 492 GRQAINRQ---EPWKRLILTNAQEICYVLENDKGTGVVSGISFDTSGIS-EVILSNRALR 547

Query: 483 KMPKLRFLRFYG---DKNKCMVSHL-EGVPF-AEVRHLEWPQCPLKTLNI--CAEKLVSL 535
           +M  LRFL  Y    D N  M  H+ E + F   +R L W   P K+L +  C E LV L
Sbjct: 548 RMSNLRFLSVYKTRHDGNNIM--HIPEDMKFPPRLRLLHWEAYPSKSLPLGFCLENLVEL 605

Query: 536 KMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLPDE 579
            M  +++E+LW+  Q L +                 L         E+ DC+ L  LP  
Sbjct: 606 NMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNATNLERLELCDCRALVELPKS 665

Query: 580 LENL-----------------------------------------------EYLTVKGTT 592
           + NL                                               E L + GT+
Sbjct: 666 IGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNIERLLLIGTS 725

Query: 593 IRELPESLGRLSWVKRLILSNNSNL--------------------ERIPESIRHLSKLTF 632
           + E+P S+   S +    + NN +L                    E+IP+ I+    L  
Sbjct: 726 VEEVPASIRHWSSLSDFCIKNNEDLKSLTYFPEKVELLDLSYTDIEKIPDCIKGFHGLKS 785

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           L ++ C +L +LPELP +LGLL A +C SLE +   L++ S+ L  N  N  KL      
Sbjct: 786 LDVAGCRKLTSLPELPMSLGLLVALDCESLEIITYPLNTPSARL--NFTNCFKLGEESRR 843

Query: 693 EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
            I++    +        +      PG  +P  F  ++ G+++
Sbjct: 844 LIIQRCATQF-------LDGYACLPGRVMPDEFNQRTSGNNS 878


>gi|297791235|ref|XP_002863502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309337|gb|EFH39761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1161

 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 303/1093 (27%), Positives = 446/1093 (40%), Gaps = 256/1093 (23%)

Query: 4    VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
            VF++FRG D R  F SHL        I    DD   RG  I + LL  IE S IA+ IFS
Sbjct: 16   VFINFRGADIRFGFVSHLVEAFKKHKINFVYDDYEDRGQPI-EILLTRIEQSRIALAIFS 74

Query: 64   ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
             +Y  S W                      FY+V+PS VR     FG  F  L K   EK
Sbjct: 75   GKYTESFWCLEELTKIRNCEKEGKLVAIPIFYKVEPSTVRYLMGEFGDSFRSLPKD-DEK 133

Query: 103  MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-------------------- 142
             K W+ AL     + G   N    ES++I++I  DV K L                    
Sbjct: 134  KKEWEEALNVIPGIMGIIVNERSSESEIIKKIVEDVKKVLYKFPSEESQKASVVPLENSN 193

Query: 143  DATFQSKNK-GLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISR 200
              TF  K K    G +  ++++E  L +   +G   + + G+ GI K T+   +F+   R
Sbjct: 194  TVTFSGKEKHKTFGNKQRLKDLEEKLDVDRYKGTRIIGVVGMPGIGKTTLLKELFDLWQR 253

Query: 201  HFEGSYFALNVREAEETGGIKDLQKKLLSEL-------SKDGNMRNIESQLNRLARKKVR 253
             F    F   +RE     G+  L + LL EL         D +        ++L  ++V 
Sbjct: 254  KFNSRAFIDQIRENSNDPGLDSLPQMLLGELLPSLKDPEIDDDEDPYRKYKDQLLERRVL 313

Query: 254  IVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
            ++ DDV+                 GSR++I T D  +LK       Y +++L + D   L
Sbjct: 314  VILDDVSKSEQIDALFRRRDWISEGSRIVIATNDMSLLKG-LVQDTYVVRQLNHQDGMDL 372

Query: 298  FCQWAFGGDHLDASHIE---LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
            F   AF  +       +   +++  + YA+G PLALK+LG  LCG+ +  WE  ++ L  
Sbjct: 373  FHYHAFNSNRATPPKGDFNKMSEDFVHYAKGHPLALKILGIELCGKERTTWEEKLKLLAK 432

Query: 355  IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS------------- 401
             P   I  VL++SY+ L   QK+ FLDIACF   E  D V S+  +S             
Sbjct: 433  SPSPYIGSVLQVSYEELSPGQKDAFLDIACF-RSEDVDYVESLLASSDLGSAEAMNAVKA 491

Query: 402  ---KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKK 453
               K LIN     R+ MHDLL    RE+  K S     +  RLWHHK++ +     VL+ 
Sbjct: 492  LADKCLINT-CDGRVEMHDLLYTFARELDSKASTC--SRERRLWHHKELIRGGDVDVLQN 548

Query: 454  NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--KNKCMVSH----LEG- 506
                  + GI LD+++V  E  ++   F  M KLR+L+FY     +KC  ++    L+G 
Sbjct: 549  KMRAANVRGIFLDLSEVKGETSLDKDHFKCMTKLRYLKFYNSHCPHKCKTNNKINILDGL 608

Query: 507  -VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP---------- 553
             +   EVR L W + PL+ L  +     LV LK+P ++++QLW+  + +P          
Sbjct: 609  MLTLKEVRCLHWLKFPLEKLPNDFYPNNLVDLKLPYSEIKQLWEGDKDIPVLKWVDLNHS 668

Query: 554  SSLCTF----------------------------KTPITFEIIDCKMLERLPDELENLEY 585
            S LC+                             K+  T  +  C   +  P   ENLE 
Sbjct: 669  SKLCSLSGLSKAQNLQVLNLEGCTSLKSLGDVNSKSLKTLTLSGCSNFKEFPLIPENLEA 728

Query: 586  LTVKGTTIRELPESL------------------------GRLSWVKRLILSN-------- 613
            L + GT I +LP++L                        G L  +++L+LS         
Sbjct: 729  LYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQKLVLSGCLKLKEFS 788

Query: 614  ---------------------------------NSNLERIPESIRHLSKLTFLFISHCER 640
                                             N NL  +P  I  LS+LT L + +C++
Sbjct: 789  EINKSSLKFLLLDGTSIKTMPQLPSVQYLCLSRNDNLSYLPAGINQLSQLTRLDLKYCKK 848

Query: 641  LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY----VNLCNFLKLDPNELSEIVK 696
            L ++PELP NL  L A  C+SL  +   L+ +   +      N  N   L+   + EI  
Sbjct: 849  LTSIPELPPNLQYLDAHGCSSLNTVAKPLARIMPTVQNRCTFNFTNCDNLEQAAMDEITS 908

Query: 697  DGWMKHSL-------YEERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
                K          Y E    ++++   FPG E+P WF H+  GS   L  R   P  +
Sbjct: 909  FAQSKCQFLSDARKHYNEGFSSEALFTTCFPGCEVPSWFSHEERGS---LMQRKLLPHWH 965

Query: 747  NKLIS-FAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEG--------HLYS 797
            +K +S  A CAVV FPA         G+       ++V C +  K +          + S
Sbjct: 966  DKSLSGIALCAVVSFPA---------GQTQISS--FSVACTFTIKVQEKSWIPFTCQVGS 1014

Query: 798  WFLGKISYVESDHVFLG---CNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKK--- 851
            W   K   +ESDHVF+    C          N D+ +F    S  F       E+ K   
Sbjct: 1015 WEGDKEDKIESDHVFIAYITCPHTIRCLEDENSDKCNF-TEASLEFNVTGGTSEIGKFTV 1073

Query: 852  --CGIHFVYAQDS 862
              CG+  VYA+D+
Sbjct: 1074 LRCGLSLVYAKDN 1086


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 202/588 (34%), Positives = 304/588 (51%), Gaps = 103/588 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLS+RGEDTRDNF +HL+                         L+   + S I +++
Sbjct: 21  YDVFLSYRGEDTRDNFITHLY-----------------------AELIHLYDESMIYVVV 57

Query: 62  FSERYASSRWFFYRVDPSHVRKQSHSFG---RHFSRLRKRFPEKMKRWKNALTEAADLSG 118
            SE YASS W             S   G   RH S  R +            T A+    
Sbjct: 58  LSENYASSTWCL-----KFTSNGSWELGPNRRHVSFYRLK------------TNAS---- 96

Query: 119 FDSNVIRPESKLIEEIANDVL--KRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCK 176
           F  N +  ++ LIE+I  D+L   +L+ +F +  +G++G++  IE+I  L          
Sbjct: 97  FFFNYVTGQNTLIEDIVKDILIKLKLNCSFLNDYQGMIGIDNHIEQIPLL---------- 146

Query: 177 LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGN 236
                I    K TIA A++ K++  F  +   LNV++  E  G+  +Q K   EL  + N
Sbjct: 147 ----HIESRRKTTIASAIYRKLATQFSFNSIILNVQQEIERFGLHHIQSKYRFELLGENN 202

Query: 237 MRN--IESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNC 278
             +    S   RL   K  +V DDV +                GSR+I+T+RD QVLKN 
Sbjct: 203 TSSGLCLSFDQRLKWTKALLVLDDVNNSDQLRDLIGKLSKFAPGSRIIVTSRDMQVLKNV 262

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
            A+  Y +KE+ + ++ +LFC  AF   +    ++ L++  + YA+ VPLALKVLG  LC
Sbjct: 263 KADGIYEVKEMNFHESLRLFCLNAFKQSYPLEGYVGLSENILNYAKRVPLALKVLGFLLC 322

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
           GR KE WES ++KL+ +P  +I EVLK+SY  LD+ Q  +FLDIACF  G   + V+   
Sbjct: 323 GRPKEAWESQLQKLDKLPENDIFEVLKLSYVELDEEQNEIFLDIACFYRGHLENVVLQTL 382

Query: 399 DAS--KSLINLDLF----------YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
           D+    SLI +++            RI MHDL+++MG EIV ++ +N PGKR+RLW H++
Sbjct: 383 DSCGFSSLIGIEVLKDRGLISIVESRIVMHDLIQEMGHEIVHQQCVNDPGKRSRLWKHRE 442

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY------GDKNKCM 500
           IY+VL+ N GT+AI  I LD+ K+ + + +++  F KM  LR + FY       + N  +
Sbjct: 443 IYKVLRNNKGTDAIRCILLDICKIEK-VQLHAETFKKMDNLRMMLFYKPYGVSKESNVIL 501

Query: 501 VSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
            + LE +P  +++ L W   P K+L  +   + LV L MP + ++QLW
Sbjct: 502 PAFLESLP-DDLKFLRWDGFPQKSLPEDFFPDNLVKLYMPHSHLKQLW 548



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 18/223 (8%)

Query: 549  VQRLPSSL-CTFKTPITFEIIDCKMLERLPDELENLEYLT----VKGTTIRELPESLGRL 603
            ++ LPSSL        T  +  C  L  LP+ + NL YL+        ++ E+P ++G L
Sbjct: 804  IKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCSGCCSLTEIPNNIGSL 863

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
            S   R +    SN+  +PESI +LS L  L +S C+RL+ +P+LP +L  L A +C S+ 
Sbjct: 864  S-SLRKLSLQESNVVNLPESIANLSNLKSLDLSFCKRLECIPQLPSSLNQLLAYDCPSVG 922

Query: 664  KLPAG----LSSMS--SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY-- 715
            ++       LS++S   +   +  N  +LD    S I  + +++ +    RG  +S++  
Sbjct: 923  RMMPNSRLELSAISDNDIFIFHFTNSQELDETVCSNIGAEAFLRIT----RGAYRSLFFC 978

Query: 716  FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
            FPG+ +P  F ++  GS  T++          +L  FA C V+
Sbjct: 979  FPGSAVPGRFPYRCTGSLVTMEKDSVDCPNNYRLFGFALCVVL 1021



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCN 650
           I ELP SL  L  ++ L L     LE IP SI  LSKL+ L +++CE L+T P       
Sbjct: 710 IMELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLK 769

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           L  L    C+ L+  P  L    + +++NL
Sbjct: 770 LKKLDLHGCSMLKNFPDILEPAETFVHINL 799


>gi|359486078|ref|XP_003633382.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 441

 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 176/421 (41%), Positives = 245/421 (58%), Gaps = 47/421 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRGEDTR +FT HLH  L    I TFIDDQL RG+ IS +LL  IE S ++III
Sbjct: 21  YEVFLSFRGEDTRKSFTDHLHEALCRYGINTFIDDQLRRGEQISSALLQAIEESRLSIII 80

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ+ S+G  F++  + + 
Sbjct: 81  FSEHYASSSWCLDELTKILECVKVGGHTAFPVFYNVDPSHVRKQTGSYGVAFTKHEQVYR 140

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           + M++   W+ ALT A+ LSG+DS   R ES++I++I + +L  L     S  + LVG++
Sbjct: 141 DNMEKVLKWREALTVASGLSGWDSRD-RHESEIIKKIVSKILNELVDASSSNMENLVGMD 199

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             I+++ SLLCIGS+ V  + IWG+ GI K  IA  V+ KI   FEG  F  NV E  + 
Sbjct: 200 SRIQDLVSLLCIGSDDVRMVGIWGVAGIGKTAIAKVVYQKICTQFEGCCFLSNVSEKTQK 259

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT----------- 260
             + ++Q +LLS++  +GN+      R I      L   K  IV DDV            
Sbjct: 260 SDLANIQMELLSQILWEGNLNTRIFNRGINFIKKALHSMKALIVLDDVNHRQQLEALAGN 319

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTR++++L     +  Y  KEL   +A  LF Q AF         ++L
Sbjct: 320 HNWFGRGSRIIITTRERRLLIEKEVDATYEAKELDEDEALMLFRQHAFKHKPPIEDFVQL 379

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            D+A+ Y +G+PLALK+LGC+L  RSK+ WES + +L+ IP+ E+++VL+ S+D LDD+Q
Sbjct: 380 CDRALNYTKGIPLALKILGCFLYNRSKKEWESELERLKRIPNKEVQDVLRYSFDGLDDNQ 439

Query: 376 K 376
           K
Sbjct: 440 K 440


>gi|315507089|gb|ADU33180.1| putative TIR-CC-NBS-AAA+ATPase [Cucumis sativus]
          Length = 856

 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 231/691 (33%), Positives = 352/691 (50%), Gaps = 93/691 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFTSHLH  L  K I  FIDD +L RG+ I  SLL  IE S I+I+
Sbjct: 16  FDVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIV 75

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I SE YASS W                       FY+V+PSHVR+Q   FG  F++L+ R
Sbjct: 76  IISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVR 135

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK---NKGLVG 155
           F  KM+ W  ALT  + +SG+D      E+ LI+ I  +V K+L  +  ++    K  VG
Sbjct: 136 FSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLRNSATTELDVAKYPVG 195

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +  +  L  + S  +  + ++GIGG+ K T+A A++NKI+  FEG  F  NVREA 
Sbjct: 196 IDIQVSNL--LPHVMSNEITMVGLYGIGGMGKTTLAKALYNKIADEFEGCCFLSNVREAS 253

Query: 215 EETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------- 261
            +  G+ +LQK LL E+  D +++       I    +RL  KK+ ++ DDV +       
Sbjct: 254 NQYWGLVELQKTLLREILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDVDTHEQLQAL 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VI TTR+KQ+L +   N   R+  L   +  +LF   AF   H  + +
Sbjct: 314 AGGHHWFGHGSKVIATTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFNNCHPSSDY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLE-IIPHVEIEEVLKISYDS 370
           ++++ +A+ Y +G+PLAL+VLG +L     +  +E  + + E       I+++L+ISYD 
Sbjct: 374 LDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYENSYLDKGIQDILRISYDE 433

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRM 415
           L+   K++FL I+C    E ++EV  +                    SL+ +D F R+ M
Sbjct: 434 LEQDVKDIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEM 493

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDL++ MG  I   E+ N   KR RL   KD+  VL  +    A++ I L+ ++   E+ 
Sbjct: 494 HDLIQQMGHTIHLLETSN-SHKRKRLLFEKDVMDVLNGDMEARAVKVIKLNFHQPT-ELD 551

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           ++S  F K+  L  L+ +   N      LE +P + +R + WP+ P  +L      EKL 
Sbjct: 552 IDSRGFEKVKNLVVLKVH---NVTSSKSLEYLP-SSLRWMIWPKFPFSSLPSTYSLEKLT 607

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
            L MP + ++   +         C +   I       K LE + D     NLE L +  +
Sbjct: 608 ELSMPSSFIKHFGNGYLN-----CKWLKRINLNY--SKFLEEISDLSSAINLEELNL--S 658

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPE 622
             ++L  + G+    K+LIL NN +   IPE
Sbjct: 659 ECKKLEYADGK---YKQLILMNNCD---IPE 683


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 251/773 (32%), Positives = 395/773 (51%), Gaps = 119/773 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DT   FT +L+  L    I TF+D +QL  G+ +S  L    E S I++I
Sbjct: 23  YEVFLSFRGLDTGKGFTDNLYKALIHYGIHTFMDAEQLESGEPVSTELFKATEESLISVI 82

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S +YA+S W                       FY V PS  RKQ    G HF     +
Sbjct: 83  ILSTKYATSTWCLNELVTMVELAENNESRLVLPVFYDVTPSKARKQ---IGVHFEEEFAQ 139

Query: 99  F------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                  P K+ RWK +LTE A+LSG+D    R E+ +IEEI   +   L  TF +  K 
Sbjct: 140 HNDIEGEPGKVARWKKSLTEIANLSGYDIRNYRNEAIVIEEIVERIFGVLINTFSNDLKD 199

Query: 153 LVGVECSIEEIES--LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
            VG++  + EI+S   LC+ SE V  + I GI GI K T+A A+  +I   F+   F   
Sbjct: 200 FVGMD-RVNEIKSKMSLCMDSEEVRVIGICGIPGIGKSTVAKALSQRIRSQFDAISFISK 258

Query: 211 VREAEETGGIKDLQKKLLSEL-SKDGNMRNIESQL-NRLARKKVRIVFDDVTS------- 261
           V +  +  G+  ++K+L   L  K    ++++  +  RL  K+V I+ D+V         
Sbjct: 259 VGQISKKKGLFHIKKQLCDHLLDKKVTTKDVDDVICKRLRDKRVLIILDNVDELEQIKAV 318

Query: 262 --------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                         GSR+I+TT D+++L      + Y++++L    A  LFC+ A   DH
Sbjct: 319 AGNDSAGLSNRFGKGSRIIVTTTDERLLIYYNHREIYKIEKLTPDQALLLFCRKALKTDH 378

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEE---VL 364
              +  +L+++ + Y  G PLAL+V G  L  R ++ W + ++ L+   +   E+   VL
Sbjct: 379 PTDAFKKLSNEFVDYIDGHPLALEVFGRSLRDRKEDYWSTKLKSLKDNNYSGEEKIIGVL 438

Query: 365 KISYDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDAS--KSLINLDLFY---------- 411
           K S+D L++  QK++FLD ACF +G+    +  IF++      IN+D+            
Sbjct: 439 KASFDGLENQEQKDMFLDTACFFKGKDVCRLGKIFESCGYHPGINIDILCEKYLISMVGG 498

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
           ++ MHDLL+ MGR+IVR ES    G+R+RLWHH     VLKKN GT+ +EGI L  ++ +
Sbjct: 499 KLWMHDLLQKMGRDIVRGES-KKEGERSRLWHHTVALPVLKKNKGTKTVEGIFLSSSQPD 557

Query: 472 REIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICA 529
           + +H+    FS M  LR L+ Y  +    + +L      E+  LEW +CPLK+L  +   
Sbjct: 558 K-VHLKKDPFSNMDNLRLLKIYNVEFSGCLEYLSD----ELSLLEWHKCPLKSLPSSFEP 612

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLT 587
           +KLV L +  +++E+LW++++R    L          + DC+ L + P  D++ NLE L 
Sbjct: 613 DKLVELNLSESEIEELWEEIERPLEKLAVLN------LSDCQKLIKTPDFDKVPNLEQLI 666

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE-----------------------S 623
           ++G T++  +P+++  L  +   ILS  S L+++PE                       S
Sbjct: 667 LQGCTSLSAVPDNIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIEELPTS 725

Query: 624 IRHLSKLTFLFISHCERLQTLPELPC----NLGLLSARNCTSLEKLPAGLSSM 672
           I HL+ LT L +  C+ L +LP++ C    +L +L+   C++L +LP  L S+
Sbjct: 726 INHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSL 778



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 143/332 (43%), Gaps = 59/332 (17%)

Query: 463  ISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL 522
            I  DM ++ R++H++  A  ++P               ++HL G+    +R     +  L
Sbjct: 702  IGEDMKQL-RKLHVDGTAIEELPT-------------SINHLNGLTLLNLRDC---KSLL 744

Query: 523  KTLNICAEKLVSLKM----PCTKVEQLWDD----------------VQRLPSSLCTFKTP 562
               ++    L SL++     C+ + +L ++                +Q LP+S       
Sbjct: 745  SLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDL 804

Query: 563  ITFEIIDCKMLERLPD----ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNL 617
                + +CK L  LPD     L +L+ L + G + + ELPE+LG L  ++ L  S  + +
Sbjct: 805  TLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLESLQELYASGTA-I 863

Query: 618  ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
             ++PESI  LS+L  L    C +LQ+LP LP ++  +S  NC  L+      S+  +V  
Sbjct: 864  SQVPESISQLSQLEELVFDGCSKLQSLPRLPFSIRAVSVHNCPLLQ---GADSNKITVWP 920

Query: 678  VNLCNFLKLDPNELSEIVKDGWM--KHSLYE------ERGIKKSMYFP----GNEIPKWF 725
                 F  L+     +I +  W+  KH L+       E  I++   F      NEIP W 
Sbjct: 921  SAAAGFSFLNRQRHDDIAQAFWLPDKHLLWPFYQTFFEGAIRRDERFEYGYRSNEIPAWL 980

Query: 726  RHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
              +S  S+ T+   P    G  K I  A C +
Sbjct: 981  SRRSTESTITIPL-PHDVDGKTKWIKLALCFI 1011


>gi|30683870|ref|NP_193428.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658426|gb|AEE83826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1449

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 255/815 (31%), Positives = 385/815 (47%), Gaps = 126/815 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  KSI TFID  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL----- 95
           FS+ YASS W                      FY VDPS VRKQ+  FG+ F +      
Sbjct: 72  FSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSK 131

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            K+  ++ +RW  ALT+ A+++G D      E+ ++E+I+NDV  +L  T        VG
Sbjct: 132 DKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSNKL-ITRSKCFDDFVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-GSYFALNVREA 214
           +E  IE I+S+LC+ S+    + IWG  GI K TI  A+F+++S  F   ++        
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 250

Query: 215 EETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
            +  G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV            
Sbjct: 251 SDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+I+ T+D+Q LK    +  Y +K      A  + C+ AFG D       EL
Sbjct: 311 AEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKEL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +  K A  +PL L VLG  L  R K+ W   M +L    + +I + L++SYD L    
Sbjct: 371 AFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKD 430

Query: 376 KNVFLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIV 427
           +++FL IAC   G           D V     + KSLI +     I MH+LL  +GREI 
Sbjct: 431 QDMFLCIACLFNGFEVSYVKDLLEDNVGLTMLSEKSLIRITPDGHIEMHNLLEKLGREID 490

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--NREIHMNSYAFSKMP 485
           R +S  +PGKR  L + +DI++V+ + TGTE + GI L   +    R + ++  +F  M 
Sbjct: 491 RAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMR 550

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
            L++L+     +      L  +P  ++R L+W  CPLK+L     AE LV+L M  +K+E
Sbjct: 551 NLQYLKIGDWSDGGQPQSLVYLPL-KLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYSKLE 609

Query: 544 QLWDDVQRLPS-----SLCT--------FKTPITFEIID---CKMLERLPDELE------ 581
           +LW+    L S      LC+               E +D   C+ L  LP  ++      
Sbjct: 610 KLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLR 669

Query: 582 -------------------NLEYLT-----VKGTT-IRELPESLGRLSW----VKRL--- 609
                              NLEYL+     V+GT  I   P  L  L W    +KRL   
Sbjct: 670 KLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSN 729

Query: 610 --------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLLSARNC 659
                   +   NS+LE++ +  + L +L  +F+   + L+ +P+  L  NL  +    C
Sbjct: 730 FKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKC 789

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLD--PNELS 692
            SL   P+ + +   ++Y+++ +  KL+  P +L+
Sbjct: 790 ESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLN 824



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KLV L+M  CT +E L  DV           +  T ++  C  L   P   +++++L +
Sbjct: 963  QKLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRTFPLISKSIKWLYL 1014

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            + T I E+ + L + + ++ LIL+N  +L  +P +I +L  L  L++  C  L+ LP   
Sbjct: 1015 ENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV 1073

Query: 649  --CNLGLLSARNCTSLEKLP 666
               +LG+L    C+SL   P
Sbjct: 1074 NLSSLGILDLSGCSSLRTFP 1093



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 24/199 (12%)

Query: 501 VSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL 556
           V   +G+ +  +++R L W  CPLK L  N   E LV L+M  + +E+LWD  Q L    
Sbjct: 700 VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 759

Query: 557 CTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGRLSWVKRLILSN 613
             F       +   K L+ +PD     NLE + + K  ++   P S+     +  L +S+
Sbjct: 760 QMF-------LRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISD 812

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLP---------ELPCNLGLLSARNCTSLEK 664
              LE  P  + +L  L +L ++ C  L+  P         + P     +   +C   + 
Sbjct: 813 CKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKN 871

Query: 665 LPAGLSSMSSVLYVNLCNF 683
           LPAGL  +  ++    C F
Sbjct: 872 LPAGLDYLDCLMRCMPCEF 890



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E LV L + C K E+LW+ +Q L S           ++ + + L  +PD  +  NL++L 
Sbjct: 893  EYLVFLNVRCYKHEKLWEGIQSLGSLE-------EMDLSESENLTEIPDLSKATNLKHLY 945

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +    ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 946  LNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPL 1004

Query: 647  L----------------------PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCN 682
            +                         L  L   NC SL  LP+ + ++ ++  LY+  C 
Sbjct: 1005 ISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1064

Query: 683  FLKLDPNELS 692
             L++ P +++
Sbjct: 1065 GLEVLPTDVN 1074



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 133/347 (38%), Gaps = 72/347 (20%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            CT +E L  DV    SSL         ++  C  L   P    N+ +L ++ T I E+P 
Sbjct: 1063 CTGLEVLPTDVNL--SSLGIL------DLSGCSSLRTFPLISTNIVWLYLENTAIGEVPC 1114

Query: 599  SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER-LQTLPELPCNLGLLSAR 657
             +   + ++ L++     L+ I  +I  L  L F   + C   ++ L +      +  + 
Sbjct: 1115 CIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCRGVIKALSDATVVATMEDSV 1174

Query: 658  NCTSL--------EKLPAGLSSMS----SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLY 705
            +C  L        E+    L           Y +  N  KLD +    I+          
Sbjct: 1175 SCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSFRNCFKLDRDARELIL---------- 1224

Query: 706  EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP---- 761
              R   K +  PG EIPK+F +++ G S T+    PR +     + F  C +VV P    
Sbjct: 1225 --RSCFKPVALPGGEIPKYFTYRAYGDSLTVTL--PRSSLSQSFLRFKAC-LVVDPLSEG 1279

Query: 762  -AFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFL--GKISYVESDHVFLGCNSF 818
              F +Y     G   ++G  Y       +KS       FL   ++ + ++DH+F     F
Sbjct: 1280 KGFYRYLEVNFG---FNGKQY-------QKS-------FLEDEELEFCKTDHLFFCSFKF 1322

Query: 819  GGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADH 865
              E     +++  F+  CS           +K+CG+  +Y     ++
Sbjct: 1323 ESEM---TFNDVEFKFCCS---------NRIKECGVRLMYVSQETEY 1357


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 238/792 (30%), Positives = 380/792 (47%), Gaps = 127/792 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTRDNF  HL+  L  K ++ F D++ + RGD IS SL   +E S  ++I
Sbjct: 161 YDVFLSFRGADTRDNFGDHLYKALKDK-VRVFRDNEGMERGDEISSSLKAGMEDSAASVI 219

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  Y+ SRW                      FY VDPSHVRKQS    + F   + RF
Sbjct: 220 VISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPSHVRKQSDHIKKDFEEHQVRF 279

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               EK++ W+ ALT   +L+G+  +    +  +IE +   VL  L  T +   + +VG+
Sbjct: 280 SEEKEKVQEWREALTLVGNLAGYVCDKDSKDDDMIELVVKRVLAELSNTPEKVGEFIVGL 339

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           E  ++++  L+    S GV  L ++G+GGI K T+A A +NKI  +FE   F  ++RE +
Sbjct: 340 ESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERS 399

Query: 215 EETGGIKDLQKKLLSELSK-DGNMRNIESQLNRLA----RKKVRIVFDDVT--------- 260
               G+  LQK L+ EL +    + ++   L ++      KK+ +V DDV          
Sbjct: 400 SAENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALV 459

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   G+ ++ITTRD ++L     N++Y +K L    A KLF   +   +    + +
Sbjct: 460 GETRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEEPTKNLL 519

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLEIIPHVEIEEVLKISYDSLD 372
            L+ K ++ +  +PLA++V G  L  + +E  W++ + KL+      +++VL++S+ SLD
Sbjct: 520 ALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKSLD 579

Query: 373 DSQKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           D +K VFLDIAC FL+ E  +DEV+ +                 KSL+ +     + MHD
Sbjct: 580 DEEKKVFLDIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWMHD 639

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK-------- 469
            +RDMGR++V KES   PG R+RLW   +I  VL    GT +I GI LD  K        
Sbjct: 640 QIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARDPTA 699

Query: 470 ---VNR-------------------------------EIHMNSYAFSKMPKLRFLRFYGD 495
              V+R                               EI +   +F+ M KLR L+    
Sbjct: 700 DEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQI--- 756

Query: 496 KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP 553
            N  +  +L+ +P +E++ ++W  CPL+ L  +  A +L  L +  + + Q    VQ L 
Sbjct: 757 NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQ----VQTLR 811

Query: 554 SSLCTF-------KTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
           + + +F       K  +  +I+  K         ENL+ + ++G    E    L     +
Sbjct: 812 NKMVSFLLSCSMGKHIVLSQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPDLSNHEAL 871

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSLE 663
           ++L+    + L ++P+S+ +L KL  L    C +L         L LL       C+ L 
Sbjct: 872 EKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS 931

Query: 664 KLPAGLSSMSSV 675
            LP  + +M+S+
Sbjct: 932 VLPENIGAMTSL 943



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 24/141 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDN-ISQSLLGTIEASCIAII 60
           +DVFLSF+  D R  FT  L+ VL  + ++ + +D + RG++ +  SL+  +E S   ++
Sbjct: 16  WDVFLSFQ-RDARHKFTERLYEVLVKEQVRVWNNDDVERGNHELGASLVEAMEDSVALVV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YA S W                      FY V+P  +RKQ+  +   F    KRF
Sbjct: 75  VLSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEPCMLRKQNGPYEMDFEEHSKRF 134

Query: 100 P-EKMKRWKNALTEAADLSGF 119
             EK++RW+ AL    ++ GF
Sbjct: 135 SEEKIQRWRRALNIIGNIPGF 155



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 41/286 (14%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+ L +LS + +L L NN     +P S+  LS L  L +  C  L+ LP LPC L  L
Sbjct: 1253 KIPDDLEKLSCLMKLNLGNNY-FHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL 1311

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--VKDGWM-----KHSLYE 706
            +  NC SLE + + LS ++ +  +NL N  K +D   L  +  +K  +M      +SL  
Sbjct: 1312 NLANCFSLESV-SDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAV 1370

Query: 707  ERGIKKS-------MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            ++ + K+       +  PGN +P WF         T   +P      N+ +     AVVV
Sbjct: 1371 KKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQP------NRELRGVIIAVVV 1420

Query: 760  FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH--LYSWFLGKISYVESDHVFLGCNS 817
                      ++ +DD+             K + H    +  L  +    +D + +   S
Sbjct: 1421 ------ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQLHICRYS 1474

Query: 818  FGGEYFGPNYDEF--SFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                 F P        + I      PP  +  E+K  GIH VY  D
Sbjct: 1475 ----AFHPLVTMLKDGYTIQVIKRNPPIKQGVELKMHGIHLVYEGD 1516



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 9/128 (7%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         E+ +CK L+ LP    +++ L  L ++G+ I ELPE  G+L  
Sbjct: 1093 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 1152

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L +SN   L+R+PES   L  L  L++        + ELP + G LS  N   LE L
Sbjct: 1153 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKET----LVSELPESFGNLS--NLMVLEML 1206

Query: 666  PAGLSSMS 673
               L  +S
Sbjct: 1207 KKPLFRIS 1214



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 8/127 (6%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   +      +  CK+ E LP     L++LE L +  T ++ LP S+G L  
Sbjct: 953  IKNLPESINRLQNLEILSLRGCKIQE-LPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKN 1011

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL---SARNCTSL 662
            ++ L L   ++L +IP+SI  L  L  LFI+    ++ LP  P +L  L   SA +C  L
Sbjct: 1012 LQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA-VEELPLKPSSLPSLYDFSAGDCKFL 1070

Query: 663  EKLPAGL 669
            +++P+ +
Sbjct: 1071 KQVPSSI 1077



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 26/124 (20%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKGTTIRELPESLGRLSW 605
            V+ LP    +  +   F   DCK L+++P  +    +L  L +  T I  LPE +G L +
Sbjct: 1046 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 1105

Query: 606  VKRLILSN-----------------------NSNLERIPESIRHLSKLTFLFISHCERLQ 642
            ++ L L N                        SN+E +PE    L KL  L +S+C+ L+
Sbjct: 1106 IRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLK 1165

Query: 643  TLPE 646
             LPE
Sbjct: 1166 RLPE 1169



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 16/121 (13%)

Query: 570  CKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
            C  L  LP+    + +L+ L + GT I+ LPES+ RL  ++ L L     ++ +P  I  
Sbjct: 927  CSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSL-RGCKIQELPLCIGT 985

Query: 627  LSKLTFLFISHCERLQTLPELPCNLGLLSARN------CTSLEKLPAGLSSMSSV--LYV 678
            L  L  L++        L  LP ++G L          CTSL K+P  ++ + S+  L++
Sbjct: 986  LKSLEKLYLDDT----ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFI 1041

Query: 679  N 679
            N
Sbjct: 1042 N 1042


>gi|30683875|ref|NP_849398.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658427|gb|AEE83827.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1404

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 255/815 (31%), Positives = 385/815 (47%), Gaps = 126/815 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  KSI TFID  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL----- 95
           FS+ YASS W                      FY VDPS VRKQ+  FG+ F +      
Sbjct: 72  FSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSK 131

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            K+  ++ +RW  ALT+ A+++G D      E+ ++E+I+NDV  +L  T        VG
Sbjct: 132 DKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSNKL-ITRSKCFDDFVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-GSYFALNVREA 214
           +E  IE I+S+LC+ S+    + IWG  GI K TI  A+F+++S  F   ++        
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 250

Query: 215 EETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
            +  G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV            
Sbjct: 251 SDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+I+ T+D+Q LK    +  Y +K      A  + C+ AFG D       EL
Sbjct: 311 AEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKEL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +  K A  +PL L VLG  L  R K+ W   M +L    + +I + L++SYD L    
Sbjct: 371 AFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKD 430

Query: 376 KNVFLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIV 427
           +++FL IAC   G           D V     + KSLI +     I MH+LL  +GREI 
Sbjct: 431 QDMFLCIACLFNGFEVSYVKDLLEDNVGLTMLSEKSLIRITPDGHIEMHNLLEKLGREID 490

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--NREIHMNSYAFSKMP 485
           R +S  +PGKR  L + +DI++V+ + TGTE + GI L   +    R + ++  +F  M 
Sbjct: 491 RAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMR 550

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
            L++L+     +      L  +P  ++R L+W  CPLK+L     AE LV+L M  +K+E
Sbjct: 551 NLQYLKIGDWSDGGQPQSLVYLPL-KLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYSKLE 609

Query: 544 QLWDDVQRLPS-----SLCT--------FKTPITFEIID---CKMLERLPDELE------ 581
           +LW+    L S      LC+               E +D   C+ L  LP  ++      
Sbjct: 610 KLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLR 669

Query: 582 -------------------NLEYLT-----VKGTT-IRELPESLGRLSW----VKRL--- 609
                              NLEYL+     V+GT  I   P  L  L W    +KRL   
Sbjct: 670 KLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSN 729

Query: 610 --------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLLSARNC 659
                   +   NS+LE++ +  + L +L  +F+   + L+ +P+  L  NL  +    C
Sbjct: 730 FKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKC 789

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLD--PNELS 692
            SL   P+ + +   ++Y+++ +  KL+  P +L+
Sbjct: 790 ESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLN 824



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KLV L+M  CT +E L  DV           +  T ++  C  L   P   +++++L +
Sbjct: 963  QKLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRTFPLISKSIKWLYL 1014

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            + T I E+ + L + + ++ LIL+N  +L  +P +I +L  L  L++  C  L+ LP   
Sbjct: 1015 ENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV 1073

Query: 649  --CNLGLLSARNCTSLEKLP 666
               +LG+L    C+SL   P
Sbjct: 1074 NLSSLGILDLSGCSSLRTFP 1093



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 24/199 (12%)

Query: 501 VSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL 556
           V   +G+ +  +++R L W  CPLK L  N   E LV L+M  + +E+LWD  Q L    
Sbjct: 700 VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 759

Query: 557 CTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGRLSWVKRLILSN 613
             F       +   K L+ +PD     NLE + + K  ++   P S+     +  L +S+
Sbjct: 760 QMF-------LRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISD 812

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLP---------ELPCNLGLLSARNCTSLEK 664
              LE  P  + +L  L +L ++ C  L+  P         + P     +   +C   + 
Sbjct: 813 CKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKN 871

Query: 665 LPAGLSSMSSVLYVNLCNF 683
           LPAGL  +  ++    C F
Sbjct: 872 LPAGLDYLDCLMRCMPCEF 890



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E LV L + C K E+LW+ +Q L S           ++ + + L  +PD  +  NL++L 
Sbjct: 893  EYLVFLNVRCYKHEKLWEGIQSLGSLE-------EMDLSESENLTEIPDLSKATNLKHLY 945

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +    ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 946  LNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPL 1004

Query: 647  L----------------------PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCN 682
            +                         L  L   NC SL  LP+ + ++ ++  LY+  C 
Sbjct: 1005 ISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1064

Query: 683  FLKLDPNELS 692
             L++ P +++
Sbjct: 1065 GLEVLPTDVN 1074


>gi|37574595|gb|AAQ93074.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 211/599 (35%), Positives = 323/599 (53%), Gaps = 73/599 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +Y+VF+SFRGEDTR NFT HLH  L+   I  FIDD+ L RG++I+  L+  I+ S I+I
Sbjct: 124 LYEVFISFRGEDTRKNFTGHLHEALTKAGINAFIDDEELRRGEDITTELVQAIQGSRISI 183

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FS RYA S W                      FY VDPS+VRK + SF + F  L+  
Sbjct: 184 IVFSRRYADSSWCLEELVKIMECRRTLGQLVLPIFYDVDPSNVRKLTGSFAQSF--LKHT 241

Query: 99  FPEKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             +K++RW+ ALTEA++LSG+D  + + R E+K I  I N V  +L+  + +     VG+
Sbjct: 242 DEKKVERWRAALTEASNLSGWDLKNTLDRHEAKFIRMITNQVTVKLNNRYFNVAPYQVGI 301

Query: 157 ECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +  +  I + L IG S+ V  + I G+GGI K TI  A++N+    FEG  F   VRE +
Sbjct: 302 DTRVLNISNYLGIGDSDDVRVIGISGMGGIGKTTIVKAIYNEFYERFEGKSFLEKVREKK 361

Query: 216 ETGGIKDLQKKLLSELSKDGN------------------MRNIESQLNRLARKKVRIVFD 257
               +  LQK+LL ++ +                     +R +    +    K++R +  
Sbjct: 362 ----LVKLQKQLLFDILQTKTKVSSVAVGTALVGERFRRLRVLVIVDDVDDVKQLRELVG 417

Query: 258 DVTS---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
           +  S   GSR+IITTR+++VLK    ++ YR   +   +A +L    AF      + ++ 
Sbjct: 418 NCHSFGPGSRIIITTRNERVLKEFAVDEIYRENGMDQEEALELLSWHAFKSSWCPSQYLV 477

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           LT + + Y  G+PLAL+VLG  +  RS   W S + +L++IP  EI+  LKISYD L+D 
Sbjct: 478 LTREVVNYCGGLPLALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQLKISYDGLNDH 537

Query: 375 -QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            ++ +FLDIA F  G  +++V+ I D               + L+ +    +I MHDLLR
Sbjct: 538 YKRQIFLDIAFFFIGMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLR 597

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMGR+IV  E+   P +R+RLWH KD++ VL   +GTE IEG++L++  +  E   ++ A
Sbjct: 598 DMGRDIVHAENPGFPRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLE-ETSFSTDA 656

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAEKLVSLKM 537
           F  M +LR L+     N   ++        ++R L W   PL+ + I  C   +V++ M
Sbjct: 657 FRNMKRLRLLQL----NYVRLTGGYRCLSKKLRWLCWHGFPLEFIPIELCQPNIVAIDM 711


>gi|37574599|gb|AAQ93076.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 211/599 (35%), Positives = 322/599 (53%), Gaps = 73/599 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           +Y+VF+SFRGEDTR NFT HLH  L+   I  FIDD+ L RG++I+  L+  I+ S I+I
Sbjct: 124 LYEVFISFRGEDTRKNFTGHLHEALTKAGINAFIDDEELRRGEDITTELVQAIQGSRISI 183

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FS RYA S W                      FY VDPS+VRK + SF + F  L+  
Sbjct: 184 IVFSRRYADSSWCLEELVKIMECRRTLGQLVLPIFYDVDPSNVRKLTGSFAQSF--LKHT 241

Query: 99  FPEKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             +K++RW+ ALTEA++LSG+D  + + R E+K I  I N V  +L+  + +     VG+
Sbjct: 242 DEKKVERWRAALTEASNLSGWDLKNTLDRHEAKFIRMITNQVTVKLNNRYFNVAPYQVGI 301

Query: 157 ECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +  +  I + L IG S+ V  + I G GGI K TI  A++N+    FEG  F   VRE +
Sbjct: 302 DTRVLNISNYLGIGDSDDVRVIGISGSGGIGKTTIVKAIYNEFYERFEGKSFLEKVREKK 361

Query: 216 ETGGIKDLQKKLLSELSKDGN------------------MRNIESQLNRLARKKVRIVFD 257
               +  LQK+LL ++ +                     +R +    +    K++R +  
Sbjct: 362 ----LVKLQKQLLFDILQTKTKVSSVAVGTALVGERFRRLRVLVIVDDVDDVKQLRELVG 417

Query: 258 DVTS---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
           +  S   GSR+IITTR+++VLK    ++ YR   +   +A +L    AF      + ++ 
Sbjct: 418 NCHSFGPGSRIIITTRNERVLKEFAVDEIYRENGMDQEEALELLSWHAFKSSWCPSQYLV 477

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           LT + + Y  G+PLAL+VLG  +  RS   W S + +L++IP  EI+  LKISYD L+D 
Sbjct: 478 LTREVVNYCGGLPLALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQLKISYDGLNDH 537

Query: 375 -QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLR 420
            ++ +FLDIA F  G  +++V+ I D               + L+ +    +I MHDLLR
Sbjct: 538 YKRQIFLDIAFFFIGMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLR 597

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
           DMGR+IV  E+   P +R+RLWH KD++ VL   +GTE IEG++L++  +  E   ++ A
Sbjct: 598 DMGRDIVHAENPGFPRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLE-ETSFSTDA 656

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAEKLVSLKM 537
           F  M +LR L+     N   ++        ++R L W   PL+ + I  C   +V++ M
Sbjct: 657 FRNMKRLRLLQL----NYVRLTGGYRCLSKKLRWLCWHGFPLEFIPIELCQPNIVAIDM 711


>gi|357500597|ref|XP_003620587.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|357500703|ref|XP_003620640.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495602|gb|AES76805.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495655|gb|AES76858.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1094

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 235/717 (32%), Positives = 380/717 (52%), Gaps = 96/717 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT  L   L  K I  F DD  L +G++I   LL  IE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALETKGIFAFRDDTNLQKGESIEPELLRAIEGSRVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQS----HSFGRHFSRL 95
           +FS  YASS W                      FY VDPS VRKQS     +F +H  R 
Sbjct: 80  VFSRNYASSTWCLQELEKICKCVQRSRKHILPVFYDVDPSVVRKQSGIYCEAFVKHEQRF 139

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           ++ F E + RW+ AL     +SG+D    +P++ +I++I   ++  L+      +K LVG
Sbjct: 140 QQDF-EMVSRWREALKHVGSISGWDLRD-KPQAGVIKKIVQKIMSILECKSSYISKDLVG 197

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  IE +++ L + S + VC + I G+GGI K T+A A++++IS  F  S +  +V + 
Sbjct: 198 IDSPIEALKNHLLLDSVDCVCAIGISGMGGIGKTTLAMALYDQISHRFSASCYIDDVTKI 257

Query: 215 EET-GGIKDLQKKLLSE--------LSKDGNMRNIESQLNRLARKKVRIVFDDVT----- 260
                G  + QK++L +        +S   N  ++  +  RL R+KV ++ D+V      
Sbjct: 258 YSLHDGPLNAQKQILFQTLGIEHHLISNRYNATDLIRR--RLRREKVLLILDNVNEVEQL 315

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                      +GSR+++ +RD+ +LK    +  Y++  L  A++HKLFC+ AF  +++ 
Sbjct: 316 EKIAVHREWLGAGSRIVVISRDEHILKEYGVDVFYKVPLLNMAESHKLFCRKAFKLENII 375

Query: 310 -ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
             ++  L D+ + YA G+PLA+ +LG +L GR+   W+SA+ +L   P+ ++  VL +S+
Sbjct: 376 LGNYQNLADEILSYANGLPLAITILGSFLFGRNVTEWKSALARLRESPNKDVMNVLHLSF 435

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L+++++ +FLDIACF      +EV +I +               KSLIN + +  I +
Sbjct: 436 DGLEETEQEIFLDIACFFNSWPMEEVKNILNCCGFHADIGLRVLNDKSLINTN-YSHIEI 494

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LL ++GR+IV++ S     K +R+W  K +Y V+ +N   + +E I L     N EI 
Sbjct: 495 HSLLEELGRKIVQENSSKEQRKWSRVWSKKQLYNVMVENM-QKHVEAIVL-----NEEID 548

Query: 476 MNSYAFSKMPKLRFLRF-YGDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKTL--NICA 529
           MN+   SKM  LRFL F YG    C    + G P++   ++++++W + P K L  N   
Sbjct: 549 MNAEHVSKMNNLRFLIFKYGG---C----ISGSPWSFSNKLKYVDWHEYPFKYLPSNFHP 601

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK 589
            +LV L +  +K+EQLW + + LP +L       + E++  K+L+    E  NLE L ++
Sbjct: 602 NELVELILKSSKIEQLWTNKKYLP-NLKHLDLRHSLELV--KILDF--GEFPNLEKLNLE 656

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           G   + EL  S+G L  +  L L    NL  IP +I  LS L  L +  C ++   P
Sbjct: 657 GCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSKVFKNP 713



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 28/176 (15%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + ++P+++  L  ++RL L  N N   +P S+R LSKL +L + HC  L++LP+LP    
Sbjct: 776 LSQVPDAIECLYSLERLNLEGN-NFVTLP-SLRKLSKLVYLNLQHCMLLESLPQLPSPTN 833

Query: 653 LLSARNCTSLEKLPAGL-----------SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
           ++   N       P GL              SS+ +  L  F+  + N  S      W++
Sbjct: 834 IIRENN-KYFWIWPTGLFIFNCPKLGERERCSSMTFSWLTQFI--EANSQSYPTSFDWIQ 890

Query: 702 HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
                       +  PGNEIP W  ++S+G S  +   P      N +I F  CAV
Sbjct: 891 ------------IVTPGNEIPIWINNKSVGDSIQIDRSPIMHDNNNYIIGFLCCAV 934


>gi|356545122|ref|XP_003540994.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1045

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 239/746 (32%), Positives = 371/746 (49%), Gaps = 91/746 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG DTR++FT HL   L  K I  F D+Q I +G+ +   LL  IE S + I+
Sbjct: 11  FDVFVSFRGLDTRNSFTDHLFAALQRKGIVAFRDNQNINKGELLEPELLQAIEGSHVFIV 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY V PS VRKQS  FG+ F+   +RF
Sbjct: 71  VFSKDYASSTWCLKELRKIFDRVEETGRSVLPIFYDVTPSEVRKQSGKFGKAFAEYEERF 130

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT-FQSKNKGLVG 155
               E + +W+ AL    + SG+D    +PE + IE+I  +V+  L      S +  LV 
Sbjct: 131 KDDLEMVNKWRKALKAIGNRSGWDVQN-KPEHEEIEKIVEEVMNLLGHNQIWSFSGDLVD 189

Query: 156 VECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  ++++E LL + +  V ++  IWG+ G+ K T+  A+F KIS  ++   F  ++ + 
Sbjct: 190 MDSRVKQLEELLDLSANDVVRVVGIWGMSGVGKTTLVTALFGKISPQYDARCFIDDLNKY 249

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDVTS------- 261
               G    QK+LL +    GNM   N+         RL R K  IV D+V         
Sbjct: 250 CGDFGATSAQKQLLCQALNQGNMEIHNLSHGTMLVRTRLRRLKTLIVLDNVDQVEQLENL 309

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+II +++  +LKN    K Y ++ L    A +L C+ AF  D ++  +
Sbjct: 310 ALHPEYLGEGSRIIIISKNMHILKNYGVYKVYNVQLLKKDKALQLLCKKAFKSDDIEKGY 369

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+T   +KY  G+PLA+KVLG +L  R    W SA+ +++  P  +I +VL+IS+D L+
Sbjct: 370 EEVTYDVLKYVNGLPLAIKVLGSFLFDRDVFEWRSALTRMKENPSKDIMDVLRISFDGLE 429

Query: 373 DSQKNVFLDIAC-FLEGEHRD--------EVISIFDA-----------SKSLINLDLFYR 412
             +K +FLDI C FL G+ +D        E I  +              KSLI+ D +  
Sbjct: 430 TMEKEIFLDIVCFFLSGQFQDYDRRSIPPEKILGYRGFYPKIGMKVLVEKSLISFDRYSN 489

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           I+MHDLL+++G+ IVR+++   P K +RLW +KD+ +V+ +N   + +E I +   K   
Sbjct: 490 IQMHDLLKELGKIIVREKAPKQPRKWSRLWDYKDLQKVMIENKEAKNLEAICICNEKYQD 549

Query: 473 EI---HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NI 527
           E     M   A SKM  L+ L         ++++L      E+R+L W   P  ++  + 
Sbjct: 550 EFLQQTMKVDALSKMIHLKLLMLKNVNFSGILNYLSN----ELRYLYWDNYPFLSMPSSF 605

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT 587
             ++LV L +P + ++QLW D + LP +L       +  +I+   L  +P    +L  L 
Sbjct: 606 HPDQLVELILPYSNIKQLWKDTKHLP-NLKDLDLSHSQNLIEMPDLSGVP----HLRNLN 660

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           ++G T I  +  S+G L  +  L L N  NL      I  LS LT L +S C +L T   
Sbjct: 661 LQGCTKIVRIDPSIGTLRELDSLNLRNCINLFLNLNIIFGLSSLTVLNLSGCSKLLT--- 717

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSM 672
              N  L   R    +EK+    SS+
Sbjct: 718 ---NRLLQKPRETEHMEKIDENRSSI 740



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 44/195 (22%)

Query: 573 LERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           L R P     L  L +    + ++P+++G L  +  L L  N     +P +I+ LS+L  
Sbjct: 774 LSRFP----RLFVLDLSFCNLLQIPDAIGNLHSLVILNLGGNK-FVILPNTIKQLSELRS 828

Query: 633 LFISHCERLQTLPELPCN--------LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
           L + HC++L+ LPELP           G L+  NC +L ++         V + +  +F 
Sbjct: 829 LNLEHCKQLKYLPELPTPKKRKNHKYYGGLNTFNCPNLSEMEL---IYRMVHWQSSLSFN 885

Query: 685 KLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
           +LD                          +  PG EIP+WF  Q+ G S ++   P    
Sbjct: 886 RLD--------------------------IVIPGTEIPRWFSKQNEGDSISMDPSPLMED 919

Query: 745 GYNKLISFAFCAVVV 759
                I  A CA++V
Sbjct: 920 P--NWIGVACCALLV 932


>gi|5302807|emb|CAB46048.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268446|emb|CAB80966.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1317

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 255/815 (31%), Positives = 385/815 (47%), Gaps = 126/815 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  KSI TFID  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL----- 95
           FS+ YASS W                      FY VDPS VRKQ+  FG+ F +      
Sbjct: 72  FSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVSK 131

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            K+  ++ +RW  ALT+ A+++G D      E+ ++E+I+NDV  +L  T        VG
Sbjct: 132 DKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSNKL-ITRSKCFDDFVG 190

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-GSYFALNVREA 214
           +E  IE I+S+LC+ S+    + IWG  GI K TI  A+F+++S  F   ++        
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 250

Query: 215 EETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
            +  G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV            
Sbjct: 251 SDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 310

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                SGSR+I+ T+D+Q LK    +  Y +K      A  + C+ AFG D       EL
Sbjct: 311 AEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKEL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +  K A  +PL L VLG  L  R K+ W   M +L    + +I + L++SYD L    
Sbjct: 371 AFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKD 430

Query: 376 KNVFLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIV 427
           +++FL IAC   G           D V     + KSLI +     I MH+LL  +GREI 
Sbjct: 431 QDMFLCIACLFNGFEVSYVKDLLEDNVGLTMLSEKSLIRITPDGHIEMHNLLEKLGREID 490

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--NREIHMNSYAFSKMP 485
           R +S  +PGKR  L + +DI++V+ + TGTE + GI L   +    R + ++  +F  M 
Sbjct: 491 RAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMR 550

Query: 486 KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE 543
            L++L+     +      L  +P  ++R L+W  CPLK+L     AE LV+L M  +K+E
Sbjct: 551 NLQYLKIGDWSDGGQPQSLVYLPL-KLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYSKLE 609

Query: 544 QLWDDVQRLPS-----SLCT--------FKTPITFEIID---CKMLERLPDELE------ 581
           +LW+    L S      LC+               E +D   C+ L  LP  ++      
Sbjct: 610 KLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLR 669

Query: 582 -------------------NLEYLT-----VKGTT-IRELPESLGRLSW----VKRL--- 609
                              NLEYL+     V+GT  I   P  L  L W    +KRL   
Sbjct: 670 KLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSN 729

Query: 610 --------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLLSARNC 659
                   +   NS+LE++ +  + L +L  +F+   + L+ +P+  L  NL  +    C
Sbjct: 730 FKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKC 789

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLD--PNELS 692
            SL   P+ + +   ++Y+++ +  KL+  P +L+
Sbjct: 790 ESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLN 824



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KLV L+M  CT +E L  DV           +  T ++  C  L   P   +++++L +
Sbjct: 963  QKLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRTFPLISKSIKWLYL 1014

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            + T I E+ + L + + ++ LIL+N  +L  +P +I +L  L  L++  C  L+ LP   
Sbjct: 1015 ENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV 1073

Query: 649  --CNLGLLSARNCTSLEKLP 666
               +LG+L    C+SL   P
Sbjct: 1074 NLSSLGILDLSGCSSLRTFP 1093



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 24/199 (12%)

Query: 501 VSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL 556
           V   +G+ +  +++R L W  CPLK L  N   E LV L+M  + +E+LWD  Q L    
Sbjct: 700 VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 759

Query: 557 CTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGRLSWVKRLILSN 613
             F       +   K L+ +PD     NLE + + K  ++   P S+     +  L +S+
Sbjct: 760 QMF-------LRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISD 812

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLP---------ELPCNLGLLSARNCTSLEK 664
              LE  P  + +L  L +L ++ C  L+  P         + P     +   +C   + 
Sbjct: 813 CKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKN 871

Query: 665 LPAGLSSMSSVLYVNLCNF 683
           LPAGL  +  ++    C F
Sbjct: 872 LPAGLDYLDCLMRCMPCEF 890



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E LV L + C K E+LW+ +Q L S           ++ + + L  +PD  +  NL++L 
Sbjct: 893  EYLVFLNVRCYKHEKLWEGIQSLGSL-------EEMDLSESENLTEIPDLSKATNLKHLY 945

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +    ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 946  LNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPL 1004

Query: 647  L----------------------PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCN 682
            +                         L  L   NC SL  LP+ + ++ ++  LY+  C 
Sbjct: 1005 ISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1064

Query: 683  FLKLDPNELS 692
             L++ P +++
Sbjct: 1065 GLEVLPTDVN 1074


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 258/840 (30%), Positives = 387/840 (46%), Gaps = 203/840 (24%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
            Y+VFLSFRG+DT  +FT HL+  L    I+TF +DD   +G+ I       IE +   ++
Sbjct: 219  YEVFLSFRGQDTSHSFTDHLYAALYQNGIRTFRLDDH--KGEEIESCTFKAIEKARCILV 276

Query: 61   IFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFD 120
            I SE Y                  +HS G     LR+            L +  +    +
Sbjct: 277  ILSEHY------------------AHSRGC----LRE------------LVKFIECKNQN 302

Query: 121  SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIW 180
              ++ P           +   ++ +   K KG  G   + ++ E  + +G  G+ ++ I+
Sbjct: 303  GKLVIP-----------IFYHVEPSDVRKQKGTYGK--AFQDHEWPIFLG--GMYRVGIY 347

Query: 181  GIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNI 240
            G+GGI K TIA   FN I+  F  + F  NVRE  ++ G+  LQK+LL    +D +MR +
Sbjct: 348  GLGGIGKTTIAKVSFNHIASDFMITSFIANVRECSKSKGLLHLQKQLL----RDCSMRRV 403

Query: 241  ESQLN----------RLARKKVRIVFDDVTS----------------GSRVIITTRDKQV 274
            ES  N          RL  KKV +V DDV +                GS +IITTR+K +
Sbjct: 404  ESLSNVDEGITMIKARLCFKKVLLVLDDVDNLSQLEALAGDHNWFGPGSIIIITTREKHL 463

Query: 275  LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
            L +   +  Y  K+L + +A +LF   AF  +H    +  L++  ++Y  G+PL LKVLG
Sbjct: 464  LGH-EMDALYEAKKLGHKEAVELFSWHAFNQNHPKEYYETLSNSVVRYVDGLPLGLKVLG 522

Query: 335  CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV 394
             +LCG++   WES + KL+  P+ EI+ VLK SYD LD +QK +FLD+ACF  GE +D V
Sbjct: 523  RFLCGKTVGEWESELHKLKQEPNQEIQSVLKRSYDELDHTQKQLFLDVACFFNGEDKDFV 582

Query: 395  ISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRL 441
              I DA              K L+ + L  +I MHDLL+ MGR+IVR+ES   PGK +RL
Sbjct: 583  TRILDACNFYAKGGIRVLTDKCLVTI-LDNKIWMHDLLQQMGRDIVRQESPEDPGKWSRL 641

Query: 442  WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG------- 494
             +   I +VL +  GTEAI+G+  +++ + ++IH+ + +F+ M  LR L+ Y        
Sbjct: 642  CYPGVISRVLTRKMGTEAIKGMLFNVS-IPKQIHITTKSFAMMKNLRLLKIYSHLKSTSA 700

Query: 495  -DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR 551
             + N   +S     P  E+R+L W   PL++L  +  AE LV L M  + ++QLW++   
Sbjct: 701  REDNSVKLSKDFEFPSCELRYLYWQGYPLESLPSSFDAEDLVELDMRYSNLKQLWENDML 760

Query: 552  LP----------------------------------SSLCTFKTPI-------TFEIIDC 570
            L                                   SSL    T I          + +C
Sbjct: 761  LEKLNTIRLSCSQHLIEIPDISISAPNLETLILDGCSSLLEVHTSIGKLSKLILLSLKNC 820

Query: 571  KMLERLPD--ELENLEYLTVKG------------------------TTIRELPESLGRLS 604
            K L   P    +E L+ L + G                        T I ELP S G L+
Sbjct: 821  KKLSSFPSIINMEALKILNLSGCSGLKKFPDIQGNMEHLLELYLASTAIEELPLSFGHLT 880

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE------------------ 646
             +  L L    NL+ +P SI  L  L +LF+S C +L+  PE                  
Sbjct: 881  GLVILDLKRCKNLKSLPASICKLESLEYLFLSGCSKLENFPEMMEDMENLKELLLDGTSI 940

Query: 647  --LPCN------LGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELSEIVK 696
              LP +      L LL+ RNC +L  LP G+  ++S+  L V+ C+ L   P  L  + +
Sbjct: 941  EGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLIVSGCSLLNNLPRNLGSLQR 1000



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 31/183 (16%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAIII 61
           DVFLSFRGEDTR  FT HL+  L+ K I+TF D ++L RG+ I+  LL  IE S I +II
Sbjct: 24  DVFLSFRGEDTRHTFTDHLYRALNRKGIRTFRDTEELRRGEEIAPELLKAIEESRICLII 83

Query: 62  FSERYASSRW---------------------FFYRVDP-SHVRKQSHSFGRHFSRLRKRF 99
            SE YA SRW                      FY VDP S      +  G  F   R   
Sbjct: 84  LSENYARSRWCLEELAKIMDCRKQMGKLVFPIFYHVDPYSEELDTGNHKGAFFYDDRNGD 143

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIR--PESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E   K++RW+ AL   A++ G+    +R   E+++IEEI + + K L+       K LV
Sbjct: 144 EEGRRKIERWREALKTVANVMGW---YLRDGSETRVIEEITSTIWKCLNRELLHVEKNLV 200

Query: 155 GVE 157
           G++
Sbjct: 201 GMD 203



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 143/337 (42%), Gaps = 67/337 (19%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
            LPS    F++    ++ DCK++E                     +P  +  L  +K+L L
Sbjct: 1061 LPSGFPIFRSFTNLDLSDCKLIEG-------------------AIPNDICSLISLKKLAL 1101

Query: 612  SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
            S N N   IP  I  L+ L  L I  C+ L  +PELP ++  + A NCT+L    + +S+
Sbjct: 1102 SKN-NFLSIPAGISELTNLKDLLIGQCQSLIEIPELPPSIRDIDAHNCTALLPGSSSVST 1160

Query: 672  MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE--------------------RGIK 711
            +  + ++   N  KL  ++ S+  ++   +    +                       I 
Sbjct: 1161 LQGLQFL-FYNCSKLFEDQSSDDKRNVLQRFPHNDASSSASVSSLTTSPVVMQKLLENIA 1219

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKS 771
             S+ FPG+EIP+W  HQ +GSS  +K   P    YN L+ F+ C+V+         R  S
Sbjct: 1220 FSIVFPGSEIPEWIWHQHVGSS--IKIELPT-DWYNDLLGFSLCSVLEHLPERIICRLNS 1276

Query: 772  GEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFG-GEYFGP-- 825
               D+ G++         K  GH    F GK + V  +HV+LG   C+     E+  P  
Sbjct: 1277 DVFDY-GDL---------KDFGHD---FHGKGNNVGPEHVWLGYQPCSQLRLFEFNDPND 1323

Query: 826  -NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             N  E SF     F          VKKCG+  +YA+D
Sbjct: 1324 WNLIEISFEAAHRFSSSA---SNVVKKCGVCLIYAED 1357


>gi|105923041|gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1309

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 278/929 (29%), Positives = 418/929 (44%), Gaps = 182/929 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
            Y VFLSFRGEDTR NFT HL+  L    I TF DD  IR G++I   L   I+ S I+II
Sbjct: 332  YQVFLSFRGEDTRRNFTDHLYKALVDAGIHTFRDDDEIRRGESIDFELQMAIQQSKISII 391

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS  YASSRW                      FY VDPS V +Q+ SF   F    K F
Sbjct: 392  VFSIDYASSRWCLDELVMIMERKRNDDCIVLPVFYDVDPSQVGRQTGSFAATFVEHEKSF 451

Query: 100  PEKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
             E M+R   W+ AL E ADL+G    V+    E++ ++ I   V K+LD          +
Sbjct: 452  NEDMERVNRWRIALKEVADLAGM---VLGDGYEAQFVQSIVEKVSKKLDQKMFHLPLHFI 508

Query: 155  GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            G +  +  I S L  GS       ++GIGG+ K  IA +VFN+    FEG  F  N R  
Sbjct: 509  GRDPLVNYINSWLQEGSHDAAIAILYGIGGVGKTIIAKSVFNQNIHKFEGKSFLSNFRSK 568

Query: 215  EETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
            +    I  LQ++LLS++ K      +     I    + L  +K  IV DDV         
Sbjct: 569  D----IVCLQRQLLSDILKKTIDEINDEDEGILKIKDALCCRKTLIVLDDVDKRDQFNKI 624

Query: 262  ---------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFG-GDHLDA 310
                     GS++I+TTR+K +   N     +++++ L    + +LF   AFG  D +D 
Sbjct: 625  IGMQNWLCKGSKIIVTTRNKGLFSANDIERVEFKVEPLDNEKSLELFSWNAFGQADPVDG 684

Query: 311  SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              +E + + + +  G+PLAL+V+G  L G+ +E+WESA++++E+I + E+++VL+ISYD 
Sbjct: 685  -FVEDSWRIVHHCNGLPLALRVIGSLLSGKGREIWESALQQMEVILNFEVQKVLRISYDF 743

Query: 371  LD-DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            LD D  KN+FLDIACF  G   D+ + I D               + L+ ++   R+ MH
Sbjct: 744  LDGDYPKNLFLDIACFFNGMDVDDAVRILDGLDKGARFGIDNLIDRCLVEINNDQRLWMH 803

Query: 417  DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV------ 470
             L+RDMGREI R+ES     K  R+W H+D + VLK  T  E + G++LDM+ +      
Sbjct: 804  QLVRDMGREIARQEST----KCQRIWRHEDAFTVLKGTTDVEKLRGLTLDMHALMEDNFA 859

Query: 471  ------------NREIH-------------------------MNSYAFSKMPKLRFL--- 490
                         R ++                         +++ AF KMP +RFL   
Sbjct: 860  EVVCTDSMVRRKRRRLNFFQLWLSDFSDGGKLQTGQTSLFPILSTDAFRKMPDVRFLQLN 919

Query: 491  --RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
              +FYG          E +P   +  L W    L+++  ++C EKLV L +  + +   W
Sbjct: 920  YTKFYG--------SFEHIP-KNLIWLCWHGFSLRSIPNHVCLEKLVVLDLSKSCLVDAW 970

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKM---LERLPD--ELENLEYLTVKGTT-IRELPESL 600
                 LP            +I+D +    L R PD   L  LE L ++    + ++ ES+
Sbjct: 971  KGKPFLPK----------LKILDLRHSLNLIRTPDFLGLPALEKLILEDCIRLVQIHESI 1020

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
            G L  +  L L N ++L  +PE +  L+ L  L +  C  L     L   L L   RN  
Sbjct: 1021 GDLQRLLFLNLRNCTSLVELPEEMGRLNSLEELVVDGCSNLDG---LNMELELHQGRNLL 1077

Query: 661  SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS--LYEERGIKKSMYFPG 718
              + + A +  +  + Y                  KDG  K    +Y+E  + +     G
Sbjct: 1078 QSDGIVANIVLVVQIAY------------------KDGKFKVVVFVYDEDEMLRGFCAEG 1119

Query: 719  NEIPKWFRHQSMGSSATLK--TRPP-RPAGYNKLISFAFCAVVVFPAFLKY-FRHKSGED 774
             E  KW        + + K  + P  R  G+N   SF+  +   F   L    R+ +   
Sbjct: 1120 EE-DKWLIQNEFVDNFSFKISSSPAHRICGFNLFTSFSVMSGYSFSEKLGIEIRNNTSGQ 1178

Query: 775  DWDGNVYAVCCDWKRKSEG--HLYSWFLG 801
             W    + +   ++ +  G   L  W LG
Sbjct: 1179 SWRRQAHVLDIRFRDEVRGIQSLSHWKLG 1207


>gi|357499385|ref|XP_003619981.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494996|gb|AES76199.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1151

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 233/731 (31%), Positives = 357/731 (48%), Gaps = 127/731 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG DTR +FT +L+  LS K I TFIDD+              IE S IAII+
Sbjct: 121 YDVFISFRGTDTRFSFTGNLYKALSDKGIDTFIDDK-------------DIEDSRIAIIV 167

Query: 62  FSERYASSRWF---------------------FYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS ++                     FY  +PSHVRK + S+G   ++  ++F 
Sbjct: 168 FSKEYASSSFYLDELVHIIHFSNEKGSTIIPVFYGTEPSHVRKLNGSYGEALAKHEEQFQ 227

Query: 101 ------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGL 153
                 E++ +WK AL +AA+LSG   N+    E   IE+I  DV  +++         L
Sbjct: 228 NSKENMERLLKWKKALNQAANLSGHHFNLGNEYERDFIEKIVTDVSNKINHVPLHVADYL 287

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  I ++ SL  +GS +GVC + I G GG+ K T++ AV+N I   FE   F  NVR
Sbjct: 288 VGLKSRISKVNSLSELGSNDGVCMIGILGTGGMGKTTLSQAVYNSIVHQFEFKCFLHNVR 347

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDK 272
           E     GI  +++                    RL +KKV ++ DDV    +V +   + 
Sbjct: 348 ENSVKHGIPIIKR--------------------RLYQKKVLLIVDDVDKIKQVQVLIGEA 387

Query: 273 QVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALK 331
             L ++ +   K +  EL+   A        F     D+S+  + ++A+KYA G+PLAL+
Sbjct: 388 SWLGRDTYGLNKEQALELLRTKA--------FKSKKNDSSYDYILNRAVKYASGLPLALE 439

Query: 332 VLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHR 391
           V+G  L G+S    ES + K + IPH +I+++LK+SYD+L + Q++VFLDIAC  +G  +
Sbjct: 440 VVGSNLFGKSIAECESLLDKYDRIPHEDIQKILKVSYDALAEEQQSVFLDIACVFKGRGK 499

Query: 392 DEVISIFD--------------ASKSLINLDLFY--RIRMHDLLRDMGREIVRKESINHP 435
           + V  +                  KSLI ++  Y  R+ +HDL+ DMG EIVR+ESI  P
Sbjct: 500 EYVQEVLHDHYGYCIKSHIGVLVDKSLIKINGKYIGRVTLHDLIEDMGMEIVRQESIKEP 559

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD 495
           GKR+RLW   DI  VL++  GT  IE I L+   + + + MN  AF KM  L+ L     
Sbjct: 560 GKRSRLWCRDDIVHVLQEKKGTSKIEMIYLNSPSM-KPVDMNEKAFKKMTNLKTLII--- 615

Query: 496 KNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK-LVSLKMPCTKVEQLWDDVQRLPS 554
             K   S       + +   +W  CP KTL+  + K    +K       Q    +  +P 
Sbjct: 616 -EKGNFSKGPKYLPSSLVFCKWIGCPSKTLSFLSNKNFEDMKHLILDRSQ---SLIHIP- 670

Query: 555 SLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           ++ + +  I F   +C+ L ++ +   +L  LE+L+ KG                     
Sbjct: 671 NVSSLQNLIKFSFENCRNLIKIDNSIWKLNKLEHLSAKGCL------------------- 711

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGL 669
                LE  P    HL  L  L +S C+ L++ PEL C +  +   N   TS+ + P   
Sbjct: 712 ----KLESFPP--LHLPSLKELELSKCDSLKSFPELLCQMTNIKEINLCDTSIGEFPFSF 765

Query: 670 SSMSSVLYVNL 680
             +S ++++ +
Sbjct: 766 QYLSELVFLQV 776


>gi|356517237|ref|XP_003527295.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1098

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 238/760 (31%), Positives = 363/760 (47%), Gaps = 127/760 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR++FT  L   L  + I+ F DD+ IR G++I+  L+  IE S + ++
Sbjct: 20  YDVFVSFRGEDTRNSFTGFLFEALKKQGIEAFKDDKDIRKGESIAPELIRAIEGSHVFLV 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           +FS+ YASS W                      FY VDPS VRKQS  + + FS+ ++  
Sbjct: 80  VFSKDYASSTWCLRELAHIWNCIRTSSRLLLPIFYDVDPSQVRKQSGDYEKAFSQHQQSS 139

Query: 98  RFPEK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS-KNKGLVG 155
           RF EK +K W+  L    +LSG+D    + +  +IEEI   +   L   F +     LVG
Sbjct: 140 RFQEKEIKTWREVLNHVGNLSGWDIRN-KQQHAVIEEIVQQIKTILGCKFSTLPYDNLVG 198

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E     +  L+C+G    V  + I G+GGI K T+  +++ +IS  F    +  +V + 
Sbjct: 199 MESHFATLSKLICLGPVNDVPVVGITGMGGIGKSTLGRSLYERISHRFNSCCYIDDVSKL 258

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIES---------QLNRLARKKVRIVFDDVTS---- 261
               G   +QK+LLS+     N RN+E             RL   K  IV D+V      
Sbjct: 259 YRLEGTLGVQKQLLSQ---SLNERNLEICNVCDGTLLAWKRLPNAKALIVLDNVDQDKQL 315

Query: 262 -----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG 304
                            GS VII +RD+Q+LK    +  Y+++ L   DA +LFC+ AF 
Sbjct: 316 DMFTGGRNDLLRKCLGKGSIVIIISRDQQILKAHGVDVIYQVEPLNDNDALQLFCKKAFK 375

Query: 305 GDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
            +++ +   +LT   + + QG PLA++V+G YL  +    W SA+  L       I  VL
Sbjct: 376 NNYIMSDFEKLTSDVLSHCQGHPLAIEVIGSYLFDKDFSHWRSALVSLRENKSKSIMNVL 435

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFY 411
           +IS+D L+D+ K +FLDIACF   +  + V  + D               KSLI +D   
Sbjct: 436 RISFDQLEDTHKEIFLDIACFFNDDDVEYVKEVLDFRGFNPEYDLQVLVDKSLITMD--E 493

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL-DMNKV 470
            I MHDLL D+G+ IVR++S   P K +RLW  KD ++V+  N   E +E I + D   +
Sbjct: 494 EIGMHDLLCDLGKYIVREKSPRKPWKWSRLWDIKDFHKVMSDNKVAENVEVIIIEDPYDI 553

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKTL-- 525
            R   M   A S M  L+ L + G  N     +  G       E+ +L W + P + L  
Sbjct: 554 LRTRTMRVDALSTMSSLKLL-YLGYWNVGFEINFSGTLAKLSNELGYLSWEKYPFECLPP 612

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL----------------------------- 556
           +   +KLV L++P + ++QLW+  + LP++L                             
Sbjct: 613 SFEPDKLVELRLPYSNIKQLWEGTKPLPNNLRHLNLSGSKNLIKMPYIGDALYLESLDLE 672

Query: 557 -CTFKTPITFEII-----------DCKMLERLPDELEN--LEYLTVKGT-TIRELPESLG 601
            C     I   ++           +CK L +LP   E+  L+ L ++G   +R +  S+G
Sbjct: 673 GCIQLEEIGLSVVLSRKLTSLNLRNCKSLIKLPRFGEDLILKNLDLEGCKKLRHIDPSIG 732

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            L  ++ L L N  NL  +P SI  L+ L +L +S C +L
Sbjct: 733 LLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKL 772



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 15/167 (8%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           E+P+++G +S ++RL LS N N   +P +++ LSKL  L + HC++L++LPELP  +G +
Sbjct: 838 EIPDAIGIMSCLERLDLSGN-NFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSRIGFV 895

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
           +     +L  +P       + LY+  C   +L   E    +   WM      +   K   
Sbjct: 896 TK----ALYYVPR-----KAGLYIFNCP--ELVDRERCTDMGFSWMMQLCQYQVKYKIES 944

Query: 715 YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP 761
             PG+EI +W  ++  G+  +L   P      +  I  AFCA+ V P
Sbjct: 945 VSPGSEIRRWLNNEHEGNCVSLDASPVMHD--HNWIGVAFCAIFVVP 989


>gi|227438223|gb|ACP30601.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 250/772 (32%), Positives = 382/772 (49%), Gaps = 95/772 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF G D R  F SHL      K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 16  LYDVFPSFSGVDVRVTFLSHLLKEFDKKLITAFKDNEIERSRSLDPELKQAIKDSRIAVV 75

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK- 102
           IFS+ YASS W                  FYR+DPSHVRKQ+  FG+ F    K   E+ 
Sbjct: 76  IFSQNYASSSWCLNELLEIVKCGQMVIPVFYRLDPSHVRKQTGDFGKIFEETCKNQTEEV 135

Query: 103 -MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
            + +W+ ALT+ A+  G+ S     E+ +IEEIANDVL +L  T    ++  VG+E  + 
Sbjct: 136 IIIQWRRALTDVANTLGYHSVNWGNEAAMIEEIANDVLDKLLLTSSKDSENFVGIEDHVA 195

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIK 221
           ++  LL + +E V  + +WG  GI K TIA  +F ++S+HF GS F      ++     K
Sbjct: 196 KLSVLLQLDAEEVRMVGLWGSSGIGKTTIARVLFQRLSQHFRGSIFIDRAFVSKTMEIFK 255

Query: 222 D-----------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT-------- 260
           +           LQ+  LSE+   G+++  ++ +   RL  +KV I  DD          
Sbjct: 256 EANPDDYNMKLHLQRNFLSEILGKGDIKINHLSAVGERLKNQKVLIFIDDFDDQVVLEAL 315

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+++ T DKQ L+    N  Y +       A ++ C+ AF         
Sbjct: 316 VGQTQWFGSGSRIVVVTNDKQYLRAHGINHIYEVYLPTEELAVEMLCRSAFRKKAAPEGF 375

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL- 371
            EL  K    A  +PL L VLG  L GR KE W   + +L+     +IE+ L++SYD L 
Sbjct: 376 EELVAKVTGLAGSLPLGLNVLGSSLRGRDKEYWMDLLPRLQNGLDGKIEKTLRVSYDGLT 435

Query: 372 DDSQKNVFLDIACFLEGEH--------RDEVISIFD-----ASKSLINLDLFYRIRMHDL 418
            +  K +F  IAC  + E          D  +S+       A KSLI++   Y ++MH L
Sbjct: 436 SEEDKALFRHIACLFQWEKVTYLKLLLADSGLSVTVGLENLADKSLIHVREDY-VKMHRL 494

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L +MGR IVR E    P KR  L   +DI  VL ++TGT  I GI L++++++ E++++ 
Sbjct: 495 LEEMGRGIVRLE---EPEKREFLVDAQDICDVLSQDTGTHKILGIKLNIDEID-ELNVHE 550

Query: 479 YAFSKMPKLRFLRFYGDK-----NKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NI 527
            AF  M  LRFL  +  K     N+ +  HL    + +P  +++ L+W   P++ L    
Sbjct: 551 NAFKGMRNLRFLEIHSKKRYEIGNEEVTIHLPENFDYLP-PKLKILDWFGYPMRCLPSKF 609

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEY 585
             EKLV LKM  +K+E+LW+ +     SL   K     ++     L  +PD  +  NLE 
Sbjct: 610 RPEKLVKLKMVNSKLEKLWEGI----VSLTCLK---EMDMWGSTNLIEMPDLSKATNLET 662

Query: 586 LTV-KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           L + K  ++ +LP S+   + +K+L L N  N+E IP  I  L  L  L    C R++T 
Sbjct: 663 LKLRKCYSLVKLPSSIPHPNKLKKLDLRNCRNVETIPTGI-SLKSLKDLNTKGCSRMRTF 721

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
           P++   +  +   + T +E++ + L    S+ + NL  F    P +L E V+
Sbjct: 722 PQISSTIEDVDI-DATFIEEIRSNL----SLCFENLHTFTMHSPKKLWERVQ 768



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 35/196 (17%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ELP S   L  + RL + N  NLE +P  I +L  L+ + +S C RL+T P++  N+  L
Sbjct: 806 ELPSSFKNLHNLSRLKIRNCVNLETLPTGI-NLGSLSRVDLSGCSRLRTFPQISTNIQEL 864

Query: 655 SARNCTSLEKLPAGLSSMSSV--LYVNLCN---FLKLDPNELSEIVKDGWMKH------- 702
                T +E++P  +   S +  L +  CN   ++ L+ ++   +    W  H       
Sbjct: 865 DLSE-TGIEEVPCWIEKFSRLNSLQMKGCNNLEYVNLNISDCKSLTGASWNNHPRESALS 923

Query: 703 ---------------SLYEERGIKKSMYF------PGNEIPKWFRHQSMGSSATLKTRPP 741
                          +L +E   +K  YF       G E+P +F H++ G+S++L     
Sbjct: 924 YYHSFDIGIDFTKCLNLVQEALFQKKTYFGCQLKLSGEEVPSYFTHRTTGTSSSLTIPLL 983

Query: 742 RPAGYNKLISFAFCAV 757
             +     + F  C V
Sbjct: 984 HSSLTQPFLRFRACIV 999


>gi|224144414|ref|XP_002325282.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862157|gb|EEE99663.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 520

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 195/516 (37%), Positives = 277/516 (53%), Gaps = 64/516 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I TF DD +L RG+ IS  LL  IE S I+I+
Sbjct: 1   YDVFLSFRGEDTRKNFTDHLYTALGNAGIHTFRDDNELPRGEEISPQLLKAIEGSRISIV 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASSRW                      FY  +PS VRKQ+ S+ + F    +RF
Sbjct: 61  VFSKHYASSRWCLDELVKIIECRQKIGQVVLPIFYDTEPSDVRKQTGSYAKAFDEHEERF 120

Query: 100 PEKMKR---WKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E+M++   W+ AL EA +LSG+   +     E++ I+ I +DV  +L        K  V
Sbjct: 121 KEEMEKVNKWRGALAEAGNLSGWGLHNEANGYEAEFIKRIVSDVACKLGNKTLHVAKHPV 180

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G+   ++ I SLL      V  + I GI GI K TIA AVFNK+   FEGS F  +V+E 
Sbjct: 181 GIYSRVQGIISLLKGAKPDVGIVGIHGIAGIGKTTIAKAVFNKLYFGFEGSSFLSDVKEI 240

Query: 214 AEETGGIKDLQKKLLSELSKDG--NMRNIESQLN----RLARKKVRIVFDDVT------- 260
           +++  G+ +LQ++LL ++ K     + N+   +N    RL RKK+ +VFDDV        
Sbjct: 241 SDKPNGLVELQERLLHDILKPRVWKVSNVYEGMNLIKERLHRKKILVVFDDVDKREQLEA 300

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    +GS +I+ T++K +L     +  Y  KEL    + +LF   AF   H    
Sbjct: 301 LMGERCWFGAGSIIIVVTKNKHLLTEVGVDGMYHAKELDRDQSLELFSLHAFRETHPAKD 360

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + EL+ K + Y +G+PLAL++LG +L  R K  WE  +     IPH +I+  L++S+D+L
Sbjct: 361 YEELSGKVVDYCKGLPLALQILGSHLSIRDKAGWEIDIAHWRNIPHDDIQGKLRVSFDAL 420

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
           +     +FLDIAC+  G  ++ V  I  A               +SLI +D +  + MHD
Sbjct: 421 NVDTSEIFLDIACYFVGGDKEYVADIVGARYDCHPEVAFRTLIGRSLITIDTWNSLWMHD 480

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
            LR MGREI+R+ S NHPG  +R+   KD Y VL K
Sbjct: 481 TLRKMGREIIRQRSRNHPGNCSRIVLPKDAYNVLSK 516


>gi|15235928|ref|NP_193425.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302805|emb|CAB46046.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268443|emb|CAB80963.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658423|gb|AEE83823.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1304

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 257/812 (31%), Positives = 383/812 (47%), Gaps = 125/812 (15%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           D+F SF GED R NF SHL   L+ +SI TF+D  + R   I+ +L+  I  + I+I+IF
Sbjct: 10  DIFPSFSGEDVRKNFLSHLLKQLNRRSINTFMDHVIERSCIIADALISAIREARISIVIF 69

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S+ YA+S W                      FY VDPSHVRKQ   FG+ F +  +  P 
Sbjct: 70  SKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPSHVRKQIGEFGKVFKKTCEDKPA 129

Query: 102 KMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVECS 159
             K RW  ALT+ ++++G D      ++ ++E+IANDV  +L      K  G LVG+E  
Sbjct: 130 DQKQRWVKALTDISNIAGEDLRNGPNDAHMVEKIANDVSNKL--FHPPKGFGDLVGIEDH 187

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFE-GSYFALNVREAEET 217
           IE I+S+LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         + 
Sbjct: 188 IEAIKSILCLESKEAKIMVGIWGQSGIGKSTIGRALFSQLSSQFPLRAFVTYKSTSGSDV 247

Query: 218 GGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
            G+K   QK+LLSE+   KD  + +      RL  KKV I+ DDV               
Sbjct: 248 SGMKLSWQKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEW 307

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+ T+D+Q+LK    +  Y +K      A ++  Q+AFG D        L  +
Sbjct: 308 FGSGSRIIVITQDRQLLKAHEIDLVYEVKLPSQGLALQMISQYAFGKDSPPDDFKALAFE 367

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             + A  +PL L VLG  L GR K+ W   M +L      +IEE L++ YD L+   + +
Sbjct: 368 VAELAGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVCYDRLNKKNREL 427

Query: 379 FLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           F  IACF  G           D+V       KSLI +     I MH+LL  +GREI R +
Sbjct: 428 FKCIACFFNGFKVSNVKELLEDDVGLTMLVEKSLIRITPDGDIEMHNLLEKLGREIDRAK 487

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK--VNREIHMNSYAFSKMPKLR 488
           S  +PGKR  L + +DI +VL + TGTE + GI L        R   ++   F  M  L+
Sbjct: 488 SKGNPGKRQFLTNFEDIQEVLAEKTGTEILLGIRLPHPGYLTTRSFLIDEKLFKGMRNLQ 547

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
           +L      +  +   L  +P  ++R LEW  CPLK+L     AE LV L M  +K+E+LW
Sbjct: 548 YLEIGYWSDGDLPQSLVYLPL-KLRLLEWVYCPLKSLPSTFRAEYLVKLIMKNSKLEKLW 606

Query: 547 DDVQRLPS-------------SLCTFKTPITFE---IIDCKMLERLPDELE--------- 581
           +    L S              +      I  E   + +C+ L  LP  ++         
Sbjct: 607 EGTLPLGSLKKMNLWYSKYFKEIPDLSLAINLEELNLSECESLVTLPSSIQNAIKLRTLY 666

Query: 582 ----------------NLEYLTV-----KGTT-IRELPESLGRLSW----VKRL------ 609
                           NLEYL+V     +GT  I   P  L  L W    +KRL      
Sbjct: 667 CSGVLLIDLKSLEGMCNLEYLSVDCSRMEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKV 726

Query: 610 -----ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLLSARNCTSL 662
                +   NS+LE++ +  + L +L  +F+   + L+ +P+  L  NL  +    C SL
Sbjct: 727 EYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESL 786

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKLD--PNELS 692
              P+ + +   ++Y+++ +  KL+  P +L+
Sbjct: 787 VTFPSSMQNAIKLIYLDISDCKKLESFPTDLN 818



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KLV L+M  CT +E L  DV           +  T ++  C  L   P   +++++L +
Sbjct: 957  QKLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRTFPLISKSIKWLYL 1008

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            + T I E+ + L + + ++ LIL+N  +L  +P +I +L  L  L++  C  L+ LP   
Sbjct: 1009 ENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV 1067

Query: 649  --CNLGLLSARNCTSLEKLP 666
               +LG+L    C+SL   P
Sbjct: 1068 NLSSLGILDLSGCSSLRTFP 1087



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E LV L + C K E+LW+ +Q L S           ++ + + L  +PD  +  NL++L 
Sbjct: 887  EYLVFLNVRCYKHEKLWEGIQSLGSLE-------EMDLSESENLTEIPDLSKATNLKHLY 939

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +    ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 940  LNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPL 998

Query: 647  L----------------------PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCN 682
            +                         L  L   NC SL  LP+ + ++ ++  LY+  C 
Sbjct: 999  ISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1058

Query: 683  FLKLDPNELS 692
             L++ P +++
Sbjct: 1059 GLEVLPTDVN 1068


>gi|297848244|ref|XP_002892003.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337845|gb|EFH68262.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 255/839 (30%), Positives = 394/839 (46%), Gaps = 136/839 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G+D R  F SH       K+I  F+D+++ RG+ I   L   I+ S IA+++
Sbjct: 24  YDVFPSFHGKDVRKTFLSHQLKEFGRKAINFFVDNEIKRGEFIGPELKRAIKGSKIAVVL 83

Query: 62  FSERYASSRW-------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RFPE 101
            S+ YASS W                    FY VDP+ V+KQ   FG+ F +  K +  E
Sbjct: 84  LSKNYASSSWCLDELVEIMKKESGQTVITIFYEVDPTDVKKQKGDFGKVFKKTCKGKGKE 143

Query: 102 KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSI 160
           K++ WK AL   A ++G+ S+    ES +IE IA ++  +L+    S++   L+G+   +
Sbjct: 144 KVQTWKKALEGVATIAGYHSSNWVDESTMIENIAAEISNKLNHLTPSRDFDHLIGMGAHM 203

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA------ 214
           +++E  L +  + V  + IWG  GI K TIA  +FN++S +F+ S F +N++ +      
Sbjct: 204 KKMEQYLRLDLDEVRMIGIWGPPGIGKTTIARFMFNQLSNNFQNSAFMVNIKGSYPRPCL 263

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS----------- 261
           +E      LQK++L E+   KD  + ++     RL  +KV +V DDV             
Sbjct: 264 DEYTAQFQLQKEMLCEMFNQKDIMISHLGVVQGRLGDRKVILVLDDVDRLAQLNALAKNV 323

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG----DHLDASH 312
                GSR+IITT D ++LK    +  Y++      ++ ++FC +AF      D  D   
Sbjct: 324 HWFGRGSRIIITTEDLRLLKAHGIDHIYKVNFPSNDESLQMFCMYAFDQKSPKDGFDGLA 383

Query: 313 IELTDKAIKYAQG-VPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            E+T     Y  G +PL LKV+G Y  G SKE W   + +L    + EIE +LK SYD+L
Sbjct: 384 REIT-----YLVGELPLGLKVMGSYFRGLSKERWSMEVSRLRTNLNGEIESILKFSYDAL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDL----FYR-- 412
            D  K++FL IACF  GE    V                    KSLI+++     + R  
Sbjct: 439 CDEDKDLFLHIACFFNGEKMRRVKEFLAEKFKDLSQRLDVLVEKSLISIEYNQYDYQRKH 498

Query: 413 ---IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG-TEAIEGISLDMN 468
              + MH LL  +GR+I     +  P +R  L    DI  +L   T  T +  GI     
Sbjct: 499 DSYVTMHKLLGQLGRKIASNSDL-EPRQRQFLI-ETDISALLPGYTAITRSFIGI----- 551

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDK-NKCMVSHLEGVPF--AEVRHLEWPQCPLKTL 525
           +    +++    F  M  L+FLR   D  ++ ++S    + F    +R L W  CP+  L
Sbjct: 552 ESKYGLNITGEIFEGMSNLQFLRISNDHGHRNIISSQRCLTFISPNLRLLYWSFCPMTCL 611

Query: 526 NIC--AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELE 581
           +     E LV LKM C+ +E+LWD  + L       +     ++   + L+ LP+     
Sbjct: 612 SFTNDLEFLVELKMFCSTLEKLWDGTKLL-------RNLKRIDLSSSRYLKELPNLSMAT 664

Query: 582 NLEYLTVKG-TTIRELPESLGR----------------------LSWVKRLILSNNSNLE 618
           NL  L V+G +++ ELP S+G                       + +   L LS  S+L 
Sbjct: 665 NLTSLDVRGCSSLVELPSSIGNATNLEGLFLNGCSSLVELHCCPIPFAGSLDLSGCSSLV 724

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
            +P S  HL+ L  L +  C RL +LP+LP +L +L A NC SLEK+     +    L +
Sbjct: 725 ELP-SFSHLTNLQKLSLKGCSRLVSLPKLPDSLMVLDAENCESLEKIDCSFCNPG--LRL 781

Query: 679 NLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
           N  N  KL+      I+           +R   +    PG E+P  F +++ GSS  +K
Sbjct: 782 NFNNCFKLNKEARDLII-----------QRSTLEFAALPGKEVPACFTYRAYGSSIAVK 829


>gi|399920218|gb|AFP55565.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1024

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 242/723 (33%), Positives = 369/723 (51%), Gaps = 92/723 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L+  L  + I+TF DD QL RG  IS  LL  IE S     
Sbjct: 19  YDVFLSFRGEDTRKGFTDYLYKELQRQGIRTFRDDPQLERGTAISPELLTAIEQS----- 73

Query: 61  IFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR---WKNALTEAADLS 117
                                     SF   F    ++F E  K    W++ALT+ A L+
Sbjct: 74  --------------------------SFAEAFQEHEEKFGEANKEVEGWRDALTKVASLA 107

Query: 118 GFDSNVIRPESKLIEEIANDVLKRL--DATFQSKNKGLVGVECSIEEIESLLCIGSEGVC 175
           G+ S   R E++LI EI   + K++    T    +  LVG++  +EEI+ LL   +  V 
Sbjct: 108 GWTSKDYRYETELIREIVQALCKKVHPSLTVCGSSGKLVGMDAKMEEIDVLLDKEANDVR 167

Query: 176 KLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDG 235
            + IWG+GGI K ++A  V+ KIS  F+   F  +VR+A    G+  LQK++LS+L  + 
Sbjct: 168 FIGIWGMGGIGKTSLATLVYEKISHEFDVCIFLDDVRKASADHGLVYLQKQILSQLLTEE 227

Query: 236 NMR--NIESQLNRLAR----KKVRIVFDDVTSG----------------SRVIITTRDKQ 273
           N+   N+   +  + R    K V  V D+V                   SR+IITTR++ 
Sbjct: 228 NVLVWNVNGGITMIKRCVCNKAVLPVLDNVDQSEQLENLVGDKDWFGLRSRIIITTRNRH 287

Query: 274 VLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVL 333
           VL      + Y ++ L  A+A +LF   AFG    D  +  L+ + + +  G+PLALK L
Sbjct: 288 VLVTHGIEEPYEVRGLNKAEALQLFSLKAFGKYEPDEDYAMLSHRFVNHVGGLPLALKTL 347

Query: 334 GCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACF---LEGEH 390
           G +LC R  + W S   KL+  P+ ++ +VLK+SYD LD+ QK  FLDIACF    E + 
Sbjct: 348 GSFLCKRRLDAWNSEWAKLKNTPNEKVFDVLKVSYDGLDEMQKKTFLDIACFSSQCEAKF 407

Query: 391 RDEVISIFD----------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNR 440
             E++  +D            +SL+ +     I MHDL+R+MG EIVR++S   PG R+R
Sbjct: 408 IIELLYSYDVCTGIAIEVLVERSLLTISSNNEIGMHDLIREMGCEIVRQQSPEEPGGRSR 467

Query: 441 LWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCM 500
           LW   DI+ V  KNTGTE  EGI L + ++ +E   N  AFSKM  L+ L  +   N  +
Sbjct: 468 LWLRNDIFHVFTKNTGTEVTEGIFLHLYEL-QEADWNPKAFSKMCNLKLLYIH---NLRL 523

Query: 501 VSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
               + +P A +R L+W   P K+L  +   ++L  L +  + ++ LW+ ++    SL  
Sbjct: 524 SLGPKFLPDA-LRILKWSGYPSKSLPPDFQPDELTELSLVHSNIDHLWNGIK----SLVN 578

Query: 559 FKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNS 615
            K   + ++   + L R P+   + NLE L ++G T + E+  S+  L  +K     N  
Sbjct: 579 LK---SIDLSYSRNLRRTPNFTGIPNLEKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCK 635

Query: 616 NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMS 673
           +++ +P  + ++  L    +S C +L+ +PE    +  LS    N T++EKLP+ +  +S
Sbjct: 636 SIKSLPSEV-NMEFLETFDVSGCSKLKIIPEFVGQMKRLSKLYLNGTAVEKLPSSIEHLS 694

Query: 674 SVL 676
             L
Sbjct: 695 ESL 697



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 16/178 (8%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++P  +G LS ++RL L  N N   +P SI  LSKL ++ + +C+RLQ LPEL   +G+L
Sbjct: 763 DIPNDIGSLSSLRRLELRGN-NFVSLPASIHLLSKLRYINVENCKRLQQLPELSA-IGVL 820

Query: 655 S-ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKS 713
           S   NCTSL+  P GL         N  N L +  N+ +  +    +K  +  +   ++ 
Sbjct: 821 SRTDNCTSLQLFPTGLRQ-------NCVNCLSMVGNQDASYLLYSVLKRWIEIQETHRRP 873

Query: 714 MYF-----PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK-LISFAFCAVVVFPAFLK 765
           + F     PG+EIP+WF +QS+G   T K        Y K ++S   C +++   F K
Sbjct: 874 LEFLWFVIPGSEIPEWFNNQSVGDRVTEKLLSNCVGVYVKQIVSDHLCLLILLSPFRK 931


>gi|351727669|ref|NP_001235633.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452586|gb|ACM89620.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 711

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 180/462 (38%), Positives = 272/462 (58%), Gaps = 44/462 (9%)

Query: 73  FYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM---KRWKNALTEAADLSGFD-SNVIRPES 128
           F+ VDPS VR+Q   +G   ++  ++  E M   + W++AL +AA+LSGF        ES
Sbjct: 16  FFNVDPSDVRQQHGEYGDALAKHEEKLKENMFKVQSWRSALKKAANLSGFHYPGNFDDES 75

Query: 129 KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
            L+++I  D+ ++L  +  S++ GLVG + +I +I+SLL   S  V  + IWG+GGI K 
Sbjct: 76  DLVDKIVEDISEKLSKSSPSESNGLVGNDQNIVQIQSLLLKESNEVIFVGIWGMGGIGKT 135

Query: 189 TIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL--------SKDGNMRNI 240
           TIA A+++K S  +EG  F LNVRE  E  G+  LQ+KL+SEL        S     R  
Sbjct: 136 TIAHAMYDKYSPQYEGCCF-LNVREEVEQRGLSHLQEKLISELLEGEGLHTSGTSKARFF 194

Query: 241 ESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKY 284
           +S   ++ RKKV +V DDV +                GSRV+IT+RDK+VL +    + +
Sbjct: 195 DSAGRKMGRKKVLVVLDDVNTSEQLKYLVGKPICFGPGSRVLITSRDKRVLTSGGVYQIH 254

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
           ++KE+   D+ KLFC  AF   H    + +L+++ +K AQG PLALKVLG     RS + 
Sbjct: 255 KVKEMDPRDSLKLFCLNAFNESHPKMGYEKLSEEVVKIAQGNPLALKVLGADFHSRSMDT 314

Query: 345 WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA---- 400
           WE A+ K++  P+ EI+ VL+ SYD L + +K  FLDIA F E + +D V    DA    
Sbjct: 315 WECALSKIKKYPNEEIQSVLRFSYDGLHEVEKKAFLDIAFFFEEDDKDYVTRKLDAWGFH 374

Query: 401 ---------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
                     K+LI +    RI+MHDL+R+MG EIVR+ESI  P +R+RL  ++++  VL
Sbjct: 375 GASGVEVLQQKALITIS-DNRIQMHDLIREMGCEIVRQESIICPRRRSRLRDNEEVSNVL 433

Query: 452 KKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY 493
           ++N GT+ +E + +D++ + + + +    F KMP+LRFL+FY
Sbjct: 434 RQNLGTDEVEAMQIDVSGI-KNLPLKLGTFKKMPRLRFLKFY 474


>gi|357499531|ref|XP_003620054.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495069|gb|AES76272.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1101

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 263/846 (31%), Positives = 396/846 (46%), Gaps = 163/846 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVF+SFRG DTR  FT +L+  LS K I TFIDD +L  GD I+ SL  +IE S IAII
Sbjct: 18  FDVFISFRGTDTRFGFTGNLYKALSDKGIHTFIDDKELPTGDEITPSLRKSIEESRIAII 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+S +                      FY  +PSHVRK   S+G   ++    F
Sbjct: 78  IFSKNYATSSFCLDELVHIIHCFREKVTKVIPVFYGTEPSHVRKLEDSYGEALAKHEVEF 137

Query: 100 P------EKMKRWKNALTEAAD-LSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                  E++ +WK AL +    +  F S + + E K IEEI  DV  +++       + 
Sbjct: 138 QNDMENMERLLKWKEALHQFHSWVPLFISILNKYEYKFIEEIVTDVSNKINRCHLHVAEY 197

Query: 153 LVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG+E  I E+ SLL +G ++GV  + I G GG+ K T+A AV+N I   FE   F  NV
Sbjct: 198 LVGLESRISEVNSLLDLGCTDGVYIIGILGTGGLGKTTLAEAVYNSIVNQFECRCFLYNV 257

Query: 212 REAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
           RE      +K LQ++LLS     +   + +   IE    RL RKKV ++ DDV       
Sbjct: 258 RENSFKHSLKYLQEQLLSKSIGYDTPLEHDNEGIEIIKQRLCRKKVLLILDDVDKPNQLE 317

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRD+ +L      K Y    L   ++ +L  +  F  D   +
Sbjct: 318 KLVGEPGWFGQGSRVIITTRDRYLLSCHGITKIYEADSLNKEESLELLRKMTFKND---S 374

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+  + ++A++YA G+PLALKV+G  L G+S    ES + K E IP  +I+++LK+S+D+
Sbjct: 375 SYDYILNRAVEYASGLPLALKVVGSNLFGKSIADCESTLDKYERIPPEDIQKILKVSFDT 434

Query: 371 LDDSQKNVFLDIACFLEG------EHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGR 424
           L++ Q++VFLDIAC  +G      +     I I        +    Y + +HDL+  MG 
Sbjct: 435 LEEEQQSVFLDIACCFKGCDWQKFQRHFNFIMISAPDPYYTS----YIVTLHDLIEYMGI 490

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN------- 477
           EIVR+ESI  PG+R RLW H DI  VLK+NTGT  IE I L+ + +   I++N       
Sbjct: 491 EIVRQESIKEPGERTRLWRHDDIAHVLKQNTGTSKIEMIYLNCSSM-EPININEKAFKKM 549

Query: 478 -------------------------------------SYAFS---KMPKLRFLRFYGDKN 497
                                                S+ FS   K+  LR L F     
Sbjct: 550 KKLKTLIIEKGYFSKGLKYLPKSLIVLKWKGFTSEPLSFCFSFKKKLMNLRILTFDCSDY 609

Query: 498 KCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAEKLVSLKM----PCTKVEQLWDDVQRL 552
              +  + G+P  E+  L +  C  L T++     L  L++     C K++         
Sbjct: 610 LTHIPDVSGLP--ELIRLSFQNCKNLTTIHNSVGYLYKLEILDATMCRKLKSF------P 661

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRL 609
           P  L + K     E+  C+ L+  P+   ++ N++ + +  T+I E+P S   L+ +++L
Sbjct: 662 PLCLPSLKK---LELHFCRSLKSFPELLCKMSNIKEIWLCDTSIEEMPFSFKNLNELQKL 718

Query: 610 ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGL 669
           ++ +  N + +P+ +     L  L++ +CE L+ +  +P NL  L A  C SL      +
Sbjct: 719 VIMD-KNFKILPKCLSECHYLEHLYLDYCESLEEIRGIPPNLTNLYAEGCKSLSSSSRRM 777

Query: 670 SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNE-IPKWFRHQ 728
                +                               + G    +   G E IP WF HQ
Sbjct: 778 LLSQRL------------------------------HDAGCNNIVLPTGTEGIPDWFEHQ 807

Query: 729 SMGSSA 734
             G ++
Sbjct: 808 VRGHNS 813


>gi|357468563|ref|XP_003604566.1| Disease resistance protein [Medicago truncatula]
 gi|355505621|gb|AES86763.1| Disease resistance protein [Medicago truncatula]
          Length = 1161

 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 207/619 (33%), Positives = 335/619 (54%), Gaps = 59/619 (9%)

Query: 127 ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLL-CIGSEGVCKLRIWGIGGI 185
           E ++I++I  +V   LD T        VGVE  ++++  LL    S  V  L +WG+GGI
Sbjct: 252 ECEVIKDIVENVTNLLDKTDLFIADNPVGVESRVQDMIQLLDTQQSNDVLLLGMWGMGGI 311

Query: 186 SKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGN--MRNIES 242
            K TIA A++NKI R+FEG  F  N+RE  E+  G   LQ++L+ ++ K+    ++NIES
Sbjct: 312 GKTTIAKAIYNKIGRNFEGRSFLANIREVWEQVSGQVYLQEQLMYDIFKETTTKIQNIES 371

Query: 243 QLN----RLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANK 282
             +    RL  K+V +V DDV                  GSR+IITTRDK +L+    +K
Sbjct: 372 GKSILKERLCHKRVLLVLDDVNKLDQLNALCGSCKWFAPGSRIIITTRDKHILRGDRVDK 431

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y MKE+  +++ +LF   AF        + E++   +KY+ G+PLAL+VLG YL  R  
Sbjct: 432 IYIMKEMDESESLELFSWHAFKQTSPRDDYSEISRNVVKYSGGLPLALEVLGSYLFDREV 491

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-- 400
             W   + KL+ IP+ ++ + LKISYD L+D++K++FLDIACFL G  R++VI I +   
Sbjct: 492 SEWICVLEKLKRIPNDQVHKKLKISYDGLNDTEKSIFLDIACFLIGMDRNDVILILNGCG 551

Query: 401 -----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ 449
                       +SL+ +D   ++ MHDLLRDMGREI+R++S   P +R+RLW+H+D+  
Sbjct: 552 LFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPMEPEERSRLWYHEDVID 611

Query: 450 VLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF 509
           +L ++TGT+A+EG++L +   + +   ++ AF KM KLR L+  G +      +L     
Sbjct: 612 ILSEHTGTKAVEGLTLKLPGRSAQ-RFSTEAFKKMKKLRLLQLSGAQLDGDFKYLS---- 666

Query: 510 AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEI 567
            ++R L W   PL  +  N     +VS+++  + V+ +W ++QR+       +      +
Sbjct: 667 KQLRWLHWNGFPLTCIPSNFYQRNIVSIELENSNVKLVWKEMQRM-------EQLKILNL 719

Query: 568 IDCKMLERLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESI 624
                L + PD   L NLE L +K    + E+  ++G L  V  + L + ++L  +P +I
Sbjct: 720 SHSHYLTQTPDFSYLPNLEKLVLKDCPRLSEVSHTIGHLKKVLLINLKDCTSLSNLPRNI 779

Query: 625 RHLSKLTFLFISHC---ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC 681
             L  L  L +S C   ++L+   E   +L  L A N T++ K+P  +    S+ +++LC
Sbjct: 780 YSLKSLKTLILSGCLMIDKLEEELEQMESLTTLIANN-TAITKVPFSVVRSKSIGFISLC 838

Query: 682 NFLKLDPNELSEIVKDGWM 700
            +     +    I+   WM
Sbjct: 839 GYEGFSRDVFPSII-SSWM 856



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 31/146 (21%)

Query: 2   YDVFLSFRGEDTR--DNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTI--EASCI 57
           Y+VFLSFRG+DT+   +FTSH     S K     +  +  R        + T   E S I
Sbjct: 41  YEVFLSFRGDDTQCIIHFTSHF---FSSKCRNYRLQRRSFRSKRFVHLNVTTARKEGSRI 97

Query: 58  AIIIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR 96
           +II+FS+ YA S W                      FY V PS VR+QS  FG+ F  L 
Sbjct: 98  SIIVFSKNYADSPWCMQELIQILECYRTTGQVVLPVFYDVYPSDVRRQSREFGQSFQHLS 157

Query: 97  KRFPEKMK---RWKNALTEAADLSGF 119
               E      +W +AL + A ++GF
Sbjct: 158 NNNVEGHGASLKWIDALHDVAGIAGF 183


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 254/856 (29%), Positives = 410/856 (47%), Gaps = 130/856 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R    SH+      K I  FID+ + R  +I   L   I+ S IAI++
Sbjct: 85  HQVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVL 144

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 145 LSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKT 204

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G+ S+  R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 205 KEYVERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSFKPSRDFNGLVGMRA 264

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N++      
Sbjct: 265 HMDMLEQLLRLVLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRP 324

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 325 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 384

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         E
Sbjct: 385 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDE 444

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL LKVLG  L G+SK  WE  + +L+     +I  +++ SYD+L D 
Sbjct: 445 IAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFSYDALCDE 504

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFYRIRMHDLLRDM 422
            K +FL IAC    E   +V  +              A KSLI+++    I MH LL   
Sbjct: 505 DKYLFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISIE-DGNIYMHTLLEQF 563

Query: 423 GREIVRKESINHPGKRNRLW-HHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSYA 480
           GRE  RK+ I+H   +++L    +DI +VL  +T  +    GI+LD+ K   E++++  A
Sbjct: 564 GRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYKNVEELNISEKA 623

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTLNIC------AEKL 532
             ++   +F+R  G KN  +   L+G+ +   ++R L W +C     NIC      +E L
Sbjct: 624 LERIHDFQFVRING-KNHALHERLQGLIYQSPQIRSLHW-KC---YQNICLPSTFNSEFL 678

Query: 533 VSLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERL 576
           V L M  +K+++LW+  ++L +                +L T       ++ +C  L  L
Sbjct: 679 VELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVEL 738

Query: 577 PDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           P  +E L  L +    + +++ ELP S G  + ++ L L N S+L ++P SI + + L  
Sbjct: 739 PSSIEKLTSLQILDLHRCSSLVELP-SFGNATKLEILNLENCSSLVKLPPSI-NANNLQE 796

Query: 633 LFISHCERLQTLP--------------------ELPCNLGL------LSARNCTSLEKLP 666
           L +++C R+  LP                    ELP ++G       L  R C+SL KLP
Sbjct: 797 LSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLP 856

Query: 667 AGLSSMSS--VLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
           + +  M++  V Y++ C+ L   P+ +  +      K +L   RG  K    P N   K 
Sbjct: 857 SSIGDMTNLEVFYLSNCSNLVELPSSIGNL-----RKLTLLLMRGCSKLETLPTNINLKS 911

Query: 725 FRHQSMGSSATLKTRP 740
               ++   + LK+ P
Sbjct: 912 LHTLNLIDCSRLKSFP 927



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 54/246 (21%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            C+K+E L  ++          K+  T  +IDC  L+  P+   +++YL + GT I+E+P 
Sbjct: 897  CSKLETLPTNIN--------LKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPL 948

Query: 599  SLGRLSW-----------------------VKRLILSNNSNLERIPESIRHLSKLTFLFI 635
            S+  +SW                       +  L LS +  ++ +P  ++ +S+L  L +
Sbjct: 949  SI--MSWSPLAHFQISYFESLKEFPHALDIITELQLSKD--IQEVPPWVKRMSRLRALRL 1004

Query: 636  SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
            ++C  L +LP+LP +L  L A NC SLE+L    ++    LY   C        +L++  
Sbjct: 1005 NNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEIRLYFPKC-------FKLNQEA 1057

Query: 696  KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTR-PPRPAGYNKLISFA 753
            +D  M  S       +     PG ++P  F H++  G S  +K +  P P      ++F 
Sbjct: 1058 RDLIMHTS------TRNFAMLPGTQVPACFNHRATSGDSLKIKLKESPLPTT----LTFK 1107

Query: 754  FCAVVV 759
             C ++V
Sbjct: 1108 ACIMLV 1113


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1541

 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 253/873 (28%), Positives = 416/873 (47%), Gaps = 170/873 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
            YDVFLSFRGEDTR+ F   L+  L  K ++ F+D D + RGD I  SL   +E S  ++I
Sbjct: 176  YDVFLSFRGEDTREIFAGPLYKALKEK-VRVFLDNDGMERGDEIGSSLQAGMEDSAASVI 234

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S  YA+SRW                      FY+VDPSHVRKQS      F R  +RF
Sbjct: 235  VLSRNYANSRWCLNELAMLCKLKSSLDRRMLPIFYKVDPSHVRKQSDHIEADFKRHEERF 294

Query: 100  -PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              EK++ W++A+    +L+G+       E ++IE +   VL  L  T +   + +VG+E 
Sbjct: 295  DKEKVQEWRDAMKLVGNLAGYVCVEGSNEDEMIELVVKRVLDELSNTPEKVGEYIVGLES 354

Query: 159  SIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEE 216
             ++++  L  I  S GV  L ++G+GGI K T++ A +NK+  +F+   F  ++RE +  
Sbjct: 355  PMKDLMKLFDIESSSGVKVLGLYGMGGIGKTTLSKAFYNKVVGNFKQRAFISDIRERSSA 414

Query: 217  TGGIKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
              G+  LQK L+ EL +     +   R +E     +  KK+ +V DDV            
Sbjct: 415  ENGLVTLQKTLIKELFRLVPEIEDVSRGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGE 474

Query: 261  -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                  G+ ++ITTRD ++L     N++Y +K L    + KLF   +   +    + ++L
Sbjct: 475  TRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQSLKLFSYHSLRKEKPPKNLLKL 534

Query: 316  TDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
            + + ++ +  +PLA++V G  L  + +E  W++ + KL+      +++VL +S++SLDD 
Sbjct: 535  STEIVRISGLLPLAVEVFGSLLYDKKEEKDWQTQLGKLKKTQPHNLQDVLALSFESLDDE 594

Query: 375  QKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            +K VFLDIAC FL+ E  + EV+ I                 KSL+ +     + MHD +
Sbjct: 595  EKKVFLDIACLFLKMEIKKVEVVIILKGCGLNAEAALSVLRQKSLVKILADDTLWMHDQI 654

Query: 420  RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD------------- 466
            RDMGR++V KES  +PG R+RLW   +I  VL    GT +I GI LD             
Sbjct: 655  RDMGRQMVLKESGENPGMRSRLWDRGEIMTVLNNVKGTSSIRGIVLDFKKKFVRDPTADE 714

Query: 467  ---MNKVNR--------------------------EIHMNSYAFSKMPKLRFLRFYGDKN 497
               MN  N                           EI +   +F  M +LR L+     N
Sbjct: 715  IASMNLTNNLGINSVFSYLKSKFVRFPAEEKTKSSEITIPVESFVPMTELRLLQI---NN 771

Query: 498  KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP----------------- 538
              +  +L+ +P +E++ ++W  CPL+ L  +  A +L  L +                  
Sbjct: 772  VELEGNLKLLP-SELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRRVQTLRSNRVDE 830

Query: 539  ---------CTKVEQLWD----------------DVQRLPSSLCTFKTPITFEIIDC-KM 572
                     C  +E + D                 + ++P S+   +  +  +   C K+
Sbjct: 831  NLKVLILRGCHSLEAIPDLSNHEALEMLVFEQCTLLVKVPKSVGNLRKLLHLDFSRCSKL 890

Query: 573  LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
             E L D   L+ LE L + G + +  LPE++G ++ +K L+L + + ++ +PESI  L  
Sbjct: 891  SEFLADVSGLKRLEKLFLSGCSDLSVLPENIGAMTSLKELLL-DGTAIKYLPESINRLQN 949

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSA-----RNCTSLEKLPAGLSSMSSV--LYVNLCN 682
            L  L +S C   + +PELP  +G L +      N T+L+ LP+ +  +  +  L++  C 
Sbjct: 950  LEILSLSGC---RYIPELPLCIGTLKSLEKLYLNDTALKNLPSSIGDLKKLQDLHLVRCT 1006

Query: 683  FLKLDPNELSEIV--KDGWMKHSLYEERGIKKS 713
             L   P+ ++E++  K  ++  S  EE  +K S
Sbjct: 1007 SLSKIPDSINELISLKKLFITGSAVEELPLKPS 1039



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 23/140 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +D FLSF+ E TR  FT  L+ VL  + ++ + DD     D +  SLL  +E S   +++
Sbjct: 16  WDAFLSFQRE-TRHKFTERLYEVLVKEQVRVWNDDVERGNDELGASLLEAMEDSAALVVV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S  YA S W                      FY V+P   RKQ+  +   F    KRF 
Sbjct: 75  LSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEPCIFRKQNGPYEMDFEEHSKRFS 134

Query: 101 -EKMKRWKNALTEAADLSGF 119
            EK++RW+ A+    ++ GF
Sbjct: 135 EEKIQRWRRAMNIVGNIPGF 154



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 127/300 (42%), Gaps = 38/300 (12%)

Query: 580  LENLEYLTVKGTTIR-ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
            L +LE L  +   I  ++P+ L +LS + +L L NN     +P S+  LS L  L +  C
Sbjct: 1222 LTSLEELDARSWRISGKIPDDLEKLSSLMKLNLGNNY-FHSLPSSLVGLSNLQELSLRDC 1280

Query: 639  ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--V 695
              L+ LP LPC L  L+  NC SLE + + LS ++ +  +NL N  K +D   L  +  +
Sbjct: 1281 RELKRLPPLPCKLEHLNMANCFSLESV-SDLSELTILEDLNLTNCGKVVDIPGLEHLMAL 1339

Query: 696  KDGWM-----KHSLYEERGIKKS-------MYFPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            K  +M      +SL  ++ + K+       +  PGN +P W          T   +P   
Sbjct: 1340 KRLYMTGCNSNYSLAVKKRLSKASLKMLRNLSLPGNRVPDWLSQ----GPVTFSAQP--- 1392

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWD-GNVYAVCCDWKRKSEGHLYSWF-LG 801
               NK +     AVVV         +++ +DD+   +V  V     +       +   L 
Sbjct: 1393 ---NKELRGVIIAVVV------ALNNETEDDDYQLPDVMEVQAQIHKLDHNVCTNTLHLQ 1443

Query: 802  KISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             +    +D + + C  F   +      +  + I      PP  +  E+K  GIH VY  D
Sbjct: 1444 GVPRTSNDQLHI-CR-FSAFHPLVTMLKDGYTIQVIKRNPPIKQGVELKMHGIHLVYEGD 1501



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         E+++C+ L+ LP    +++ L  L ++G+ I ELPE  G+L  
Sbjct: 1078 IEALPKEIGALHFIRKLELMNCEFLKFLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLEN 1137

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L +SN + L+R+PES   L  L  L++        + ELP + G LS      + K 
Sbjct: 1138 LVELRMSNCTMLKRLPESFGDLKSLHHLYMKET----LVSELPESFGNLSKLMVLEMLKN 1193

Query: 666  P 666
            P
Sbjct: 1194 P 1194



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   +      +  C+ +  LP     L++LE L +  T ++ LP S+G L  
Sbjct: 937  IKYLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKLYLNDTALKNLPSSIGDLKK 996

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFI--SHCERLQTLPELPCNLGLLSARNCTSLE 663
            ++ L L   ++L +IP+SI  L  L  LFI  S  E L   P    +L   SA  C  L+
Sbjct: 997  LQDLHLVRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSSLPSLTDFSAGGCKFLK 1056

Query: 664  KLPAGL 669
            ++P+ +
Sbjct: 1057 QVPSSI 1062



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKGTTIRELPESLGRLSW 605
            V+ LP    +  +   F    CK L+++P  +    +L  L +  T I  LP+ +G L +
Sbjct: 1031 VEELPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHF 1090

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSL 662
            +++L L N   L+ +P+SI  +  L  L +     ++ LPE      NL  L   NCT L
Sbjct: 1091 IRKLELMNCEFLKFLPKSIGDMDTLCSLNL-EGSNIEELPEEFGKLENLVELRMSNCTML 1149

Query: 663  EKLPAGLSSMSSV 675
            ++LP     + S+
Sbjct: 1150 KRLPESFGDLKSL 1162


>gi|255562174|ref|XP_002522095.1| hypothetical protein RCOM_1382630 [Ricinus communis]
 gi|223538694|gb|EEF40295.1| hypothetical protein RCOM_1382630 [Ricinus communis]
          Length = 515

 Score =  292 bits (747), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 200/551 (36%), Positives = 284/551 (51%), Gaps = 117/551 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG D RD F SHL+  L    +  F+D+ L RG++I+ SLL  IE S ++++I
Sbjct: 6   YDVFISFRGADIRDGFLSHLYKSLCRNQVHAFVDENLDRGEDITSSLLEIIEQSYVSVVI 65

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA S W                      FYRVDP HV++ +  FG   ++ R+ F 
Sbjct: 66  FSENYAFSPWCLDELVKILECKTTMAQIVLPVFYRVDPIHVQQLTGCFGDAIAKHREEFK 125

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
             +++   W  AL E   ++G  S                                    
Sbjct: 126 NSLRKVETWCQALKETTGMAGLVS------------------------------------ 149

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
              + I+ +  +G        IWG+GGI K T+A  VF+++S  F    F  +VRE  E 
Sbjct: 150 ---QNIKYVRVVG--------IWGMGGIGKTTVAVKVFDQVSGQFTSRCFFGDVRENLEK 198

Query: 218 GGIKDLQKKLL-----SELSKDGNMRNIESQLNR-LARKKVRIVFDDVTS---------- 261
                LQ++LL      E+S  G    + S + + L+R+KV IV DDV+           
Sbjct: 199 FTPDCLQRELLFQVLGKEISNAGMPIMLSSSIRKMLSRRKVLIVLDDVSDLKQIELLIGK 258

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                  SR+I+T+RDKQ+L+N  A + Y ++EL  ++A  LFC  AF  D     ++ L
Sbjct: 259 HTSYGPRSRIIMTSRDKQLLQNAGA-EIYEVEELNGSEALLLFCLHAFKQDSPKKGYMAL 317

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +++AIKYAQGVPLALKVLG  L  R  E WE  + KL+     EI +VL+ISYD L +++
Sbjct: 318 SERAIKYAQGVPLALKVLGSNLYSRDVEEWEDELEKLKGASDEEIRKVLRISYDELCENE 377

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-----------SKSLINLDLFYRIRMHDLLRDMGR 424
           K +FLDIACFL+G  +D   SI D             KSLI++     + MHDLL  M +
Sbjct: 378 KEIFLDIACFLKGVDKDRAESILDVHGSRIGIRRLLDKSLISIS-NNELDMHDLLEQMAK 436

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           +I+ +E     GKR+RLW   DI+       GTEAI+GISLDM+    ++ ++  AF +M
Sbjct: 437 DIICQE--KQLGKRSRLWQATDIH------NGTEAIKGISLDMSS---DLELSPTAFQRM 485

Query: 485 PKLRFLRFYGD 495
             LRFL+FY D
Sbjct: 486 DNLRFLKFYND 496


>gi|357452851|ref|XP_003596702.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485750|gb|AES66953.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 747

 Score =  292 bits (747), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 201/612 (32%), Positives = 310/612 (50%), Gaps = 91/612 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR  F  HLH  L+ K I  F DD+ L +G+++S  LL  I++S I+I+
Sbjct: 68  YDVFISFRGADTRSTFVDHLHAHLTTKGIFAFKDDKRLEKGESLSPQLLQAIQSSRISIV 127

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S                        FY  DPSHVRKQS  +   F  L+ +F
Sbjct: 128 VFSKNYAESTLCLEEMATIAEYHTELKQTVFPIFYDADPSHVRKQSGVYQNAFVLLQNKF 187

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              P K+ RW  A+   A L G+D    +PE + I+ I  +V+  +   F      L+G+
Sbjct: 188 KHDPNKVMRWVGAMESLAKLVGWDVRN-KPEFREIKNIVQEVINTMGHKFLGFADDLIGI 246

Query: 157 ECSIEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +  +EE+ESLL + S+      + IWG+ GI K T+A  +++++S  F+ S F  NV + 
Sbjct: 247 QPRVEELESLLKLDSKDYEFRAIGIWGMAGIRKTTLASVLYDRVSYQFDASCFIENVSKI 306

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIE-SQLN-----RLARKKVRIVFDD---------- 258
            + GG   +QK++L +   + N+     S+++     RL  KK  +V D+          
Sbjct: 307 YKDGGATAVQKQILRQTIDEKNLETYSPSEISGIIRKRLCNKKFLVVLDNADLLEQMEEL 366

Query: 259 ------VTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                 +  GSR+IITTRD                     DA KLF + AF  +   +  
Sbjct: 367 AINPELLGKGSRIIITTRD-------------------INDARKLFYRKAFKSEDPTSGC 407

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++LT + +KYAQG+PLA++V+G +LC R    W  A+ +L   P   + +VL++S++ L 
Sbjct: 408 VKLTPEVLKYAQGLPLAVRVVGSFLCTRDANQWRDALYRLRNNPDNNVMDVLQVSFEGLH 467

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYRIR-----MHDLL 419
              + +FL IACF +GE  D V  I DA         +SLI    F  IR     MH++L
Sbjct: 468 SEDREIFLHIACFFKGEKEDYVKRILDACGLHPHIGIQSLIERS-FITIRNNEILMHEML 526

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK-VNREIHMNS 478
           +++G++IVR++    PG  +RLW + D Y V+   TGT  I  I LD  + ++    + +
Sbjct: 527 QELGKKIVRQQFPFQPGSWSRLWLYDDFYSVMMTETGTNNINAIILDQKEHISEYPQLRA 586

Query: 479 YAFSKMPKLRFLRFYGDKN-KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK--LVSL 535
            A S M  L+ L     KN    ++ L       +++L W   P  +L +  E   LV L
Sbjct: 587 EALSIMRGLKILILLFHKNFSGSLTFLSN----SLQYLLWYGYPFASLPLNFEPFCLVEL 642

Query: 536 KMPCTKVEQLWD 547
            MP + +++LWD
Sbjct: 643 NMPYSSIQRLWD 654


>gi|296089437|emb|CBI39256.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  291 bits (746), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 221/654 (33%), Positives = 345/654 (52%), Gaps = 95/654 (14%)

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           +++W+ ALT+AA++SG+     + ES++I +I   +L++L  T     K +VG++  +E+
Sbjct: 2   VEKWRTALTKAANISGWHVEN-QYESEVIGQIIEKILQKLGPTHLYVGKNIVGMDYHLEQ 60

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGIK 221
           +++L+ I    VC + I+GIGGI K TIA A++N+IS  FEGS F  +VRE +++  G+ 
Sbjct: 61  LKALINIELNDVCIIGIYGIGGIGKTTIAKAIYNEISCKFEGSSFLADVREQSKDNAGLL 120

Query: 222 DLQKKLLSELSKDGNMRNIESQL--------NRLARKKVRIVFDDVT------------- 260
            LQ +LL + +  G  +   S +        ++L  K+V ++ DDV              
Sbjct: 121 RLQNQLLDD-TLAGTYKKKSSSIYGATHEIRDKLRLKRVLVILDDVDGRRQLDYLAGECE 179

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
              SGSR+IITTR K ++    ANK Y  ++L   +A KLF  +AF  +    ++  L +
Sbjct: 180 WFGSGSRIIITTRHKDLVAIDGANKSYEPRKLNDEEAIKLFSLYAFKQNVPRENYKNLCE 239

Query: 318 KAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            A+KYAQG+PLAL VLG  L   R    WES +RKLE  P+ EI  VL+ S+D L   + 
Sbjct: 240 NAVKYAQGLPLALAVLGSTLSSKRGIREWESELRKLEKEPNREIYNVLRTSFDGLSRVEG 299

Query: 377 NVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
            +FLDIACF +G+ RD V  I D           + LI + L  +I MHDL++ MG E+V
Sbjct: 300 EIFLDIACFFKGKDRDFVSRILDDAEGEISNLCERCLITI-LDNKIYMHDLIQQMGWEVV 358

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R++  N PG+++RLW   D+  VL +N GT+AIEG+ +DM+   +EI   +  F+KM KL
Sbjct: 359 REKCQNEPGEQSRLWDLDDVSSVLTRNAGTKAIEGLFMDMS-AQQEIQFTTETFTKMNKL 417

Query: 488 RFLRFYGDKNKCMVSHLEG--------------VPFAEVRHLEWPQCPLKTL--NICAEK 531
           R L+ + D     +  ++G              +P  E+R+L W    LK L  N   + 
Sbjct: 418 RLLKIHQDAKYDHIKEIDGDVHFPQVALPEDLKLPSFELRYLHWDGYSLKYLPPNFHPKN 477

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYL 586
           LV L + C+ ++QLW+  + L             ++I+    +RL +      + NLE L
Sbjct: 478 LVELNLRCSNIKQLWEGNKVLKK----------LKVINLNHSQRLMEFPSFSMMPNLEIL 527

Query: 587 TVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPE----------------------- 622
           T++G  +++ LP  + RL  ++ L   + S LE  PE                       
Sbjct: 528 TLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIEKLPS 587

Query: 623 -SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
            SI HL  L +L ++HC+ L  LPE  C+L  L   N  +  KL   + S+ S+
Sbjct: 588 SSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKFLNVNACSKLHRLMESLESL 641



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 33/285 (11%)

Query: 487 LRFLRFYGDKNKC-----MVSHLEGVPFAEVRHLEWPQCPLKTLN-ICAEKLVSLKMPCT 540
           LRFL+F  + N C     ++  LE +   E  +L W  C L TL+ + + +++ L   C 
Sbjct: 617 LRFLKFL-NVNACSKLHRLMESLESLQCLEELYLGWLNCELPTLSGLSSLRVLHLNGSCI 675

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRE-- 595
                     R+  S           + DC+++E   D    L +L+ L +    + +  
Sbjct: 676 --------TPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEG 727

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +P+ + RLS ++ L LS  +N+ ++P SI HLSKL FL++ HC++LQ   +LP ++  L 
Sbjct: 728 IPDDIYRLSSLQALDLSG-TNIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLD 786

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI-VKDGWMKHSLYEERGIKKSM 714
             +  S + L     S    L+  L N  K   +E+ ++  + GW      +     K +
Sbjct: 787 GHD--SFKSL-----SWQRWLWGFLFNCFK---SEIQDVECRGGWHDIQFGQSGFFGKGI 836

Query: 715 YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
                 +P W  +Q++G+   ++  P      N  + FA CAV V
Sbjct: 837 SIVIPRMPHWISYQNVGNEIKIEL-PMDWYEDNDFLGFALCAVYV 880



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 3/138 (2%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LPS +   K+  TF    C  L+  P+  E+++ L    + GT+++ELP S+  L  
Sbjct: 1034 LESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQG 1093

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +K L L N  NL  IP++I +L  L  L +S C +L  LP+   +L  L       L+ +
Sbjct: 1094 LKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSM 1153

Query: 666  PAGLSSMSSVLYVNLCNF 683
               L S S + ++ + N 
Sbjct: 1154 SCQLPSFSDLRFLKILNL 1171



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 8/114 (7%)

Query: 569  DCKMLERLPDELENLEYLTVKGTT----IRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            +CK LE LP ++  L+ LT    +    ++  PE    +  ++ L L   S L+ +P SI
Sbjct: 1030 NCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTS-LKELPSSI 1088

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSLEKLPAGLSSMSSV 675
            +HL  L +L + +C+ L  +P+  CNL  L       C+ L KLP  L S++ +
Sbjct: 1089 QHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQL 1142



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 122/295 (41%), Gaps = 50/295 (16%)

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            +P  +  LS ++ L L  N +   IP  I  LSKL  L +SHCE LQ +PELP +L +L 
Sbjct: 1206 IPSEICYLSSLQALYLKGN-HFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLD 1264

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE------LSEIVKDGWMKHS----LY 705
            A  C  LE L +  S + S L+       K +  E      LS ++  G+  H     + 
Sbjct: 1265 AHGCIRLESLSSPQSLLLSSLF----KCFKSEIQELECRMVLSSLLLQGFFYHGVNIVIS 1320

Query: 706  EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLK 765
            E  GI +  +           HQ  GS  T++  P      N  + FA C+         
Sbjct: 1321 ESSGILEGTW-----------HQ--GSQVTMEL-PWNWYENNNFLGFALCSA-------- 1358

Query: 766  YFRHKSGEDDWDGNVYAV---CCD--WKRKS----EGHLYSWFLGKISYVESDHVFLGCN 816
            Y    +  +D DG+ Y     CC   W  +S    E  L S          SD V++   
Sbjct: 1359 YSSLDNESEDGDGDGYPCTFKCCLTFWASESGWQCELPLKSRCTCYNDGGVSDQVWVMYY 1418

Query: 817  SFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSA---DHILK 868
              G     P   +    +  SFH   +    +VKKC + F+++Q S+    H++K
Sbjct: 1419 PKGAFRMNPVSVKHG-SLSASFHGYIHGRAVKVKKCAVQFLFSQGSSVQDAHVIK 1472



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 581  ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
            E+ E L +  T I EL  ++  LS ++ L L N   LE +P  I  L  LT    S C +
Sbjct: 999  EHEEKLCLGETAINELL-NIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSK 1057

Query: 641  LQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCN 682
            LQ+ PE+  ++ +L     + TSL++LP+ +  +  + Y++L N
Sbjct: 1058 LQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLEN 1101


>gi|255587945|ref|XP_002534449.1| transferrin, putative [Ricinus communis]
 gi|223525271|gb|EEF27935.1| transferrin, putative [Ricinus communis]
          Length = 597

 Score =  291 bits (746), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 172/431 (39%), Positives = 245/431 (56%), Gaps = 103/431 (23%)

Query: 73  FYRVDPSHVRKQSHSFGRHFSRLRKRFP---EKMKRWKNALTEAADLSGFDSNVIRPESK 129
           FY+VDP+ V++ + SF   F + RK F    +K+++W  AL E A+L G+DS VI+PESK
Sbjct: 250 FYQVDPTDVQELTGSFADAFVKHRKEFKHNLDKVEKWSQALMEIANLKGWDSQVIKPESK 309

Query: 130 LIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKIT 189
           LIEEI  D+ K                                   KL +WG+ GI K T
Sbjct: 310 LIEEIVADISK-----------------------------------KLSVWGMAGIGKTT 334

Query: 190 IAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLAR 249
           IAGA+F++IS  FEG +F  +VRE                EL +        ++ N+L++
Sbjct: 335 IAGAIFDRISAEFEGKFFVPDVRE----------------ELKR--------ARWNKLSK 370

Query: 250 KKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYAD 293
           KK+ IV DDVTS                G+R+I+T+RDKQVLKN    K Y +K+L Y++
Sbjct: 371 KKILIVLDDVTSSQQLKSLIGELSLYGLGTRIIVTSRDKQVLKNG-CTKIYEVKKLNYSE 429

Query: 294 AHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE 353
           A  LF   AF  +H     +EL+ +++ YA+G+PLALKVLG  LC +  E WES + KL+
Sbjct: 430 ALYLFRIHAFKQNHPTEGLMELSKRSVNYAKGIPLALKVLGSDLCDQGIEEWESELAKLQ 489

Query: 354 IIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRI 413
             P +EI+ +LKISYD LD+++KN+FLDIACF +GE                       +
Sbjct: 490 GSPKMEIQNILKISYDGLDENEKNIFLDIACFFKGE-----------------------L 526

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MH+LL+ MG+ IV ++ I  PGKR+RLW++KDIY VL K+ G EA+EGIS D+++  R+
Sbjct: 527 GMHNLLQQMGKRIVYQQCIKQPGKRSRLWNYKDIYHVLTKDKGIEAVEGISADLSRT-RD 585

Query: 474 IHMNSYAFSKM 484
           + ++S AF  M
Sbjct: 586 LKLSSTAFESM 596


>gi|357499833|ref|XP_003620205.1| Disease resistance protein [Medicago truncatula]
 gi|355495220|gb|AES76423.1| Disease resistance protein [Medicago truncatula]
          Length = 1318

 Score =  291 bits (746), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 266/811 (32%), Positives = 378/811 (46%), Gaps = 132/811 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YD+FLSFRGEDTR  FT +L   LS + I TF+DD+ L +G+ I+ SL+  IE S +AII
Sbjct: 10  YDLFLSFRGEDTRHGFTGNLWKALSDRGIHTFMDDEELQKGEEITPSLIKAIEDSNMAII 69

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS +                      FY V+PS VRK   S+G        R 
Sbjct: 70  VLSKNYASSTFCLKELSTILYSIKDKGRCVWPVFYDVEPSDVRKLKRSYGEAMVEHEARD 129

Query: 100 PEKM---KRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
              M   ++WKNAL + A+LSGF   N    E   I +I   V + +          LVG
Sbjct: 130 HSNMDLLQKWKNALNQVANLSGFHFKNGDEYEHVFIGKIVEQVSREIIPATLPVPDYLVG 189

Query: 156 VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E   + + SLL  G ++ V  + I GIGGI K T+A AV+N I   F+GS F   VRE 
Sbjct: 190 LEYQKQHVTSLLNDGPNDKVQMVGIHGIGGIGKTTLALAVYNSIVHQFQGSCFLEKVREN 249

Query: 215 EETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS------- 261
            +  G+  LQK LLS++  + N+      + I     R  +KKV ++ DDV         
Sbjct: 250 SDKNGLIHLQKILLSQVVGEKNIELTSVRQGISILQKRFHQKKVLLLLDDVDKEEQLEAI 309

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMK--------ELVYADAHK-------- 296
                    GSRVIITTRDK++L      + Y +         ELV   A K        
Sbjct: 310 AGRSDWFGRGSRVIITTRDKRLLTYHGVERTYEVNGLNDQDAFELVILKAFKNKFSPSYK 369

Query: 297 --LFCQW-------------AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRS 341
             LF Q+             AF  D + + ++ +  +AI YA G+PLAL+V+G +   ++
Sbjct: 370 DALFAQYGSLLDVNKLPRLKAFKTDEVFSGYVHVILRAISYASGLPLALEVIGSHFFNKT 429

Query: 342 KEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA- 400
            E  + A+ + E IP  +I+ +L++S+D+L + +K+VFLDIAC  +G     V  I +A 
Sbjct: 430 IEQCKYALDRYERIPDKKIQTILQLSFDALQEEEKSVFLDIACCFKGYKWTRVEQILNAH 489

Query: 401 -------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDI 447
                         KSLI   +   + +HDL+ DMG+EIVR+ES   PGKR+RLW  KDI
Sbjct: 490 YDNIMKDHIDVLVEKSLIKTSMSGNVTLHDLIEDMGKEIVRQESPEDPGKRSRLWSSKDI 549

Query: 448 YQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGV 507
            QVL++NTGT  IE I         E+  +  AF KM  LR L     +      +L   
Sbjct: 550 IQVLEENTGTSKIEIIC---PSSRIEVEWDEEAFKKMENLRTLIIMDGQFTESPKNLPN- 605

Query: 508 PFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEI 567
               + H  +P   L +      KL   K+P       WDD  +  S    FK       
Sbjct: 606 SLRILEHHLYPSWGLPS-QFYPRKLAICKIPSYSTSFAWDDFFKKASK---FKNIRVLSF 661

Query: 568 IDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLG----------------------R 602
              K L R+PD   L NLE L+ +    +  + +S+G                      +
Sbjct: 662 DHHKSLTRIPDISGLVNLEELSFQDCVNLITVDDSVGFLGNLKTLRAMRCIKLRSIPPLK 721

Query: 603 LSWVKRLILSNNSNLERIPESIRHL-SKLTFLFISHCERLQTLPELP-CNLGLLSARNCT 660
           L+ ++ L LS  S LE  P  +  L  KL  + +  C +L+++P L   +L  L   NC 
Sbjct: 722 LASLEELDLSQCSCLESFPPVVDGLVDKLKTMTVRSCVKLRSIPTLKLTSLEELDLSNCF 781

Query: 661 SLEKLPA---GLSSMSSVLYVNLCNFLKLDP 688
           SLE  P    G      +L V  C  L+  P
Sbjct: 782 SLESFPLVVDGFLGKLKILLVKYCRNLRSIP 812



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 565 FEIIDCKMLERLP----DELENLEYLTVK-GTTIRELPESLGRLSWVKRLILSNNSNLER 619
            ++ +C  LE  P      L  L+ L VK    +R +P    RL  +++L LS+  +LE 
Sbjct: 775 LDLSNCFSLESFPLVVDGFLGKLKILLVKYCRNLRSIPPL--RLDSLEKLDLSHCYSLES 832

Query: 620 IPESIRHL-SKLTFLFISHCERLQTLPELP-CNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
            P  +  L  KL FL + HC +L ++P L   +L   +  +C SLE+ P  L  M+++  
Sbjct: 833 FPTVVDGLLDKLKFLSMEHCVKLTSIPSLRLTSLERFNLSHCLSLERFPKILGEMNNITE 892

Query: 678 VNLCNFL 684
           ++L N L
Sbjct: 893 IHLDNTL 899



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 42/184 (22%)

Query: 577  PDELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
            P +  ++EY+ ++     +  L   L   + VK L LS+N   + +P+SI     L  L 
Sbjct: 949  PMQSSHVEYICLRNCKFSDEYLSTGLMLFTNVKELHLSDN-QFKILPKSIEKCHFLQRLV 1007

Query: 635  ISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            + +CE LQ +  +P  L  LSA NC SL       S   S          KL   EL E 
Sbjct: 1008 LDNCEELQEIEGIPPCLKTLSALNCKSLT------SPCKS----------KLLNQELHE- 1050

Query: 695  VKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTRPPRPAGYNKLISFA 753
              + W +               P   IP+WF HQ + G S +   R       NK    A
Sbjct: 1051 AGNTWFR--------------LPRTRIPEWFDHQCLAGLSISFWFR-------NKFPVIA 1089

Query: 754  FCAV 757
             C V
Sbjct: 1090 LCVV 1093



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 379  FLDIACFLEGEHRDEVISIFDAS-----KSLINLDLFYRIRMHDLLRDMGREIVRKESIN 433
            FLDI C  +G    +V +          K  I + +   + +HDL+  M +E+V +ES  
Sbjct: 1233 FLDIVCCFKGYESIKVQNTLCTHHSYNVKDQIKVPIDESLIIHDLIEKMAKELVHRESPM 1292

Query: 434  HPGKRNRLWHHKDIYQVLKKN 454
              GK  RLW  +D   VL +N
Sbjct: 1293 ESGKCGRLWLLEDTIYVLMEN 1313


>gi|82542041|gb|ABB82028.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 885

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 214/641 (33%), Positives = 334/641 (52%), Gaps = 76/641 (11%)

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM-KRWKNALTEAADLSGFDSNVIRP--ES 128
            FY +DPS VRKQ+ SF   F +  +RF EK+ K W+ AL EA +LSG++ N +    E+
Sbjct: 49  IFYDIDPSDVRKQNGSFAEAFVKHEERFEEKLVKEWRKALEEAGNLSGWNLNDMANGHEA 108

Query: 129 KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
           K I+EI  DVL +LD  +    + LVG++     I   L   +  V  + I G+ GI K 
Sbjct: 109 KFIKEIIKDVLNKLDPKYLDVPELLVGMDRLSRNIFDFLSTATHDVRIVGIHGMPGIGKT 168

Query: 189 TIAGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQKKLLSELSKD--GNMRNIESQL- 244
           TIA  VFN++   FEGS F  N+ E +++  G+  LQ++LL ++ K    N+  ++    
Sbjct: 169 TIAKVVFNQLRYRFEGSCFFSNINETSKQFNGLALLQEQLLHDILKQDVANINCVDRGKV 228

Query: 245 ---NRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYR 285
               RL RK+V +V DDVT                 GSRVIITTRD   L    A++ Y+
Sbjct: 229 LIKERLRRKRVLVVADDVTRQDQLNALMGERGWFGPGSRVIITTRDSSFLHK--ADQTYQ 286

Query: 286 MKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVW 345
           ++EL   ++ +LF   A         +IEL+   + Y  G+PLAL+V+G  L G++++ W
Sbjct: 287 IEELKPDESFQLFSWHALRDTKPAEDYIELSKDVVDYCGGIPLALEVMGACLSGKNRDGW 346

Query: 346 ESAMRKLEIIPHVEIEEVLKISYDSLDDSQ-KNVFLDIACFLEGEHRDEVISIFDA---- 400
           +S + KL  IP+ +I+  L+IS+D+LD  + +N FLDIACF     ++ V  +  A    
Sbjct: 347 KSVIDKLRRIPNRDIQGKLRISFDALDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGY 406

Query: 401 ----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                      +SLI + L   + MHDLLRDMGRE+VR++S   PG+R R+W+ +D + V
Sbjct: 407 NPEVDLQTLHERSLIKV-LGETVTMHDLLRDMGREVVREKSPKQPGERTRIWNQEDAWNV 465

Query: 451 LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEG---V 507
           L++  GT+ +EG++LD+ + +    +++ +F++M  L  L+  G        HL G   +
Sbjct: 466 LEQQKGTDVVEGLALDV-RASEAKSLSAGSFAEMKCLNLLQING-------VHLTGSFKL 517

Query: 508 PFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD--------DVQRLPSSLC 557
              E+  + W QCPLK    +   + L  L M  + +++LW          +  L  S  
Sbjct: 518 LSKELMWICWLQCPLKYFPSDFTLDNLAVLDMQYSNLKELWKGKKILNRLKILNLSHSQH 577

Query: 558 TFKTPITFE-------IIDCKMLERLPDELENLE---YLTVKGT-TIRELPESLGRLSWV 606
             KTP           +  C  L  +   +ENL    +L +KG   ++ LPE +G +  +
Sbjct: 578 LIKTPNLHSSSLEKLILKGCSSLVEVHQSIENLTSLVFLNLKGCWRLKNLPERIGNVKSL 637

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           K L +S  S LE++PE +  +  LT L     E  Q L  +
Sbjct: 638 KTLNISGCSQLEKLPERMGDMESLTKLLADGIENEQFLSSI 678



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
           LS +++L L+ N    R+P  I  L KLT+L +  C+ L ++P+LP +LG L A +C SL
Sbjct: 746 LSALEKLDLTGN-KFSRLPSGIGFLPKLTYLSVEGCKYLVSIPDLPSSLGHLFACDCKSL 804

Query: 663 EKL 665
           +++
Sbjct: 805 KRV 807


>gi|357469487|ref|XP_003605028.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506083|gb|AES87225.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1340

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 241/742 (32%), Positives = 378/742 (50%), Gaps = 101/742 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           +DVFLSFRG  TR +FT HL+  L  + I  F DDQ ++ G  I  SLL  IEAS I+I+
Sbjct: 10  HDVFLSFRG-GTRYSFTDHLYRSLLRQGINVFRDDQNLKIGHEIGPSLLQAIEASRISIV 68

Query: 61  IFSERYASSRW----FFYRVD-PSHVRKQSHSFGRHFSRLRKRF---PEKMKRWKNALTE 112
           +  + YASS W        VD   +  K  +S+     +  KRF    EK+K WK AL  
Sbjct: 69  VLCKEYASSTWCLDELVKIVDCYENNGKSKNSYEDAIRKHEKRFGRESEKVKAWKLALNR 128

Query: 113 AADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCI-GS 171
              LSG        ES+ IE+I  D+  +L  T   + K LVG+    ++++S++ I  S
Sbjct: 129 VCALSGLHCKDDVYESEFIEKIVRDISTKL-PTVPLQIKHLVGLNTRFKQVKSIIDINSS 187

Query: 172 EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EETGGIKDLQKKLLS 229
           E +C L I+G GGI K   A  ++NKI   FE + F  NVRE   E  GG+++LQ+ LL+
Sbjct: 188 ERICMLGIYGAGGIGKTQFALHIYNKIRHQFEAASFLANVREKSNESIGGLENLQRTLLN 247

Query: 230 ELSK-----DGNMRNIESQLNRLARKKVRIVFDDV----------------TSGSRVIIT 268
           E+ +       + R      +RL+ K+V ++ DDV                 SGS +IIT
Sbjct: 248 EIGEATQVFGSSFRGSSEIKHRLSHKRVLLILDDVDSVKQLESLAGGHDWFNSGSIIIIT 307

Query: 269 TRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVP 327
           TRD  +L K+    K Y+++EL + ++ +LFC +AF       +  +++  AI YA+G+P
Sbjct: 308 TRDIDILHKHDVKIKPYKLEELNHHESTELFCWYAFNMSRPVENFEKISSHAISYAKGIP 367

Query: 328 LALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE 387
           LAL+V+G  L G+S E W+  ++K   +P  EI+ V++ISY  L D  + +FLDIACF +
Sbjct: 368 LALRVIGSNLKGKSIEEWDIELQKYRKVPDAEIQGVMEISYKGLSDLDQKIFLDIACFFK 427

Query: 388 GEHRDEVISIFDA-----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPG 436
           GE  D    I DA           SK LI +D    ++MHDL++DMGREIVRKES ++PG
Sbjct: 428 GERWDYAKRILDACDFYPVIRAFNSKCLITVDENGLLQMHDLIQDMGREIVRKESTSNPG 487

Query: 437 KRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK 496
           +R+RLW HKD+  VLK N G+  +EG+ +        + + +  FS  P           
Sbjct: 488 ERSRLWSHKDVLDVLKGNLGSTKVEGMII--------LIVRNTLFSSGP----------- 528

Query: 497 NKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPCTKVEQLWDDVQRLPS 554
                S+L       +R L+W   P K   LN    ++V  K+P + +         L  
Sbjct: 529 -----SYLPN----NLRLLDWKCYPSKDFPLNFYPYRIVDFKLPHSSM--------ILKK 571

Query: 555 SLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPESLGRLSWVKRLIL 611
               F+      +   + + ++PD    +NL   T+ K   +     S+G +  +  L  
Sbjct: 572 PFQIFEDLTLINLSHSQSITQVPDLSGAKNLRVFTLDKCHKLVRFDISIGFMPNMVYLSA 631

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL------PCNLGLLSARNCTSLEKL 665
           S  + L+     I +L  L  L  ++C++ +  P++      P  + ++S    T++++ 
Sbjct: 632 SECTELKSFVPKI-YLPSLQVLSFNYCKKFEYFPQVMQKMDKPLKIHMIS----TAIKEF 686

Query: 666 PAGLSSMSSVLYVNL--CNFLK 685
           P  + +++ + Y+++  C  LK
Sbjct: 687 PKSILNLTGLEYIDMSICKGLK 708


>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1090

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 239/766 (31%), Positives = 375/766 (48%), Gaps = 105/766 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGE  R +F SH+        I  FID+++ RG +I   L+  I  S IAII+
Sbjct: 63  HHVFPSFRGEYVRRDFLSHIQMEFQRMGITPFIDNEIERGQSIGPELIRAIRESKIAIIL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS W                      FY+VDPS V+K +  FG+ F +    + 
Sbjct: 123 LSRNYASSSWCLDELAEIMKCRDELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E + RW+ AL   A ++G+ S     E+ +I++IA D+   L+ +  S +  GLVG+  
Sbjct: 183 KEHVGRWRQALANVATIAGYHSTNWDNEAAMIKKIATDISNLLNNSSSSSDFDGLVGMRE 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E++E LLC+ S+ V  + IWG  GI K TIA  ++NK+S  F+ S F  ++ EA+ T 
Sbjct: 243 HLEKMEPLLCLDSDEVRMIGIWGPSGIGKTTIARVIYNKLSGSFQLSVFMESI-EAKYTR 301

Query: 219 GIKD-------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS-------- 261
              D       LQ++ +S+++   +M+  ++    +RL  KKV +V D V          
Sbjct: 302 PCSDDYSAKLQLQQQFMSQITNQSDMKISHLGVVQDRLKDKKVLVVLDGVDKSMQLDAMV 361

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITT+D+++ ++   N  Y++      +A ++ C +AFG         
Sbjct: 362 KETWWFGPGSRIIITTQDRKLFRSHGINHIYKIDFPSTEEALQILCTYAFG--------- 412

Query: 314 ELTDKAIKYAQGVP-LALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
                     Q  P + LK L   L     E W  A+ +L       I  +LK SYD+LD
Sbjct: 413 ----------QNSPNVVLKNLLRKLHNLLME-WMKALPRLRNSLDANILSILKFSYDALD 461

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLL 419
           D  K +FL IACF   E  ++V                  A KSLI+L+  Y I MHDLL
Sbjct: 462 DEDKYLFLHIACFFNHEEIEKVEDYLAETFLDVSHRLNVLAEKSLISLNRGY-INMHDLL 520

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDM--NKVNREIHM 476
             +GR+IVRK+SI  PG+R  L   ++I +VL  +  G+ ++ GI+ +   +++  ++H+
Sbjct: 521 VKLGRDIVRKQSIREPGQRLFLVDAREICEVLNLDANGSRSLMGINFNFGEDRIKEKLHI 580

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVS 534
           +  AF  M  L+FLR  G+ N   + H       ++R L W   P+  L      E LV 
Sbjct: 581 SERAFQGMSNLQFLRVKGNNNTIHLPHGLEYISRKLRLLHWTYFPMTCLPPIFNTEFLVE 640

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL----EYLTVKG 590
           L M  +K+E+LW+ + +LPSS+         ++     L  LP  + NL    E      
Sbjct: 641 LDMSYSKLEKLWEGI-KLPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKELDLSSL 699

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LP 648
           + + ELP S+G  + ++ L L   S+L ++P SI +L KL  L +  C +L+ LP     
Sbjct: 700 SCLVELPFSIGNATNLEVLNLRQCSSLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANIKL 759

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            +LG L   +C  L++ P   +++          FL+LD   + E+
Sbjct: 760 GSLGELDLTDCLLLKRFPEISTNVE---------FLRLDGTAIEEV 796



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 55/272 (20%)

Query: 565  FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES- 623
             ++ DC +L+R P+   N+E+L + GT I E+P S+   S +  + +S + NL+  P + 
Sbjct: 765  LDLTDCLLLKRFPEISTNVEFLRLDGTAIEEVPSSIKSWSRLNEVDMSYSENLKNFPHAF 824

Query: 624  -------------------IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
                               ++  S+LT L +  C++L +LP++P ++  + A +C SLE+
Sbjct: 825  DIITELHMTNTEIQEFPPWVKKFSRLTVLILKGCKKLVSLPQIPDSITYIYAEDCESLER 884

Query: 665  LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
            L     + +  L    C   KL+      I++     +++            PG E+P +
Sbjct: 885  LDCSFHNPNICLKFAKC--FKLNQEARDLIIQTPTSNYAV-----------LPGREVPAY 931

Query: 725  FRHQS-MGSSATLK-TRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDW-DGNVY 781
            F HQS  G S T+K    P P      + F  C ++V     K       + +W D NVY
Sbjct: 932  FTHQSTTGGSLTIKLNEKPLPTS----MRFKACILLVH----KGDNEARDDKNWMDENVY 983

Query: 782  AVCCDWKRKSEGHLYSWFLGKISYVESDHVFL 813
             V C+   +S  +LY         V ++HV++
Sbjct: 984  IVSCN---ESTHYLYP--------VLAEHVYV 1004


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 241/763 (31%), Positives = 375/763 (49%), Gaps = 150/763 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFTSHL   L  K +  FID++L RG+ IS+SL  +I+ + I+I+I
Sbjct: 47  YDVFLSFRGEDTRTNFTSHLDMALRQKGVNVFIDNKLERGEQISESLFKSIQEASISIVI 106

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY+VDPS +RKQ+ SFG   ++ + +F 
Sbjct: 107 FSQNYASSSWCLDELVNIIECKKSKGQNVFPVFYKVDPSDIRKQTGSFGEALAKHQPKFQ 166

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVGVEC 158
            K + W+ ALT AA+LSG++    R E+ LI ++   VL  L+ T       K  VG++ 
Sbjct: 167 TKTQIWREALTTAANLSGWNLGT-RKEADLIGDLVKKVLSVLNRTCTPLYVAKYPVGIDS 225

Query: 159 SIE----------------------EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFN 196
            +E                      E ES       GV  + ++GIGGI K T+A A++N
Sbjct: 226 KLEYMKLRSHNLFEKSNKFHYRKQHEYES-----DTGVYMVGLYGIGGIGKTTLAKALYN 280

Query: 197 KISRHFEGSYFALNVREA-EETGGIKDLQKKLLSE-LSKDGNMRNIESQL----NRLARK 250
           KI+  FE   F  NVREA ++  G+  LQ+ LL E L+ D  + N++  +    NRL  K
Sbjct: 281 KIASQFEACCFLSNVREASKQFNGLAQLQETLLYEILTVDLKVINLDRGINIIRNRLCLK 340

Query: 251 KVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADA 294
           KV IV DDV                  GSR+I+TTR+K +L +   ++   +  L   +A
Sbjct: 341 KVLIVLDDVDKLEQLEALVGGRDWFGQGSRIIVTTRNKHLLSSHGFDEMENILGLDEDEA 400

Query: 295 HKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
            +LF   AF  +H  +++++L+ +A  Y +G  LAL VLG +LC R +  W S + + E 
Sbjct: 401 IELFSWHAFKKNHPSSNYLDLSKRATSYCKGHSLALVVLGSFLCTRDQVEWCSILDEFEN 460

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIR 414
             + +I+++L++S+D L+D                                         
Sbjct: 461 SLNKDIKDILQLSFDGLEDK---------------------------------------- 480

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
                  MG +IV  ES+   GKR+RLW  +D+++VL  N+GT+A++GI LD     R +
Sbjct: 481 -------MGHKIVCGESL-ELGKRSRLWLVQDVWEVLVNNSGTDAVKGIKLDFPNSTR-L 531

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWP--QCPLKTLNICAEKL 532
            ++  AF KM  LR L     +N    + +E +P   ++ ++W   + P        + L
Sbjct: 532 DVDPQAFRKMKNLRLLIV---QNARFSTKIEYLP-DSLKWIKWHGFRQPTFPSFFTMKNL 587

Query: 533 VSLKMPCTKVEQL---WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE--Y 585
           V L +  + ++      +D +RL     ++ T           LE++P+     NLE  Y
Sbjct: 588 VGLDLQHSFIKTFGKRLEDCERLKYVDLSYST----------FLEKIPNFSAASNLEELY 637

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           LT   T +  + +S+  L  +  L L   SNL+++P     LS L  L +S+C++L+ +P
Sbjct: 638 LT-NCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKLEKIP 696

Query: 646 EL--PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFL 684
           +L    NL  L    CT+L  +   + S+  +  LY+  C  L
Sbjct: 697 DLSSASNLTSLHIYECTNLRVIHESVGSLDKLEGLYLKQCTNL 739


>gi|449443187|ref|XP_004139362.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
           [Cucumis sativus]
          Length = 902

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 261/846 (30%), Positives = 398/846 (47%), Gaps = 144/846 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR NFTSHL+  L  + I  FID +L RG+ I  SLL  IE S I+I++
Sbjct: 17  FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDKKLSRGEEICASLLEAIEGSKISIVV 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE YASS W                      FY+VDPS V KQS  FG  F        
Sbjct: 77  ISESYASSSWCLNELVKIIMCKELRGQVVLPIFYKVDPSEVGKQSGRFGEEFD------- 129

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD-ATFQ-SKNKGLVGVEC 158
                                     E+ LI+ I  +V K+LD AT Q    K  VG++ 
Sbjct: 130 --------------------------EANLIQNIVQEVWKKLDRATMQLDVAKYPVGIDI 163

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EET 217
            +  +  L  + S G+    ++G+GG+ K TIA A++NKI+  FEG  F  N+REA  + 
Sbjct: 164 QVSNL--LPHVMSNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQY 221

Query: 218 GGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS---------- 261
           GG+   QK+LL E+  D ++      R I    NRL  KK+ ++ DDV +          
Sbjct: 222 GGLVQFQKELLCEILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGG 281

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GS+VI TTR+KQ+L     +K   +  L Y +A +LF    F   H    ++EL
Sbjct: 282 HDWFGHGSKVIATTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLEL 341

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL--EIIPHV---EIEEVLKISYDS 370
           + +A+ Y +G+PLAL+VLG +L         S  +++  E   H    +I++ L+ISYD 
Sbjct: 342 SKRAVDYCKGLPLALEVLGSFLHSIGD---PSNFKRILDEYEKHYLDKDIQDSLRISYDG 398

Query: 371 LDDSQKNVFLDIACFLEGEHRDEV-----ISIFDASKSLINLDL-----FYRIRMHDLLR 420
           L+D  K +F  I+C    E   +V     + +      L+NL L     F R+ MH++++
Sbjct: 399 LEDEVKEIFCYISCCFVREDICKVKMMVXLCLEKGITKLMNLSLLTIGRFNRVEMHNIIQ 458

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MGR I   E+ +   KR RL    D   VL  N    A++ I L+  K  + + ++S A
Sbjct: 459 QMGRTIHLSET-SKSHKRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTK-LDIDSRA 516

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
           F K+  L  L   G+      S LE +P + +R + WPQ P  +L      E L+ LK+P
Sbjct: 517 FDKVKNLVVLEV-GNATSSESSTLEYLP-SSLRWMNWPQFPFSSLPTTYTMENLIELKLP 574

Query: 539 CTKVE---QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-T 592
            + ++   Q +   +RL              + D  +L  +PD     NL+YL + G   
Sbjct: 575 YSSIKHFGQGYMSCERLKE----------INLSDSNLLVEIPDLSTAINLKYLNLVGCEN 624

Query: 593 IRELPESLGRLSWVKRLILSNN-SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           + ++ ES+G LS +  L  S++    E+ P  ++ L  L FL + +C   +  P+    +
Sbjct: 625 LVKVHESIGSLSKLVALHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQFSEEM 683

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK-DGWMKHSLYEERGI 710
             +   +      +P G+  MS+   ++L  F    PN L++ +  D  ++   Y + G 
Sbjct: 684 KSIEYLS-IGYSTVPEGVICMSAAGSISLARF----PNNLADFMSCDDSVE---YCKGGE 735

Query: 711 KKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHK 770
            K +      IP W+R++SM  S T       PA Y   +S+ +      P F    + +
Sbjct: 736 LKQLVLMNCHIPDWYRYKSMSDSLTFFL----PADY---LSWKW-----KPLFAPCVKFE 783

Query: 771 SGEDDW 776
              DDW
Sbjct: 784 VTNDDW 789


>gi|297794611|ref|XP_002865190.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311025|gb|EFH41449.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1127

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 244/768 (31%), Positives = 389/768 (50%), Gaps = 118/768 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R+ F SH    L  K I +F D+++ R  ++   L   I  S IA+++
Sbjct: 14  YDVFPSFSGEDVRNTFLSHFLKELDSKLIISFKDNEIERSQSLDPELKHGIRNSRIAVVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
           FS+ YASS W                      FY +DPSHVRKQ+  FG+ F +  R + 
Sbjct: 74  FSKNYASSSWCLNELLEIVKCKKEFGQLVIPIFYHLDPSHVRKQTGDFGKIFEKTCRNKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            ++  RWK ALT+ A++ G+       E+ +I+EIAND+L +++ +  +  + LVG+E  
Sbjct: 134 VDEKIRWKEALTDVANILGYHIVTWDNEASMIKEIANDILGKINLSPSNDFEDLVGIEDH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV-----REA 214
           I  + SLL + SE V  + IWG  GI K TIA A+F+++S  F+ S F   V      E 
Sbjct: 194 ITRMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSQLSCQFQSSVFIDRVFISKSMEV 253

Query: 215 EETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------ 260
                + D      LQ+  L+E    KD  + +I +  N +  +K  IV DD+       
Sbjct: 254 YSGANLVDYNMKLHLQRAFLAEFFDKKDIKIDHIGAMENMVKHRKALIVIDDLDDQDVLD 313

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     SGSR+I+ TR+K  L+    +  Y++     A A ++FC+ AF       
Sbjct: 314 ALAGRTQWFGSGSRIIVVTRNKHFLRANGIDHIYKVCLPSNALALEMFCRSAFRKSSPPD 373

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +EL+ +    A  +PL L VLG  L GR K  W   + +L+ +   +I + L++SYD 
Sbjct: 374 GFMELSSEVALRAGNLPLGLNVLGSNLRGRDKGYWIDMLPRLQGLDG-KIGKTLRVSYDG 432

Query: 371 LDDSQ-KNVFLDIACFLEGEHRDEVISIFDASKSLINLDL------------FYRIRMHD 417
           L++ + + +F  IAC   GE   ++  +   S   +N+ L            F  + MH 
Sbjct: 433 LNNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTVEMHS 492

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL++MG+EIVR +S + PG+R  L   KDI  VL+ N GT+ + GI+LD+++ + E+H++
Sbjct: 493 LLQEMGKEIVRTQS-DEPGEREFLVDLKDICDVLEDNAGTKKVLGITLDIDETD-ELHIH 550

Query: 478 SYAFSKMPKLRFLRFYG---DKNKCMVSHLEG----VPFAEVRHLEWPQCPLKTL--NIC 528
             +F  M  L FL+ Y    D+ K +  HL      +P +++R L + + PLK L  N  
Sbjct: 551 ESSFKGMHNLLFLKIYTKKLDQKKEVRWHLPERFNYLP-SKLRLLRFDRYPLKRLPSNFH 609

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            E LV L+M  +K+E+LW+ V  L                              L  + +
Sbjct: 610 PENLVKLQMQQSKLEKLWEGVHSLAG----------------------------LRNMDL 641

Query: 589 KGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           +G+  ++E+P+ L   + ++ L LS+ S+L  +P SI++L+KL  L IS+C+ L+T+P  
Sbjct: 642 RGSKNLKEIPD-LSMATNLETLKLSSCSSLVELPSSIQYLNKLNDLDISYCDHLETIP-- 698

Query: 648 PCNLGLLSARNCTSLEKLP-AGLSSMSSVLYVNLCNFLKLDPNELSEI 694
                  +  N  SL +L  +G S + S L ++  N   LD ++ +EI
Sbjct: 699 -------TGVNLKSLYRLNLSGCSRLKSFLDIS-TNISWLDIDQTAEI 738



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 29/212 (13%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP+ +   ++ I  ++  C  L   PD   N+  L +  T I E+P  + +LS +  L +
Sbjct: 808 LPTGI-NLESLIALDLSHCSQLRTFPDISTNISDLKLSYTAIEEVPLWIEKLSLLCNLDM 866

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
           +  SNL R+  +I  L  L     S C  L             ++ N +S E        
Sbjct: 867 NGCSNLLRVSPNISKLKHLEGADFSDCVALTE-----------ASWNGSSSEMAKFLPPD 915

Query: 672 MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMG 731
             S + +N  N   LD               +L + +     +   G E+P +F H++ G
Sbjct: 916 YFSTVKLNFINCFNLD-------------LKALIQNQTFSMQLILSGEEVPSYFAHRTTG 962

Query: 732 SSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
           SS +L    P  +      SF  C V+   +F
Sbjct: 963 SSISL----PHISVCQSFFSFRGCTVIDVESF 990


>gi|297848110|ref|XP_002891936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337778|gb|EFH68195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1064

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 235/749 (31%), Positives = 382/749 (51%), Gaps = 85/749 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +++F SF G D R +F SHL    +   I  F D  + R + I+ SL+  I  S I I+I
Sbjct: 14  FNIFSSFHGPDVRKSFLSHLRKQFNYNGITMFDDQGIERSETIAPSLIQAIRESRILIVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S  YASS W                      FY VDP+HVRKQ   FG+ FS    R  
Sbjct: 74  LSTNYASSSWCLNELVEIMECKKVMGQIVMTIFYGVDPTHVRKQIGDFGKAFSETCSRNT 133

Query: 101 E-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           + +M++W  ALT+ +++ G        E+ +IE++A DV ++L+AT       +VG+E  
Sbjct: 134 DVEMRKWSKALTDVSNILGEHLLNWDNEANMIEKVAGDVSRKLNATPSRDFADMVGLEEH 193

Query: 160 IEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
           +++IE LL +   +G   + I G  GI K TIA A+ + +S  F+ S F  N+R +    
Sbjct: 194 LKKIEFLLHLNHDDGAMIVGICGPAGIGKTTIARALHSLLSSSFQLSCFMENLRGSYNSG 253

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
            +E G    LQ++LLS++     MR  ++ +   RL  +KV I+ DDV            
Sbjct: 254 LDEYGLKLCLQQQLLSKILNQNGMRVYHLGAIHERLCDRKVLIILDDVNDLKQLEALADE 313

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT D+++L+    N  Y++       + K+ C++AF          EL
Sbjct: 314 TRWFGPGSRIIVTTEDQELLQQHGINNTYQVGFPSKEISLKILCRYAFRQSFPHHGFKEL 373

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE-IIPHVEIEEVLKISYDSLDDS 374
             +  K    +PL L+V+G  L G+ +E WE  M +LE I+ H +IEEVL++ Y+SL ++
Sbjct: 374 ALRLTKLCGNLPLGLRVVGSSLRGKKEEEWEEVMCRLETILDHRDIEEVLRVGYESLHEN 433

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
           +K++FL IA F   +  D V ++                +KSLI +     I MH LL+ 
Sbjct: 434 EKSLFLHIAVFFNHKDGDIVNAMLAETNLDIKHGLRILVNKSLIYISTKREIVMHKLLQQ 493

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           +GR+++ ++    P KR  L    +I  VL+ +TG  A+ GIS D + +  E+ ++  A 
Sbjct: 494 VGRQVIHRQE---PWKRQILIDAHEICDVLENDTGNRAVSGISFDTSGI-AEVIISDRAL 549

Query: 482 SKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI--CAEKLVS 534
            +M  LRFL     R+ G+    +   +E  P   +R L W   P K+L +  C E LV 
Sbjct: 550 RRMSNLRFLSVYKTRYNGNDRVHIPEEIEFPP--RLRLLHWEAYPKKSLPLRFCLENLVE 607

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
           L M  +++E+LW+  Q     L   K     +    + L+ LPD     NL+ L + G T
Sbjct: 608 LYMRDSQLEKLWEGAQ----PLTNLK---KMDFSSSRKLKELPDLSNATNLKRLQLNGCT 660

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ E+P ++  L  ++ L++++  NLE +P  I +L+ L  +++  C RL+T P++  N+
Sbjct: 661 SLVEIPSTIANLHKLEDLVMNSCVNLEVVPTHI-NLASLERIYMIGCSRLRTFPDMSTNI 719

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
             L     T++EK+PA +   S + YV++
Sbjct: 720 SQLLMSE-TAVEKVPASIRLWSRLSYVDI 747


>gi|23477201|emb|CAD36199.1| NLS-TIR-NBS disease resistance protein [Populus tremula]
          Length = 516

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 200/519 (38%), Positives = 287/519 (55%), Gaps = 76/519 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVF SFRG+DTR  FT HL+  L    I TF  DD+L RG+ IS  LL  I  S I I+
Sbjct: 1   YDVFFSFRGKDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLKAIRESKICIV 60

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS+VRKQ+ SF   F +  +R
Sbjct: 61  VFSKGYASSRWCLDELVEILKCKYRKTGQIALPIFYDIDPSYVRKQTGSFAEAFVKHEER 120

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             EK+K W+ AL EA +LSG+  N+   E+K I+EI  DVL +LD  +    K LVG++ 
Sbjct: 121 SKEKVKEWREALEEAGNLSGW--NLKDHEAKFIQEIIKDVLTKLDPKYLHVPKHLVGIDP 178

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI----SRHFEGSYFALNVREA 214
               I   L   ++ VC + + G+ GI K TIA  VFN++       FEG+ F LNV+E 
Sbjct: 179 LAHNIFHFLSTAADDVCIVGLHGMPGIGKTTIAKVVFNQLCYGFGYGFEGNLFLLNVKEK 238

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQLN----------RLARKKVRIVFDDVT---- 260
            E   +  LQ++LL ++ +    +N E   N          RL RK+V +V DDV     
Sbjct: 239 SEPNDLVLLQQQLLHDILR----QNTEKITNVDRGKVLIKERLCRKRVLVVVDDVDHLDQ 294

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSRVIITTRD+++L    A+++Y+++E+   ++ +LFCQ AF     
Sbjct: 295 LNALMGERSWFGPGSRVIITTRDERLLLE--ADQRYQVQEMDPYESLQLFCQHAFRDAKP 352

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              ++EL++  ++Y  G+PLAL+VLG  L G+++  WES + +L  IP   I+E L+IS+
Sbjct: 353 AKDYVELSNDVVEYCGGLPLALEVLGSCLIGKNQARWESVIDRLRRIPEHAIQERLRISF 412

Query: 369 DSLDDSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRI 413
           DSL     KN FLDI+CF  G  ++ V  + +                +S+I +D    I
Sbjct: 413 DSLKAPNLKNTFLDISCFFIGGQKEYVAEVLEGRYGCNPEDDFGTLIERSVIKVDDSGTI 472

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
            MHDLLR+MGR IV+ ES  +P +R+R+W  +D ++VLK
Sbjct: 473 SMHDLLREMGRGIVKDESPENPAQRSRIWCQEDAWKVLK 511


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 232/666 (34%), Positives = 342/666 (51%), Gaps = 99/666 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I +F DD+ L +G +I+  LL  IE S I II
Sbjct: 19  YDVFLSFRGGDTRKNFTDHLYTTLTAYGIHSFKDDEELEKGGDIASDLLRAIEESRIFII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           IFS+ YA SRW                      FY VDPS VR Q  SFG     H    
Sbjct: 79  IFSKNYAYSRWCLNELVKIIERKSQKESLVLPIFYHVDPSDVRNQKGSFGDALACHERDA 138

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   E +++W+ AL +AA+L G   +  + E+++++EI N +++RL+    S  K +V 
Sbjct: 139 NQEKKEMVQKWRIALRKAANLCGCHVDD-QYETEVVKEIVNTIIRRLNHQPLSVGKNIVS 197

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           V   +E+++SL+      V  + I GIGG+ K TIA A++N+IS  ++GS F  N+RE  
Sbjct: 198 VH--LEKLKSLMNTNLNKVSVVGICGIGGVGKTTIAKAIYNEISYQYDGSSFLKNIRERS 255

Query: 216 ETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT--------- 260
           + G I  LQ++LL  + K  N +  NI+  ++ + R     +V ++FDDV          
Sbjct: 256 K-GDILQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLA 314

Query: 261 -------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  + S +IIT+RDKQVL     +  Y + +L   +A ++F  WAF  +     + 
Sbjct: 315 EEKDWFEAKSTIIITSRDKQVLAQYGVDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVYK 374

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L+   I YA G+PLALKVLG  L G+++  WESA+ KL+ IPH+EI  VL+IS+D LDD
Sbjct: 375 NLSYNIIDYANGLPLALKVLGGSLFGKTRSEWESALCKLKTIPHMEIHNVLRISFDGLDD 434

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD--ASKSLINLD-------LFYRIRMHDLLRDMGR 424
             K +FLD+ACF +G  +D V  I    A   +  LD           + MHDL++ MG 
Sbjct: 435 VDKGIFLDVACFFKGNDKDYVSRILGPYAEYGITTLDDRCLLTISKNMLDMHDLIQQMGW 494

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGT---------EAIEGISLDMNKVNREIH 475
           EI+R+E + + G+R+RLW   D Y VL +N            +  +G  L     +  + 
Sbjct: 495 EIIRQECLENLGRRSRLW-DSDAYHVLTRNMSDPTPACPPSLKKTDGACLFFQNSDGGVF 553

Query: 476 MNSYAFSKMP-----KLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           +     S MP     + R L  + D      SH       E+ +L W   PL+ L  N  
Sbjct: 554 LEK---SDMPPPFSSRGRDLPLFCDFE--FSSH-------ELTYLYWDGYPLEYLPMNFH 601

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
           A+ LV L +    ++QLW    +L   L       +  +I      ++PD   + NLE L
Sbjct: 602 AKNLVELLLRNNNIKQLWRG-NKLHKKLKVIDLSYSVHLI------KIPDFSSVPNLEIL 654

Query: 587 TVKGTT 592
           T++G T
Sbjct: 655 TLEGCT 660



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 12/130 (9%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+        C  LE  P+   ++E L  L + GT IRE+P S+ RL 
Sbjct: 906  NLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLR 965

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L LS   NL  +PESI +L+    L +S C     LP+   NLG L      SLE 
Sbjct: 966  GLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD---NLGRLQ-----SLEH 1017

Query: 665  LPAG-LSSMS 673
            L  G L SM+
Sbjct: 1018 LFVGYLDSMN 1027



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 60/341 (17%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTV-------------------- 588
            LP S+C   +  T  +  C    +LPD L   ++LE+L V                    
Sbjct: 981  LPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFVGYLDSMNFQLPSLSGLCSLR 1040

Query: 589  ----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
                +   +RE P  +  LS +  L L  N +  RIP+ I  L  L    +SHC+ LQ +
Sbjct: 1041 ILMLQACNLREFPSEIYYLSSLVMLYLGGN-HFSRIPDGISQLYNLKHFDLSHCKMLQHI 1099

Query: 645  PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL 704
            PELP  L  L A +CTSLE L +  S + S L+   C   ++   E+  IV+        
Sbjct: 1100 PELPSGLTYLDAHHCTSLENLSSQSSLLWSSLFK--CLKSQIQGVEVGAIVQ-------- 1149

Query: 705  YEERGIKKSMYFP-GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
                      + P  N IP+W  HQ  G   T++  P      +  + F  C++ V P  
Sbjct: 1150 ---------TFIPESNGIPEWISHQKSGFQITMEL-PWSWYENDDFLGFVLCSLHV-PLD 1198

Query: 764  LKYFRHKS--GEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGE 821
             +  +H+S   + ++D +  +   D  R  +         +  Y E +        +   
Sbjct: 1199 TETAKHRSFNCKLNFDHDSASFLLDVIRFKQS-------CECCYDEDESNQGWLIYYSKS 1251

Query: 822  YFGPNYDEFSFR-IHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                 Y    +R +  SF+     + G+V++CG HF+YA D
Sbjct: 1252 NIPKKYHSNEWRTLKASFYGHSSNKPGKVERCGFHFLYAHD 1292



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 53/138 (38%), Gaps = 33/138 (23%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE-------------- 622
            P EL++L     K  T   LP S+     +  L  S  S LE  PE              
Sbjct: 893  PLELDSLCLRDCKNLT--SLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLD 950

Query: 623  ---------SIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLS 670
                     SI+ L  L  LF+S C+ L  LPE  CNL     L    C +  KLP  L 
Sbjct: 951  GTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLG 1010

Query: 671  SMSS-----VLYVNLCNF 683
             + S     V Y++  NF
Sbjct: 1011 RLQSLEHLFVGYLDSMNF 1028


>gi|357499539|ref|XP_003620058.1| Resistance protein [Medicago truncatula]
 gi|355495073|gb|AES76276.1| Resistance protein [Medicago truncatula]
          Length = 1907

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 255/831 (30%), Positives = 397/831 (47%), Gaps = 135/831 (16%)

Query: 1    MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
            +Y++ L   G DTR  FT +L+  L+ K I TFIDD  L RGD I+ SLL  I+ S I I
Sbjct: 761  IYEILL---GTDTRHGFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLLKAIDESRIFI 817

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
             +FS  YASS +                      F+ V+P++VR    S+G+  +   KR
Sbjct: 818  PVFSLNYASSSFCLDELVHIIHCYETKGRLVLPVFFGVEPTNVRHHKGSYGKALAEHEKR 877

Query: 99   F---PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
            F   P+ M+R   WK AL++AA+LSG+  +  R E K IEEI   +  ++          
Sbjct: 878  FQNDPKNMERLQGWKEALSQAANLSGYHDSPPRYEYKFIEEIVKYISNKISRQPLHVANY 937

Query: 153  LVGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
             VG++  ++ ++S+L  GS+ GV  + I+GIGG+ K T+A A++N ++  FEG  F  NV
Sbjct: 938  PVGLQSQVQRVKSILDNGSDDGVHMVGIFGIGGLGKSTLARAIYNLVADQFEGLCFLHNV 997

Query: 212  REAEETGGIKDLQKKLL-----SELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----- 261
            R       ++ LQ+KLL     SE++ D     I     RL RKK+ ++ DDV       
Sbjct: 998  RMNSAKNNLEHLQEKLLFKTTGSEINLDHVSDGIPIIKERLCRKKILLILDDVDKLDQLQ 1057

Query: 262  -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                       GSRVIITTRDK +L +    K Y +K L   +A +L    AF  D++ +
Sbjct: 1058 ALAGGLDWFGPGSRVIITTRDKHLLDHHGIEKTYAVKGLNGTEALELLRWMAFKSDNVPS 1117

Query: 311  SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             + E+  +A+ Y  G+PL ++++G  L G++ E W+  +   + IP+ EI+++L++SYD+
Sbjct: 1118 RYKEILSRAVSYVSGLPLVIEIVGSNLFGKNIEEWKYILDGYDRIPNKEIQKILRVSYDA 1177

Query: 371  LDDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYR-IRM 415
            L++ +++VFLDIAC  +G   ++   +                A KSLIN    Y  + +
Sbjct: 1178 LEEEEQSVFLDIACCFKGHGWEDAKYMLHAHYGHSITHHLAVLAEKSLINQYREYGCVTL 1237

Query: 416  HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
            HDL+ DMG+E+VR+ES   PG+R+RL    DI +VL++NT  + ++ ++LD    + E  
Sbjct: 1238 HDLIEDMGKEVVRQESTKEPGERSRLCCQDDITRVLRENTKFQNMKILTLD----DCEYL 1293

Query: 476  MNSYAFSKMPKLRFLRFYGDKNKCMV-------SHLEGVPFAEVRHLE-WPQ---CPLKT 524
             +    S +  L  L F   KN   +       S LE +     R L+ +P      LK 
Sbjct: 1294 THIPDVSSLSNLEKLSFEHCKNLITIHNSIGHLSKLERLSVTGYRKLKHFPPLGLASLKE 1353

Query: 525  LNI----CAEKLVSL--KMPCTK-VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
            LN+    C E    L  KM   K ++  +  + +LP S         F +     + R P
Sbjct: 1354 LNLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQNLSELDEFTV--SYGILRFP 1411

Query: 578  DELENLEYLTVKGTTIREL------PESLG-RLSWVKRLILSN--NSNLERIPESIRHLS 628
            +  + +  +     T   L       E L   L W   +   +   S+ + +PE +    
Sbjct: 1412 EHNDKMYSIVFSNMTKLSLFDCYLSDECLPILLKWCVNMTYLDLSYSDFKILPECLSESH 1471

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
             L  + + +C+ L+ +  +P NLG L A  C SL       SS   +L            
Sbjct: 1472 HLVEIIVRYCKSLEEIRGIPPNLGSLYAYECKSLS------SSCRRML------------ 1513

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFP-GNE--IPKWFRHQSMGSSATL 736
                       M   L+E R  +    FP G E  IP WF HQS G + + 
Sbjct: 1514 -----------MSQQLHEARCTR--FDFPNGTELGIPDWFEHQSRGDTISF 1551



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 167/594 (28%), Positives = 274/594 (46%), Gaps = 122/594 (20%)

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLL-----SELSK 233
           I+GIGG+ K T+A A++N ++  FEG  F  +VRE      +K LQ+KLL     S++  
Sbjct: 4   IFGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENSAQNDLKHLQEKLLLKTTGSKIKL 63

Query: 234 DGNMRNIESQLNRLARKKVRIVFDDVTSGSRV--------------IITTRDKQVLKNCW 279
           D     I     RL RKK+ ++ DDV    ++              ++T + K +  +  
Sbjct: 64  DHVCEGIPFIKERLCRKKILLILDDVDDRKQLHALAGGLALVEKAKLVTEKMKFLTNSMV 123

Query: 280 ANKKYRMKELVYADAHKL----FCQWA----FG----------GDHLDASH-IELT---- 316
           A     ++E  +   HK+    FC ++    FG            HL ASH IE T    
Sbjct: 124 AKFSDGIREGFHVFPHKISLTNFCFFSSVDWFGPGSRVIITTRNKHLLASHRIEKTYPVE 183

Query: 317 -----------------------------DKAIKYAQGVPLALKVLGCYLCGRSKEVWES 347
                                        ++A+ YA G+PL L+V+G  L G++ E W++
Sbjct: 184 GLNGIDALELLRWMAFKNDNVPSGYEDILNRAVAYASGLPLVLEVMGSNLFGKNIEEWKN 243

Query: 348 AMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------- 399
            +   + IP+ EI+++L++SYD+L++ +++VFLDIAC L+G    EV +I          
Sbjct: 244 TLDGYDRIPNKEIQKILRVSYDALEEEEQSVFLDIACCLKGYRLTEVENILHSHYDHCIT 303

Query: 400 ------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
                 A KSLI+ +  Y + +H+L+ DMG+E+VR+ESI  PG+R+RL  H DI  VLK+
Sbjct: 304 HHLRVLAEKSLIDTNYCY-VTLHNLIEDMGKEVVRQESIKEPGERSRLCCHDDIVNVLKE 362

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVR 513
           NTGT  I+ + ++ + +   I     AF KM +L+ L     +N      L+ +P + ++
Sbjct: 363 NTGTSKIQMMYMNFHSMESIIDQKGMAFKKMTRLKTLII---ENGHCSKGLKYLP-SSLK 418

Query: 514 HLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKML 573
            L+W  C  K+                                  F       +  CK L
Sbjct: 419 ALKWEGCLSKS-------------------------LSSSILSKKFPDMTVLTLDHCKYL 453

Query: 574 ERLPD--ELENLEYLTVK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
             +PD   L NLE L+ +    +  +  S+G L+ ++RL        +R P     L+ L
Sbjct: 454 THIPDVSGLSNLEKLSFEYCDNLITIHNSIGHLNKLERLSAFGCREFKRFPP--LGLASL 511

Query: 631 TFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLCN 682
             L + +CE L + PEL C +  +       TS+ +LP    ++S +  +++ N
Sbjct: 512 KELNLRYCESLDSFPELLCKMTNIDNIWLQHTSIGELPFSFQNLSELDELSVVN 565


>gi|42568353|ref|NP_199459.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008006|gb|AED95389.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1127

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 229/728 (31%), Positives = 372/728 (51%), Gaps = 87/728 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R+ F SH    L  K I +F D+++ R  ++   L   I  S IA+++
Sbjct: 14  YHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKHGIRNSRIAVVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
           FS+ YASS W                      FY +DPSHVRKQ+  FG+ F +  R + 
Sbjct: 74  FSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFGKIFEKTCRNKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            ++  RWK ALT+ A++ G+       E+ +IEEIAND+L +++ +  +  + LVG+E  
Sbjct: 134 VDEKIRWKEALTDVANILGYHIVTWDNEASMIEEIANDILGKMNISPSNDFEDLVGIEDH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV-----REA 214
           I ++ SLL + SE V  + IWG  GI K TIA A+F+++S  F+ S F   V      E 
Sbjct: 194 ITKMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEV 253

Query: 215 EETGGIKD------LQKKLLSELSKDGNMRNIESQLNRLARKKVRI-------------V 255
                + D      LQ+  L+E+    +++     + ++ + +  +              
Sbjct: 254 YSGANLVDYNMKLHLQRAFLAEIFDKKDIKIHVGAMEKMVKHRKALIVIDDLDDQDVLDA 313

Query: 256 FDDVT----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
             D T    SGSR+I+ T +K  L+    +  Y++     A A ++FC+ AF  +     
Sbjct: 314 LADQTQWFGSGSRIIVVTENKHFLRANRIDHIYKVCLPSNALALEMFCRSAFKKNSPPDD 373

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +EL+ +    A  +PL L VLG  L G +K  W   + +L+ +   +I + L++SYD L
Sbjct: 374 FLELSSEVALRAGNLPLGLNVLGSNLRGINKGYWIDMLPRLQGLDG-KIGKTLRVSYDGL 432

Query: 372 DDSQ-KNVFLDIACFLEGEHRDEVISIFDASKSLINLDL------------FYRIRMHDL 418
           ++ + + +F  IAC   GE   ++  +   S   +N+ L            F  + MH L
Sbjct: 433 NNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTLEMHSL 492

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+++G+EIVR +S N PG+R  L   KDI  VL+ NTGT+ + GI+LD+++ + E+H++ 
Sbjct: 493 LQELGKEIVRTQS-NQPGEREFLVDLKDICDVLEHNTGTKKVLGITLDIDETD-ELHIHE 550

Query: 479 YAFSKMPKLRFLRFYG---DKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICA 529
            +F  M  L FL+ Y    D+ K +  HL    + +P + +R L + + P K L  N   
Sbjct: 551 SSFKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLP-SRLRLLRFDRYPSKCLPSNFHP 609

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           E LV L+M  +K+E+LWD V     SL   +     ++   + L+ +PD     NLE L 
Sbjct: 610 ENLVKLQMQQSKLEKLWDGVH----SLAGLR---NMDLRGSRNLKEIPDLSMATNLETLK 662

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           +   +++ ELP S+  L+ +  L +S   +LE IP  + +L  L  L +S C RL++  +
Sbjct: 663 LSSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFLD 721

Query: 647 LPCNLGLL 654
           +P N+  L
Sbjct: 722 IPTNISWL 729



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 29/212 (13%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP+ +    + I+ ++  C  L+  PD   N+  L +  T I E+P S+ +LS +  L +
Sbjct: 807 LPTGI-NLDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPLSIEKLSLLCYLDM 865

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
           +  SNL  +  +I  L  L     S C  L             ++ N +S E +    + 
Sbjct: 866 NGCSNLLCVSPNISKLKHLERADFSDCVELTE-----------ASWNGSSSEMVKLLPAD 914

Query: 672 MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMG 731
             S + +N  N  KLD               +L + +     +   G E+P +F H++ G
Sbjct: 915 NFSTVKLNFINCFKLDLT-------------ALIQNQTFFMQLILTGEEVPSYFTHRTSG 961

Query: 732 SSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
            S +L    P  +      SF  C V+   +F
Sbjct: 962 DSISL----PHISVCQSFFSFRGCTVIDVDSF 989


>gi|15238695|ref|NP_197298.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9757889|dbj|BAB08396.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|91806874|gb|ABE66164.1| disease resistance protein [Arabidopsis thaliana]
 gi|332005108|gb|AED92491.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 780

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 239/761 (31%), Positives = 379/761 (49%), Gaps = 81/761 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R NF SHLH  L    I  F D  + R  +I   L   I  S I I++
Sbjct: 16  YHVFPSFCGEDVRRNFLSHLHKELQHNGIDAFKDGGIKRSRSIWPELKQAIWESKIFIVV 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YA S W                      FY VDPS VRKQ+  FG+ F ++   R 
Sbjct: 76  LSKNYAGSCWCLDELVEIMECREVVGKTLVPIFYDVDPSSVRKQTGDFGKAFDKICDVRT 135

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+ +RW+ ALT   +++G  S+    ++K+IE+I   V + L     S + + L+G+E 
Sbjct: 136 EEERQRWRQALTNVGNIAGECSSKWDNDAKMIEKIVAYVSEELFCFTSSTDFEDLLGLEA 195

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRH----FEGSYFALNVREA 214
            +  ++S+L + S  V  + +WG  GI K TI   ++N++S      F+   F  NV+ +
Sbjct: 196 HVANLKSMLGLESNEVKMIGVWGPAGIGKTTITRILYNQLSSSNDDDFQLFIFMENVKGS 255

Query: 215 ---EETGGIK---DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT------ 260
              +E  G      L+++ LSE++    ++  ++     RL  +K  IV DDV       
Sbjct: 256 YRRKEIDGYSMKLHLRERFLSEITTQRKIKVSHLGVAQERLKNQKALIVLDDVDELEQLR 315

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +G+R+++TT D+Q+LK       Y +      +A K+ CQ AFG +    
Sbjct: 316 ALADQTQWVGNGTRILVTTEDRQLLKAHGITHVYEVDYPSRDEALKILCQCAFGKNSAPE 375

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            + +L  + ++ A  +PL L VLG  L G SK+ W +A+ +L    + +IE++L++ Y+ 
Sbjct: 376 GYNDLAVEVVELAGYLPLGLSVLGASLRGMSKKEWINALPRLRTSLNGKIEKLLRVCYEG 435

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHD 417
           LD+  K +FL IAC   G++ D V  +   S             +SLI++D    I MH 
Sbjct: 436 LDEKDKAIFLHIACLFNGKNVDRVKLLLAKSALDVEFGLKVLVDRSLIHIDADGYIVMHC 495

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL+ +G+EI R + ++ PGKR  L    +I  VL   TGTE + GISLDM+++  +++++
Sbjct: 496 LLQQLGKEITRGQCLDEPGKRKFLVDSLEISDVLADETGTETVLGISLDMSEIEDQVYVS 555

Query: 478 SYAFSKMPKLRFLRFY----GDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAE 530
             AF KMP L+FL  Y     +  K  + H L+ +P  ++R L W   P K L      E
Sbjct: 556 EKAFEKMPNLQFLWLYKNFPDEAVKLYLPHGLDYLP-RKLRLLHWDSYPKKCLPSKFRPE 614

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
            LV L M  +K+E+LW+ +Q L  SL       + +I D   L R  + LE L     K 
Sbjct: 615 FLVELTMRDSKLEKLWEGIQPL-KSLKRMDLSASTKIKDIPNLSRATN-LEKLYLRFCKN 672

Query: 591 TTIRELPES-LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             I  +P S L  L  +K L +S    L+ +P++I +L  L+ L +  C +L   P +  
Sbjct: 673 LVI--VPSSCLQNLHKLKVLDMSCCIKLKSLPDNI-NLKSLSVLNMRGCSKLNNFPLIST 729

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
            +  +S    T++EK+P+ +   S ++ + +  C  LK  P
Sbjct: 730 QIQFMSLGE-TAIEKVPSVIKLCSRLVSLEMAGCKNLKTLP 769


>gi|357500591|ref|XP_003620584.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495599|gb|AES76802.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1392

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 240/717 (33%), Positives = 372/717 (51%), Gaps = 97/717 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT  L   L  K I  F DD  L +G++I   LL  IE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALQTKGIIVFSDDTNLPKGESIGPELLRAIEGSQVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS VRKQS  +G  F +  +RF
Sbjct: 80  VFSINYASSTWCLQELEKICECVKGSGKHVLPVFYDVDPSEVRKQSGIYGEAFMKHEQRF 139

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            +   K+ +W++AL +   +SG+D    +P++  I++I   ++  L+      +K LV +
Sbjct: 140 QQEHQKVSKWRDALKQVGSISGWDLRD-KPQAGEIKKIVQKIMSTLECKSSCVSKDLVAI 198

Query: 157 ECSIEEIES-LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +  +E +++  L    +GV  + IWG+GGI K T+A  ++ +I   F+ S F  +V +  
Sbjct: 199 DSRLEALQNHFLLDMVDGVRAIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKIF 258

Query: 216 ET-GGIKDLQKKLLS-----ELSKDGNMRNIESQL-NRLARKKVRIVFDDVT-------- 260
               G  D QK++L      E  +  N  +    + NRL+R+K  ++ D+V         
Sbjct: 259 RLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRNRLSREKTLLILDNVDQVEQLERI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR++I +RD+ +LK    +  Y++  L +A+AHKLFC+ AF  + +  S+
Sbjct: 319 GVHREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLLNWAEAHKLFCRKAFKAEKIIMSN 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            + L ++ ++YA G+PLA+KVLG YL GR+   W+S +  L   P  ++ +VL++S+D L
Sbjct: 379 YKNLANEILRYANGLPLAIKVLGSYLFGRNVTEWKSTLASLRESPDNDVMDVLQLSFDGL 438

Query: 372 DDSQKNVFLDIACFLE--------------GEHRDEVISIFDASKSLINLDLFYRIRMHD 417
            + +K +FLDIACF                G H D  +S+  A KSLI++    RI MH 
Sbjct: 439 KEMEKEIFLDIACFSTFRNEKYVKNILNCCGFHADIGLSVLIA-KSLISIS-NSRIIMHS 496

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL+++GR+IV+  S   P K +RLW  K  Y V  +N   + ++ I LD  +V+ E    
Sbjct: 497 LLQELGRKIVQNSSCKEPRKWSRLWSAKQFYNVKMENMEKQ-VKAIVLDDEEVDVE---- 551

Query: 478 SYAFSKMPKLRFLRF-YGDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKTL--NICAEK 531
               SKM  LR L   YG        ++ G P     ++R++EW + P K L  +    +
Sbjct: 552 --QLSKMSNLRLLIIRYG-------MYISGSPSCLSNKLRYVEWDEYPSKYLPSSFHPNE 602

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           LV L +  + + QLW + + LP +L T     + E      LE++ D  E  NLE+L ++
Sbjct: 603 LVELILVKSNITQLWKNKKYLP-NLRTLDLSHSIE------LEKIIDFGEFPNLEWLNLE 655

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           G T + EL  S+G L  +  L L N  NL  IP +I  L  L  L IS C ++   P
Sbjct: 656 GCTNLVELDPSIGLLRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCSKVFNKP 712



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 52/287 (18%)

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
            +R++P ++  L W++RL L  N +   +P S+R LSKL +L + HC  L++LP+LP    
Sbjct: 778  LRQVPGTIECLHWLERLNLGGN-DFVTLP-SLRKLSKLVYLNLEHCRLLESLPQLPSPTS 835

Query: 653  LLSARNCTSLE-KLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL------Y 705
            +   R+    E KL  GL     V++    N  KL   E    +   W    +      Y
Sbjct: 836  I--GRDHREKEYKLNTGL-----VIF----NCPKLGERERCSSMTFSWTTQFIQAYQQSY 884

Query: 706  EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV-VFPAFL 764
                 +  +  PGNEIP W  +QSMG S  +   P      N +I F  C V  + P+  
Sbjct: 885  PTYLDEFQIVSPGNEIPSWINNQSMGDSIPVDQTPIMHDNNNNIIGFLCCVVFSMTPSRR 944

Query: 765  KYFRHKSGEDDWDGNVYAV----------CCDWKRKSEGHLYSWFLGKISYVESDHVFLG 814
                 +S   +  G    +            D       HL+  +L + SY    H F G
Sbjct: 945  SNIDPRSIYMEIGGTRKRIWLPVRVAGMFTDDLITMKSSHLWLIYLPRESY----HKFAG 1000

Query: 815  CNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                 G + G                   L   EVK CG H+V  QD
Sbjct: 1001 IKRVAGMFLGNK-----------------LSGMEVKSCGYHWVCKQD 1030


>gi|356548851|ref|XP_003542812.1| PREDICTED: TMV resistance protein N-like [Glycine max]
 gi|356548853|ref|XP_003542813.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 560

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 204/518 (39%), Positives = 288/518 (55%), Gaps = 64/518 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRGEDTR +FT +L++ L  + I TFI D     G+ I  SL   IE S + +
Sbjct: 13  VYDVFLSFRGEDTRRSFTGNLYNCLEKRGIHTFIGDYDFESGEEIKASLSEAIEHSRVFV 72

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+FSE YASS W                      F+ V+PSHVR Q   +G   +   +R
Sbjct: 73  IVFSENYASSSWCLDGLVRILDFTEDNHRPVIPVFFDVEPSHVRHQKGIYGEALAMHERR 132

Query: 99  F-PE--KMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
             PE  K+ +W+NAL +AA+LSG+   +    E KLIE+I  D+  ++  +    ++  V
Sbjct: 133 LNPESYKVMKWRNALRQAANLSGYAFKHGDGYEYKLIEKIVEDISNKIKISRPVVDRP-V 191

Query: 155 GVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G+E  + E++ LL   S  GV  + I GIGGI K T+A AV++  + HF+ S F  NVRE
Sbjct: 192 GLEYRMLEVDWLLDATSLAGVHMIGICGIGGIGKTTLARAVYHSAAGHFDTSCFLGNVRE 251

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTS------ 261
                G+  LQ+ LL+E+ ++ N+R  ++E  ++     L RK++ +V DDV        
Sbjct: 252 NAMKHGLVHLQQTLLAEIFRENNIRLTSVEQGISLIKKMLPRKRLLLVLDDVCELDDLRA 311

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTRD+ +LK    +K Y ++ L   +A +L C  AF  D +   
Sbjct: 312 LVGSPDWFGPGSRVIITTRDRHLLKAHGVDKVYEVEVLANGEALELLCWKAFRTDRVHPD 371

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            I   ++AI +A G+PLAL+++G  L GR  E WES + + E  P  +I   LKIS+D+L
Sbjct: 372 FINKLNRAITFASGIPLALELIGSSLYGRGIEEWESTLDQYEKNPPRDIHMALKISFDAL 431

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHD 417
              +K VFLDIACF  G    E+  I  A               KSLI +D   R++MHD
Sbjct: 432 GYLEKEVFLDIACFFNGFELAEIEHILGAHHGCCLKFHIGALVEKSLIMIDEHGRVQMHD 491

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           L++ MGREIVR+ES  HPGKR+RLW  +DI  VL+ NT
Sbjct: 492 LIQQMGREIVRQESPEHPGKRSRLWSTEDIVHVLEDNT 529


>gi|334188321|ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008726|gb|AED96109.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1181

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 241/773 (31%), Positives = 375/773 (48%), Gaps = 123/773 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R +F SHL   L  KSI TFID+ + R   I+  LL  I  S I+I++
Sbjct: 11  YDVFPSFSGEDVRKSFLSHLLKKLHRKSINTFIDNNIERSHAIAPDLLSAINNSMISIVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS++YASS W                      FY VDPS VRKQ+  FG  F        
Sbjct: 71  FSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQTREFGEFFKVTCVGKT 130

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVEC 158
           E +K+ W  AL E A ++G DS     E+ +IE IA DVL +L AT  S   G LVG+E 
Sbjct: 131 EDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIATSSSNCFGDLVGIEA 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            ++ ++S+LC+ SE    + I G  GI +                               
Sbjct: 191 HLKAVKSILCLESEEARMVGILGPSGIDQ------------------------------- 219

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------G 262
             KDL+      +S+ G ++       RL  KKV IV DDV +                G
Sbjct: 220 --KDLK------ISQLGVVKQ------RLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPG 265

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SR+I+TT+D+ +LK+   +  Y +       A ++ C+ AF  +      ++L ++  + 
Sbjct: 266 SRIIVTTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTEL 325

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
              +PLAL ++G  L GR KE W   M  L   +   EI + L++SYD L  + + +FL 
Sbjct: 326 VGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEIFLY 385

Query: 382 IACFLEGEHRDEVISIFD----------ASKSLINLD-LFYRIRMHDLLRDMGREIVRKE 430
           IAC L     + +IS+            A KSLI++  L   + MH LL+ +GR+IVR E
Sbjct: 386 IACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDE 445

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
           S  +PGKR  L   +DI  V   NTGTE + GISL+  ++N  + ++  +F  M  L+FL
Sbjct: 446 SFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNLQFL 505

Query: 491 RFY-------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK 541
           + +       G+    +   L  +P  ++R L W + PL+ +  N  AE LV+L+M  ++
Sbjct: 506 KVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFPLRCMPSNFKAEYLVNLEMAYSQ 564

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLTVKGTTIREL 596
           +E+LW+  Q+L S     K     ++   + L+ +PD      LE ++  + K  ++  L
Sbjct: 565 LERLWEGTQQLGS----LK---KMDLSKSENLKEIPDLSYAVNLEEMDLCSCK--SLVTL 615

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           P S+  L  ++ L +S+ SN+E +P  + +L  L  L +  C +L++ P++  N+ +L+ 
Sbjct: 616 PSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNL 674

Query: 657 RNCTSLEKLPAGLSSMSSVLYV--NLCNFLKLDPNELSEIVKDGWMKHSLYEE 707
                 E+    + +MS + ++  + C    L  N   E +    M HS  E+
Sbjct: 675 SGTAIDEESSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEK 727



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 170/456 (37%), Gaps = 139/456 (30%)

Query: 509  FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------ 554
             + + HL W  CPLK+L  N   E LVSL M  +K+E+LW+  Q   +            
Sbjct: 690  MSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKL 749

Query: 555  ----SLCTFKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELP-----ESLG 601
                +L       T ++  CK L  +P  +++L  LT     + T +  LP     ESL 
Sbjct: 750  KEFPNLSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPTDVNLESLH 809

Query: 602  RLSW---------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
             L                 ++RL+L +++ +E +P  I    +LT L +  C+RL+ +  
Sbjct: 810  TLDLSGCSKLTTFPKISRNIERLLL-DDTAIEEVPSWIDDFFELTTLSMKGCKRLRNIST 868

Query: 647  LPCNLGLLSARNCTSLEKLPA------------------GLSSMSSVLY---------VN 679
              C L  +   N +  E+L                     L   +S L+         V+
Sbjct: 869  SICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVS 928

Query: 680  LCNFLKLDPNELS--------EIVKDGWMKHSLYEERGIKKSMY----FPGNEIPKWFRH 727
            +C  +   P  LS        +++           E  I +S +     PG ++P  F +
Sbjct: 929  ICAMVFKYPQALSYFFNSPEADLIFANCSSLDRDAETLILESNHGCAVLPGGKVPNCFMN 988

Query: 728  QSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLK----------YFRHKSGEDDW 776
            Q+ GSS ++   P   + Y+ + + F  C V+  P  L           YFR K  E   
Sbjct: 989  QACGSSVSI---PLHESYYSEEFLGFKACIVLETPPDLNFKQSWIWVRCYFRDKCVE--- 1042

Query: 777  DGNVYAVCCDWKRKSEGHLY--------SWFLGKISYVESD--------HVFLGCNSFGG 820
                ++V   W      HL            +G  S +++D        H++  CNS   
Sbjct: 1043 ----HSVQFSWDSNKMDHLLMINFRLPTKEIIGCPSQLDTDDLMFFFYHHMYYACNS--- 1095

Query: 821  EYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHF 856
             Y  P+              P  ++R  +K CGI F
Sbjct: 1096 -YVNPS--------------PCSVQR--IKGCGIKF 1114


>gi|10177584|dbj|BAB10815.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1160

 Score =  289 bits (740), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 229/728 (31%), Positives = 372/728 (51%), Gaps = 87/728 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R+ F SH    L  K I +F D+++ R  ++   L   I  S IA+++
Sbjct: 14  YHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKHGIRNSRIAVVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
           FS+ YASS W                      FY +DPSHVRKQ+  FG+ F +  R + 
Sbjct: 74  FSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFGKIFEKTCRNKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            ++  RWK ALT+ A++ G+       E+ +IEEIAND+L +++ +  +  + LVG+E  
Sbjct: 134 VDEKIRWKEALTDVANILGYHIVTWDNEASMIEEIANDILGKMNISPSNDFEDLVGIEDH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV-----REA 214
           I ++ SLL + SE V  + IWG  GI K TIA A+F+++S  F+ S F   V      E 
Sbjct: 194 ITKMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEV 253

Query: 215 EETGGIKD------LQKKLLSELSKDGNMRNIESQLNRLARKKVRI-------------V 255
                + D      LQ+  L+E+    +++     + ++ + +  +              
Sbjct: 254 YSGANLVDYNMKLHLQRAFLAEIFDKKDIKIHVGAMEKMVKHRKALIVIDDLDDQDVLDA 313

Query: 256 FDDVT----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
             D T    SGSR+I+ T +K  L+    +  Y++     A A ++FC+ AF  +     
Sbjct: 314 LADQTQWFGSGSRIIVVTENKHFLRANRIDHIYKVCLPSNALALEMFCRSAFKKNSPPDD 373

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +EL+ +    A  +PL L VLG  L G +K  W   + +L+ +   +I + L++SYD L
Sbjct: 374 FLELSSEVALRAGNLPLGLNVLGSNLRGINKGYWIDMLPRLQGLDG-KIGKTLRVSYDGL 432

Query: 372 DDSQ-KNVFLDIACFLEGEHRDEVISIFDASKSLINLDL------------FYRIRMHDL 418
           ++ + + +F  IAC   GE   ++  +   S   +N+ L            F  + MH L
Sbjct: 433 NNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTLEMHSL 492

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+++G+EIVR +S N PG+R  L   KDI  VL+ NTGT+ + GI+LD+++ + E+H++ 
Sbjct: 493 LQELGKEIVRTQS-NQPGEREFLVDLKDICDVLEHNTGTKKVLGITLDIDETD-ELHIHE 550

Query: 479 YAFSKMPKLRFLRFYG---DKNKCMVSHL----EGVPFAEVRHLEWPQCPLKTL--NICA 529
            +F  M  L FL+ Y    D+ K +  HL    + +P + +R L + + P K L  N   
Sbjct: 551 SSFKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLP-SRLRLLRFDRYPSKCLPSNFHP 609

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           E LV L+M  +K+E+LWD V     SL   +     ++   + L+ +PD     NLE L 
Sbjct: 610 ENLVKLQMQQSKLEKLWDGVH----SLAGLR---NMDLRGSRNLKEIPDLSMATNLETLK 662

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           +   +++ ELP S+  L+ +  L +S   +LE IP  + +L  L  L +S C RL++  +
Sbjct: 663 LSSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFLD 721

Query: 647 LPCNLGLL 654
           +P N+  L
Sbjct: 722 IPTNISWL 729



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 29/212 (13%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
           LP+ +    + I+ ++  C  L+  PD   N+  L +  T I E+P S+ +LS +  L +
Sbjct: 807 LPTGI-NLDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPLSIEKLSLLCYLDM 865

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
           +  SNL  +  +I  L  L     S C  L             ++ N +S E +    + 
Sbjct: 866 NGCSNLLCVSPNISKLKHLERADFSDCVELTE-----------ASWNGSSSEMVKLLPAD 914

Query: 672 MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMG 731
             S + +N  N  KLD               +L + +     +   G E+P +F H++ G
Sbjct: 915 NFSTVKLNFINCFKLDLT-------------ALIQNQTFFMQLILTGEEVPSYFTHRTSG 961

Query: 732 SSATLKTRPPRPAGYNKLISFAFCAVVVFPAF 763
            S +L    P  +      SF  C V+   +F
Sbjct: 962 DSISL----PHISVCQSFFSFRGCTVIDVDSF 989


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
           thaliana]
          Length = 1207

 Score =  289 bits (740), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 249/792 (31%), Positives = 379/792 (47%), Gaps = 111/792 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R    SH+      K I  FID+ + R  +I   L   I+ S IAI++
Sbjct: 94  HHVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVL 153

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 154 LSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKT 213

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G  S   R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 214 KEYVERWRKALEDVATIAGEHSRNWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMRA 273

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N+R      
Sbjct: 274 HMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRP 333

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 334 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 393

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++K     +A ++FC  AFG         E
Sbjct: 394 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQPHEGFDE 453

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL LKVLG  L G+SK  WE  + +L+      I  +++ SYD L D 
Sbjct: 454 IAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDGLCDE 513

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD--LFY--RIRMHD 417
            K +FL IAC  + E   +V  +               A KSLI++D   FY   I MH 
Sbjct: 514 DKYLFLYIACLFKDELSTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSFYGDTINMHT 573

Query: 418 LLRDMGREIVRKESINHP-GKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIH 475
           LLR  GRE  RK+ + H   KR  L   +DI +VL  +T  +    GI LD+ K   E++
Sbjct: 574 LLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGIHLDLYKSEEELN 633

Query: 476 MNSYAFSKMPKLRFLR----FYGDKNKCMVSHLEGVPFAEVRHLEWPQ----CPLKTLNI 527
           ++     ++    F+R    F  ++ +  +  L      ++R L+W      C   T N 
Sbjct: 634 ISEKVLERVHDFHFVRIDASFQPERLQLALQDL-ICHSPKIRSLKWYSYQNICLPSTFN- 691

Query: 528 CAEKLVSLKMPCTKVEQLW-----------------DDVQRLPSSLCTFKTPITFEIIDC 570
             E LV L M  +K+ +LW                 +D++ LP +L T       ++ DC
Sbjct: 692 -PEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDC 749

Query: 571 KMLERLPDELENLEYLT----VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
             L  LP  +E L  L      + +++ ELP S G  + ++ L L N S+LE++P SI +
Sbjct: 750 SSLVELPSSIEKLTSLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSSLEKLPPSI-N 807

Query: 627 LSKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
            + L  L + +C R+  LP  E   NL +L   NC+SL +LP  ++S +        N  
Sbjct: 808 ANNLQQLSLINCSRVVELPAIENATNLQVLDLHNCSSLLELPPSIASAT--------NLK 859

Query: 685 KLDPNELSEIVK 696
           KLD +  S +VK
Sbjct: 860 KLDISGCSSLVK 871


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 242/822 (29%), Positives = 392/822 (47%), Gaps = 150/822 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTRDNF   L+  L +K ++ F D++ + RGD I  SL  ++E S  ++I
Sbjct: 14  YDVFLSFRGADTRDNFGGRLYEAL-MKKVRVFRDNEGMKRGDEIGSSLQASMEDSAASVI 72

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + S  YA+S W                       FY VDPSHVRKQS  F + F +L K 
Sbjct: 73  VLSPNYANSHWCLDELAMLCDLKSSSLDRRMLPVFYMVDPSHVRKQSGDFDKDFQKLAKT 132

Query: 99  FPE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           F E ++KRWK+A+    +L+G+  +    E  +IE +   VL  L  T +   + +VG+E
Sbjct: 133 FSEAEIKRWKDAMKLVGNLAGYVCHKDSKEDDIIELVVKRVLAELSNTPEKVGEYIVGLE 192

Query: 158 CSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AE 215
             ++++  L+    S GV  L ++G+GGI K T+A A +NKI  +F+   F  ++RE + 
Sbjct: 193 SPMKDLMDLIVAESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFKQRAFISDIRERSS 252

Query: 216 ETGGIKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
              G+ +LQK L+ EL +     +   R +E     +  KK+ +V DDV           
Sbjct: 253 AEDGLVNLQKSLIKELFRLVTEIEDVSRGLEKIKENVHDKKIIVVLDDVDHIDQVNALVG 312

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  G+ ++ITTRD ++L     N++Y +K L  + A +LF   +   +    + +E
Sbjct: 313 ETRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTESQALQLFSYHSLRKEKPTDNLME 372

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L+ K ++ +  +PLA++V G  L  + +E  W++ + KL+      +++VL +S++SLDD
Sbjct: 373 LSTKIVRISGLLPLAVEVFGSLLYDKKEEKEWQTQLDKLKKTQPGNLQDVLALSFESLDD 432

Query: 374 SQKNVFLDIAC-FLEGE-HRDEVISI-----FDA--------SKSLINLDLFYRIRMHDL 418
            +K VFLDIAC FL  +  ++EV+ +     F+A         KSL+ +     + MHD 
Sbjct: 433 EEKKVFLDIACLFLRMQITKEEVVEVLKGCGFNAEAALSVLRQKSLVKIFANDTLWMHDQ 492

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK--------- 469
           +RDMGR++   E    P  R+RLW   +I  VL    GT +I+GI  D  K         
Sbjct: 493 IRDMGRKMDLTEIHGDPSIRSRLWDRAEIMTVLNNMKGTSSIQGIVFDFKKKPAWDPSAE 552

Query: 470 ---------------------------------VNREIHMNSYAFSKMPKLRFLRFYGDK 496
                                             + EI +    F  M KLR L+     
Sbjct: 553 DIALRNLQKSPGIKSVYSYLKNKFIPFREEEKPKSSEITIRVEPFVPMIKLRLLQI---N 609

Query: 497 NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS 554
           +  +  +L+ +P  E++ ++W  CPL+ L  +  A +L  L +  +++ ++     +   
Sbjct: 610 HVNLEGNLKLLP-PELKWIQWKGCPLENLPPDFLAGQLAVLDLSESRIRRVQSLRSKGVG 668

Query: 555 SLCTFKTPI--TFEIID---CKMLERLPDELEN---LEYLTV-KGTTIRELPESLGRLSW 605
           SL +    +    ++I+   C  LE +PD L N   LE L   +   + ++P S+G L  
Sbjct: 669 SLISTNGQVDENLKVINLRGCHSLEAIPD-LSNHKALEKLVFERCNLLVKVPRSVGNLRK 727

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPC------------ 649
           + +L L   S L    E +  L  L  LF+S C  L  LPE    +PC            
Sbjct: 728 LLQLDLRRCSKLSEFLEDVSELKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAIS 787

Query: 650 ----------NLGLLSARNCTSLEKLPAGLSSMSSV--LYVN 679
                      L  LS   C S+++LP  +  ++S+  LY++
Sbjct: 788 NLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLTSLEELYLD 829



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 10/164 (6%)

Query: 524 TLNICAEKLVSLKMPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKMLERLPD--- 578
            L++  E + S  MPC K E L D   +  LP S+   +      ++ C+ ++ LP    
Sbjct: 762 NLSVLPENIGS--MPCLK-ELLLDGTAISNLPDSIFCLQKLEKLSLMGCRSIQELPTCVG 818

Query: 579 ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--S 636
           +L +LE L +  T ++ LP+S+G L  +++L   + ++L +IP++I  L  L  LF+  S
Sbjct: 819 KLTSLEELYLDDTALQNLPDSIGNLKNLQKLHFMHCASLSKIPDTINELKSLKELFLNGS 878

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
             E L   P    +L  LSA  C  L+ +P+ +  ++ +L + L
Sbjct: 879 AVEELPLNPGSLPDLSDLSAGGCKFLKHVPSSIGGLNYLLQLQL 922



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 18/171 (10%)

Query: 580  LENLEYLTVKGTTIR-ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
            L +LE L  +   I  ++P+ L +L+ +K L L NN     +P S++ LS L  L +  C
Sbjct: 1065 LSSLEELDARSWAISGKIPDDLEKLTSMKILNLGNNY-FHSLPSSLKGLSNLKKLSLYDC 1123

Query: 639  ERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--V 695
              L+ LP LP  L  L   NC SLE + + LS++  +  +NL N  K +D   L  +  +
Sbjct: 1124 RELKCLPPLPWRLEQLILANCFSLESI-SDLSNLKFLDELNLTNCEKVVDILGLEHLTAL 1182

Query: 696  KDGWMKH-----SLYEERGIKKS-------MYFPGNEIPKWFRHQSMGSSA 734
            K  +M       SL  +R + K+       +  PGN IP WF    +  SA
Sbjct: 1183 KRLYMSGCNSTCSLAVKRRLSKASLKLLWNLSLPGNRIPDWFSRGPLTFSA 1233



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 570  CKMLERLPDELENLEYL---TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
            CK L+ +P  +  L YL    +  T I  LPE +G L ++ +L L N  +L+ +PESI+ 
Sbjct: 901  CKFLKHVPSSIGGLNYLLQLQLDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPESIKD 960

Query: 627  LSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMSSV 675
            + +L  L++     ++ LPE    L    LL   NC  L  LP     + S+
Sbjct: 961  MDQLHSLYL-EGSNIENLPEDFGKLEKLVLLRMNNCKKLRGLPESFGDLKSL 1011



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         E+ +CK L+ LP+   +++ L  L ++G+ I  LPE  G+L  
Sbjct: 927  IETLPEEIGDLHFLHKLELRNCKSLKGLPESIKDMDQLHSLYLEGSNIENLPEDFGKLEK 986

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L ++N   L  +PES   L  L  LF+       ++ +LP + G LS      + K 
Sbjct: 987  LVLLRMNNCKKLRGLPESFGDLKSLHRLFMQET----SVTKLPESFGNLSNLRVLKMLKK 1042

Query: 666  PAGLSSMS 673
            P   SS S
Sbjct: 1043 PFFRSSES 1050


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
           [Cucumis sativus]
          Length = 1195

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 250/744 (33%), Positives = 369/744 (49%), Gaps = 106/744 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTRD F SHL   L  + +  FIDD+L RG  IS+SLL +IE S I+III
Sbjct: 23  YDVFLSFRGEDTRDKFISHLDLALRREGVNFFIDDKLDRGKQISKSLLKSIEGSRISIII 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR-- 98
           FS+ YASS W                      FY V PS V KQ+  FG  F++      
Sbjct: 83  FSQNYASSTWCLDEVVKIIECMRSKKQTVLPVFYNVSPSEVVKQTGIFGEAFAKYETNPL 142

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVI--RPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              K++ WK ALT AA LSG+D        E+ LI+++   V         +  K  V +
Sbjct: 143 MTNKIQPWKEALTTAATLSGWDLGNYWKNNEAHLIQDLVKKVSILKQTQLLNVAKHPVAI 202

Query: 157 ECSIEEIESLLC--IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           +  ++ IE L    +   GV  + I G+GGI K T+A A++NKI+  FE   F  NVRE 
Sbjct: 203 DSQLKAIEELASHGVSDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLSNVRET 262

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVF----------- 256
           +E+  G+  LQ+KLL+E+ KD N++  N++  +N    RL  +KV +V            
Sbjct: 263 SEQFNGLVQLQEKLLNEIFKDNNLKVDNVDKGMNIIKDRLCSRKVLMVLDDVDKDDQLDA 322

Query: 257 -----DDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                D    GS++I+TTRD+ +L+    +K + ++ L    + +LFC  AF   H   +
Sbjct: 323 LVGGRDXFGRGSKIIVTTRDRHLLETYSFDKIHPIQLLDCDKSLELFCWHAFKQSHPSRN 382

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           + EL +  ++Y  G+PLAL +LG  LC R + +W+S + +L+  P   IE V +IS+  L
Sbjct: 383 YSELPE-LVRYCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAVFQISFKRL 441

Query: 372 DDSQ--KNVFLDIACFLEGEHRDEVISIFDA------SKSLINLDLFY------RIRMHD 417
            ++   K +FLDI CF  GE      ++  A      S+ +I +DL        +I+MHD
Sbjct: 442 PENPPVKEIFLDICCFFVGEDVSYSKNVLKACDPYLESRIIILMDLSLVTVEDGKIQMHD 501

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           L+R MG+ IVR++S     KR+RLW  K+  ++L + +GT  ++ I LD+   N  + + 
Sbjct: 502 LIRQMGQMIVRRKSFKX-RKRSRLWVAKEAVKMLIEKSGTHKVKAIKLDLRN-NGSLIVE 559

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKM 537
           + AF  M  LR L           + L    F  + +++W +         +   V    
Sbjct: 560 AEAFRNMENLRLLILQN------AAKLPTNIFKYLPNIKWIE--------YSSSSVRWYF 605

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTP-ITFEIIDCKM-----------LERLPD-----EL 580
           P + V      +  L  +  + K P I FE  DCKM           LE  PD      L
Sbjct: 606 PISFVVN--GGLVGLVINGVSNKHPGIIFE--DCKMLKHVDLSYWRLLEETPDFSAALNL 661

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           E L  L+ K   ++ +  S+  LS +  L L    NLE++P S   L  L  L +S C +
Sbjct: 662 EKLYLLSCK--RLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 719

Query: 641 LQTLPELPC--NLGLLSARNCTSL 662
           L+ +P+L    NL  L  R C  L
Sbjct: 720 LKEIPDLSASSNLKELHLRECYHL 743



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 22/145 (15%)

Query: 530 EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL-- 586
           ++L++LK+  C ++E+L       PS L   K+  +  + +C  +E+LP+  EN++ L  
Sbjct: 827 DQLIALKLDFCHQLEEL-------PSCL-RLKSLDSLSLTNCYKIEQLPEFDENMKSLRE 878

Query: 587 -TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             +KGT IR+LP S+  L  ++ LILS  +NL  +P  I  L  L  L +  C RL  LP
Sbjct: 879 MNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLP 938

Query: 646 ----------ELPCNLGLLSARNCT 660
                      L  NL +L  +NC 
Sbjct: 939 SGSSLNFPQRSLCSNLTILDLQNCN 963


>gi|357499581|ref|XP_003620079.1| Resistance protein [Medicago truncatula]
 gi|355495094|gb|AES76297.1| Resistance protein [Medicago truncatula]
          Length = 667

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 206/606 (33%), Positives = 325/606 (53%), Gaps = 73/606 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRG-DNISQSLLGTIEASCIAII 60
           +DVFLSFRG DTR +F  +LH  L  K I+TFIDD+ ++G D I+ SL   IE + I I 
Sbjct: 23  HDVFLSFRGSDTRYSFIGNLHKDLCRKGIRTFIDDRELKGGDEITPSLFKHIEETRIFIP 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS +                      FY V+PSHVR Q  S+ +      ++F
Sbjct: 83  VLSTNYASSSFCLDELVHIIHCFKESSRLVLPIFYDVEPSHVRHQHGSYAKALDDHIEKF 142

Query: 100 P------EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKG 152
                  E++++WK+ALT+ A+ SG   N     E + IE+I   V  +++         
Sbjct: 143 QNNKNNMERLQKWKSALTQTANFSGHHFNPRNGYEYEFIEKIVKYVSSKINRVPLYVADY 202

Query: 153 LVGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG++  + ++ S L + S G V  L I+G GG+ K T+A AV+N I+  F+G  F  NV
Sbjct: 203 PVGLQSRVLKVNSFLDLRSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLHNV 262

Query: 212 REAEETGGIKDLQKKLLSELSK-DGNMRNIESQL----NRLARKKVRIVFDDVTS----- 261
           RE     G++ LQ+KLLS+L + D  + ++   +     RL RKKV ++ DDV       
Sbjct: 263 RENSAKYGLEHLQEKLLSKLVELDVKLGDVNEGIPIIKQRLHRKKVLLILDDVHELKQLQ 322

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS+VIITT++K++L      + Y + +L   +A +L    AF  + +D 
Sbjct: 323 VLAGRLDWFGLGSKVIITTQEKKLLDGHGIERAYEIHKLNDKEALELLRWNAFKNNKVDT 382

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           +  ++  +A+ YA G+PLAL+V+G  L G++   W+SA+ + E  P  +I+E+LK+S+D+
Sbjct: 383 NFDDILHQAVTYASGLPLALEVVGSNLFGKNIREWKSALSQYERRPIRKIQEILKVSFDA 442

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLF---YRI 413
           L++ +KNVFLDIAC  +G    E+ +I  A               KSLI +  +   Y +
Sbjct: 443 LEEDEKNVFLDIACCFKGYELKELENILHAHYGNCMNYQIRVLHDKSLIKIYWYLGNYVV 502

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            +H L+  MG+EIV ++S   PG+R+RLW HKDI  VL++N G+  IE I L+      E
Sbjct: 503 TLHALIEKMGKEIVHEKSPKEPGRRSRLWFHKDIIHVLEENKGSSQIEIIYLEFPLSEEE 562

Query: 474 IHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           +    +   ++ K++ L+    KN       + +P + +R LEWP+ P + +  + C +K
Sbjct: 563 V--IEWKGDELKKMQNLKTLIVKNGSFSKGPKYLPNS-LRVLEWPKYPSRIIPSDFCPKK 619

Query: 532 LVSLKM 537
           L   K+
Sbjct: 620 LSICKL 625


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 231/754 (30%), Positives = 376/754 (49%), Gaps = 86/754 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 52  HDVFPSFHGADVRRTFLSHILESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 111

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY V+P+ ++KQ+  FG+ F++  R + 
Sbjct: 112 LSRKYASSSWCLDELAEIMKCREVLGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGKT 171

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G+ S+    E+++IE+I+ DV   LD +  SK+    VG+  
Sbjct: 172 KEHIERWRKALEDVATIAGYHSHKWSNEAEMIEKISTDVSNMLDLSIPSKDFDDFVGMAA 231

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            +E  E LL +  +    + IWG  GI K TIA  +FN++S  F+ S   +N++      
Sbjct: 232 HMERTEQLLRLDLDEARMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRP 291

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 292 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 351

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D+ +LK    N  Y+++     +A ++FC  AFG         +
Sbjct: 352 DTRWFGPGSRIIITTEDQGILKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPYEGFCD 411

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +    A  +PL LKVLG  L G SK  WE  + +L      +I  +++ SYD+L D 
Sbjct: 412 LAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGGIIQFSYDALCDE 471

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
            K +FL IAC    E   +V  +               A KSLI+ +    I+MH LL  
Sbjct: 472 DKYLFLYIACLFNNESTTKVEEVLANKFLDVGQGIHVLAQKSLISFE-GEEIQMHTLLEQ 530

Query: 422 MGREIVRKESINHPGKRNRLW-HHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSY 479
            GRE  RK+ ++H   +++L    +DI +VL  +T  +    GI LD++K   E++++  
Sbjct: 531 FGRETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRRFIGIHLDLSKNEEELNISEK 590

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGV--PFAEVRHLEWPQ----CPLKTLNICAEKLV 533
           A  ++   +F+R   DKN  +   L+ +     ++R L+W      C   T N   E LV
Sbjct: 591 ALERIHDFQFVRI-NDKNHALHERLQDLICHSPKIRSLKWYSYQNICLPSTFN--PEFLV 647

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L M  +K+++LW+  ++L       +     ++     L+ LP+     NLE L ++  
Sbjct: 648 ELDMSFSKLQKLWEGTKQL-------RNLKWMDLSYSSYLKELPNLSTATNLEELNLRNC 700

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--P 648
           +++ ELP S+ +L+ ++ L L   S+L  +P S  + +KL  L++ +C  L+ LP     
Sbjct: 701 SSLVELPSSIEKLTSLQILDLQGCSSLVELP-SFGNATKLEILYLDYCRSLEKLPPSINA 759

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
            NL  LS RNC+ + +LPA + + +++  +NL N
Sbjct: 760 NNLQKLSLRNCSRIVELPA-IENATNLWELNLLN 792



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 46/243 (18%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            C+K+E L  ++          K+  T  + DC  L+  P+   +++YL + GT I+E+P 
Sbjct: 867  CSKLEALPININ--------LKSLDTLNLTDCSQLKSFPEISTHIKYLRLTGTAIKEVPL 918

Query: 599  SLGRLSWVKRLILSNNSNLERIPES-------------------IRHLSKLTFLFISHCE 639
            S+   S +    +S   +L+  P +                   ++ +S+L +  +++C 
Sbjct: 919  SIMSWSPLAEFQISYFESLKEFPHAFDIITELQLSKDIQEVTPWVKRMSRLRYFRLNNCN 978

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
             L +LP+LP +L  L A NC SLEKL    ++    L+   C        +L++  +D  
Sbjct: 979  NLVSLPQLPDSLAYLYADNCKSLEKLDCCFNNPWISLHFPKC-------FKLNQEARDLI 1031

Query: 700  MKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTR-PPRPAGYNKLISFAFCAV 757
            M  S        +    PG ++P  F H++  G    +K +  P P      + F  C +
Sbjct: 1032 MHTS------TSRIAMLPGTQVPACFNHRATSGDYLKIKLKESPLPTT----LRFKACIM 1081

Query: 758  VVF 760
            +V 
Sbjct: 1082 LVM 1084



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 10/111 (9%)

Query: 565 FEIIDCKMLERLPDELEN-----LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLE 618
             +++C  L  LP  +       L+ L + G +++ +LP S+G ++ +K   LSN SNL 
Sbjct: 788 LNLLNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLV 847

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLP 666
            +P SI +L  L  L +  C +L+ LP +  NL  L   N   C+ L+  P
Sbjct: 848 ELPSSIGNLQNLCKLIMRGCSKLEALP-ININLKSLDTLNLTDCSQLKSFP 897


>gi|30684793|ref|NP_849410.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658793|gb|AEE84193.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 246/763 (32%), Positives = 393/763 (51%), Gaps = 82/763 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRG DTR +FTSHL   L  K I  F D +L  G+ IS  L   IE S ++I++
Sbjct: 17  FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISL-LFDRIEQSKMSIVV 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YA+S W                      FY+V  S V  Q+ SF   F    K F 
Sbjct: 76  FSEDYANSWWCLEEVGKIMQRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFN 135

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK-NKGLVGV 156
              +K++  K AL  A+++ GF       E   ++EI  +  + L+          L G+
Sbjct: 136 GDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI 195

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           E   +E+E LL     E V  + + G+ GI K T+A  V+ +  + F+G  F  ++ +  
Sbjct: 196 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNS 255

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQ---LNRLARKKVRIVFDDVT------------ 260
           +  G+  L +KLL +L  DG   ++ +Q    N L  KK+ IV D+VT            
Sbjct: 256 KRYGLPYLYQKLLHKLL-DGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKK 314

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR++I TRDK++L+   A+  Y +  L   +A +LFC   FG  +     ++L+
Sbjct: 315 NVYRQGSRIVIITRDKKLLQKN-ADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLS 373

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +  + YA+G+PLALK+LG  L       W+  +  L++ P  E+++ LK SY +LDD QK
Sbjct: 374 NDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALDDDQK 433

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDMG 423
           +VFLDIACF   E  D V SI  +              K L+ +  + RI MHDLL  MG
Sbjct: 434 SVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTIS-YDRIEMHDLLHAMG 492

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EI +++SI   G+R RLW+HKDI  +L+ NTGTE + GI L+M++V R I +   AF+ 
Sbjct: 493 KEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRR-IKLFPAAFTM 551

Query: 484 MPKLRFLRFYGD--KNKCMVSHL---EGVPF---AEVRHLEWPQCPLKTL--NICAEKLV 533
           + KL+FL+F+       C   H+     VP     E+ +L W   P   L  +   ++LV
Sbjct: 552 LSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELV 611

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTI 593
            L +  + ++QLW+D ++   SL       + ++++   L R     +NLE L ++G T 
Sbjct: 612 DLSLRYSHIKQLWED-EKNTESLRWVDLGQSKDLLNLSGLSR----AKNLERLDLEGCTS 666

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
            +L  S+ +++ +  L L + ++LE +P+  + +  L  L +S C +L+    +  ++  
Sbjct: 667 LDLLGSVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIES 725

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           L     T++E++   + S+ S++ +NL  C  LK  PN+L ++
Sbjct: 726 LHLEG-TAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKL 767



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 42/234 (17%)

Query: 522 LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE-- 579
           LK  +I +E + SL +  T +E++ + ++ L S        I   + +C+ L+ LP++  
Sbjct: 713 LKDFHIISESIESLHLEGTAIERVVEHIESLHSL-------ILLNLKNCEKLKYLPNDLY 765

Query: 580 -LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI-S 636
            L++L+ L + G + +  LP    ++  ++ ++L + +++++ PE    +S L+ L I S
Sbjct: 766 KLKSLQELVLSGCSALESLPPIKEKMECLE-ILLMDGTSIKQTPE----MSCLSNLKICS 820

Query: 637 HCERLQTLPELPCNLGL-LSARNCTSLEK------LPAGLSSMSSVLYVNLCNFLKLDPN 689
            C      P +  + GL L A  C SLE       +P     M +      C   KL+  
Sbjct: 821 FCR-----PVIDDSTGLYLDAHGCGSLENVSKPLTIPLVTERMHTTFIFTDC--FKLNQA 873

Query: 690 ELSEIVKDGWMKHSL-------YEERGI----KKSMYFPGNEIPKWFRHQSMGS 732
           E  +IV    +K  L       +  +G+      ++ FPG++IP WF HQ MGS
Sbjct: 874 EKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPLVAVCFPGHDIPSWFSHQKMGS 927


>gi|334183877|ref|NP_001185386.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197260|gb|AEE35381.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1183

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 232/699 (33%), Positives = 337/699 (48%), Gaps = 98/699 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR    SHL+  L    + TF DD+ +  GD I+  L+  I+ S  A++
Sbjct: 15  YDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKAIQTSWFAVV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           I SE YA+S W                      FY V PS VR Q  SF   F R     
Sbjct: 75  ILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPSDVRYQEGSFATAFQRYEADP 134

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT+ A+LSG  S     E+ +I E+   +  RL     +    LVG+E
Sbjct: 135 EMEEKVSKWRRALTQVANLSGKHSRNCVDEADMIAEVVGGISSRLPRMKSTDLINLVGME 194

Query: 158 CSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             + ++  LL IG E  V  + IWG+GGI K TIA  ++++ SR F    F  NV +  +
Sbjct: 195 AHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENVSKGYD 254

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS--------- 261
              IK LQK+LLS +   +D  + ++E+       RL  +KV +V D+V           
Sbjct: 255 ---IKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLHGLAK 311

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITTRDK +L +C  N  Y +K L   DA ++F + AFGG        +
Sbjct: 312 DPSWFGPGSRIIITTRDKGLLNSCGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDGFEQ 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L  +A + A G+P AL     +L    + + WE  +  LE  P   ++E+L+ SYD LD 
Sbjct: 372 LFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRASYDGLDQ 431

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDMGR 424
             K VFL +ACF  G H   + +            A+K L+N+ +   I MH LL   GR
Sbjct: 432 YDKTVFLHVACFFNGGHLRYIRAFLKNCDARINHLAAKCLVNISIDGCISMHILLVQTGR 491

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR+ES   P K+  LW   +I+ VL  NTGT  +EG+SL + ++   + + +  F  M
Sbjct: 492 EIVRQESDWRPSKQRFLWDPTEIHYVLDSNTGTRRVEGLSLHLCEMADTLLLRNSVFGPM 551

Query: 485 PKLRFLRFY----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
             L FL+F+    G+ +   +   + V    ++ L W   PL  L        ++ L + 
Sbjct: 552 HNLTFLKFFQHLGGNVSNLQLISDDYVLSRNLKLLHWDAYPLTILPPIFRPHTIIELSLR 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT-TIRELP 597
            +K+  LWD  + LP                            NL  L V G+  +RELP
Sbjct: 612 YSKLNSLWDGTKLLP----------------------------NLRILDVTGSRNLRELP 643

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIR--HLSKLTFLF 634
           E L     ++ LIL + ++L +IPESI   +L KL  ++
Sbjct: 644 E-LSTAVNLEELILESCTSLVQIPESINRLYLRKLNMMY 681



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 28/201 (13%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
            P   E LE       ++  L E L   + +  L LS+     RIP SIR LS +  L+++
Sbjct: 912  PGRNELLELSLENCKSLVSLSEELSHFTKLTYLDLSS-LEFRRIPTSIRELSFMRTLYLN 970

Query: 637  HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
            +C ++ +L +LP +L  L A  C SLE +    SS  S  +++  + + L+   +S++V+
Sbjct: 971  NCNKIFSLTDLPESLKYLYAHGCESLEHV--NFSSNHSFNHLDFSHCISLEC--ISDLVR 1026

Query: 697  DGWMKHSLYEERGI------KKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLI 750
            D +M     +E         K S+    N    W           ++ + P+     KL+
Sbjct: 1027 D-FMNEEYSQEAPFRLVCITKYSIASTNNMRTSW--------REPMRIKLPKIKAAPKLV 1077

Query: 751  SFAFCAVVV--------FPAF 763
             F    +VV        FPAF
Sbjct: 1078 GFFVQIMVVCEKPFHLQFPAF 1098



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 31/163 (19%)

Query: 573 LERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           +E +P+   +L+ LE L + G     LP S+G+L+ +K L LSN   L+ +P+    LS+
Sbjct: 806 IEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQ----LSQ 861

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSA----------RNCTSLEKLPAGLSSMSSV---- 675
           +  L +S C +L +L      +G+L A            C SL  L   LS   S     
Sbjct: 862 VERLVLSGCVKLGSL------MGILGAGRYNLLDFCVEKCKSLGSLMGILSVEKSAPGRN 915

Query: 676 ----LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
               L +  C  L     ELS   K  ++  S  E R I  S+
Sbjct: 916 ELLELSLENCKSLVSLSEELSHFTKLTYLDLSSLEFRRIPTSI 958


>gi|145337463|ref|NP_177427.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737528|dbj|BAF00706.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197259|gb|AEE35380.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1042

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 234/707 (33%), Positives = 341/707 (48%), Gaps = 101/707 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR    SHL+  L    + TF DD+ +  GD I+  L+  I+ S  A++
Sbjct: 15  YDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKAIQTSWFAVV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           I SE YA+S W                      FY V PS VR Q  SF   F R     
Sbjct: 75  ILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPSDVRYQEGSFATAFQRYEADP 134

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ +W+ ALT+ A+LSG  S     E+ +I E+   +  RL     +    LVG+E
Sbjct: 135 EMEEKVSKWRRALTQVANLSGKHSRNCVDEADMIAEVVGGISSRLPRMKSTDLINLVGME 194

Query: 158 CSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             + ++  LL IG E  V  + IWG+GGI K TIA  ++++ SR F    F  NV +  +
Sbjct: 195 AHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENVSKGYD 254

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS--------- 261
              IK LQK+LLS +   +D  + ++E+       RL  +KV +V D+V           
Sbjct: 255 ---IKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLHGLAK 311

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITTRDK +L +C  N  Y +K L   DA ++F + AFGG        +
Sbjct: 312 DPSWFGPGSRIIITTRDKGLLNSCGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDGFEQ 371

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           L  +A + A G+P AL     +L    + + WE  +  LE  P   ++E+L+ SYD LD 
Sbjct: 372 LFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRASYDGLDQ 431

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDMGR 424
             K VFL +ACF  G H   + +            A+K L+N+ +   I MH LL   GR
Sbjct: 432 YDKTVFLHVACFFNGGHLRYIRAFLKNCDARINHLAAKCLVNISIDGCISMHILLVQTGR 491

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           EIVR+ES   P K+  LW   +I+ VL  NTGT  +EG+SL + ++   + + +  F  M
Sbjct: 492 EIVRQESDWRPSKQRFLWDPTEIHYVLDSNTGTRRVEGLSLHLCEMADTLLLRNSVFGPM 551

Query: 485 PKLRFLRFY----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMP 538
             L FL+F+    G+ +   +   + V    ++ L W   PL  L        ++ L + 
Sbjct: 552 HNLTFLKFFQHLGGNVSNLQLISDDYVLSRNLKLLHWDAYPLTILPPIFRPHTIIELSLR 611

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT-TIRELP 597
            +K+  LWD  + LP                            NL  L V G+  +RELP
Sbjct: 612 YSKLNSLWDGTKLLP----------------------------NLRILDVTGSRNLRELP 643

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIR--HLSKLTFLFISHCERLQ 642
           E L     ++ LIL + ++L +IPESI   +L KL  ++   C+ L+
Sbjct: 644 E-LSTAVNLEELILESCTSLVQIPESINRLYLRKLNMMY---CDGLE 686



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
            P   E LE       ++  L E L   + +  L LS+     RIP SIR LS +  L+++
Sbjct: 912  PGRNELLELSLENCKSLVSLSEELSHFTKLTYLDLSS-LEFRRIPTSIRELSFMRTLYLN 970

Query: 637  HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
            +C ++ +L +LP +L  L A  C SLE +    SS  S  +++  + + L+   +S++V+
Sbjct: 971  NCNKIFSLTDLPESLKYLYAHGCESLEHV--NFSSNHSFNHLDFSHCISLEC--ISDLVR 1026

Query: 697  D 697
            D
Sbjct: 1027 D 1027



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 31/163 (19%)

Query: 573 LERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           +E +P+   +L+ LE L + G     LP S+G+L+ +K L LSN   L+ +P+    LS+
Sbjct: 806 IEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQ----LSQ 861

Query: 630 LTFLFISHCERLQTLPELPCNLGLLSA----------RNCTSLEKLPAGLSSMSSV---- 675
           +  L +S C +L +L      +G+L A            C SL  L   LS   S     
Sbjct: 862 VERLVLSGCVKLGSL------MGILGAGRYNLLDFCVEKCKSLGSLMGILSVEKSAPGRN 915

Query: 676 ----LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
               L +  C  L     ELS   K  ++  S  E R I  S+
Sbjct: 916 ELLELSLENCKSLVSLSEELSHFTKLTYLDLSSLEFRRIPTSI 958


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 225/685 (32%), Positives = 349/685 (50%), Gaps = 80/685 (11%)

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLI 131
            FY VDPSHVRKQ  SFG  F+   + + +K+ RW+ ALTEAA+LSG+   +   ES  I
Sbjct: 14  IFYHVDPSHVRKQEGSFGEAFAGYEENWKDKIPRWRRALTEAANLSGWHI-LDGYESNQI 72

Query: 132 EEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIA 191
           +EI N++ ++L          LVG+   ++E+   L + S  V  + I G+GGI K TIA
Sbjct: 73  KEITNNIFRQLKCKRLDVGANLVGIGSRVKEMILRLHMESSDVRIVGICGVGGIGKTTIA 132

Query: 192 GAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNR----- 246
             V+N++S  FE   F  N+ E   T G+  LQ +LL ++ +    +N+    ++     
Sbjct: 133 KVVYNELSCEFECMSFLENIGEVSNTQGLSHLQNQLLVDVLEGEVSQNMNGVAHKASMIK 192

Query: 247 --LARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKE 288
             L+ K+V +V DDV                  GSRVIITTR+K VL     +  Y +K 
Sbjct: 193 DILSSKRVLMVLDDVDHPSQLEYLLGHREWLGEGSRVIITTRNKHVLAVQKVDNLYEVKG 252

Query: 289 LVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESA 348
           L + +  +LF  +AF  +   + +  L  + + Y QG+PLALKVLG  L  ++   WES 
Sbjct: 253 LNFEEDCELFSLYAFKQNLPKSDYRNLACRVVGYCQGLPLALKVLGSLLFNKTIPEWESE 312

Query: 349 MRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------- 400
           + KL+  P  EI  VLK SYD LD ++KN+FLD+ACF +GE RD V  I D         
Sbjct: 313 LHKLDREPEAEIHNVLKRSYDGLDRTEKNIFLDVACFFKGEDRDFVSRILDGCDFHAKRG 372

Query: 401 -----SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
                 K LI L  +  IRMHDL++ MG EIVR++  + P K +RLW   D  + L    
Sbjct: 373 IRNLNDKCLITLP-YNEIRMHDLIQHMGWEIVREKFPDEPNKWSRLWDPCDFERALTAYE 431

Query: 456 GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF---------YGDKNK-------- 498
           G + +E ISLD++K ++ + ++S  F+K  +LR L+          YGD +         
Sbjct: 432 GIKRVETISLDLSK-SKGVCVSSNVFAKTTRLRLLKVHSGFHIDHKYGDLDSEEEMYYCY 490

Query: 499 CMVSHLEGV--------PFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW-- 546
            +++H   +        P  E+R+L W   PL  L  N    KLV L + C+ +++LW  
Sbjct: 491 GVIAHASKMQLDRGFKFPSYELRYLCWDGYPLDFLPSNFDGGKLVELHLHCSNIKRLWLG 550

Query: 547 -DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLS 604
             D++RL           + ++I      R+P    NLE L + G  ++ ++  S+G L 
Sbjct: 551 NKDLERLK----VIDLSYSRKLIQMSEFSRMP----NLESLFLNGCVSLIDIHPSVGNLK 602

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSL 662
            +  L L +   L+ +P+SI  L  L  L +S+C + +  P    N+  L   +   T++
Sbjct: 603 KLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAI 662

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKLD 687
           + LP  +  + S+  ++L +  K +
Sbjct: 663 KDLPDSIGDLESLEILDLSDCSKFE 687



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 55/353 (15%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++  + ++ DC   E+ P++   +++L+ L ++ T I++LP+S+G L  
Sbjct: 755  IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKS 814

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL-------------- 651
            ++ L LS+ S  E+ PE   ++ +L  L +    ++  + +LP N+              
Sbjct: 815  LEFLDLSDCSKFEKFPEKGGNMKRLRELHL----KITAIKDLPTNISRLKKLKRLVLSDC 870

Query: 652  -----GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP------NELSEIV---KD 697
                 GL+S + C +L+KL      M+  + V   +  ++D        +LS ++     
Sbjct: 871  SDLWEGLISNQLC-NLQKLNISQCKMAGQILVLPSSLEEIDAYHCTSKEDLSGLLWLCHL 929

Query: 698  GWMKHSLYEERGIK-KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
             W+K +  E +  K  ++    N IP+W R+Q+MGS  T +  P         + F    
Sbjct: 930  NWLKSTTEELKCWKLVAVIRESNGIPEWIRYQNMGSEVTTEL-PTNWYEDPHFLGFVVSC 988

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCN 816
            V         +RH     D+D     + C+      G     F GK    +S   F    
Sbjct: 989  V---------YRHIP-TSDFDYRDVDLMCELNLHGNGFE---FKGKCYRYDSPGNFKDLI 1035

Query: 817  SFGGEYFGPNYDEFSFRIHCSFHFPPYLERG---EVKKCGIHFVYAQDSADHI 866
                 ++ P         H   H      RG   E+KKCGI  ++A D  +H+
Sbjct: 1036 DQVCVWWYPKIAIRKEHHHKYTHINASF-RGHWTEIKKCGIDLIFAGDQQNHM 1087


>gi|297801406|ref|XP_002868587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314423|gb|EFH44846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 227/730 (31%), Positives = 362/730 (49%), Gaps = 88/730 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R  F SHLH+  + K I TF D ++ RG  I   L+  I  S ++I++
Sbjct: 15  YHVFPSFHGEDVRRGFLSHLHYHFASKGIMTFNDQKIERGHTIGPELVRAIRESRVSIVV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+RYASS W                      FY+VDPS VRKQ   FG  F    +  P
Sbjct: 75  LSKRYASSSWCLDELLEILKCKEDDGQIVLTIFYQVDPSDVRKQRGDFGSAFEITCQGKP 134

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW NAL   A ++G  S     E+++I++IA DV  +L+ T      G+VG+E  
Sbjct: 135 EEVKLRWSNALAHVATIAGEHSLHWPNETEMIQKIATDVSNKLNLTPLRDFDGMVGLEAH 194

Query: 160 IEEIESLLCIGSEGVCK--LRIWGIGGISKITIAGAVFNKISRHFEGSYFALN------- 210
           + ++ SLL +G +      + IWG+ GI K TIA A+FN++S  F+ + F  N       
Sbjct: 195 LTKLHSLLWLGCDDAKPKMIGIWGLAGIGKTTIARALFNRLSSSFQLNCFMDNLKGSFKS 254

Query: 211 VREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNR--LARKKVRIVFDDVT-------- 260
           V + ++      LQ +LLS++    +M+  +    +  L  ++V I+ DDV         
Sbjct: 255 VMDVDDYYSKLSLQTQLLSKILNQEDMKTYDLGAIKEWLQDQRVLIILDDVDDLEQLEAL 314

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   SGSR+I+TT D ++LK       Y +      +A ++ C+ AF    +    
Sbjct: 315 AKELSWFGSGSRIIVTTEDNKILKAHGIQDIYHVDYPSEKEALEILCRSAFKQSSVPYGF 374

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL +K   +   +PLAL V+G  L G +K  WE  + +++     +IE +LK+ YD L 
Sbjct: 375 EELANKVAAFCGKLPLALCVVGSSLHGETKYEWELQLSRIKASLDGKIETILKVGYDRLS 434

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHD-LLRDMGREIVRKES 431
           +  +++FL IACF   E     + +  A KSL+++    RI MH  LL+ +GR+IV    
Sbjct: 435 EKDQSLFLHIACFFNNE-----VVLLLADKSLVHISTDGRIVMHHYLLQKLGRQIVL--- 486

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
                +R  L    +I  VL   TGT ++ GIS D +K+ + + ++  AF  M  L+FLR
Sbjct: 487 -----ERQFLIEAAEIRDVLTNKTGTGSVIGISFDTSKIGK-VSVSKGAFEGMCNLQFLR 540

Query: 492 FY-----GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT---LNICAEKLVSLKMPCTKVE 543
            Y     G+    +   ++ +P   ++ L W   P K+   L    E+LV L MP + +E
Sbjct: 541 IYSSLFGGEGTLQIPKSMKYLP-ENLKLLHWEHYPRKSRLPLRFQPERLVELHMPHSNLE 599

Query: 544 QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT-VKGTTIRELPESL 600
                +  L S   +F +           L+ +P+     NLE LT V+ T++ ELP S+
Sbjct: 600 GGIKPLPNLKSIDLSFSS----------RLKEIPNLSNATNLETLTLVRCTSLTELPFSI 649

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             L  + +L +     L  IP +I +L+ L  + +++C +L + P++  N+  L   N T
Sbjct: 650 SNLHKLSKLKMRVCEKLRVIPTNI-NLASLEEVDMNYCSQLSSFPDISSNIKTLGVGN-T 707

Query: 661 SLEKLPAGLS 670
            +E +P  ++
Sbjct: 708 KIEDVPPSVA 717


>gi|2853078|emb|CAA16928.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268747|emb|CAB78953.1| TMV resistance protein N-like [Arabidopsis thaliana]
          Length = 1164

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 246/763 (32%), Positives = 393/763 (51%), Gaps = 82/763 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRG DTR +FTSHL   L  K I  F D +L  G+ IS  L   IE S ++I++
Sbjct: 24  FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISL-LFDRIEQSKMSIVV 82

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YA+S W                      FY+V  S V  Q+ SF   F    K F 
Sbjct: 83  FSEDYANSWWCLEEVGKIMQRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFN 142

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK-NKGLVGV 156
              +K++  K AL  A+++ GF       E   ++EI  +  + L+          L G+
Sbjct: 143 GDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI 202

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           E   +E+E LL     E V  + + G+ GI K T+A  V+ +  + F+G  F  ++ +  
Sbjct: 203 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNS 262

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQ---LNRLARKKVRIVFDDVT------------ 260
           +  G+  L +KLL +L  DG   ++ +Q    N L  KK+ IV D+VT            
Sbjct: 263 KRYGLPYLYQKLLHKLL-DGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKK 321

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR++I TRDK++L+   A+  Y +  L   +A +LFC   FG  +     ++L+
Sbjct: 322 NVYRQGSRIVIITRDKKLLQKN-ADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLS 380

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +  + YA+G+PLALK+LG  L       W+  +  L++ P  E+++ LK SY +LDD QK
Sbjct: 381 NDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALDDDQK 440

Query: 377 NVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDMG 423
           +VFLDIACF   E  D V SI  +              K L+ +  + RI MHDLL  MG
Sbjct: 441 SVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTIS-YDRIEMHDLLHAMG 499

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           +EI +++SI   G+R RLW+HKDI  +L+ NTGTE + GI L+M++V R I +   AF+ 
Sbjct: 500 KEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRR-IKLFPAAFTM 558

Query: 484 MPKLRFLRFYGD--KNKCMVSHL---EGVPF---AEVRHLEWPQCPLKTL--NICAEKLV 533
           + KL+FL+F+       C   H+     VP     E+ +L W   P   L  +   ++LV
Sbjct: 559 LSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELV 618

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTI 593
            L +  + ++QLW+D ++   SL       + ++++   L R     +NLE L ++G T 
Sbjct: 619 DLSLRYSHIKQLWED-EKNTESLRWVDLGQSKDLLNLSGLSR----AKNLERLDLEGCTS 673

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
            +L  S+ +++ +  L L + ++LE +P+  + +  L  L +S C +L+    +  ++  
Sbjct: 674 LDLLGSVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIES 732

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           L     T++E++   + S+ S++ +NL  C  LK  PN+L ++
Sbjct: 733 LHLEG-TAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKL 774



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 42/234 (17%)

Query: 522 LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDE-- 579
           LK  +I +E + SL +  T +E++ + ++ L S        I   + +C+ L+ LP++  
Sbjct: 720 LKDFHIISESIESLHLEGTAIERVVEHIESLHSL-------ILLNLKNCEKLKYLPNDLY 772

Query: 580 -LENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI-S 636
            L++L+ L + G + +  LP    ++  ++ ++L + +++++ PE    +S L+ L I S
Sbjct: 773 KLKSLQELVLSGCSALESLPPIKEKMECLE-ILLMDGTSIKQTPE----MSCLSNLKICS 827

Query: 637 HCERLQTLPELPCNLGL-LSARNCTSLEK------LPAGLSSMSSVLYVNLCNFLKLDPN 689
            C      P +  + GL L A  C SLE       +P     M +      C   KL+  
Sbjct: 828 FCR-----PVIDDSTGLYLDAHGCGSLENVSKPLTIPLVTERMHTTFIFTDC--FKLNQA 880

Query: 690 ELSEIVKDGWMKHSL-------YEERGI----KKSMYFPGNEIPKWFRHQSMGS 732
           E  +IV    +K  L       +  +G+      ++ FPG++IP WF HQ MGS
Sbjct: 881 EKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPLVAVCFPGHDIPSWFSHQKMGS 934


>gi|297836989|ref|XP_002886376.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332217|gb|EFH62635.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 260/893 (29%), Positives = 396/893 (44%), Gaps = 190/893 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF GED R  F SH+        I  F D  + RG  I+  L+  I  S I+II+
Sbjct: 15  YHVFASFHGEDVRKTFLSHIRKQFICNGITMFDDQGIKRGKTITPELIQGIRESRISIIV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VD S VRKQ+  FG  F++    + 
Sbjct: 75  LSKNYASSSWCLDELLEILKCREDIGQIVMTVFYGVDTSDVRKQTGEFGIAFNKTCAGKT 134

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ +RW  ALT+AA+++G D    + E+++IEEIAN V  +L+ T      G+VG+E  
Sbjct: 135 EEESRRWSQALTDAANIAGVDFKNCKNEAEMIEEIANHVSNQLNVTPSKDFDGMVGLEAH 194

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + E+ESLL + S GV  + I+G  GI K TIA A+ +++S  F+ + F     E+   G 
Sbjct: 195 LRELESLLDLDSVGVQMVGIYGPAGIGKSTIARALHSRLSNRFQHNCFVDIQWESFRIGF 254

Query: 219 ---GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT------------ 260
              G+K  LQ+K LS +     +R  ++ +   RL++ +V I+ DDV             
Sbjct: 255 DDYGLKLRLQEKFLSNILDLSGLRISHLGAIKERLSKLRVLIILDDVNHMKQLEALANET 314

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+I+TT +K++L     N  Y +       A K+ C++AF   +      +L 
Sbjct: 315 TWFGPGSRIIVTTENKELLHQHGINNTYHVGFPSDEKALKILCRYAFRKSYPHNGFKKLA 374

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE-IIPHVEIEEVLKISYDSLDDSQ 375
            +  +    +PLAL+V+G  L G+++E WE  + +L+ I  H +I+EVL++ Y+SL +++
Sbjct: 375 LRVTELCGNLPLALRVVGSSLRGKNEEEWEEVICRLDSIFDHQDIKEVLRVGYESLHENE 434

Query: 376 KNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHP 435
           +++FL I+ F      D V ++  A K   NLD+ Y +++                    
Sbjct: 435 QSLFLHISVFFNYRDVDLVTAML-ADK---NLDVKYGLKI-------------------- 470

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD 495
                               GT  + GIS D + +N E+ +   AF +MP LRFLR Y  
Sbjct: 471 -------------------LGTREVSGISFDTSGIN-EVIIKKGAFKRMPNLRFLRVYKS 510

Query: 496 KNKC--MVSHLEGVPFAE-VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ 550
           K+    +V   E + F   +R L+W   P K+L  N  AE LV L +   ++E+LW+  Q
Sbjct: 511 KDDGNDVVYIPEEMEFPRFLRLLDWEAYPSKSLPANFNAESLVELILSDNQLEKLWEGSQ 570

Query: 551 RLPS-------------SLCTFKTPITFEIID---CKMLERLPD---------------- 578
            LP+              L         E +D   C  L   P                 
Sbjct: 571 HLPNLKKMDLRHSYDLKQLPDLSNATNLESLDVHLCASLVEFPSYIGNLHKLEELKMGFC 630

Query: 579 ----------ELENLEYLTVKG---------------------TTIRELPESL---GRLS 604
                      L +L+YL +KG                     T + ELP S+    RL 
Sbjct: 631 INLQVVPTLVNLASLDYLDMKGCSQLKKFPDISTNIRALVIADTILEELPRSIRLWSRLQ 690

Query: 605 WVK-----RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
           ++      +  L   +++E++P+ I+ L +L  L I  C +L +LPE+P +L  L A  C
Sbjct: 691 YLSIYGSVKDPLLGRADIEKVPDWIKDLPRLQSLQIFGCPKLASLPEIPSSLKTLIANTC 750

Query: 660 TSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
            SLE L A     S V  +   N  KL       I +   +                PG 
Sbjct: 751 ESLETL-ASFPIDSQVTSLFFPNCFKLGQEARQVITQQSLLA-------------CLPGR 796

Query: 720 EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLKYFRHKS 771
            IP  F H+ +G+S T      RP  +     F  C VV   PA  ++ RH S
Sbjct: 797 TIPAEFHHRDIGNSLTF-----RPGFF----GFRICVVVSPKPAMGEHIRHYS 840


>gi|357458903|ref|XP_003599732.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|357474669|ref|XP_003607619.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355488780|gb|AES69983.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355508674|gb|AES89816.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1058

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 221/715 (30%), Positives = 365/715 (51%), Gaps = 104/715 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+DTR NFT HL                L +G++I+  LL  IE S I +++
Sbjct: 30  YDVFVSFRGKDTRLNFTDHLF--------------ALKKGESIAPELLRAIEDSQIFVVV 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQ----SHSFGRHFSRLR 96
           FS+ YASS W                      FY VDPS VR Q    + +  +H  R +
Sbjct: 76  FSKNYASSVWCLRELECILQSFQLSGKRVLPVFYDVDPSEVRYQKGCYAEALAKHEERFQ 135

Query: 97  KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
           + F E ++RW+ ALT+ A+LSG+D    +P+   IE+I  +++  L   F +  K LVG+
Sbjct: 136 QNF-EIVQRWREALTQVANLSGWDVRY-KPQHAEIEKIVEEIVNMLGYKFSNLPKNLVGM 193

Query: 157 EC------SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
                       ++SL  +   G+C     G+GG+ K T+A  ++NKIS  F       +
Sbjct: 194 HSPLHELEKHLLLDSLDDVRVVGIC-----GMGGVGKTTLATILYNKISHQFPVFCLIDD 248

Query: 211 VREAEETGGIKDLQK-----KLLSELSKDGNMRNIESQL-NRLARKKVRIVFDDVT---- 260
           + +     G+   QK      L+ E  +  N+ N  + + +RL   K  I+ D+V     
Sbjct: 249 LSKIYRDDGLIGAQKLILHQTLVEEQLQTCNIYNASNLIQSRLHCVKALIILDNVDQVEQ 308

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       +GSR+II +RD+ +LK    +  Y++  L   D+ +LF + AF  DH+
Sbjct: 309 LEKLAVNREWLGAGSRIIIISRDEHILKEYGVDVVYKVPLLNRTDSLQLFSRKAFKLDHI 368

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
            +S+ +L  + ++YA G+PLA+KVLG +L  R+   W+SA+ +L   P+ +I +VL++S+
Sbjct: 369 MSSYDKLASEILRYANGLPLAIKVLGSFLYDRNIFEWKSALARLRESPNKDIMDVLRLSF 428

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L++ +K +FL IACF +G     V ++ +               KS+I++     I +
Sbjct: 429 DGLEEMEKEIFLHIACFFKGGEEKYVKNVLNCCGFHADIGLRVLIDKSVISISTENNIEI 488

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LL+++GR+IV+++SI    K +R+W HK  Y V+ +N   + +  I    +K  R+I 
Sbjct: 489 HRLLQELGRKIVQEKSIKESRKWSRMWLHKQFYNVMSENM-EKKVGAIVFVRDKKERKIF 547

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
           + +   SKM  LR L   G     +  +L G+   E+R++EW + P K L  +    +LV
Sbjct: 548 IMAETLSKMIHLRLLILKG---VTLTGNLNGLS-DELRYVEWNRYPFKYLPSSFLPNQLV 603

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L +  + V+QLW D + LP+         T ++   K L ++P+  E+ NLE ++ +G 
Sbjct: 604 ELILRYSSVKQLWKDKKYLPNLR-------TLDLSHSKSLRKMPNFGEVPNLERVSFEGC 656

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             + ++  S+G L  +  L L +   L  IP++I  LS L  L +S C ++   P
Sbjct: 657 VKLVQMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKVFKNP 711



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 49/294 (16%)

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
            I +LP ++GRL W++RL L  N N   +P S+R LS+L +L + HC+ L++LP+LP    
Sbjct: 776  ISQLPNAIGRLRWLERLNLGGN-NFVTVP-SLRKLSRLAYLNLQHCKLLKSLPQLPFATA 833

Query: 653  LLSARNCTSLEKLPAGLSS---------------MSSVLYVNLCNFLKLDPNELSEIVKD 697
            +    +  +L+K  +  S                 +S+++  +   ++ +P   S++++ 
Sbjct: 834  IEHDLHINNLDKNKSWKSKGLVIFNCPKLGERECWNSMIFSWMIQLIRANPQSSSDVIQ- 892

Query: 698  GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGY-NKLISFAFCA 756
                            +  PG+EIP WF +QS   S ++   P       N  I  A CA
Sbjct: 893  ----------------IVTPGSEIPSWFNNQSNSRSLSIALSPVMHDDTDNNFIGIACCA 936

Query: 757  VV-VFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDH---VF 812
            V  V P    Y +  +   ++         + +R+  G +       +  V+SDH   ++
Sbjct: 937  VFSVSPTTTTYAKTPAIGINFSNR------NTRRRWYGIISVSLERYLIEVKSDHMCLIY 990

Query: 813  LGCNSFGG--EYFGPNYDEF-SFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSA 863
                SF    ++     +   +FR+  S   P  L   +V+ CG H+V  Q+ A
Sbjct: 991  FPLESFFNILKFIDETLENLDNFRMKFSIMNPKGLH-TKVQSCGYHWVNKQNHA 1043


>gi|356517284|ref|XP_003527318.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 641

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 211/594 (35%), Positives = 311/594 (52%), Gaps = 78/594 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR  FT HLH  L  K I+ F D++ L  GD I+  L   I+ S IAI 
Sbjct: 35  YDVFINFRGEDTRYEFTGHLHQALCKKGIRAFFDEEDLQTGDEITTKLEEAIKGSRIAIT 94

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASS +                       FY+VDPS VR Q  S+ +    L KR
Sbjct: 95  VFSKGYASSSFCLNELATILGCYREKTPLLVIPVFYKVDPSDVRHQRGSYEQGLDSLEKR 154

Query: 99  FPEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVG 155
               M++W+ AL E A  SG   ++    E + IE+I +DV ++++    S       VG
Sbjct: 155 LHPNMEKWRTALHEVAGFSGHHFTDGAGYEYQFIEKIVDDVFRKINEAEASIYVADHPVG 214

Query: 156 VECSIEEI-ESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++  + EI E L    S+ +  + I G+GG+ K T+A  V+N  +  F+ S F  NVRE 
Sbjct: 215 LDSLVLEIRERLEAESSDAISMIGIHGMGGVGKSTLARQVYNLHTNQFDYSCFLQNVREE 274

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQ-----LNRLARKKVRIVFDDV---------- 259
               G+K LQ  LLS++ K G     E Q      N+L  KKV +V DDV          
Sbjct: 275 SNRHGLKRLQSILLSQILKQGINLASEQQGTWMIKNQLRGKKVLLVLDDVDEHKQLQAFV 334

Query: 260 ------------TSGSRV--IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                        SG+R+  IITTRDKQ+L +    + Y +K L   DA +L  Q AF  
Sbjct: 335 GKSVWPESQSESKSGTRLVLIITTRDKQLLTSYGFKRTYEVKNLSTNDAIQLLKQKAFKT 394

Query: 306 -DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
            D +D S+ ++ +  + +  G+PLAL+V+G  L G+S + WESA+++ + IP+ EI ++L
Sbjct: 395 CDEVDQSYKQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKIL 454

Query: 365 KISYDSLDDSQKNVFLDIACFLEG----EHRDEVISIFD----------ASKSLINLDLF 410
           K+S+D+L++ +K+VFLDI C L+     E  D + S++D            KSLI +   
Sbjct: 455 KVSFDALEEEEKSVFLDITCCLKDYKCREIEDILHSLYDNCMKYHIGVLLDKSLIKIR-D 513

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD--MN 468
            ++ +HDL+ +MG+EI R++S    GKR RLW  KDI QVLK N GT  ++ I LD  ++
Sbjct: 514 DKVTLHDLIENMGKEIDRQKSPKEAGKRRRLWLQKDIIQVLKDNLGTSEVKIICLDFPIS 573

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL 522
              + I  +  A  +M  L+ L     +N  +      +P   +R LEW   P 
Sbjct: 574 DKQKTIEWDGNALKEMKNLKALII---RNGILSQAPNYLP-ESLRILEWHTHPF 623


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 244/780 (31%), Positives = 396/780 (50%), Gaps = 107/780 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
           ++DVFLSFRG DTR+N T+ L+  L  + I  F  DD+L RG  I+ +L  +I  S   I
Sbjct: 20  IFDVFLSFRGVDTRNNITNLLYEALRRQGIIVFRDDDELERGKAIANTLTNSIRQSRCTI 79

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF----SR 94
           +I S+RYA S+W                      FY++ PS V   +  F + F    + 
Sbjct: 80  VILSKRYADSKWCLRELVEIVKCKNSFNQIVLVVFYKIKPSDVNSPTGIFEKFFVDFEND 139

Query: 95  LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           +++ F E+++ W+NA+     L+ +  N  + E++ +++I       L     S ++ LV
Sbjct: 140 VKENF-EEVQDWRNAMEVVGGLTPWVVNE-QTETEEVQKIVKHAFDLLRPDLLSHDENLV 197

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+   ++++  L+ IG +    + IWG+GGI K TIA AVF  ++R F GS    NV++ 
Sbjct: 198 GMNLRLKKMNMLMGIGLDDKRFIGIWGMGGIGKTTIAKAVFKSVAREFHGSCILENVKKT 257

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR-----NIESQLNRLARKKVRIVFDDVT-------- 260
            +   G+  LQ+KLLS+    G ++      +E     L  +KV +V DDV         
Sbjct: 258 LKNVRGLVSLQEKLLSDTLMRGKVQIKDGEGVEMIKKNLGNRKVFVVLDDVDHFSQVKDL 317

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRD+ +L +   + +Y ++     +A +LFC  AFG       +
Sbjct: 318 AGGEEWFGCGSRIIITTRDEGLLLSLGIDIRYNVESFGDEEALQLFCHEAFGVKFPKKGY 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L    ++YA+G+PLA+K LG  L  R  + WE A+RKL    + ++ E LKISYD+L 
Sbjct: 378 LDLCMPFVEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKLNNSLNRQVYENLKISYDALG 437

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIF----------------------------DASKSL 404
             ++ +FL IACFL+G+ +D+VI  F                            DA K L
Sbjct: 438 KEERRIFLYIACFLKGQSKDQVIDTFVSFEIDAADGLLTRKKAADVLCIKETAADALKKL 497

Query: 405 INLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI 460
               L      +I+MH+L + +G+EI R+ES     K +RLWH +D+   L+   G EAI
Sbjct: 498 QEKSLITVVNDKIQMHNLHQKLGQEIFREES---SRKSSRLWHREDMNHALRHKQGVEAI 554

Query: 461 EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC 520
           E I+LD N+ + E H+N+  FS M  L+ LR +   N  +   LE +  +++R L W   
Sbjct: 555 ETIALDSNE-HGESHLNTKFFSAMTGLKVLRVH---NVFLSGDLEYLS-SKLRLLSWHGY 609

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
           P + L  +    +L+ L +  + +E  W + ++L       K  +   + + K L + PD
Sbjct: 610 PFRNLPSDFQPNELLELNLQNSCIENFWRETEKLD------KLKV-INLSNSKFLLKTPD 662

Query: 579 --ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
              + NLE L + G   ++EL  S+G L  +  L L +  +L+ I  +I  L  L  L +
Sbjct: 663 LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNI-SLESLKILIL 721

Query: 636 SHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
           S C RL+  PE+  N+ LL+    + T++ KL A +  ++S++ ++L  C  L   PN +
Sbjct: 722 SGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAI 781



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++P+ L  LS +  L LS N     +P S+  L  L  L + +C RL++LP+ P +L  +
Sbjct: 893 DIPDDLSCLSSLHFLDLSRNL-FTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYV 951

Query: 655 SARNCTSLEK 664
            AR+C SL++
Sbjct: 952 LARDCVSLKE 961


>gi|356514859|ref|XP_003526120.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1146

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 243/758 (32%), Positives = 366/758 (48%), Gaps = 123/758 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR++FT  L   L  + I+ F DD+ IR G++I+  L+  IE S + ++
Sbjct: 25  YDVFVSFRGEDTRNSFTGFLLQALKKEGIEAFKDDKDIRKGESIAPELIRAIEGSHVFLV 84

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           +FS+ YASS W                      FY VDPS VRKQS  + + F++ ++  
Sbjct: 85  VFSKDYASSTWCLRELAHIRNCIQTSPRHLLPIFYDVDPSQVRKQSGDYQKAFAQHQQSF 144

Query: 98  RFPEK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS-KNKGLVG 155
           RF EK +  W+  L   A+LSG+D    + +  +IEEI   +   L + F +     LVG
Sbjct: 145 RFQEKEINIWREVLELVANLSGWDIRY-KQQHAVIEEIVQQIKNILGSKFSTLPYDNLVG 203

Query: 156 VECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E    ++  L+C+G +  V  + I G+GGI K T+  A++ +IS  F    +  +V + 
Sbjct: 204 MESHFAKLSKLICLGPANDVRVVGITGMGGIGKSTLGRALYERISHQFNSLCYIDDVSKL 263

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIES---------QLNRLARKKVRIVFDDVTS---- 261
            +  G   +QK+LLS+     N RN+E             RL+  K  IV D+V      
Sbjct: 264 YQGYGTLGVQKQLLSQ---SLNERNLEICNVSDGTLLAWKRLSNAKALIVLDNVDQDKQL 320

Query: 262 -----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG 304
                            GS VII +RDKQ+LK    +  Y++K L   DA +LFC+ AF 
Sbjct: 321 DMFTGGRVDLLRKCLGRGSIVIIISRDKQILKAHGVDVIYQVKPLNDEDAARLFCRKAFK 380

Query: 305 GDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
            +++ +   ++T  A+ + QG PLA++VLG  L  +    W SA+  L +     I  VL
Sbjct: 381 SNYIVSDFEKMTGDALLHCQGHPLAIEVLGSSLFDKDVSHWRSALASLRVNKSKNIMNVL 440

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFY 411
           +IS+D L+D+ K +FLDIACF  G + + V  + D               KS I     +
Sbjct: 441 RISFDQLEDTHKEIFLDIACFFNGRYVEGVKEVLDFRGFNLEYGLQVLIDKSFITAT--F 498

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVN 471
           +I MHDLL D+G+ IVR++S   P K +RLW  KD Y+V+  N   E +E I + MN  +
Sbjct: 499 KIHMHDLLCDLGKCIVREKSPTKPRKWSRLWDFKDFYKVMSDNMPAENVEAIVVQMNH-H 557

Query: 472 REIHMNSYAFSKMPKLRFLRFYGD------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
               M     S M  L+ L+          K   M+ +L      E+ +L+W   P K L
Sbjct: 558 HGTTMGVDGLSTMSHLKLLQLESSIPDSKRKFSGMLVNLSN----ELGYLKWIFYPFKCL 613

Query: 526 --NICAEKLVSLKMPCTKVEQLWDD-----------------VQRLPSSLCTFKTPITFE 566
             +   +KLV L +  + +++LW                   ++ L    C     I   
Sbjct: 614 PPSFEPDKLVELILRHSNIKKLWKGRKKQKKAQMSYIGDSLYLETLNLQGCIQLKEIGLS 673

Query: 567 II-----------DCKMLERLPDELEN--LEYLTVKGTT-IRELPESLGRLSWVKRLILS 612
           I+           DCK L  LP   E+  L+ L ++G   +R +  S+G L  ++RL L 
Sbjct: 674 IVLSRRLSYLDLKDCKCLINLPRFGEDLILQILVLEGCQKLRHIDSSIGLLKKLRRLDLK 733

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERL---QTLPEL 647
           N  NL  +P SI  L+ L  L +S C +L   Q L EL
Sbjct: 734 NCKNLVSLPNSILGLNSLECLNLSGCSKLYNIQLLYEL 771



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 12/172 (6%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++P+++G +  +++L LS N N   +P +++ LSKL  L + HC++L++LPELP  + L 
Sbjct: 828 QIPDAIGIICCLEKLDLSGN-NFVTLP-NLKKLSKLFSLKLQHCKKLKSLPELPSRIDLP 885

Query: 655 S-ARNCTSLEKLPAGLSSMSSVLYVNLCNFL----KLDPNELSEIVKDGWMKHSLYEERG 709
           + A +C  L  +P+   +    LY+  C  L    +     LS ++    ++  L   R 
Sbjct: 886 TDAFDCFRL-MIPSYFKNEKIGLYIFNCPELVDRDRCTDMALSWMILISQVQFKLPFNRR 944

Query: 710 IKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP 761
           I+      G+EIP+WF +Q  G+  +L   P      +  I  AFC + V P
Sbjct: 945 IQSVT--TGSEIPRWFNNQHEGNCVSLDASPVMHD--HNWIGVAFCLMFVVP 992


>gi|37549278|gb|AAQ93077.1| putative TIR-NBS type R protein 11 [Malus x domestica]
          Length = 634

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 192/510 (37%), Positives = 286/510 (56%), Gaps = 65/510 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +Y+VF+SFRGEDTR NFT HLH  L+   I  FIDD+L RG++I+  L+  I+ S I+II
Sbjct: 107 LYEVFISFRGEDTRKNFTGHLHEALTKAGINAFIDDELRRGEDITTELVQAIQGSRISII 166

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS RY+ S W                      FY VDPSHVRKQ+  F + F  L+   
Sbjct: 167 VFSRRYSDSSWCLEELVKVMECRRTLGQLVLPIFYDVDPSHVRKQTGRFAQSF--LKHTD 224

Query: 100 PEKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            +K++RW+ ALTEA++LSG+D  + +   E+K I  I NDV  +L+  +       VG++
Sbjct: 225 EKKVERWRAALTEASNLSGWDLRNTLDGHEAKFIRMITNDVTTKLNNKYFDVAPYQVGID 284

Query: 158 CSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
             + +I + L IG S+ V  + I G+GGI K TIA A++N     FEG  F   VRE + 
Sbjct: 285 TRVLDISNYLGIGDSDDVRVIGISGMGGIGKTTIAQAIYNIFYERFEGKSFLEKVREKK- 343

Query: 217 TGGIKDLQKKLLSEL--------SKDGNMRNIESQLNRL----------ARKKVRIVFDD 258
              ++ LQK+LL ++        S       +  +  RL            K++R +  +
Sbjct: 344 ---LEKLQKQLLFDILQTKTKVSSVVAGTALVRERFRRLKVLVIVDDVDDVKQLRELVGN 400

Query: 259 ---VTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTR+++VLK    +K YR K +   +A +L    AF      + ++ L
Sbjct: 401 CHFFGPGSRIIITTRNERVLKEFAVDKIYRAKVMDREEALELLSWHAFRSSSCPSQYLAL 460

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS- 374
             + + Y  G+PLAL+VLG  L  RS + W S + +L++IP  EI+  LKISYD L+D+ 
Sbjct: 461 EREVVNYCGGLPLALEVLGSTLFKRSVDEWRSILDELKMIPRGEIQAQLKISYDGLNDNY 520

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           ++ +FLDIACF  G  +++V+ I D              ++ L+ ++   +I MHDLLRD
Sbjct: 521 KRRIFLDIACFFIGMDKNDVVQILDGCGFYSTTGIEVLLNRCLVTINRENKIMMHDLLRD 580

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVL 451
           MGR+IV  E+ + PG+R+RLWH +D+  VL
Sbjct: 581 MGRDIVHAENPDFPGERSRLWHPEDVNDVL 610


>gi|227438127|gb|ACP30553.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1290

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 261/835 (31%), Positives = 380/835 (45%), Gaps = 146/835 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R +F SHL   L  KSI TFID  + R   I   LL  I  S I+ I+
Sbjct: 10  YDVFPSFSGEDVRKSFLSHLLKELDRKSIITFIDHGIKRSRPIGPELLSAIRESRISDIV 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY VDPS VRKQ+  FG+ F    K   
Sbjct: 70  FSKSYASSSWCLNELVEIHKCYMEVDQTVIPIFYGVDPSDVRKQTGEFGKAFGETSKGTT 129

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  AL E A+++G D      E+ LI++IA++V  +L  T  +     VGVE  
Sbjct: 130 EDEKQRWMRALAEVANMAGEDLQNWCNEANLIDKIADNVSNKL-ITPSNYFGDFVGVEAH 188

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E +  LLCI SE    + I G  GI K TIA A+F+++S  F    F    R  ++  G
Sbjct: 189 LEAMNQLLCIESEEARMVGIVGPSGIGKTTIARALFSQLSSRFHYRAFLAYRRTIQDDYG 248

Query: 220 IKDL-QKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT---------------- 260
           +K   +++ LSE+   K+  +  +     RL  KKV I  DDV                 
Sbjct: 249 MKLCWEERFLSEILCQKELKICYLGVVKQRLKLKKVLIFLDDVDDVELLKTLVGRTKWFG 308

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
           SGSR+I+ ++D+Q+LK    +  Y+++      A K+ C+ AFG +      +EL  +  
Sbjct: 309 SGSRIIVISQDRQLLKAHDIDLVYKVEFPSEDVALKMLCRSAFGQNSPPNGFMELAVEVA 368

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
           K A  +PL L VLG  L GR K+ W   M +L      ++E+ L++SYD LD   + +FL
Sbjct: 369 KLAGNLPLGLNVLGSSLRGRGKDEWMKMMPRLRNYLDGKVEKTLRVSYDRLDGKDQELFL 428

Query: 381 DIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
            IA F    +  +V  I D             A KSLI +     I MH+LL  + REI 
Sbjct: 429 FIA-FARLFNGVQVSYIKDLLGDSVNTGLKTLADKSLIRITSNETIEMHNLLHKLAREIF 487

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           R ESIN+PGKR  L   +DI  V    TGTE + G+  +  K+     M+  +F  M  L
Sbjct: 488 RAESINNPGKRRFLVDVEDIRDVFTDKTGTETVLGLYFNALKLEEPFSMDEKSFEGMCNL 547

Query: 488 RFL------RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPC 539
           +FL       ++  + K  +         ++R L W   P K L  N  AE LV L+M  
Sbjct: 548 QFLIVRDYVGYWVPQGKLHLPQGLFYLPRKLRLLRWDGYPSKCLPSNFKAEYLVELRMKN 607

Query: 540 TKVEQLWDD-----------------VQRLP----------------SSLCTFKTPIT-- 564
           + +E+LW+                  ++ LP                +SL TF + I   
Sbjct: 608 SSLEKLWEGTLPLGRLKKLIMSWSTYLKELPDLSNAKSLEEVYLDRCTSLVTFPSSIQNL 667

Query: 565 -----FEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPE------------------ 598
                 ++  C  LE  P    L++LEYL ++  + +R  P+                  
Sbjct: 668 HKLRELDLEGCTELESFPTLINLKSLEYLNLRECSRLRNFPQIYINSSQGFSLEVEGCFW 727

Query: 599 -----SLGRLSWVKRLI-----------LSNNSN-LERIPESIRHLSKLTFLFISHCERL 641
                 L  L  + R I           L+  SN LER+ E ++ L  L  + +S CE L
Sbjct: 728 NNNLCGLDYLGCIMRCIPCKFRPEQLIGLTVKSNMLERLWEGVQCLGSLEMMDVSSCENL 787

Query: 642 QTLPELPC--NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
             +P+L    NL  L   NC SL  +P+ + S+  ++ + +  C  L++ P +++
Sbjct: 788 TEIPDLSMAPNLMYLRLNNCKSLVTVPSTIGSLCKLVGLEMKECTMLEVLPTDVN 842



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 90/308 (29%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLE 584
            E+L+ L +    +E+LW+ VQ L S           E++D   C+ L  +PD     NL 
Sbjct: 751  EQLIGLTVKSNMLERLWEGVQCLGS----------LEMMDVSSCENLTEIPDLSMAPNLM 800

Query: 585  YLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            YL +    ++  +P ++G L  +  L +   + LE +P  + +LS L  L++S C RL++
Sbjct: 801  YLRLNNCKSLVTVPSTIGSLCKLVGLEMKECTMLEVLPTDV-NLSSLRTLYLSGCSRLRS 859

Query: 644  LPELPCNLGLLSARNCTSLEKLPAGLSSM--SSVLYVNLC--------NFLKL------- 686
             P++  ++  L   N T++E++P  + +    S L ++ C        NF +L       
Sbjct: 860  FPQISRSIASLYL-NDTAIEEVPCCIENFWRLSELSMSGCKRLKNISPNFFRLRSLHLVD 918

Query: 687  --DPNELSEIVKDGWMKHSL--------------YEER----------GIKKSMYF---- 716
              D  E+  ++ D  +K  +               EER          G+ ++  F    
Sbjct: 919  FSDCGEVITVLSDASIKAKMSIEDHFSLIPLFENTEERYKDGADIDWAGVSRNFEFLNFN 978

Query: 717  -----------------------PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
                                   PG E+P +F H++ G+S  L    P+ +     + F 
Sbjct: 979  NCFKLDRDARELIIRSYMKPTVLPGGEVPTYFTHRASGNS--LAVTLPQSSLSQDFLGFK 1036

Query: 754  FCAVVVFP 761
             C  V  P
Sbjct: 1037 ACIAVEPP 1044


>gi|5302806|emb|CAB46047.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268445|emb|CAB80965.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1103

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 255/825 (30%), Positives = 382/825 (46%), Gaps = 138/825 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  +SI TF+D  ++R   I+  L+  I  + I+I+I
Sbjct: 6   YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELITAIREARISIVI 65

Query: 62  FSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           FSE YASS W                        FY VDPSHVRKQ   FG  F +  + 
Sbjct: 66  FSENYASSTWCLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCED 125

Query: 99  FPEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            PE  K RW  ALT+ ++L+G D      E+ ++ +IANDV  +L          LVG+E
Sbjct: 126 KPEDQKQRWVKALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKL-FPLPKGFGDLVGIE 184

Query: 158 CSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAE 215
             IE I+  LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         
Sbjct: 185 DHIEAIKLKLCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGS 244

Query: 216 ETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------------ 260
           +  G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV             
Sbjct: 245 DVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKA 304

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
               SGSR+I+ T+D+Q+LK    +  Y +K      A K+ CQ+AFG         EL 
Sbjct: 305 EWFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELA 364

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            +  K A  +PL L VLG  L  RSKE W   + +L+   + +I + L++SY  LD   +
Sbjct: 365 FEVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQ 424

Query: 377 NVFLDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRMHDLLRD 421
           ++F  IA    G    +V SI D                 KSLI L     I MH+LL+ 
Sbjct: 425 DIFHYIAWLFNGW---KVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQK 481

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM---NKVNRE-IHMN 477
           +  EI R+ES  +PGKR  L + ++I  V   NTGTE + GI       +++++  I ++
Sbjct: 482 LATEIDREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIDFSTSSDSQIDKPFISID 541

Query: 478 SYAFSKMPKLRFLR----FYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICA 529
             +F  M  L+FL     ++    +  +    G+ +   +++ L W  CPLK L  N  A
Sbjct: 542 ENSFQGMLNLQFLNIHDHYWWQPRETRLRLPNGLVYLPRKLKWLRWENCPLKRLPSNFKA 601

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKML 573
           E LV L+M  + +E+LW+  Q L S                 L         ++ +C++L
Sbjct: 602 EYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVL 661

Query: 574 ERLPDEL--ENLEYLT-VKGTTIRELPE-------------------------------- 598
           E  P  L  E+L++L  +    +R  PE                                
Sbjct: 662 ESFPSPLNSESLKFLNLLLCPRLRNFPEIIMQSFIFTDEIEIEVADCLWNKNLPGLDYLD 721

Query: 599 -------SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PC 649
                  S  R   +K L +  N+ LE++ E ++ L KL  + +S CE +  +P+L    
Sbjct: 722 CLRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMIEIPDLSKAT 781

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           NL +L   NC SL  LP+ + ++  +  +N+  C  LK+ P +++
Sbjct: 782 NLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDIN 826


>gi|297800420|ref|XP_002868094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313930|gb|EFH44353.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1247

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 253/805 (31%), Positives = 379/805 (47%), Gaps = 122/805 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF GED R  F SHL   L  KSI TF+D  + R   I+  L+  I  + I+I+I
Sbjct: 13  YDVFPSFSGEDVRKTFLSHLLKALDGKSINTFMDHGIERSRTIAPELISAIREARISIVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY +DPS VRKQ   FG  F +  +  P
Sbjct: 73  FSKNYASSTWCLNELVEIHKCCKDLDQMVIPVFYYIDPSEVRKQIGEFGDVFKKTCEDKP 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVEC 158
           E  K RW  ALT+ ++++G D      E+ ++E+I NDV  +L      K  G  VG+E 
Sbjct: 133 EDQKQRWVQALTDISNIAGEDLRNGPDEAHMVEKIVNDVSNKLLPP--PKGFGDFVGIED 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            IEEI+S+LC+ S+    + IWG  GI K TI  A+F+++S  F    F      + +  
Sbjct: 191 HIEEIKSILCLESKVARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFVTYKSTSGDVS 250

Query: 219 GIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS-------------- 261
           G+K   +K+LLS++   KD NM +      RL  KKV I+ DDV +              
Sbjct: 251 GMKLSWEKELLSKILGQKDINMEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKTEWF 310

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSR+I+ T+D+Q+LK    +  Y +K      A K+ C+ AFG D       EL  + 
Sbjct: 311 GPGSRMIVITQDRQLLKAHDIDLLYEVKLPSQGLALKMLCRSAFGKDSPPDDLKELAVEV 370

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
            K    +PL L +LG  L GR K+ W   M +L    + +I + L++SYD LD   +++F
Sbjct: 371 AKLTGNLPLGLSILGSSLKGRDKDEWMEMMPRLRNGLNGDIMKTLRVSYDRLDKEDQDMF 430

Query: 380 LDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKES 431
           L IAC   G          +D V       KSL+ +     I MH+LL  +GREI R E 
Sbjct: 431 LHIACLFNGFRVSSVDDLCKDNVGLTTLVDKSLMRITPKGYIEMHNLLEKLGREIDRAEC 490

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN-KVNREIHMNSYAFSKMPKLRFL 490
             +  KR  L + +DI +VL + TGT+   GI L  +    R + ++  +F  M  L++L
Sbjct: 491 NGNLRKRRFLTNFEDIEEVLTEKTGTKTAVGIRLYTDYGEKRLLSIDEKSFKGMDNLQYL 550

Query: 491 RFYG-DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD 547
             +    N  +   L  +P+ ++R LEW   PLK+L     A+ LV L M  +K+E+LW+
Sbjct: 551 SVFNCSINIKLPRGLFFLPY-KLRLLEWENFPLKSLPSTFKAKYLVELIMVDSKLEKLWE 609

Query: 548 DVQRL----PSSLCTFK---------TPITFEIID---CKMLERLPDELE---------- 581
             Q L      ++C  K           I  E +D   C  L  LP  ++          
Sbjct: 610 GTQPLGRLKKMNMCGSKYLKEIPDLSKAINLEKLDLYGCSSLVTLPSSIQNAIKLRKLNC 669

Query: 582 ---------------NLEYLTVKGTTIRELPES-------LGRLSWVK---RLILSN--- 613
                          NL+YL+V   +  +LP+        L  L W +   + + SN   
Sbjct: 670 SGELLIDSKPLEGMRNLQYLSVLNWSNMDLPQGIVHFPHKLISLRWYEFPLKCLPSNFKA 729

Query: 614 ---------NSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSL 662
                    NS LE++ E  + L  L  + +S+ + L+ +P+L    NL  +    C+SL
Sbjct: 730 EYLVELIMVNSKLEKLWERNQPLGSLKTMNLSNSKYLKEIPDLSNAINLEEVELSGCSSL 789

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKLD 687
             LP+ + +   + Y+++    KL+
Sbjct: 790 VALPSSIQNAIKLNYLDMSECRKLE 814



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 33/199 (16%)

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           E+ ++S     M  L++L      N  +   +   P   +  L W + PLK L  N  AE
Sbjct: 672 ELLIDSKPLEGMRNLQYLSVLNWSNMDLPQGIVHFPHKLI-SLRWYEFPLKCLPSNFKAE 730

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
            LV L M  +K+E+LW+  Q L S         T  + + K L+ +PD            
Sbjct: 731 YLVELIMVNSKLEKLWERNQPLGSL-------KTMNLSNSKYLKEIPD------------ 771

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
                    L     ++ + LS  S+L  +P SI++  KL +L +S C +L++ P     
Sbjct: 772 ---------LSNAINLEEVELSGCSSLVALPSSIQNAIKLNYLDMSECRKLESFPTHLNL 822

Query: 650 -NLGLLSARNCTSLEKLPA 667
            +L  L    C +L   PA
Sbjct: 823 KSLEYLDLTGCLNLRNFPA 841



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 39/154 (25%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPS------SLCTFKTPIT----------FEIIDCKML 573
            E LVSL +   K+E+LW+ VQ L S      S C   T I           F +  CK L
Sbjct: 889  EYLVSLDVRGNKLEKLWEGVQSLGSLEWMNLSECENLTEIPDLSKATNLKRFYLNGCKSL 948

Query: 574  ERLPDELENLEYL---TVKGTTIRE-LP-------------------ESLGRLSWVKRLI 610
              LP  +ENL+ L    +KG T  E LP                    S   +SW  + +
Sbjct: 949  VTLPSTIENLQNLLGLEMKGCTRLEVLPTDVNLSSLDILDLSGCSSLRSFPLISWNIKWL 1008

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
              +N+ +  +P  I + S+LT L +  C+ L+ +
Sbjct: 1009 YLDNTAIVEVPCCIENFSRLTVLMMYCCQSLKNI 1042


>gi|297794589|ref|XP_002865179.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311014|gb|EFH41438.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1113

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 234/750 (31%), Positives = 369/750 (49%), Gaps = 95/750 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D R NF +H    L  K I+TF D ++ +G+++   L   I  S IA+++
Sbjct: 7   YDVFISFRGDDLRHNFLAHFRKELDRKLIRTFNDMEIEKGESLDPVLTQAIRGSKIAVVL 66

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      F+ VDPSHVR Q   FG  F +  +R  
Sbjct: 67  FSKNYASSGWCLNELLEIVKCKKEIGQLVIPIFHGVDPSHVRHQIGDFGSIFEKTCRRHS 126

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K +WK ALTE A++ G        E+K IE I ND+L  +  T     +  VG+E  
Sbjct: 127 EEVKNQWKKALTEVANMVGTHLQNWDNEAKQIEYIVNDLLGTVILTPSKDFEDTVGIEDH 186

Query: 160 IEEIESLLCIG--SEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-----GSYFALNVR 212
           I +I  +L +   S+ V ++ IWG  GI K TIA A++++ S  F+       +F     
Sbjct: 187 IAKISLILDLKFESKEVRRVGIWGPSGIGKTTIARALYSQHSHVFDVCVFLDIHFVSKST 246

Query: 213 EAEETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--- 261
           +    G   D      LQK  LS++   KD  + ++     RL  +KV IV DD+     
Sbjct: 247 KNYRKGNPDDYNMKLCLQKSFLSKILDQKDIEVEHLGVIEERLKHQKVLIVLDDLDDQMV 306

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+I+ T+DK++L+    N  Y +       A ++FC  AFG    
Sbjct: 307 LDTLVGKDEWFGCGSRIIVITKDKRLLEAHGINHIYEVGFPSEKQALEMFCHSAFGQKSP 366

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D   +EL  +    A G+PL LK+LG  +  R  E W+  +  L+   + +I + LK+SY
Sbjct: 367 DDGFVELATEVAARAGGLPLGLKILGKVMKNRKVEEWKGELLSLQKNQNGDIGKTLKVSY 426

Query: 369 DSLD-DSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYR---- 412
           D +D    + +F  IACF  G   D +  +               KSLI+    +     
Sbjct: 427 DKIDIQKHRAIFRHIACFFNGAEIDNIKLMLPELDVETGVRHLVEKSLISSKSSWNNTCT 486

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNR 472
           + MH L+++MG+++VR +S   PG+R  L+   D+  VL    GT  + GISLD+N+++ 
Sbjct: 487 VDMHCLVQEMGKQLVRAQS-EEPGEREFLFDSDDVCNVLGGTNGTNKVIGISLDLNEID- 544

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNK-------CMVSHLEGVPFAEVRHLEWPQCPLKTL 525
           E+ ++  AF  M  LRFLRF+ +  +        +   ++  P  +++ L WP  P+K L
Sbjct: 545 ELEIHKKAFKNMHNLRFLRFHINSWEREKEVEWNLPKKIDAFP-PKLKLLNWPGYPMKQL 603

Query: 526 --NICAEKLVSLKMPCTKV-EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--EL 580
                 +KLV L+MP +K+ E+LW+  + L       K     ++     L+ +PD  + 
Sbjct: 604 PAEFRPDKLVELRMPNSKILEKLWEGDKSL-------KFLKDMDLSGSLNLKEIPDLSKA 656

Query: 581 ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            NLE L + G +++ ELP S+  L+ +  L ++  +NLE +P     L  L  L ++ C 
Sbjct: 657 TNLETLNLNGCSSLVELPSSILNLNKLTDLNMAGCTNLEALPTG--KLESLIHLNLAGCS 714

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGL 669
           RL+  P++   +  L   N T+ E  P+ L
Sbjct: 715 RLKIFPDISNKISELII-NKTAFEIFPSQL 743



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 50/268 (18%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E LV L +  T  E+LW+ VQ L ++L T K      ++  + L+ LP+     +LE L 
Sbjct: 746  ENLVELSLEHTMSERLWEGVQPL-TNLKTIK------LLGSENLKELPNLSMATSLETLN 798

Query: 588  VKG-TTIRELP-ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +   +++ EL   ++  L+ +  L +   S+LE +P  I +L  L  L ++ C +L+  P
Sbjct: 799  LNNCSSLVELTLSTIQNLNKLTSLDMIGCSSLETLPIGI-NLKSLYRLNLNGCSQLRGFP 857

Query: 646  ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLK-----------LDPNELS 692
            ++  N+  L   N T++E++P+ +++ SS+  + +  C  LK           LD    S
Sbjct: 858  DISNNITFLFL-NQTAIEEVPSHINNFSSLEALEMMGCKELKWISPGLFELKDLDEVFFS 916

Query: 693  EIVKDG----------------------WMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM 730
            +  K G                      ++   ++  +     M  PG E+P +F H+S 
Sbjct: 917  DCKKLGEVKWSEKAEDTKLSVISFTNCFYINQEIFIHQSASNYMILPG-EVPPYFTHRST 975

Query: 731  GSSATLKTRPPRPAGYNKLISFAFCAVV 758
            G+S T+             + F  C VV
Sbjct: 976  GNSLTIPLH-HSSLSQQPFLDFKACVVV 1002


>gi|121544148|gb|ABM55688.1| TIR-NBS class disease resistance protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa]
          Length = 509

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 189/498 (37%), Positives = 274/498 (55%), Gaps = 66/498 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I+TF+DD +L RG+ IS+ LL  I  S I+I+
Sbjct: 15  YDVFLSFRGEDTRKTFTGHLYAALDDAGIRTFLDDNELPRGEEISEHLLKAIRESKISIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+  F   F +  + 
Sbjct: 75  VFSKGYASSRWCLNELVEILKCKRKKTGQIVLPIFYDIDPSDVRKQTGCFAEAFDKHEEC 134

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL +A +LSG++ N +    E+K I+ I  DV+ +L+  +    + LVG
Sbjct: 135 FEEKLVKEWRKALEDAGNLSGWNLNDMANGHEAKSIKGIIKDVVNKLEPKYLYVPEHLVG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++ +  +I   L   ++ V  + I G+ GI K T+A  VFN++   FEGS F  ++ E +
Sbjct: 195 MDLA-HDIYDFLSTATDDVRIVGIHGMSGIGKTTLAKVVFNQLCNGFEGSCFLSDINETS 253

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++ K    N   ++        R+ RK+V +V DDV         
Sbjct: 254 KQFNGLAGLQKQLLRDILKQDVANFDCVDRGKVLIKERIRRKRVLVVADDVAHPEQLNAL 313

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  +L+   A++ Y++KEL   ++ +LF + AF        +
Sbjct: 314 MGERSWFGPGSRVIITTRDSNLLRE--ADQTYQIKELKPGESLQLFSRHAFKDSKPAKDY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+ KA+ Y  G+PLAL+V+G  L  +++  WE  +  L  IP+ +I+  L ISYD+LD
Sbjct: 372 IELSKKAVDYCGGLPLALQVIGALLYRKNRGEWEREIDNLSRIPNQDIQGKLLISYDALD 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFYRIRMHDL 418
              +  FLDIACF  G  R+ V  +                + +SLI  + F +I MHDL
Sbjct: 432 GELQRAFLDIACFFIGIEREYVAKVLGVRCRPNPEVVLETLSERSLIQFNAFGKITMHDL 491

Query: 419 LRDMGREIVRKESINHPG 436
           LRDMGREIVR+ S   PG
Sbjct: 492 LRDMGREIVRESSPKEPG 509


>gi|359493289|ref|XP_003634561.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
          Length = 944

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 256/876 (29%), Positives = 401/876 (45%), Gaps = 161/876 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L  K I+TF D ++L RG+ I   LL  I  S I II
Sbjct: 18  YDVFLSFRGEDTRTGFTDHLYAALVDKGIRTFRDSEELRRGEEIEGELLKAIHESRIFII 77

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLR---K 97
           IFSE YA+S+W                     FY VDPS VR QS  +G  F+       
Sbjct: 78  IFSEDYANSKWCLKELAEISKCKAKGRKVFPVFYHVDPSEVRNQSGYYGEAFAAYENDAN 137

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
           +  E+++ W+ AL EA  + G+  +   PE+ +++ I  D++  +         GLV  +
Sbjct: 138 QDSERIQVWRTALKEAGHIIGYHIDK-EPEADVVKTITRDMICEIIGK-DCVEDGLVDKK 195

Query: 158 CSIEEIESLLCIG-----------SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSY 206
             +++++ L+              S  V  + I+G  GI K TIA A++++IS  F+G+ 
Sbjct: 196 SRLKKLKELIWKSEDVSMDGIRRKSRDVLMVGIFGSAGIGKTTIARALYDEISCQFDGAS 255

Query: 207 FALNVREAEETGGIKDLQKKLLSELSKDGN----MRNIESQLNRLARKKVRIVFDDVTS- 261
           F  N+RE  +  G+  LQ++L  ++   G     +R      ++   KKV IV DDV   
Sbjct: 256 FLANIREVSKKDGLCCLQERLFCDILLGGRKVMLLRRDNLMESKFCTKKVLIVLDDVNDK 315

Query: 262 ---------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                          GSR+IIT R++ +L     ++ Y  K+L   +A  L C  A   +
Sbjct: 316 KQLELLAGRHDWFGKGSRIIITCRNEHLLLRHKVDESYEFKKLDGLEALALLCHHALTEE 375

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
                     D      +  PL LKV G YL G+    WE  +            + LK+
Sbjct: 376 QSPFKRFLFLDNIRARCENNPLKLKVAGSYLRGKEDANWEIYVN----------SKFLKV 425

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD--------ASKSLINLDLFY----RIR 414
           SY+ L + +K++FLD+ACF +GE  D V  I +          + L N  L      ++ 
Sbjct: 426 SYEDLLEEEKDIFLDVACFFQGECEDFVTKILEKPDFSAKQGVQVLSNRCLLTISEGKLW 485

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA-IEGISLDMNKVNRE 473
           M + +++M  +I  K++   PGK  RLW H  I  VLK+N G  A IEGISL+++K +++
Sbjct: 486 MDNSIQEMAWKIANKQA-QIPGKPCRLWDHNKILHVLKRNEGIHALIEGISLELSK-SKD 543

Query: 474 IHMNSYAFSKMPKLRFLRFY------GDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKT 524
              +  AFS+M  LR L+ +       DK    V       F    ++R+L      L +
Sbjct: 544 KKFSGEAFSEMDALRLLKVFLGSGCVNDKETYKVHFSTDFTFPSYDKLRYLHGHGYQLDS 603

Query: 525 L--NICAEKLVSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEII- 568
              N  AE+L+ L MPC+ ++Q+  D    P+             ++  F      E + 
Sbjct: 604 FPSNFEAEELLELNMPCSSLKQIKGDEIHFPNLIALDLSHSQQLETISNFSRMPNLERLV 663

Query: 569 --DCKMLERLPDELENLEYLT---VKGTT-IRELPESLGRLSWVKRLILSNNSNLERI-- 620
              C+ L ++   + NL+ L+   +KG   ++ LP+ + +  +++ LIL+  S LE++  
Sbjct: 664 LEGCRSLVKVDPSIVNLKKLSLMNLKGCKRLKSLPKRICKFKFLETLILTGCSRLEKLLG 723

Query: 621 -------------PESIRHL----SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
                          + R +      L  L + HC+R Q + +LP ++  + A NC S+ 
Sbjct: 724 DREERQNSVNLKASRTYRRVIILPPALRILHLGHCKRFQEILKLPSSIQEVDAYNCISM- 782

Query: 664 KLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPK 723
               G  S ++ L  ++   +K++P     IV                     PGN IP 
Sbjct: 783 ----GTLSWNTRLEASILQRIKINPESAFSIV--------------------LPGNTIPD 818

Query: 724 -WFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAV 757
            W  H+  GSS T+K +   P  YN  L+ FA C V
Sbjct: 819 CWVTHKVTGSSVTMKLK--NPDRYNDDLLGFAVCLV 852


>gi|42573596|ref|NP_974894.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177586|dbj|BAB10817.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008007|gb|AED95390.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 858

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 248/770 (32%), Positives = 362/770 (47%), Gaps = 121/770 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRG D R  F SH       K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  LYDVFLSFRGGDVRVTFRSHFLKEFDRKLITAFRDNEIERSHSLWPDLEQAIKDSRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPS VR Q   FGR F +  KR  E+
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIIIPVFYGVDPSQVRYQIGDFGRIFEKTCKRQTEE 130

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           +K +WK ALT  A++ GFDS     E+K+IEEIANDVL++L  T        VG+E  I 
Sbjct: 131 VKNQWKKALTLVANMLGFDSAKWDDEAKMIEEIANDVLRKLLLTTSKDFDDFVGLEDHIA 190

Query: 162 EIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-----GSYFALNVREAEE 216
            + +LL + S+ V  + IWG  GI K TIA A+FN + RHF+        FA   RE   
Sbjct: 191 NMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNLFRHFQVRKFIDRSFAYKSREIHS 250

Query: 217 TGGIKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKV---------RIVFDDV 259
           +    D      LQ+  LSE+ +  N++  +  +   RL  +KV          +V D +
Sbjct: 251 SANPDDHNMKLHLQESFLSEILRMPNIKIDDPTALEERLKYQKVLIIIDDLDDIMVLDTL 310

Query: 260 TS-------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+I+ T DK  L     +  Y +       A ++ CQ AF  ++     
Sbjct: 311 VGQTQWFGYGSRIIVVTNDKHFLTAHGIDHIYEVSFPTDVHACQMLCQSAFKQNYAPEGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--------IEEVL 364
            +L    +++A   PL L +LG YL GR++E W      ++I+P +E        IE++L
Sbjct: 371 GDLVVDVVRHACSFPLGLNLLGKYLRGRNEEYW------MDILPRLENGLRLDGKIEKIL 424

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-----------ASKSLINLDLFYRI 413
           +ISYD LD   + +F  IAC         + S+             A KSLI++   Y +
Sbjct: 425 RISYDGLDSEDQEIFRHIACIFIHMKVTTIKSLLAESDVSFALENLADKSLIHVRQGY-V 483

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MH  L++MGR+IVR +SI++PG+R  L    DI+ VL   TGT+ + GISL+   +  E
Sbjct: 484 VMHRSLQEMGRKIVRIQSIDNPGEREFLVDPNDIHDVLNACTGTQKVLGISLNTRNI-VE 542

Query: 474 IHMNSYAFSKMPKLRFLR---FYGDKNKCMVSHLEGVPFAEVRHLEWPQ----------C 520
           + ++  A   M  LRFL    F     K ++  +  + F      EW +           
Sbjct: 543 LDVHESAIKGMSNLRFLEIKDFISQWKKALID-VSKIAFDST---EWNRGLITQNYVNLL 598

Query: 521 PLKTLNICAEKLVSLK-------MPCTKVEQLWDDVQRLPSS----------LCTFKTPI 563
            L T     E+LV ++       +P TK     DD   LP+S          LC  K P+
Sbjct: 599 LLSTTPKEYEELVGIEDHTAEMSLPATKSFDFEDDGLHLPASFDYLPPTLKLLCWPKFPM 658

Query: 564 TFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                 C   +  P   ENL  L ++ + + +L E +  L+ +K + L  + NL+ IP+ 
Sbjct: 659 R-----CMPYDFCP---ENLVKLEMRESKLYKLWEGVVPLTCLKEMDLDGSVNLKEIPD- 709

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLS 670
           +   + L  L   +C+ L  LP    NL  L   N   C SLE LP G +
Sbjct: 710 LSMATNLETLNFENCKSLVELPSFIRNLNKLLKLNMAFCNSLETLPTGFN 759



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 89/169 (52%), Gaps = 26/169 (15%)

Query: 512 VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT----F 565
           ++ L WP+ P++ +  + C E LV L+M  +K+ +LW+ V            P+T     
Sbjct: 648 LKLLCWPKFPMRCMPYDFCPENLVKLEMRESKLYKLWEGV-----------VPLTCLKEM 696

Query: 566 EIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE 622
           ++     L+ +PD     NLE L  +   ++ ELP  +  L+ + +L ++  ++LE +P 
Sbjct: 697 DLDGSVNLKEIPDLSMATNLETLNFENCKSLVELPSFIRNLNKLLKLNMAFCNSLETLPT 756

Query: 623 --SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGL 669
             +++ L +L+F   S C +L+T P+   N+ +L+    T++E+ P+ L
Sbjct: 757 GFNLKSLDRLSF---SECTKLKTFPKFSTNISVLNLFG-TNIEEYPSHL 801


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 242/781 (30%), Positives = 396/781 (50%), Gaps = 109/781 (13%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAI 59
           ++DVFLSFRG DTR N T+ L+  L  + I  F  DD+L RG  I+ +L  +I  S   I
Sbjct: 19  IFDVFLSFRGVDTRKNVTNRLYEALRRQGIIVFRDDDELERGKTIANTLTNSINQSRCTI 78

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF----SR 94
           +I S+RYA S+W                      FY++ PS V   +  F + F    + 
Sbjct: 79  VILSKRYADSKWCLRELVEIVKCKNTFKQLVLVVFYKIKPSDVNSPTGIFEKFFVDFEND 138

Query: 95  LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           +++ F E+++ W+ A+     L  +  N  + E++ +++I       L     S ++ LV
Sbjct: 139 VKENF-EEVQDWRKAMEVVGGLPPWPVNE-QTETEKVQKIVKHACDLLRPDLLSHDENLV 196

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+   ++++  L+ IG +    + IWG+GGI K TIA AVF  ++R F GS    NV++ 
Sbjct: 197 GMNLRLKKMNMLMGIGLDDKRFIGIWGMGGIGKTTIAKAVFKSVAREFHGSCILENVKKT 256

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR-----NIESQLNRLARKKVRIVFDDVT-------- 260
            +  GG+  LQ+KLLS+    G ++      +E     L  +KV +V D V         
Sbjct: 257 LKNVGGLVSLQEKLLSDTLMRGKVQIKDGDGVEMIKKNLGNQKVFVVLDGVDHFSQVKDL 316

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRD+ +L +   + +Y ++     +A +LFC  AFG       +
Sbjct: 317 AGGEEWFGCGSRIIITTRDEGLLLSLGVDIRYNVESFDDEEALQLFCHEAFGVKFPKKGY 376

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L    I+YA+G+PLA+K LG  L  R  + WE A+RKL    + ++ E LKISYD+L 
Sbjct: 377 LDLCMPFIEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKLNNSLNRQVYENLKISYDALG 436

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIF-----DAS-------------------------- 401
             ++ +FL IACFL+G+++D+VI  F     DA+                          
Sbjct: 437 KEERRIFLYIACFLKGQNKDQVIDTFVSFEIDAADGLLTRKNAADVLCIKETAADALKKL 496

Query: 402 --KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA 459
             KSLI + L+ +I MH+L + +G+EI  +ES     K +RLWH +D+   L+   G EA
Sbjct: 497 QEKSLITM-LYDKIEMHNLHQKLGQEIFHEES---SRKGSRLWHREDMNHALRHKQGVEA 552

Query: 460 IEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQ 519
           IE I LD +K + E H+N+  FS M  L+ LR +      ++ +L      ++R L W  
Sbjct: 553 IETIVLD-SKEHGESHLNAKFFSAMTGLKVLRVHNVFLSGVLEYLSN----KLRLLSWHG 607

Query: 520 CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
            P + L  +    +L+ L +  + +E +W + ++L       K  +   + + K L + P
Sbjct: 608 YPFRNLPSDFKPSELLELNLQNSCIENIWRETEKLD------KLKV-INLSNSKFLLKTP 660

Query: 578 D--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
           D   + NLE L + G T ++EL +S+G L  +  L L +  +L+ I  +I  L  L  L 
Sbjct: 661 DLSTVPNLERLVLNGCTRLQELHQSVGTLKHLIFLDLKDCKSLKSICSNI-SLESLKILI 719

Query: 635 ISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNE 690
           +S C RL+  PE+  N+ L+   +   T++ KL   +  ++S++ ++L  C  L+  PN 
Sbjct: 720 LSGCSRLENFPEIVGNMKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNA 779

Query: 691 L 691
           +
Sbjct: 780 I 780



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++P+ L  LS +  L LS N     +P S+  L  L  L + +C RL++LP+ P +L  +
Sbjct: 892 DIPDDLSCLSSLHFLDLSRNL-FTNLPHSLSQLINLRCLVLDNCSRLRSLPKFPVSLLYV 950

Query: 655 SARNCTSLEK 664
            AR+C SL++
Sbjct: 951 LARDCVSLKE 960


>gi|356514917|ref|XP_003526148.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1106

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 248/789 (31%), Positives = 387/789 (49%), Gaps = 100/789 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR++FT+ L   L  + I+ F DD+ IR G++I+  L+  IE S + ++
Sbjct: 27  YDVFVSFRGEDTRNSFTAFLFEALKKQGIEAFKDDKDIRKGESIAPELIRAIEGSHVFLV 86

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
           +FS+ YASS W                      FY VDPS VRKQS  + + F++ ++  
Sbjct: 87  VFSKDYASSTWCLRELAHIWNCIQTSPRLLLPIFYDVDPSQVRKQSGDYEKAFAQHQQSS 146

Query: 98  RFPEK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS-KNKGLVG 155
           RF +K +K W+  L   A LSG+D    + +  +IEEI   +   L   F       LVG
Sbjct: 147 RFQDKEIKTWREVLNHVASLSGWDIRN-KQQHAVIEEIVQQIKNILGCKFSILPYDNLVG 205

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E    ++  L+C+G    V  + I G+GGI K T+  A++ +IS  F  S +  ++ + 
Sbjct: 206 MESHFAKLSKLICLGPVNDVRVVGITGMGGIGKSTLGRALYERISYRFNSSCYIDDISKL 265

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIES----QLNRLARKKVRIVFD--------DVT 260
               G   +QK+LLS+  K+ N+   N+        NRLA     IV D        D+ 
Sbjct: 266 YGLEGPLGVQKQLLSQSLKERNLEICNVSDGTILAWNRLANANALIVLDNVDQDKQLDMF 325

Query: 261 SGSR-------------VIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
           +GSR             +II +RD+Q+LK    +  Y++K L   DA +LFC+  F  ++
Sbjct: 326 TGSRNDLLRKRLGKGSIIIIISRDQQILKAHGVDVIYQVKPLNDNDALRLFCKKVFKNNY 385

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
           + +   +LT   + + +G PLA++V+G  L  +    W SA+  L       I  VL+IS
Sbjct: 386 IMSDFEKLTYDVLSHCKGHPLAIEVVGSSLFDKDVLHWRSALTWLRENKSKSIMNVLRIS 445

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIR 414
           +D L+D+ K +FLDIACF   +  + V  + D               KSLI +D    IR
Sbjct: 446 FDQLEDTHKEIFLDIACFFNNDMVEYVKEVLDFRGFNPESGLLVLVDKSLITMD-SRVIR 504

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDLL D+G+ IVR++S   P K +RLW  KD  +V   N   E +E I L    V  + 
Sbjct: 505 MHDLLCDLGKYIVREKSPRKPWKWSRLWDVKDFLKVKSDNKAAENVEAIVLSKKSVILQT 564

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKTL--NICA 529
            M   A S M  L+ L+F G KN     +  G       E+ +L W + P + L  +   
Sbjct: 565 -MRIDALSTMSSLKLLKF-GYKNVGFQINFSGTLAKLSNELGYLSWIKYPFECLPPSFEP 622

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLT 587
           +KLV L++P + ++QLW+  + LP+           ++   K L ++P  ++   LE L 
Sbjct: 623 DKLVELRLPYSNIKQLWEGTKPLPNLR-------RLDLFGSKNLIKMPYIEDALYLESLN 675

Query: 588 VKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           ++G   + E+  S+     +  L L N  +L ++P     L  L  L +  C +L+ +  
Sbjct: 676 LEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPRFGEDLI-LGKLVLEGCRKLRHIDP 734

Query: 647 ---LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL----------DPNELSE 693
              L   L  L+ +NC +L  LP  +  ++S+ Y+NL    K+          D  +L +
Sbjct: 735 SIGLLKKLRELNLKNCKNLVSLPNSILGLNSLQYLNLSGCSKVYNTELLYELRDAEQLKK 794

Query: 694 IVKDGWMKH 702
           I KDG   H
Sbjct: 795 IDKDGAPIH 803



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 24/174 (13%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           E+P+++G +S ++RL LS N N   +P +++ LSKL  L + HC++L++LPELP  + + 
Sbjct: 843 EIPDAIGIMSCLERLDLSGN-NFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSRIEIP 900

Query: 655 SARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSM 714
           +          PAG     + LY+  C   KL   E    +   WM   L  +  I  S+
Sbjct: 901 T----------PAGYFGNKAGLYIFNCP--KLVDRERCTNMAFSWMMQ-LCSQVCILFSL 947

Query: 715 YF-------PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP 761
           ++       PG+EIP+WF ++  G+  +L   P         I  AFCA+ V P
Sbjct: 948 WYYHFGGVTPGSEIPRWFNNEHEGNCVSLDASPVMHD--RNWIGVAFCAIFVVP 999


>gi|297801412|ref|XP_002868590.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314426|gb|EFH44849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 624

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 204/615 (33%), Positives = 305/615 (49%), Gaps = 70/615 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL H  + K I  F D ++ RG  I   L   I  S ++I++
Sbjct: 11  YHVFPSFHGPDVRRTFLSHLQHHFASKGITVFKDQEIKRGQTIGLELKQAIRESRVSIVV 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S++YASS W                      FY +DP HVRKQ   FGR F        
Sbjct: 71  LSKKYASSSWCLDELVEILKCREACGKIVMTIFYEIDPFHVRKQIGDFGRAFRETCFSKT 130

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           +K++ +W  ALT+ A+++G  S     E+K+IE+IA DV  +L+AT      G+VG+E  
Sbjct: 131 KKVRLKWSKALTDVANIAGEHSLRWEDEAKMIEKIAADVSNKLNATPSKDFDGMVGMEAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + ++ + L +  +GV  + I G  GI K TIA A+FN++S +F+   F  N++ +  +  
Sbjct: 191 LRKVNAYLHLECDGVKMIGIQGPAGIGKTTIARALFNQLSANFQLKCFIENLKGSYGSDV 250

Query: 220 IKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
           I D      LQ +LLS++   KD  + ++ +   RL  +KV IV DDV            
Sbjct: 251 IDDYGSKLCLQNQLLSKILNEKDMTIDHLGAIKERLLDQKVLIVLDDVDDLEQLDVLAKE 310

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+ +TT D+Q+L   W N  Y +      +A ++ C  AF  +       EL
Sbjct: 311 PSWFGLGSRIFVTTEDRQILNAHWVNYIYHVGYPSEEEALEILCLSAFQKNSPLVGFEEL 370

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             K   +   +PL L+V+G  L   S+  WE  + KLE     +IE VL++ Y  L    
Sbjct: 371 AKKITNFCGSLPLGLRVVGSSLRRESRHEWERQLSKLETSLDRKIENVLRVGYCKLSKKD 430

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           +++FL IA F   E  D V ++               A KSL+++     I+MH LL+ +
Sbjct: 431 QSLFLHIALFFNNETVDHVTTMLADSNLDISNGMKTLADKSLVHISTIGWIKMHRLLQQL 490

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR++V ++S + PGKR  L   ++I  VL   TGT ++ GIS DM+K++ E  +   AF 
Sbjct: 491 GRQLVHEQS-DDPGKRQFLVEAEEIRDVLANETGTGSVIGISFDMSKIS-EFSITGRAFE 548

Query: 483 KMPKLRFLRFYG-----DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
            M  LRFLR YG     D    +   +E +P   ++ L W   P K L      E L+ L
Sbjct: 549 GMRNLRFLRIYGRYFSKDVTLGISEDMEYLP--RLKLLHWDSYPRKRLPQTFRPECLIEL 606

Query: 536 KMPCTKVEQLWDDVQ 550
           +M  +K E+LW  +Q
Sbjct: 607 RMQFSKREKLWGGIQ 621


>gi|297815592|ref|XP_002875679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321517|gb|EFH51938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1196

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 243/791 (30%), Positives = 382/791 (48%), Gaps = 121/791 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R    SH+      K I TFID+ + R   I   L   I+ S IAI++
Sbjct: 53  HDVFPSFHGADVRRTLLSHIMESFRRKGIDTFIDNNIERSKPIGPELKEAIKGSKIAIVL 112

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F +  K + 
Sbjct: 113 LSKNYASSSWCLDELAEIMKCREVLGQIVMTIFYEVDPTDIKKQTGDFGKAFRKTCKGKT 172

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G  S     E+++IE+I+ DV   L+ +  S++ +GLVG+  
Sbjct: 173 KEHIERWRKALKDVAIIAGEHSRNWSNEAEMIEKISIDVSNMLNLSIPSRDFEGLVGMRA 232

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E  L +  + V  + IWG  GI K TIA  + N++S  F+ S   +N++      
Sbjct: 233 HMDRMEQFLRLDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSTIMVNIKGCYPRP 292

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
             +E      LQ ++LS+L   KD  + ++     RL  KKV +V D+V           
Sbjct: 293 CFDEYTAQLQLQTQMLSQLIKHKDITISHLGVAQERLKDKKVILVLDEVDHLGQLEALAK 352

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N+ Y++      +A ++FC  AFG          
Sbjct: 353 EIQWFGPGSRIIITTEDLGVLKAHGINQVYKVDFPSSDEAFQIFCMNAFGQKQPHEGFRN 412

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  + I  A  +PL LKVLG  L G SK  WE A+ +L+     +I  +++ SYD+L D 
Sbjct: 413 LAWEVIALAGELPLGLKVLGSALRGMSKPEWERALPRLKASLDGKIGSIIQFSYDALCDE 472

Query: 375 QKNVFLDIACFLE--GEHRDEVISIFDAS-----------KSLINLDLFYRIRMHDLLRD 421
            K +FL IAC       HR E       S           KSLI+++ + RI+MH LL+ 
Sbjct: 473 DKYLFLYIACLFNFASVHRVEEALANKFSHVRHGLHVLHEKSLISIE-YERIQMHTLLQQ 531

Query: 422 MGREIVRKESINHP-GKRNRLWHHKDIYQVLKKNTG-TEAIEGISLDMNKVNREIHMNSY 479
            GR+I RK+ ++H   K   L   +DI  V   +T  +    GI+LD++K   E++++  
Sbjct: 532 FGRKISRKQFVHHGLTKHQLLVGERDICDVFDYDTSDSRRFIGINLDLSKTEEELNISEK 591

Query: 480 AFSKMPKLRFLRFYGD---KNKCMVSHLEGVPF--AEVRHLEWPQ----CPLKTLNICAE 530
           A  +M   +F+R YGD   + K + S L+G+ +   ++R L W      C   T N   E
Sbjct: 592 ALERMHDFQFVRIYGDDLGQTKRLQSVLQGLIYHSQKIRSLNWRYFQDICLPSTFN--PE 649

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
            LV L +  +K+++LW+  ++L       K     ++   + L+ LPD     NLE + +
Sbjct: 650 FLVELNLQDSKLQKLWEGTKQL-------KNLKWMDLGGSRDLKELPDLSTATNLEEVDL 702

Query: 589 K-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP-- 645
           +  +++ ELP S+G  + ++RL L + S+L  +P SI + SKL  L++ +C  L  LP  
Sbjct: 703 QYCSSLVELPSSIGNATKLERLYLRDCSSLVELP-SIGNASKLERLYLDNCSSLVKLPSS 761

Query: 646 ----------------------------ELPCNLGL------LSARNCTSLEKLPAGLSS 671
                                       ELP ++G       L    C+SL KLP+ +  
Sbjct: 762 INASNLQEFIENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVKLPSSIGD 821

Query: 672 MSSVLYVNLCN 682
           M+ +   +L N
Sbjct: 822 MTKLKKFDLSN 832



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 41/222 (18%)

Query: 530  EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL  LKM  C+K+E L  ++          ++  T ++ +C  L+R P+   N+ YL +
Sbjct: 847  QKLSKLKMYGCSKLEVLPTNID--------LESLRTLDLRNCSQLKRFPEISTNIAYLRL 898

Query: 589  KGTTIRELP-----------------ESLGRLSWVKRLI--LSNNSNLERIPESIRHLSK 629
             GT I+E+P                 ESL        +I  L  N +++ +   ++ +S+
Sbjct: 899  TGTAIKEVPLSIMSWSRLYDFGISYFESLKEFPHALDIITQLQLNEDIQEVAPWVKGMSR 958

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
            L  L + +C  L +LP+   +L  + A NC SLE+L    ++    L    C  L  +  
Sbjct: 959  LRVLRLYNCNNLVSLPQFSDSLAYIDADNCQSLERLDCTFNNPDIHLKFPKCFNLNQEAR 1018

Query: 690  ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMG 731
            +L        + H+   E  I      PG ++P  F H++  
Sbjct: 1019 DL--------IMHTSTSEYAI-----LPGTQVPACFNHRATA 1047



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 9/91 (9%)

Query: 582 NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           NL+ L + G +++ +LP S+G ++ +K+  LSN S+L  +P +I  L KL+ L +  C +
Sbjct: 800 NLKELYISGCSSLVKLPSSIGDMTKLKKFDLSNCSSLVEVPSAIGKLQKLSKLKMYGCSK 859

Query: 641 LQTLPELPCNLGL-----LSARNCTSLEKLP 666
           L+    LP N+ L     L  RNC+ L++ P
Sbjct: 860 LEV---LPTNIDLESLRTLDLRNCSQLKRFP 887


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 231/755 (30%), Positives = 373/755 (49%), Gaps = 85/755 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 98  HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 157

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY VDP+ ++KQ+  FG+ F++  R + 
Sbjct: 158 LSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGKP 217

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+++RW+ AL + A ++G+ S+  R E+ +IE+I+ DV   L++   S++  GLVG+  
Sbjct: 218 KEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMRA 277

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N++      
Sbjct: 278 HMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRP 337

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 338 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 397

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y+++     +A ++FC  AFG         E
Sbjct: 398 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDE 457

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  +    A  +PL LKVLG  L G+SK  WE  + +L+     +I  +++ SYD L D 
Sbjct: 458 IAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDVLCDE 517

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFYRIRMHDLLRDM 422
            K +FL IAC   GE   +V  +              A KSLI+ D   RI MH LL   
Sbjct: 518 DKYLFLYIACLFNGESTTKVKELLGKFLDVKQGLHLLAQKSLISFD-GERIHMHTLLEQF 576

Query: 423 GREIVRKESINHP-GKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHMNSYA 480
           GRE  RK+ ++H   KR  L   + I +VL  + T +    GI L+++    E++++   
Sbjct: 577 GRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEELNISEKV 636

Query: 481 FSKMPKLRFLRFYGD-KNKCMVSHLEGVPF--AEVRHLEW----PQCPLKTLNICAEKLV 533
             ++    F+R     + + +   L+ + +   ++R L W      C   T N   E LV
Sbjct: 637 LERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPSTFN--PEFLV 694

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L M  + + +LW+  ++L       +     ++     L+ LP+     NLE L ++  
Sbjct: 695 ELDMRSSNLRKLWEGTKQL-------RNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC 747

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---EL 647
           +++ ELP S+ +L+ ++ L L N S+LE++P +I + +KL  L + +C  L  LP     
Sbjct: 748 SSLVELPSSIEKLTSLQILDLENCSSLEKLP-AIENATKLRELKLQNCSSLIELPLSIGT 806

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
             NL  L+   C+SL KLP+ +  ++ +   +L N
Sbjct: 807 ATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSN 841



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 48/242 (19%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            C+K+E L  ++          K+  T  + DC  L+  P+   ++  L +KGT I+E+P 
Sbjct: 866  CSKLEALPINI--------NLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPL 917

Query: 599  SLG--------RLSWVKRLI-----------LSNNSNLERIPESIRHLSKLTFLFISHCE 639
            S+         ++S+ + L+           L  + +++ +P  ++ +S+L  L +++C 
Sbjct: 918  SIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPWVKRMSRLRDLSLNNCN 977

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
             L +LP+L  +L  + A NC SLE+L    ++    LY   C  L  +  +L        
Sbjct: 978  NLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDL-------- 1029

Query: 700  MKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTR-PPRPAGYNKLISFAFCAV 757
            + H+  +         FPG ++P  F H++  G S  +K +  P P      + F  C +
Sbjct: 1030 IMHTCID-------AMFPGTQVPACFIHRATSGDSLKIKLKESPLPTT----LRFKACIM 1078

Query: 758  VV 759
            +V
Sbjct: 1079 LV 1080


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 231/755 (30%), Positives = 373/755 (49%), Gaps = 85/755 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 98  HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 157

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY VDP+ ++KQ+  FG+ F++  R + 
Sbjct: 158 LSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGKP 217

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+++RW+ AL + A ++G+ S+  R E+ +IE+I+ DV   L++   S++  GLVG+  
Sbjct: 218 KEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMRA 277

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N++      
Sbjct: 278 HMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRP 337

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 338 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 397

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y+++     +A ++FC  AFG         E
Sbjct: 398 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDE 457

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  +    A  +PL LKVLG  L G+SK  WE  + +L+     +I  +++ SYD L D 
Sbjct: 458 IAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDVLCDE 517

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFYRIRMHDLLRDM 422
            K +FL IAC   GE   +V  +              A KSLI+ D   RI MH LL   
Sbjct: 518 DKYLFLYIACLFNGESTTKVKELLGKFLDVKQGLHLLAQKSLISFD-GERIHMHTLLEQF 576

Query: 423 GREIVRKESINHP-GKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHMNSYA 480
           GRE  RK+ ++H   KR  L   + I +VL  + T +    GI L+++    E++++   
Sbjct: 577 GRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEELNISEKV 636

Query: 481 FSKMPKLRFLRFYGD-KNKCMVSHLEGVPF--AEVRHLEW----PQCPLKTLNICAEKLV 533
             ++    F+R     + + +   L+ + +   ++R L W      C   T N   E LV
Sbjct: 637 LERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPSTFN--PEFLV 694

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG- 590
            L M  + + +LW+  ++L       +     ++     L+ LP+     NLE L ++  
Sbjct: 695 ELDMRSSNLRKLWEGTKQL-------RNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC 747

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP---EL 647
           +++ ELP S+ +L+ ++ L L N S+LE++P +I + +KL  L + +C  L  LP     
Sbjct: 748 SSLVELPSSIEKLTSLQILDLENCSSLEKLP-AIENATKLRELKLQNCSSLIELPLSIGT 806

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
             NL  L+   C+SL KLP+ +  ++ +   +L N
Sbjct: 807 ATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSN 841



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 48/242 (19%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            C+K+E L  ++          K+  T  + DC  L+  P+   ++  L +KGT I+E+P 
Sbjct: 866  CSKLEALPINI--------NLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPL 917

Query: 599  SLG--------RLSWVKRLI-----------LSNNSNLERIPESIRHLSKLTFLFISHCE 639
            S+         ++S+ + L+           L  + +++ +P  ++ +S+L  L +++C 
Sbjct: 918  SIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPWVKRMSRLRDLSLNNCN 977

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
             L +LP+L  +L  + A NC SLE+L    ++    LY   C  L  +  +L        
Sbjct: 978  NLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDL-------- 1029

Query: 700  MKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTR-PPRPAGYNKLISFAFCAV 757
            + H+  +         FPG ++P  F H++  G S  +K +  P P      + F  C +
Sbjct: 1030 IMHTCID-------AMFPGTQVPACFIHRATSGDSLKIKLKESPLPTT----LRFKACIM 1078

Query: 758  VV 759
            +V
Sbjct: 1079 LV 1080


>gi|297816422|ref|XP_002876094.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297321932|gb|EFH52353.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1195

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 301/1104 (27%), Positives = 465/1104 (42%), Gaps = 257/1104 (23%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF++FRGE+ R++F SHL   L    +  FID    +G  +       IE S IA+ I
Sbjct: 18   HQVFVNFRGEELRNSFVSHLRSALVRHGVNIFIDTNEQKGKPL-HVFFERIEESRIALAI 76

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FS RY  S+W                      FY+V    VR Q   FG  F  LR    
Sbjct: 77   FSLRYTESKWCLNELVKMKECMDKGKLLIIPIFYKVKAYEVRYQKGRFGYVFKNLRNADV 136

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL---------DATF-QSKN 150
             +  +W  AL+  AD  GF  +    E+  I  I  +V + L         DA F  SKN
Sbjct: 137  HQKNQWSEALSSVADRIGFPFDGKSDENNFINGIVEEVKEALSKILLDKTKDAFFYHSKN 196

Query: 151  KGL---------VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRH 201
              +          G++  +EE++  L +  E    L + G+ GI K T+A  ++  +   
Sbjct: 197  TSMSLGREKHEIYGLKQRLEELKEKLDLDCEETRILGVVGMPGIGKTTLAREIYESLRCK 256

Query: 202  FEGSYFALNVREAEETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIV 255
            F       ++R   +  G+  L   LL EL        +      ES    L   KV +V
Sbjct: 257  FLRHGLIQDIRRTSKELGLDCLPALLLEELLGVRIPDIESTRCAYESYKMELYTHKVLVV 316

Query: 256  FDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
             DDV+                 GSR++I T DK ++++  A+  Y + +L + D    F 
Sbjct: 317  LDDVSDKEQIDVLLGRCDWIRQGSRIVIATSDKSLIQDV-ADYTYVVPQLNHKDGLGHFG 375

Query: 300  QWAFGGDHLDASH-----IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
            ++AF  DH    H     ++L+ + + Y +G PL LK+LG  L G+ ++ W++ +  L  
Sbjct: 376  RYAF--DHHSNIHNNEVIMKLSKEFVHYGRGHPLVLKLLGADLNGKDEDHWKTKLATLAE 433

Query: 355  IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS------KSLINLD 408
                 I +VL++SYD L    K++FLDIACF   E    + S+ D+S      K+L+N  
Sbjct: 434  NSSQSIRDVLQVSYDELSQEHKDIFLDIACF-RSEDESYIASLLDSSEAASEIKALMNKF 492

Query: 409  LFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGIS 464
            +      R+ MHDLL    RE+ R+         +RLWHH+DI  VLK       + GI 
Sbjct: 493  MINVSEDRVEMHDLLYTFARELCRRAYTQDRRGPHRLWHHQDITDVLKNIEEGAEVRGIF 552

Query: 465  LDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLE 516
            L+MN++ RE+ ++S  F  M  LR+L+ Y           NK  +      P  EVR+L 
Sbjct: 553  LNMNEMKREMSLDSCTFKPMHGLRYLKIYSSHCPQQCKPNNKINLPDGLNFPLNEVRYLH 612

Query: 517  WPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD-----DVQRLP-------------SSL 556
            W Q PLK +  +     LV LK+P +K+E++W      D  +L              S L
Sbjct: 613  WLQFPLKEIPPDFNPRNLVDLKLPHSKIERIWSNDKDKDTPKLKWVNLNHSSNLWDLSGL 672

Query: 557  CTFKTPITFEIIDCKMLERLPD----ELE------------------NLEYLTVKGTTIR 594
               ++ +   +  C  L+ LP+     LE                  NLE L + GT+I+
Sbjct: 673  SKAQSLVFLNLKGCTSLKSLPEINLVSLEILILSNCSNLKEFRVISQNLETLYLDGTSIK 732

Query: 595  EL------------------------PESLGRLSWVKRLILSNNSNLER----------- 619
            EL                        P+ L  L  +K LILS+ S L++           
Sbjct: 733  ELPLNFNILQRLVILNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQKFPAIRESIMVL 792

Query: 620  --------------------------------IPESIRHLSKLTFLFISHCERLQTLPEL 647
                                            +P++I  L +L +L + +C+RL ++P+L
Sbjct: 793  EILRLDATTITEIPMISSLQCLCFSKNDQISSLPDNISQLFQLKWLDLKYCKRLTSIPKL 852

Query: 648  PCNLGLLSARNCTSLEKLPAGLSSMS------SVLYVNLCNFLKLDPNELSEIVKDGWMK 701
            P NL  L A  C SL+ +   L+ ++      S    + CN  KL+ +   EI      K
Sbjct: 853  PPNLQHLDAHGCCSLKTVSNPLACLTTTQQIYSTFIFSNCN--KLERSAKEEISSFAQRK 910

Query: 702  HSLYEERGIKK---------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
              L  +   +          S+ FPG+E+P WF H+++G    L+ R P     N+L S 
Sbjct: 911  CQLLLDAQKRCNGSDSEPLFSICFPGSELPSWFCHEAVG--PVLELRMPPHWHENRLASV 968

Query: 753  AFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRK-SEGHL--YSWFLGK------- 802
            A CAVV FP        KS E     N ++V C +K +  EG    +S+ +G+       
Sbjct: 969  ALCAVVSFP--------KSEE---QINCFSVKCTFKLEVKEGSWIEFSFPVGRWSNQDNI 1017

Query: 803  ISYVESDHVFLG---CNS----FGGEYFGPNYDEFSFR------IHCSFHF-----PPYL 844
            +  + S+H F+G   C+        ++F  +    S +         S +F        +
Sbjct: 1018 VETIASEHAFIGYISCSKIFKRLENQHFSSSNPTKSTQSSKCSPTKASLNFMVIDGKSEI 1077

Query: 845  ERGEVKKCGIHFVYAQDSADHILK 868
             R EV KCG+ F     S+ + LK
Sbjct: 1078 PRIEVLKCGLRFFEGAGSSGNYLK 1101


>gi|2245043|emb|CAB10461.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268437|emb|CAB80957.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1256

 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 252/813 (30%), Positives = 381/813 (46%), Gaps = 124/813 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  +SI TF+D  ++R   I+ +L+  I  + I+I+I
Sbjct: 13  YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ   FG  F +  +  P
Sbjct: 73  FSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKP 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  ALT+ ++L+G D      E+ ++++IANDV  +L           VG+E  
Sbjct: 133 EDQKQRWVKALTDISNLAGEDLRNGPTEAFMVKKIANDVSNKL-FPLPKGFGDFVGIEDH 191

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEET 217
           I+ I+S+LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         + 
Sbjct: 192 IKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDV 251

Query: 218 GGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
            G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV               
Sbjct: 252 SGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEW 311

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+ T+DKQ+LK    +  Y ++      A K+  Q+AFG D       EL  +
Sbjct: 312 FGSGSRIIVITQDKQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFE 371

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             +    +PL L VLG  L GR K+ W   M +L      +IEE L++ YD L+   + +
Sbjct: 372 VAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNREL 431

Query: 379 FLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           F  IACF  G           D+V     A KSLI +     I MH+LL  +GREI R +
Sbjct: 432 FKCIACFFNGFKVSNVKELLEDDVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAK 491

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD---MNKVNREIHMNSYAFSKMPKL 487
           S  +P KR  L + +DI +V+ + TGTE + GI +    +      + +N  +F  M  L
Sbjct: 492 SKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNL 551

Query: 488 RFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQL 545
           ++L   G  ++  +         +++ L+W  CPLK+L     AE LV+L M  +K+E+L
Sbjct: 552 QYLEI-GHWSEIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVNLIMKYSKLEKL 610

Query: 546 WDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLPDELE-------- 581
           W+    L S              +      I  E ++   C+ L  LP  ++        
Sbjct: 611 WEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRTL 670

Query: 582 -----------------NLEYLTVKGTTIRE------LPESLGRLSW----VKRL----- 609
                            NLEYL+V  +++        LP  L RL W    VKRL     
Sbjct: 671 YCSGVLLIDLKSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFK 730

Query: 610 ------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLLSARNCTS 661
                 +   NS+LE++ +  + L  L  +++   + L+ +P+  L  NL  L    C S
Sbjct: 731 AEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCES 790

Query: 662 LEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           L  LP+ + + + ++ +++  C  L+  P +L+
Sbjct: 791 LVTLPSSIQNATKLINLDMRDCKKLESFPTDLN 823



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)

Query: 534  SLKMPCTKVEQLWDDVQ-RLPSSLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKG 590
            ++KM C+  E L D  +  +         P   + +DC ++  +P E   E L +L V G
Sbjct: 843  AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYLDC-LMRCMPCEFRPEYLTFLDVSG 901

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                +L E +  L  +KR+ LS + NL  IP+ +   + L  L+++ C+ L TLP    N
Sbjct: 902  CKHEKLWEGIQSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGN 960

Query: 651  LG---LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
            L     L  + CT LE LP  + ++SS++ ++L  C+ L+  P
Sbjct: 961  LHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFP 1002



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 15/166 (9%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E L  L +   K E+LW+ +Q    SL + K     ++ + + L  +PD  +  NL+ L 
Sbjct: 892  EYLTFLDVSGCKHEKLWEGIQ----SLGSLKR---MDLSESENLTEIPDLSKATNLKRLY 944

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            + G  ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 945  LNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPL 1003

Query: 647  LPCNLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            +   +  L   N T++E++P  +  ++  SVL +  C  LK + PN
Sbjct: 1004 ISTRIECLYLEN-TAIEEVPCCIEDLTRLSVLLMYCCQRLKNISPN 1048


>gi|20270890|gb|AAM18462.1|AF440696_1 disease resistance protein RPP4 [Arabidopsis thaliana]
          Length = 1135

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 252/813 (30%), Positives = 381/813 (46%), Gaps = 124/813 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  +SI TF+D  ++R   I+ +L+  I  + I+I+I
Sbjct: 13  YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ   FG  F +  +  P
Sbjct: 73  FSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKP 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  ALT+ ++L+G D      E+ ++++IANDV  +L           VG+E  
Sbjct: 133 EDQKQRWVKALTDISNLAGEDLRNGPTEAFMVKKIANDVSNKL-FPLPKGFGDFVGIEDH 191

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEET 217
           I+ I+S+LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         + 
Sbjct: 192 IKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDV 251

Query: 218 GGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
            G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV               
Sbjct: 252 SGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEW 311

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+ T+DKQ+LK    +  Y ++      A K+  Q+AFG D       EL  +
Sbjct: 312 FGSGSRIIVITQDKQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFE 371

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             +    +PL L VLG  L GR K+ W   M +L      +IEE L++ YD L+   + +
Sbjct: 372 VAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNREL 431

Query: 379 FLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           F  IACF  G           D+V     A KSLI +     I MH+LL  +GREI R +
Sbjct: 432 FKCIACFFNGFKVSNVKELLEDDVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAK 491

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD---MNKVNREIHMNSYAFSKMPKL 487
           S  +P KR  L + +DI +V+ + TGTE + GI +    +      + +N  +F  M  L
Sbjct: 492 SKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNL 551

Query: 488 RFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQL 545
           ++L   G  ++  +         +++ L+W  CPLK+L     AE LV+L M  +K+E+L
Sbjct: 552 QYLEI-GHWSEIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVNLIMKYSKLEKL 610

Query: 546 WDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLPDELE-------- 581
           W+    L S              +      I  E ++   C+ L  LP  ++        
Sbjct: 611 WEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRTL 670

Query: 582 -----------------NLEYLTVKGTTIRE------LPESLGRLSW----VKRL----- 609
                            NLEYL+V  +++        LP  L RL W    VKRL     
Sbjct: 671 YCSGVLLIDLKSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFK 730

Query: 610 ------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCNLGLLSARNCTS 661
                 +   NS+LE++ +  + L  L  +++   + L+ +P+  L  NL  L    C S
Sbjct: 731 AEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCES 790

Query: 662 LEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           L  LP+ + + + ++ +++  C  L+  P +L+
Sbjct: 791 LVTLPSSIQNATKLINLDMRDCKKLESFPTDLN 823



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)

Query: 534  SLKMPCTKVEQLWDDVQ-RLPSSLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKG 590
            ++KM C+  E L D  +  +         P   + +DC ++  +P E   E L +L V G
Sbjct: 843  AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYLDC-LMRCMPCEFRPEYLTFLDVSG 901

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                +L E +  L  +KR+ LS + NL  IP+ +   + L  L+++ C+ L TLP    N
Sbjct: 902  CKHEKLWEGIQSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGN 960

Query: 651  LG---LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
            L     L  + CT LE LP  + ++SS++ ++L  C+ L+  P
Sbjct: 961  LHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFP 1002



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 15/166 (9%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E L  L +   K E+LW+ +Q    SL + K     ++ + + L  +PD  +  NL+ L 
Sbjct: 892  EYLTFLDVSGCKHEKLWEGIQ----SLGSLKR---MDLSESENLTEIPDLSKATNLKRLY 944

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            + G  ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 945  LNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPL 1003

Query: 647  LPCNLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            +   +  L   N T++E++P  +  ++  SVL +  C  LK + PN
Sbjct: 1004 ISTRIECLYLEN-TAIEEVPCCIEDLTRLSVLLMYCCQRLKNISPN 1048


>gi|240255823|ref|NP_193173.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658031|gb|AEE83431.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 251/873 (28%), Positives = 401/873 (45%), Gaps = 164/873 (18%)

Query: 33  FIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW--------------------- 71
           F D ++ R   I+ +L+  I+ S I+II+ S+ YASS W                     
Sbjct: 2   FDDQEIERSQTIAPALIKAIKESRISIILLSKNYASSSWCLDELLEIVKCKEAMGQIVMT 61

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRKR-FPEKMKRWKNALTEAADLSGFDSNVIRPESKL 130
            FY VDPS VRKQ+  FGR F+    R   EK ++W  AL    +++G        ESK+
Sbjct: 62  VFYGVDPSDVRKQTGEFGRSFNETCSRSTKEKRRKWSQALNHVGNIAGEHFQNWDNESKM 121

Query: 131 IEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKIT 189
           IE+I+ D+  +L++T       +VG+E  +EE++ LL +   +G   + I G  GI K T
Sbjct: 122 IEKISRDISNKLNSTISRDFDDMVGLEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKTT 181

Query: 190 IAGAVFNKISRHFEGSYFALNV-----REAEETGGIKDLQKKLLSELSKDGNMR--NIES 242
           IA A+++ +   F+ S F  N+     R  +E G    LQ++LLS++     MR  ++ +
Sbjct: 182 IARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKLRLQEQLLSKILNQNGMRIYHLGA 241

Query: 243 QLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRM 286
              RL  +KV IV DDV                  GSR+I+TT DK +L+    NK Y +
Sbjct: 242 IQERLCDQKVLIVLDDVNDLKQLEALANETSWFGPGSRIIVTTEDKGLLEQHGINKTYHV 301

Query: 287 KELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWE 346
                 +A ++FC +AF          +LT +       +PL L+V+G  L G+ ++ WE
Sbjct: 302 GFPSIEEALEIFCIYAFRKSSPPDGFKKLTKRVTNVFDNLPLGLRVMGSSLRGKGEDEWE 361

Query: 347 SAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS----- 401
           + + +LE      IE  L++ YDSL + ++ +FL IA F      + VI++   S     
Sbjct: 362 ALLDRLETSLDRNIEGALRVGYDSLQEEEQALFLHIAVFFNYNKDEHVIAMLADSNLDVK 421

Query: 402 ---KSLINLDLFYR-----IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
              K L N  L YR     I MH LL+ +GR+ ++++    P KR+ L    +I  VL+ 
Sbjct: 422 QGLKILTNKSLVYRSTSGKIVMHKLLQQVGRKAIQRQ---EPWKRHILIDAHEICYVLEN 478

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK--NKCMVSHLEGVPF-A 510
           +T T A  GISLD + +N+ I ++  AF +M  LRFL  Y  +      V   E + F  
Sbjct: 479 DTDTRAALGISLDTSGINKVI-ISEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLEFPP 537

Query: 511 EVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQRL---------------- 552
            +R L W   P   L      E LV L M  +++E+LW   Q L                
Sbjct: 538 HLRLLRWEAYPSNALPTTFHPEYLVELDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKE 597

Query: 553 ------------------------PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
                                   PSS    +   T  I +C  LE +P    L +L++ 
Sbjct: 598 LPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFF 657

Query: 587 TVKG---------------------TTIRELPESLGRLSWVKRLILSNNSN--------- 616
            + G                     T + ELP S+   + ++ L++S + N         
Sbjct: 658 NMHGCFQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPL 717

Query: 617 -----------LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
                      +E+IP+ I+ L +L+FL I  C  L++LP+LP ++  L+A +C SLE +
Sbjct: 718 SLTYLDLRCTGIEKIPDWIKDLHELSFLHIGGCRNLKSLPQLPLSIRWLNACDCESLESV 777

Query: 666 PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
            A +SS++S + +N  N  KL+     ++++  +        R ++     PG E+P+ F
Sbjct: 778 -ACVSSLNSFVDLNFTNCFKLNQETRRDLIQQSFF-------RSLR---ILPGREVPETF 826

Query: 726 RHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
            HQ+ G+  T+  RP   + ++    F  C V+
Sbjct: 827 NHQAKGNVLTI--RPESDSQFSASSRFKACFVI 857


>gi|224114307|ref|XP_002332394.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832717|gb|EEE71194.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 516

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 197/516 (38%), Positives = 285/516 (55%), Gaps = 63/516 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           M+DVFLSFRG+DTR+NFTSHL+  L+ + IK + DD +L RG  I  +L   IE S  + 
Sbjct: 2   MHDVFLSFRGKDTRNNFTSHLYSNLTQRGIKVYRDDSELERGKTIEPALWKAIEESRFSA 61

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           IIFS  YASS W                      FY VDPS V +Q   + + F +  + 
Sbjct: 62  IIFSRDYASSPWCLDELVKIVQCMKEKGQTVLPVFYDVDPSEVAEQKGKYKKAFVKHEQN 121

Query: 99  FPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F E   K++ WK+ L+  A+LSG+D    R ES+ I+ IA+ +  +L  T  + +K LVG
Sbjct: 122 FKENLEKVRNWKDCLSMVANLSGWDVRN-RDESESIKAIADCISYKLSLTLPTISKELVG 180

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +E +   +   +     + I G+GGI K T+A  ++++I R FEGS F  NVREA 
Sbjct: 181 IDSRLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAF 240

Query: 215 EETGGIKDLQKKLLSE--LSKDGNM----RNIESQLNRLARKKVRIVFDDVTS------- 261
            E  G + LQKKLLS+  + +D N+      IE    +L R K+ +V DDV         
Sbjct: 241 AEKDGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYL 300

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IIT+RD  VL      K Y  ++L   DA  LF Q AF  D      
Sbjct: 301 AKEPGWFGPGSRIIITSRDTNVLIGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGF 360

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +EL+ + + YA G+PLAL+V+G +L  RS   W  A+ ++  IP  +I +VL++S+D L 
Sbjct: 361 VELSKQVVDYANGLPLALEVIGSFLYERSIPEWRGAINRMNEIPDCKIIDVLRVSFDGLH 420

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           +S K +FLDIACFL+G  +D +  I ++              +SLI++    ++ MHDLL
Sbjct: 421 ESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSR-DQVWMHDLL 479

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           + MG+EIVR ES   PG+R+RLW ++D+   L  NT
Sbjct: 480 QIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNT 515


>gi|14532598|gb|AAK64027.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|25054971|gb|AAN71957.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 703

 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 207/615 (33%), Positives = 318/615 (51%), Gaps = 70/615 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRG+D R NF SH+      K I  FID+++ RG++I   L+  I  S IAI++
Sbjct: 80  HHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRESKIAIVL 139

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS+W                      FY VDPSHV+K +  FG  F +  + R 
Sbjct: 140 LSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYEVDPSHVKKLTGEFGAVFQKTCKGRT 199

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL-DATFQSKNKGLVGVEC 158
            E + RW+ A  E A ++G+DS     E+ +IEEIA ++ KRL +++  S  +GL+G++ 
Sbjct: 200 KENIMRWRQAFEEVATIAGYDSRNWENEAAMIEEIAIEISKRLINSSPFSGFEGLIGMKA 259

Query: 159 SIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSYF-----ALNVR 212
            IE+++ LLC+ S    + + I G  GI K TIA  + N+IS  F+ S F     +    
Sbjct: 260 HIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSYTRP 319

Query: 213 EAEETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS-------- 261
              +   +K  L+++ L++L   +D  +  + +  N +  KKV IV D V          
Sbjct: 320 ICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLDGVDQLVQLLAMP 379

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT+D+Q+LK       Y +      +A ++FC  AFG D  D    +
Sbjct: 380 KAVCLGPGSRIIITTQDQQLLKAFQIKHIYNVDFPPDHEALQIFCIHAFGHDSPDDGFEK 439

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  K  + A  +PL L+V+G +  G SKE W+  + +L I    EI  +LK SYD LDD 
Sbjct: 440 LATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKFSYDVLDDE 499

Query: 375 QKNVFLDIACFLEGEHRDEVIS--------------IFDASKSLINLDLFYRIRMHDLLR 420
            K++FL IACF   E  D                       +SLI+ DL     MH+LL 
Sbjct: 500 DKDLFLHIACFFNDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLISEDLTQ--PMHNLLV 557

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +GREIVR +S+  PGKR  L   K+I +VL  +TG+E++ GI+ ++     E++++   
Sbjct: 558 QLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELNISDRV 617

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHL-EGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSL 535
           F  M  L+F RF  D+N     HL +G+ +   ++R L W   P+ +L      + LV +
Sbjct: 618 FEGMSNLQFFRF--DENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFNLKFLVKI 675

Query: 536 KMPCTKVEQLWDDVQ 550
            +  +++E+LW+ +Q
Sbjct: 676 ILKHSELEKLWEGIQ 690


>gi|15223555|ref|NP_176047.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9954758|gb|AAG09109.1|AC009323_20 Putative disease resistance protein [Arabidopsis thaliana]
 gi|332195284|gb|AEE33405.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1096

 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 253/895 (28%), Positives = 397/895 (44%), Gaps = 172/895 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL    +   I  F D ++ R   I+ +L   I  S IAI++
Sbjct: 15  YNVFTSFHGPDVRKTFLSHLRKQFNYNGITMFDDQRIERSQIIAPALTEAIRESRIAIVL 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY V PS VRKQ+  FG  F+    ++ 
Sbjct: 75  LSKNYASSSWCLDELLEILDCKEQLGQIVMTVFYGVHPSDVRKQTGDFGIAFNETCARKT 134

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  ALT   +++G        E+K+IE+IA+DV  +L+ T      G++G+E  
Sbjct: 135 EEQRQKWSQALTYVGNIAGEHFQNWDNEAKMIEKIASDVSDKLNTTPSRDFDGMIGLEAH 194

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + +IESLL +  +G   + I G  GI K TIA A+ + +S+ F+ + F  N+ E+ + G 
Sbjct: 195 LRKIESLLDLDYDGAKIVGISGPAGIGKSTIARALHSVLSKRFQHNCFMDNLHESYKIGL 254

Query: 220 IK--DLQKKLLSELSKDGNMRNIE-SQLN----RLARKKVRIVFDDVTS----------- 261
           ++     +     LSK  N+  I  + L     RL  +KV I+ DDV S           
Sbjct: 255 VEYGLRLRLQEQLLSKILNLDGIRIAHLGVIRERLHDQKVLIILDDVESLDQLDALANIE 314

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVI+TT +K++L+    +  Y +      +A  +FC  AF         + L  
Sbjct: 315 WFGPGSRVIVTTENKEILQQHGISDIYHVGFPSSKEALMIFCLSAFRQLSPPDRFMNLAA 374

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           +  K    +PLAL VLG  L G++   W   + +L+      IE VLK+ Y+SL +  + 
Sbjct: 375 EVAKLCGYLPLALHVLGSSLRGKNYSDWIEELPRLQTCLDGRIESVLKVGYESLHEKDQA 434

Query: 378 VFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIR-----------------MHDLLR 420
           +FL IA F   +H D V S+   +K+ +N+ L  +I                  MH LL+
Sbjct: 435 LFLYIAVFFNYQHADYVTSML--AKTNLNVRLGLKILANRHLIHIGHGAKGIVVMHRLLK 492

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            M R+++ K+    P KR  L   ++I  VL+   G  +I GIS D+ ++N+ + +++ A
Sbjct: 493 VMARQVISKQ---EPWKRQILVDTQEISYVLENAEGNGSIAGISFDVGEINK-LTISAKA 548

Query: 481 FSKMPKLRFLRFYGD--KNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSL 535
           F +M  L  L+ Y      K  V   E + F   +  L W     KTL    C E LV L
Sbjct: 549 FERMHNLLLLKVYDPWFTGKGQVHIPEEMDFLPRLSLLRWDAYTRKTLPRRFCPENLVEL 608

Query: 536 KMPCTKVEQLWDDVQ----------------------------------------RLPSS 555
            MP +++E+LW+  Q                                         LPSS
Sbjct: 609 NMPDSQLEKLWEGTQLLANLKTMKLSRSSRLKELPNLSNAKNLERLDLHECVALLELPSS 668

Query: 556 LCTFKTPITFEIIDCKMLE-----------------------RLPDELENLEYLTVKGTT 592
           +         E   C+ L+                         PD   N+  L+V  TT
Sbjct: 669 ISNLHKLYFLETNHCRRLQVIPTLTNLVSLEDIKMMGCLRLKSFPDIPANIIRLSVMETT 728

Query: 593 IRELPESLGRLSWVKRLILS---------------------NNSNLERIPESIRHLSKLT 631
           I E P SL   S ++   +S                     +NS +E I + I+ L  L 
Sbjct: 729 IAEFPASLRHFSHIESFDISGSVNLKTFSTLLPTSVTELHIDNSGIESITDCIKGLHNLR 788

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL 691
            L +S+C++L +LP+LP +L  L A +C SLE++   L++ ++ L  +  N  KLD    
Sbjct: 789 VLALSNCKKLTSLPKLPSSLKWLRASHCESLERVSEPLNTPNADL--DFSNCFKLDRQ-- 844

Query: 692 SEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
                    + +++++R +      PG ++P  F H++ G+S T+    P  A Y
Sbjct: 845 --------ARQAIFQQRFVDGRALLPGRKVPALFDHRARGNSLTI----PNSASY 887


>gi|21539521|gb|AAM53313.1| disease resistance RPP5-like protein [Arabidopsis thaliana]
          Length = 1147

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 253/824 (30%), Positives = 385/824 (46%), Gaps = 134/824 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  +SI TF+D  ++R   I+ +L+  I  + I+I+I
Sbjct: 13  YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ   FG  F +  +  P
Sbjct: 73  FSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKP 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  ALT+ ++L+G D      E+ ++++IANDV  +L           VG+E  
Sbjct: 133 EDQKQRWVKALTDISNLAGEDLRNGPTEAFMVKKIANDVSNKL-FPLPKGFGDFVGIEDH 191

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEET 217
           I+ I+S+LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         + 
Sbjct: 192 IKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDV 251

Query: 218 GGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
            G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV               
Sbjct: 252 SGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEW 311

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+ T+DKQ+LK    +  Y ++      A K+  Q+AFG D       EL  +
Sbjct: 312 FGSGSRIIVITQDKQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFE 371

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             +    +PL L VLG  L GR K+ W   M +L      +IEE L++ YD L+   + +
Sbjct: 372 VAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNREL 431

Query: 379 FLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           F  IACF  G           D+V     A KSLI +     I MH+LL  +GREI R +
Sbjct: 432 FKCIACFFNGFKVSNVKELLEDDVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAK 491

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD---MNKVNREIHMNSYAFSKMPKL 487
           S  +P KR  L + +DI +V+ + TGTE + GI +    +      + +N  +F  M  L
Sbjct: 492 SKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNL 551

Query: 488 RFLRFYGDKNKCMVSHL---------EGVPF--AEVRHLEWPQCPLKTL--NICAEKLVS 534
           ++L         + S +         +G+ +   +++ L+W  CPLK+L     AE LV+
Sbjct: 552 QYLEIGHWSEIGLWSEIGLWSKIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVN 611

Query: 535 LKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLPD 578
           L M  +K+E+LW+    L S              +      I  E ++   C+ L  LP 
Sbjct: 612 LIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPS 671

Query: 579 ELE-------------------------NLEYLTVKGTTIRE------LPESLGRLSW-- 605
            ++                         NLEYL+V  +++ +      LP  L RL W  
Sbjct: 672 SIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDWSSMEDTQGLIYLPRKLKRLWWDY 731

Query: 606 --VKRL-----------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCN 650
             VKRL           +   NS+LE++ +  + L  L  +++   + L+ +P+  L  N
Sbjct: 732 CPVKRLPSNFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAIN 791

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           L  L    C SL  LP+ + + + ++ +++  C  L+  P +L+
Sbjct: 792 LERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDLN 835



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)

Query: 534  SLKMPCTKVEQLWDDVQ-RLPSSLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKG 590
            ++KM C+  E L D  +  +         P   + +DC ++  +P E   E L +L V G
Sbjct: 855  AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYLDC-LMRCMPCEFRPEYLTFLDVSG 913

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                +L E +  L  +KR+ LS + NL  IP+ +   + L  L+++ C+ L TLP    N
Sbjct: 914  CKHEKLWEGIQSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGN 972

Query: 651  LG---LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
            L     L  + CT LE LP  + ++SS++ ++L  C+ L+  P
Sbjct: 973  LHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFP 1014



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 15/166 (9%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E L  L +   K E+LW+ +Q    SL + K     ++ + + L  +PD  +  NL+ L 
Sbjct: 904  EYLTFLDVSGCKHEKLWEGIQ----SLGSLKR---MDLSESENLTEIPDLSKATNLKRLY 956

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            + G  ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 957  LNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPL 1015

Query: 647  LPCNLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            +   +  L   N T++E++P  +  ++  SVL +  C  LK + PN
Sbjct: 1016 ISTRIECLYLEN-TAIEEVPCCIEDLTRLSVLLMYCCQRLKNISPN 1060


>gi|224085411|ref|XP_002307568.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857017|gb|EEE94564.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 541

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 194/521 (37%), Positives = 277/521 (53%), Gaps = 62/521 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF+G DT   FT HL+  L    I TF D +++  G+ I    L  IE S  +I+
Sbjct: 13  YDVFLSFKGADTGKGFTDHLYSALVRDGIHTFRDVNEINSGEEIGPEYLQAIEKSRFSIV 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YASS W                      FY +DPS V +   SF   F+   K F
Sbjct: 73  ILSKGYASSTWCLDELVHILECRKEGGHAVWPVFYDIDPSDVEELKGSFEEAFAEHEKSF 132

Query: 100 PE---KMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            +   K++RWK+AL E A L G D   +    E+K I+ I  ++  RLD T  S     V
Sbjct: 133 KDDMDKVQRWKDALREVAYLKGLDLQKHWDGHEAKNIDYIVKEISDRLDRTILSVTTHPV 192

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G+    +E+ SLL      V  + I+G+GGI K T+A  V+N +   FEGS F  NVR+ 
Sbjct: 193 GLLSRAKEVISLLGEKLVDVRIVGIYGMGGIGKTTVAKKVYNLVFHEFEGSCFLENVRKE 252

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
             + GI  LQ++LLSE    K   + NI   LN    RL RK++ IV DD+         
Sbjct: 253 SISKGIACLQRQLLSETLKRKHEKIDNISRGLNVIRDRLHRKRIFIVLDDIDELEQLNKI 312

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTR K +L+      +Y ++EL   D+ +L    AF   H   ++
Sbjct: 313 LGNFDWLFPGSRVIITTRIKDLLQPSELYLQYEVEELNNDDSLQLLRLHAFNEHHPVDNY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++   + + Y +G+PLAL+VLG  LCG++  VW S + KL++I + +I   LKIS DSLD
Sbjct: 373 MDCMRRIVSYVRGIPLALEVLGSSLCGQTINVWNSKLEKLKVIGNGDIHNKLKISNDSLD 432

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLL 419
           D++K +FLDIACF  G ++D ++SI +               + ++ +    ++ MHDLL
Sbjct: 433 DTEKFIFLDIACFFIGFNKDYIMSILEDCGFFPADGINTLMRRCIVKVGPDNKLSMHDLL 492

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI 460
           RDMGREIVR+ES   PG+R+RLW  +D+  V+      E++
Sbjct: 493 RDMGREIVRQESSTDPGERSRLWRQEDVIDVITDRMVRESL 533


>gi|357474813|ref|XP_003607692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508747|gb|AES89889.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1181

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 261/957 (27%), Positives = 420/957 (43%), Gaps = 230/957 (24%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR NFT HL   L  K I  F DD +L +G++I+  L+  IE S + I 
Sbjct: 78  YDVFVTFRGEDTRFNFTDHLFAALQRKGIFAFRDDTKLQKGESIAPELIRAIEGSQVFIA 137

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS W                      FY VDPS VR Q   +G  FS+  + F
Sbjct: 138 VLSKNYASSTWCLRELEYILHYSQVFGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTF 197

Query: 100 PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
                 ++RW+ ALT+  ++SG+D    +P+ + I++I +++L  L   + S  K LVG+
Sbjct: 198 QHDSHVVQRWREALTQVGNISGWDLRD-KPQYEEIKKIVDEILNILGHNYSSLPKELVGM 256

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              I+++ +LL + S + V  + I G+GGI K T+A A++ +IS  F+   F  ++ +  
Sbjct: 257 NSHIDKVANLLLLDSIDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSKIY 316

Query: 216 ETGGIKDLQKKLLSE-------------------------LSKDGNMRNIE--SQLNRLA 248
              G    QK++L +                         L     + N++   QL++L 
Sbjct: 317 RHDGQVGAQKQILHQTLGVEPFQLCNLYHTTDLMRRRLRRLRVLIIVDNVDKVGQLDKLG 376

Query: 249 RKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
             +     + + +GSR+II + D+ +LK    +  YR+  L + ++ +LF   AF   H+
Sbjct: 377 VNR-----EWLGAGSRIIIISGDEHILKEYGVDVVYRVPLLNWTNSLQLFSLKAFKLYHI 431

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
            + + ELT   + YA G+PLA+ VLG  L  RS   W S + KL++ PH +I +VL++S 
Sbjct: 432 ISDYEELTYDILNYANGLPLAITVLGSSLFSRSISEWRSELTKLKVSPHKDIMDVLQLSL 491

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRM 415
             L + +K +FL IACF  G   D V ++ +                SLI++    +I M
Sbjct: 492 IGLMEMEKEIFLHIACFFNGREEDYVKNVLNYCGFHADIGLRVLVDNSLIHISDESKIEM 551

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H L   +G+ IV + S     K +RLW H+  Y V+  N     +E + L      + I 
Sbjct: 552 HGLFEVLGKNIVHEIS----RKWSRLWLHEQFYNVVSNNMEIN-VEAVVLYGPGNEKGIL 606

Query: 476 MNSYAFSKM---------------------PKLRFLRFYGDKNKCMVSHLEGVPFAE--- 511
           M + A SKM                      KLR+L +  +K   M   L  +   E   
Sbjct: 607 M-AEALSKMNSLELLILKNVKVSGSLNYLSNKLRYLEWEAEKGILMAEALSKMNSLELLI 665

Query: 512 ----------------VRHLEWPQCPLKTLNICAE--KLVSLKMPCTKVEQLWDDVQRLP 553
                           +R+LEW + P   L   ++  +L  L +  + + QLW D + LP
Sbjct: 666 LKKVKVSGSLNYLSNKLRYLEWDEYPFLYLPSSSQLDELSELILVGSSITQLWKDKKYLP 725

Query: 554 ----------------------------------------SSLCTFKTPITFEIIDCKML 573
                                                   SS+   +  +   + +CK L
Sbjct: 726 NLRNLDLSCSKNLATMPHFAEFPNLKRLNLEGCVSLVQINSSIGLLRELVFLNLKNCKNL 785

Query: 574 ERLPDE---LENLEYLTVKGTT-----------------------------------IRE 595
             +P+E   L +L+Y T+ G +                                   + +
Sbjct: 786 ICIPNEISGLTSLKYFTICGCSNTFKNSKAHGYFSSCLLPSLPSVSCLSEIDISFCNLSQ 845

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +P++LG L+W++RL L  N N   +P S+R  S+L +L + HC++L +LPELP       
Sbjct: 846 IPDALGSLTWLERLNLRGN-NFVTLP-SLRDHSRLEYLNLEHCKQLTSLPELP------- 896

Query: 656 ARNCTSLEKLPAGLSS---MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK 712
                    LPA +       + +++  C   +L   E    +   WM H +  ++    
Sbjct: 897 ---------LPAAIKQDKHKRAGMFIFNCP--ELGEREQCINMTLSWMIHFIQGKQDSSA 945

Query: 713 SMY-----FPGNEIPKWFRHQSMGSSATLKTRPPRPAGY-NKLISFAFCAVVVFPAF 763
           S +      PG EIPKWF ++ MG S ++    P P  Y + +I  A CAV     F
Sbjct: 946 SFHQIDIVIPGTEIPKWFNNRRMGRSISID---PSPIVYDDNIIGIACCAVFSVELF 999


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 247/763 (32%), Positives = 369/763 (48%), Gaps = 114/763 (14%)

Query: 19  SHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW------ 71
           + L +    + I  ++DD +L RG  I  +L   IE S  ++IIFS  YASS W      
Sbjct: 85  ASLANTYHTRGIDVYMDDRELERGKAIEPALWKAIEESRFSVIIFSRDYASSPWCLDELV 144

Query: 72  ---------------FFYRVDPSHV----RKQSHSFGRHFSRLRKRFPEKMKRWKNALTE 112
                           FY VDPS V    RK   +FG H    ++   EK++ WK+ L+ 
Sbjct: 145 KIVQCMKEMGQTVLPVFYDVDPSEVTERKRKYEEAFGEHEQNFKENL-EKVRNWKDCLST 203

Query: 113 AADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE 172
            A+LSG+D    R ES+ I+ IA  +  +L  T  + +K LVG++  +E +     IG E
Sbjct: 204 VANLSGWDIRN-RNESESIKIIAEYISYKLSVTMPTISKKLVGIDSRVEVLNGY--IGEE 260

Query: 173 GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSEL 231
           G                              GS F  NVRE   +  G + LQ++LLSE+
Sbjct: 261 GG----------------KAIFIGICGMGGIGSCFLENVREDFAKKDGPRRLQEQLLSEI 304

Query: 232 SKD-----GNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTR 270
             +      + R IE    R   KK+  + DDV                  GSR+IIT+R
Sbjct: 305 LMERASVWDSYRGIEMIKRRSRLKKILHILDDVDDKKQLEFFAAEPGWFGPGSRIIITSR 364

Query: 271 DKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLAL 330
           D  VL      K Y  ++L   DA  LF Q AF  D  D   +EL+ + + YA G+PLA+
Sbjct: 365 DTNVLTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPDEDFVELSKQVVGYANGLPLAI 424

Query: 331 KVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEH 390
           +V+G +L  RS   W  A+ ++  IP  +I +VL+IS+D L +S K +FLDIACFL G  
Sbjct: 425 EVIGSFLYARSIPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDKKIFLDIACFLMGFK 484

Query: 391 RDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGK 437
            D +  I ++              +SLI++    ++ MH+LL+ MG+EIVR ES   PG+
Sbjct: 485 IDRITRILESRGFHAGIGIPVLIERSLISVSR-DQVWMHNLLQIMGKEIVRCESPEEPGR 543

Query: 438 RNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN 497
           R+RLW ++D+   L  +TG E IE I LDM  + +E   N  AFSKM KLR L+     N
Sbjct: 544 RSRLWTYEDVCLALMDSTGKEKIEAIFLDMPGI-KEAQWNMEAFSKMSKLRLLKI----N 598

Query: 498 KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD-------- 547
              +S        ++R LEW   P K+L   +  ++LV L M  +++EQLW         
Sbjct: 599 NVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSRIEQLWYGCKSAVNL 658

Query: 548 DVQRLPSSLCTFKT------PITFEII--DCKMLERLPDEL---ENLEYLTVKG-TTIRE 595
            +  L +SL   KT      P    +I   C  L  +   L   + LEY+T+    +IR 
Sbjct: 659 KIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRI 718

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC--ERLQTLPELPCNLGL 653
           LP +L  +  +K  IL   S LE+ P+ + +++KLT L +      +L +       L +
Sbjct: 719 LPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEV 777

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           LS  NC +LE +P+ +  + S+  ++L  C+ L+  P  L ++
Sbjct: 778 LSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKV 820



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 16/167 (9%)

Query: 574  ERLPD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
            +RLP    L +LE L +    +RE  LPE +G LS +K L LS N N   +PESI  LS 
Sbjct: 864  DRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQN-NFVSLPESINQLSG 922

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
            L  L +  C  L++LPE+P  +  ++   C  L+++P  +   SS        F+ L+  
Sbjct: 923  LEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIKLSSS----KRSEFICLNCW 978

Query: 690  ELSEIVKDGWMKHSLYEE--RGIKK-----SMYFPGNEIPKWFRHQS 729
             L E         ++ E   +G+        +  PGNEIP WF HQ+
Sbjct: 979  ALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQN 1025


>gi|40846341|gb|AAR92462.1| SNC1-like protein [Arabidopsis thaliana]
          Length = 1052

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 258/825 (31%), Positives = 376/825 (45%), Gaps = 140/825 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SFRGED RD+F SHL   L  K+I TFIDD++ R  +I   LL  I+ S IAI+I
Sbjct: 12  YDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPELLSAIKESRIAIVI 70

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
           FS+ YASS W                      F+ VD S V+KQ+  FG+ F        
Sbjct: 71  FSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVFEXTCNANL 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            ++ + WK AL   A ++G+D      E+ +IEE+A DVL++   T       LVG+E  
Sbjct: 131 EDEKQSWKQALAAVAVMAGYDLRKWPNEAAMIEELAEDVLRK-TMTPSDDFGDLVGIEDH 189

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEETG 218
           IE I+S+LC+ S+    + IWG  GI K TI  A+++++S  F   ++         +  
Sbjct: 190 IEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALYSQLSIQFHHRAFVTYKSTSGSDVS 249

Query: 219 GIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT--------------- 260
           G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV                
Sbjct: 250 GMKLSWEKELLSEILSQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWF 309

Query: 261 -SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
            SGSR+I+ T+D+Q LK    +  Y +K      A  + C+ AFG D       +L  K 
Sbjct: 310 GSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFRDLAAKV 369

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
            K A  +PL L VLG  L  RSKE W   + +L+   + +I + L++SY  LD   +++F
Sbjct: 370 AKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQDMF 429

Query: 380 LDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRMHDLLRDMGR 424
             IAC   G    EV SI D                 KSLI +     + MH L+  +  
Sbjct: 430 HYIACLFNGF---EVKSIKDFLGDAVNVNIRLKTLHDKSLIRITPDEIVEMHTLVEKLAT 486

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGI----SLDMNKVNREIHMNSYA 480
           EI R+ES  +PG R  L + ++I  V    TGTE + GI    S D         ++  +
Sbjct: 487 EIDREESKGNPGNRRFLKNAEEILDVFSDKTGTEKLLGIYFSASTDPWNDKPFFSIDENS 546

Query: 481 FSKMPKLRFL------RFYGDKNKCMVSH-LEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
           F  M  L++L       +Y  + +  + + L  +P  +++ L W  CPLK L  N  AE 
Sbjct: 547 FQGMLNLQYLGIHDHSMWYPRETRLRLPNGLVYLP-RKLKWLWWNDCPLKRLPSNFKAEY 605

Query: 532 LVSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFE---IIDCKMLER 575
           LV L M  + +E+LWD  Q L S              +      I  E   I DC++LE 
Sbjct: 606 LVELIMVNSDLEKLWDGTQSLGSLKEMNLRYSTNLKEIPDLSLAINLERLDISDCEVLES 665

Query: 576 LPDEL--ENLEYLTVKG-TTIRELP--------------------------ESLG----- 601
            P  L  E+L YL + G   +R  P                            LG     
Sbjct: 666 FPTPLNSESLAYLNLTGCPNLRNFPAIKMGCSNVDFLQERKIVVKDCFWNKNLLGLDYLD 725

Query: 602 ----------RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PC 649
                     R   +K L L  N+ LE++ E ++ L  L  + +S CE L  +P+L    
Sbjct: 726 CLRRCNPRKFRPEHLKDLTLRGNNKLEKLWEGVQSLESLVTMDLSECENLTEIPDLSKAT 785

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           NL  L   NC SL  LP  + ++  ++   +  C  L++ P  ++
Sbjct: 786 NLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAVN 830



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 30/128 (23%)

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL 600
           K+E+LW+ VQ L S        +T ++ +C+ L  +PD                     L
Sbjct: 750 KLEKLWEGVQSLESL-------VTMDLSECENLTEIPD---------------------L 781

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARN 658
            + + ++ L L+N  +L  +P +I +L KL    +  C  L+ LP      +L +L    
Sbjct: 782 SKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAVNLSSLKILDLGG 841

Query: 659 CTSLEKLP 666
           C+SL   P
Sbjct: 842 CSSLRTFP 849


>gi|357499585|ref|XP_003620081.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
 gi|355495096|gb|AES76299.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
          Length = 1076

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 239/747 (31%), Positives = 374/747 (50%), Gaps = 87/747 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT +L+  L  K I+TFIDD+ L RGD I+ SL   IE S I I 
Sbjct: 20  YDVFLSFRGSDTRYGFTGNLYKDLCRKRIRTFIDDKDLQRGDEITPSLFKAIEESRIFIP 79

Query: 61  IFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFD 120
           I S  YASS   F   +  H+    H F  +         E++++WK ALT+ A+ SG  
Sbjct: 80  ILSINYASSS--FCLDELVHI---IHCFKENGQVNSTDSMERLQKWKMALTQTANFSGHH 134

Query: 121 -SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEG-VCKLR 178
            S     E + IE+I   V +++           VG+E  I E+ SL+ +GS G V  L 
Sbjct: 135 FSPGNGYEYEFIEKIVKYVFRKISCVPLYVADYPVGLESRILEVNSLIDVGSNGKVQMLG 194

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELS----KD 234
           I+G GG+ K T+A AV+N I+  F+G  F   +       G++ LQ+KLLS+L     K 
Sbjct: 195 IYGTGGMGKTTLARAVYNSIADQFDGLCFLNEISANSAKYGLEHLQEKLLSKLVELYVKL 254

Query: 235 GNMRN-IESQLNRLARKKVRIVFDDV----------------TSGSRVIITTRDKQVLKN 277
           G++ + +     RL RKKV ++ DDV                  GSRVI+TTRDK +LK+
Sbjct: 255 GDVNDGVPIIKQRLHRKKVLLILDDVHELKQLQVLAGGLDWFGPGSRVIVTTRDKHLLKS 314

Query: 278 CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYL 337
               + Y + +L+  +A +L     F  + +D++   +   A+ YA G+PLAL+V+G  L
Sbjct: 315 HGIERAYEIPKLIKREALELLRWNTFKNNKVDSNFDGILYCAVTYASGLPLALEVVGSNL 374

Query: 338 CGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISI 397
            G++    +SA+ + E IP  +I+ +LK+S+D+LD+ ++NVFLDIAC   G    E+  I
Sbjct: 375 FGKNIVECKSALYQYERIPIKKIQAILKVSFDALDEDEQNVFLDIACCFNGYELKELEDI 434

Query: 398 FDA--------------SKSLINLDLFYR---IRMHDLLRDMGREIVRKESINHPGKRNR 440
             A               KSLI ++ F+    + +H L+  +G+EIVR+ES+  PGK +R
Sbjct: 435 LHAHYGNSMKYQISVLLEKSLIKINQFWETSYLTLHALMEQIGKEIVRQESLKEPGKCSR 494

Query: 441 LWHHKDIYQVLKKNT--------------------------GTEAIEGISLDMNKVNREI 474
           LW HKDI  VL+++                           G+  IE I L+     +++
Sbjct: 495 LWFHKDIIHVLEESKVNILIFMNGLLLSSVCSFFTNPINVYGSSKIEIIYLEFPSSEQKV 554

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVS 534
               +   ++ K++ L+    KN       +  P   +R LEW + P +        +  
Sbjct: 555 V--DWKGDELKKMQNLKTLIVKNGSFSKGPKYFP-DSIRVLEWHKYPSR---FVPSDIFP 608

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT- 591
            K    K+++       L  ++  F       +  C+ L R+ D   L NLE  + +G  
Sbjct: 609 KKRSVCKLQESDFSSYELCGTMKMFVNMRELNLDKCQFLTRIHDVSNLPNLEIFSFQGCK 668

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-- 649
            + E+  S G L+ ++ L  +  S L R P  ++ +S L  L +S+CE L+T PE+    
Sbjct: 669 NLIEIHRSFGFLNKLEILNATGCSKLMRFP-PMKSMS-LRELMLSYCESLKTFPEILGEV 726

Query: 650 -NLGLLSARNCTSLEKLPAGLSSMSSV 675
            N+  ++  + TS+EKLP    +++ +
Sbjct: 727 KNITYITLTD-TSIEKLPVSFQNLTGL 752


>gi|42566891|ref|NP_193420.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658418|gb|AEE83818.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 253/824 (30%), Positives = 384/824 (46%), Gaps = 134/824 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  +SI TF+D  ++R   I+ +L+  I  + I+I+I
Sbjct: 13  YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIVI 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YASS W                      FY VDPSHVRKQ   FG  F +  +  P
Sbjct: 73  FSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKP 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  ALT+ ++L+G D      E+ ++++IANDV  +L           VG+E  
Sbjct: 133 EDQKQRWVKALTDISNLAGEDLRNGPTEAFMVKKIANDVSNKL-FPLPKGFGDFVGIEDH 191

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEET 217
           I+ I+S+LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         + 
Sbjct: 192 IKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDV 251

Query: 218 GGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT-------------- 260
            G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV               
Sbjct: 252 SGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEW 311

Query: 261 --SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
             SGSR+I+ T+DKQ+LK    +  Y ++      A K+  Q+AFG D       EL  +
Sbjct: 312 FGSGSRIIVITQDKQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFE 371

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
             +    +PL L VLG  L GR K+ W   M +L      +IEE L++ YD L+   + +
Sbjct: 372 VAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNREL 431

Query: 379 FLDIACFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           F  IACF  G           D+V     A KSLI +     I MH+LL  +GREI R +
Sbjct: 432 FKCIACFFNGFKVSNVKELLEDDVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAK 491

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD---MNKVNREIHMNSYAFSKMPKL 487
           S  +P KR  L + +DI +V+ + TGTE + GI +    +      + +N  +F  M  L
Sbjct: 492 SKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNL 551

Query: 488 RFLRFYGDKNKCMVSHL---------EGVPF--AEVRHLEWPQCPLKTL--NICAEKLVS 534
           ++L         + S +         +G+ +   +++ L+W  CPLK+L     AE LV+
Sbjct: 552 QYLEIGHWSEIGLWSEIGLWSKIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVN 611

Query: 535 LKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLPD 578
           L M  +K+E+LW+    L S              +      I  E ++   C+ L  LP 
Sbjct: 612 LIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPS 671

Query: 579 ELE-------------------------NLEYLTVKGTTIRE------LPESLGRLSW-- 605
            ++                         NLEYL+V  +++        LP  L RL W  
Sbjct: 672 SIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDY 731

Query: 606 --VKRL-----------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE--LPCN 650
             VKRL           +   NS+LE++ +  + L  L  +++   + L+ +P+  L  N
Sbjct: 732 CPVKRLPSNFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAIN 791

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           L  L    C SL  LP+ + + + ++ +++  C  L+  P +L+
Sbjct: 792 LERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDLN 835



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)

Query: 534  SLKMPCTKVEQLWDDVQ-RLPSSLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKG 590
            ++KM C+  E L D  +  +         P   + +DC ++  +P E   E L +L V G
Sbjct: 855  AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYLDC-LMRCMPCEFRPEYLTFLDVSG 913

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                +L E +  L  +KR+ LS + NL  IP+ +   + L  L+++ C+ L TLP    N
Sbjct: 914  CKHEKLWEGIQSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGN 972

Query: 651  LG---LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
            L     L  + CT LE LP  + ++SS++ ++L  C+ L+  P
Sbjct: 973  LHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFP 1014



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 15/166 (9%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E L  L +   K E+LW+ +Q    SL + K     ++ + + L  +PD  +  NL+ L 
Sbjct: 904  EYLTFLDVSGCKHEKLWEGIQ----SLGSLKR---MDLSESENLTEIPDLSKATNLKRLY 956

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            + G  ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 957  LNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPL 1015

Query: 647  LPCNLGLLSARNCTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            +   +  L   N T++E++P  +  ++  SVL +  C  LK + PN
Sbjct: 1016 ISTRIECLYLEN-TAIEEVPCCIEDLTRLSVLLMYCCQRLKNISPN 1060


>gi|297794605|ref|XP_002865187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311022|gb|EFH41446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1162

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 234/756 (30%), Positives = 383/756 (50%), Gaps = 88/756 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF GED R  F SH    L  K I  F D+++ R  ++   L   I  S IA++
Sbjct: 12  VYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRTSRIAVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE+Y SS W                      FY +DPSH RKQ+  FG  F +  +R 
Sbjct: 72  VFSEKYPSSSWCLDELLEIVRCKEELGQLVIPVFYGLDPSHARKQTGKFGEAFVKTCQRK 131

Query: 100 PE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E + K W+ +LT+ A++ G+ S     E+++IE IAN+VL +L++   +  K  VG+E 
Sbjct: 132 TEDETKLWRQSLTDVANVLGYHSQNWPNEAQMIEAIANNVLGKLNSIPTNDFKDFVGMED 191

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA---------- 208
            I ++ +LL + S+ V  + IWG  GI K +IA  +++++S  F+ S F           
Sbjct: 192 HIAKMSALLHLESKEVRMVGIWGSSGIGKTSIARVLYSRLSHRFQSSVFVDRAFISKSTE 251

Query: 209 -LNVREAEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---- 261
             N   +++      LQK  LS++   KD  + ++ +   RL   KV I  DD+      
Sbjct: 252 IYNSANSDDYNMKLHLQKVFLSKILDKKDIKIHHLGAVEERLKHHKVLIFIDDLDDQVVL 311

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+I+ T+DK  L+       Y +       A K+FC+ AF  ++  
Sbjct: 312 DTLAGLTQWFGYGSRIIVITKDKHFLRAHGIEYIYNVCLPSNELALKIFCRSAFRKNYPP 371

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
              +EL  +    A  +PL L VLG +L GR KE     + +L      +IE+ L++SY+
Sbjct: 372 DGLMELASEVALCAGNLPLGLNVLGSHLRGRDKEDLMDMLPRLRNGLDGKIEKTLRVSYN 431

Query: 370 SLDDSQ-KNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRMH 416
            L++ + K +F  IAC   GE  D++  +   S        K+L++  L +     + MH
Sbjct: 432 GLNNQKDKAIFRHIACLFNGEKVDDIKLLLADSGLDVNIGLKNLVDKSLIHVREEIVEMH 491

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL++MG+EIVR +S N PG+R  L   KDI  +L+ +TGT+ + GI+LDM++++ E+H+
Sbjct: 492 SLLQEMGKEIVRSQS-NEPGEREFLMDAKDICDLLEDSTGTKKVLGITLDMDEID-ELHI 549

Query: 477 NSYAFSKMPKLRFLRFYG---DKNKCMVSHL-EGVPFA--EVRHLEWPQCPLKTL--NIC 528
           +  AF  M  L FL+ Y    DK   +  HL +G  +   ++R L     P++ +     
Sbjct: 550 HENAFKGMHNLLFLKVYTKKWDKKTEVRWHLPKGFNYLPHKLRFLRLDGYPMRCMPSKFR 609

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
            E LV L+M  +K+E+LW+ V        +F+     ++   + L+ +PD     +L+ L
Sbjct: 610 PENLVKLEMSGSKLERLWEGVH-------SFRGLRDIDLQKSENLKEIPDLSMATSLKTL 662

Query: 587 TV-KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +   + + ELP S+  L+ +++L +S   NLE +P  I +L  L  L +  C RL+  P
Sbjct: 663 NLCDCSNLVELPLSIQYLNKLEKLEMSGCINLENLPIGI-NLKSLGRLNLGGCSRLKIFP 721

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC 681
           ++  N+  L   + T +E  P+ L   +  L+++LC
Sbjct: 722 DISTNISWL-ILDETGIETFPSNLPLEN--LFLHLC 754


>gi|30692215|ref|NP_850655.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644403|gb|AEE77924.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1240

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 260/930 (27%), Positives = 411/930 (44%), Gaps = 194/930 (20%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 94   HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 153

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
             S +YASS W                      FY V+P+ ++KQ+  FG+ F++  R + 
Sbjct: 154  LSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGKP 213

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
             E+++RW+ AL + A ++G+ S+  R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 214  KEQVERWRKALEDVATIAGYHSHSWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMRA 273

Query: 159  SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
             ++ +E LL +  + V  + IWG  GI K TIA  + N++S  F+ S   +N++      
Sbjct: 274  HMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRP 333

Query: 215  --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
              +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 334  CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 393

Query: 262  -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                   GSR+IITT D  VLK    N  Y+++     +A ++FC  AFG         E
Sbjct: 394  ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDE 453

Query: 315  LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
            +  +    A  +PL LKVLG  L G+SK  WE  + +L      +I  +++ SYD+L D 
Sbjct: 454  IAWEVKALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGGIIQFSYDALCDE 513

Query: 375  QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLD------------LF 410
             K +FL IAC   GE   +V  +              A KSLI+ D            L 
Sbjct: 514  DKYLFLYIACLFNGESTTKVKELLGKFLDVRQGLHVLAQKSLISFDEEISWKQIVQVLLL 573

Query: 411  YR--------------IRMHDLLRDMGREIVRKESINHPGKRNRLW-HHKDIYQVLKKN- 454
             +              IRMH LL   GRE  RK+ ++H   +++L    +DI +VL  + 
Sbjct: 574  NKFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDICEVLDDDT 633

Query: 455  TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---- 510
            T      GI+LD+ K   E++++  A  ++   +F++     N       E V  A    
Sbjct: 634  TDNRRFIGINLDLYKNEEELNISEKALERIHDFQFVKI----NYVFTHQPERVQLALEDL 689

Query: 511  -----EVRHLEWPQCPLKTLNIC------AEKLVSLKMPCTKVEQLWD------------ 547
                  +R L+W        NIC       E LV L M C+K+ +LW+            
Sbjct: 690  IYHSPRIRSLKW----FPYQNICLPSTFNPEFLVELDMRCSKLRKLWEGTKQLRNLKWMD 745

Query: 548  -----DVQRLPSSLCTFKTPITFEIIDCKMLERLP------------------------- 577
                 D++ LPSS+    +    ++ DC  L +LP                         
Sbjct: 746  LSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINANNLQGLSLTNCSRVVKLPAI 805

Query: 578  DELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
            + + NL  L ++  +++ ELP S+G  + + +L +   S+L ++P SI  ++ L    +S
Sbjct: 806  ENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLS 865

Query: 637  HCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMS-SVLYVNLCNFLKLDP---N 689
            +C  L  LP    NL    +L  R C+ LE LP  ++ +S  +L +  C+ LK  P    
Sbjct: 866  NCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKSFPEIST 925

Query: 690  ELSEIVKDG------------WMKHSLYEERGIKKSMYFPG---------------NEIP 722
             +SE+   G            W + ++YE    +    FP                 E+P
Sbjct: 926  HISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVP 985

Query: 723  KWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
             W +  S       + R  R    N L+S 
Sbjct: 986  PWVKRMS-------RLRALRLNNCNSLVSL 1008



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 42/221 (19%)

Query: 530  EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL  L+M  C+K+E L       P+++      I  ++ DC  L+  P+   ++  L +
Sbjct: 881  QKLFMLRMRGCSKLETL-------PTNINLISLRI-LDLTDCSQLKSFPEISTHISELRL 932

Query: 589  KGTTIRELPESLG--------RLSWVKRL------------ILSNNSNLERIPESIRHLS 628
            KGT I+E+P S+          +S+ + L            +L  + +++ +P  ++ +S
Sbjct: 933  KGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMS 992

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            +L  L +++C  L +LP+LP +L  + A NC SLE+L    ++    LY   C       
Sbjct: 993  RLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKC------- 1045

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQS 729
             +L++  +D  M  S       +K    P  ++P  F H++
Sbjct: 1046 FKLNQEARDLIMHTS------TRKYAMLPSIQVPACFNHRA 1080


>gi|15230461|ref|NP_190049.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|30692207|ref|NP_850654.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6967111|emb|CAB72465.1| disease resistance protein homolog [Arabidopsis thaliana]
 gi|28973753|gb|AAO64192.1| putative disease resistance protein homolog [Arabidopsis thaliana]
 gi|332644404|gb|AEE77925.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644405|gb|AEE77926.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1214

 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 260/930 (27%), Positives = 411/930 (44%), Gaps = 194/930 (20%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 94   HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 153

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
             S +YASS W                      FY V+P+ ++KQ+  FG+ F++  R + 
Sbjct: 154  LSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGKP 213

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
             E+++RW+ AL + A ++G+ S+  R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 214  KEQVERWRKALEDVATIAGYHSHSWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMRA 273

Query: 159  SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
             ++ +E LL +  + V  + IWG  GI K TIA  + N++S  F+ S   +N++      
Sbjct: 274  HMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRP 333

Query: 215  --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
              +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 334  CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 393

Query: 262  -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                   GSR+IITT D  VLK    N  Y+++     +A ++FC  AFG         E
Sbjct: 394  ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDE 453

Query: 315  LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
            +  +    A  +PL LKVLG  L G+SK  WE  + +L      +I  +++ SYD+L D 
Sbjct: 454  IAWEVKALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGGIIQFSYDALCDE 513

Query: 375  QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLD------------LF 410
             K +FL IAC   GE   +V  +              A KSLI+ D            L 
Sbjct: 514  DKYLFLYIACLFNGESTTKVKELLGKFLDVRQGLHVLAQKSLISFDEEISWKQIVQVLLL 573

Query: 411  YR--------------IRMHDLLRDMGREIVRKESINHPGKRNRLW-HHKDIYQVLKKN- 454
             +              IRMH LL   GRE  RK+ ++H   +++L    +DI +VL  + 
Sbjct: 574  NKFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDICEVLDDDT 633

Query: 455  TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---- 510
            T      GI+LD+ K   E++++  A  ++   +F++     N       E V  A    
Sbjct: 634  TDNRRFIGINLDLYKNEEELNISEKALERIHDFQFVKI----NYVFTHQPERVQLALEDL 689

Query: 511  -----EVRHLEWPQCPLKTLNIC------AEKLVSLKMPCTKVEQLWD------------ 547
                  +R L+W        NIC       E LV L M C+K+ +LW+            
Sbjct: 690  IYHSPRIRSLKW----FPYQNICLPSTFNPEFLVELDMRCSKLRKLWEGTKQLRNLKWMD 745

Query: 548  -----DVQRLPSSLCTFKTPITFEIIDCKMLERLP------------------------- 577
                 D++ LPSS+    +    ++ DC  L +LP                         
Sbjct: 746  LSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINANNLQGLSLTNCSRVVKLPAI 805

Query: 578  DELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
            + + NL  L ++  +++ ELP S+G  + + +L +   S+L ++P SI  ++ L    +S
Sbjct: 806  ENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLS 865

Query: 637  HCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMS-SVLYVNLCNFLKLDP---N 689
            +C  L  LP    NL    +L  R C+ LE LP  ++ +S  +L +  C+ LK  P    
Sbjct: 866  NCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKSFPEIST 925

Query: 690  ELSEIVKDG------------WMKHSLYEERGIKKSMYFPG---------------NEIP 722
             +SE+   G            W + ++YE    +    FP                 E+P
Sbjct: 926  HISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVP 985

Query: 723  KWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
             W +  S       + R  R    N L+S 
Sbjct: 986  PWVKRMS-------RLRALRLNNCNSLVSL 1008



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 42/221 (19%)

Query: 530  EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL  L+M  C+K+E L       P+++      I  ++ DC  L+  P+   ++  L +
Sbjct: 881  QKLFMLRMRGCSKLETL-------PTNINLISLRI-LDLTDCSQLKSFPEISTHISELRL 932

Query: 589  KGTTIRELPESLG--------RLSWVKRL------------ILSNNSNLERIPESIRHLS 628
            KGT I+E+P S+          +S+ + L            +L  + +++ +P  ++ +S
Sbjct: 933  KGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMS 992

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            +L  L +++C  L +LP+LP +L  + A NC SLE+L    ++    LY   C  L  + 
Sbjct: 993  RLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEA 1052

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQS 729
             +L        + H+       +K    P  ++P  F H++
Sbjct: 1053 RDL--------IMHT-----STRKYAMLPSIQVPACFNHRA 1080


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 229/749 (30%), Positives = 373/749 (49%), Gaps = 106/749 (14%)

Query: 28  KSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW---------------- 71
           K I TF  D+ IRG++++ +L   IE S    ++ S+ +A SRW                
Sbjct: 221 KGIHTFRLDE-IRGEDVASALFKAIEKSRCIFVVLSKCFAHSRWCLDELERIMECRNQNG 279

Query: 72  -----FFYRVDPSHVRKQSHSFGRHFSRLRKR--FPEKMKRWKNALTEAADLSGFDSNVI 124
                 FY VDPS VRKQ   +G   ++   R  F  K +RW+ AL E  +LSG+     
Sbjct: 280 KVVLPVFYHVDPSDVRKQEGWYGEALAQHESRNIFGHKTQRWRAALREVGNLSGWHVQN- 338

Query: 125 RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE----SLLCIGSEGVCKLRIW 180
             E   IE+I   +L R        +K L+G++  +EE+E     ++   S  V  + I+
Sbjct: 339 GSEVDYIEDITCVILMRFSHKLLHVDKNLIGMDYHLEEMEEIFPQMMDSISNDVRMVGIY 398

Query: 181 GIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG-----------IKDLQKKLLS 229
           G+GGI K TIA  ++N+IS  F  + F  N +E  ++ G           I   +K  +S
Sbjct: 399 GLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQKQLLHDILPRRKNFIS 458

Query: 230 ELSKDGNM--------RNIESQLNRLARKKVRIVFDD---VTSGSRVIITTRDKQVLKNC 278
            + +  +M        + +    +     ++  +  D      GSR+I+TTRDK +L+  
Sbjct: 459 TVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRIIVTTRDKHLLEVH 518

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
             +  Y  K+L + +  +LFC  AF  +H    +  +++  + Y  G+PL LKVLGC+L 
Sbjct: 519 EVDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYETVSNFVVHYVNGLPLGLKVLGCFLY 578

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
           G++   WES + KLE  P+ EI+ VLK SYD LD +Q ++FLD+ACF  GE +D V  I 
Sbjct: 579 GKTIRQWESELHKLEWEPNQEIQCVLKRSYDELDCTQ-HIFLDVACFFNGEDKDSVTRIL 637

Query: 399 DA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHK 445
           +A              K LI++ +  +I MHDLL+ MG+ IV +E    PGK +RLW   
Sbjct: 638 EACKFYAESGMRVLGDKCLISI-VDNKIWMHDLLQQMGQHIVGQEFPEEPGKWSRLWF-- 694

Query: 446 DIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLE 505
                   + GTEAI+GI L+++ + + IH+ + +F+ M  L  L+ Y D     +    
Sbjct: 695 -------PDVGTEAIKGILLNLS-IPKPIHVTTESFAMMKNLSLLKIYSDYEFASMREHS 746

Query: 506 GVPFA--------EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSS 555
            V  +        E+R+L W   PL++L  +  AE LV L M  + ++QLW+    L   
Sbjct: 747 KVKLSKDFEFSSYELRYLYWQGYPLESLPSSFYAEDLVELDMCYSSLKQLWESDMLL--- 803

Query: 556 LCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVKRLIL 611
               +   T  +  C+ L  +PD      NLE LT+ G +++ ++  S+G+LS   +LIL
Sbjct: 804 ----EKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLS---KLIL 856

Query: 612 SNNSNLERIPE--SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPA 667
            N  N +++    SI ++  L  L +S C  L+  P++  N+  L       T++E+LP+
Sbjct: 857 LNLKNCKKLRSFLSIINMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPS 916

Query: 668 GLSSMSSVLYVNL--CNFLKLDPNELSEI 694
            +  ++ ++ ++L  C  LK  P  + ++
Sbjct: 917 SVEHLTGLVLLDLKRCKNLKSLPTSVCKL 945



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 43/233 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDT   F  HL+  L+ K ++TF D ++L RG++I+  LL  IE S I +I
Sbjct: 23  YDVFLSFMGEDTCHKFADHLYRALNQKGVRTFRDNEELGRGEDIAPELLKAIEESRICLI 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +  E YA S+W                      FY V+P HVR Q+ S+   F    K  
Sbjct: 83  VLLENYARSKWCLDELAKIMDCRQKMAKLVFPIFYHVEPFHVRGQTGSYEEAFEMHEKNA 142

Query: 100 P----EKMKRWKNALTEAADLSGFDSNVIR--PESKLIEEIANDVLKRLDATFQSKNKGL 153
                +K++RW+ ALT  A++SG+   +++  PE+ +IEEI + V K L+  F    K L
Sbjct: 143 DQEGMQKIQRWRKALTMVANISGW---ILQNGPEAHVIEEITSTVWKSLNQEFLHVEKNL 199

Query: 154 VGVECSIEEIESLLC--IGS----EGVCKLRIWGIGGISKITIAGAVFNKISR 200
           VG++   +   S  C  IGS    +G+   R+  I G     +A A+F  I +
Sbjct: 200 VGMD---QRRASSTCTSIGSWDYEKGIHTFRLDEIRGED---VASALFKAIEK 246



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 54/322 (16%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPS    F +    ++ DCK++E                     +P S+  L  +K+L 
Sbjct: 1102 RLPSGFSCFMSFTNLDLSDCKLIEG-------------------AIPNSICSLISLKKLD 1142

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N  L   P  I  L+ L  L +   + L  +P+LP ++  +   NCT+L   P+ L 
Sbjct: 1143 LSRNDFLS-TPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTALLPGPSSLR 1201

Query: 671  SMSSVL----YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFR 726
            +   V+    Y +  + +      +S +     +   L+E   I  S+ FPG+ IP+W  
Sbjct: 1202 TNPVVIRGMKYKDF-HIIVSSTASVSSLTTSPVLMQKLFE--NIAFSIVFPGSGIPEWIW 1258

Query: 727  HQSMGSSATLKTRPPRPAGYNKLISFAFCAVV-VFPAFLKYFRHKSGEDDWDGNVYAVCC 785
            HQS+GSS  +K   P     +  + FA C+V+   P   +   H + +  + G++     
Sbjct: 1259 HQSVGSS--IKIELPTDWYNDDFLGFALCSVLEQLPE--RIICHLNSDVFYYGDL----- 1309

Query: 786  DWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEYFGP----NYDEFSFRIHCSF 838
                K  GH + W   K ++V S+HV+LG   C+      F      N+ E SF     F
Sbjct: 1310 ----KDFGHDFHW---KGNHVGSEHVWLGHQPCSQLRLFQFNDPNDWNHIEISFEAAHRF 1362

Query: 839  HFPPYLERGEVKKCGIHFVYAQ 860
            +         VKKCG+  +Y +
Sbjct: 1363 NSSA---SNVVKKCGVCLIYTE 1381



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 6/110 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  ++        C  LE  P+   ++ENL+ L + GT+I  LP S+ RL 
Sbjct: 934  NLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLK 993

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
             +  L L N  NL  +P+ +  L+ L  L +S C +L  LP+   NLG L
Sbjct: 994  VLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPK---NLGSL 1040


>gi|13509215|emb|CAC35327.1| N1-A protein [Linum usitatissimum]
          Length = 1008

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 228/786 (29%), Positives = 378/786 (48%), Gaps = 121/786 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L    I+TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 30  YEVFLSFRGPDVRQTFADHLYTSLVRSKIRTFRDEEGLQKGETIGPSLIQAITESKIYIP 89

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           FY +DP  VR   S  +   F 
Sbjct: 90  ILTQNYASSKWCLQELAKMVNCWKNGGEAKGQHIIIPVFYFMDPRDVRHPDSGPYKESFE 149

Query: 94  RLR-KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +   K  PE +  WK A  E   + G+  + +  +  ++++I  DV   L A +      
Sbjct: 150 QHNLKHDPETILEWKGAPQEVGKMKGWHISELTGQGAVVDKIFTDVELHLRANYTLATDE 209

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           LVG++ S+EE+  LL + S     + I+G+GG+ K T+A AV+NK+S  FE   F  N+R
Sbjct: 210 LVGIDFSVEEVVKLLNLDSTSEKIIGIYGMGGLGKTTLAKAVYNKVSMQFERCCFLNNIR 269

Query: 213 EAE-ETGGIKDLQKKLLSE-LSKD-GNMRNIESQLN----RLARKKVRIVFDDV------ 259
           EA  +  G+  LQ K++S+ L KD G  +N    +     R++R K+ +V DDV      
Sbjct: 270 EALLKNDGVVALQNKVISDILRKDFGQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRF 329

Query: 260 ----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                     ++ SR ++TTRD + L+     K ++ + + +  + KLF + AFG D+  
Sbjct: 330 DDIFGKLTAFSADSRFLVTTRDARTLERLRGCKLFKHEGMSHDHSLKLFSKHAFGVDYPP 389

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             +  L ++ ++   G+PLALKV+G  L    K  WE  + +L+ IP VE+++ LKISY+
Sbjct: 390 EDYASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWEDKLIELKAIPAVEVQDRLKISYN 449

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L D++K +FLD+ACF  G  ++  + ++                +SL+ ++      MH
Sbjct: 450 ELTDNEKQIFLDVACFFVGAKKEIPMYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMH 509

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           D +RD+GR IVR+ES N P KR+R+W + D   +LK   G + +E + +DM        +
Sbjct: 510 DHIRDLGRAIVREESQN-PYKRSRIWSNNDAIDILKNREGNDCVEALRVDMR--GEGFAL 566

Query: 477 NSYAFSKMPKLRFLR-FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
               F +  +LRFL    GD +    + L  + +  V H + P+     LN    KL+ L
Sbjct: 567 TDEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWLRVYHGD-PRPSGLNLN----KLMIL 621

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----------------- 578
           ++  + V   W+    + ++           ++ CK LE++PD                 
Sbjct: 622 ELEVSDVTDSWEGWNEIKAA----GKLKVVHLMCCKGLEKVPDLSTCRGLELLRFSICRR 677

Query: 579 --------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
                     ++L+ L +  T I  L   +  L  +++L +  +S L  +P  I  LS L
Sbjct: 678 MHGELDIGNFKDLKVLDIFQTRITALKGQVESLQNLQQLDVG-SSGLIEVPAGISKLSSL 736

Query: 631 TFLFISHC--ERLQTLPE--------------LPCNLGLLSARNCTSLEKLPAGLSSMSS 674
            +L +++   ++++TLP               LP +L  L  R  T+L +LP  L+S+++
Sbjct: 737 EYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLFRLDVRYSTNLRRLP-NLASVTN 795

Query: 675 VLYVNL 680
           +  + L
Sbjct: 796 LTRLRL 801


>gi|8843883|dbj|BAA97409.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1018

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 260/920 (28%), Positives = 423/920 (45%), Gaps = 172/920 (18%)

Query: 78  PSHVRKQSHSFGRHFSRLRKRFPEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIAN 136
           P+ V+KQS  FG+ F +  +   E++K RW+NAL   A ++G  S     E+K+I++IA 
Sbjct: 67  PADVKKQSGVFGKAFEKTCQGKNEEVKIRWRNALAHVATIAGEHSLNWDNEAKMIQKIAT 126

Query: 137 DVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFN 196
           DV  +L+ T     +G+VG+E  ++ + SLLC+ S+ V  + IWG  GI K TIA A+F+
Sbjct: 127 DVSDKLNLTPSRDFEGMVGMEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARALFD 186

Query: 197 -KISRHFEGSYFALNVREAEETGGIKD------LQKKLLSELSKDGNMR--NIESQLNRL 247
            ++S  F+   F  N++ +    G+ D      LQK+LLS++ K+ NM+  ++ +   RL
Sbjct: 187 DRLSSSFQHKCFMGNLKGS--IKGVADHDSKLRLQKQLLSKIFKEENMKIHHLGAIRERL 244

Query: 248 ARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVY 291
             ++V I+ DDV                 SGSR+I TT DK++LK    +  YR+     
Sbjct: 245 HDQRVLIILDDVDDLKQLEVLAKEISWFGSGSRIIGTTEDKKILKAHGIHNIYRVDFPSK 304

Query: 292 ADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRK 351
            DA ++ C  AF    +     EL +K  K    +PL L V+G  L G   + WE  + +
Sbjct: 305 KDALEILCLSAFKQSSIPDGFEELANKVAKLCSNLPLGLCVVGASLRGEGNQEWERLLSR 364

Query: 352 LEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD------------ 399
           +E     +I+++L+I YD L  + K++FL IACF      D V ++              
Sbjct: 365 IESSLDRDIDDILRIGYDRLLTNDKSLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNT 424

Query: 400 -ASKSLINLDL---FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
            A +SLIN      + RI MH LL+ +GR+IV ++S   PGKR  +   ++I  VL   T
Sbjct: 425 LADRSLINFSCILPYGRIEMHHLLQQLGRQIVLEQS-KEPGKREFIIEPEEIRDVLTNET 483

Query: 456 GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY----GDKNKCMVSHLEGVPFAE 511
           GT ++ GIS D + +  E+ ++  AF  M  LRFLR Y    G+    +   ++ +P   
Sbjct: 484 GTGSVIGISFDTSNIG-EVSVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP--R 540

Query: 512 VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS--------------- 554
           +R L W + P K+L      E+LV L MP + +E LW  ++ LP+               
Sbjct: 541 LRLLYWDRYPRKSLPRRFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEI 600

Query: 555 ------------------SLCTFKTPIT----FEIID---CKMLERLPD--ELENLEYLT 587
                             SL    + I+     EI+D   C ML+ +P    L +LE L 
Sbjct: 601 PNLSKATNLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLD 660

Query: 588 VKGTT---------------------IRELPESLGRLSWVKRLILSN------------- 613
           V G +                     I ++P S+G  S + +L +S+             
Sbjct: 661 VSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPCI 720

Query: 614 ------NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA 667
                  S +ERI + +  L++L +L +  C +L+++  LP +L +L A +C SL+++  
Sbjct: 721 TLLSLRGSGIERITDCVIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRVRF 780

Query: 668 GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
              +    L  N C  LKLD     E  K G +      +R + + +  P  +IP+ F H
Sbjct: 781 SFHNPMHTLDFNNC--LKLD-----EEAKRGII------QRSVSRYICLPCKKIPEEFTH 827

Query: 728 QSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDW 787
           ++ G S T+   P   +  ++  +    ++++ P         S      G V   CC+ 
Sbjct: 828 KATGKSITIPLAPGTLSASSRFKA----SILILPVESYETEGISCSIRTKGGVEVHCCE- 882

Query: 788 KRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYF--GPNYDEFSFRI-HCSFHFPPYL 844
                  L   FL     V S+H+F+    F G+ F  G  Y E    +   +F F    
Sbjct: 883 -------LPYHFL----RVRSEHLFI----FHGDLFPQGNKYHEVDVTMSEITFEFSHTK 927

Query: 845 ERGEVKKCGIHFVYAQDSAD 864
              ++ +CG+  +      D
Sbjct: 928 IGDKIIECGVQIMTEGAEGD 947


>gi|82542049|gb|ABB82032.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 509

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 267/498 (53%), Gaps = 66/498 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS  LL  I+ S I+I+
Sbjct: 15  YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAIQESKISIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS VRKQ+ SF   F +  +R
Sbjct: 75  VFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSDVRKQTGSFAEPFDKHEER 134

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA  LSG++ N +    E+K I+EI  DVL +LD  +    + L+G
Sbjct: 135 FEEKLVKEWRKALEEAGKLSGWNLNDMANGHEAKFIKEIIKDVLNKLDPKYLYVPEDLIG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           +      I   L   ++ V  + I G+ GI K TIA  VFN++   FEGS F  N+ EA 
Sbjct: 195 MHRLARNIFDFLSTATDDVRIVGIHGMPGIGKTTIAQVVFNQLCNGFEGSCFLSNINEAS 254

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQ++LL ++ K    N+  ++        RL RK+V +V DDV         
Sbjct: 255 KQFNGLALLQEQLLYDILKQDVANINCVDRGKVLIKERLCRKRVLVVADDVAHQDQLNAL 314

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  +L+   A++  R++EL   +A +LF   AF        +
Sbjct: 315 MGERSWFGPGSRVIITTRDSNLLRE--ADQTNRIEELEPDEALQLFSWHAFKDTKPAKDY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+ KA+ Y  G+PLAL V+G  L  +++  WES +  L  IP+ +I+  L  SY +LD
Sbjct: 373 IELSKKAVDYCGGLPLALNVIGALLYRKNRVTWESEIDNLSRIPNQDIQGKLLTSYHALD 432

Query: 373 DSQKNVFLDIACFLEGEHRD--------------EVISIFDASKSLINLDLFYRIRMHDL 418
              +  FLDIACF  G  ++              EV+      +S+I + L   + MHDL
Sbjct: 433 GELQRAFLDIACFFIGREKEYVAKQLGDRCGYNPEVVLETLHERSMIKV-LGETVTMHDL 491

Query: 419 LRDMGREIVRKESINHPG 436
           LRDMGRE+VR+ S   PG
Sbjct: 492 LRDMGREVVRESSPKEPG 509


>gi|15242954|ref|NP_200620.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332009616|gb|AED96999.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 231/768 (30%), Positives = 377/768 (49%), Gaps = 88/768 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF +F G D R  F SHL    S   I  F D  + R   I  +L G I+ S I+I++
Sbjct: 15  YRVFTNFHGPDVRKTFLSHLRKQFSYNGISMFNDQSIERSQTIVPALTGAIKESRISIVV 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASSRW                      FY VDPS VRKQ+  FG  F++    + 
Sbjct: 75  LSKNYASSRWCLDELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGIAFNKTCEGKT 134

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  AL +  +++G        E+K+IE+IA DV  +L+AT     + +VG+E  
Sbjct: 135 NEETQKWSKALNDVGNIAGEHFFNWDNEAKMIEKIARDVSNKLNATISWDFEDMVGIEAH 194

Query: 160 IEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           +++++SLL +  E G   + I+G  GI K TIA A+ +++S  F+ + F  N+R +  +G
Sbjct: 195 LQKMQSLLHLDYEDGAMIVGIYGPAGIGKTTIARALHSRLSSSFQLTCFMENIRGSYNSG 254

Query: 219 ----GIK-DLQKKLLSE-LSKDG-NMRNIESQLNRLARKKVRIVFDDVTS---------- 261
               G+K  LQ++LLS+ L+ DG  + ++ +   RL  +KV I+ DDV            
Sbjct: 255 LDEYGLKLRLQEQLLSKVLNHDGIRINHLGAIPERLCDQKVLIILDDVDDLQQLEALANE 314

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT D+++L+    NKKY +      +A K+FC +AF          +L
Sbjct: 315 TNWFGPGSRIIVTTEDQELLEQHDVNKKYHVDFPTREEACKIFCTYAFRRSFAPYGFEKL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            ++       +PL L+V+G  L G+ ++ WE  +R+LE     +I+ VL++ YD L +  
Sbjct: 375 AERVTWLCSNLPLGLRVMGSTLRGKKEDDWEGILRRLENSLDRKIDGVLRVGYDHLCEDD 434

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           + ++L IA F      D V ++               A KSLI +     I MH LL+ +
Sbjct: 435 QFLYLLIAFFFNYVDDDHVKAMLVEDNLDVKLGLKTLAYKSLIQISAEGNIVMHKLLQRV 494

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GRE ++++    P KR  L   ++I  VL+   GT  + GIS D + ++ E+ ++  AF 
Sbjct: 495 GREAIQRQ---EPTKRRILIDAREICDVLRYGKGTSNVSGISFDTSDMS-EVTISDDAFK 550

Query: 483 KMPKLRFLRF----YGDKNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSL 535
           ++  LRFL+     Y  K +  +    G+ F   +R L W   P K L      E LV L
Sbjct: 551 RLHDLRFLKVTKSRYDGKYRMHIP--AGIEFPCLLRLLHWEAYPSKCLPPTFNPEFLVEL 608

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TT 592
            M  +++E LW   Q L       +     ++     L+ LPD     NLE L +    +
Sbjct: 609 NMQGSQLEHLWSGTQSL-------RNLKNMDLGWSPNLKELPDLTNATNLEDLNLNSCES 661

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + E+P S   L  +K L +S   NL+ IP  + +L  L  + ++ C R + +P +  ++ 
Sbjct: 662 LVEIPSSFSHLHKLKNLWMSYCINLQVIPAHM-NLVSLERVTMTGCSRFRKIPVISTHIN 720

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLC---NFLKLD--PNELSEIV 695
            L   + T  E + A ++    + Y+N+    NF+ L   P  L++++
Sbjct: 721 YLDIAHNTEFEVVHASIALWCRLHYLNMSYNENFMGLTHLPMSLTQLI 768



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSS 674
           S++ERIP+ I+ L +L  L ++ C RL +LPELP +L  L A +C SLE + + L +  +
Sbjct: 772 SDIERIPDCIKALHQLFSLDLTGCRRLASLPELPGSLLDLEAEDCESLETVFSPLHTPRA 831

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA 734
           +L  N  N  KL                       I K++  PG E+P  F H++ G+S 
Sbjct: 832 LL--NFTNCFKLGGQARR--------AIIRRRSEIIGKAL-LPGREVPAEFDHRAKGNSL 880

Query: 735 TLKTRPPRPAGYNKLISFAFCAVV 758
           T+     RP+ Y+  I +  C V+
Sbjct: 881 TIILNGYRPS-YD-FIQYLVCVVI 902


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
           thaliana]
          Length = 1193

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 248/798 (31%), Positives = 388/798 (48%), Gaps = 122/798 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 41  HDVFPSFHGADVRRTFLSHILESFKRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 100

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S +YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 101 LSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKL 160

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+++RW+ AL + A ++G  S   R E+ +IE+I+ DV   L++   S++  GLVG+  
Sbjct: 161 KEQVERWRKALEDVATIAGEHSRNWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMRA 220

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N++      
Sbjct: 221 HMDRMEHLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRP 280

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 281 CFDEYSAQLQLQNEMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 340

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y+++     +A ++FC  AFG  H +    E
Sbjct: 341 EIQWFGLGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKHPNDGFDE 400

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  +    A  +PL LKVLG  L G SK  WE  + +L      +I  +++ SYD+L D 
Sbjct: 401 IAREVTYLAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFSYDALCDE 460

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFY--RIRMHDLLR 420
            K +FL IAC    E   +V  +              A KSLI+   FY   IRMH LL 
Sbjct: 461 DKYLFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLIS---FYGETIRMHTLLE 517

Query: 421 DMGREIVRKESINHPGKRNRLW-HHKDIYQVLKKN-TGTEAIEGISLDMN----KVNREI 474
             GRE   K+ ++H  ++++L    +DI +VL  + T      GI+LD+     K+N + 
Sbjct: 518 QFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTTDNRRFIGINLDLREEELKINEKT 577

Query: 475 --HMNSYAFSKM---PKLRFLRFYGDKNKCMVSHLEGVPF--AEVRHLEWPQCPLKTLNI 527
              +N + F K+    KL   +      +  ++ LE + +    +R L+W        NI
Sbjct: 578 LERINDFQFVKINLRQKLLHFKIIRQPERVQLA-LEDLIYHSPRIRSLKW----FGYQNI 632

Query: 528 C------AEKLVSLKMPCTKVEQLWD-----------------DVQRLPSSLCTFKTPIT 564
           C       E LV L M  +K+++LW+                 D+Q LP +L T      
Sbjct: 633 CLPSTFNPEFLVELDMRYSKLQKLWEGTKQLRNLKWMDLSYSIDLQELP-NLSTATNLEE 691

Query: 565 FEIIDCKMLERLPDELE---NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERI 620
            ++ +C  L  LP  +E   +L+ L ++G +++ ELP S G  + +K+L L N S+L ++
Sbjct: 692 LKLRNCSSLVELPSSIEKLTSLQRLDLQGCSSLVELP-SFGNATKLKKLDLGNCSSLVKL 750

Query: 621 PESIRHLSKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
           P SI + + L  L + +C R+  LP  E    L  L  +NC+SL +LP  + + +     
Sbjct: 751 PPSI-NANNLQELSLINCSRVVKLPAIENATKLRELKLQNCSSLIELPLSIGTAN----- 804

Query: 679 NLCNFLKLDPNELSEIVK 696
              N  KLD +  S +VK
Sbjct: 805 ---NLWKLDISGCSSLVK 819



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 48/243 (19%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            C+K+E L       P+++      I  ++ DC  L+  P+   +++ L + GT I+E+P 
Sbjct: 862  CSKLETL-------PTNINLISLRI-LDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVPL 913

Query: 599  SLGRLSWVKRLI---------------------LSNNSNLERIPESIRHLSKLTFLFISH 637
            S+  +SW +  +                     L  + +++ +P  ++ +S+L  L +++
Sbjct: 914  SI--MSWSRLAVYKMSYFESLNEFPHALDIITELQLSKDIQEVPPWVKRMSRLRVLRLNN 971

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKD 697
            C  L +LP+L  +L  + A NC SLE+L    ++    LY   C        +L++  +D
Sbjct: 972  CNNLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKC-------FKLNQEARD 1024

Query: 698  GWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTRPPRPAGYNKLISFAFCA 756
              M  S        +    PG ++P  F H++  G S  +K    + +     + F  C 
Sbjct: 1025 LIMHTSTV------RCAMLPGTQVPACFNHRATSGDSLKIKL---KESSLPTTLRFKACI 1075

Query: 757  VVV 759
            ++V
Sbjct: 1076 MLV 1078



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 12/107 (11%)

Query: 569 DCKMLERLPDEL---ENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
           +C  L  LP  +    NL  L + G +++ +LP S+G ++ ++   LSN SNL  +P SI
Sbjct: 789 NCSSLIELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSI 848

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSAR-----NCTSLEKLP 666
            +L KLT L +  C +L+T   LP N+ L+S R     +C+ L+  P
Sbjct: 849 GNLRKLTLLLMRGCSKLET---LPTNINLISLRILDLTDCSRLKSFP 892


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 223/653 (34%), Positives = 331/653 (50%), Gaps = 56/653 (8%)

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLI 131
            FY VDPSHVRKQ  SFG  F+     + +K+  W+ ALTEAA+L+G+       E+  I
Sbjct: 14  IFYHVDPSHVRKQEGSFGAAFAGYEANWKDKVGSWRTALTEAANLAGWHLQDGY-ETDYI 72

Query: 132 EEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIA 191
           +EI N++  RL+         LVG++  ++E+  LL + S  VC + I+G+GGI K TIA
Sbjct: 73  KEITNNIFHRLNCKRFDVGANLVGIDSRVKEVSLLLHMESSDVCIVGIYGVGGIGKTTIA 132

Query: 192 GAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIE------SQLN 245
             ++NK+S  FE   F  N+R    T G+  LQ +LL ++ ++   +NI       S + 
Sbjct: 133 KFIYNKLSCEFEYMSFLENIRGISNTKGLTHLQNQLLGDIREEERSQNINIVDQGASMIE 192

Query: 246 R-LARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKE 288
             L+ K V IV DDV +                GSRVIITTR+K +L     +  Y +K 
Sbjct: 193 TILSSKSVFIVLDDVDNRNQLKALLRHRGWLGKGSRVIITTRNKHLLIEQEVDDLYEVKG 252

Query: 289 LVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESA 348
           L   +A +LF   AF  +   +  I L+ + + Y QG+PLAL+VLG  L   +   WES 
Sbjct: 253 LNTEEACELFSLHAFKQNLPKSDFINLSYRMVYYCQGLPLALEVLGSLLFNMTIPQWESQ 312

Query: 349 MRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------- 400
           + KL   P  EI  VLK SYD LD ++K++ LD+ACFL+GE RD V+ I DA        
Sbjct: 313 LHKLAKEPMAEIHNVLKSSYDGLDRTEKDILLDVACFLKGEKRDSVLRILDACAGIGIQN 372

Query: 401 --SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE 458
              K LI L   ++I MHDL++ M  EIVR+     P K +RLW   DI + L  + G +
Sbjct: 373 LKDKCLITLPYNHKIDMHDLIQQMCWEIVRENFPKEPNKWSRLWDSHDIERALTTSEGIK 432

Query: 459 AIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVR--HLE 516
            +E I LD++K+ R +H NS  FSKM  LR LR +   N  +  + E     EV   + +
Sbjct: 433 GVETIDLDLSKLKR-VHFNSNVFSKMTSLRLLRVHSYVNIFLGCYDEMKEEEEVDPYYEK 491

Query: 517 WPQCPLKTLNICAE----KLVSLKMPCTKVEQLWD-DVQRLPSSLCTFKTPITFEIIDCK 571
                 KT + C+       +   M C     L +  ++  P+S+   ++    +     
Sbjct: 492 IIDSAKKTASKCSRFGKFSEIQGNMRCPWEPYLKEIAIKEHPTSIENSRSFWDLDPCGHS 551

Query: 572 MLERLP---DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
            LE+ P     + +L  L +  T I+ELP S+  L  V+ L LS  S  ++ PE+  ++ 
Sbjct: 552 NLEKFPGIQGNMRSLRLLYLSKTAIKELPGSID-LESVESLDLSYCSKFKKFPENGANMK 610

Query: 629 KLTFLFISHCERLQTLPELPC------NLGLLSARNCTSLEKLPAGLSSMSSV 675
            L  L ++H      + ELP       +L  L    C+  EK PA   +M ++
Sbjct: 611 SLRELDLTH----TAIKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNL 659



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV---KGTTIRELPESLGRLSW 605
           ++ LP S+ + ++ +  ++ +C   E+ P++  N++ L V     T I++LP+S+G L  
Sbjct: 810 IKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLES 869

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLE 663
           +  L LSN S  E+ PE   ++ +L  L++++   ++ LP+   +L L  L   NC+  E
Sbjct: 870 LVELDLSNCSKFEKFPEKGGNMKRLGVLYLTNTA-IKDLPDSIGSLDLVDLDLSNCSQFE 928

Query: 664 KLPAGLSSMSSVLYVNL 680
           K P    SM  +  +NL
Sbjct: 929 KFPELKRSMLELRTLNL 945



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 142/368 (38%), Gaps = 97/368 (26%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+ +    +  ++ +C   E+ P+    +  L  L ++ T I+ELP S+  +S 
Sbjct: 904  IKDLPDSIGSLDL-VDLDLSNCSQFEKFPELKRSMLELRTLNLRRTAIKELPSSIDNVSG 962

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL------------------------ 641
            +  L +S   NL  +P+ I  L  L  L +  C  L                        
Sbjct: 963  LWDLDISECKNLRSLPDDISRLEFLESLILGGCSNLWEGLISNQLRNLGKLNTSQWKMAE 1022

Query: 642  QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
            +TL ELP +L  + A +CTS E L       SS+L+  LC+                W+K
Sbjct: 1023 KTL-ELPSSLERIDAHHCTSKEDL-------SSLLW--LCHL--------------NWLK 1058

Query: 702  HSLYEERGIKKSMYFP-GNEIPKWFRHQSMGSSATLK------------------TRPPR 742
             +  E +  K S   P  + IP+W R+ ++GS  T +                     P 
Sbjct: 1059 SATEELKCWKLSAVIPESSGIPEWIRYDNLGSELTTELPTNWYEDPDLLGFVVSCVYQPI 1118

Query: 743  PAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE---GHLYSWF 799
            P  ++  IS+ F +       L    H +G    D   +   C+ +         ++ W+
Sbjct: 1119 PTSHDPRISYHFSSAFSCELNL----HGNGFGFKDERRFGCRCECQGNFNDMIDQVWVWW 1174

Query: 800  LGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYL-ERGEVKKCGIHFVY 858
              K + +  +H+                   S  I+ SF    Y  +   VKKCGI+ ++
Sbjct: 1175 YPKTA-IPKEHL-----------------HNSTHINASFKSNTYYCDAVNVKKCGINLIF 1216

Query: 859  AQDSADHI 866
            A D  +H+
Sbjct: 1217 AGDQQNHM 1224



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 13/143 (9%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++  P S+   K+     + DC   E  P++   ++NL+ L +K T I++LP+ +G L  
Sbjct: 669 IKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELES 728

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA------RNC 659
           ++ L LS+ S  E+ PE   ++  L  L++++      + +LP ++G L +       NC
Sbjct: 729 LEILDLSDCSKFEKFPEKGGNMKSLGMLYLTN----TAIKDLPNSIGSLESLVELDLSNC 784

Query: 660 TSLEKLPAGLSSMSSVLYVNLCN 682
           +  EK P    +M S+  + L N
Sbjct: 785 SKFEKFPEKGGNMKSLGMLYLTN 807



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 39/191 (20%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP+S+ + ++ +  ++ +C   E+ P++   +++L  L +  T I++LP+S+G L  
Sbjct: 763 IKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLES 822

Query: 606 VKRLILSNNSNLERIPE-----------------------SIRHLSKLTFLFISHCERLQ 642
           +  L LSN S  E+ PE                       SI  L  L  L +S+C + +
Sbjct: 823 LVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNCSKFE 882

Query: 643 TLPELPCN---LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
             PE   N   LG+L   N T+++ LP  + S+         + + LD +  S+  K   
Sbjct: 883 KFPEKGGNMKRLGVLYLTN-TAIKDLPDSIGSL---------DLVDLDLSNCSQFEKFPE 932

Query: 700 MKHSLYEERGI 710
           +K S+ E R +
Sbjct: 933 LKRSMLELRTL 943



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 25/212 (11%)

Query: 491 RFYGDKNKCMVSHLEGVP-----FAEVRHLEWPQCPLKTL--NICAEKLVSLKMP-CTKV 542
           R + D + C  S+LE  P        +R L   +  +K L  +I  E + SL +  C+K 
Sbjct: 540 RSFWDLDPCGHSNLEKFPGIQGNMRSLRLLYLSKTAIKELPGSIDLESVESLDLSYCSKF 599

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELPE 598
                  ++ P +    K+    ++    + E LP  + N E L      K +   + P 
Sbjct: 600 -------KKFPENGANMKSLRELDLTHTAIKE-LPIGISNWESLRTLDLSKCSKFEKFPA 651

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLS 655
             G +  +K L+L NN+ ++  P+SI +L  L  L +S C + +  PE      NL  L 
Sbjct: 652 IQGNMRNLKELLL-NNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLL 710

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            +N T ++ LP G+  + S+  ++L +  K +
Sbjct: 711 LKN-TPIKDLPDGIGELESLEILDLSDCSKFE 741


>gi|297791249|ref|XP_002863509.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309344|gb|EFH39768.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1133

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 290/1096 (26%), Positives = 447/1096 (40%), Gaps = 261/1096 (23%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF+ FRG D R  F SHL  +L    I+ F+D    RG+++ ++LL  IE S IA+ I
Sbjct: 14   HQVFIHFRGRDLRYGFVSHLEKILKDHKIEVFVDSGEDRGEHL-ENLLTRIEESRIALAI 72

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FSE Y  S W                      FY+V+PS V+     FG  F +L K   
Sbjct: 73   FSENYTESEWCLRELAKIKDCVDQKRLVAIPIFYKVEPSTVKYLMGEFGDAFRKLAKNDK 132

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT--------------- 145
             K K WK AL    +  G   +   PES++++ I   V K+L A                
Sbjct: 133  RK-KEWKAALRAIPEFMGIPVHEKSPESEILKTIVEAVKKQLKAVKSPLEGSQNASEEPS 191

Query: 146  -----------FQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAV 194
                        + K  G+ G E  ++E+E  L I         I G+ GI K T+   +
Sbjct: 192  VYSDTGTSLGGAKDKTFGIFGNEQRLKELEEKLDIKDTRTLITGIVGMPGIGKTTMLKEL 251

Query: 195  FNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIES-QLNRLARKKVR 253
              K    F    F   +RE      ++ L   L  +L  + N   ++S    +L ++KV 
Sbjct: 252  IEKWKGKFSRHAFVDRIREKSYNSDLECLTISLFEKLLPELNNPQVDSITKGQLRKRKVL 311

Query: 254  IVFDDVT----------------------SGSRVIITTRDKQVLKNCWANKKYRMKELVY 291
            +V DDV+                       GSR+ I T D  +L+    +  Y +++L +
Sbjct: 312  VVLDDVSEREQIYALLGIYDLQNQHEWISDGSRIFIATNDMSLLEG-LVHDTYVVRQLNH 370

Query: 292  ADAHKLFCQWAFGGDH-LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMR 350
             D   LF   AFG +  +    I+L+D+ + YA+G PLALK+LG  LC +  + WE+ ++
Sbjct: 371  KDGMDLFHHHAFGTNQAIPEDRIKLSDEFVHYARGHPLALKILGTELCEKDMKHWETKLK 430

Query: 351  KLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF--------DASK 402
             L   P   I +V+++SY+ L   QK+ FLDIACF   +  D V S+         +A +
Sbjct: 431  ILAQKPKTYIRQVVQVSYNELSSEQKDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIQ 489

Query: 403  SLINLDLF----YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKK 453
             L N  L      R+ MHDL+    R++     +    K+ RLW H+DI +     +L+ 
Sbjct: 490  VLKNKFLIDTCDGRVEMHDLVHTFSRKL----DLKGGSKQRRLWRHEDIVKERTVNLLQN 545

Query: 454  NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLE 505
              G   + G+ LD+++V  EI ++     KM  LR+L+FY            K  +    
Sbjct: 546  RIGAANVRGVFLDLSEVQDEISLDREHLKKMRNLRYLKFYNSHCHQECKTNAKINIPDEL 605

Query: 506  GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP---------- 553
             +P  EVR   W + PLK +  +     LV LK+P +K+E+LWD V+  P          
Sbjct: 606  ELPLKEVRCFHWLKFPLKEVPNDFNPINLVDLKLPFSKIERLWDGVKDTPVLKWVDLNHS 665

Query: 554  -----------------------SSLCTF-----KTPITFEIIDCKMLERLPDELENLEY 585
                                   +SL +      K+  T  +  C   +  P   ENLE 
Sbjct: 666  SLLSSLSGLSKAPNLQGLNLEGCTSLESLGDVDSKSLKTLTLSGCTSFKEFPLIPENLEA 725

Query: 586  LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL---- 641
            L +  T I +LP+++  L  +  L + +   LE IP  +  L+ L  L +S C +L    
Sbjct: 726  LHLDRTAISQLPDNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLKEFP 785

Query: 642  -----------------QTLPELPCNLGLLSARN-----------------------CTS 661
                             +T+P+LP    L  +RN                       C S
Sbjct: 786  AINKSPLKILFLDGTSIKTVPQLPSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKS 845

Query: 662  LEKLPA-----------GLSSMSSV---------LYVNLCNFLKLDPNELSEIVKDGWMK 701
            L  +P            G SS+ +V            N C+F   +  +L +  KD   +
Sbjct: 846  LTSIPELPPNLHYLDAHGCSSLKTVAKPLARILPTVQNHCSFNFTNCCKLEQAAKD---E 902

Query: 702  HSLYEERGIKKSMY------------------FPGNEIPKWFRHQSMGSSATLKTRPPRP 743
             +LY +R  +   Y                  FPG E+P WF H+++GS   L  + P  
Sbjct: 903  ITLYSQRKCQLLSYARKHYNGGLSSEALFSTCFPGCEVPSWFCHEAVGS--LLGRKLPPH 960

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFL--- 800
                KL   + CAVV FPA         G++      ++V C +  K+E   +  F    
Sbjct: 961  WHEKKLSGISLCAVVSFPA---------GQNQISS--FSVTCTFNIKAEDKSWIPFTCPV 1009

Query: 801  -------GKISYVESDHVFLG---CNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG--- 847
                    K   +ESDHVF+    C          N ++ +F    S  F    + G   
Sbjct: 1010 GSWTRDGDKKDKIESDHVFIAYITCPHTIRCLEDENSNKCNF-TEASLEFTVTGDTGVIG 1068

Query: 848  --EVKKCGIHFVYAQD 861
              +V +CG+  VY +D
Sbjct: 1069 KFKVLRCGLSLVYEKD 1084


>gi|227438147|gb|ACP30563.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1799

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 254/897 (28%), Positives = 403/897 (44%), Gaps = 158/897 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL    +   I  F D  + R   I+ +L   I  S I+I++
Sbjct: 14  YRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            ++ YASS W                      FY VDPSHVRKQ+  FG+   +    + 
Sbjct: 74  LTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ +RW  ALT+  +++G        ES++IE+IA DV  +L+AT     + +VG+E  
Sbjct: 134 EEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +++++SLL    +G   + I G  GI K TIA A+ +++S  F+ + F  N+R +  +GG
Sbjct: 194 LDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGG 253

Query: 220 IKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
           + +      LQ+ LLS++     MR  ++ +   RL   KV I+ DDV            
Sbjct: 254 LDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADE 313

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT D+++L+       Y +      +A K+FC++AF        +  L
Sbjct: 314 TNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENL 373

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            ++A +    +P  L+V+G  L G+ ++ WES + +LE     +IE VL++ YDSL +  
Sbjct: 374 AERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKD 433

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           + +F  IA F   E+   V ++               A KSLI +     + MH LL+ +
Sbjct: 434 QILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQV 493

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR+ ++++    P KR  L    DI  VL+ ++G+ ++ GIS DM+ +  ++ +++  F 
Sbjct: 494 GRQAIQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFK 550

Query: 483 KMPKLRFLRFYGDKNKCMVS-HL-EGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
            M  LRFLR Y  +    V  HL E + F   ++ L W   P K L    C E LV L +
Sbjct: 551 SMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHL 610

Query: 538 PCTKVEQLWDDVQRLP--------SSLCTFKTP-----ITFEIID--------------- 569
             T++EQLW+  Q L         S LC  + P        EI+D               
Sbjct: 611 TDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVG 670

Query: 570 ------------CKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNN 614
                       CK L+ +P    L +LE L + G+  +RELP+    +S   R +    
Sbjct: 671 NLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPD----ISTTIRELSIPE 726

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA------G 668
           + LE   ES R  S L  L I  C         P    L+  R+ T +E++P       G
Sbjct: 727 TMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHG 786

Query: 669 LSSMS-----------------SVLYVNLCNFLK-LDPNELSEIVKD---------GWMK 701
           L  +S                 + L V  C  L+ L+P      ++D         G   
Sbjct: 787 LKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGARIEDLSFLDCFRLGRKA 846

Query: 702 HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
             L  ++  +  +  PG  +P  F H+++G+   + +   R         F  CAV+
Sbjct: 847 RRLITQQSSR--VCLPGRNVPAEFHHRAIGNFVAICSNAYR---------FKICAVI 892



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 218/780 (27%), Positives = 356/780 (45%), Gaps = 124/780 (15%)

Query: 127  ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGI 185
            ES++IE+IA DV  +L++T  +  + +VG+E  +E+++SLL +  EG    + I G  GI
Sbjct: 1080 ESEMIEKIARDVSNKLNSTVSTDFEDMVGIEAHLEKMQSLLHLDDEGGAMFVGICGPAGI 1139

Query: 186  SKITIAGAVFNKISRHFEGSYFALNVREA------EETGGIKDLQKKLLSELSKDGNMR- 238
             K TIA A+ +++S  F+ S F  N+R +      +E G    LQ+ LLS++     MR 
Sbjct: 1140 GKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRI 1199

Query: 239  -NIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
             ++ +   RL  +KV I+ DDV    ++     + +     W     R+  ++  DA ++
Sbjct: 1200 YHLGAIPERLCDQKVLIILDDVDDLKQLEALADETK-----WFGDGSRVILMLELDARQI 1254

Query: 298  FCQWAFGGDHLDASH--IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
            FC+ AF    L A H   +L ++ +     +PL L+V+G  L  +  + WE+ +++LE  
Sbjct: 1255 FCRIAF--RQLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENS 1312

Query: 356  PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------K 402
             + +IE VL++ YD+L    + +F  IACF   +  D V ++   S             K
Sbjct: 1313 LNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYK 1372

Query: 403  SLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEG 462
            SLI +     I MH LL+ +GRE V    +  P KR  L     I  VL+ +  + ++ G
Sbjct: 1373 SLIQISAEGTIVMHKLLQQVGREAVH---LQEPRKRQILIDAHQICDVLENDYDSASVMG 1429

Query: 463  ISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVS-HL-EGVPFAE-VRHLEWPQ 519
            IS D + +   + +++ AF  M  LRFL  Y  +    V  HL E + F   +R L W  
Sbjct: 1430 ISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEV 1489

Query: 520  CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
             P K L   +  E LV L    +K+EQLW  +Q           P+T             
Sbjct: 1490 YPGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQ-----------PLT------------- 1525

Query: 578  DELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
                NL+ + + G+ +++E+P+ L   + +KRL L+   +L  IP SI  L KL  L I+
Sbjct: 1526 ----NLKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEIN 1580

Query: 637  HCERLQTLPELPCNLGLLSARNCTSLEKLP-AGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
             C  LQ  P         S  N  SLE L   G   +  + YV+  + +  D      ++
Sbjct: 1581 LCISLQVFP---------SHLNLASLETLEMVGCWQLRKIPYVSTKSLVIGD-----TML 1626

Query: 696  KDGWMKHSLYEERGIKKS---MYFPGNEIPKWF-RHQSMGSSATLKTRPPRPAGYNKLIS 751
            ++      L  +R I +     YFPG E+P  F  H+S GSS T+     RPA    +  
Sbjct: 1627 EEFPESLCLEAKRVITQQSFRAYFPGKEMPAEFDDHRSFGSSLTI-----RPA----VCK 1677

Query: 752  FAFCAVVVFPAFLK--YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESD 809
            F  C V+     ++  YFR               C   K         W    +  +  +
Sbjct: 1678 FRICLVLSPKPDMEEAYFR------------LLFCIRVKGCPSDEDMLWL--DLPKIRGE 1723

Query: 810  HVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADHILKD 869
            H+F+    F  E F  +++E  F+   S H        +V +CG+  +  +  ++ + +D
Sbjct: 1724 HLFI----FQAE-FVEHHEEMVFKFSTSSH------EVDVAECGVQVLTDESCSEQVSED 1772


>gi|227438253|gb|ACP30616.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1791

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 254/897 (28%), Positives = 403/897 (44%), Gaps = 158/897 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL    +   I  F D  + R   I+ +L   I  S I+I++
Sbjct: 14  YRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            ++ YASS W                      FY VDPSHVRKQ+  FG+   +    + 
Sbjct: 74  LTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ +RW  ALT+  +++G        ES++IE+IA DV  +L+AT     + +VG+E  
Sbjct: 134 EEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +++++SLL    +G   + I G  GI K TIA A+ +++S  F+ + F  N+R +  +GG
Sbjct: 194 LDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGG 253

Query: 220 IKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
           + +      LQ+ LLS++     MR  ++ +   RL   KV I+ DDV            
Sbjct: 254 LDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADE 313

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT D+++L+       Y +      +A K+FC++AF        +  L
Sbjct: 314 TNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENL 373

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            ++A +    +P  L+V+G  L G+ ++ WES + +LE     +IE VL++ YDSL +  
Sbjct: 374 AERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEKD 433

Query: 376 KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
           + +F  IA F   E+   V ++               A KSLI +     + MH LL+ +
Sbjct: 434 QILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQV 493

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR+ ++++    P KR  L    DI  VL+ ++G+ ++ GIS DM+ +  ++ +++  F 
Sbjct: 494 GRQAIQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFK 550

Query: 483 KMPKLRFLRFYGDKNKCMVS-HL-EGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
            M  LRFLR Y  +    V  HL E + F   ++ L W   P K L    C E LV L +
Sbjct: 551 SMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELHL 610

Query: 538 PCTKVEQLWDDVQRLP--------SSLCTFKTP-----ITFEIID--------------- 569
             T++EQLW+  Q L         S LC  + P        EI+D               
Sbjct: 611 TDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVG 670

Query: 570 ------------CKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNN 614
                       CK L+ +P    L +LE L + G+  +RELP+    +S   R +    
Sbjct: 671 NLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPD----ISTTIRELSIPE 726

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA------G 668
           + LE   ES R  S L  L I  C         P    L+  R+ T +E++P       G
Sbjct: 727 TMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHG 786

Query: 669 LSSMS-----------------SVLYVNLCNFLK-LDPNELSEIVKD---------GWMK 701
           L  +S                 + L V  C  L+ L+P      ++D         G   
Sbjct: 787 LKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGARIEDLSFLDCFRLGRKA 846

Query: 702 HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
             L  ++  +  +  PG  +P  F H+++G+   + +   R         F  CAV+
Sbjct: 847 RRLITQQSSR--VCLPGRNVPAEFHHRAIGNFVAICSNAYR---------FKICAVI 892



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 218/780 (27%), Positives = 356/780 (45%), Gaps = 124/780 (15%)

Query: 127  ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGI 185
            ES++IE+IA DV  +L++T  +  + +VG+E  +E+++SLL +  EG    + I G  GI
Sbjct: 1024 ESEMIEKIARDVSNKLNSTVSTDFEDMVGIEAHLEKMQSLLHLDDEGGAMFVGICGPAGI 1083

Query: 186  SKITIAGAVFNKISRHFEGSYFALNVREA------EETGGIKDLQKKLLSELSKDGNMR- 238
             K TIA A+ +++S  F+ S F  N+R +      +E G    LQ+ LLS++     MR 
Sbjct: 1084 GKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRI 1143

Query: 239  -NIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
             ++ +   RL  +KV I+ DDV    ++     + +     W     R+  ++  DA ++
Sbjct: 1144 YHLGAIPERLCDQKVLIILDDVDDLKQLEALADETK-----WFGDGSRVILMLELDARQI 1198

Query: 298  FCQWAFGGDHLDASH--IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
            FC+ AF    L A H   +L ++ +     +PL L+V+G  L  +  + WE+ +++LE  
Sbjct: 1199 FCRIAF--RQLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENS 1256

Query: 356  PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------K 402
             + +IE VL++ YD+L    + +F  IACF   +  D V ++   S             K
Sbjct: 1257 LNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYK 1316

Query: 403  SLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEG 462
            SLI +     I MH LL+ +GRE V    +  P KR  L     I  VL+ +  + ++ G
Sbjct: 1317 SLIQISAEGTIVMHKLLQQVGREAVH---LQEPRKRQILIDAHQICDVLENDYDSASVMG 1373

Query: 463  ISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVS-HL-EGVPFAE-VRHLEWPQ 519
            IS D + +   + +++ AF  M  LRFL  Y  +    V  HL E + F   +R L W  
Sbjct: 1374 ISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEV 1433

Query: 520  CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
             P K L   +  E LV L    +K+EQLW  +Q           P+T             
Sbjct: 1434 YPGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQ-----------PLT------------- 1469

Query: 578  DELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
                NL+ + + G+ +++E+P+ L   + +KRL L+   +L  IP SI  L KL  L I+
Sbjct: 1470 ----NLKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEIN 1524

Query: 637  HCERLQTLPELPCNLGLLSARNCTSLEKLP-AGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
             C  LQ  P         S  N  SLE L   G   +  + YV+  + +  D      ++
Sbjct: 1525 LCISLQVFP---------SHLNLASLETLEMVGCWQLRKIPYVSTKSLVIGDT-----ML 1570

Query: 696  KDGWMKHSLYEERGIKKS---MYFPGNEIPKWF-RHQSMGSSATLKTRPPRPAGYNKLIS 751
            ++      L  +R I +     YFPG E+P  F  H+S GSS T+     RPA    +  
Sbjct: 1571 EEFPESLCLEAKRVITQQSFRAYFPGKEMPAEFDDHRSFGSSLTI-----RPA----VCK 1621

Query: 752  FAFCAVVVFPAFLK--YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESD 809
            F  C V+     ++  YFR               C   K         W    +  +  +
Sbjct: 1622 FRICLVLSPKPDMEEAYFR------------LLFCIRVKGCPSDEDMLWL--DLPKIRGE 1667

Query: 810  HVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADHILKD 869
            H+F+    F  E F  +++E  F+   S H        +V +CG+  +  +  ++ + +D
Sbjct: 1668 HLFI----FQAE-FVEHHEEMVFKFSTSSH------EVDVAECGVQVLTDESCSEQVSED 1716


>gi|215261579|gb|ACJ64859.1| disease resistance protein RPP1-like protein R5 [Arabidopsis
           thaliana]
          Length = 1202

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 234/779 (30%), Positives = 374/779 (48%), Gaps = 108/779 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF GED R    SH+      K I TF D+ + R  +I   L   I  S IAI++
Sbjct: 151 HHVFPSFHGEDVRKTILSHILESFRRKGIDTFSDNNIERSKSIGLELKEAIRGSKIAIVL 210

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F +    + 
Sbjct: 211 LSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGDFGKAFKKTCNGKT 270

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G  S   R E+ +IE+IA +V   L++   S++  GLVG+  
Sbjct: 271 KEHVERWRKALEDVATIAGEHSRNWRNEAAMIEKIATNVSNMLNSCTPSRDFDGLVGMRA 330

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR------ 212
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N+R      
Sbjct: 331 HMDRMEHLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRL 390

Query: 213 EAEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
             +E     ++Q+K+LS +   KD  + N+     RL  KKV +V D+V           
Sbjct: 391 RLDEYSAQMEVQQKMLSTIFSQKDIIVPNLGVAQERLKDKKVFLVLDEVDHIRQLDALAK 450

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D +VL     N  Y++K     +A ++FC  AFG         +
Sbjct: 451 ETRWFGPGSRIIITTEDVRVLNAHRINHVYKVKFPSSDEAFQIFCMNAFGQKQPHEGFCK 510

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  + +  A  +PL LKVLG  L G SK  WE  + K++     EI+ ++K S+D+L D 
Sbjct: 511 LAWEVMALAGNLPLGLKVLGSALRGMSKPEWERTLPKIKYCLDGEIKSIIKFSFDALCDE 570

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
            K++FL IACF  G    +V  +                 KSLI+++    I  H +L+ 
Sbjct: 571 DKDLFLYIACFFNGIKLHKVEGVLAKKFLDVRQSLHVLVEKSLISINQSGLIETHTVLKQ 630

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
            GRE  RK+ ++   K   L   +DI +VL  +T       I+   +    E+ ++  A 
Sbjct: 631 FGRETSRKQFVHGFAKPQFLVDARDICEVLNDDT-------IAFYRDYTEEELSISEKAL 683

Query: 482 SKMPKLRFLRF----YGDKNKCMVSHLEGVPFAEVRHLEWPQ----CPLKTLNICAEKLV 533
            +M   +F+R     + ++   ++ H +     ++R L W      C   T N   E LV
Sbjct: 684 ERMHDFQFVRINAFAHPERLHSLLHHSQ-----KIRLLHWSYLKDICLPCTFN--PEFLV 736

Query: 534 SLKMPCTKVEQLWDDVQRLP-------------SSLCTFKTPITFEII---DCKMLERLP 577
            L M  +K+ +LW+  ++L              + L    T    E +   +C  L R+P
Sbjct: 737 ELGMYASKLHKLWEGTKQLQNLRWMDLCYSRDLTKLPDLSTATNLEDLILRNCSSLVRIP 796

Query: 578 DELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL 633
             +EN   L +      + + ELP S+G  + ++ L L+N S+L ++P SI + + L  L
Sbjct: 797 CSIENATNLQILDLSDCSNLVELP-SIGNATRLEELNLNNCSSLVKLPSSI-NATNLQKL 854

Query: 634 FISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDP 688
           F+ +C R+  LP  E   NL +L   NC+SL +LP  ++S +++  L ++ C+ LK  P
Sbjct: 855 FLRNCSRVVELPAIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSQLKCFP 913



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 40/230 (17%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL---GRLSW--- 605
            LP S+ +       +I  C  L+  P+   N+E + +  T I+E+P S+    RLS+   
Sbjct: 888  LPPSIASATNLKKLDISGCSQLKCFPEISTNIEIVNLIETAIKEVPLSIMSWSRLSYFGM 947

Query: 606  ---------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                           +  L+L    +++ IP  ++ +S+L  L +  C+ L +LP+L  N
Sbjct: 948  SYFESLNEFPHALDIITDLVLIR-EDIQEIPPWVKGMSRLGVLRLYDCKNLVSLPQLSDN 1006

Query: 651  LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGI 710
            L  + A NC SLE+L    ++    L    C  L  +  +L        + H+  +   I
Sbjct: 1007 LEYIVADNCQSLERLDCCFNNREIHLIFPNCFNLNQEARDL--------IMHTSTDGYAI 1058

Query: 711  KKSMYFPGNEIPKWFRHQSMGSSATLK-TRPPRPAGYNKLISFAFCAVVV 759
                 F G ++P  F H++   S  +K    P P      + F  C ++V
Sbjct: 1059 -----FSGTQVPACFNHRATSDSLKIKLNESPLPTS----LRFKACIMLV 1099


>gi|357500609|ref|XP_003620593.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355495608|gb|AES76811.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 1196

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 278/1029 (27%), Positives = 449/1029 (43%), Gaps = 222/1029 (21%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
            YDVF++FRG+DTR+NFT +L   L    I  F DD  L +G++I   LL  IE S + + 
Sbjct: 20   YDVFITFRGDDTRNNFTGYLLDALKTNGIYAFRDDTNLQKGESIGPELLRAIEGSQVFVA 79

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            +FS  YASS W                      FY VDPS VRKQS  +G  F+   + F
Sbjct: 80   VFSRNYASSTWCLQELEKICECVHVSRKHILPVFYDVDPSEVRKQSGIYGEAFTIHEQTF 139

Query: 100  PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             +    + RW+ AL +   ++G+D    +P+S  I  I   ++  L+      +K LV +
Sbjct: 140  QQDSQMVSRWREALKQVGSIAGWDL-CDKPQSAEIRMIVQTIMNILECKSSWVSKDLVAI 198

Query: 157  ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV-REA 214
               IE ++S L + S +GV  + I G+GGI K T++ A++++IS  F GS F  +V ++ 
Sbjct: 199  NSPIEALQSHLHLDSVDGVRAIGICGMGGIGKTTLSMALYDQISHRFSGSCFIEDVAKKF 258

Query: 215  EETGGIKDLQKKLLSELS--KDGNMRNIESQLN----RLARKKVRIVFDDVTS------- 261
                G  D QK++L +    +D ++ N     N    RL R++  ++ D+V         
Sbjct: 259  RLHDGPLDAQKEILLQTVGIEDHHICNRHRATNLIQSRLRRERALLILDNVDRVEQLEKI 318

Query: 262  ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     GSR+II +RD+ +L+    +  Y++  L + +AH LFC+ AF  + +   +
Sbjct: 319  GVHRECLGVGSRIIIISRDEHILEEYGVDVVYKVPLLDWNEAHMLFCRKAFKEEKIIMRN 378

Query: 313  IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             E L  + + YA G+PLA+KVLG +L GR+   W+SA+ +L   P  ++ +VL++S+D L
Sbjct: 379  YESLVYEILDYANGLPLAIKVLGSFLFGRNVTEWKSALTRLRESPDNDVMDVLQLSFDGL 438

Query: 372  DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
             +++K +FLDIACF   +      +I +               KSL+N++    + MH L
Sbjct: 439  KETEKEIFLDIACFFNRKSEKYAKNILNCCRFHADIGLRVLIDKSLMNIN-GQNLEMHSL 497

Query: 419  LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT-----------------GTEAIE 461
            L ++GR+IV+  S   P K +RLW  + +Y V+ +N                    + ++
Sbjct: 498  LEELGRKIVQNSSSKEPRKWSRLWSTEQLYNVMLENMVKLLFSNKKTYFQFYKQHEKHVK 557

Query: 462  GISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---EVRHLEWP 518
             + L+    + E+ +N    SKM  LR L      N      + G   +   ++R+++W 
Sbjct: 558  ALVLN----DEEVGLNVEHLSKMSNLRLLIIMWGVN------ISGSLLSLSNKLRYVQWT 607

Query: 519  QCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS---------------------- 554
              P K L  N    +LV L +  + ++QLW   + LP+                      
Sbjct: 608  GYPFKYLPSNFHPNELVELILHSSNIKQLWRKKKYLPNLRGLDLRYSKKLVKIVDFGEFP 667

Query: 555  ------------------SLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTV----K 589
                              S+   +  +   + DCK L  +P+    L +L+YL +    K
Sbjct: 668  NLEWLNLEGCISLLELDPSIGLLRNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHK 727

Query: 590  GTT------------------------------IRELPESLGRLS----------WVKRL 609
              T                              +RE+  S  RLS          W++ L
Sbjct: 728  AFTNQRDLKNPDISESASHSRSYVLSSLHSLYCLREVNISFCRLSQVSYAIECLYWLEIL 787

Query: 610  ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP--CNLGLLSARNCTSLEKLPA 667
             L  N N   +P S+R LSKL +L + HC+ L++LP+LP   N+G     N      L  
Sbjct: 788  NLGGN-NFVTLP-SLRKLSKLVYLNLEHCKLLESLPQLPFPTNIGEDHRENNNKFHDLFT 845

Query: 668  GLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF-------PGNE 720
                   V  + + N  KL   E    +   WM   +   +    +  F       PG+E
Sbjct: 846  -----RKVTQLVIFNCPKLGERERCSSMAFSWMIQFIQAYQHFYPASLFEGIHIVTPGSE 900

Query: 721  IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNV 780
            IP W  +QS+GSS  +   P      N +I F  CAV       +          W  ++
Sbjct: 901  IPSWINNQSVGSSIPIDRSPIMHDNNNNIIGFVCCAVFSVAPNQEIL-------PWIADI 953

Query: 781  ---------YAVCCDWKR----KSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNY 827
                     ++V    KR        HL+  +L + SY + + +   C   GGE  G   
Sbjct: 954  KLVIDSLSSFSVPVILKRYLITTKSSHLWIIYLSRESYDKFEKI--SCYIVGGEDLGMEV 1011

Query: 828  DEFSFRIHC 836
            +   +R  C
Sbjct: 1012 NSCGYRWVC 1020


>gi|357461481|ref|XP_003601022.1| TMV resistance protein N [Medicago truncatula]
 gi|355490070|gb|AES71273.1| TMV resistance protein N [Medicago truncatula]
          Length = 868

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 221/736 (30%), Positives = 352/736 (47%), Gaps = 117/736 (15%)

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           + + RW+N L +AA+LSG+D+N  R E+ L+++I  +VL +LD+T  S  +  VG+E  +
Sbjct: 2   DALSRWRNVLNQAANLSGWDANNFRSEADLVKKIVKEVLTKLDSTHLSITEFPVGLESRV 61

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--AEETG 218
           EE+   +   S  VC + IWG+GG  K T A A++N+I+R F    F  N+RE   ++  
Sbjct: 62  EELIEFIDDQSNKVCMIGIWGMGGSGKTTTAKAIYNQINRKFADRSFIENIREICEKDNT 121

Query: 219 GIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT------------ 260
           GI  LQ++LLS++   K   + +I S       RL  K V ++ DDV+            
Sbjct: 122 GIIRLQEQLLSDVLKIKVKKIHSITSGTTMIEKRLRGKTVLVILDDVSKFEQIKALCGNR 181

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
               +GS +I+TTRD  +LK         MKE+   ++ +LF   AF          EL+
Sbjct: 182 KWFGTGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDESLELFSWHAFREPSPTKYFTELS 241

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQ 375
              + Y  G+PLAL++LG YL GR+K  W S + KLE IP+ +++E L+ISYD L DD +
Sbjct: 242 RNVVAYCGGLPLALEILGSYLYGRTKREWTSVLSKLERIPNDQVQEKLRISYDGLKDDME 301

Query: 376 KNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDM 422
           K++FLDI  F  G+ R  V  I +               +SL+ ++   ++ MHDLLRDM
Sbjct: 302 KDIFLDICFFFIGKDRAYVTKILNGRGLYADIGITVLVERSLVKIEKNNKLGMHDLLRDM 361

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREIVR+ S+ +PGKR+RLW H+D++ VL KN  T+ +EG++  + + +R +  ++ +F 
Sbjct: 362 GREIVRQSSVKNPGKRSRLWFHEDVHDVLTKNMVTKTVEGLAFKLQRTDR-VCFSTNSFK 420

Query: 483 KMPKLRFLR-----FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKM 537
           +M KLR L+       GD + C  + L  V +        P       +     LV++ +
Sbjct: 421 EMKKLRLLQLDCVNLIGDYD-CFSNQLRWVKWQGFTFNNIPD------DFYQGNLVAMDL 473

Query: 538 PCTKVEQLW--------------------------------------DDVQRLPSSLCTF 559
             + + Q+W                                        +  LP  +   
Sbjct: 474 KHSNIRQVWIETTPRLFKIMKDCPNLSDIHQSIGNLNSLLLINLKDCTSLNSLPKKIYQL 533

Query: 560 KTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIRELP--------ESLGRLSWVKRL 609
           K+  T  +  C  +E L +  ++E+L  L  K T ++E+P         SL R+S    +
Sbjct: 534 KSLKTLILSGCSKIENLEEIVQMESLTTLIAKDTGVKEVPCSIMSPTMNSLPRVSTFGNM 593

Query: 610 ILS----NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
             S    N  N+  +   I+ LS+L  +++    ++Q   EL   LG     N T LE  
Sbjct: 594 AFSLTSINVHNVGFLSPVIKSLSQLRTVWVQCRSKIQLTQELRRILGGQYDANFTKLETS 653

Query: 666 PAGLSSMSSV--LYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK--SMYFPGNEI 721
            A   S  S+  L + + +           IV D   K S+ +E        ++ PG   
Sbjct: 654 HASQFSNHSLRSLLIRMGS---------CHIVIDTLGK-SISQEPTTNNYSDLFLPGGNY 703

Query: 722 PKWFRHQSMGSSATLK 737
           P W  +   G SA  +
Sbjct: 704 PSWLAYTGEGPSAQFQ 719


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
           thaliana]
          Length = 1162

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 238/794 (29%), Positives = 376/794 (47%), Gaps = 111/794 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 94  HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKKAIKGSKIAIVL 153

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S +YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 154 LSRKYASSSWCLDELTEIMKCREVLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKT 213

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G+ S+  R E+ +IE+IA  V   L++   S++  GLVG+  
Sbjct: 214 KEYVERWRKALEDVATIAGYHSHSWRNEADMIEKIATYVSNMLNSFTPSRDFDGLVGMRA 273

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL    + V  + IWG  GI K TIA  + N++S  F+ S   +N++      
Sbjct: 274 HMDMLEQLLRHDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRL 333

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 334 CLDERSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 393

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         E
Sbjct: 394 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDE 453

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL LKVLG  L G+SK  WE  + +L+      I  +++ SYD+L D 
Sbjct: 454 IAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDALCDE 513

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFYRIRMHDLLRDM 422
            K +FL IAC    E   +V  +              A KSLI+ D   RI MH LL   
Sbjct: 514 DKYLFLYIACLFNDESTTKVKELLGKFLDARQGLHILAQKSLISFD-GERIHMHTLLEQF 572

Query: 423 GREIVRKESINHPGKRNRLW-HHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHMNSYA 480
           GRE  RK+ + H   +++L    +DI +VL  + T +    GI+LD+ K   E++++  A
Sbjct: 573 GRETSRKQFVYHGYTKHQLLVGERDICEVLNDDTTDSRRFIGINLDLYKNEEELNISEKA 632

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---------EVRHLEWPQCPLKTLNIC--- 528
             ++   +F++     N       E V  A          +R L+W        NIC   
Sbjct: 633 LERIHDFQFVKI----NDVFTHQPERVQLALEDLIYQSPRIRSLKW----FPYQNICLPS 684

Query: 529 ---AEKLVSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFE---IID 569
               E LV L M  + + +LW+  ++L +              L    T    E   + +
Sbjct: 685 TFNPEFLVELDMSDSNLRKLWEGTKQLRNLKWMDLSDSSYLKELPNLSTATNLEELKLRN 744

Query: 570 CKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIR 625
           C  L  LP  +E L  L +      +++ ELP S G  + +K+L L   S+L ++P SI 
Sbjct: 745 CSSLVELPSSIEKLTSLQILDLHSCSSLVELP-SFGNTTKLKKLDLGKCSSLVKLPPSI- 802

Query: 626 HLSKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--C 681
           + + L  L + +C R+  LP  E    L  L  RNC+SL +LP  + + +++  +N+  C
Sbjct: 803 NANNLQELSLRNCSRVVKLPAIENATKLRELKLRNCSSLIELPLSIGTATNLKKLNISGC 862

Query: 682 NFLKLDPNELSEIV 695
           + L   P+ + ++ 
Sbjct: 863 SSLVKLPSSIGDMT 876



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 29/139 (20%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL  L M  C+K+E L       P+++   K+  T ++ DC  L+  P+   ++  L +
Sbjct: 900  QKLSELLMSECSKLEAL-------PTNI-NLKSLYTLDLTDCTQLKSFPEISTHISELRL 951

Query: 589  KGTTIRELPESLG--------RLSWVKRL------------ILSNNSNLERIPESIRHLS 628
            KGT I+E+P S+          +S+ + L            +L  + +++ +P  ++ +S
Sbjct: 952  KGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMS 1011

Query: 629  KLTFLFISHCERLQTLPEL 647
            +L  L +++C  L +LP+L
Sbjct: 1012 RLRDLRLNNCNNLVSLPQL 1030



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 25/149 (16%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
           +LPSS+        F++ +C  L  LP  + NL+ L+                     L+
Sbjct: 867 KLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNLQKLS--------------------ELL 906

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
           +S  S LE +P +I +L  L  L ++ C +L++ PE+  ++  L  +  T+++++P  ++
Sbjct: 907 MSECSKLEALPTNI-NLKSLYTLDLTDCTQLKSFPEISTHISELRLKG-TAIKEVPLSIT 964

Query: 671 SMSSVLYVNLCNF--LKLDPNELSEIVKD 697
           S S +    +  F  LK  P+ L +I+ D
Sbjct: 965 SWSRLAVYEMSYFESLKEFPHAL-DIITD 992


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 250/853 (29%), Positives = 398/853 (46%), Gaps = 150/853 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 81  HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKKAIKGSKIAIVL 140

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY V+P+ ++KQ+  FG+ F++  R + 
Sbjct: 141 LSRKYASSSWCLDELAEIMKCREVLGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGKT 200

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G+ S+  R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 201 KEHIERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSCTPSRDFDGLVGMRA 260

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            +  +E LL +  + V  + IWG  GI K TIA  + N++S  F+ S   +N++      
Sbjct: 261 HMNMMEHLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRP 320

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 321 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 380

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         E
Sbjct: 381 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDE 440

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL L VLG  L G+SK  WE  + +L+      I  +++ SYD+L D 
Sbjct: 441 IAREVMALAGELPLGLTVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDALCDE 500

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLD--LFY--RIRMHDL 418
            K +FL IAC    E   +V  +              A KSLI+L    FY  RI MH L
Sbjct: 501 DKYLFLYIACLFNDESTTKVKELLGKFLDVKQGLHVLAQKSLISLSYLTFYGERIHMHTL 560

Query: 419 LRDMGREIVRKESINHP-GKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHM 476
           L   GRE  RK+ ++H   KR  L   + I +VL  + T +    GI+L+++    E+++
Sbjct: 561 LEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGINLELSNTEEELNI 620

Query: 477 NSYAFSKM---------------------------------PKLRFLRFYGDKNKCMVSH 503
           +     ++                                 PK+R L+++  +N C+ S 
Sbjct: 621 SEKVLERVHDFHFVRIDASFQPERLQPERLQLALQDLIYHSPKIRSLKWHRYQNICLPST 680

Query: 504 L-------------------EGVPFAEVRHLEWPQCP----LKTL-NI-CAEKLVSLKMP 538
                               EG    ++R+L+W        LK L N+  A  L  LK+ 
Sbjct: 681 FNPEFLIELDMRYSKLQKLWEGT--KQLRNLKWMSLSYSIDLKELPNLSTATNLEELKLS 738

Query: 539 -CTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLPDEL- 580
            C+ + +L   +++L S              L +F      EI+D   C  L +LP  + 
Sbjct: 739 NCSSLVELPSSIEKLTSLQILDLQSCSSLVELPSFGNATKLEILDLDYCSSLVKLPPSIN 798

Query: 581 -ENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
             NL+ L+++  + + ELP S+G  + +K+L +   S+L ++P SI  ++ L  L +S+C
Sbjct: 799 ANNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDLEVLDLSNC 858

Query: 639 ERLQTLPELPCNLG---LLSARNCTSLEKLPAGLSSMS-SVLYVNLCNFLKLDPNELSEI 694
             L  LP    NL    +L+   C+ LE LP  ++  + S LY+  C+ LK  P E+S  
Sbjct: 859 SNLVELPSSIGNLQKLIVLTMHGCSKLETLPININLKALSTLYLTDCSRLKRFP-EISTN 917

Query: 695 VKDGWMKHSLYEE 707
           +K  W+  +  +E
Sbjct: 918 IKYLWLTGTAIKE 930



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 43/250 (17%)

Query: 530  EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL+ L M  C+K+E L  ++          K   T  + DC  L+R P+   N++YL +
Sbjct: 872  QKLIVLTMHGCSKLETLPININ--------LKALSTLYLTDCSRLKRFPEISTNIKYLWL 923

Query: 589  KGTTIRELPESLG--------RLSWVKRLI-----------LSNNSNLERIPESIRHLSK 629
             GT I+E+P S+         R+S+ + L            L  + +++ +P  ++ +S+
Sbjct: 924  TGTAIKEVPLSIMSWSRLAEFRISYFESLKEFPHAFDIITKLQLSKDIQEVPPWVKRMSR 983

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
            L  L +++C  L +LP+L  +L  + A NC SLEKL    ++    + +N  N  KL+  
Sbjct: 984  LRVLSLNNCNNLVSLPQLSDSLDYIHADNCKSLEKLDCCFNNPD--IRLNFPNCFKLNQE 1041

Query: 690  ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                I+       ++            PG ++P  F H++  S   LK +  + + +   
Sbjct: 1042 ARDLIMHTSPCIDAM-----------LPGTQVPACFNHRAT-SGDYLKIK-LKESPFPTT 1088

Query: 750  ISFAFCAVVV 759
            + F  C ++V
Sbjct: 1089 LRFKACIMLV 1098


>gi|357474623|ref|XP_003607596.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508651|gb|AES89793.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1039

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 272/1021 (26%), Positives = 448/1021 (43%), Gaps = 190/1021 (18%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
            YDVF++FRGEDTR NF  HL   L  K I  F DD  L +G++I   L+  IE S + I 
Sbjct: 22   YDVFVTFRGEDTRFNFIDHLFAALQRKGIFAFRDDANLQKGESIPPELIRAIEGSQVFIA 81

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
            + S+ Y+SS W                      FY VDPS VR Q   +G  FS+  + F
Sbjct: 82   VLSKNYSSSTWCLRELVHILDCSQVSGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTF 141

Query: 100  PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
                  ++ W+ ALT+  ++SG+D    +P+   I++I  ++L  L   F S  K LVG+
Sbjct: 142  QHDSHVVQSWREALTQVGNISGWDLRD-KPQYAEIKKIVEEILNILGHNFSSLPKELVGM 200

Query: 157  ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
               IE++ +LL + S + V  + I G+GGI K T+A A++ +IS  F+   F  ++ +  
Sbjct: 201  NPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSKIY 260

Query: 216  ETGGIKDLQKKLLSE-LSKD---------------------------GNMRNIESQLNRL 247
               G    QK++L + L K+                            N+  +E QL++L
Sbjct: 261  RHDGQVGAQKQILHQTLGKEHFQICNLFDTDDSIRRRLRRLRALIILDNVDKVE-QLDKL 319

Query: 248  ARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
            A  +     + +  GSR+II +RD+ +L     ++ Y++  L   ++ +LFCQ AF  DH
Sbjct: 320  ALNR-----ECLGVGSRIIIISRDEHILNEYGVDEVYKVPLLNETNSLQLFCQKAFKLDH 374

Query: 308  LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
            + + + +L    + YA G+PLA+KVLG +L GR    W SA+ +L+  P+ +I +VL++S
Sbjct: 375  IMSGYDKLALDTLSYANGLPLAIKVLGSFLFGRDISEWRSALARLKESPNKDIMDVLRLS 434

Query: 368  YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYR-- 412
            +D L++ +K +FLDIACF E   ++ + +I +               KSLI+   FY   
Sbjct: 435  FDGLENLEKEIFLDIACFFERYDKECLTNILNCCGFHPDIGLRILIDKSLIS---FYHGG 491

Query: 413  IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL------- 465
              MH LL ++GR+IV++ S     K +RLW  +    V+ +N   + ++ I L       
Sbjct: 492  CVMHSLLVELGRKIVQENSTKDLKKWSRLWFPEHFDNVMLENM-EKNVQAIVLAYHSPRQ 550

Query: 466  ----------DMNKVN--------------------REIHMNSYAFSKMPK--------- 486
                      +MN +                     R +  N Y F+ +PK         
Sbjct: 551  IKKFAAETLSNMNHIRLLILENTYFSGSLNYLSNELRYVEWNRYPFTYLPKSFQPNQLVE 610

Query: 487  --------------------LRFLRFYGDKNKCMVSHLEGVPFAEVRHL----EWPQCPL 522
                                LR +     +N   +     VP  E+ +L         P 
Sbjct: 611  LHLSYSSIKQLWKGKKYLPNLRIMDLMHSRNLIKLPDFGEVPNLEMLNLAGCVNLISIPN 670

Query: 523  KTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSS--------------LCTFKTPITFEII 568
                + + K ++L   C+KV      +++L SS              L T      ++  
Sbjct: 671  SIFVLTSLKYLNLS-GCSKVFNYPKHLKKLDSSETVLHSQSKTSSLILTTIGLHSLYQNA 729

Query: 569  DCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIR 625
               ++ RL   L +   L  L +    + ++P+++G + W+ RL+LS N N   +P S+R
Sbjct: 730  HKGLVSRLLSSLPSFFFLRELDISFCGLSQIPDAIGCIRWLGRLVLSGN-NFVTLP-SLR 787

Query: 626  HLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLK 685
             LSKL +L + +C++L  LPELP        +NC        GL   +        +  +
Sbjct: 788  ELSKLVYLDLQYCKQLNFLPELPLPHSSTVGQNCV------VGLYIFNCPELGERGHCSR 841

Query: 686  LDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
            +  + L + +       + + E  I   +  PG+EIP+W  +QS+G+S ++       + 
Sbjct: 842  MTLSWLIQFLHANQESFACFLETDI--GIVIPGSEIPRWLNNQSLGNSMSINLS----SI 895

Query: 746  YNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISY 805
             +        A VVF   L Y    + E +   N   +  D      G+ +++    I Y
Sbjct: 896  VHDKDFIGLVACVVFSVKLDYPNITTNELE---NNICISLDEDHTRTGYGFNFSCPVICY 952

Query: 806  V-----ESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQ 860
                  ESDH +L    +        +  F      +F        GEVKKCG   ++ Q
Sbjct: 953  ADLFTPESDHTWLLYLPWDRLNPDKTFRGFDHITMTTFIDEREGLHGEVKKCGYRCIFKQ 1012

Query: 861  D 861
            D
Sbjct: 1013 D 1013


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 239/750 (31%), Positives = 383/750 (51%), Gaps = 93/750 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF+SFRG DTR +FTSHL   L  K I  F D +L  G+ IS  L   IE S ++I++
Sbjct: 57  FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISL-LFDRIEQSKMSIVV 115

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FSE YA+S W                      FY+V  S V  Q+ SF   F    K F 
Sbjct: 116 FSEDYANSWWCLEEVGKIMQRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFN 175

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK-NKGLVGV 156
              +K++  K AL  A+++ GF       E   ++EI  +  + L+          L G+
Sbjct: 176 GDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI 235

Query: 157 ECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           E   +E+E LL     E V  + + G+ GI K T+A  V+ +  + F+G  F  ++ +  
Sbjct: 236 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNS 295

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQ---LNRLARKKVRIVFDDVT------------ 260
           +  G+  L +KLL +L  DG   ++ +Q    N L  KK+ IV D+VT            
Sbjct: 296 KRYGLPYLYQKLLHKLL-DGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKK 354

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR++I TRDK++L+   A+  Y +  L   +A +LFC   FG  +     ++L+
Sbjct: 355 NVYRQGSRIVIITRDKKLLQK-NADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLS 413

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
           +  + YA+G+PLALK+LG  L       W+  +  L++ P  E+++ LK SY +LDD QK
Sbjct: 414 NDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALDDDQK 473

Query: 377 NVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPG 436
           +VFLDIAC                         F+RI MHDLL  MG+EI +++SI   G
Sbjct: 474 SVFLDIAC-------------------------FFRIEMHDLLHAMGKEIGKEKSIRKAG 508

Query: 437 KRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK 496
           +R RLW+HKDI  +L+ NTGTE + GI L+M++V R I +   AF+ + KL+FL+F+   
Sbjct: 509 ERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEV-RRIKLFPAAFTMLSKLKFLKFHSSH 567

Query: 497 NK--CMVSHL---EGVP---FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
               C   H+     VP     E+ +L W   P   L  +   ++LV L +  + ++QLW
Sbjct: 568 CSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIKQLW 627

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWV 606
           +D ++   SL       + ++++   L R     +NLE L ++G T  +L  S+ +++ +
Sbjct: 628 ED-EKNTESLRWVDLGQSKDLLNLSGLSR----AKNLERLDLEGCTSLDLLGSVKQMNEL 682

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLP 666
             L L + ++LE +P+  + +  L  L +S C +L+    +  ++  L     T++E++ 
Sbjct: 683 IYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIESLHLEG-TAIERVV 740

Query: 667 AGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
             + S+ S++ +NL  C  LK  PN+L ++
Sbjct: 741 EHIESLHSLILLNLKNCEKLKYLPNDLYKL 770



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 149/351 (42%), Gaps = 60/351 (17%)

Query: 556  LCTFKTPITFEIIDCKMLERLPDELEN-LEYLTVKGTTIRELPESLGRLSWVKRLILSNN 614
            +C+F  P+   I D   L  LP    + L  L +    I +LP+    L  ++ L LS N
Sbjct: 821  ICSFCRPV---IDDSTGLVVLPFSGNSFLSDLYLTNCNIDKLPDKFSSLRSLRCLCLSRN 877

Query: 615  SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK------LPAG 668
             N+E +PESI  L  L  L + HC RL++LP LP NL  L A  C SLE       +P  
Sbjct: 878  -NIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYLDAHGCGSLENVSKPLTIPLV 936

Query: 669  LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL-------YEERGI----KKSMYFP 717
               M +      C   KL+  E  +IV    +K  L       +  +G+      ++ FP
Sbjct: 937  TERMHTTFIFTDC--FKLNQAEKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPLVAVCFP 994

Query: 718  GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWD 777
            G++IP WF HQ MGS       P      +K I  + C VV F             +   
Sbjct: 995  GHDIPSWFSHQKMGSLIETDLLP--HWCNSKFIGASLCVVVTF----------KDHEGHH 1042

Query: 778  GNVYAVCCDWKRKSE-GHL--YSWFLG-----------KISYVESDHVFLGCNSFGGEYF 823
             N  +V C  K KS+ G    +S+ LG           +   + SDHVF+  N+     F
Sbjct: 1043 ANRLSVRCKSKFKSQNGQFISFSFCLGGWNESCGSSCHEPRKLGSDHVFISYNNCNVPVF 1102

Query: 824  GPNYD----------EFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
              + +            SF  + +      LE  E+ +CG++F+YA+D  D
Sbjct: 1103 KWSEETNEGNRCHPTSASFEFYLTDETERKLECCEILRCGMNFLYARDEND 1153


>gi|15235932|ref|NP_193429.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302808|emb|CAB46049.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268447|emb|CAB80967.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658428|gb|AEE83828.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1041

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 257/814 (31%), Positives = 378/814 (46%), Gaps = 142/814 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F SHL   L  +SI TF+D  ++R   I+  L+  I  + I+I+I
Sbjct: 13  YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELITAIREARISIVI 72

Query: 62  FSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           FSE YASS W                        FY VDPSHVRKQ   FG  F +  + 
Sbjct: 73  FSENYASSTWCLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCED 132

Query: 99  FPEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            PE  K RW  ALT+ ++L+G D      E+ ++ +IANDV  +L          LVG+E
Sbjct: 133 KPEDQKQRWVKALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKL-FPLPKGFGDLVGIE 191

Query: 158 CSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAE 215
             IE I+  LC+ S E    + IWG  GI K TI  A+F+++S  F   ++         
Sbjct: 192 DHIEAIKLKLCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGS 251

Query: 216 ETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT------------ 260
           +  G+K   +K+LLSE+   KD  + +      RL  KKV I+ DDV             
Sbjct: 252 DVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKA 311

Query: 261 ----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
               SGSR+I+ T+D+Q+LK    +  Y +K      A K+ CQ+AFG         EL 
Sbjct: 312 EWFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELA 371

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            +  K A  +PL L VLG  L  RSKE W   + +L+   + +I + L++SY  LD   +
Sbjct: 372 FEVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQ 431

Query: 377 NVFLDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRMHDLLRD 421
           ++F  IA    G    +V SI D                 KSLI L     I MH+LL+ 
Sbjct: 432 DIFHYIAWLFNGW---KVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQK 488

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNSYA 480
           +  EI R+ES  +PGKR  L + ++I  V   NT  E + +G+   +N    +IH +S+ 
Sbjct: 489 LATEIDREESNGNPGKRRFLENAEEILDVFTDNTVNENSFQGM---LNLQYLKIHDHSWW 545

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
             +  ++R           + + L  +P  +++ L W  CPLK L  N  AE LV L+M 
Sbjct: 546 QPRETRMR-----------LPNGLVYLP-RKLKWLWWDNCPLKRLPSNFKAEYLVELRMV 593

Query: 539 CTKVEQLWDDVQRLPS----------------SLCTFKTPITFEIIDCKMLERLPDEL-- 580
            + +E+LW+  Q L S                 L         +I DC++LE  P  L  
Sbjct: 594 NSDLEKLWNGTQLLGSLKKMILRNSKYLKEIPDLSYAMNLERLDISDCEVLESFPSPLNS 653

Query: 581 ENLEYLT-VKGTTIRELPESLGRLS------------WVK-------------------- 607
           E+LEYL  ++   +R  PE++ ++S            W K                    
Sbjct: 654 ESLEYLDLLRCPKLRNFPETIMQISPYGIDIDVADCLWNKSLPGLDYLDCLRRCNPSKFL 713

Query: 608 -----RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCT 660
                 L L  N+ LE++ E ++ L KL  + +S CE L  +P+L    NL  L+  NC 
Sbjct: 714 PEHLVNLKLRGNNMLEKLWEGVQSLGKLERMDLSECENLIEIPDLSKATNLVNLNLSNCK 773

Query: 661 SLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
           SL  LP+ + +   +  + +  C  LK+ P +++
Sbjct: 774 SLVTLPSTIGNHQKLYTLEMKECTGLKVLPMDVN 807


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 281/934 (30%), Positives = 440/934 (47%), Gaps = 175/934 (18%)

Query: 19  SHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERYASSRWF----- 72
           + L +    + I  ++DD +L RG  I  +L   IE S  ++IIFS  YASS W      
Sbjct: 85  ASLANTYHTRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRDYASSPWCLDELV 144

Query: 73  ------------------------FYRVDPSHV----RKQSHSFGRHFSRLRKRFPEKMK 104
                                   FY VDPS V    RK   +F  H    ++   EK++
Sbjct: 145 KIVQCMKEMGQTVLPVFYDVDPSEFYDVDPSEVIERKRKYEEAFVEHEQNFKENL-EKVR 203

Query: 105 RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE 164
            WK+ L+  A+LSG+D    R E + I+ I   +  +L  T  + NK LV ++  +E + 
Sbjct: 204 NWKDCLSTVANLSGWDVRN-RNELESIKIIVEYISYKLSITLPTINKKLVAIDSRVEVLN 262

Query: 165 SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDL 223
             +         + I G+GGI K T+A  V+++I   FEGS F  NVRE   E  G + L
Sbjct: 263 GYIGEEVGKAIFIGICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRL 322

Query: 224 QKKLLSELSKD-----GNMRNIESQLNRLARKKVRIVFDDVTS----------------G 262
           Q++LLSE+  +      + R IE    RL  KK+ ++ DDV                  G
Sbjct: 323 QEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPG 382

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SR+IIT+RDK+V+     N+ Y  ++L   DA  LF Q A   DH     +EL+ + + Y
Sbjct: 383 SRIIITSRDKKVVTGNNNNRIYEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGY 442

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A G+PLAL+V+G +L  RS   W+SA+ ++  IPH +I +VL+IS+D L +S K +FLDI
Sbjct: 443 ANGLPLALEVIGSFLYDRSIPEWKSAINRMNEIPHGKIIDVLRISFDGLHESDKKIFLDI 502

Query: 383 ACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           ACFL G   D +  I ++              KSLI++    ++ MH+LL+ MG+EIVR 
Sbjct: 503 ACFLMGFKIDRITRILESRGFHAGIGIPILIEKSLISVSR-DQVWMHNLLQIMGKEIVRC 561

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           ES   PG+R+RLW ++D+   L  NT +E  E +S                     KLRF
Sbjct: 562 ESPEEPGRRSRLWTYEDVCLALMDNTLSEGPEDLS--------------------NKLRF 601

Query: 490 LRFYGDKNKCMVSHLEGVPFAEVRHLE------WPQCP----LKTLNICAEKLVSLKMP- 538
           L ++   +K + + L+     E+          W  C     LK +N+ +  L  +K P 
Sbjct: 602 LEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINL-SNSLNLIKTPD 660

Query: 539 CTKVEQLWD-------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
            T +  L +        +  +  SL   K      ++ C+ +  LP   E+E+L+  T+ 
Sbjct: 661 FTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEMESLKVFTLD 720

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           G + +   P+ +G ++ +  L L + + +  +  SIRHL  L  L +++C+ L+++P   
Sbjct: 721 GCSKLERFPDIVGNMNCLMVLRL-DGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPS-- 777

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER 708
            ++G L      SL+KL            ++ C+ LK  P  L ++        SL E  
Sbjct: 778 -SIGCLK-----SLKKLD-----------LSCCSALKNIPENLGKV-------ESLEEFD 813

Query: 709 GIKK-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLIS-FAFCAVVVFPA 762
           G         +  PGNEIP WF H+S GSS +++     P+G     +  AF A    P+
Sbjct: 814 GFSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQV----PSGRMGFFACVAFNANDESPS 869

Query: 763 FLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFG--G 820
              +F+  +G +++      +C ++    EGHL+           SDH++L   SF    
Sbjct: 870 LFCHFK-ANGRENYPS---PMCINF----EGHLF-----------SDHIWLFYLSFDYLK 910

Query: 821 EYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGI 854
           E     ++ FS  I  SFH   Y +  +V  CG+
Sbjct: 911 ELQEWQHESFS-NIELSFH--SYEQGVKVNNCGV 941


>gi|227438293|gb|ACP30636.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1770

 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 256/898 (28%), Positives = 404/898 (44%), Gaps = 159/898 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL        I  F D  + R   I+ +L   I  S I+I++
Sbjct: 14  YRVFTSFHGPDVRKTFLSHLRKQFGCNGISMFNDQAIERSHTIAPALTQAIRESRISIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            ++ YASS W                      FY VDPS VRKQ+  FG+ F +  R + 
Sbjct: 74  LTKNYASSSWCLDELLEILKCKEEIGQIVMTIFYGVDPSDVRKQTGDFGKVFKKTCRGKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ +RW  ALT+  +++G        ES++IE+IA DV  +L+AT     + +VG+E  
Sbjct: 134 EEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFEDMVGIEAH 193

Query: 160 IEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           +++++SLL    EG   +  I G  GI K TIA A+ +++S  F+ + F  N+R +  +G
Sbjct: 194 LDKMQSLLHSDEEGGAMIVGICGPSGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSG 253

Query: 219 GIKD------LQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS--------- 261
           G+ +      LQ+ LLS++     MR  ++ +   RL  +KV I+ DDV           
Sbjct: 254 GLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLQQLEALAD 313

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+TT D+++L+       Y +      +A K+FC++AF        +  
Sbjct: 314 ETNWFGDGSRIIVTTEDQELLELHGITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYEN 373

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L ++A +    +P  L+V+G  L G+ ++ WES + +LE     +IE VL++ YDSL + 
Sbjct: 374 LAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDSLHEK 433

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
            + +F  IA F   E+   V ++               A KSLI +     + MH LL+ 
Sbjct: 434 DQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQ 493

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           +GR+ ++++    P KR  L    DI  VL+ ++G+ ++ GIS DM+ +  ++ +++  F
Sbjct: 494 VGRQAIQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVF 550

Query: 482 SKMPKLRFLRFYGDKNKCMVS-HL-EGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSLK 536
             M  LRFLR Y  +    V  HL E + F   ++ L W   P K L    C E LV L 
Sbjct: 551 KSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHLVELH 610

Query: 537 MPCTKVEQLWDDVQRLP--------SSLCTFKTP-----ITFEIID-------------- 569
           +  T++EQLW+  Q L         S LC  + P        EI+D              
Sbjct: 611 LTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSV 670

Query: 570 -------------CKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSN 613
                        CK L+ +P    L +LE L + G+  +RELP+    +S   R +   
Sbjct: 671 GNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPD----ISTTIRELSIP 726

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPA------ 667
            + LE   ES R  S L  L I  C         P    L+  R+ T +E++P       
Sbjct: 727 ETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLH 786

Query: 668 GLSSMS-----------------SVLYVNLCNFLK-LDPNELSEIVKD---------GWM 700
           GL  +S                 + L V  C  L+ L+P      ++D         G  
Sbjct: 787 GLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEPFPFGSRIEDLSFLDCFRLGRK 846

Query: 701 KHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
              L  ++  +  +  PG  +P  F H+++G+   + +   R         F  CAV+
Sbjct: 847 ARRLITQQSSR--VCLPGRNVPAEFHHRAIGNFVAICSNAYR---------FKICAVI 893



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 199/667 (29%), Positives = 317/667 (47%), Gaps = 97/667 (14%)

Query: 127  ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGI 185
            ES++IE+IA DV  +L++T  +  + +VG+E  +E+++SLL +  EG    + I G  GI
Sbjct: 1081 ESEMIEKIARDVSNKLNSTVSTDFEDMVGIEAHLEKMQSLLHLDDEGGAMFVGICGPAGI 1140

Query: 186  SKITIAGAVFNKISRHFEGSYFALNVREA------EETGGIKDLQKKLLSELSKDGNMR- 238
             K TIA A+ +++S  F+ S F  N+R +      +E G    LQ+ LLS++     MR 
Sbjct: 1141 GKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRI 1200

Query: 239  -NIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
             ++ +   RL  +KV I+ DDV    ++     + +     W     R+  ++  DA ++
Sbjct: 1201 YHLGAIPERLCDQKVLIILDDVDDLKQLEALADETK-----WFGDGSRVILMLELDARQI 1255

Query: 298  FCQWAFGGDHLDASH--IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
            FC+ AF    L A H   +L ++ +     +PL L+V+G  L  +  + WE+ +++LE  
Sbjct: 1256 FCRIAF--RQLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENS 1313

Query: 356  PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------K 402
             + +IE VL++ YD+L    + +F  IACF   +  D V ++   S             K
Sbjct: 1314 LNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYK 1373

Query: 403  SLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEG 462
            SLI +     I MH LL+ +GRE V    +  P KR  L     I  VL+ +  + ++ G
Sbjct: 1374 SLIQISAEGTIVMHKLLQQVGREAVH---LQEPRKRQILIDAHQICDVLENDYDSASVMG 1430

Query: 463  ISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVS-HL-EGVPFAE-VRHLEWPQ 519
            IS D + +   + +++ AF  M  LRFL  Y  +    V  HL E + F   +R L W  
Sbjct: 1431 ISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEV 1490

Query: 520  CPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
             P K L   +  E LV L    +K+EQLW  +Q           P+T             
Sbjct: 1491 YPGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQ-----------PLT------------- 1526

Query: 578  DELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
                NL+ + + G+ +++E+P+ L   + +KRL L+   +L  IP SI  L KL  L I+
Sbjct: 1527 ----NLKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEIN 1581

Query: 637  HCERLQTLPELPCNLGLLSARNCTSLEKLP-AGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
             C  LQ  P         S  N  SLE L   G   +  + YV+  + +  D      ++
Sbjct: 1582 LCISLQVFP---------SHLNLASLETLEMVGCWQLRKIPYVSTKSLVIGD-----TML 1627

Query: 696  KDGWMKHSLYEERGIKKS---MYFPGNEIPKWF-RHQSMGSSATLKTRPPRPAGYNKLIS 751
            ++      L  +R I +     YFPG E+P  F  H+S GSS T+     RPA    +  
Sbjct: 1628 EEFPESLCLEAKRVITQQSFRAYFPGKEMPAEFDDHRSFGSSLTI-----RPA----VCK 1678

Query: 752  FAFCAVV 758
            F  C V+
Sbjct: 1679 FRICLVL 1685


>gi|3947733|emb|CAA08797.1| NL25 [Solanum tuberosum]
          Length = 533

 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 187/520 (35%), Positives = 290/520 (55%), Gaps = 77/520 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG+DTR  FTSHL   L  + I TF DD+ L +GD+I + LL  IE S +A++
Sbjct: 21  YHVFLSFRGDDTRKTFTSHLFEGLKHRGIFTFQDDKRLEKGDSIPEELLKAIEESQVALV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+SRW                      FY VDPS VR Q+ SF   FS+ + R+
Sbjct: 81  IFSKNYATSRWCLNELVKIMECKEVKKQIVMPVFYDVDPSDVRHQTGSFAEAFSKHKSRY 140

Query: 100 PEKM------KRWKNALTEAADLSGFDSNVI-RPESKLIEEIANDVLKRLDATFQSKNKG 152
            + +      + W+ AL+ AADLSG  +NV  R ES+ I E+ + V  +L  T  S ++ 
Sbjct: 141 KDDVDGMQMVQGWRTALSAAADLSG--TNVPGRIESECIRELVDAVSSKLCKTSSSSSEY 198

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
            VG++  ++E++SLL + S  V  L IWG+GG+ K T+A AVF+ +S  F+ + F  NV+
Sbjct: 199 TVGIDTHLKEVKSLLEMESGDVRILGIWGMGGVGKTTLARAVFDTLSPRFQYASFLENVK 258

Query: 213 EAEETGGIKDLQKKLLSEL-SKDGNMRNIESQLNRLARKKVR-----IVFDDVT------ 260
           E      I ++Q KLLSEL  +D    + +++  RL  K++R     IV DD+       
Sbjct: 259 ET----NINEIQNKLLSELLREDKKHVDNKTEGKRLMAKRLRFMKVLIVLDDINHCDHLE 314

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     SGSR+I TTR++++L     N  +++  L+  DA +LF  +AF G     
Sbjct: 315 YLAGDLCWFGSGSRIIATTRNREIL--GMNNVVHQVTTLLEPDAIQLFNHYAFKGLFSPD 372

Query: 311 SHIE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
            H++ L  +A+ +A+G+PLALK+ G +L  + K +W  A+  +      ++   LKIS++
Sbjct: 373 EHMKKLALEAVSHAKGLPLALKLWGIWLNNKDKTLWREAVDMIRRESSEDVVNNLKISFE 432

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
            L D +K +FLDIACF  G  +D+ I I  +              KSL+++  +  ++MH
Sbjct: 433 GLQDKEKTIFLDIACFFRGMRKDKTIEILKSYDLDAHIRLHGIIEKSLVSISEYETLQMH 492

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
           DL++DMGR +V+++     G R+R+W+ +D   V+  + G
Sbjct: 493 DLIQDMGRYVVKEQ----KGSRSRVWNVEDFEDVMMDSMG 528


>gi|224133148|ref|XP_002321494.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222868490|gb|EEF05621.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 538

 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 189/510 (37%), Positives = 275/510 (53%), Gaps = 59/510 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR  FT +L+  LS + I+ F+DD  + +GD I+ +L+  IE S ++II
Sbjct: 20  WDVFLSFRGEDTRHGFTKNLYDSLSKQDIRVFLDDSGMNQGDEIAPTLMEAIEDSALSII 79

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF-PEK 102
           I S RYA+S W                  FY+VDPSHVR+Q     + F    +RF  EK
Sbjct: 80  ILSPRYANSHWCLEELARICELRRLILPVFYQVDPSHVRRQKGPLEQDFMNHMERFGEEK 139

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           + +W+ A+ +   +SGF  +  R E +LI  + N V+  L  T        VG++  +E+
Sbjct: 140 VGKWREAMYKVGGISGFVFDT-RSEDQLIRRLGNRVMTELRKTPVGIATYTVGLDSRVED 198

Query: 163 IES-LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEETGGI 220
           ++   +   S  V  L + G+GGI K T+A A+FNK+  HFE   F LNV++ ++E GG+
Sbjct: 199 LKKRFIDDKSNRVQVLGLHGMGGIGKTTLATALFNKLVGHFESRSFILNVKDISKEDGGL 258

Query: 221 KDLQKKLLSELSKDGNM-RNIESQLNRLA----RKKVRIVFDDVTS-------------- 261
             LQ KLL +LS +  +  NI+  +  +      K+V IV DDV                
Sbjct: 259 VKLQNKLLRDLSPNWPLVNNIDKGVAAIKMLVHEKRVLIVLDDVDDVSQLNALVGNRSWF 318

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
             GSRVI+TTR+K VL     N+ Y ++EL   +A +LF   A   D     ++ ++ + 
Sbjct: 319 GEGSRVIVTTRNKAVLAEHLVNEFYEVRELGDPEALQLFSYHALRKDKPTEEYMNISKEI 378

Query: 320 IKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
           +    G+PLAL+V G  L   R    WE A++KL+ I    +++VL+ISYD LD+  K+V
Sbjct: 379 VSLTGGLPLALEVFGSTLFNERGLNRWEDALKKLQRIRPHNLQDVLRISYDELDEDGKHV 438

Query: 379 FLDIAC--FLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMG 423
           FLDIAC  F  G  R+E I I                SK LI +     + MHD LRDMG
Sbjct: 439 FLDIACLFFKMGMKREEAIDILKGCGFSAETVIRVLTSKCLIKIREDDELWMHDQLRDMG 498

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKK 453
           R+IV+ E++  PG R+RLW   +I   L +
Sbjct: 499 RQIVQHENLADPGGRSRLWDRGEIMSTLMR 528


>gi|297742842|emb|CBI35600.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 204/558 (36%), Positives = 294/558 (52%), Gaps = 70/558 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRGEDTR +FT HL++ L  K I TF D++L RG+ I+  LL  IE S  +I++
Sbjct: 14  HDVFLSFRGEDTRYDFTDHLYNALVGKGIITFRDEKLKRGEKIAPKLLNAIEKSRSSIVV 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA SRW                      FY VDPS VRKQ+  FG  F++  + + 
Sbjct: 74  FSKTYADSRWCLDELAKIIECSRKYRQIVFPIFYHVDPSDVRKQTGRFGEAFTKYEENWK 133

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL---DATFQSKNKGLVGVE 157
            K++ W+ ALTEA +LSG+  N    ES+ I++I   +  R+      F   N  LVG++
Sbjct: 134 NKVQSWREALTEAGNLSGWHVNE-GYESEHIKKITTTIANRILNCKPLFVGDN--LVGMD 190

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
              ++I   L + S  V  + I GIGGI K TIA  ++N+IS+ FE + F  + ++  + 
Sbjct: 191 SHFKKISLGLHMESNDVHMVGICGIGGIGKTTIARYIYNQISQGFECNSFLEDAKKVYKK 250

Query: 218 GGIKDLQKKLLSELSKDGN--MRNIESQL----NRLARKKVRIVFDDVT----------- 260
            G+  LQK LL+++ K  N  + NI+       N L  +K  IV DDV            
Sbjct: 251 KGLARLQKLLLNDIQKGENSKISNIQQGAQVIQNSLYHRKALIVLDDVDDDMDNLDFLVG 310

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITTRDK+ L     N  Y ++ L   +A +LF + AF  +        
Sbjct: 311 NHAWYGEGSRIIITTRDKRCLTMLNVNYVYNVEGLDSNEAFELFSRHAFRSNLPKEDFRI 370

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
             +  I Y +G+PLALKVLG  LCG++K  W S + KLE  P ++I  VLKIS+D LD +
Sbjct: 371 FLNPVINYCEGLPLALKVLGSLLCGKTKGEWTSELHKLEKEPEMKIHNVLKISFDGLDTT 430

Query: 375 QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRD 421
           Q+ + LDIACF +GE +D    I+D               + LI +  + R+RMH L+  
Sbjct: 431 QQMILLDIACFFQGEDKDFASKIWDGYELYGEINIGVLLERCLITIS-YNRLRMHGLIEK 489

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE------IH 475
           M ++IVR++      K +RLW+  DIY       G E +E ISLD+++   +      + 
Sbjct: 490 MCKKIVREQHGKDTSKWSRLWNPDDIYYAFVSEEGMENVETISLDLSRSKEKWFNTKIVA 549

Query: 476 MNSYAFSKMPKLRFLRFY 493
                F KM  LR L+ Y
Sbjct: 550 QMKKVFPKMKNLRLLKVY 567


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 241/792 (30%), Positives = 377/792 (47%), Gaps = 103/792 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R    SH+      K I  FID+ + R  +I   L   I+ S IAI++
Sbjct: 94  HHVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVL 153

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 154 LSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKT 213

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G  S   R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 214 KEYVERWRKALEDVATIAGEHSRNWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMRA 273

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N+R      
Sbjct: 274 HMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRP 333

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 334 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 393

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++K     +A ++FC  AFG         E
Sbjct: 394 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQPHEGFDE 453

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL LKVLG  L G+SK  WE  + +L+      I  +++ SYD L D 
Sbjct: 454 IAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDGLCDE 513

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD--LFY--RIRMHD 417
            K + L IAC    E   +V  +               A KSLI++D    Y   I MH 
Sbjct: 514 DKYLLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYGDTINMHT 573

Query: 418 LLRDMGREIVRKESINHP-GKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIH 475
           LLR  GRE  RK+ + H   KR  L   +DI +VL  +T  +    GI+ D+      ++
Sbjct: 574 LLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLFGTQDYLN 633

Query: 476 MNSYAFSKMPKLRFLRFYG--DKNKCMVSHLEGVPFA-EVRHLEWPQ----CPLKTLNIC 528
           ++  A  +M    F+R        +  ++  + +  + ++R L+W      C   T N  
Sbjct: 634 ISEKALERMNDFEFVRINALIPTERLQLALQDLICHSPKIRSLKWYSYQNICLPSTFN-- 691

Query: 529 AEKLVSLKMPCTKVEQLW-----------------DDVQRLPSSLCTFKTPITFEIIDCK 571
            E LV L M  +K+ +LW                 +D++ LP +L T       ++ DC 
Sbjct: 692 PEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCS 750

Query: 572 MLERLPDELENLEYLT----VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            L  LP  +E L  L      + +++ ELP S G  + ++ L L N S+LE++P SI + 
Sbjct: 751 SLVELPSSIEKLTSLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSSLEKLPPSI-NA 808

Query: 628 SKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNF 683
           + L  L + +C R+  LP  E   NL  L   NC+SL +LP  + + +++  +N+  C+ 
Sbjct: 809 NNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSS 868

Query: 684 LKLDPNELSEIV 695
           L   P+ + +I 
Sbjct: 869 LVKLPSSIGDIT 880


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 240/715 (33%), Positives = 350/715 (48%), Gaps = 133/715 (18%)

Query: 125 RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE-------GVCKL 177
           R ES+ I+ IA  +  +L  T  + +K LVG++  ++ +     IG E       G+C  
Sbjct: 92  RNESESIKIIAEYISYKLSITLPTISKKLVGIDSRLQVLNGY--IGEEVGKAIFIGIC-- 147

Query: 178 RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--AEETGGIKDLQKKLLSELSKD- 234
              G+GG+ K T+A  V+++I   FEGS F  NV+E  A E G  + LQ++LLSE+  + 
Sbjct: 148 ---GMGGLGKTTVARVVYDRIRWQFEGSCFLANVKEDFAREDGP-RRLQEQLLSEILMER 203

Query: 235 ----GNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQV 274
                + R IE    RL  KK+ ++ DDV                  GSR+IIT+RDKQV
Sbjct: 204 ASVWDSYRGIEMIKRRLRLKKILLILDDVDEKEQLEFLAAESKWFGPGSRIIITSRDKQV 263

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
           L      + Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLAL+V+G
Sbjct: 264 LTRNGVARIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYATGLPLALEVIG 323

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV 394
            ++ GRS   W SA+ +L  IP  EI +VL+IS+D L +S K +FLDIACFL G   D +
Sbjct: 324 SFMHGRSILEWGSAINRLNDIPDREIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRI 383

Query: 395 ISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRL 441
             I ++              +SLI++    ++ MH+LL+ MG+EIVR ES   PG+R+RL
Sbjct: 384 TRILESRGFNAGIGISVLIERSLISVSR-DQVWMHNLLQIMGKEIVRCESPEEPGRRSRL 442

Query: 442 WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV 501
           W +KD+   L  NTG E IE I LDM  + +E   N  AFSKM +LR L+ +       V
Sbjct: 443 WTYKDVCLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSRLRLLKIHN------V 495

Query: 502 SHLEGVPFA---EVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWD--------D 548
              EG P A   E+R LEW   P K+L  C   ++LV L M  + +EQLW          
Sbjct: 496 QLSEG-PEALSNELRFLEWNSYPSKSLPACFQMDELVELHMANSSIEQLWYGYKSAVNLK 554

Query: 549 VQRLPSSLCTFKTPITFEIID--------CKMLERLPDEL---ENLEYLT-VKGTTIREL 596
           +  L +SL   KTP    I++        C  L  +   L   + L+Y+  VK  +IR L
Sbjct: 555 IINLSNSLNLIKTPDLTGILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRIL 614

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH------CERLQTLPELPCN 650
           P +L  +  +K   L   S LE+ P+ + +++ LT L +        C  +  L      
Sbjct: 615 PNNL-EMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHL----IG 669

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEER 708
           LGLLS  +C +LE +P+ +  + S+  ++L  C+ LK  P  L ++        S    R
Sbjct: 670 LGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIR 729

Query: 709 GIKKSMYF-----------------------------------PGNEIPKWFRHQ 728
            +  S++                                    PGNEIP WF HQ
Sbjct: 730 QLPASIFLLKNLKVLSSDGCERIAKLPSYSGLSNPRPGFGIAIPGNEIPGWFNHQ 784



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 8  FRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEAS 55
          FR +DTR+NFTSHL+  L  + +  ++DD +L RG  I  +L   IE S
Sbjct: 43 FRDKDTRNNFTSHLYSNLKQRGVDVYMDDRELERGKTIEPALWKAIEES 91


>gi|20260632|gb|AAM13214.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 672

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 214/703 (30%), Positives = 353/703 (50%), Gaps = 94/703 (13%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           +VF SF G D R  F SHL    +   I  F D  + R   I+ +L+  I  S I+I++ 
Sbjct: 1   NVFPSFHGGDIRKTFLSHLRKQFNSNGITMFDDQGIERSQTIAPALIQAIRESRISIVVL 60

Query: 63  SERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRFPEKMK 104
           S+ YASS W                  FY VDPS VRKQ+  FG+ F +  + +  E+ +
Sbjct: 61  SKNYASSSWCLNELVEILKCKDVVMPIFYEVDPSDVRKQTGDFGKAFKNSCKSKTKEERQ 120

Query: 105 RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE 164
           RW  AL    +++G  S     E+ +IE+IA DV  +L+AT        VG+E  I E+ 
Sbjct: 121 RWIQALIFVGNIAGEHSLKWENEADMIEKIAKDVSDKLNATPSKDFDAFVGLEFHIRELS 180

Query: 165 SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG----GI 220
           SLL +  E V  + I G  GI K TIA A+ + +S +F+ S F  NVR +   G    G+
Sbjct: 181 SLLYLDYEQVRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGLDEYGL 240

Query: 221 K-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------------G 262
           K DLQ++LLS++     MR  ++ +  +RL  +KV I+ DDV                 G
Sbjct: 241 KLDLQERLLSKIMNQKGMRIEHLGTIRDRLHDQKVLIILDDVNDLDLYALADQTTWFGPG 300

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SR+I+TT D ++L+    N  Y +      +A ++FC+ AF       + ++L ++  + 
Sbjct: 301 SRIIVTTEDNELLQKHDINNVYHVDFPSRKEALEIFCRCAFRQSSAPDTILKLAERVTEL 360

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
              +PL L V+G  L G++++ WE  +R+LEI    + E  L++ YDSL ++++ +FL I
Sbjct: 361 CGNLPLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQLRVGYDSLHENEQALFLSI 420

Query: 383 ACFLEGEHRDEVISIF-------------DASKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           A F   + R  V+++               A+KSLI++    +I MH+LL+ +GR+ +++
Sbjct: 421 AVFFNYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQHVGRQAIQR 480

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
           +    P KR+ L    +I  VL+ +T    + GIS D++++  E+ ++  AF ++  L+F
Sbjct: 481 Q---EPWKRHILIDADEICNVLENDTDARIVSGISFDISRIG-EVFLSERAFKRLCNLQF 536

Query: 490 LRF----YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSLKMPCTKVE 543
           LR     Y +KN+  +      P   +R L+W   P ++L+  +  E LV L M  + +E
Sbjct: 537 LRVFKTGYDEKNRVRIPENMEFP-PRLRLLQWEAYPRRSLSLKLNLEYLVELDMEGSLLE 595

Query: 544 QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT-TIRELPESLGR 602
           +LWD  Q                             L NL+ +++  +  +++LP+ L  
Sbjct: 596 KLWDGTQ----------------------------PLANLKKMSLSSSWYLKKLPD-LSN 626

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            + ++ L L    NL  +P S  +L KL +L +  C RL+ +P
Sbjct: 627 ATNLEELDLRACQNLVELPSSFSYLHKLKYLNMMGCRRLKEVP 669


>gi|15787887|gb|AAL07535.1| resistance gene analog PU3 [Helianthus annuus]
          Length = 770

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 225/712 (31%), Positives = 358/712 (50%), Gaps = 88/712 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR++F  HL+  L  + I+T+ DDQ L RG+ I  +LL  I+ S IA++
Sbjct: 83  HDVFLSFRGEDTRNSFVDHLYAALVQQGIQTYKDDQTLPRGERIGPALLKAIQESRIAVV 142

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S W                      FY VDPS VRKQ   +G+ F + ++  
Sbjct: 143 VFSQNYADSSWCLDELAHIMECMDTRGQIVIPIFYFVDPSDVRKQKGKYGKAFRKHKREN 202

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            +K++ W+ AL +A +LSG+  N    E+K I+EI   +  RL     + NK L+G+E  
Sbjct: 203 KQKVESWRKALEKAGNLSGWVINENSHEAKCIKEIVATISSRLPTLSTNVNKDLIGIETR 262

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +++++S L + S  V  + IWG+GG  K T+A A + +IS  FE      N+RE     G
Sbjct: 263 LQDLKSKLKMESGDVRIIGIWGVGGGGKTTLASAAYAEISHRFEAHCLLQNIREESNKHG 322

Query: 220 IKDLQKKLLSELSKDGNM---RNIE--SQLNRLARKKVRIVFDDVT-------------- 260
           ++ LQ+K+LS + K  ++     IE  S + R  R K  +V  D                
Sbjct: 323 LEKLQEKILSLVLKTKDVVVGSEIEGRSMIERRLRNKSVLVVLDDVDDLKQLEALAGSHA 382

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSR+IITTRD+ +L    A+  Y +  L   +A +LF + A+  D L   +  L+ 
Sbjct: 383 WFGKGSRIIITTRDEHLLTR-HADMIYEVSLLSDDEAMELFNKHAYREDELIEDYGMLSK 441

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
             + YA G+PLAL++LG +L  ++K+ W+SA+ KL+ IP+VE+ E LKISYD L+   + 
Sbjct: 442 DVVSYASGLPLALEILGSFLYDKNKDDWKSALAKLKCIPNVEVTERLKISYDGLEPEHQK 501

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINL-DLFYRIR----MHDLL 419
           +FLDIACF      DE + + DA              KSLI + D+ +  +    MHDL+
Sbjct: 502 LFLDIACFWRRRDMDEAMMVLDACNLHPRIGVKVLIQKSLIKVSDVRFSKQKVFDMHDLV 561

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            +M   IVR    NHP K +R+W  +DI  +         +E  +L              
Sbjct: 562 EEMAHYIVRGAHPNHPEKHSRIWKMEDIAYLCDMGEDAVPMETEALAFR----------- 610

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPC 539
            +   P L       D    +V++++ +P+  +R  E+P     + N    +L  L++  
Sbjct: 611 CYIDDPGLSNAVGVSD----VVANMKKLPW--IRFDEYPASSFPS-NFHPTELGCLELER 663

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIRELPE 598
           ++ ++LW   + LP +L      ++  +I     + LP     LE L ++G  ++ E+  
Sbjct: 664 SRQKELWHGYKLLP-NLKILDLAMSSNLITTPNFDGLP----CLERLDLEGCESLEEIHP 718

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           S+G    +  + +   S L+R    I+ +  L  L +S C  LQ  P++  N
Sbjct: 719 SIGYHKSLVYVDMRRCSTLKRFSPIIQ-MQMLETLILSECRELQQFPDIQSN 769


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1981

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 226/706 (32%), Positives = 358/706 (50%), Gaps = 88/706 (12%)

Query: 15   DNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW--- 71
            D+F   L      K I  F D+++ RG++IS  L+  I  S IA+I+ S  YASS W   
Sbjct: 1263 DSFNEALMKEFQRKGITPFNDNEIKRGESISPELVLAIRGSRIALILLSRNYASSSWCLD 1322

Query: 72   ------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEKMKRWKNALTE 112
                               FY+VDPS ++K +  FG  F +    +  E  +RW  AL +
Sbjct: 1323 ELAEIIKCREEFGQTVMVVFYKVDPSDIKKLTGDFGSVFRKTCAGKTNEDTRRWIQALAK 1382

Query: 113  AADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGS 171
             A L+G+ SN    E+ +IE+IA D+  +L+ +  S++   LVG+   +E +E LLC+ S
Sbjct: 1383 VATLAGYVSNNWDNEAVMIEKIATDISNKLNKSTPSRDFDELVGMGAHMERMELLLCLDS 1442

Query: 172  EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--------AEETGGIKDL 223
            + V  + IWG  GI K TIA  +F++ S  FE S F  N++E        +++      L
Sbjct: 1443 DEVRMIGIWGPSGIGKTTIARFLFSQFSDSFELSAFMENIKELMYRKPVCSDDYSAKLHL 1502

Query: 224  QKKLLSELSK--DGNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRV 265
            Q + +S++    D  + ++    NRL  KKV IV D++                  GSR+
Sbjct: 1503 QNQFMSQIINHMDVEVPHLGVVENRLNDKKVLIVLDNIDQSMQLDAIAKETRWFGHGSRI 1562

Query: 266  IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQG 325
            IITT+D+++LK    N  Y++      +A ++FC  A G         EL  +       
Sbjct: 1563 IITTQDQKLLKAHGINHIYKVDYPSTHEACQIFCMSAVGKKFPKDEFQELALEVTNLLGN 1622

Query: 326  VPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIAC- 384
            +PL L+V+G +  G SK+ W +A+ +L       I+ +LK SYD+L    K++FL IAC 
Sbjct: 1623 LPLGLRVMGSHFRGMSKQEWINALPRLRTHLDSNIQSILKFSYDALCREDKDLFLHIACT 1682

Query: 385  ----------------FLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIV- 427
                            FL+ + R  V+    A KSLI+++  + I+MH+LL  +GREIV 
Sbjct: 1683 FNNKRIENVEAHLTHKFLDTKQRFHVL----AEKSLISIEEGW-IKMHNLLELLGREIVC 1737

Query: 428  -RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPK 486
               ESI  PGKR  L   +DI +VL  +TG++++ GI  +  ++  E++++  AF  M  
Sbjct: 1738 HEHESIREPGKRQFLVDARDICEVLTDDTGSKSVVGIYFNSAELLGELNISERAFEGMSN 1797

Query: 487  LRFLRFYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
            L+FLR   D++  M     G+ +   ++R LEW + PL  L  N C E LV L M  +K+
Sbjct: 1798 LKFLRIKCDRSDKMYLP-RGLKYISRKLRLLEWDRFPLTCLPSNFCTEYLVELNMRHSKL 1856

Query: 543  EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPES 599
             +LW+       SL   K      +   K L+ LPD     NL+ L + G +++ ELP S
Sbjct: 1857 VKLWEG----NLSLGNLK---WMNLFHSKNLKELPDFSTATNLQTLILCGCSSLVELPYS 1909

Query: 600  LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +G  + +++L L   ++L  +P SI +L KL  + +  C +L+ +P
Sbjct: 1910 IGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCSKLEVVP 1955



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 224/779 (28%), Positives = 361/779 (46%), Gaps = 139/779 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R  F SH+      K I  FID+ + R  +I   L+  I  S IAI++
Sbjct: 53  HQVFPSFHGADVRKTFLSHVLEAFRGKGIDPFIDNSIERSKSIGPELVEAIRGSRIAIVL 112

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS W                      FY VDP+H++KQ+  FG+ F    K + 
Sbjct: 113 LSRNYASSSWCMNELVEIMKCKEDLGQIVITIFYEVDPTHIKKQTGDFGKVFKETCKGKT 172

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E++KRW+ AL   A ++G+ S+                    +  F++    L+G+   
Sbjct: 173 KEEIKRWRKALEGVATIAGYHSS--------------------NWDFEA----LIGMGAH 208

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E + +LL +  + V  + IWG  GI K TIA  + +++S+ F+ S   +N++E   +  
Sbjct: 209 MENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECYPSPC 268

Query: 220 IKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
           + +      LQ K+LS++   KD  + ++     RL  KKV +V DDV            
Sbjct: 269 LDEYSVQLQLQNKMLSKMINQKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDALAKE 328

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITT + ++L     N  Y+++     +A ++FC  AFG  H      EL
Sbjct: 329 TRWFGPGSRIIITTENLRLLMAHRINHIYKVEFSSTDEAFQIFCMHAFGQKHPYNGFYEL 388

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + +  + A G+PL LKV+G  L G SK+ W+  + +L      +IE +L  SY++L    
Sbjct: 389 SREVTELAGGLPLGLKVMGSSLRGMSKQEWKRTLPRLRTCLDGKIESILMFSYEALSHED 448

Query: 376 KNVFLDIACF--------LEGEHRDEVISIFD-----ASKSLINLDLFYRIRMHDLLRDM 422
           K++FL IACF        +E    D  + +       A KSLI++       MH LL  +
Sbjct: 449 KDLFLCIACFFNYQKIKKVEKHLADRFLDVRQGLYVLAEKSLIHIGT-GATEMHTLLVQL 507

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNT--GTEAIEGISLDMNKVNREI-HMNSY 479
           GREI   +S N P K   L   ++I + L   T   +  I G+  D++K   E+ +++  
Sbjct: 508 GREIAHTQSTNDPRKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVTNISEK 567

Query: 480 AFSKMPKLRFLRFYG---------------DKNKC----MVSHLEGV--PFAEVRHLEWP 518
              +M  L+F+RF G                 N C     V+ L+ +   F E+R L W 
Sbjct: 568 GLQRMSNLQFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRLLHWI 627

Query: 519 Q----CPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK-TPITFEIIDCKML 573
                C   T N   E LV L MP +    LW+  +    +L   K   +++ I     L
Sbjct: 628 NFRRLCLPSTFN--PEFLVELNMPSSTCHTLWEGSK----ALRNLKWMDLSYSI----SL 677

Query: 574 ERLPD--ELENLEYLTVK-GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
           + LPD     NLE L +K   ++ ++P  +G+L  ++ L L   +++  +P   ++++ L
Sbjct: 678 KELPDLSTATNLEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNVTGL 737

Query: 631 TFLFISHCERLQTLPELPCNLG-LLSARN----CTSLEKLPAGLSSMSSVLYVNLCNFL 684
             L ++ C    +L ELP ++G  ++ +N    C  L KLP     +S V + NL  F+
Sbjct: 738 QSLDLNEC---SSLVELPSSIGNAINLQNLDLGCLRLLKLP-----LSIVKFTNLKKFI 788



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 51/269 (18%)

Query: 522  LKTLNIC-AEKLVSLKMPCTKVEQLW-------DDVQRLPSSLCTFKTPITFEIIDCKML 573
            L+ LN+C    LV L      +  L+         ++ LPS++   K+    ++ DC   
Sbjct: 951  LQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNI-NLKSLERLDLTDCSQF 1009

Query: 574  ERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES---------- 623
            +  P+   N+E L + GT + E+P S+   SW  RL + + S  E++ E           
Sbjct: 1010 KSFPEISTNIECLYLDGTAVEEVPSSIK--SW-SRLTVLHMSYFEKLKEFSHVLDIITWL 1066

Query: 624  ------------IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
                        I+ +S+L  L +  C +L +LP+LP +L +++A  C SLE L    ++
Sbjct: 1067 EFGEDIQEVAPWIKEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCSYNN 1126

Query: 672  MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ-SM 730
              S+L  N     KL+      I+           +         PG E+P +F H+ + 
Sbjct: 1127 PLSLL--NFAKCFKLNQEARDFII-----------QIPTSNDAVLPGAEVPAYFTHRATT 1173

Query: 731  GSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            G+S T+K    RP   +  + F  C V++
Sbjct: 1174 GASLTIKLN-ERPISTS--MRFKACIVLI 1199



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 7/138 (5%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTV-KGTTIRELPESLGRLSWVK 607
           LPSS+         ++ +C  L +LP       NLE L + K +++ E+P S+G ++ + 
Sbjct: 821 LPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLW 880

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEK 664
           RL LS  S+L  +P S+ ++S+L  L + +C  L  LP       NL  L    C+SL +
Sbjct: 881 RLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVE 940

Query: 665 LPAGLSSMSSVLYVNLCN 682
           LP+ + +++++  +NLCN
Sbjct: 941 LPSSIGNITNLQELNLCN 958



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 7/144 (4%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKG-TTIRELPESLGRLSWV 606
           +LPS +         ++  C  L  +P  +    NL  L + G +++ ELP S+G +S +
Sbjct: 844 KLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISEL 903

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLE 663
           + L L N SNL ++P S  H + L  L +S C  L  LP       NL  L+  NC++L 
Sbjct: 904 QVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLV 963

Query: 664 KLPAGLSSMSSVLYVNLCNFLKLD 687
           KLP+ + ++  +  ++L    KL+
Sbjct: 964 KLPSSIGNLHLLFTLSLARCQKLE 987



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)

Query: 532  LVSLKMPCTKVEQLW-------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---E 581
            LV +      V  LW         +  LPSS+          + +C  L +LP       
Sbjct: 866  LVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHAT 925

Query: 582  NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
            NL  L + G +++ ELP S+G ++ ++ L L N SNL ++P SI +L  L  L ++ C++
Sbjct: 926  NLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQK 985

Query: 641  LQTLPELPCNLGL-----LSARNCTSLEKLPAGLSSMSSVLYVN 679
            L+ LP    N+ L     L   +C+  +  P  +S+    LY++
Sbjct: 986  LEALPS---NINLKSLERLDLTDCSQFKSFPE-ISTNIECLYLD 1025



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG-TTIRELPESLGRLSWVK 607
           +LP S+  F     F +  C  L  LP      NL+ L +   +++ ELP S+G    ++
Sbjct: 773 KLPLSIVKFTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQ 832

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEK 664
            L LSN S+L ++P  I + + L  L +  C  L  +P       NL  L    C+SL +
Sbjct: 833 NLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVE 892

Query: 665 LPAGLSSMSSVLYVNLCN 682
           LP+ + ++S +  +NL N
Sbjct: 893 LPSSVGNISELQVLNLHN 910



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LE 584
           C  KL  L++ C         +  LPS         + ++ +C  L  LP  + N   L+
Sbjct: 706 CVGKLGKLQVLCL---HGCTSILELPSFTKNVTGLQSLDLNECSSLVELPSSIGNAINLQ 762

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
            L +    + +LP S+ + + +K+ IL+  S+L  +P  + + + L  L + +C  L  L
Sbjct: 763 NLDLGCLRLLKLPLSIVKFTNLKKFILNGCSSLVELP-FMGNATNLQNLDLGNCSSLVEL 821

Query: 645 PEL---PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
           P       NL  L   NC+SL KLP+ + + +++  ++L  C+ L   P  +  + 
Sbjct: 822 PSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVT 877


>gi|145358924|ref|NP_199464.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008011|gb|AED95394.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1168

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 239/740 (32%), Positives = 359/740 (48%), Gaps = 81/740 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSF G+D R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  VYDVFLSFSGKDVRVTFRSHFLKELDRKLISAFRDNEIERSHSLWPDLEQAIKDSRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPS VR Q   FG  F +  KR  E+
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIIIPVFYGVDPSQVRYQIGEFGSIFEKTCKRQTEE 130

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSI 160
           +K +WK ALT+ A++ GFDS     E+K+IEEIANDVL +L  T  + + +  +G+E  I
Sbjct: 131 VKNQWKKALTDVANMLGFDSAKWDDEAKMIEEIANDVLAKLLLTSSTDSAENSIGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVREAE 215
             +  LL + +E V  + IWG  GI K TIA A+FN++SRHF  S      F    RE  
Sbjct: 191 ANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETY 250

Query: 216 ETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           +     D      LQ   LSE+   KD  + ++ +   RL  +K  I+ DD+        
Sbjct: 251 KGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDS 310

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+I+ T +KQ L+    +  Y +       A ++FCQ AFG +     
Sbjct: 311 LVGKTNWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             EL  +    A  +PL L V G  L GR KE W   + +L+      IEE LK+SYD++
Sbjct: 371 FEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAI 430

Query: 372 DDSQ-KNVFLDIACF--------LEGEHRDEVISIFDASKSLINLDLFY----RIRMHDL 418
            + + + +F  IAC         +E    D  + +  A ++L++  L +     + MH L
Sbjct: 431 GNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRL 490

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++ GR IVR +S ++PG+R  L    D   VL +  GT  + GISLD +KV+ E  ++ 
Sbjct: 491 LQETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVS-EFCVHE 549

Query: 479 YAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC-AEKL 532
            AF  M  L FL      F  ++ K  +         + + L W + PLK +       L
Sbjct: 550 NAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTFLRNL 609

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L+M  +K+E+LW+          +F      ++   K L+ +PD  +  N+E L    
Sbjct: 610 VKLEMHDSKLEKLWEGAM-------SFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGH 662

Query: 591 T-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ ELP S+  L+ +  L +     LE +P    +L  L +L  + C +L+T PE   
Sbjct: 663 CWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYLNFNECWKLRTFPEFAT 721

Query: 650 NLGLLSARNCTSLEKLPAGL 669
           N+  L     TS+E+ P+ L
Sbjct: 722 NISNLILAE-TSIEEYPSNL 740



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            +++ LP+ +   ++ ++  +  C  L+R PD   N++YL +  T I E+P  +     + 
Sbjct: 808  NLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLT 866

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ--TLPELPCNLGLLSARNCTSLEKL 665
            +L +     L+ +  +I  L  L  +  S+C  L    L   P  + ++ A N   + + 
Sbjct: 867  KLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRVDLSCYPSGVEMMKADNADIVSEE 926

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
                   S VL VN  + + LD   +            L+++  I  SM  PG E+P +F
Sbjct: 927  TTSSLPDSCVLNVNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYF 974

Query: 726  RH-----QSMGSSATLKTRPPRPAGYNK-LISFAFCAVV 758
             +     Q  G+S++L   P  P   ++    F  CAVV
Sbjct: 975  TYRTSDSQPFGTSSSLPI-PLLPTQLSQPFFRFRVCAVV 1012


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 241/792 (30%), Positives = 377/792 (47%), Gaps = 103/792 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R    SH+      K I  FID+ + R  +I   L   I+ S IAI++
Sbjct: 94  HHVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVL 153

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 154 LSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKT 213

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G  S   R E+ +IE+IA DV   L++   S++  GLVG+  
Sbjct: 214 KEYVERWRKALEDVATIAGEHSRNWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMRA 273

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            ++ +E LL +  + V  + IWG  GI K TIA  +FN++S  F+ S   +N+R      
Sbjct: 274 HMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRP 333

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 334 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 393

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++K     +A ++FC  AFG         E
Sbjct: 394 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQPHEGFDE 453

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL LKVLG  L G+SK  WE  + +L+      I  +++ SYD L D 
Sbjct: 454 IAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDGLCDE 513

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD--LFY--RIRMHD 417
            K + L IAC    E   +V  +               A KSLI++D    Y   I MH 
Sbjct: 514 DKYLLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYGDTINMHT 573

Query: 418 LLRDMGREIVRKESINHP-GKRNRLWHHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIH 475
           LLR  GRE  RK+ + H   KR  L   +DI +VL  +T  +    GI+ D+      ++
Sbjct: 574 LLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLFGTQDYLN 633

Query: 476 MNSYAFSKMPKLRFLRFYG--DKNKCMVSHLEGVPFA-EVRHLEWPQ----CPLKTLNIC 528
           ++  A  +M    F+R        +  ++  + +  + ++R L+W      C   T N  
Sbjct: 634 ISEKALERMNDFEFVRINALIPTERLQLALQDLICHSPKIRSLKWYSYQNICLPSTFN-- 691

Query: 529 AEKLVSLKMPCTKVEQLW-----------------DDVQRLPSSLCTFKTPITFEIIDCK 571
            E LV L M  +K+ +LW                 +D++ LP +L T       ++ DC 
Sbjct: 692 PEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCS 750

Query: 572 MLERLPDELENLEYLT----VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            L  LP  +E L  L      + +++ ELP S G  + ++ L L N S+LE++P SI + 
Sbjct: 751 SLVELPSSIEKLTSLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSSLEKLPPSI-NA 808

Query: 628 SKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNF 683
           + L  L + +C R+  LP  E   NL  L   NC+SL +LP  + + +++  +N+  C+ 
Sbjct: 809 NNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSS 868

Query: 684 LKLDPNELSEIV 695
           L   P+ + +I 
Sbjct: 869 LVKLPSSIGDIT 880


>gi|10177589|dbj|BAB10820.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1298

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 239/740 (32%), Positives = 359/740 (48%), Gaps = 81/740 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSF G+D R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 49  VYDVFLSFSGKDVRVTFRSHFLKELDRKLISAFRDNEIERSHSLWPDLEQAIKDSRIAVV 108

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPS VR Q   FG  F +  KR  E+
Sbjct: 109 VFSKNYASSSWCLNELLEIVNCNDKIIIPVFYGVDPSQVRYQIGEFGSIFEKTCKRQTEE 168

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSI 160
           +K +WK ALT+ A++ GFDS     E+K+IEEIANDVL +L  T  + + +  +G+E  I
Sbjct: 169 VKNQWKKALTDVANMLGFDSAKWDDEAKMIEEIANDVLAKLLLTSSTDSAENSIGIEDHI 228

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVREAE 215
             +  LL + +E V  + IWG  GI K TIA A+FN++SRHF  S      F    RE  
Sbjct: 229 ANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETY 288

Query: 216 ETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           +     D      LQ   LSE+   KD  + ++ +   RL  +K  I+ DD+        
Sbjct: 289 KGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDS 348

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+I+ T +KQ L+    +  Y +       A ++FCQ AFG +     
Sbjct: 349 LVGKTNWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEG 408

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             EL  +    A  +PL L V G  L GR KE W   + +L+      IEE LK+SYD++
Sbjct: 409 FEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAI 468

Query: 372 DDSQ-KNVFLDIACF--------LEGEHRDEVISIFDASKSLINLDLFY----RIRMHDL 418
            + + + +F  IAC         +E    D  + +  A ++L++  L +     + MH L
Sbjct: 469 GNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRL 528

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++ GR IVR +S ++PG+R  L    D   VL +  GT  + GISLD +KV+ E  ++ 
Sbjct: 529 LQETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVS-EFCVHE 587

Query: 479 YAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC-AEKL 532
            AF  M  L FL      F  ++ K  +         + + L W + PLK +       L
Sbjct: 588 NAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTFLRNL 647

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L+M  +K+E+LW+          +F      ++   K L+ +PD  +  N+E L    
Sbjct: 648 VKLEMHDSKLEKLWEGAM-------SFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGH 700

Query: 591 T-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ ELP S+  L+ +  L +     LE +P    +L  L +L  + C +L+T PE   
Sbjct: 701 CWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYLNFNECWKLRTFPEFAT 759

Query: 650 NLGLLSARNCTSLEKLPAGL 669
           N+  L     TS+E+ P+ L
Sbjct: 760 NISNLILAE-TSIEEYPSNL 778



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            +++ LP+ +   ++ ++  +  C  L+R PD   N++YL +  T I E+P  +     + 
Sbjct: 846  NLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLT 904

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ--TLPELPCNLGLLSARNCTSLEKL 665
            +L +     L+ +  +I  L  L  +  S+C  L    L   P  + ++ A N   + + 
Sbjct: 905  KLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRVDLSCYPSGVEMMKADNADIVSEE 964

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
                   S VL VN  + + LD   +            L+++  I  SM  PG E+P +F
Sbjct: 965  TTSSLPDSCVLNVNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYF 1012

Query: 726  RH-----QSMGSSATLKTRPPRPAGYNK-LISFAFCAVV 758
             +     Q  G+S++L   P  P   ++    F  CAVV
Sbjct: 1013 TYRTSDSQPFGTSSSLPI-PLLPTQLSQPFFRFRVCAVV 1050


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 243/765 (31%), Positives = 374/765 (48%), Gaps = 139/765 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFTSHL   L  K +  FIDD+L RG+ IS++L  +I+ + I+I+I
Sbjct: 17  YDVFLSFRGEDTRTNFTSHLDMALRQKGVNVFIDDKLERGEQISETLFKSIQEALISIVI 76

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY+VDPS +R Q+ SFG   ++ + +F 
Sbjct: 77  FSQNYASSSWCLDELVNIIECKKSKGQIVLPVFYKVDPSDIRTQTGSFGEALAKHQAKFQ 136

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS--KNKGLVGVEC 158
            K + W+ ALT AA+LSG+D    R E+ LI ++   VL  L+ T       K  V ++ 
Sbjct: 137 IKTQIWREALTTAANLSGWDLGT-RKEANLIGDLVKKVLSTLNRTCTPLYVAKYPVAIDS 195

Query: 159 SIEEIESLLCIG------------------SEGVCKLRIWGIGGISKITIAGAVFNKISR 200
            +E ++    I                      V  + I+GIGGI K T+A A++NKI+ 
Sbjct: 196 ILEYMKLRSHINLFEKSNKFHYQTQHEYEFDTDVNMVGIYGIGGIGKTTLAKALYNKIAS 255

Query: 201 HFEGSYFALNVREA-EETGGIKDLQKKLLSEL----SKDGNM-RNIESQLNRLARKKVRI 254
            FEG  F  NVREA ++  G+  LQ+ LL E+     K  N  R I    NRL  KKV I
Sbjct: 256 QFEGCCFLSNVREASKQFNGLAQLQESLLYEILTIYLKVVNFDRGINIIRNRLCSKKVLI 315

Query: 255 VFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLF 298
           V DDV                  GSR+I+TTR+K +L +   ++ + +  L    A +LF
Sbjct: 316 VLDDVDKLEQLEALVGGRDWFGQGSRIIVTTRNKHLLSSHGFDEIHNILGLNEEKAIELF 375

Query: 299 CQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV 358
              AF  +H  ++++ L+ +A  Y +G PLAL VLG +LC R +  W S + + E   + 
Sbjct: 376 SWHAFKKNHPSSNYLNLSKRATSYCRGHPLALVVLGSFLCTRDQVEWCSILDEFENSLNK 435

Query: 359 EIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDL 418
           +I+++L++S+D L+D                                             
Sbjct: 436 DIKDILQLSFDGLEDK-------------------------------------------- 451

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
              MG +IV  ES+   GKR+RLW  +D++ VL  N+GT+A++ I LD     + + ++ 
Sbjct: 452 ---MGHKIVCGESL-ELGKRSRLWLVQDVWDVLVNNSGTDAVKAIKLDFPNPTK-LDVDL 506

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLK 536
            AF KM  LR L     +N    + +E +P   ++ ++W   P  TL  C   + LV L 
Sbjct: 507 QAFRKMKNLRLLIV---QNARFCTKIEYLP-DSLKWIKWHGFPQSTLPSCFITKNLVGLD 562

Query: 537 MPCTKV---EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL-EYLTVKG 590
           +  + +   E+   D +RL     ++ T          +LE++PD     NL E   +  
Sbjct: 563 LQHSFIKTFEKRLKDCERLKHVDLSYST----------LLEQIPDFSAASNLGELYLINC 612

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
           T +  + +SL  L+ +  L L   SNL++ P     LS L  L +S+C++L+ +P+L   
Sbjct: 613 TNLGMIDKSLFSLNNLIVLNLDGCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIPDLSAA 672

Query: 650 -NLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
            NL  L  + CT+L  +   + S+  + +++L  C  L   P+ L
Sbjct: 673 SNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKLPSHL 717



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 8/129 (6%)

Query: 570 CKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           CK LE++PD     NLE L ++  T +R + ES+G L  +  L L   +NL ++P  +R 
Sbjct: 660 CKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKLPSHLR- 718

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL--CN 682
           L  L  L +S C +L++ P +  N+  L   +   T++++LP+ +  ++ +  +NL  C 
Sbjct: 719 LKSLQNLELSRCCKLESFPTIDENMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCT 778

Query: 683 FLKLDPNEL 691
            L   PN +
Sbjct: 779 NLISLPNTI 787



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLS 604
           ++ +LPS L   K+    E+  C  LE  P   + +++L +L +  T I+ELP S+G L+
Sbjct: 709 NLSKLPSHL-RLKSLQNLELSRCCKLESFPTIDENMKSLRHLDLDFTAIKELPSSIGYLT 767

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +  L L++ +NL  +P +I  L  L  L +S C R +  P
Sbjct: 768 ELCTLNLTSCTNLISLPNTIYLLRNLDELLLSGCSRFRIFP 808


>gi|356541551|ref|XP_003539238.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 236/774 (30%), Positives = 372/774 (48%), Gaps = 109/774 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL++ L  + I TF+DD+ L RG+ IS+++   IE S  AI+
Sbjct: 17  YDVFLSFRGEDTRFGFTGHLYNTLRHRGINTFMDDEALERGEQISEAIFKAIEESGKAIV 76

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR--LRK 97
           +FS+ YASS W                      FY VDPS VR Q  S+G+  ++  ++ 
Sbjct: 77  VFSKNYASSTWCLEELVKILSCMKTKELKVYPLFYNVDPSEVRYQRASYGQQLAKHEIKM 136

Query: 98  RFP-EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           ++  +K++ W+ AL EAA+L G+   +    E + I  I  DV+          ++ LVG
Sbjct: 137 KYSKQKVQNWRLALHEAANLVGWHFKDGHGYEYEFITRIV-DVVGISKPNLLPVDEYLVG 195

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  I +I   L +    V  + I G+ GI K T+A A++N IS  FEGS F  +VR + 
Sbjct: 196 IESRIPKIIFRLQMTDPTVIMVGICGVSGIGKTTLAQALYNHISPQFEGSCFLNDVRGSS 255

Query: 216 ETGGIKDLQKKLLSELSK-----DGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
              G+  LQ+ +LS+++      D   + I   + +L  K+V ++ D+V           
Sbjct: 256 AKYGLAYLQEGILSDIAGENIKVDNEHKGIPILIRKLHGKRVLLILDNVDKLEQLEYLAG 315

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IIT+R K VL        Y +  L Y +A +L       G   D  +  
Sbjct: 316 ECNWFGLGSRIIITSRCKDVLAAHGVENIYDVPTLGYYEAVQLLSSKVTTGPVPDYYN-A 374

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEV-----WES------AMRKLEIIPHVEIEEV 363
           + ++A+  + G+PL LK +G  L  +   +     W S      A+ + E +   EI+ +
Sbjct: 375 IWERAVHCSHGLPLVLKDIGSDLSEKMNVIGSDLSWPSIDELGIALERYERVCDGEIQSI 434

Query: 364 LKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLF 410
           LK+SYDSL++ +K +FLDIACF  GE    V  I  A              +SL+++D  
Sbjct: 435 LKVSYDSLNECEKKIFLDIACFFIGEPVSYVEEILSAIGFNPQHSINRLIDRSLLSIDSS 494

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN-----------TGTEA 459
            R+ MHD ++DM  +IV++E+  HP KR+RLW  +D+ QVL +N            G++ 
Sbjct: 495 GRLMMHDHIKDMAMKIVQQEAPLHPEKRSRLWCPQDVLQVLNENELVVFNLFLLSKGSDK 554

Query: 460 IEGISL-DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWP 518
           IE + L D+ + N  + ++  AF  M  LR L         +  HL       +R L W 
Sbjct: 555 IEVMMLVDLPRGNDVLKLSDKAFKNMKSLRMLIIKDAIYSGIPQHLSN----SLRVLIWS 610

Query: 519 QCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD 578
             P   L       V +   C         +    +  C  K   T    DC+ L  +PD
Sbjct: 611 GYPSGCL---PPDFVKVPSDCLI-------LNNFKNMECLTKMDFT----DCEFLSEVPD 656

Query: 579 --ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI 635
              + +L  L +     + ++ +S+G L  ++ L     ++L+ IP + + L+ L  L  
Sbjct: 657 ISGIPDLRILYLDNCINLIKIHDSVGFLGNLEELTTIGCTSLKIIPSAFK-LASLRELSF 715

Query: 636 SHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           S C RL   PE+ C +  L   N   T++E+LP  + ++  +  +NL    +LD
Sbjct: 716 SECLRLVRFPEILCEIENLKYLNLWQTAIEELPFSIGNLRGLESLNLMECARLD 769


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 213/647 (32%), Positives = 328/647 (50%), Gaps = 104/647 (16%)

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE------ 172
           F + + R ES+ I+ I   +  +L  T  + +K LVG++  +E +     IG E      
Sbjct: 2   FSTIICRNESESIKIIVEYISYKLSITLPTISKNLVGIDSRLEVLNGY--IGEEVGEAIF 59

Query: 173 -GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSE 230
            G+C     G+GG+ K T+A  V+++I   FEGS F  NVRE   E  G + LQ++LLSE
Sbjct: 60  IGIC-----GMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSE 114

Query: 231 L-----SKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITT 269
           +     S   + R IE    R  RKK+ +V DDV                  GSR+IIT+
Sbjct: 115 ILMERASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESLAAESKWFGPGSRIIITS 174

Query: 270 RDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLA 329
           RDKQVL      + Y  ++L   DA  LF Q AF  D      ++L+ + + YA G+PLA
Sbjct: 175 RDKQVLTRNGVARIYEAEKLNDDDALMLFSQKAFENDQPAEDFLDLSKQVVGYANGLPLA 234

Query: 330 LKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGE 389
           L+V+G +L GRS   W  A+ ++  IP  EI +VL +S+D L + +K +FLDIACFL+G 
Sbjct: 235 LEVIGSFLHGRSIPEWRGAINRMNEIPDHEIIKVLLVSFDGLHELEKKIFLDIACFLKGF 294

Query: 390 HRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPG 436
             D +  I D               +SLI++    ++ MH+LL+ MG+EI+R+ES   PG
Sbjct: 295 KIDRITRILDGRGFHASIGIPVLIERSLISVSR-DQVWMHNLLQKMGKEIIRRESPEEPG 353

Query: 437 KRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK 496
           +R+RLW +KD+   L  N G E IE I LDM  + +E   N  AFSKM +LR L+     
Sbjct: 354 RRSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGI-KEAQWNMEAFSKMSRLRLLKI---- 408

Query: 497 NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ---- 550
           N   +S        ++R LEW   P K+L  ++  ++LV L M  + +EQLW   +    
Sbjct: 409 NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMANSSIEQLWYGCKSAIN 468

Query: 551 ----RLPSSLCTFKTP----------ITFE----------------------IIDCKMLE 574
                L +SL   KTP          +  E                      +++CK + 
Sbjct: 469 LKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIR 528

Query: 575 RLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLT 631
            LP+  E+E+L+  T+ G + + + P+ +G ++ +  L L   S + ++P SI HL  L 
Sbjct: 529 ILPNNLEMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETS-ITKLPSSIHHLIGLG 587

Query: 632 FLFISHCERLQTLP-ELPC--NLGLLSARNCTSLEKLPAGLSSMSSV 675
            L ++ C+ L+++P  + C  +L  L    C+ L+ +P  L  + S+
Sbjct: 588 LLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESL 634



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 152/325 (46%), Gaps = 55/325 (16%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCK--MLERLPDELENLEYLTVKGTTIRE--LPESLGRLS 604
           +++LP+S+   K      +  CK  ++      L +LE L ++   +RE  LPE +G LS
Sbjct: 644 IRQLPASIFLLKNLEVLSMDGCKRIVMLPSLSSLCSLEVLGLRACNLREGALPEDIGHLS 703

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
            ++ L LS N  +  +P++I  LS+L  L +  C  L +LPE+P  +  ++   C SL+K
Sbjct: 704 SLRSLDLSQNKFVS-LPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKK 762

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE--RGIKK-----SMYFP 717
           +P  +   SS        FL L+  EL +      M  ++ E   +G+        +  P
Sbjct: 763 IPDPIKLSSS----KRSEFLCLNCWELYKHNGRESMGSTMLERYLQGLSNPRPGFGIAVP 818

Query: 718 GNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVF------PAFLKYFRHKS 771
           GNEIP WF H+S GSS +++     P+G        F A V F      P+   +F+  +
Sbjct: 819 GNEIPGWFNHRSKGSSISVQV----PSG-----RMGFFACVAFNANDESPSLFCHFK-AN 868

Query: 772 GEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFG--GEYFGPNYDE 829
           G +++      +C ++    EGHL+           SDH++L   SF    E     ++ 
Sbjct: 869 GRENYPS---PMCINF----EGHLF-----------SDHIWLFYLSFDYLKELQEWQHES 910

Query: 830 FSFRIHCSFHFPPYLERGEVKKCGI 854
           FS  I  SFH   Y +  +V  CG+
Sbjct: 911 FS-NIELSFH--SYEQGVKVNNCGV 932


>gi|30696080|ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008725|gb|AED96108.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1175

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 223/721 (30%), Positives = 361/721 (50%), Gaps = 81/721 (11%)

Query: 57  IAIIIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL 95
           I+I++FS++YASS W                      FY VDPS VRKQ+  FG  F   
Sbjct: 2   ISIVVFSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQTREFGEFFKVT 61

Query: 96  RKRFPEKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-L 153
                E +K+ W  AL E A ++G DS     E+ +IE IA DVL +L AT  S   G L
Sbjct: 62  CVGKTEDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIATSSSNCFGDL 121

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+E  ++ ++S+LC+ SE    + I G  GI K TIA  +++K+S  F+   F    R 
Sbjct: 122 VGIEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRT 181

Query: 214 AEETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
            ++  G+K   +++ LSE+   KD  +  +     RL  KKV IV DDV +         
Sbjct: 182 NQDNYGMKLSWEEQFLSEILDQKDLKISQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVG 241

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+TT+D+ +LK+   +  Y +       A ++ C+ AF  +      ++
Sbjct: 242 QTGWFGPGSRIIVTTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQ 301

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKISYDSLDD 373
           L ++  +    +PLAL ++G  L GR KE W   M  L   +   EI + L++SYD L  
Sbjct: 302 LANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHG 361

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD----------ASKSLINLD-LFYRIRMHDLLRDM 422
           + + +FL IAC L     + +IS+            A KSLI++  L   + MH LL+ +
Sbjct: 362 NYQEIFLYIACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKL 421

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GR+IVR ES  +PGKR  L   +DI  V   NTGTE + GISL+  ++N  + ++  +F 
Sbjct: 422 GRKIVRDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQ 481

Query: 483 KMPKLRFLRFY-------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
            M  L+FL+ +       G+    +   L  +P  ++R L W + PL+ +  N  AE LV
Sbjct: 482 GMHNLQFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFPLRCMPSNFKAEYLV 540

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD-----ELENLEYLTV 588
           +L+M  +++E+LW+  Q+L S           ++   + L+ +PD      LE ++  + 
Sbjct: 541 NLEMAYSQLERLWEGTQQLGSL-------KKMDLSKSENLKEIPDLSYAVNLEEMDLCSC 593

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           K  ++  LP S+  L  ++ L +S+ SN+E +P  + +L  L  L +  C +L++ P++ 
Sbjct: 594 K--SLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQIS 650

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYV--NLCNFLKLDPNELSEIVKDGWMKHSLYE 706
            N+ +L+       E+    + +MS + ++  + C    L  N   E +    M HS  E
Sbjct: 651 RNISILNLSGTAIDEESSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLE 710

Query: 707 E 707
           +
Sbjct: 711 K 711



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 170/456 (37%), Gaps = 139/456 (30%)

Query: 509  FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------ 554
             + + HL W  CPLK+L  N   E LVSL M  +K+E+LW+  Q   +            
Sbjct: 674  MSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKL 733

Query: 555  ----SLCTFKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELP-----ESLG 601
                +L       T ++  CK L  +P  +++L  LT     + T +  LP     ESL 
Sbjct: 734  KEFPNLSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPTDVNLESLH 793

Query: 602  RLSW---------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
             L                 ++RL+L +++ +E +P  I    +LT L +  C+RL+ +  
Sbjct: 794  TLDLSGCSKLTTFPKISRNIERLLL-DDTAIEEVPSWIDDFFELTTLSMKGCKRLRNIST 852

Query: 647  LPCNLGLLSARNCTSLEKLPA------------------GLSSMSSVLY---------VN 679
              C L  +   N +  E+L                     L   +S L+         V+
Sbjct: 853  SICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVS 912

Query: 680  LCNFLKLDPNELS--------EIVKDGWMKHSLYEERGIKKSMY----FPGNEIPKWFRH 727
            +C  +   P  LS        +++           E  I +S +     PG ++P  F +
Sbjct: 913  ICAMVFKYPQALSYFFNSPEADLIFANCSSLDRDAETLILESNHGCAVLPGGKVPNCFMN 972

Query: 728  QSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVFPAFLK----------YFRHKSGEDDW 776
            Q+ GSS ++   P   + Y+ + + F  C V+  P  L           YFR K  E   
Sbjct: 973  QACGSSVSI---PLHESYYSEEFLGFKACIVLETPPDLNFKQSWIWVRCYFRDKCVE--- 1026

Query: 777  DGNVYAVCCDWKRKSEGHLY--------SWFLGKISYVESD--------HVFLGCNSFGG 820
                ++V   W      HL            +G  S +++D        H++  CNS   
Sbjct: 1027 ----HSVQFSWDSNKMDHLLMINFRLPTKEIIGCPSQLDTDDLMFFFYHHMYYACNS--- 1079

Query: 821  EYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHF 856
             Y  P+              P  ++R  +K CGI F
Sbjct: 1080 -YVNPS--------------PCSVQR--IKGCGIKF 1098


>gi|227438203|gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 219/683 (32%), Positives = 329/683 (48%), Gaps = 82/683 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRGEDTR    SHL+  L  + I TF DDQ L +GD+IS  L   ++ S  A+
Sbjct: 14  MYDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEKGDHISDQLHIALKGSSFAV 73

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ SE YA+SRW                      FY VDPS VR Q  SF     + R  
Sbjct: 74  VVLSENYATSRWCLMELQLIMEYMKEGTLEVFPVFYGVDPSTVRHQLGSFSLERYKGRPE 133

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              K+ +W+ AL   A+LSG DS     E+ ++ EIA D+ +R+    +  +  +VG++ 
Sbjct: 134 MVHKVHKWREALHLIANLSGLDSRHCVDEAVMVGEIARDISRRVTLMQKIDSGNIVGMKA 193

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EE 216
            +E +  LL + S  V  L IWG+GGI K +IA  +++++S  F    F  N++    E 
Sbjct: 194 HMEGLNHLLDLESNEVVVLGIWGMGGIGKTSIAKCLYDQLSPRFRARCFIENIKSVSKEH 253

Query: 217 TGGIKDLQKKLL-SELSKDGNMRNIESQLN----RLARKKVRIVFDDVT----------- 260
              +K  QK++L S LS D ++ ++E+       RL  +KV +V D V            
Sbjct: 254 DHDLKHFQKEMLCSILSDDISLWSVEAGCQEIKKRLGHQKVFLVLDGVDKVAQVHALAKE 313

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTRD  +L  C     Y +  L   DA K+F Q AF G        +L
Sbjct: 314 KHWFGPGSRIIITTRDMGLLNTCGVENVYEVNCLNDKDALKMFKQIAFEGPPPCDGFEQL 373

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSK--EVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           + +A + + G+P A++    +L GR+   EVWE A+  LE        E+LKISY+ L  
Sbjct: 374 SIRATRLSHGLPSAIQAHALFLRGRTAAPEVWEEALTALESSLDENTMEILKISYEGLPK 433

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
             +NVFL +AC   G+    + S+               A KSLI +     + MH L+ 
Sbjct: 434 PHQNVFLHVACLFNGDTLQRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLVE 493

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDI-YQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            M RE++R ++      R  L   +DI Y +     G E  E +SL    +     M + 
Sbjct: 494 QMAREMIRDDT---SLARKFLRDPQDICYALTNFRDGGEQTECMSLHSCNLACAFSMKAS 550

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVP-----FAEVRHLEWPQCPLKTLNICAEK--L 532
               M  L+FL+ Y   +    S L+ +P        +R   W   PL+TL   A+   L
Sbjct: 551 VVGHMHNLKFLKVYKHVDS-RESKLQLIPDQHLLPPSLRLFHWDAFPLRTLPSDADPYFL 609

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L +  + +E LW       S     ++    ++   K L++LPD   + +LE L ++ 
Sbjct: 610 VELNLRHSDLETLW-------SGTPMMESLKRLDVTGSKHLKQLPDLSGITSLEELALEH 662

Query: 591 TT-IRELPESLGRLSWVKRLILS 612
            T ++ +PES+G+ S +K+L LS
Sbjct: 663 CTRLKGIPESIGKRSSIKKLKLS 685



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 43/73 (58%)

Query: 262  GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
            GSR+I+ T+DK VL+    N  Y +  L Y +A +LF ++AF   +       L+ +A++
Sbjct: 1120 GSRIILITQDKSVLEESEVNHVYEVGSLRYDEALQLFSRFAFRQPYPPPEFERLSVRAVQ 1179

Query: 322  YAQGVPLALKVLG 334
             A  +P+A+++ G
Sbjct: 1180 LAGFLPMAIRLFG 1192



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 32/148 (21%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-------TTIRELPES 599
           +D + LP ++ +     T  + +C  L+ LP +L  ++ LT+           + E  E 
Sbjct: 836 NDFESLPEAMVSLTRLKTLWLRNCFKLKELP-KLTQVQTLTLTNCRNLRSLVKLSETSEE 894

Query: 600 LGRLSWVKRLILSNNSNLE-----------------------RIPESIRHLSKLTFLFIS 636
            GR   ++ L L N +N+E                        +P SIR L+ L  L ++
Sbjct: 895 QGRYCLLE-LCLENCNNVEFLSDQLIYFIKLTNLDLSGHEFVALPSSIRDLTSLVTLCLN 953

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEK 664
           +C+ L+++ +LP +L  L A  C SLE+
Sbjct: 954 NCKNLRSVEKLPLSLQFLDAHGCDSLEE 981


>gi|357474625|ref|XP_003607597.1| NBS resistance protein [Medicago truncatula]
 gi|355508652|gb|AES89794.1| NBS resistance protein [Medicago truncatula]
          Length = 1278

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 214/714 (29%), Positives = 360/714 (50%), Gaps = 92/714 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR NF  HL   L  K I  F DD  L +G++I   L+  IE S + I 
Sbjct: 22  YDVFVTFRGEDTRFNFIDHLFAALQRKGIFAFRDDTNLQKGESIPPELIRAIEGSQVFIA 81

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS W                      FY VDPS VR Q   +G  FS+  + F
Sbjct: 82  VLSKNYASSTWCLRELVHILDCSQVSGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTF 141

Query: 100 PEK---MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             +   ++ W+ ALT+  ++SG+D    +P+   I++I  ++L  L   F S  K LVG+
Sbjct: 142 QHESHVVQSWREALTQVGNISGWDLRD-KPQYAEIKKIVEEILNILGHNFSSLPKELVGM 200

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              IE++ +LL + S + V  + I G+GGI K T+  A++ +IS  F+   F  ++ +  
Sbjct: 201 NPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLTTALYGQISHQFDARCFIDDLSKIY 260

Query: 216 ETGGIKDLQKKLLSE----------------------------LSKDGNMRNIESQLNRL 247
              G    QK++L +                            L    N+  +E QL++L
Sbjct: 261 RHDGQVGAQKQILHQTFGKEHFQICNLFDTDDLIRRRLRRLRALIILDNVDKVE-QLDKL 319

Query: 248 ARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
           A  +     + + +GSR+II +RD+ +L     ++ Y++  L   ++ +LFCQ AF  +H
Sbjct: 320 ALNR-----EYLGAGSRIIIISRDEHILNEYGVDEVYKVPLLNETNSLQLFCQKAFKLEH 374

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
           + + + ++    + YA G+PLA+KVLG +L GR    W S + +L   P  +I +VL++S
Sbjct: 375 VMSGYDKMALDTLSYANGLPLAIKVLGSFLFGRDISEWRSKLARLRECPIKDIMDVLRLS 434

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           ++ L++ +K++FLDIACF +G +++ V +I +               KSLI++     I 
Sbjct: 435 FEGLENMEKDIFLDIACFFKGYNKECVTNILNCRGFHADIGLRILIDKSLISISYGTNIT 494

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH LL ++GR+IV++ S     K +RLW  +    V+ +N   + +E + +   +  +  
Sbjct: 495 MHSLLVELGRKIVQENSTKDLRKWSRLWSLEHFNNVMLENM-EKNVEAVVICHPRQIKT- 552

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
            + +   S M  LR L F  D+   +   L  +   E+R+ +W   P   L  +    +L
Sbjct: 553 -LVAETLSSMSHLRLLIF--DRGVYISGSLNYLS-NELRYFKWTCYPFMCLPKSFQPNQL 608

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L +  + ++QLW+  + LP+         T +++  K L ++P+  E+ NLE L + G
Sbjct: 609 VELYLWRSSIQQLWEGKKYLPNLK-------TMDLMYSKHLIKMPNFGEVPNLERLNLDG 661

Query: 591 -TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
              + ++  S+G L  +  L L N  NL  IP +I  L+ L +L +S C ++ T
Sbjct: 662 CVNLVQIDPSIGLLRKLVFLNLKNCKNLISIPNNIFGLTSLKYLNLSWCSKVFT 715



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 119/300 (39%), Gaps = 59/300 (19%)

Query: 586  LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            L +    + ++P+++G + W+ RLIL  N N   +P S R LS L +L + HC++L+ LP
Sbjct: 764  LDISFCGLSQMPDAIGCIPWLGRLILMGN-NFVTLP-SFRELSNLVYLDLQHCKQLKFLP 821

Query: 646  ELPCNLGLLSA--------------RNCTSL-EKLPAGLSSMSSVLYVNLCNFLKLDPNE 690
            ELP      S                NC  L EK        SS+  + L  F++ +   
Sbjct: 822  ELPLPHSSPSVIKWDEYWKKWGLYIFNCPELGEK-----DQYSSMTLLWLIQFVQAN--- 873

Query: 691  LSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLI 750
                      + SL   RG    +  PG+EIP W  +Q +G S  +   P      +  I
Sbjct: 874  ----------QESLACFRG-TIGIVIPGSEIPSWLNNQCVGKSTRIDLSPTLHD--SNFI 920

Query: 751  SFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDH 810
              A C  VVF          + E   D ++   C       E      F G +  +ES+H
Sbjct: 921  GLACC--VVFSVTFDDPTMTTKEFGPDISLVFDC--HTATLEFMCPVIFYGDLITLESNH 976

Query: 811  VFLGCNSFGGEYFGP----NYDEFSFRIHCSFHFPPYLERG-----EVKKCGIHFVYAQD 861
             +L         + P    +Y   +F+          LE G     +VK CG  +V+ QD
Sbjct: 977  TWL--------IYVPRDSLSYQNKAFKDVDHITMTACLEDGNGLHVDVKTCGYRYVFKQD 1028



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNIS 45
            YDVF+SF+G+DTR NF  HL      K I  F DD ++ +G++I+
Sbjct: 1233 YDVFVSFKGKDTRYNFIDHLFASFRRKGIIAFKDDAMLKKGESIA 1277


>gi|336238978|gb|AEI27416.1| TIR_3 [Helianthus annuus]
          Length = 1111

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 240/750 (32%), Positives = 371/750 (49%), Gaps = 102/750 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           ++VFLSFRGEDTR NF  HL+  L  + I T+ DDQ L RG++I  +LL  I+ S IA++
Sbjct: 77  HEVFLSFRGEDTRKNFVDHLYKDLVQQGIHTYKDDQTLPRGESIGPALLKAIQESRIALV 136

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YA S W                      FY VDPS VRKQ   +G+  S+  ++ 
Sbjct: 137 VFSQNYADSSWCLDELAHTMECVDTNGQIVIPIFYHVDPSDVRKQKGKYGKALSKHERKN 196

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
            +K++ W+NAL +A +LSG+  N      E+K I +I   +  RL     + NK L+G+E
Sbjct: 197 KQKVESWRNALEKAGNLSGWVINNTENSHEAKCISDIVGTISSRLSILNTNDNKDLIGME 256

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             + +++ +L IGS GV  + IWG+GG  K T+A A + +IS  FE      N+RE    
Sbjct: 257 TRLRDLKLMLEIGSGGVRMVGIWGVGGGGKTTLASAAYAEISHRFEACCLLQNIREESNK 316

Query: 218 GGIKDLQKKLLSELSKDGNM---RNIESQLN---RLARKKVRIV---------------- 255
            G++ LQ+K+LS   K  ++     IE +     RL  K+V +V                
Sbjct: 317 HGLEKLQEKILSVALKTKDVVVGSEIEGRSTIRRRLCHKRVLVVLDDVDDLEQLEALAGS 376

Query: 256 FDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
            D    GSR+IITTRDK +L +      Y +  L + +A KLF + A+  D        L
Sbjct: 377 HDWFGEGSRIIITTRDKHLLSSTAHTNIYEVSLLSHYEAIKLFHRHAYNKDKPVEDFETL 436

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           +   + YA G+PLA+KVLG +L  + ++ W+S + KL+ IP  ++ E LKISYD L+  Q
Sbjct: 437 SLDVVSYAGGLPLAVKVLGSFLYDKDRDEWKSTLAKLKCIPEEKVMERLKISYDGLEPYQ 496

Query: 376 KNVFLDIACFLEGEHR---DEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           K++FLDIACF+   +    D+ + + DA              KSLI + +     MHDL+
Sbjct: 497 KDLFLDIACFMMSWYSHQFDDAMMVLDACNFHPVIGLKVLEQKSLIKV-VAGEFEMHDLM 555

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++M   IVR E  N+  K +R+W  KD+  +        ++E   L    + R I  +  
Sbjct: 556 QEMAHYIVRGEHPNNLEKHSRIWKWKDLEYLCDMGAAAPSMENEVL--ADLPRYIISHPG 613

Query: 480 AF---SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLK 536
            F   + M KLR++ +         S+     F   +   +P       N    KL  L 
Sbjct: 614 LFDVVANMKKLRWILWDNHPASLFPSN-----FQPTKAFLFPS------NFQPTKLRCLL 662

Query: 537 MPCTKVEQLWDDVQRLPS----SLCTF----KTPITFEIIDCKMLERLPDELENLEYLTV 588
           +  ++ ++LW+  + LP+     L  F    KTP  FE + C  LERL         + V
Sbjct: 663 LKHSQQKKLWEGCKSLPNLKILDLQNFRNLIKTP-DFEGLPC--LERL---------ILV 710

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
              ++ E+  S+G    +  + +   S L+R P  I H+ KL  L +S C+ LQ  P++ 
Sbjct: 711 CCESLEEIHPSIGYHKSLVFVDMRLCSALKRFP-PIIHMKKLETLDLSWCKELQQFPDIQ 769

Query: 649 CNL-GLLSARNC-TSLEKLPAGLSSMSSVL 676
            N+  L++   C T +E +P  +    + L
Sbjct: 770 SNMDSLVTLDLCLTRIEIIPPSVGRFCTNL 799



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
           ++ L LS N N  R+P  +  +  L  L +S C  L  LP+LP ++ +L A  C SLE  
Sbjct: 880 LQVLDLSEN-NFSRLPSDLSQILCLKLLNLSDCINLVELPDLPSSIAILKANGCDSLEIA 938

Query: 666 PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
              LS    +  V+L   +KL+   L  ++++    H
Sbjct: 939 RGDLSYCKWLWKVSLLGVVKLNKRVLHSMLEEMSTDH 975


>gi|110741877|dbj|BAE98880.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 1168

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 239/740 (32%), Positives = 359/740 (48%), Gaps = 81/740 (10%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSF G+D R  F SH    L  K I  F D+++ R  ++   L   I+ S IA++
Sbjct: 11  VYDVFLSFSGKDVRVTFRSHFLKELDRKLISAFRDNEIERSHSLWPDLEQAIKDSRIAVV 70

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           +FS+ YASS W                   FY VDPS VR Q   FG  F +  KR  E+
Sbjct: 71  VFSKNYASSSWCLNELLEIVNCNDKIIIPVFYGVDPSQVRYQIGEFGSIFEKTCKRQTEE 130

Query: 103 MK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVECSI 160
           +K +WK ALT+ A++ GFDS     E+K+IEEIANDVL +L  T  + + +  +G+E  I
Sbjct: 131 VKNQWKKALTDVANMLGFDSAKWDDEAKMIEEIANDVLAKLLLTSSTDSAENSIGIEDHI 190

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVREAE 215
             +  LL + +E V  + IWG  GI K TIA A+FN++SRHF  S      F    RE  
Sbjct: 191 ANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETY 250

Query: 216 ETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
           +     D      LQ   LSE+   KD  + ++ +   RL  +K  I+ DD+        
Sbjct: 251 KGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDS 310

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+I+ T +KQ L+    +  Y +       A ++FCQ AFG +     
Sbjct: 311 LVGKTNWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEG 370

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
             EL  +    A  +PL L V G  L GR KE W   + +L+      IEE LK+SYD++
Sbjct: 371 FEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAI 430

Query: 372 DDSQ-KNVFLDIACF--------LEGEHRDEVISIFDASKSLINLDLFY----RIRMHDL 418
            + + + +F  IAC         +E    D  + +  A ++L++  L +     + MH L
Sbjct: 431 GNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRL 490

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L++ GR IVR +S ++PG+R  L    D   VL +  GT  + GISLD +KV+ E  ++ 
Sbjct: 491 LQETGRNIVRSQSTDNPGERVFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVS-EFCVHE 549

Query: 479 YAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC-AEKL 532
            AF  M  L FL      F  ++ K  +         + + L W + PLK +       L
Sbjct: 550 NAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTFLRNL 609

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L+M  +K+E+LW+          +F      ++   K L+ +PD  +  N+E L    
Sbjct: 610 VKLEMHDSKLEKLWEGAM-------SFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGH 662

Query: 591 T-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC 649
             ++ ELP S+  L+ +  L +     LE +P    +L  L +L  + C +L+T PE   
Sbjct: 663 CWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYLNFNECWKLRTFPEFAT 721

Query: 650 NLGLLSARNCTSLEKLPAGL 669
           N+  L     TS+E+ P+ L
Sbjct: 722 NISNLILAE-TSIEEYPSNL 740



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            +++ LP+ +   ++ ++  +  C  L+R PD   N++YL +  T I E+P  +     + 
Sbjct: 808  NLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLT 866

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ--TLPELPCNLGLLSARNCTSLEKL 665
            +L +     L+ +  +I  L  L  +  S+C  L    L   P  + ++ A N   + + 
Sbjct: 867  KLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRVDLSCYPSGVEMMKADNADIVSEE 926

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
                   S VL VN  + + LD   +            L+++  I  SM  PG E+P +F
Sbjct: 927  TTSSLPDSCVLNVNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYF 974

Query: 726  RH-----QSMGSSATLKTRPPRPAGYNK-LISFAFCAVV 758
             +     Q  G+S++L   P  P   ++    F  CAVV
Sbjct: 975  TYRTSDSQPFGTSSSLPI-PLLPTQLSQPFFRFRVCAVV 1012


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 223/681 (32%), Positives = 345/681 (50%), Gaps = 101/681 (14%)

Query: 127 ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS 186
           ES+ I+ IA+ +  +L  T  + +K LVG++  +E +   +   +     + I G+GGI 
Sbjct: 2   ESESIKAIADCISYKLSLTLPTISKELVGIDSRLEVLNGYIGEETGEAIFIGICGMGGIG 61

Query: 187 KITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSE--LSKDGNM----RN 239
           K T+A  ++++I R FEGS F  NVREA  E  G + LQKKLLS+  + +D N+      
Sbjct: 62  KTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDINICDSSTG 121

Query: 240 IESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKK 283
           IE    +L R K+ +V DDV                  GSR+IIT+RD  VL      K 
Sbjct: 122 IEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVLIGNDDTKI 181

Query: 284 YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
           Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLA +V+G +L  RS  
Sbjct: 182 YEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLAHEVIGSFLYERSIP 241

Query: 344 VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--- 400
            W  A+ ++  IP  +I +VL++S+D L +S K +FLDIACFL+G  +D +  I ++   
Sbjct: 242 EWRGAINRMNEIPDGKIIDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRITRILESRGF 301

Query: 401 ----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                      +SLI++    ++ MHDLL+ MG+EIVR ES   PG+R+RLW ++D+   
Sbjct: 302 HAGIGIPVLIERSLISVSR-DQVWMHDLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLA 360

Query: 451 LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA 510
           L  NTG E IE I LDM  + ++   N  AFSKM KLR L+     N   +S        
Sbjct: 361 LMDNTGKEKIEAIFLDMPGI-KDAQWNMEAFSKMSKLRLLKI----NNVQLSEGPEDLSN 415

Query: 511 EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEII 568
           ++R LEW   P K+L   +  ++LV L M  + ++QLW             K+ +  +II
Sbjct: 416 KLRFLEWYSYPSKSLPAGLQVDELVELHMANSNLDQLW----------YGCKSALNLKII 465

Query: 569 DCKM---LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE 622
           +      L R PD   + NLE L ++G T++ E+  SLG    ++ + L N  ++  +P 
Sbjct: 466 NLSYSLNLSRTPDLTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPS 525

Query: 623 SIRHLSKLTFLFISHCERLQTLPELPCN--------------------------LGLLSA 656
           ++  +  L    +  C +L+  P++  N                          LGLLS 
Sbjct: 526 NL-EMESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSM 584

Query: 657 RNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-- 712
            +C +L+ +P+ +S + S+  ++L  C+ LK  P  L ++        SL E  G+    
Sbjct: 585 NSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKV-------ESLEEFDGLSNPR 637

Query: 713 ---SMYFPGNEIPKWFRHQSM 730
               +  PGNEIP WF H+ +
Sbjct: 638 PGFGIVVPGNEIPGWFNHRKL 658


>gi|298378158|gb|ADI80539.1| recognition of Peronospora parasitica 1 [Arabidopsis thaliana]
          Length = 1154

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 242/802 (30%), Positives = 370/802 (46%), Gaps = 118/802 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 91  HDVFPSFHGADVRRTFLSHILESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 150

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY VDP+ ++KQ+  FG+ F++  R + 
Sbjct: 151 LSRKYASSSWCLDELAEIMICREVLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGKP 210

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+++RW+ AL + A ++G+ S+    E+++IE+I+ DV   LD +  SK+    VG+  
Sbjct: 211 KEQVERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSNMLDLSIPSKDFDDFVGMAA 270

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            +E  E LL +  + V  + IWG  GI K TIA  +F++ S  F  +    ++RE     
Sbjct: 271 HMEMTEQLLRLDLDEVRMIGIWGPPGIGKTTIAACMFDRFSSRFPFAAIMTDIRECYPRL 330

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDV----------- 259
              E      LQ+++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 331 CLNERNAQLKLQEQMLSQIFNQKDTMISHLGVAPERLKDKKVFLVLDEVGHLGQLDALAK 390

Query: 260 -----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++K     +A ++FC  AFG          
Sbjct: 391 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKSPSNDEAFQIFCMNAFGQKQPCEGFWN 450

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +    A  +PL LKVLG  L G SK  WE  + +L+      I  +++ S+D+L D 
Sbjct: 451 LAWEVTCLAGKLPLGLKVLGSALRGMSKPEWERTLPRLKTSLDGNIGSIIQFSFDALCDE 510

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRD 421
            K +FL IAC    E   +V  +               A KSLI+ +    I+MH LL  
Sbjct: 511 DKYLFLYIACLFNNESTTKVEEVLANKFLDVGQGIHVLAQKSLISFE-GEEIQMHTLLVQ 569

Query: 422 MGREIVRKESINHPGKRNRLW-HHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSY 479
            GRE  RK+ ++H   +++L    +DI +VL  +T  +    GI+LD++K     +++  
Sbjct: 570 FGRETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRCFIGINLDLSKNEERWNISEK 629

Query: 480 AFSKMPKLRFLR---FYGDKNKCMVSHLEGVPFAEVRHLEWPQ----CPLKTLNICAEKL 532
           A  +M   +F+R   FY  K   +          ++R L+W      C   T N   E L
Sbjct: 630 ALERMHDFQFVRIGAFYQRKRLSLALQDLIYHSPKLRSLKWYGYQNICLPSTFN--PEFL 687

Query: 533 VSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFE---IIDCKMLERL 576
           V L M  +K+  LW+  ++L +              L    T    E   + +C  L  L
Sbjct: 688 VELDMSFSKLWNLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELRLSNCSSLVEL 747

Query: 577 PD----------ELENLEYLTV-----KGTTIR-----------ELPESLGRLSWVKRLI 610
           P           +LEN   L         T +R           ELP S+G  + +K+L 
Sbjct: 748 PSFGNATKLEKLDLENCRSLVKLPAIENATKLRKLKLEDCSSLIELPLSIGTATNLKKLD 807

Query: 611 LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN---LGLLSARNCTSLEKLPA 667
           ++  S+L R+P SI  ++ L    +S+C  L  LP    N   L LL  R C+ LE LP 
Sbjct: 808 MNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRKLALLLMRGCSKLETLPT 867

Query: 668 GLSSMS-SVLYVNLCNFLKLDP 688
            ++ +S  +L +  C+ LK  P
Sbjct: 868 NINLISLRILDLTDCSRLKSFP 889



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 49/237 (20%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSW--- 605
            ++ LP+++      I  ++ DC  L+  P+   +++ L + GT I+E+P S+  +SW   
Sbjct: 862  LETLPTNINLISLRI-LDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVPLSI--MSWSPL 918

Query: 606  --------------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                                + +L LS +  ++ +P  ++ +S+L  L +++C  L +LP
Sbjct: 919  ADFQISYFESLKEFPHAFDIITKLQLSKD--IQEVPPWVKRMSRLRDLRLNNCNNLVSLP 976

Query: 646  ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLY 705
            +LP +L  L A NC SLE+L    ++    LY   C        +L++  +D  M  S  
Sbjct: 977  QLPDSLAYLYADNCKSLERLDCCFNNPEISLYFPNC-------FKLNQEARDLIMHTS-- 1027

Query: 706  EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTR---PPRPAGYNKLISFAFCAVVV 759
                 +     PG ++P  F H++  S  TLK +    P P      + F  C ++V
Sbjct: 1028 ----TRNFAMLPGTQVPACFNHRAT-SGDTLKIKLKESPLPTT----LRFKACIMLV 1075


>gi|15237452|ref|NP_199463.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177588|dbj|BAB10819.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008010|gb|AED95393.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1353

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 238/743 (32%), Positives = 359/743 (48%), Gaps = 85/743 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVF SF G D R NF SHL   L  KS+ +F D  + R  ++   L   I  S IA++
Sbjct: 8   VYDVFPSFSGTDVRRNFLSHLLKGLH-KSVNSFRDQNMERSQSLDPMLKQAIRDSRIALV 66

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS W                      FY +DPSHVR Q   FG++F     R 
Sbjct: 67  VFSKNYASSSWCLNELLEIVKCKEEFGQMVIPIFYCLDPSHVRHQDGDFGKNFEETCGRN 126

Query: 100 PEKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVE 157
            E+ K +W+ ALT+ A+L+GFDS     E+K+IEEIANDV  +L +T  + + +  +G+E
Sbjct: 127 TEEEKIQWEKALTDVANLAGFDSVTWDDEAKMIEEIANDVSGKLLSTSSTDSAENSIGIE 186

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS-----YFALNVR 212
             I  +  LL + +E V  + IWG  GI K TIA A+FN++SRHF  S      F    R
Sbjct: 187 DHIANMSVLLQLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSR 246

Query: 213 EAEETGGIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--- 261
           E  +     D      LQ   LSE+   KD  + ++ +   RL  +K  I+ DD+     
Sbjct: 247 ETYKGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLKHQKTLIIIDDLDDLVV 306

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+I+ T +KQ L+    +  Y +       A ++FCQ AFG +  
Sbjct: 307 LDSLVGKTNWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSP 366

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
                EL  +    A  +PL L V G  L GR KE W   + +L+      IEE LK+SY
Sbjct: 367 PEGFEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSY 426

Query: 369 DSLDDSQ-KNVFLDIACF--------LEGEHRDEVISIFDASKSLINLDLFY----RIRM 415
           D++ + + + +F  IAC         +E    D  + +  A ++L++  L +     + M
Sbjct: 427 DAIGNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEM 486

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LL++ GR IVR +S ++PG+R  L    D   VL +  GT  + GISLD +KV+ E  
Sbjct: 487 HRLLQETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVS-EFC 545

Query: 476 MNSYAFSKMPKLRFL-----RFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC-A 529
           ++  AF  M  L FL      F  ++ K  +         + + L W + PLK +     
Sbjct: 546 VHENAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTFL 605

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
             LV L+M  +K+E+LW+          +F      ++   K L+ +PD  +  N+E L 
Sbjct: 606 RNLVKLEMHDSKLEKLWEGAM-------SFTCLKELDMWASKYLKEIPDLSKATNIEKLD 658

Query: 588 VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
                ++ ELP S+  L+ +  L +     LE +P    +L  L +L  + C +L+T PE
Sbjct: 659 FGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYLNFNECWKLRTFPE 717

Query: 647 LPCNLGLLSARNCTSLEKLPAGL 669
              N+  L     TS+E+ P+ L
Sbjct: 718 FATNISNLILAE-TSIEEYPSNL 739



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
            +++ LP+ +   ++ ++  +  C  L+R PD   N++YL +  T I E+P  +     + 
Sbjct: 807  NLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLT 865

Query: 608  RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ--TLPELPCNLGLLSARNCTSLEKL 665
            +L +     L+ +  +I  L  L  +  S+C  L    L   P  + ++ A N   + + 
Sbjct: 866  KLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRVDLSCYPSGVEMMKADNADIVSEE 925

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWF 725
                   S VL VN  + + LD   +            L+++  I  SM  PG E+P +F
Sbjct: 926  TTSSLPDSCVLNVNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYF 973

Query: 726  RH-----QSMGSSATLKTRPPRPAGYNK-LISFAFCAVV 758
             +     Q  G+S++L   P  P   ++    F  CAVV
Sbjct: 974  TYRTSDSQPFGTSSSLPI-PLLPTQLSQPFFRFRVCAVV 1011


>gi|297740948|emb|CBI31260.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 236/744 (31%), Positives = 357/744 (47%), Gaps = 119/744 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQL-IRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDT   FT HL+  L       F DD+   + + I+   L  IE S I+I+
Sbjct: 14  YDVFLSFRGEDTGKTFTDHLYTALDENGFYAFRDDEKHEKREEIAPEFLTAIEESKISIL 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR--K 97
           +FS+ YASSRW                      FY VDPS VR Q  S     S  R  +
Sbjct: 74  VFSKNYASSRWCLDELETIIKSMKKPGRMVMPVFYHVDPSEVRDQIGSCEVFLSHERDAE 133

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+ RW+ AL EA++L G+  +  R ES+LI+EI  D+L+RL+      +   VG+E
Sbjct: 134 ETKEKVNRWRAALREASNLVGWRLHNHRYESQLIKEIITDILRRLNCELLQVDYDTVGME 193

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
             ++++ SL+ +  + V  + I GI GI K TIA A++NKIS HF+ + F  NV E    
Sbjct: 194 FRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKISYHFQSTIFLTNVGENSRG 253

Query: 218 GGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDV----------------TS 261
             +   Q     +L  D ++        R   K+V +V DDV                + 
Sbjct: 254 HHLNLPQ---FQQLLDDASI----GTYGRTKNKRVLLVVDDVDRLSQVEYLVKLRDSFSL 306

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
            SR+I TTRD+ +L     +  Y  K L + +A  LF   AF        ++ L +  + 
Sbjct: 307 RSRIIFTTRDRHLLNVAKLDASYESKGLTHEEAIHLFSWHAFKQTFPKEDYVGLVNHVVG 366

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           Y +G PLALKVLG  L G++   W+  + KL    H EI   LK+S+D L  +++ +FL 
Sbjct: 367 YVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEIYNELKVSFDGLTPTEQEIFLK 426

Query: 382 IACFLEGEHRDEVISIFDA----SKSLINL--DLFY------RIRMHDLLRDMGREIVRK 429
           + C L+G+  + V +I D+    S+S I +  D+        ++ MHDLL+ MG++++ +
Sbjct: 427 VVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATISNNKLYMHDLLQQMGQKLIDE 486

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF 489
            + + P KR+RL   KD+Y  L +NTGTE I+           +I  +S  F KMPKL  
Sbjct: 487 NNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQ-----------KIQFSSAGFLKMPKLYS 535

Query: 490 L----------RFYGDK------NKCMVSHL---------EGVPFAEVRHLEWP-QCPLK 523
           L           F GD       ++  +  L                ++ L  P   PLK
Sbjct: 536 LMHLPLKSLPPNFPGDSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMHLPLK 595

Query: 524 TL--NICAEKLVSLKMPCTKVEQLWD------DVQRLPSSLCT-------FKTPITFEII 568
           +L  N   + L+ L +  + + QLW       +++ +  S C        F +    +I+
Sbjct: 596 SLPPNFPGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMPALKIL 655

Query: 569 ---DCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIP 621
               CK L  LP    EL+ LE L   G + +   PE   ++  +K L L + + ++ +P
Sbjct: 656 RLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHL-DETAIKELP 714

Query: 622 ESIRHLSKLTFLFISHCERLQTLP 645
            SI HL+ L FL + HC+ L +LP
Sbjct: 715 SSIYHLTALEFLNLEHCKNLVSLP 738


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 244/751 (32%), Positives = 379/751 (50%), Gaps = 90/751 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NFT HL+  L    I+TF DD+ L +G +I+  L   IE S I  +
Sbjct: 18  YDVFLSFRGEDTRKNFTDHLYKNLDAYGIRTFRDDEELEKGGDIAFDLSRAIEESKIFTV 77

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA+SRW                      FY V+PS VRKQ  S+G  F+   K  
Sbjct: 78  IFSKNYANSRWCLNELLKIIESMEKEGKIVLPIFYHVNPSDVRKQLGSYGEAFANHEKDA 137

Query: 100 PEKMK----RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN--KGL 153
            E+ K    +W+ AL++A++LSG+  +  + E+ +++EI  D+++RL+   Q  N  K +
Sbjct: 138 DEEKKASIQKWRTALSKASNLSGWHIDE-QYETNVLKEITGDIIRRLNHD-QPLNVGKNI 195

Query: 154 VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           VG+   +E+++SL+      VC + I GIGGI K T+A A++N++S  ++GS F   V+E
Sbjct: 196 VGMSFHLEKLKSLMKKKFNEVCVVGICGIGGIGKTTVAMAIYNELSNQYDGSSFLRKVKE 255

Query: 214 AEETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDVT------- 260
             E   ++ LQ +LL ++   K   + NI+  +  + R    K+V +VFDDV        
Sbjct: 256 RSERDTLQ-LQHELLQDILRGKSLKLSNIDEGVKMIKRSLSSKRVLVVFDDVDNLKQLEY 314

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                    + S +IITTRDK +L     N +Y +  L   +A +LF  WAF  +  +  
Sbjct: 315 LAEEQGWFGAKSTIIITTRDKNLLAQYGVNIEYEVTTLNEEEAXELFSLWAFRQNLPNKV 374

Query: 312 HIELTDKAIKYAQGVPLALKVLGC-YLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +L  + ++YA+G+PLALKVLG  +   ++KE W+SA+ KL+      I  VL+ SYD 
Sbjct: 375 DQDLFYEVVRYAKGLPLALKVLGSNFFDKKTKEEWKSALEKLKKSSDERIYSVLRTSYDG 434

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLR 420
           LD   K++FLDIACF +G+ +D V  I              K LI +     + MHD+++
Sbjct: 435 LDSVDKDIFLDIACFFKGKDKDFVSRILGPXAKNGIRTLEDKCLITISX-NMLDMHDMVQ 493

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            MG  IV +E    PG R+RLW   D   VL KN     ++ I+L  + VN    +    
Sbjct: 494 QMGWNIVHQECPKDPGGRSRLW-GSDAEFVLTKNXLLXKLKVINLSYS-VNL---IKIPD 548

Query: 481 FSKMPKLRFLRFYGDKN-KCMVSHLEGVPFAEVRHLEWPQCPLKT----LNICAEKLVSL 535
           FS +P L  L   G +  K + S  +   F  ++ L    C   T    +N    KL   
Sbjct: 549 FSSVPNLEILTLEGCRRLKSLPSSFD--KFKCLQSLSCGGCSKLTSFPEINGNMGKLREF 606

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKML----ERLPDELENLEYLTVKGT 591
               T + +       +P S+          + DCK L    E +              +
Sbjct: 607 NFSGTSINE-------VPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCS 659

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            ++ LP S+  L  +K L LS   NL R+PESI  L  L  LF++ C + +  P +  ++
Sbjct: 660 KLKGLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHM 719

Query: 652 GLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
             L     + T+++++P+ ++ + ++ Y+NL
Sbjct: 720 NNLRVLRLDSTAIKEIPSSITHLKALEYLNL 750



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 101/270 (37%), Gaps = 55/270 (20%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRL 603
           +++ RLP S+C+  +  T  +  C   +  P     + NL  L +  T I+E+P S+  L
Sbjct: 683 ENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHL 742

Query: 604 SWVKRLILSNNS----------------------------------------NLE----- 618
             ++ L LS +S                                        NL+     
Sbjct: 743 KALEYLNLSRSSIDGVVLDICHLLSLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFS 802

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV 678
            IP  I  LS LT L + HC +LQ +PELP +L LL      S     +          V
Sbjct: 803 SIPAGISRLSHLTSLNLRHCNKLQQVPELPSSLRLLDVHG-PSDGTSSSPSLLPPLHSLV 861

Query: 679 NLCNFLKLDPNELSEIVKDGW-MKHSLYEERGIKKSMYFPGNE-IPKWFRHQSMGSSATL 736
           N  N    D    S    +G     S Y   GI   +  PG+  IPKW +++  GS   +
Sbjct: 862 NCLNSAIQDSENRSRRNWNGASFSDSWYSGNGI--CIVIPGSSGIPKWIKNKRKGSEIEI 919

Query: 737 KTRPPRPAGYNKLISFA-FCAVVVFPAFLK 765
              P      N  + FA +C     P+ L+
Sbjct: 920 GL-PQNWHLNNDFLGFALYCVYAPXPSNLE 948


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 205/580 (35%), Positives = 306/580 (52%), Gaps = 81/580 (13%)

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGN----M 237
           +GGI K TIAG +FN+IS  F+   F  +VR+  ET G+  LQ+ L S L +D N    M
Sbjct: 1   MGGIGKTTIAGVIFNRISALFDSCCFLADVRKESETTGLPHLQEALFSMLLEDENLNMHM 60

Query: 238 RNIESQL--NRLARKKVRIVFDDVTS---------------GSRVIITTRDKQVLKNCWA 280
            + E      RL RKKV +V DDV S               GSR+IITTRD+ +L +   
Sbjct: 61  LSTEPSCIKTRLHRKKVLVVLDDVNSSRQLELLAGIHWYGPGSRIIITTRDRHLLVSHAV 120

Query: 281 NKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGR 340
           +  Y +K+L    A +LF ++AF   H  A   EL+ +AI Y +G+PLALKVLG  L GR
Sbjct: 121 DFVYEVKDLNEEHALELFSRYAFKQKHRTAEFTELSIRAIDYCKGLPLALKVLGSSLYGR 180

Query: 341 SKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF-- 398
           S+  W  ++ +LE   + +I++ L+IS+D L +  K++FLDIAC+  G+ +D V  +   
Sbjct: 181 SENQWNDSLNRLEKHFNKDIQQTLRISFDGLAELNKSLFLDIACYFRGQDKDYVAKLLKS 240

Query: 399 ------DASKSLINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIY 448
                      LI+  L       + MHDLL+DMGR+IVR++S+  PGKR+RLW H+D+ 
Sbjct: 241 FGFFPESGISELIDHSLVTVFDNTLGMHDLLQDMGRDIVRQQSLKDPGKRSRLWDHEDVV 300

Query: 449 QVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF---YGDKNKCMVSHLE 505
           QVL + +G+E +E + +D++K + E   +  AF KM  LR L     YGD+   +    E
Sbjct: 301 QVLMEESGSEHVECMVIDLSKTD-EKKFSVEAFMKMKNLRLLDVHGAYGDRKIHLSGDFE 359

Query: 506 GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI 563
            + + +++ L W   PLK L  N   +K++ L+MP + +++LW    RL      F    
Sbjct: 360 FL-YYKLKCLCWEGYPLKYLPSNFNPKKIIMLEMPQSSIKRLWGG--RLELKELQF---- 412

Query: 564 TFEIIDCKMLERLPD--ELENLEYLTVKGTT-------------------------IREL 596
             ++   + L   PD   + NLE L ++G T                         +R L
Sbjct: 413 -IDLSHSQYLTETPDFTGVPNLETLILEGCTSLSKVHPSIGVLKKLILLNLKDCNCLRSL 471

Query: 597 PESLGRLSWVKRLILSNNSNLERIPE---SIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
           P S+G L  +  L+LS  S LE+ PE    + HLSKL     +  E   +   L   L  
Sbjct: 472 PGSIG-LESLNVLVLSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANL-TGLTF 529

Query: 654 LSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
           LS RNC +LEKLP+ ++S+  +  ++L  C+ LK  P+ L
Sbjct: 530 LSLRNCKNLEKLPSNINSLKYLKNLDLFGCSKLKSLPDSL 569



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 38/294 (12%)

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
           + +P     LS ++ L +  N N   IP SI  L +L FL++  C+ L+ L +LP  +  
Sbjct: 654 KMIPADFYTLSSLEVLNIGRN-NFVNIPASISQLPRLRFLYLDDCKNLKALRKLPTTIHE 712

Query: 654 LSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLY------ 705
           +SA NCTSLE L  P  ++   +       N  KL  N+ ++     +++  L       
Sbjct: 713 ISANNCTSLETLSSPEVIADKWNWPIFYFTNCSKLAVNQGNDSTAFKFLRSHLQSLPMSQ 772

Query: 706 ----EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAVVVF 760
                  G +  +  PG E+P WF HQ++GSS  ++     P  YN K    A C     
Sbjct: 773 LQDASYTGCRFDVIVPGTEVPAWFSHQNVGSSLIIQL---TPKWYNEKFKGLAIC----- 824

Query: 761 PAFLKYFRHKSGEDDWDG--NVYAVCCDWK--RKSEGHLYSWFLGKISYVESDHVFLGCN 816
              L +  H++     DG     A+ C  +    +    + + + ++  ++S+H+++G +
Sbjct: 825 ---LSFATHENPHLLPDGLSTDIAIYCKLEAVEYTSTSSFKFLIYRVPSLKSNHLWMGFH 881

Query: 817 SFGGEYFGPNYDEFSFRIHCSF---HFPPYLERGEVKKCGIHFVYAQDSADHIL 867
           S  G  FG +    ++  +C +    F   +   EVK CGI FVY QD  D+ L
Sbjct: 882 SRIG--FGKS----NWLNNCGYLKVSFESSVPCMEVKYCGIRFVYDQDEDDYNL 929


>gi|297836991|ref|XP_002886377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332218|gb|EFH62636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 934

 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 244/861 (28%), Positives = 387/861 (44%), Gaps = 159/861 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL        I  F D  + RG  IS  L   I  S I+I++
Sbjct: 14  YRVFTSFHGPDVRKTFLSHLRKEFICNGITMFDDQGIERGQTISPELTQGIRESRISIVL 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YASS W                      FY V+PS VRKQ+  FG  F+    R  
Sbjct: 74  LSKNYASSSWCLDELLEILKCKEDMGQIVMTVFYGVNPSDVRKQTGEFGMAFNETCARKT 133

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E+ +R W  AL +  +++G        ESK+IE+IA DV  +L+AT     + +VG+E  
Sbjct: 134 EEERRKWSQALNDVGNIAGEHFLNWDNESKMIEKIARDVSNKLNATPARDFEDMVGLEAH 193

Query: 160 IEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
           +++I+SLL CIG                K TIA A+ +++S  F+ + F  N+R +    
Sbjct: 194 LKKIQSLLHCIG----------------KTTIARALHSRLSSSFQLTCFMENLRGSYNGG 237

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----GSRVII 267
            +E G    LQ++LLS++     MR  ++ +   RL  +K      + T+    GSR+I+
Sbjct: 238 LDEYGLKLQLQEQLLSKILNQNGMRIYHLGAVPERLCDQKQLEALANETNWFGPGSRIIV 297

Query: 268 TTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVP 327
           TT D+++L+       Y +      +A K+FC++AF         ++L ++  +    +P
Sbjct: 298 TTEDQEILEQHDIKNTYHVDFPTKEEACKIFCRYAFRRSLAPCGFVQLAERVTELCSNLP 357

Query: 328 LALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE 387
           L L+V+G  L G+ +  WE  + +LE     +I  VL++ YD+L    + +FL IA F  
Sbjct: 358 LGLRVMGSTLRGKKEGDWEGILHRLENSLDQQINGVLRVGYDTLHKDDQYLFLLIAFFFN 417

Query: 388 GEHRDEV-ISIFDAS------------KSLINLDLFYRIRMHDLLRDMGREIVRKESINH 434
            +  D V I + D++            KS+I +     I MH LL+ +GRE V+   + +
Sbjct: 418 YQDGDHVKIMLSDSNLDVSLGLKTLTYKSIIQIANDGNIVMHKLLQQVGREAVQ---LQN 474

Query: 435 PGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG 494
           P  R  L    +I  VL+  +G+ ++ GIS D++ +   +++++ AF KM  LRFL  Y 
Sbjct: 475 PKIRKILIDTDEICDVLENGSGSRSVMGISFDISTIQDGVYISARAFKKMCNLRFLNIYK 534

Query: 495 DK----NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD 548
            +    ++  V    G P   +R L W   P K L      E LV LK+   K+E+LW+ 
Sbjct: 535 TRCDGNDRVHVPEDMGFP-PRLRLLRWDVYPGKCLPRTFSPEYLVELKLQHNKLEKLWEG 593

Query: 549 VQRLPS-------------SLCTFKTPITFE---IIDCKMLERLPDELENLEYLT----- 587
            QRL +              L         E   ++ CK L RLP  + NL  L      
Sbjct: 594 TQRLTNLKKMDLTESRKLKELPDLSNATNLEQLTLVSCKSLVRLPSSIGNLHKLEWLLVG 653

Query: 588 ------------------------------------------VKGTTIRELPESLGRLSW 605
                                                     +  T + E PES+   S 
Sbjct: 654 LCRNLQIVPSHFNLASLERVEMYGCWKLRKLVDISTNITTLFITETMLEEFPESIRLWSR 713

Query: 606 VKRLIL--------SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR 657
           ++ L +         + + +++IP+ I++L  L  L+I  C +L +LPELP +L +L A 
Sbjct: 714 LQTLRIQGSLEGSHQSGAGIKKIPDCIKYLHGLKELYIVGCPKLVSLPELPSSLTILQAS 773

Query: 658 NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP 717
           NC SLE +     S+   L+   C   KL     + I +   +                P
Sbjct: 774 NCESLETVSLPFDSLFEYLHFPEC--FKLGQEARTVITQQSLLA-------------CLP 818

Query: 718 GNEIPKWFRHQSMGSSATLKT 738
           G+ IP  F H+++G+S T+++
Sbjct: 819 GSIIPAEFDHRAIGNSLTIRS 839


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 262/908 (28%), Positives = 406/908 (44%), Gaps = 215/908 (23%)

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           GL+G++  + ++ESLL + S  V  + IWG+GGI K TIA AV NK+   FEG +FA N 
Sbjct: 9   GLLGIDVRVSKVESLLNMESPDVLIVGIWGMGGIGKSTIAEAVCNKVRSRFEGIFFA-NC 67

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMRNIESQL-NRLARKKVRIVFDDVTS--------- 261
           R+  +       +      L+  G++   +S + +RL R KV IV DDV +         
Sbjct: 68  RQQSDLRRRFLKRLLGQETLNTMGSLSFRDSFVRDRLRRIKVFIVLDDVDNSMALEEWRD 127

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG--DHL 308
                      GS+V+IT+RDKQVL N   ++ Y+++ L Y DA +LF   A       +
Sbjct: 128 LLDGRNSSFGPGSKVLITSRDKQVLSNI-VDETYKVEGLNYEDAIQLFNSKALKICIPTI 186

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D  H  L ++   + +G PLALKVLG  L G+S E W SA++KL   P  +IE  L+ISY
Sbjct: 187 DQRH--LIEQIAWHVRGNPLALKVLGSSLYGKSIEEWRSALKKLAQDP--QIERALRISY 242

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA---------SKSLIN---LDLFYR-IRM 415
           D LD  QK++FLDIA F      +E   I D            +LI+   +  FY  IRM
Sbjct: 243 DGLDSEQKSIFLDIAHFFNRMKPNEATRILDCLYGRSVIFDISTLIDKCLITTFYNNIRM 302

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HDLL++M   IVR ES + PG+R+RL H  D+ QVL++N GT+ I+GISL    ++R+IH
Sbjct: 303 HDLLQEMAFNIVRAES-DFPGERSRLCHPPDVVQVLEENKGTQKIKGISLSTFMLSRQIH 361

Query: 476 MNSYAFSKMPKLRFLRF------YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NI 527
           + S AF+ M  LRFL F        DK     + LE +P  ++R+L+W   P K+L  + 
Sbjct: 362 LKSDAFAMMDGLRFLNFRQHTLSMEDKMHLPPTGLEYLP-NKLRYLKWCGFPSKSLPPSF 420

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQ-----------------RLP----------------S 554
             E+LV L +   K+ +LW  VQ                  LP                S
Sbjct: 421 RTERLVELHLCNNKLVKLWTGVQDVGNLRTIDLSDSPYLTELPDLSMAKNLQCLRLAKCS 480

Query: 555 SLCTFKTPI------------------TFEIIDCKMLERL-----------PDELENLEY 585
           SL    + +                  +F ++D K+L +L           P   +N+ +
Sbjct: 481 SLTEVPSSLQYLDKLEEIDLFSCYNLRSFPMLDSKVLRKLVISRCLDVTKCPTISQNMVW 540

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSN--------------------NSNLERIPESIR 625
           L ++ T+I+E+P+S+   S ++RL L+                      + ++ +P SI+
Sbjct: 541 LQLEQTSIKEVPQSVT--SKLERLCLNGCPEITKFPEISGDIERLELKGTTIKEVPSSIQ 598

Query: 626 HLSKLTFLFISHCERLQTLP---------------------------------------- 645
            L++L  L +S C +L++ P                                        
Sbjct: 599 FLTRLRDLDMSGCSKLESFPEITGPMKSLVELNLSKTGIKKIPSSSFKHMISLRRLKLDG 658

Query: 646 -------ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG 698
                  ELP +L +L+  +C SLE + + +   S    ++  N  KLD   L   +   
Sbjct: 659 TPIKELPELPPSLWILTTHDCASLETVISIIKIRSLWDVLDFTNCFKLDQKPLVAAMHLK 718

Query: 699 WMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
                     GIK  M  PG+EIP+WF  + +GSS T++     P+  ++L   AFC V 
Sbjct: 719 IQSGDKIPHGGIK--MVLPGSEIPEWFGEKGIGSSLTMQL----PSNCHQLKGIAFCLVF 772

Query: 759 VFPA------------------FLKYFRHKSGEDDWDGNVY-------AVCCDWKRKSEG 793
           + P                   F  + + K+GE D D  V        A+ C+ K     
Sbjct: 773 LLPLPSHDMPYKVDDLFPVEFRFDYHVKSKNGEHDGDDEVVLVSMEKCALTCNMKTCDSD 832

Query: 794 HLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCG 853
           H+   +  +   V     + G N    +++    D  + R+      P      E+K CG
Sbjct: 833 HMVLHYELENILVYFLRKYSG-NEVTFKFYHQEVDNMARRVGHEIQRPIQRPNFELKSCG 891

Query: 854 IHFVYAQD 861
           ++  + ++
Sbjct: 892 VYLHFDEN 899


>gi|297842027|ref|XP_002888895.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334736|gb|EFH65154.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 217/675 (32%), Positives = 334/675 (49%), Gaps = 77/675 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR    S L+  L  + I T+ DDQ I  G  I + L+  I+ S +A++
Sbjct: 14  YDVFLSFRGKDTRRTVVSFLYKDLIRQGILTYKDDQGIGAGSEIKERLIEAIKTSQVAVV 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
             SE YA+S+W                      FYRVDPS VR Q   F   F +   R 
Sbjct: 74  FISENYATSQWCLEELRLIMELHSVNRIHVVPIFYRVDPSDVRHQKGRFAAAFQKHEDRE 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEE----IANDVLKRLDATFQSKNKGLVG 155
           P +  +W+ AL + + +SG  S     +S +I+E    I+  +L R+++T  +    LVG
Sbjct: 134 PNRASQWRRALNQISHISGIHSTEWDDDSAMIDEVVVSISRHLLLRMESTVLN---SLVG 190

Query: 156 VECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  + ++  +  +GSE  V  + IWG+GGI K TIA  ++++ S  F   YF  +++  
Sbjct: 191 MEAHMVKMNLIFNMGSENQVLFIGIWGMGGIGKTTIANCLYDRFSSQFSARYFIEDIKNI 250

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQ----LNRLARKKVRIVFDDVTS------- 261
            +      LQ++ LS +    D   R+ E++    + RL  +K+ IV D V         
Sbjct: 251 CKDKSPAYLQERFLSRICGGLDIGFRSHEARSQEIIARLGHQKILIVLDGVDKAEQVDAL 310

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRD+ +L +C  N  Y +K L   DA ++F   A  G    +  
Sbjct: 311 AKDTSWFGPGSRIIITTRDRGLLNSCGVNNVYEVKCLDDKDALQVFKISALRGSPPPSDG 370

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSK-EVWESAMRKLEIIPHVEIEEVLKISYDS 370
            E L  +A + A G+P AL     YL   +  + WE  +  LE  PH  ++E+L+ SYD 
Sbjct: 371 FEQLFIRASRLAHGLPSALVTYATYLRQNTTIKKWEEELGLLETSPHKNVKEILRNSYDD 430

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRD 421
           LD+  K  FL +AC L G   + V S+ D          +K+LI++ +   I MH L+  
Sbjct: 431 LDEQDKTAFLYVACLLNGYPFNHVTSLLDDGRPRMNHLTAKALISISMDGCINMHFLVVQ 490

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
            G+ IVR+ES N P ++  LW HK+IY VL  N GT+ IEG++L M ++  ++ M+   F
Sbjct: 491 TGKAIVRQESRNRPSRQRFLWDHKEIYDVLDNNIGTDEIEGVTLHMCEMPDKLPMSITVF 550

Query: 482 SKMPKLRFLRFY---GDKNKCMVSHLEGVPFA-EVRHLEWPQCPLKTLNICAEKLVSLKM 537
           + M  ++FL+F+   GD    +    +G  F   +R L W   P+KTL        +L  
Sbjct: 551 NIMHSIKFLKFFKHLGDAESNVQLSEDGFYFPRNIRLLHWDDYPMKTLPSTRSDTTTLS- 609

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IR 594
                  + +      S +  +K     ++   K L  LPD     N E L ++G   +R
Sbjct: 610 -----NSISNGATSRASGIARWKLR-RLDLTGSKNLRELPDLSTAVNFEELIIQGCKRLR 663

Query: 595 ELPESLGRLSWVKRL 609
            +PES+ RL  +K+L
Sbjct: 664 NIPESIRRLHTLKKL 678


>gi|357500665|ref|XP_003620621.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495636|gb|AES76839.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1057

 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 226/718 (31%), Positives = 369/718 (51%), Gaps = 95/718 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT  L   L  K I  F D   L +G+ I   L   IE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YASS W                      FY VDPS VRKQS  +   F +  +RF
Sbjct: 80  IFSKNYASSTWCLQELEKICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRF 139

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            +   K+ RW+ AL +   +SG+D     P ++ I+EI   ++  L+  +   +K LVG+
Sbjct: 140 QQDSMKVSRWREALEQVGSISGWDLRD-EPLAREIKEIVQKIINILECKYSCVSKDLVGI 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +  I+ +++ L + S +GV  + I G+GGI K T+A  ++ +IS  F  S F   + +  
Sbjct: 199 DSPIQALQNHLLLNSVDGVRAIGICGMGGIGKTTLATTLYGQISHQFSASCF---IDDVT 255

Query: 216 ETGGIKD----LQKKLL-----SELSKDGNMRNIESQLNR-LARKKVRIVFDDVTS---- 261
           +  G+ D    +QK++L      E  +  N  +  + + R L  ++  ++ D+V      
Sbjct: 256 KIYGLHDDPLDVQKQILFQTLGIEHQQICNRYHATTLIQRKLCHERTLMILDNVDQVEQL 315

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+II +RD+ VLK    +  Y++  L + +AH LFC+ AF  + + 
Sbjct: 316 EKIAVHREWLGPGSRIIIISRDEHVLKAYGVDVVYKVSLLDWNEAHMLFCRKAFKDEKII 375

Query: 310 ASHIE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
            S+ + L D+ + YA+G+PLA+KVLG +L GR+   W+SA+ +L   P  ++ +VL++S+
Sbjct: 376 MSNYQNLVDQILHYAKGLPLAIKVLGSFLFGRNVTEWKSALTRLRQSPVKDVMDVLQLSF 435

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRM 415
           D L++++K++FL IACF   +  ++V +I +               KSL+++  +  I M
Sbjct: 436 DGLNETEKDIFLHIACFFNNDSEEDVKNILNCCGFHADIGLRVLIDKSLVSIS-YSIINM 494

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H LL ++GR+IV+  S   P K +RLW  + +Y V+ +N   + +E I L   K + E  
Sbjct: 495 HSLLEELGRKIVQNSSSKEPRKWSRLWSTEQLYDVMLENM-EKHVEAIVL-YYKEDEEAD 552

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKTL--NICAE 530
                 SKM  LR L F  +     +S + G P     ++R + W + P K L  N    
Sbjct: 553 FEH--LSKMSNLRLL-FIAN----YISTMLGFPSCLSNKLRFVHWFRYPSKYLPSNFHPN 605

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
           +LV L +  + ++QLW + + LP+         T ++   + LE++ D  E  NLE L +
Sbjct: 606 ELVELILTESNIKQLWKNKKYLPNLR-------TLDLRHSRNLEKIIDFGEFPNLERLDL 658

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           +G   + EL  S+G L  +  L L +  +L  IP +I  LS L +L +  C ++   P
Sbjct: 659 EGCINLVELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGLSSLQYLNMCGCSKVFNNP 716



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 114/285 (40%), Gaps = 53/285 (18%)

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---- 648
            +  +P+++  L W++RL L+ N +   +P S+R LSKL +L + HC+ L++LP+LP    
Sbjct: 777  LSHVPDAIECLHWLERLNLAGN-DFVTLP-SLRKLSKLVYLNLEHCKLLESLPQLPFPTN 834

Query: 649  ------------CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
                        C  GLL   NC  L           S+  + +  F+K +P   SEI  
Sbjct: 835  TGEVHREYDDYFCGAGLL-IFNCPKL----GEREHCRSMTLLWMKQFIKANPRSSSEI-- 887

Query: 697  DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
                             +  PG+EIP W  +Q MG S  +   P R    N +I    CA
Sbjct: 888  ----------------QIVNPGSEIPSWINNQRMGYSIAIDRSPIRHDNDNNIIGIVCCA 931

Query: 757  VVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCN 816
                  + + F        +   +  +       +E  L      K+S V +    L   
Sbjct: 932  AFTMAPYREIF--------YSSELMNLAFKRIDSNERLLKMRVPVKLSLVTTKSSHLWII 983

Query: 817  SFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                EY G +  EF  +I   F     +E  EV+ CG  +V  QD
Sbjct: 984  YLPREYPGYSCHEFG-KIELKFF---EVEGLEVESCGYRWVCKQD 1024


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 207/637 (32%), Positives = 330/637 (51%), Gaps = 76/637 (11%)

Query: 125 RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGG 184
           R E+++++EI + +++RL+    S  K +VG+   +E+++SL+      V  + I+GIGG
Sbjct: 4   RYETEVVKEIVDTIIRRLNHQPLSVGKNIVGIGVHLEKLKSLMNTELNMVSVVGIYGIGG 63

Query: 185 ISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIES 242
           + K TIA A++N+IS  ++GS F +N++E  + G I  LQ++LL  + +  N +  N++ 
Sbjct: 64  VGKTTIAKAIYNEISHQYDGSSFLINIKERSK-GDILQLQQELLHGILRGKNFKINNVDE 122

Query: 243 QLNRLAR----KKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANK 282
            ++ + R     +V ++FDDV                 + S +IIT+RDK VL    A+ 
Sbjct: 123 GISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQYGADI 182

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
           +Y + +L   +A +LF  WAF  +     +  L+   I YA G+PLALKVLG  L G+  
Sbjct: 183 RYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGKKI 242

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD--A 400
             WESA+ KL+I+PH+EI  VL+IS+D LDD  K +FLD+ACF +G+ RD V  I    A
Sbjct: 243 SNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRILGPHA 302

Query: 401 SKSLINLDLFYRIR-------MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
             ++  LD    I        MHDL++ MG EI+R+E    PG+R+RL    + Y VL  
Sbjct: 303 KHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLC-DSNAYHVLTG 361

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA--- 510
           N GT AIEG+ LD  K N    + + +F +M +LR L+ +  + K  +       F    
Sbjct: 362 NKGTRAIEGLFLDRCKFNPS-ELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYS 420

Query: 511 -EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD-------------------- 547
            E+ +L W   PL++L  N  A+ LV L +  + ++Q+W                     
Sbjct: 421 YELAYLHWDGYPLESLPMNFHAKNLVELSLRDSNIKQVWRGNKVLLLLFSYNFSSVPNLE 480

Query: 548 --------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIREL 596
                   +++ LP  +  +K   T     C  LER P+   ++  L  L + GT I +L
Sbjct: 481 ILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDL 540

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLS 655
           P S+  L+ ++ L+L     L +IP  I HLS L  L + HC  ++  +P   C+L  L 
Sbjct: 541 PSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQ 600

Query: 656 ARNCTS--LEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
             N        +P  ++ +S +  +NL  CN L+  P
Sbjct: 601 KLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 637



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 32/160 (20%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTV---------------- 588
            ++  LP S+C   +  T  +  C    +LPD L   ++LEYL V                
Sbjct: 1016 NLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGL 1075

Query: 589  --------KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
                    +G  +RE P  +  LS +  L L  N +  RIP+ I  L  L  L++ HC+ 
Sbjct: 1076 CSLRTLKLQGCNLREFPSEIYYLSSLVTLSLGGN-HFSRIPDGISQLYNLENLYLGHCKM 1134

Query: 641  LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
            LQ +PELP  L  L A +CTSLE     LSS S++L+ +L
Sbjct: 1135 LQHIPELPSGLFCLDAHHCTSLE----NLSSRSNLLWSSL 1170



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 12/130 (9%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+  T     C  LE  P+   ++E+L  L + GT I+E+P S+ RL 
Sbjct: 945  NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLR 1004

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L+L N  NL  +PESI +L+    L +S C     LP+   NLG L      SLE 
Sbjct: 1005 GLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD---NLGRLQ-----SLEY 1056

Query: 665  LPAG-LSSMS 673
            L  G L SM+
Sbjct: 1057 LFVGHLDSMN 1066


>gi|357474807|ref|XP_003607689.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508744|gb|AES89886.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1043

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 257/896 (28%), Positives = 409/896 (45%), Gaps = 146/896 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRGEDTR+NFT  L   L  K +  F DD  L +G++I+  L   IE S + ++
Sbjct: 23  YDVFVSFRGEDTRNNFTDFLFDALEEKGVFAFRDDTNLQKGESIAPELFHAIEGSQVFVV 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YA S W                      FY VDPS VRKQ+  +   F +   RF
Sbjct: 83  VLSKNYAFSTWCLKELEYILCCVQASKKYVLPVFYDVDPSLVRKQTGIYSEAFVQHGHRF 142

Query: 100 PEKMK---RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK-NKGLVG 155
            +  +   RW+ ALT+ ADLSG+D    R +S  I++I   ++  LD+   S  +  LVG
Sbjct: 143 KQDSQMVLRWRAALTQVADLSGWDLRDKR-QSLEIKKIVQRIITILDSKLSSSASNDLVG 201

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           ++   +E+E LL + S + V  + I G+GGI K T+   ++++IS  F    F  +V + 
Sbjct: 202 MDSPRQELEKLLLLDSVDDVHVVGICGMGGIGKTTLGMVLYDRISHQFGACCFIDDVSKM 261

Query: 215 EET-GGIKDLQKKLLSE-LSKDGN-MRNIESQLN----RLARKKVRIVFDDVT------- 260
                G  D+QK++L + L ++ N + N+ +  N    RL R++V ++FD+V        
Sbjct: 262 FRLHDGPLDVQKQILHQTLGENHNQICNLSTASNLIRRRLCRQRVLMIFDNVDKVEQLEK 321

Query: 261 ---------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS++II +RD+ +LKN   ++ Y++  L + ++ +L C+ AF  DH+  S
Sbjct: 322 IGVCREWLGEGSKIIIISRDEHILKNYGVDEVYKVPLLDWTNSLQLLCRKAFKLDHILNS 381

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +  L +  + YA G+PLA+KVLG +L GR    W SA+ +L+  P  ++ +VL++S+D L
Sbjct: 382 YEGLVNGILHYANGLPLAIKVLGSFLFGRDISEWRSALARLKESPEKDVMDVLRLSFDGL 441

Query: 372 DDSQKNVFLDIACFLE--------------GEHRDEVISIFDASKSLINLDLFYRIRMHD 417
            + +K +FL IACF                G H D  + +    KSLI++D    I MH 
Sbjct: 442 KEQEKEIFLHIACFFNQVWGKYLKNVLNCCGFHADIGLRVL-IDKSLISIDADGFIHMHG 500

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL ++GREIV++ S        R+W  K +  V+ +    + +E I L+      +    
Sbjct: 501 LLEELGREIVQENSSKEQRNWRRIWFVKQVNDVMLEKM-EKNVEAIVLNHENDGEDDAKM 559

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
                 + K+R LR    +     S        E+R++EW + P K L  +  + +LV L
Sbjct: 560 VTIVEHLSKMRHLRLLIVRCPVNTSGNLSCFSKELRYVEWSEYPFKYLPSSFDSNQLVEL 619

Query: 536 KMPCTKVEQLW------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELE---NLEYL 586
            +  + +EQLW       ++ ++P     F      ++  C  L +L   L     L YL
Sbjct: 620 ILEYSSIEQLWKGKSHSKNLIKMP-HFGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYL 678

Query: 587 TVKGT--------------TIRELPESLGRLSWVKRLILSNNSNLERIPES----IRHLS 628
            +K                 IR    S    S +KR +L  +S+L+  P +       L 
Sbjct: 679 NLKDCKCIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLPKHSSLQ-TPTTHTNLFSSLH 737

Query: 629 KLTFLFISHCERLQTLPELPC-------NLG-----------------LLSARNCTSLEK 664
            L  L +S C  LQ    + C       NLG                  LS  +C  L+ 
Sbjct: 738 SLCELNLSFCNLLQIPNAIGCLYWLEALNLGGNNFVTVPSLRELSKLVYLSLEHCKLLKS 797

Query: 665 LPAGLSSMSSV---LYVN--------------LCNFLKLDPNELSEIVKDGWMKHSLYEE 707
           LP  L S +++   LY N              + N  KL   E    +   WM   +   
Sbjct: 798 LPV-LPSPTAIEHDLYKNNLPAFGTRWPIGLFIFNCPKLGETERWSSMTFSWMIQFIQAN 856

Query: 708 RGI------KKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
           R        +  +  PG+E+P WF +QS G+   + + P      N ++    C V
Sbjct: 857 RQFSHDSSDRVQIVTPGSEMPSWFNNQSKGNLIRIDSSPIMHDNNNNIVGCVCCVV 912


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 204/598 (34%), Positives = 318/598 (53%), Gaps = 57/598 (9%)

Query: 127 ESKLIEEIANDVLKRLDATFQSKNKG-LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGI 185
           E+ +IE IA D++ RL +   + N G LVG+E  + ++  +L +GS GV  L I G+ G+
Sbjct: 2   EAGVIERIAEDIMARLGSQRHASNVGNLVGMELHMHQVYKMLGVGSGGVRFLGILGMSGV 61

Query: 186 SKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR------N 239
            K T+A  +++ I   F+G+ F   VR+     G++ LQ+ LLSE+     +R       
Sbjct: 62  GKTTLARVIYDNIRSQFQGTCFLHEVRDRSAKQGLERLQEILLSEILVVKKLRINDLFEG 121

Query: 240 IESQLNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKK 283
              Q  RL  KKV +V DDV                  GSR+IITT+DK +L      K 
Sbjct: 122 ANMQKQRLRYKKVLLVLDDVDHIDQLDTLAGEREWFGDGSRIIITTKDKHLLVKYETEKI 181

Query: 284 YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
           YRM  L   ++ +LF Q AF  +H      +L+ + I++  G+P+ALKVLG +L GR  +
Sbjct: 182 YRMGTLDKYESLQLFKQHAFKKNHPTKEFEDLSAQVIEHTGGLPVALKVLGSFLYGRGLD 241

Query: 344 VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--- 400
            W S + +L+ IP  EI + L+ S+  L++ ++ +FLDIACF  G+ +D V  I ++   
Sbjct: 242 EWLSEVERLKQIPQNEILKKLEPSFIGLNNIEQKIFLDIACFFSGKKKDSVTRILESFHF 301

Query: 401 ----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
                      K LI + L  RI +H L++DMG  IVR+E+  +P   +RLW  +DI  V
Sbjct: 302 SPVIGIKVLMEKCLITI-LQGRIAIHQLIQDMGWHIVRREASYNPRICSRLWKREDICPV 360

Query: 451 LKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA 510
           L++N  T+ IEGISL +     E++    AF +M  LRFL+F   +N  +    E +P  
Sbjct: 361 LERNLATDKIEGISLHLTN-EEEVNFGGKAFMQMTSLRFLKF---RNAYVCQGPEFLP-D 415

Query: 511 EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEII 568
           E+R L+W   P K+L  +   ++LVSL +  +++ QLW    +    L   K      + 
Sbjct: 416 ELRWLDWHGYPSKSLPNSFKGDQLVSLTLKKSRIIQLW----KTSKDLGKLK---YMNLS 468

Query: 569 DCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIR 625
             + L R PD   + NLE L ++   ++ E+  S+G L  +  L L N  NL+ +P+ IR
Sbjct: 469 HSQKLIRTPDFSVMPNLERLVLEECKSLVEINFSIGDLGKLVLLNLKNCRNLKTLPKRIR 528

Query: 626 HLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNLC 681
            L KL  L +S C +L+T PE+   +  L+      T+L +L A + ++S V  +NLC
Sbjct: 529 -LEKLEILVLSGCSKLRTFPEIEEKMNCLAELYLGATALSELSASVENLSGVGVINLC 585



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 143/343 (41%), Gaps = 61/343 (17%)

Query: 473 EIHMNSYAFSKM-PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEK 531
           E+++ + A S++   +  L   G  N C   HLE +P +  R     +C LKTL++    
Sbjct: 558 ELYLGATALSELSASVENLSGVGVINLCYCKHLESLPSSIFRL----KC-LKTLDVSG-- 610

Query: 532 LVSLKMPCTKVEQLWDD----------------VQRLPSSLCTFKTPITFEIIDCKML-- 573
                  C+K++ L DD                +Q +PSS+   K      +  C  L  
Sbjct: 611 -------CSKLKNLPDDLGLLVGLEEFHCTHTAIQTIPSSISLLKNLKHLSLRGCNALSS 663

Query: 574 ---------ERLPDELENLE------YLTVKGTTIRE--LPESLGRLSWVKRLILSNNSN 616
                    + +    +NL        L +    I +  +  +LG L  +  LIL  N N
Sbjct: 664 QVSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLAGLILDGN-N 722

Query: 617 LERIPE-SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV 675
              IP  SI  L++L  L ++ C RL++LPELP ++  + A  CTSL  +   L+  S +
Sbjct: 723 FSNIPAASISRLTRLEILALAGCRRLESLPELPPSIKEIYADECTSLMSIDQ-LTKYSML 781

Query: 676 LYVNLCNFLKLDPNELSEIVKDGWMKH---SLYEERGIKKSMYFPGNEIPKWFRHQSMGS 732
             V+     +L  N+    + D  +K     LY       SMY PG EIP+WF +++ G+
Sbjct: 782 HEVSFTKCHQLVTNKQHASMVDSLLKQMHKGLYLNGSF--SMYIPGVEIPEWFTYKNSGT 839

Query: 733 SATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDD 775
             ++    P+          A C  VVF     +   K   D+
Sbjct: 840 E-SISVALPKNWYTPTFRGIAIC--VVFDMMTPFILWKPNSDE 879


>gi|224062607|ref|XP_002300860.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222842586|gb|EEE80133.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 533

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 197/516 (38%), Positives = 282/516 (54%), Gaps = 62/516 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT HL+  LS + I TF D +++  G+ I    L  IE S  +I+
Sbjct: 15  YDVFLSFRGADTRSGFTDHLYSALSREGIHTFRDANEIDIGEEIGPECLQGIEKSRFSIV 74

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           I S+ YASS W                     FY +DPS V +Q  SF   F+   K F 
Sbjct: 75  ILSKGYASSPWCLDELVHILRCRKEGHGVWPVFYNIDPSDVEEQKGSFEEAFAEHEKSFK 134

Query: 101 E---KMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           +   K+++WK+AL E + L G D   ++   E++ I+ I  ++   LD T        VG
Sbjct: 135 DDMDKVEKWKDALREVSYLKGLDLRKHLDGHEAENIDYIVKEISVILDRTILRVAVHPVG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           ++   +E+ SLL   S  V  + I G+GGI K T+A  V+N + + FEGS F  NVR+  
Sbjct: 195 LDSRAKEVISLLDDESIDVRIVGIIGMGGIGKTTLAKEVYNLVFKRFEGSCFLENVRQQI 254

Query: 216 ETGGIKDLQKKLLSEL--SKDGNMRNIE--SQL--NRLARKKVRIVFDDVTS-------- 261
            + GI  LQ++LLS++   K   + N++  S++   RL  K+V IV DD+          
Sbjct: 255 ISSGIAYLQRQLLSDILKRKHEKIYNVDRGSKVIKERLRCKRVFIVLDDIEDKQEELDKI 314

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTR K +L+     ++Y +KEL  +D+ +L    AF     + S+
Sbjct: 315 LGNLDWLYPGSRVIITTRIKNLLQPSKLYRQYEVKELNGSDSLQLLSLHAFNKRCPNESY 374

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++   + + YA G PLAL VLG  LCG++ +VW S + KL++I H     +LKISYDSLD
Sbjct: 375 MDSASRIVSYAGGNPLALTVLGSDLCGQNIDVWNSRLEKLKVISHKGTHSILKISYDSLD 434

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            ++K++FLDIACF  G  +D V+SI D               + L+ +    +  MHDLL
Sbjct: 435 VAEKSIFLDIACFFIGYKKDYVMSILDGCGFFPIDGINTLTRRCLVKVGANNKFLMHDLL 494

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           RDMGREIV +ES   PGKR+RLWH +D+ ++L   T
Sbjct: 495 RDMGREIVLQESFMDPGKRSRLWHKEDVIELLTDRT 530


>gi|351727991|ref|NP_001235644.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452593|gb|ACM89623.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 1552

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 224/722 (31%), Positives = 351/722 (48%), Gaps = 107/722 (14%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
            YDVF+SFRGEDTR++FT  L   L  + I+ F DD+ IR G++I+  L+  IE S + ++
Sbjct: 474  YDVFVSFRGEDTRNSFTGFLFEALKKQGIEAFKDDKDIRKGESIAPELIRAIEGSHVFLV 533

Query: 61   IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-- 97
            +FS+ YASS W                      FY VDPS VRKQS  + + F++ ++  
Sbjct: 534  VFSKDYASSTWCLRELAHIWDCIQKSPRHLLPIFYDVDPSQVRKQSGDYEKAFAQHQQSS 593

Query: 98   RFPEK-MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS-KNKGLVG 155
            RF +K +K W+  L +  +LSG+D    + +  +IEEI   +   L   F +     LVG
Sbjct: 594  RFEDKEIKTWREVLNDVGNLSGWDIKN-KQQHAVIEEIVQQIKNILGCKFSTLPYDNLVG 652

Query: 156  VECSIEEIESLLCIG--SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
            +E     +  L+C+G  ++ V  + I G+GGI K T+  A++ +IS  F    +  +V +
Sbjct: 653  MESHFATLSKLICLGLVNDDVRVVGITGMGGIGKSTLGQALYERISHQFNSRCYIDDVSK 712

Query: 214  AEETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDVTS------ 261
              +  G   +QK+LLS+   + N++  N+ +       RL+  K  I+ D+V        
Sbjct: 713  LYQGYGTLGVQKELLSQSLNEKNLKICNVSNGTLLVWERLSNAKALIILDNVDQDKQLDM 772

Query: 262  ---------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                           GS VII +RD+Q+LK    +  YR++ L   DA  LFC+ AF  +
Sbjct: 773  FTGGRNDLLRKCLGKGSIVIIISRDQQILKAHGVDVIYRVEPLNDNDALGLFCKKAFKNN 832

Query: 307  HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
            ++ +   +LT   + + QG PLA++VLG  L  +    W SA+  L       I  VL+I
Sbjct: 833  YMMSDFEKLTSDVLSHCQGHPLAIEVLGSSLFDKDVLHWRSALALLRENKSKSIMNVLRI 892

Query: 367  SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRI 413
            S+D L+D+ K +FLDIACF        V  + D               KSLI +D   +I
Sbjct: 893  SFDQLEDTHKEIFLDIACFFNHYPVKYVKEVLDFRGFNPEYGLQVLVDKSLITMD-SRQI 951

Query: 414  RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL-DMNKVNR 472
            +MHDLL D+G+ IVR++S   P K +RLW  KDI +V+  N   + +E I L + + + R
Sbjct: 952  QMHDLLCDLGKYIVREKSPRKPWKWSRLWDVKDILKVMSDNKAADNVEAIFLIEKSDILR 1011

Query: 473  EIH-MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA---EVRHLEWPQCPLKTL--N 526
             I  M     S M  L+ L+         ++   G       E+ +L W + P + L  +
Sbjct: 1012 TISTMRVDVLSTMSCLKLLKLDHLDFNVKINFFSGTLVKLSNELGYLGWEKYPFECLPPS 1071

Query: 527  ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL 586
               +KLV L +P + ++QLW+  + LP                            NL  L
Sbjct: 1072 FEPDKLVELILPKSNIKQLWEGTKPLP----------------------------NLRRL 1103

Query: 587  TVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             + G+  + ++P  +G   +++ L L     LE I  SI    KLT L + +C+ L  LP
Sbjct: 1104 DLSGSKNLIKMP-YIGDALYLESLDLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLP 1162

Query: 646  EL 647
            + 
Sbjct: 1163 QF 1164



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 34/176 (19%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL--- 651
            E+P+++G +  ++RL LS N N   +P +++ LSKL  L + HC++L++LPELP  +   
Sbjct: 1295 EIPDAIGIMCCLQRLDLSGN-NFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSRIYNF 1352

Query: 652  -----GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP-NELSEIVKDGWMKHSLY 705
                   L   NC  L       + M+    +  C  L L P   +S +V          
Sbjct: 1353 DRLRQAGLYIFNCPELVDRER-CTDMAFSWTMQSCQVLYLCPFYHVSRVVS--------- 1402

Query: 706  EERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP 761
                       PG+EIP+WF ++  G+  +L   P      +  I  AFCA+ V P
Sbjct: 1403 -----------PGSEIPRWFNNEHEGNCVSLDASPVMHD--HNWIGVAFCAIFVVP 1445


>gi|357449875|ref|XP_003595214.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355484262|gb|AES65465.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1362

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 222/710 (31%), Positives = 368/710 (51%), Gaps = 85/710 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT  L   L  K I  F DD  L +G++I   LL  IE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALERKDIFAFRDDTNLQKGESIGSELLRAIEGSQVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS VRKQS  +   F +  +RF
Sbjct: 80  VFSRYYASSTWCLEELEKICECVQVPGKHVLPVFYDVDPSEVRKQSGIYHEAFVKHEQRF 139

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            +   K+ RW+ AL +   ++G+D    +P+   I++I   ++  L+      +K LVG+
Sbjct: 140 QQDLQKVSRWREALKQVGSIAGWDLRD-KPQCAEIKKIVQKIMNILECKSSCNSKDLVGI 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              IE +++ L + S +GV  + IWG+GGI K T+A  ++ +IS  F+ S F  +V +  
Sbjct: 199 NSRIEALKNHLLLDSVDGVRAIGIWGMGGIGKTTLALDLYGQISHRFDASCFIDDVSKIY 258

Query: 216 E--TGGIKDLQKKLLSELSKDGNM---RNIESQL--NRLARKKVRIVFDDVT-------- 260
               G ++  ++ +   L  + +    R   + L  +RL  ++  ++ D+V         
Sbjct: 259 RLHDGPLEAQKQIIFQTLGIEHHQICNRYSATYLIRHRLCHERALLILDNVDQVEQLEKI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR+II +RD+ +LK    +  Y++  L + D++KLFC+ AF  +++  S+
Sbjct: 319 DVHLEWLGAGSRIIIISRDEHILKKYGVDVVYKVPLLNWRDSYKLFCRKAFKVENIIMSN 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            + L ++ ++YA G+PLA+KV+G +L G +   W+SA+ +L   P  ++ +VL++S+D L
Sbjct: 379 YQNLANEILRYANGLPLAIKVMGSFLFGCNVTEWKSALARLRESPDKDVIDVLQLSFDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
             ++K +FLDIACF   E    V +I +              +KSLI+++    I MH L
Sbjct: 439 KHTEKEIFLDIACFFNSECEKYVKNILNCCGFHADIGLRVLINKSLISIN-GQNIEMHSL 497

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L ++GR+IV+  S N P K +RLW  + +Y V+      + +E I L   K   E+  ++
Sbjct: 498 LEELGRKIVQNSSSNDPRKWSRLWSTEQLYDVIMAKM-EKHVEAIVL---KYTEEV--DA 551

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
              SKM  LR L      +   +S        ++R++EWP+ P K L  +    +LV L 
Sbjct: 552 EHLSKMSNLRLLIIVN--HTATISGFPSCLSNKLRYVEWPKYPFKYLPTSFHPNELVELI 609

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-I 593
           +  + ++ LW + + LP+           ++ D + LE++ D  E  NLE+L ++G   +
Sbjct: 610 LDGSNIKNLWKNKKYLPNLR-------RLDLSDSRKLEKIMDFGEFPNLEWLNLEGCERL 662

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            EL  S+G L  +  L L +  NL  IP +I  LS L +L +  C ++ T
Sbjct: 663 VELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKVFT 712



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 34/176 (19%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + ++P+++  L WV+RL L  N +   +P S+R LSKL +L + HC+ L++LP+LP    
Sbjct: 772 LSQVPDTIECLHWVERLNLGGN-DFATLP-SLRKLSKLVYLNLQHCKLLESLPQLPFPTA 829

Query: 653 LLSARNCTSLEKLPAGL-----------SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
           +   R      + P GL              SS+ +  +  F+K +P  L+ I       
Sbjct: 830 IGRERVEGGYYR-PTGLFIFNCPKLGERECYSSMTFSWMMQFIKANPFYLNRI------- 881

Query: 702 HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
                       +  PG+EIP W  ++S+G S  +   P +    N +I F  CAV
Sbjct: 882 -----------HIVSPGSEIPSWINNKSVGDSIRIDQSPIKHD--NNIIGFVCCAV 924


>gi|227438129|gb|ACP30554.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1035

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 215/665 (32%), Positives = 326/665 (49%), Gaps = 70/665 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR    SHL+  L  + I TF DDQ L +GD+IS  L   ++ S  A++
Sbjct: 16  YDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEKGDHISDQLHIALKGSSFAVV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YA+SRW                      FY VDPS VR Q  SF     + R   
Sbjct: 76  VLSENYATSRWCLMELQLIMEYMKEGTLEVFPVFYGVDPSTVRHQLGSFSLERYKGRPEM 135

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             K+ +W+ AL   A+LSG DS     E+ ++ EIA D+ +R+    +  +  +VG++  
Sbjct: 136 VHKVHKWREALHLIANLSGLDSRHCVDEAVMVGEIARDISRRVTLMQKIDSGNIVGMKAH 195

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA--EET 217
           +E +  LL + S  V  L IWG+GGI K +IA  ++++IS  F    F  N++    E  
Sbjct: 196 MEGLNHLLDLESNEVVVLGIWGMGGIGKTSIAKCLYDQISPRFRARCFIENIKSVSKEHD 255

Query: 218 GGIKDLQKKLL-SELSKDGNMRNIE---SQLNRLARKKVRIVFDDVTSGSRVIITTRDKQ 273
             +K  QK++L S LS D ++ ++E   +Q++ LA++K     +    GSR+IITTRD  
Sbjct: 256 HDLKHFQKEMLCSILSDDISLWSVEAGLAQVHALAKEK-----NWFGPGSRIIITTRDMG 310

Query: 274 VLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVL 333
           +L  C     Y +  L   DA K+F Q AF G        +L+ +A + + G+P A++  
Sbjct: 311 LLNTCGVENVYEVNCLNDKDALKMFKQIAFEGPPPCDGFEQLSIRATRLSHGLPSAIQAH 370

Query: 334 GCYLCGRSK--EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHR 391
             +L GR+   EVWE A+  LE        E+LKISY+ L    +NVFL +AC   G+  
Sbjct: 371 ALFLRGRTAAPEVWEEALTALESSLDENTMEILKISYEGLPKPHQNVFLHVACLFNGDTL 430

Query: 392 DEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR 438
             + S+               A KSLI +     + MH L+  M RE++R ++      R
Sbjct: 431 QRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLVEQMAREMIRDDT---SLAR 487

Query: 439 NRLWHHKDI-YQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN 497
             L   +DI Y +     G E  E +SL    +     M +     M  L+FL+ Y   +
Sbjct: 488 KFLRDPQDICYALTNFRDGGEQTECMSLHSCNLACAFSMKASVVGHMHNLKFLKVYKHVD 547

Query: 498 KCMVSHLEGVP-----FAEVRHLEWPQCPLKTLNICAEK--LVSLKMPCTKVEQLWDDVQ 550
               S L+ +P        +R   W   PL+TL   A+   LV L +  + +  LW    
Sbjct: 548 S-RESKLQLIPDQHLLPPSLRLFHWDAFPLRTLPSDADPYFLVELNLRHSDLRTLWSGTP 606

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVK 607
            L S           ++   K L++LPD   + +L+ L ++  T ++ +PES+G+ S +K
Sbjct: 607 MLESL-------KRLDVTGSKHLKQLPDLSRITSLDELALEHCTRLKGIPESIGKRSTLK 659

Query: 608 RLILS 612
           +L LS
Sbjct: 660 KLKLS 664



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 32/154 (20%)

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-------TTI 593
           K++   +D + LP ++ +     T  + +C  L+ LP +L  ++ LT+           +
Sbjct: 809 KLDLSGNDFENLPEAMVSLTRLKTLWLRNCFKLKELP-KLTQVQTLTLTNCRNLRSLVKL 867

Query: 594 RELPESLGRLSWVKRLILSNNSNLE-----------------------RIPESIRHLSKL 630
            E  E  GR   ++ L L N +N+E                        +P SIR L+ L
Sbjct: 868 SETSEEQGRYCLLE-LCLENCNNVEFLSDQLVYFIKLTNLDLSGHEFVALPSSIRDLTSL 926

Query: 631 TFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             L +++C+ L+++ +LP +L  L A  C SLE+
Sbjct: 927 VTLCLNNCKNLRSVEKLPLSLQFLDAHGCDSLEE 960


>gi|357496097|ref|XP_003618337.1| Resistance protein [Medicago truncatula]
 gi|355493352|gb|AES74555.1| Resistance protein [Medicago truncatula]
          Length = 1205

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 241/758 (31%), Positives = 371/758 (48%), Gaps = 108/758 (14%)

Query: 12  DTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAIIIFSERYASSR 70
           D RD FT +L+  L    + TF+DD+ L RG  I+ SL+  IE S I I +FS+ YASS 
Sbjct: 170 DIRDGFTGNLYDALRKSGVHTFMDDEELQRGGEITPSLVKAIEESRIFIPVFSKDYASSS 229

Query: 71  W---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR---W 106
           +                      F  +DP+HVR Q+ S G   ++ +++F + MKR   W
Sbjct: 230 FCLDELVHIIRCSKSKGRPVLPVFCNIDPNHVRNQTGSIGEELAKHQEKFQKNMKRLREW 289

Query: 107 KNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE 164
           K AL +AADLSG  FD      ES  I+ I  +V +R+D       +  VG+E  + +++
Sbjct: 290 KKALKQAADLSGYHFDLAGTEYESNFIQGIVKEVSRRIDRVPLHVTEFPVGLESQVLKVK 349

Query: 165 SLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG-GIKD 222
           SL+ +G  +G   + I GIGGI K T+A  ++N+I   F+   F  +VRE   T  G+  
Sbjct: 350 SLMDVGCHDGAQMIGIHGIGGIGKTTLAKEIYNRIYDQFDKVCFLHDVREICSTKYGLVH 409

Query: 223 LQKKLLSEL----SKDGNM-RNIESQLNRLARKKVRIVFDDV----------------TS 261
           LQ++LL +      K G++   I+    RL +KKV ++ DDV                  
Sbjct: 410 LQEQLLFQTVGLNDKLGHVSEGIQFIKERLQQKKVLLILDDVDQPDQLKALAGDLNWFCG 469

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GS+VI+TTRDK +L +    K Y +  L   DA  L        + + +S+  + + A +
Sbjct: 470 GSKVIVTTRDKHLLASYGVEKTYEVNGLNEKDALDLLRWKVCKSNKIGSSYEGILEHASR 529

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
           Y+ G+PLAL+V+G  L G+SK+ W S + + E      I+++LK+S+D+L +  K++FLD
Sbjct: 530 YSSGLPLALEVVGSDLSGKSKDEWSSTLARYERTVPKNIQQILKVSFDALQEEDKSLFLD 589

Query: 382 IACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDLLRDMGREIV 427
           IACF +G   +E   I DA               KSLI + +   + +HDL+ +MG+EIV
Sbjct: 590 IACFFKGCRLEEFQDILDAHYTYCIKNHIGVLVEKSLIKI-IGGCVTLHDLIEEMGKEIV 648

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN-KVNREIHMNSYAFSKMPK 486
           R+ES   PGKR+RLW H+DI  VL  N+GT  IE + L+ +     E+        KM  
Sbjct: 649 RQESPKEPGKRSRLWSHEDIVPVLHANSGTRKIEILYLNFSLSKEEEVEWKGDELKKMEN 708

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLW 546
           LR +     +N       + +P   +R L+WP+ P +            K+   ++ +  
Sbjct: 709 LRTIII---RNCPFSKGCQHLPNG-LRVLDWPKYPSENF---TSDFFPRKLSICRLRE-- 759

Query: 547 DDVQRLPSSLCTFKTP------ITFEIID-------CKMLERLPDELENLEYLTVKGTTI 593
                  SSL TF+ P      + F           CK+         +L Y   K   +
Sbjct: 760 -------SSLTTFEFPSSSKVGVMFSFSSSCVPTHYCKITHFFSS--LSLFYFLQKFLCM 810

Query: 594 REL----PESLGRLSWVKRL----ILS--NNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           REL     +SL ++  +  L    ILS  + SNL  I  SI  L+KL  L ++ C +L +
Sbjct: 811 RELNLDHNQSLTQILDISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKLSS 870

Query: 644 LPELP-CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
            P +   +L  L   +C +L+  P  L  M  + Y+ L
Sbjct: 871 FPPIKLTSLLKLELSHCNNLKSFPEILGDMKHITYIEL 908



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 26/152 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR  FT +L+  L    + TF DD +L RG  I+ SL+  IE S I I 
Sbjct: 19  YNVFLSFRGADTRHGFTGNLYDALCKSGVHTFKDDEELQRGGEITASLMKAIEESRIFIP 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASS +                      FY + P+HVRKQ+ S G   ++ +++F
Sbjct: 79  VFSKNYASSSFCLDELVHIIRYSKSKGRLVLPVFYDIAPTHVRKQTGSIGEELAKHQEKF 138

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVI-RPE 127
            + M+R   WK AL EAA+LSG   N+  RP+
Sbjct: 139 QKNMERLQEWKMALKEAAELSGHHFNLAGRPD 170



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 32/211 (15%)

Query: 563  ITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSN------ 613
            +  E+  C  L+  P+   +++++ Y+ + GT+I + P S   LS V  L +        
Sbjct: 880  LKLELSHCNNLKSFPEILGDMKHITYIELVGTSIEQFPFSFQNLSMVHTLQIFGSGKPHN 939

Query: 614  ----NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL--SARNCTSLEKLPA 667
                N+    IP S  + S + FL +  C           N+ +L  S  N T L K   
Sbjct: 940  LSWINARENDIPSSTVY-SNVQFLHLIECNPSNDFLRRFVNVEVLDLSGSNLTVLSKCLK 998

Query: 668  GLSSMSSVLYVNLCNFLK--------------LDPNELSEIVKDGWMKHSLYEERGIKKS 713
                +   L +N C +L+              L  N L+   +   +   L+E+ G + S
Sbjct: 999  ECHFLQR-LCLNDCKYLQEITGIPPSLKRLSALQCNSLTSSCRSMLLSQHLHEDGGTEFS 1057

Query: 714  MYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
            +      +P+WF HQS G S +   R   P+
Sbjct: 1058 LAGSA-RVPEWFDHQSEGPSISFWFRGRFPS 1087


>gi|357499375|ref|XP_003619976.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494991|gb|AES76194.1| Disease resistance-like protein [Medicago truncatula]
          Length = 681

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 239/741 (32%), Positives = 356/741 (48%), Gaps = 141/741 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR +F  HL+  L    I+TFIDD +L  G+ I+ SL+  IE S IAI 
Sbjct: 17  YDVFLSFRGTDTRFHFIGHLYKALCDCGIRTFIDDKELHGGEEITPSLVKAIEDSGIAIP 76

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA+S +                      FY VDPSHVR Q+ S+G +   +    
Sbjct: 77  VFSINYATSSFCLDELVHIVDCFKTKGHLILPIFYEVDPSHVRHQTGSYGAYIGNM---- 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNV-----IRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E++++WK AL +AA+LSG   N+        E +LI ++  +V  +++          V
Sbjct: 133 -ERLRKWKIALNQAANLSGHHFNLGCLHNNSYEYELIGKMVQEVSNKINRPPLHVADYPV 191

Query: 155 GVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           G++  + ++ SLL IG  +GVC + I+GIGGI K T+A A++N I   FE   F  NVRE
Sbjct: 192 GLQSRLLQVNSLLNIGYDDGVCMVGIYGIGGIGKSTLARAIYNLIGDQFESLCFLHNVRE 251

Query: 214 AEETGGIKDLQKKLLSELS----KDGNM-RNIESQLNRLARKKVRIVFDDVTS------- 261
                G+++LQ+KLLSE      K G++   I     RL +KKV ++ DDV         
Sbjct: 252 NATKHGLQNLQEKLLSETVGLAIKLGHVSEGIPIIQQRLRQKKVILILDDVDELKQLQAI 311

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VI+TTRDK +L      + Y +  L   +A +LF   AF  + ++ + 
Sbjct: 312 IGEPNWLGHGSKVIVTTRDKHLLSCHGIERIYVVDGLKEEEALELFRWMAFKSNKIEPT- 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
                            L+V+G +L G+    WES + K E IPH  ++++L++S+D LD
Sbjct: 371 -----------------LEVVGSHLFGKCIAEWESTLAKYERIPHGHVQKILRVSFDCLD 413

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
           + +++VFLDI C   G    EV     A              +KSLI +     +R+HDL
Sbjct: 414 EEEQSVFLDITCCFNGCRLAEVEDKLHAHYGHCIKNHVGVLVNKSLIKIIRSTVVRLHDL 473

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           + DMG+EIVR+ES+   G+R RLW  KDI  VLK+NT T  IE I L+   +      N 
Sbjct: 474 IEDMGKEIVRQESVKEAGERTRLWFDKDIVHVLKENTETSKIEMIYLNGPSIEVLRDWNG 533

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMP 538
            AF KM  L+ L     K+          P + +R LEW                     
Sbjct: 534 KAFKKMKNLKTLII---KSGHFSKGSRYFP-SSLRVLEW--------------------- 568

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
                      QR PS    F        + C     LP+ LEN+ +       +  +  
Sbjct: 569 -----------QRYPSECIPFN-------VSC-----LPN-LENISFTNC--VNLITVHN 602

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL-GLLSAR 657
           S+G L+  K  ILS  S ++        L+ L  L +SHC+ L++ P++ C +  + + +
Sbjct: 603 SIGFLN--KLEILSAQSCVKLTSFPPLQLTSLKILNLSHCKSLRSFPDILCKMENIQNIQ 660

Query: 658 NCTSL-EKLPAGLSSMSSVLY 677
            C +L E  P    +++ + Y
Sbjct: 661 ICETLIEGFPVSFQNLTGLHY 681


>gi|51477386|gb|AAU04759.1| MRGH11 [Cucumis melo]
          Length = 1001

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 224/795 (28%), Positives = 378/795 (47%), Gaps = 131/795 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG D R  F  +L+  L+   IK F+D++  + GD++   L   I+ S  AI+
Sbjct: 16  YDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDL-HDLFKIIDESRSAIV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF------- 92
           + SE YAS++W                      FY +DPS V+ QS +F   F       
Sbjct: 75  VLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFKTSFDEHEANA 134

Query: 93  -----SRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ 147
                ++ +++  ++++ WKNAL +  + +G        E  ++ +IA+ +        +
Sbjct: 135 LKEIDNQEKEKRLKELQNWKNALKKIGNHTGVVITKNSSEVDIVNKIASQIFDAWRPKLE 194

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
           + NK LVG+   +  +   L +G + V  + I G+GGI K TIA  VF+ I   F+   F
Sbjct: 195 ALNKNLVGMTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFDDCCF 254

Query: 208 ALNVREAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS 261
            L +   +    +  LQ+++LS++    + +       +E   NRL+ +KV IV D    
Sbjct: 255 -LTLPGGDSKQSLVSLQREMLSQIFHKEDFKIWHENHGVEMIKNRLSGRKVLIVLDGAEE 313

Query: 262 ----------------GSRVIITTRDKQVLKNCWAN----KKYRMKELVYADAHKLFCQW 301
                           GSR+IITTR+K +L  C  N    K+Y ++EL +  A +LF + 
Sbjct: 314 RRQLEMLAGSTEWFGPGSRIIITTRNKGLL--CHPNYDEMKEYNVEELDHDSALQLFLKH 371

Query: 302 AFGGDHLDA-SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEI 360
           AFG +H +  S ++L+++ ++ A+ +PLAL+V+G  L G+   +W   +++L  +     
Sbjct: 372 AFGSNHQNKDSFMDLSNEIVEKAKRLPLALRVIGSSLYGKEITIWRETLKRLIKVDERNF 431

Query: 361 EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDL----------- 409
            ++LKISYD L    + VFLDI CF  G++ D V  I ++     N +L           
Sbjct: 432 FDILKISYDGLGVESQQVFLDITCFFNGKNEDRVNEILESFGYSPNSELQLLMQRCLIEV 491

Query: 410 -FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
              +I +HDL+ +MGREIVRKES+  P K++R+W H+D+Y    +      I+GI L + 
Sbjct: 492 SHKKILVHDLILEMGREIVRKESLTQPEKQSRIWLHEDLYCRFAEKHDLMHIQGIVLSLE 551

Query: 469 K-VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL-- 525
           K +   I +++ +FS+M KLR L     +    + +L  +    +R + W   P K+L  
Sbjct: 552 KEMEESIELDAESFSEMTKLRILEINNVELDEDIEYLSPL----LRIINWLGYPSKSLPP 607

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------------------------- 554
              +  L  L +P +++ ++WD  +R P                                
Sbjct: 608 TFQSRYLFELLLPHSQLLRVWDGKRRFPKLKLIDVSNSEHLRVTPDFSGVPNLERLVLCN 667

Query: 555 ---------SLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRL 603
                    S+ +    I  ++  C  L+  P  +  +NL+ L + GT +   PE +G +
Sbjct: 668 CVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANIRCKNLQTLKLSGTGLEIFPE-IGHM 726

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN---CT 660
             +  L L + S +  +  SI +L+ L FL +S C  L +LP    NL  L       C 
Sbjct: 727 EHLTHLHL-DGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLLLKYCK 785

Query: 661 SLEKLPAGLSSMSSV 675
            L+K+P  L++  S+
Sbjct: 786 RLDKIPPSLANAESL 800



 Score = 45.8 bits (107), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++PE L   S ++ L LS N N   +P+S+ HL KL  L +++C  L+ LP+LP +L  +
Sbjct: 871 DIPEDLHCFSSLETLDLSYN-NFTTLPDSLSHLKKLKTLILNYCTELKDLPKLPESLQYV 929

Query: 655 SARNCTSLEK 664
              +C S+ +
Sbjct: 930 GGVDCRSMSE 939


>gi|334183385|ref|NP_001185252.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332195282|gb|AEE33403.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1117

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 249/912 (27%), Positives = 406/912 (44%), Gaps = 181/912 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL        I  F D+ + R   I+ +L   I  S IAI++
Sbjct: 13  YNVFTSFHGPDVRIKFLSHLRQQFIYNGITMFDDNGIERSQIIAPALKKAIGESRIAILL 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPS VR Q+  FG  F      + 
Sbjct: 73  LSKNYASSSWSLDELLEILKCKEDIGQIVMTVFYEVDPSDVRNQTGDFGIAFKETCAHKT 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  ALT   +++G D      E+K+IE+IA DV   L+ T      G+VG+   
Sbjct: 133 EEERQKWTQALTYVGNIAGEDFKHWPNEAKMIEKIARDVSDILNVTPCRDFDGMVGLNDH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + E+ESLL + ++GV  + I G  GI K TIA A+  ++S  F+ + F  N+RE+ + G 
Sbjct: 193 LREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVDNLRESYKIGL 252

Query: 219 -----GIKDLQKKLLSELSKD----GNMRNIESQLNRLARKKVRIVFDDVT--------- 260
                 +   Q+ L   L++D    G++  ++ +L+ L   +V I+ DDV          
Sbjct: 253 DEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDL---RVLIILDDVEHLYQLEALA 309

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+TT ++++L        Y +      +A  +FC  AF         ++
Sbjct: 310 DIRWFGPGSRVIVTTENREILLQHGIKDIYHVGFPSEGEALMIFCLSAFRQPSPPYGFLK 369

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           LT +       +PL L VLG  L G+S+  W   + +L+      IE VLK+ Y+SL + 
Sbjct: 370 LTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCLDGRIESVLKVGYESLYEK 429

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFY----RIRMH 416
            + +FL IA +   ++ D V S+ +              A++ LI +D+ +    R+ M+
Sbjct: 430 DQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANRCLIQIDIDHNRKSRVVMN 489

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL+ M RE++ K+ I+   KR  L   +DI  VL++  G  +  G+SLD+ ++ +E+ +
Sbjct: 490 RLLQVMAREVISKQKIS---KRKILEDPQDICYVLEEAKGKGSALGLSLDVAEI-KELVI 545

Query: 477 NSYAFSKMPKLRFLRFYGDKN----KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
           N  AF KM  L  L+ +   +    K  V     +P + +R L W   P K+     E L
Sbjct: 546 NKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELP-SSIRLLHWEAYPRKSFRFGPENL 604

Query: 533 VSLKMPCTKVEQLWDDVQRL---------------------------------------- 552
           V+L M  +++E+LW   Q L                                        
Sbjct: 605 VTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNALVEI 664

Query: 553 PSSLCTFKTPITFEIIDCKMLERL-----------------------PDELENLEYLTVK 589
           PSS+      +   +  C+ LE +                       PD   +LE L ++
Sbjct: 665 PSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTSLEELVIE 724

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNL---------------------ERIPESIRHLS 628
            T ++ELP S    + V  L + +N NL                     E + +SI+ L 
Sbjct: 725 KTGVQELPASFRHCTGVTTLYICSNRNLKTFSTHLPMGLRKLDLSNCGIEWVTDSIKDLH 784

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            L +L +S C+RL +LPELPC+L  L A +CTSLE++   L+  ++       NF+K   
Sbjct: 785 NLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQF-----NFIKC-- 837

Query: 689 NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
                   D   + ++ ++  +  ++  P  E+ +   +++ G+  T+      P+ +N+
Sbjct: 838 -----FTLDREARRAIIQQSFVHGNVILPAREVLEEVDYRARGNCLTIP-----PSAFNR 887

Query: 749 LISFAFCAVVVF 760
              F  C V+V 
Sbjct: 888 ---FKVCVVLVI 896


>gi|15223549|ref|NP_176043.1| white rust resistance 4 protein [Arabidopsis thaliana]
 gi|12323031|gb|AAG51508.1|AC058785_11 disease resistance protein [Arabidopsis thaliana]
 gi|48310570|gb|AAT41840.1| At1g56510 [Arabidopsis thaliana]
 gi|110741855|dbj|BAE98869.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195280|gb|AEE33401.1| white rust resistance 4 protein [Arabidopsis thaliana]
          Length = 1007

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 253/882 (28%), Positives = 393/882 (44%), Gaps = 167/882 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL        I  F D+ + R   I+ +L   I  S +AI++
Sbjct: 13  YNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAPALKKAIGESRVAIVL 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPSHVRKQ+  FG  F      + 
Sbjct: 73  LSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKT 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+  +W  ALT   +++G D    + E+K+IE+IA DV  +++ T       +VG+E  
Sbjct: 133 EEERSKWSQALTYVGNIAGEDFIHWKDEAKMIEKIARDVSTKINVTPCRDFDDMVGLERH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE--T 217
           ++E+ SLL +  EGV  + I G  GI K TIA A+ ++ S  F+ + F  N+ E  +  T
Sbjct: 193 LKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICT 252

Query: 218 G--GIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----------- 261
           G  G+K  L ++ +S++ K   +   ++    +RL  KKV I+ DDV S           
Sbjct: 253 GEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETLADMT 312

Query: 262 ----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVI+TT +K++L+       Y++     ++A  +FC  AF         ++L D
Sbjct: 313 WFGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLAD 372

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + ++    +PLAL VLG  L  +S+  WE  + +L       IE VLK+ ++SL++  + 
Sbjct: 373 EVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNCLD-GIESVLKVGFESLNEKDQA 431

Query: 378 VFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFY-------RIRMHDLLRDM 422
           +FL I  F   E  D V  +   S        K+L N  L +       R+ +H LLR M
Sbjct: 432 LFLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVM 491

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
             ++  K+    P K   L   + I  VL++ TG  +I+G+S D  +++ E+ ++  AF 
Sbjct: 492 AIQVCTKQK---PWKSQILVDAEKIAYVLEEATGNRSIKGVSFDTAEID-ELMISPKAFE 547

Query: 483 KMPKLRFLRFYG---DKNKCMVSHLEGVPFAE-VRHLEWPQCPLKTL--NICAEKLVSLK 536
           KM  L FL+ Y       K  +   E + F   +R   W     K L  +  AE LV + 
Sbjct: 548 KMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSSFFAENLVEVN 607

Query: 537 MPCTKVEQLWDDVQ----------------------------------------RLPSSL 556
           M  +++++LW+  Q                                         LPSS+
Sbjct: 608 MQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPSSI 667

Query: 557 CTFKTPITFEIIDCKMLE-----------------------RLPDELENLEYLTVKGTTI 593
                     +  C+ LE                       R PD   ++E + V GTT+
Sbjct: 668 GNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTL 727

Query: 594 RELPESLGRLSWVKRLILSNNSNLE----RIPESIRH------------------LSKLT 631
            ELP SL   S ++ + +S + NL+     +P S+ H                  L  L 
Sbjct: 728 EELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCIKGLHNLH 787

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL 691
            L +S C+RL +LPELP +L +L A +C SLE L   L++ ++ LY    N  KLD    
Sbjct: 788 DLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNGHLNTPNAELY--FANCFKLDAEAR 845

Query: 692 SEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSS 733
             I++  +          +      PG E+P  F H++ G+S
Sbjct: 846 RAIIQQSF----------VSGWALLPGLEVPPEFGHRARGNS 877


>gi|42563187|ref|NP_177429.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197262|gb|AEE35383.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1163

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 232/718 (32%), Positives = 348/718 (48%), Gaps = 82/718 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR N  SHLH  L  K + TF DD+ +  GD+IS+ +   I+ S  A++
Sbjct: 12  YDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR-KR 98
           I SE YASS W                      FY VDPSHVR Q+ SF   F + +  +
Sbjct: 72  ILSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQTGSFT--FDKYQDSK 129

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            P K+  W+ ALT+ A L+G D      E+ +IEEI  D+ K+L          +VG+  
Sbjct: 130 MPNKVTTWREALTQIASLAGKDFETCEDEASMIEEIVKDISKKLLIMQPVDFSDIVGMNA 189

Query: 159 SIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            +E +  LL + SE  V  + IWG+GGI K TIA  +F++ S+ F    F  NV +    
Sbjct: 190 HMERLSPLLSMDSENEVRMIGIWGMGGIGKTTIAKCLFDQFSQGFPARCFLENVSKIYRK 249

Query: 218 GGIKDLQKKLLSE---LSKDGNMRNIESQLN------RLARKKVRIVFDDVTS------- 261
           GG+  L +K LS    LSK   M+    +L       R   +KV +V D+V         
Sbjct: 250 GGVSSLAEKFLSTTLGLSKK-KMKGSGVKLGPQEIKARFGCRKVFVVLDNVDDMRQMHAF 308

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRDK +L        Y +K +    A +LF Q AF G  L  S 
Sbjct: 309 AQESSWFGPGSRIIITTRDKGLLNTYGVRTVYEVKCMDNDAALQLFNQLAFKG-ALPPSE 367

Query: 313 I--ELTDKAIKYAQGVPLALKVLGCYLC-GRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
           +  +L+ +A   AQG+P+A++  G +     S + W+ A+ +    P   + E+LKISYD
Sbjct: 368 LYEKLSIRASWLAQGLPVAIEAYGLFFRRMTSLKEWDDALCRFIEAPDESVMEILKISYD 427

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L+++ KNVFL +AC   GE      ++ D             A KSLI +     I+MH
Sbjct: 428 GLEETDKNVFLHVACLFNGEPLRRATTLLDDGVLQGCLGLKILAEKSLIEITASGYIKMH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           +L+    R IV +ES+     R  LW+  +IY++LK+NT +E    ++L M  +   +H+
Sbjct: 488 NLVDQTARAIVNQESMQRRHGRGVLWNPYEIYELLKRNTTSEPTNCMALHMCDMVYALHL 547

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHL-----EGVPFAEVRHLEWPQCPLKTL--NICA 529
             Y  +    L+FL+ Y   N      L       +  + +R L W   PL T       
Sbjct: 548 GGYT-AYHDTLKFLKIYKHSNHIKSKLLFSGDDTNLLSSRLRLLHWDAFPLTTFPCRFQP 606

Query: 530 EKLVSLKMPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKM-LERLPDELENLEYL 586
           + LV + +  + +   W +  V+ L  S+      +   I+   +        + NL  L
Sbjct: 607 QDLVEIILHRSNLTSFWKETVVKALNRSMLITMYLLVLNILAIFLFFVEYAQGMPNLRRL 666

Query: 587 TVKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            +  +  + +LP+ L     ++ LI      L++IPESI +L++LT L +S+CE L +
Sbjct: 667 DLSDSENLEQLPD-LSMAVNLEELITQGCKRLKKIPESISYLTRLTTLDVSYCEELAS 723



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 592  TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            +IR + + L     +  L LS++   E++P SI  LS L  L ++ C++L+++  LP  L
Sbjct: 1023 SIRSILDQLRHFIKLSYLDLSSH-EFEKLPSSIEVLSSLRTLCLNKCKKLKSIEGLPLCL 1081

Query: 652  GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG 698
              L A  C  LE +   L+     L ++ C  LK D + +++ + +G
Sbjct: 1082 KSLYAHGCEILETVSLPLNHSVKHLDLSHCFGLKRDEHLIAQFLNEG 1128


>gi|297741883|emb|CBI33318.3| unnamed protein product [Vitis vinifera]
          Length = 1333

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 232/753 (30%), Positives = 365/753 (48%), Gaps = 123/753 (16%)

Query: 125 RPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGG 184
           R E+++++EI + +++RL+    S  K +VG+   +E+++SL+      V  + I+GIGG
Sbjct: 4   RYETEVVKEIVDTIIRRLNHQPLSVGKSIVGIGVHLEKLKSLMNTELNMVSVIGIYGIGG 63

Query: 185 ISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLL-----SELSKDGNMRN 239
           + K TIA A++N+IS  ++GS F +N++E  + G I  LQ++LL      +  K  N+  
Sbjct: 64  VGKTTIAKAIYNEISHQYDGSSFLINIKERSK-GDILQLQQELLHGILRGKFFKINNVNE 122

Query: 240 IESQLNRLAR-KKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANK 282
             S + R  R  +V ++FDDV                 + S +IIT+RDK VL     + 
Sbjct: 123 GNSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITSRDKHVLAQYGVDI 182

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y + +L   +A +LF  WAF  +     +  L+   I YA G+PLALKVLG  L G+  
Sbjct: 183 PYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYADGLPLALKVLGASLFGKKI 242

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD--A 400
             WESA+ KL+IIPH+EI  VL+IS+D LDD +K +FLDIACF +G+ RD V  I    A
Sbjct: 243 SNWESALCKLKIIPHMEIHNVLRISFDGLDDIEKGIFLDIACFFKGDDRDFVSRILGPHA 302

Query: 401 SKSLINLDLFYRIR-------MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
             ++  LD    I        MHDL++ MG EI+R+E    PG+R+RLW   +   VL +
Sbjct: 303 EHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLW-DSNANDVLIR 361

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV--SHL-EGVPFA 510
           N GT AIEG+ LD  K N  + + + +F +M +LR L  +  +   +    HL     F+
Sbjct: 362 NKGTRAIEGLFLDRCKFN-PLQITTESFKEMNRLRLLNIHNPREDQLFLKDHLPRDFEFS 420

Query: 511 --EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD------------------- 547
             E+ +L W   PL++L  N  A+ LV L +  + ++Q+W                    
Sbjct: 421 SYELTYLHWDGYPLESLPMNFHAKNLVQLVLRGSNIKQVWRGNKLHDKLRVIDLSYSFHL 480

Query: 548 ---------------------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENL 583
                                +++ LP ++   K         C  LER P+    +  L
Sbjct: 481 IGIPDFSSVPNLEILILIGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKL 540

Query: 584 EYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ- 642
             L + GT I +LP S+  L+ ++ L+L   S L +IP  I HLS L  L + HC  ++ 
Sbjct: 541 RVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEG 600

Query: 643 TLPELPCNLGLLSARNCT--SLEKLPAGLSSMSSVLYVNL--CNFLK-----------LD 687
            +P   C+L  L   N        +P  ++ +SS+  +NL  CN L+           LD
Sbjct: 601 GIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPSCLRLLD 660

Query: 688 PN------------ELSEIVK-----DGWMKHSLYEE---RGIKKSMYFPGNE-IPKWFR 726
            +             L  +V        W KH+ + +    G    +  PG++ IP+W  
Sbjct: 661 AHGSNRTSSRAPFLPLHSLVNCFRWAQDW-KHTSFRDSSYHGKGTCIVLPGSDGIPEWIL 719

Query: 727 HQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
           ++    S+ ++  P      N+ + FA C V V
Sbjct: 720 NRGDNFSSVIEL-PQNWHQNNEFLGFAICCVYV 751



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 58/268 (21%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+  T     C  LE +P+   ++E+L  L++ GT I+E+P S+ RL 
Sbjct: 957  NLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLR 1016

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP------------------- 645
             ++ L+LSN  NL  +PESI +L+ L FL +  C   + LP                   
Sbjct: 1017 GLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDS 1076

Query: 646  ---ELPCNLGLLSAR----NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP---------- 688
               +LP   GL S R       ++ ++P+ +  +SS++ + +  + K+ P          
Sbjct: 1077 MNFQLPSLSGLCSLRQLELQACNIREIPSEICYLSSLMPITVHPW-KIYPVNQIYSGLLY 1135

Query: 689  -NELSEIVKDGW------------MKHSLY----EERGIKKSMYFPGNEIPKWFRHQSMG 731
             N L+   + G+            ++  ++    E R   ++ +   N IP+W  HQ  G
Sbjct: 1136 SNVLNSKFRYGFHISFNLSFSIDKIQRVIFVQGREFRRSVRTFFAESNGIPEWISHQKSG 1195

Query: 732  SSATLKTRPPRPAGYNKLISFAFCAVVV 759
               T+K  P      +  + F  C++ V
Sbjct: 1196 FKITMKL-PWSWYENDDFLGFVLCSLYV 1222



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 577  PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE-------------- 622
            P EL++L     K  T   LP S+     +  L  S  S LE IPE              
Sbjct: 944  PLELDSLCLRDCKNLT--SLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLS 1001

Query: 623  ---------SIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLS 670
                     SI+ L  L +L +S+C+ L  LPE  CNL     L   +C S +KLP  L 
Sbjct: 1002 GTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLG 1061

Query: 671  SMSSVLYVNL 680
             + S+L++++
Sbjct: 1062 RLQSLLHLSV 1071


>gi|23477203|emb|CAD36200.1| TIR-NBS disease resistance protein [Populus trichocarpa]
          Length = 567

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 196/528 (37%), Positives = 278/528 (52%), Gaps = 78/528 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS  LL  ++ S I+I+
Sbjct: 15  YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAVQESKISIV 74

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DPS+VRKQ+ SF   F +  + 
Sbjct: 75  VFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSYVRKQNGSFAEAFVKHEEC 134

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA +LSG++ N +    E+K I+ I  DVL +L        + LVG
Sbjct: 135 FEEKLVKEWRKALEEAGNLSGWNLNDMANGHEAKFIKGIIKDVLNKLRRECLYVPEHLVG 194

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++    +I   L   ++ V  + I G+ GI K TIA  VFN++   FEGS F  ++ E +
Sbjct: 195 MDLD-HDISDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYRFEGSCFLSDINERS 253

Query: 215 EETGGIKDLQKKLLSELSK------DGNMRNIESQLNRLARKKVRIVFDDVT-------- 260
           ++  G+  LQK+LL ++ K      D   R       RL RK+V +V D+V         
Sbjct: 254 KQVNGLVPLQKQLLHDILKQDVADFDCVDRGKVLIKERLRRKRVLVVADNVAHLDQLNAL 313

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     SRVIITTR   +L+   A++ Y++KEL   ++ +LF   +F        +
Sbjct: 314 MGDRSWFGPRSRVIITTRYSSLLRE--ADQTYQIKELKPDESLQLFSWHSFKDTKPAEDY 371

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+ KA+ Y  G+PLAL+V+G  L  +++  WES +  L  IP+ +I+  L ISY +LD
Sbjct: 372 IELSKKAVDYCGGLPLALEVIGALLYRKNRGEWESEIDNLSRIPNQDIQGKLLISYHALD 431

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINL---------DL 409
              +  FLDIACF  G   + V  +  A               +SLI            L
Sbjct: 432 GELQRAFLDIACFFIGIEEEYVAKVLGARCRLNPEVVLKTLRERSLIQFHECIIKDERQL 491

Query: 410 FYR---IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
           F R   + MHDLLRDMGRE+VR+ S    GKR R+W+ +D + VL++ 
Sbjct: 492 FGRTVSVTMHDLLRDMGREVVRESSPLLLGKRTRIWNQEDAWNVLEQQ 539


>gi|356553715|ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 250/768 (32%), Positives = 383/768 (49%), Gaps = 92/768 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFR E T  +F + L   L    I TF  D Q  RG  I + L   IE   + I+
Sbjct: 19  YHVFLSFRTEGTHLDFANTLCTSLQRNGISTFRYDKQKERGYLILEKLHKVIEQCLVVIV 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASS W                      FY V PS VR Q + F   F     R 
Sbjct: 79  LLSENYASSTWCLDELHKILESKRVLGTPVFPLFYDVVPSDVRHQKNKFAEAFEEHATRP 138

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E   K+++W+ +L E A  SG++S   + + +LIEEI   V  +L     S + GLVG+
Sbjct: 139 EEDKVKVQKWRESLHEVAGFSGWESKNWK-KEELIEEIIESVWTKLRPKLPSYDDGLVGI 197

Query: 157 ECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           +  +E++ SLL +   + VC + IWG+GGI K T+A  VF KI   F+ S F  NVRE +
Sbjct: 198 DSRVEKMNSLLKLELKDKVCFIGIWGMGGIGKTTLARVVFKKIRNKFDISCFLENVREIS 257

Query: 215 EETGGIKDLQKKLLSELS-KDGNMRNIESQLNRLA----RKKVRIVFDDVTS-------- 261
           + + G+  LQ KLLS +  KD  ++N++   + +        V +V DDV          
Sbjct: 258 QNSDGMLSLQGKLLSHMKMKDLKIQNLDEGKSIIGGILFNNNVLLVLDDVNDIRQLENFS 317

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+II TRD +VL++    + Y++  L   ++ +LF Q AF  D      
Sbjct: 318 VNDQKWLGPGSRIIIITRDMEVLRSHGTVESYKIDLLNSDESLQLFSQKAFKRDQPLEHI 377

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L+  A++ A G+PLA++++G   CGRS+  W+  +   E      + + L ISYD L 
Sbjct: 378 LQLSKVAVQQAGGLPLAIEMMGSSFCGRSESQWKEFLEVKEYTKKDVVMDKLIISYDGLP 437

Query: 373 DSQKNVFLDIACFLEG---EHRDEVISI---FDAS-------KSLINLDLFYRIRMHDLL 419
            S K +FLDIACF  G   EH  ++++I   + A+       KSL   D   R+ MHDLL
Sbjct: 438 PSYKILFLDIACFFNGWVKEHVTQILTICGRYPANGIDVLIDKSLATYD-GSRLWMHDLL 496

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           ++MGR+IV +E     GKR+RLW  +D  Q LK+N   E I+GI L  +      + +  
Sbjct: 497 QEMGRKIVVEECPIDAGKRSRLWSPQDTDQALKRNKENELIQGIVLQSSTQPYNANWDPE 556

Query: 480 AFSKMPKLRFLRF-YGDKN-----KCMVSHLEGVPFAEVRHLEWPQCPLKT--LNICAEK 531
           AFSKM  L+FL   Y +       KC+ S +        + L+W  C LK   L +  E+
Sbjct: 557 AFSKMYNLKFLVINYHNIQVPRGIKCLCSSM--------KFLQWTGCTLKALPLGVKLEE 608

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG- 590
           LV LKM  +K++++W   Q   + L       + ++I+  ++  +P     LE L ++G 
Sbjct: 609 LVELKMRYSKIKKIWSGSQHF-AKLKFIDLSHSEDLIESPIVSGVP----CLEILLLEGC 663

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
             + E+ +S+G+   +  L L    NL+ +P     +  L  L +S C +++ LP    N
Sbjct: 664 INLVEVHQSVGQHKKLVLLNLKGCINLQTLPTKFE-MDSLEELILSGCSKVKKLPNFGKN 722

Query: 651 LGLLSARN---CTSLEKLPAGLSSMSSVLYVNLCNFLKLD--PNELSE 693
           +  LS  N   C +L  LP  + ++ S+  +++C   K    PN ++E
Sbjct: 723 MQHLSLVNLEKCKNLLWLPKSIWNLKSLRKLSICGCSKFSTLPNSMNE 770


>gi|357499453|ref|XP_003620015.1| Resistance protein [Medicago truncatula]
 gi|355495030|gb|AES76233.1| Resistance protein [Medicago truncatula]
          Length = 1065

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 220/741 (29%), Positives = 358/741 (48%), Gaps = 123/741 (16%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ---LIRGDNISQSLLGTIEASCIAI 59
           DVFL  +G DTR  FT +L   L  K I+TF DD    L R D ++  +   IE S I I
Sbjct: 19  DVFLICKGTDTRYGFTGNLLKALIDKGIRTFHDDDDSDLQRRDKVTPII---IEESRILI 75

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            IFS  YASS                        F+ V+P+ VR  +  +G+  +    R
Sbjct: 76  PIFSANYASSSSCLDTLVHIIHCYKTKGCLVLPVFFGVEPTDVRHHTGRYGKALAEHENR 135

Query: 99  FP------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           F       E++++WK AL+ AA+L  +  +    E +LI +I   +  ++          
Sbjct: 136 FQNDTKNMERLQQWKVALSLAANLPSYHDDSHGYEYELIGKIVKYISNKISRQSLHVATY 195

Query: 153 LVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG++  +++++SLL  G  +GV  + I+GIGG  K T+A A++N ++  FEG  F   V
Sbjct: 196 PVGLQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQV 255

Query: 212 REAEETGGIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVTS----- 261
           RE   +  +K  Q+ LLS+ L     + ++   ++    RL RKK+ ++ DDV +     
Sbjct: 256 RENSASNSLKRFQEMLLSKTLQLKIKLADVSEGISIIKERLCRKKILLILDDVDNMKQLN 315

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +L      K Y +K L   +A +L    AF  D + +
Sbjct: 316 ALAGGVDWFGPGSRVIITTRDKHLLACHEIEKTYAVKGLNVTEALELLRWMAFKNDKVPS 375

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+P+ ++++G  L G++ E  ++ +   E IP+ EI+ +LK+SYDS
Sbjct: 376 SYEKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRILKVSYDS 435

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLIN-LDLFYRIRM 415
           L++ +++VFLDIAC  +G   ++V  I  A               K LI+  +    + +
Sbjct: 436 LEEEEQSVFLDIACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSL 495

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H+L+ +MG+E+VR ES   PGKR+RLW  KDI++VL++NTGT  IE I ++++ +   I 
Sbjct: 496 HNLIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMNLHSMESVID 555

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
            N  AF KM     L+ +  +N   +  L+ +P +           L+ +  C       
Sbjct: 556 KNGKAFKKMTH---LKTFITENGYHIQSLKYLPRS-----------LRVMKGC------- 594

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
                        + R PSS                    L  +LEN++ L         
Sbjct: 595 -------------ILRSPSS------------------SSLNKKLENMKVLIFDNCQDLI 623

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-NLGLL 654
               +  L  +++   +   NL  I  S+R+L++L  L    CE+L++ P L   +L  L
Sbjct: 624 YTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPLQSPSLQNL 683

Query: 655 SARNCTSLEKLPAGLSSMSSV 675
              NC SL+  P  L  M+++
Sbjct: 684 ELSNCKSLKSFPELLCKMTNI 704


>gi|357474811|ref|XP_003607691.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508746|gb|AES89888.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1050

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 254/910 (27%), Positives = 406/910 (44%), Gaps = 180/910 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SF G+DTR+ FT HL   L  K+I  F D++ L  G +I  +L   IE S I I+
Sbjct: 9   YDVFVSFCGDDTRNKFTDHLFGALRRKNIAAFRDNRHLNSGASIEPALFRAIEVSQIFIV 68

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + S+ YASS W                       FY V+PS VRKQS S+ + F++  + 
Sbjct: 69  VLSKSYASSTWCLRELVYILLHCSQPSEKRVRTVFYDVNPSEVRKQSGSYAKAFAKHEEN 128

Query: 99  FPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F +   K+++W+ ALT+A ++SG D    +PE++ IE I  ++++     F      LVG
Sbjct: 129 FGQDHVKVRQWREALTQAGNISGCDLGN-KPENEEIETIVKEIVETFGYKFSYLPNDLVG 187

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVF--NKISRHFEGSYFALNVR 212
           +   IEE+E  L + S + V  + I G+ G+ K T+A  ++   K S  F+   F  +V 
Sbjct: 188 MLPPIEELEKCLLLDSVDKVLAVGICGMSGVGKTTLASVLYCNKKNSPQFDACCFIDDVS 247

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDV------- 259
           +     G    QK++L +   + +++  N+    N    RL+R +  I+FD+V       
Sbjct: 248 KKFRYYGPVGAQKQILHQTLGEEHIQIYNMYDAANLIQSRLSRCRALIIFDNVDDSEQLE 307

Query: 260 ---------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSR+II  RD  +L+    +  Y++  L   ++ +LFC+ AF  D++ +
Sbjct: 308 KLAVTRKSLAAGSRIIIVCRDAHILEEYGVDALYKVPFLNETNSLQLFCRKAFKCDNIKS 367

Query: 311 -SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
            S+ E+T   + YA G+PL +KVL  +L  RS   W SA+ +L   P+  I + L+  + 
Sbjct: 368 DSYEEMTYDMLNYANGLPLVIKVLSSFLYNRSISEWRSALARLGESPNKNIMDALQFGFY 427

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L+ ++  +FLDIACF  G     V ++ +               KSLI +    +I MH
Sbjct: 428 GLEKTEFEIFLDIACFFNGREEKFVKNVLNCCGFHPDIGLRVLVDKSLIRISDENKIEMH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            +  ++GR IV++ S     + + LW HK  Y V+ +N   + +E I L+ N+ + E  M
Sbjct: 488 GVFEELGRRIVQENSTKVARQWSILWLHKYCYDVMSENM-EKNVEAIVLNGNERDTEELM 546

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
              A S M +LR L     K    + +L      ++R++ W   P   L  N    +LV 
Sbjct: 547 VE-ALSNMSRLRLLILKDVKCLGRLDNLSN----QLRYVAWNGYPFMYLPSNFRPNQLVE 601

Query: 535 LKMPCTKVEQLWDDVQRLPSS--------------------------------------- 555
           L M  + ++QLW+  + LP+                                        
Sbjct: 602 LIMVDSSIKQLWEGKKNLPNLRTLDLSYSTNLIKMLDFGEVPNLERLNLEGCVKLVEMDL 661

Query: 556 -LCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT------------------- 592
            +C  K  +   + +C+ L  +P+    L +LEYL + G +                   
Sbjct: 662 FICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLCGCSKALNNLRHLEWPSLASLCC 721

Query: 593 IRE----------LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           +RE          LP  +  LS V+R  L  N     +P     LSKL +L + HC  L 
Sbjct: 722 LREVDISFCNLSHLPGDIEDLSCVERFNLGGNK-FVTLP-GFTLLSKLEYLNLEHCLMLT 779

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSS---MSSVLYVNLCNFLKLDPNELSEI--VKD 697
           +LPELP                 PA +      S+ +Y+  C+  +LD NE      +  
Sbjct: 780 SLPELPS----------------PAAIKHDEYWSAGMYIFNCS--ELDENETKRCSRLTF 821

Query: 698 GWMKHSLYEERGIKKS-----MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
            WM   +   +    S     +  PG+EIP WF +Q    S  +   P      + +I  
Sbjct: 822 SWMLQFILANQESSASFRSIEIVIPGSEIPSWFNNQREDGSICIN--PSLIMRDSNVIGI 879

Query: 753 AFCAVVVFPA 762
           A C  VVF A
Sbjct: 880 ACC--VVFSA 887


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 243/839 (28%), Positives = 395/839 (47%), Gaps = 130/839 (15%)

Query: 33  FIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW--------------------- 71
           F D ++ R   I+ +L+  I+ S I+II+ S+ YASS W                     
Sbjct: 2   FDDQEIERSQTIAPALIKAIKESRISIILLSKNYASSSWCLDELLEIVKCKEAMGQIVMT 61

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRKR-FPEKMKRWKNALTEAADLSGFDSNVIRPESKL 130
            FY VDPS VRKQ+  FGR F+    R   EK ++W  AL    +++G        ESK+
Sbjct: 62  VFYGVDPSDVRKQTGEFGRSFNETCSRSTKEKRRKWSQALNHVGNIAGEHFQNWDNESKM 121

Query: 131 IEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKIT 189
           IE+I+ D+  +L++T       +VG+E  +EE++ LL +   +G   + I G  GI K T
Sbjct: 122 IEKISRDISNKLNSTISRDFDDMVGLEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKTT 181

Query: 190 IAGAVFNKISRHFEGSYFALNVREAEETG----GIK-DLQKKLLSELSKDGNMR--NIES 242
           IA A+++ +   F+ S F  N+  ++  G    G K  LQ++LLS++     MR  ++ +
Sbjct: 182 IARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKLRLQEQLLSKILNQNGMRIYHLGA 241

Query: 243 QLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRM 286
              RL  +KV IV DDV                  GSR+I+TT DK +L+    NK Y +
Sbjct: 242 IQERLCDQKVLIVLDDVNDLKQLEALANETSWFGPGSRIIVTTEDKGLLEQHGINKTYHV 301

Query: 287 KELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWE 346
                 +A ++FC +AF          +LT +       +PL L+V+G  L G+ ++ WE
Sbjct: 302 GFPSIEEALEIFCIYAFRKSSPPDGFKKLTKRVTNVFDNLPLGLRVMGSSLRGKGEDEWE 361

Query: 347 SAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS----- 401
           + + +LE      IE  L++ YDSL + ++ +FL IA F      + VI++   S     
Sbjct: 362 ALLDRLETSLDRNIEGALRVGYDSLQEEEQALFLHIAVFFNYNKDEHVIAMLADSNLDVK 421

Query: 402 ---KSLINLDLFYR-----IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
              K L N  L YR     I MH LL+ +GR+ ++++    P KR+ L    +I  VL+ 
Sbjct: 422 QGLKILTNKSLVYRSTSGKIVMHKLLQQVGRKAIQRQ---EPWKRHILIDAHEICYVLEN 478

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK--NKCMVSHLEGVPF-A 510
           +T T A  GISLD + +N+ I ++  AF +M  LRFL  Y  +      V   E + F  
Sbjct: 479 DTDTRAALGISLDTSGINKVI-ISEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLEFPP 537

Query: 511 EVRHLEWPQCP--------LKTLNICAEKLVSL-KMPCTKVEQLWD--------DVQRL- 552
            +R L W   P        L+ L    + L +L KM  T+   L +        +++RL 
Sbjct: 538 HLRLLRWEAYPKLDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLE 597

Query: 553 ----------PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG---------- 590
                     PSS    +   T  I +C  LE +P    L +L++  + G          
Sbjct: 598 LSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCFQLKKFPGI 657

Query: 591 -----------TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                      T + ELP S+   + ++ L++S + N + +      L+ L       C 
Sbjct: 658 STHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCTGGCR 717

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
            L++LP+LP ++  L+A +C SLE + A +SS++S + +N  N  KL+     ++++  +
Sbjct: 718 NLKSLPQLPLSIRWLNACDCESLESV-ACVSSLNSFVDLNFTNCFKLNQETRRDLIQQSF 776

Query: 700 MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
                   R ++     PG E+P+ F HQ+ G+  T+  RP   + ++    F  C V+
Sbjct: 777 F-------RSLR---ILPGREVPETFNHQAKGNVLTI--RPESDSQFSASSRFKACFVI 823


>gi|62319955|dbj|BAD94052.1| disease resistance - like protein [Arabidopsis thaliana]
          Length = 1007

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 243/795 (30%), Positives = 370/795 (46%), Gaps = 130/795 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 48  HDVFPSFHGADVRRTFLSHIKESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 107

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY V+P+ ++KQ+  FG+ F++  R + 
Sbjct: 108 LSRKYASSSWCLDELAEIMKCREMVGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGKT 167

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E ++RW+ AL + A ++G+ S+    E+++IE+I+ DV K  D          VG+   
Sbjct: 168 KEHIERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSKDFD--------DFVGMAAH 219

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA----- 214
           +E  E LL +  + V  + I G  GI K TIA  +F++ SR F  +    ++RE      
Sbjct: 220 MERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRFPFAAIMTDIRECYPRLC 279

Query: 215 -EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
             E      LQ+++LS++   KD  + ++     RL  KKV +V D+V            
Sbjct: 280 LNERNAQLKLQEQMLSQIFNQKDTMISHLGVAPERLKDKKVFLVLDEVGHLGQLDALAKE 339

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         +L
Sbjct: 340 TRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPCEGFCDL 399

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +    A  +PL LKVLG  L G SK  WE  + +L      +I  +++ SYD+L D  
Sbjct: 400 AWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFSYDALCDED 459

Query: 376 KNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFY--RIRMHDLLRD 421
           K +FL IAC    E   +V  +              A KSLI+   FY   IRMH LL  
Sbjct: 460 KYLFLYIACLFNYESTTKVKELLGKFLDVKQGLHVLAQKSLIS---FYGETIRMHTLLEQ 516

Query: 422 MGREIVRKESINHPGKRNRLW-HHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSY 479
            GRE   K+ ++H  ++++L    +DI +VL  +T       GI+LD+ K  +E+ ++  
Sbjct: 517 FGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTRDNRRFIGINLDLRKNEKELKISEK 576

Query: 480 AFSKMPKLRFLRF---YGDKNKCMVSHL------EGVPFA---------EVRHLEWPQCP 521
              +M   +F+R    +  K +  + H       E V  A          +R L+W    
Sbjct: 577 TLERMHDFQFVRINDVFTHKERQKLLHFKIIHQPERVQLALEDLIYHSPRIRSLKW---- 632

Query: 522 LKTLNIC------AEKLVSLKMPCTKVEQLW-----------------DDVQRLPSSLCT 558
               NIC       E LV L M  +K+ +LW                 +D++ LP +L T
Sbjct: 633 FGYQNICLPSTFNPEFLVELDMSSSKLRKLWEGTKQLRNLKWMDLSDSEDLKELP-NLST 691

Query: 559 FKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNN 614
                  ++  C  L  LP  +E L  L +      +++ ELP S G  + +++L L N 
Sbjct: 692 ATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELP-SFGNATKLEKLDLENC 750

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAG-LSS 671
           S+L ++P SI + + L  L + +C R+  LP  E   NL  L  +NC+SL +LP   +  
Sbjct: 751 SSLVKLPPSI-NANNLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLSWVKR 809

Query: 672 MS--SVLYVNLCNFL 684
           MS   VL +N CN L
Sbjct: 810 MSRLRVLTLNNCNNL 824


>gi|15223551|ref|NP_176044.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12323030|gb|AAG51507.1|AC058785_10 disease resistance protein, putative [Arabidopsis thaliana]
 gi|332195281|gb|AEE33402.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 897

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 248/910 (27%), Positives = 405/910 (44%), Gaps = 181/910 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL        I  F D+ + R   I+ +L   I  S IAI++
Sbjct: 13  YNVFTSFHGPDVRIKFLSHLRQQFIYNGITMFDDNGIERSQIIAPALKKAIGESRIAILL 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPS VR Q+  FG  F      + 
Sbjct: 73  LSKNYASSSWSLDELLEILKCKEDIGQIVMTVFYEVDPSDVRNQTGDFGIAFKETCAHKT 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  ALT   +++G D      E+K+IE+IA DV   L+ T      G+VG+   
Sbjct: 133 EEERQKWTQALTYVGNIAGEDFKHWPNEAKMIEKIARDVSDILNVTPCRDFDGMVGLNDH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + E+ESLL + ++GV  + I G  GI K TIA A+  ++S  F+ + F  N+RE+ + G 
Sbjct: 193 LREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVDNLRESYKIGL 252

Query: 219 -----GIKDLQKKLLSELSKD----GNMRNIESQLNRLARKKVRIVFDDVT--------- 260
                 +   Q+ L   L++D    G++  ++ +L+ L   +V I+ DDV          
Sbjct: 253 DEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDL---RVLIILDDVEHLYQLEALA 309

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+TT ++++L        Y +      +A  +FC  AF         ++
Sbjct: 310 DIRWFGPGSRVIVTTENREILLQHGIKDIYHVGFPSEGEALMIFCLSAFRQPSPPYGFLK 369

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           LT +       +PL L VLG  L G+S+  W   + +L+      IE VLK+ Y+SL + 
Sbjct: 370 LTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCLDGRIESVLKVGYESLYEK 429

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFY----RIRMH 416
            + +FL IA +   ++ D V S+ +              A++ LI +D+ +    R+ M+
Sbjct: 430 DQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANRCLIQIDIDHNRKSRVVMN 489

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL+ M RE++ K+ I+   KR  L   +DI  VL++  G  +  G+SLD+ ++ +E+ +
Sbjct: 490 RLLQVMAREVISKQKIS---KRKILEDPQDICYVLEEAKGKGSALGLSLDVAEI-KELVI 545

Query: 477 NSYAFSKMPKLRFLRFYGDKN----KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
           N  AF KM  L  L+ +   +    K  V     +P + +R L W   P K+     E L
Sbjct: 546 NKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELP-SSIRLLHWEAYPRKSFRFGPENL 604

Query: 533 VSLKMPCTKVEQLWDDVQRL---------------------------------------- 552
           V+L M  +++E+LW   Q L                                        
Sbjct: 605 VTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNALVEI 664

Query: 553 PSSLCTFKTPITFEIIDCKMLERL-----------------------PDELENLEYLTVK 589
           PSS+      +   +  C+ LE +                       PD   +LE L ++
Sbjct: 665 PSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTSLEELVIE 724

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNL---------------------ERIPESIRHLS 628
            T ++ELP S    + V  L + +N NL                     E + +SI+ L 
Sbjct: 725 KTGVQELPASFRHCTGVTTLYICSNRNLKTFSTHLPMGLRKLDLSNCGIEWVTDSIKDLH 784

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            L +L +S C+RL +LPELPC+L  L A +CTSLE++   L+  ++       NF+K   
Sbjct: 785 NLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQF-----NFIKC-- 837

Query: 689 NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
                   D   + ++ ++  +  ++  P  E+ +   +++ G+  T+      P+ +N+
Sbjct: 838 -----FTLDREARRAIIQQSFVHGNVILPAREVLEEVDYRARGNCLTIP-----PSAFNR 887

Query: 749 LISFAFCAVV 758
              F  C V+
Sbjct: 888 ---FKVCVVL 894


>gi|449483054|ref|XP_004156480.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 539

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 186/516 (36%), Positives = 274/516 (53%), Gaps = 69/516 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR NFTSHLH  L  K I  FIDD +L RG+ I  SLL  IE S I+I+
Sbjct: 16  FDVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIV 75

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I SE YASS W                       FY+VDPSHVR+Q   FG  F++L+ R
Sbjct: 76  IISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVDPSHVRRQRGVFGEEFAKLQVR 135

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK---NKGLVG 155
           F  KM+ W  ALT  + +SG+D      E+ LI+ I  +V K+L  +  ++    K  VG
Sbjct: 136 FSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLKNSATTELDVAKYPVG 195

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA- 214
           ++  +  +  L  + S  +  + ++GIGG+ K T+A A++NKIS  FEG  F  NVREA 
Sbjct: 196 IDIQVSNL--LPHVMSNEITMVGLYGIGGMGKTTLAKALYNKISDDFEGCCFLANVREAS 253

Query: 215 EETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------- 261
            +  G+ +LQK L+ E+  D +++       I    +RL  KK+ ++ DD+ +       
Sbjct: 254 NQYWGLVELQKTLIREILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDIDTHEQLQAL 313

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VI TTR+KQ+L +   N   R+  L   +  +LF   AF   H  + +
Sbjct: 314 AGGHDWFGHGSKVIATTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFKNSHPSSDY 373

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLE-IIPHVEIEEVLKISYDS 370
           ++++ +A+ Y +G+PLAL+VLG +L     +  +E  + + E       I+++L+ISYD 
Sbjct: 374 LDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYENSYLDKGIQDILRISYDE 433

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD---------------ASKSLINLDLFYRIRM 415
           L+   K +FL I+C    E ++EV  +                    SL+ +D F R+ M
Sbjct: 434 LEQDVKEIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEM 493

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
           HDL++ MG  I   E+ N   KR RL   KD+  VL
Sbjct: 494 HDLIQQMGHTIHLLETSN-SHKRKRLLFEKDVMDVL 528


>gi|15229962|ref|NP_190026.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|186510665|ref|NP_001118772.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|7529774|emb|CAB86918.1| disease resistence-like protein [Arabidopsis thaliana]
 gi|332644378|gb|AEE77899.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644379|gb|AEE77900.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1007

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 242/795 (30%), Positives = 371/795 (46%), Gaps = 130/795 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + R  +I   L   I+ S IAI++
Sbjct: 48  HDVFPSFHGADVRRTFLSHIKESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVL 107

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY V+P+ ++KQ+  FG+ F++  R + 
Sbjct: 108 LSRKYASSSWCLDELAEIMKCREMVGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGKT 167

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E ++RW+ AL + A ++G+ S+    E+++IE+I+ DV K  D          VG+   
Sbjct: 168 KEHIERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSKDFD--------DFVGMAAH 219

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA----- 214
           +E  E LL +  + V  + I G  GI K TIA  +F++ SR F  +    ++RE      
Sbjct: 220 MERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRFPFAAIMTDIRECYPRLC 279

Query: 215 -EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------- 260
             E      LQ+++LS++   KD  + ++     RL  KKV +V D+V            
Sbjct: 280 LNERNAQLKLQEQMLSQIFNQKDTMISHLGVAPERLKDKKVFLVLDEVGHLGQLDALAKE 339

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         +L
Sbjct: 340 TRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPCEGFCDL 399

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             +    A  +PL LKVLG  L G SK  WE  + +L      +I  +++ SYD+L D  
Sbjct: 400 AWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFSYDALCDED 459

Query: 376 KNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFY--RIRMHDLLRD 421
           K +FL IAC    E   +V  +              A KSLI+   FY   IRMH LL  
Sbjct: 460 KYLFLYIACLFNYESTTKVKELLGKFLDVKQGLHVLAQKSLIS---FYGETIRMHTLLEQ 516

Query: 422 MGREIVRKESINHPGKRNRLW-HHKDIYQVLKKNT-GTEAIEGISLDMNKVNREIHMNSY 479
            GRE   K+ ++H  ++++L    +DI +VL  +T       GI+LD+ K  +E+ ++  
Sbjct: 517 FGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTRDNRRFIGINLDLRKNEKELKISEK 576

Query: 480 AFSKMPKLRFLRF-----YGDKNKCM----VSHLEGVPFA---------EVRHLEWPQCP 521
              +M   +F+R      + ++ K +    +   E V  A          +R L+W    
Sbjct: 577 TLERMHDFQFVRINDVFTHKERQKLLHFKIIHQPERVQLALEDLIYHSPRIRSLKW---- 632

Query: 522 LKTLNIC------AEKLVSLKMPCTKVEQLW-----------------DDVQRLPSSLCT 558
               NIC       E LV L M  +K+ +LW                 +D++ LP +L T
Sbjct: 633 FGYQNICLPSTFNPEFLVELDMSSSKLRKLWEGTKQLRNLKWMDLSDSEDLKELP-NLST 691

Query: 559 FKTPITFEIIDCKMLERLPDELENLEYLTV----KGTTIRELPESLGRLSWVKRLILSNN 614
                  ++  C  L  LP  +E L  L +      +++ ELP S G  + +++L L N 
Sbjct: 692 ATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELP-SFGNATKLEKLDLENC 750

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLP--ELPCNLGLLSARNCTSLEKLPAG-LSS 671
           S+L ++P SI + + L  L + +C R+  LP  E   NL  L  +NC+SL +LP   +  
Sbjct: 751 SSLVKLPPSI-NANNLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLSWVKR 809

Query: 672 MS--SVLYVNLCNFL 684
           MS   VL +N CN L
Sbjct: 810 MSRLRVLTLNNCNNL 824


>gi|7488167|pir||B71437 probable resistance gene - Arabidopsis thaliana
          Length = 1422

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 257/833 (30%), Positives = 376/833 (45%), Gaps = 173/833 (20%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           D+F SF GED R NF SHL   L+ +SI TF+D  + R   I+ +L+  I  + I+I+IF
Sbjct: 10  DIFPSFSGEDVRKNFLSHLLKQLNRRSINTFMDHVIERSCIIADALISAIREARISIVIF 69

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE 101
           S+ YA+S W                      FY VDPSHVRKQ   FG+ F +  +  P 
Sbjct: 70  SKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPSHVRKQIGEFGKVFKKTCEDKPA 129

Query: 102 KMK-RWKNALTEAADLSGFD-----------------------------------SNVIR 125
             K RW  ALT+ ++++G D                                   + VIR
Sbjct: 130 DQKQRWVKALTDISNIAGEDLRNGYVVLIPLFITIQYFLHRLGCAFKGASLLTHLTIVIR 189

Query: 126 P-ESKLIEEIANDVLKRLDATFQSKNKG-LVGVECSIEEIESLLCIGS-EGVCKLRIWGI 182
           P ++ ++E+IANDV  +L      K  G LVG+E  IE I+S+LC+ S E    + IWG 
Sbjct: 190 PNDAHMVEKIANDVSNKL--FHPPKGFGDLVGIEDHIEAIKSILCLESKEAKIMVGIWGQ 247

Query: 183 GGISKITIAGAVFNKISRHFE-GSYFALNVREAEETGGIK-DLQKKLLSEL--SKDGNMR 238
            GI K TI  A+F+++S  F   ++         +  G+K   QK+LLSE+   KD  + 
Sbjct: 248 SGIGKSTIGRALFSQLSSQFPLRAFVTYKSTSGSDVSGMKLSWQKELLSEILGQKDIKID 307

Query: 239 NIESQLNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANK 282
           +      RL  KKV I+ DDV                 SGSR+I+ T+D+Q+LK    + 
Sbjct: 308 HFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDL 367

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y +K      A ++  Q+AFG D        L  +  + A  +PL L VLG  L GR K
Sbjct: 368 VYEVKLPSQGLALQMISQYAFGKDSPPDDFKALAFEVAELAGSLPLGLSVLGSSLKGRDK 427

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASK 402
           + W   M +L      +IEE L++ YDS          ++   LE    D+V       K
Sbjct: 428 DEWVKMMPRLRNDSDDKIEETLRVCYDS----------NVKELLE----DDVGLTMLVEK 473

Query: 403 SLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEG 462
           SLI +     I MH+LL  +GREI R +S  +PGKR  L + +DI +VL + TGTE + G
Sbjct: 474 SLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIQEVLAEKTGTEILLG 533

Query: 463 ISLDMNK--VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC 520
           I L        R   ++   F  M  L++L      +  +   L  +P  ++R LEW  C
Sbjct: 534 IRLPHPGYLTTRSFLIDEKLFKGMRNLQYLEIGYWSDGDLPQSLVYLPL-KLRLLEWVYC 592

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITF 565
           PLK+L     AE LV L M  +K+E+LW+    L S              +      I  
Sbjct: 593 PLKSLPSTFRAEYLVKLIMKNSKLEKLWEGTLPLGSLKKMNLWYSKYFKEIPDLSLAINL 652

Query: 566 E---IIDCKMLERLPDELE-------------------------NLEYLTV-----KGTT 592
           E   + +C+ L  LP  ++                         NLEYL+V     +GT 
Sbjct: 653 EELNLSECESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDCSRMEGTQ 712

Query: 593 -IRELPESLGRLSW----VKRL-----------ILSNNSNLERIPESIRHLSKLTFLFIS 636
            I   P  L  L W    +KRL           +   NS+LE++ +  + L +L  +F+ 
Sbjct: 713 GIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLR 772

Query: 637 HCERLQTLPELPCNLGL---------LSARNCTSLEKLPAGLSSMSSVLYVNL 680
             + L+ +P+L   + L         L   +C  LE  P  L ++ S+ Y+NL
Sbjct: 773 GSKYLKEIPDLSLAINLEENAIKLIYLDISDCKKLESFPTDL-NLESLEYLNL 824



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 530  EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KLV L+M  CT +E L  DV           +  T ++  C  L   P   +++++L +
Sbjct: 954  QKLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRTFPLISKSIKWLYL 1005

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
            + T I E+ + L + + ++ LIL+N  +L  +P +I +L  L  L++  C  L+ LP   
Sbjct: 1006 ENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV 1064

Query: 649  --CNLGLLSARNCTSLEKLP 666
               +LG+L    C+SL   P
Sbjct: 1065 NLSSLGILDLSGCSSLRTFP 1084



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
            E LV L + C K E+LW+ +Q L S           ++ + + L  +PD  +  NL++L 
Sbjct: 884  EYLVFLNVRCYKHEKLWEGIQSLGSLE-------EMDLSESENLTEIPDLSKATNLKHLY 936

Query: 588  VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +    ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 937  LNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPL 995

Query: 647  L----------------------PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCN 682
            +                         L  L   NC SL  LP+ + ++ ++  LY+  C 
Sbjct: 996  ISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1055

Query: 683  FLKLDPNELS 692
             L++ P +++
Sbjct: 1056 GLEVLPTDVN 1065



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 14/152 (9%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDE--LENLEYLTVKG-TTIRELPESLGRLSWVKR 608
            LPS++   +  +  E+ +C  LE LP +  L +LE L + G +++R  P     + W   
Sbjct: 946  LPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISKSIKW--- 1002

Query: 609  LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKL 665
             +   N+ +E I + +   +KL  L +++C+ L TLP    NL     L  + CT LE L
Sbjct: 1003 -LYLENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVL 1060

Query: 666  PA--GLSSMSSVLYVNLCNFLKLDPNELSEIV 695
            P    LSS+  +L ++ C+ L+  P   + IV
Sbjct: 1061 PTDVNLSSL-GILDLSGCSSLRTFPLISTNIV 1091



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 37/238 (15%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            CT +E L  DV    SSL         ++  C  L   P    N+ +L ++ T I E+P 
Sbjct: 1054 CTGLEVLPTDVNL--SSLGIL------DLSGCSSLRTFPLISTNIVWLYLENTAIGEVPC 1105

Query: 599  SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER-LQTLPELPCNLGLLSAR 657
             +   + ++ L++     L+ I  +I  L  L F   + C   ++ L +      +    
Sbjct: 1106 CIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCRGVIKALSDATVVATMEDHV 1165

Query: 658  NCTSL--------EKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERG 709
            +C  L        E+    L S S       CN  KL+  +  E++     KH       
Sbjct: 1166 SCVPLSENIEYTCERFWDALESFS------FCNCFKLE-RDARELILRSCFKH------- 1211

Query: 710  IKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF 767
                +  PG EIPK+F +++ G S T+    P+ +       F  C VV  P+  K F
Sbjct: 1212 ----VALPGGEIPKYFTYRAYGDSLTVTL--PQSSLSQYFFPFKACVVVEPPSEGKGF 1263


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1336

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 240/765 (31%), Positives = 362/765 (47%), Gaps = 161/765 (21%)

Query: 8   FRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAIIIFSERY 66
           FRG+DTR+NFTSHL+  L  + I  ++DD +L RG  I  +L   IE S  ++IIFS  Y
Sbjct: 1   FRGKDTRNNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRDY 60

Query: 67  ASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR 105
           ASS W                      FY VDPS V +Q   + + F    + F E +++
Sbjct: 61  ASSPWCLDELVKIVQCMKETGHTVLPVFYDVDPSEVAEQKGQYEKAFVEHEQNFKENLEK 120

Query: 106 ---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
              WK+ L+   +LSG+D    R ES+ I+ I   +  +L  T  + +K LVG++  ++ 
Sbjct: 121 VQIWKDCLSTVTNLSGWDVRN-RNESESIKIIVEYISYKLSVTLPTISKKLVGIDSRVKV 179

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIK 221
           +   +         + I G+GGI K T+A  +++KI   FEGSYF  NVRE   E GG +
Sbjct: 180 LNGYIGEEVGKAIFIGICGMGGIGKTTVARVLYDKIRWQFEGSYFLANVREVFAEKGGPR 239

Query: 222 DLQKKLLSEL-----SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------------- 261
            LQ++LLSE+     S   + R IE    RL  KK+ ++ DDV                 
Sbjct: 240 RLQEQLLSEILMECASLKDSYRGIEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFG 299

Query: 262 -GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
            GSR+IIT+RD  V       K Y  ++L   DA  LF Q AF  D      ++L+ + +
Sbjct: 300 PGSRIIITSRDTNVFTGNDDTKIYEAEKLNDDDALMLFNQKAFKNDQPTEDFVKLSKQVV 359

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            YA G+PLAL+V+                                               
Sbjct: 360 GYANGLPLALEVI----------------------------------------------- 372

Query: 381 DIACFLEGEHRDEVISIFDA--------SKSLINLDLF--YR--IRMHDLLRDMGREIVR 428
           DIACFL+G  +D +I I D+        ++ LI   L   YR  + MHDLL+ MG+EIVR
Sbjct: 373 DIACFLKGFEKDRIIRILDSCGFHAHIGTQVLIERSLISVYRDQVWMHDLLQIMGKEIVR 432

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
            ES   PG+R+RLW  +D+   L  NTG E IE I LDM ++ +E   N  AFSKM +LR
Sbjct: 433 SESSEEPGRRSRLWTFEDVRLALMDNTGKEKIEAIFLDMPEI-KEAQWNMEAFSKMSRLR 491

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
            L+     +   +S        ++R LEW   P K+L   +  ++LV L M  + +EQLW
Sbjct: 492 LLKI----DNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLW 547

Query: 547 DDVQ--------RLPSSLCTFKTP-IT-------------------------------FE 566
              +         L +SL   KTP +T                                 
Sbjct: 548 YGCKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMN 607

Query: 567 IIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
           +++CK +  LP+  E+E+L+  T+ G + + + P+ +G ++ +  L L + + +E +  S
Sbjct: 608 LVNCKSIRILPNNLEMESLKVFTLDGCSKLEKFPDIVGNMNCLMELRL-DGTGVEELSSS 666

Query: 624 IRHLSKLTFLFISHCERLQTLP-ELPC--NLGLLSARNCTSLEKL 665
           I HL  L  L +++C+ L+++P  + C  +L  L    C+ L+ L
Sbjct: 667 IHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNL 711



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 140/311 (45%), Gaps = 47/311 (15%)

Query: 574  ERLPD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
            +RLP    L +LE L +    +RE  LPE +G LS +K L LS N N   +P S+  LS 
Sbjct: 758  QRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRN-NFVSLPRSVNQLSG 816

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
            L  L +  C  L++LPE+P  +  ++   CTSL+++P  +   SS     +  FL L+  
Sbjct: 817  LEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLKEIPDPIKLSSS----KISEFLCLNCW 872

Query: 690  ELSEIVKDGWMKHSLYEE--RGIKK-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPR 742
            EL E      M  ++ E   +G+        +  PGNEIP WF HQS GSS +++     
Sbjct: 873  ELYEHNGQDSMGLTMLERYLQGLSNPRPGFGIAVPGNEIPGWFNHQSKGSSISVQV---- 928

Query: 743  PAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGK 802
            P+      S  F A V F A+              G    + CD+K     +  S     
Sbjct: 929  PSW-----SMGFVACVAFSAY--------------GERPFLRCDFKANGRENYPSLMCIN 969

Query: 803  ISYVESDHVFLGCNSFGGEYFGPNYDEFSF-RIHCSFHFPPYLERGEVKKCGIHF----- 856
               V SDH++L   SF        +   SF  I  SFH   Y  R +VK CG+       
Sbjct: 970  SIQVLSDHIWLFYLSFDYLKELKEWQNESFSNIELSFH--SYERRVKVKNCGVCLLSSVC 1027

Query: 857  VYAQDSADHIL 867
            + AQ S+ H +
Sbjct: 1028 ITAQPSSAHFI 1038


>gi|356542397|ref|XP_003539653.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 251/768 (32%), Positives = 382/768 (49%), Gaps = 120/768 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSF G  T + F   L   L  K I  F  +     D  ++  +  IE S + I++
Sbjct: 15  YDVFLSFSG-GTSNPFVDPLCRALRDKGISIFRSE-----DGETRPAIEEIEKSKMVIVV 68

Query: 62  FSERYASSR--------------------W-FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           F + YA S                     W  FY V+PS VRKQ +S+    +     + 
Sbjct: 69  FCQNYAFSTESLDELVKIREYVDNRRKQVWTIFYIVEPSDVRKQRNSYKDAMNGHEMTYG 128

Query: 100 --PEKMKRWKNALTEAADLSGF--DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
              EK+K W+ ALT   DLSG     ++   E + I E A+  L R+           VG
Sbjct: 129 KDSEKVKAWREALTRVCDLSGIHCKDHMFEAELQKIVEAASCKLFRVPGQMNHA----VG 184

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRH--FEGSYFALNVR 212
           ++   E++++ + + S + V  L I+G GGI K T A  ++ KI RH  FE + F + VR
Sbjct: 185 LDDHFEQVKAFIDVESNDKVGVLGIYGGGGIGKTTFAVYLYEKI-RHYYFEAASFLIKVR 243

Query: 213 EA--EETGGIKDLQKKLLSELSKD-----GNMRNIESQL-NRLARKKVRIVFDDVTS--- 261
           E   E    ++DLQ +LLS+L  D     G+    E ++ +RL  ++V +V DDV S   
Sbjct: 244 EQSKESKNHLEDLQNRLLSQLGVDTGTMIGSTNKGELEIKHRLGHRRVLLVLDDVDSKEQ 303

Query: 262 -------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GSR+IITTRD+ VL      KKY+M EL    + +LFCQ AF     
Sbjct: 304 LELLAGKHDWFGSGSRIIITTRDEAVLDYGVKVKKYKMTELNDRHSLELFCQNAFDKPEP 363

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
             +   ++ +AI YA+GVPLAL+V+G  L GRS E WE  + K   +P+ +I+ VLK+S+
Sbjct: 364 AKNFESISHRAIGYAKGVPLALQVIGSNLKGRSIEEWEIELGKYRKVPNAKIQGVLKLSF 423

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLL 419
           DSL +++  +FLDIACF +GE  + V  I           ASK LI +D    + MHDL+
Sbjct: 424 DSLPETEMGIFLDIACFFKGEKWNYVKRILKASDISFKVLASKCLIMVDRNDCLEMHDLI 483

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           +DMGREIVR +S ++PG R+RLW H+D+ +VLKK++G+  IEGI L   K+         
Sbjct: 484 QDMGREIVRNQSPSNPGDRSRLWSHEDVLEVLKKDSGSITIEGIMLHPPKLEVVDKWTDT 543

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           AF KM  LR L     +N   ++    +P  +++ L+W   P ++       + +V  K+
Sbjct: 544 AFEKMKNLRILIV---RNTKFLTGPSSLP-NKLQLLDWIGFPSESFPPKFDPKNIVDFKL 599

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTP------ITF-EIIDCKMLERLPD--ELENLEYLTV 588
                           SSL + K P      +TF  +  C  + ++PD  E +NL  LT+
Sbjct: 600 S--------------HSSLVSIKPPQKVFQNLTFVNLSQCHFITKIPDMFEAKNLRVLTI 645

Query: 589 -KGTTIRELPESLGRLSWVKRLILSNNSNLER-IPE-SIRHLSKLTFLFISHCERLQTLP 645
            K   +     S G +  +  L  S  + L   +P+ ++ +L  L+F F   C +LQ  P
Sbjct: 646 DKCPKLEGFHPSAGHMPNLVYLSASECTMLTSFVPKMNLPYLEMLSFNF---CSKLQEFP 702

Query: 646 EL------PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLK 685
           E+      P  + +++    T++EK P  +  ++ + YV++  C  LK
Sbjct: 703 EVGGKMDKPLKIHMIN----TAIEKFPKSICKVTGLEYVDMTTCRELK 746



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 103/255 (40%), Gaps = 69/255 (27%)

Query: 473 EIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAE 530
           +IHM + A  K PK          + C V+ LE V     R L       K L+  +   
Sbjct: 713 KIHMINTAIEKFPK----------SICKVTGLEYVDMTTCREL-------KDLSSFVSLP 755

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG 590
           KLV+LKM         +   +L  S   F+   + E   C  L+ L        YL+   
Sbjct: 756 KLVTLKM---------NGCSQLAESFKMFRKSHS-EANSCPSLKAL--------YLSKAN 797

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
            +  +L   L     ++ L +S+N   E +P+ I+   +L  L +S C  L+ +PELP +
Sbjct: 798 LSHEDLSIILEIFPKLEYLNVSHNE-FESLPDCIKGSLQLKKLNLSFCRNLKEIPELPSS 856

Query: 651 LGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGI 710
           +  + AR C SL       +  SSVL              LS+I          Y+ER  
Sbjct: 857 IQRVDARYCQSLS------TKSSSVL--------------LSKI----------YKERE- 885

Query: 711 KKSMYFPGNEIPKWF 725
           K  +  P  EIPK F
Sbjct: 886 KIQVVMPETEIPKEF 900


>gi|147792369|emb|CAN74711.1| hypothetical protein VITISV_009242 [Vitis vinifera]
          Length = 1354

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 237/727 (32%), Positives = 354/727 (48%), Gaps = 91/727 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR NFT HL+  L+   I TF DD+ L +G +I+  LL  IE S I II
Sbjct: 19  YDVFLSFRGGDTRKNFTDHLYTTLTSYGIHTFKDDEELEKGGDIASDLLRAIEESTIFII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ YA SRW                      FY VDPS VR Q  SFG       +  
Sbjct: 79  IFSKNYAYSRWCLNELVKIIERKSQKESLVLPIFYHVDPSDVRNQKGSFGD----ANQEK 134

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E +++W+ AL +AA+L G   +  + E+++++EI N +++RL+    S  K +VG+   
Sbjct: 135 KEMVQKWRIALRKAANLCGCHVDD-QHETEVVKEIVNTIIRRLNHQPLSVGKNIVGISVH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E+++SL+      V  + I GIGG  K TIA A++N+IS  ++GS F  N+RE  + G 
Sbjct: 194 LEKLKSLMNTNLNKVSVVGICGIGGAGKTTIAKAIYNEISYQYDGSSFLKNIRERSK-GD 252

Query: 220 IKDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVT------------- 260
           I  LQ++LL  + K  N +  NI+  ++ + R     +V ++FDDV              
Sbjct: 253 ILQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKD 312

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
              + S +IIT+RDKQVL     +  Y + +L   +A ++F  WAF  +     +  L+ 
Sbjct: 313 WFEAKSTIIITSRDKQVLAQYGVDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVYKNLSY 372

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEE-VLKISYDSLDDSQK 376
             I YA G+PLALKVLG  L G++   WESA+ KL+ IPH+EI      I    LD  + 
Sbjct: 373 NIIDYANGLPLALKVLGGSLFGKTTSEWESALCKLKTIPHIEIHNGTQAIEGLFLDRCKF 432

Query: 377 N-VFLDIACFLEGEHRDEVISIFDASKSLINLD------LFYRIRMHDLLRDMGREIVRK 429
           N  +L+   F E  +R  ++ I    + L   D       F    +  L  D        
Sbjct: 433 NPSYLNRESFKE-MNRLRLLKIRSPRRKLFLEDHLPRDFAFSSYELTYLYWDGYPSEYLP 491

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA-FSKMPKLR 488
            + +       L    +I Q+ + N   E ++ I L  +     +H+     FS +P L 
Sbjct: 492 MNFHAKNLVELLLRTSNIKQLWRGNKLHEKLKVIDLSYS-----VHLIKIPDFSSVPNLE 546

Query: 489 FLRFYGDKNKCMVSHLEGVP--FAEVRHLEWPQCPLKTLNICA--EKLVSLKMPCTKVEQ 544
            L   G  N      LE +P    +++HL+       + N C+  E+   +K    K+  
Sbjct: 547 ILTLEGCVN------LELLPRGIYKLKHLQ-----TLSFNGCSKLERFPEIKGNMGKLRV 595

Query: 545 L---WDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRE--L 596
           L      +  LPSS+       T  + DC  L ++P     L +LE L +    I E  +
Sbjct: 596 LDLSGTAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCNIMEGGI 655

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           P  +  LS +++L L    +   IP +I  LS+L  L +SHC  L+ +PELP +L LL A
Sbjct: 656 PSDICHLSSLQKLNLE-GGHFSCIPATINQLSRLKALNLSHCNNLEQIPELPSSLRLLDA 714

Query: 657 R--NCTS 661
              NCTS
Sbjct: 715 HGSNCTS 721



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 124/289 (42%), Gaps = 55/289 (19%)

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA--- 510
           + GT+AIEG+ LD  K N   ++N  +F +M +LR L+    + K  +       FA   
Sbjct: 416 HNGTQAIEGLFLDRCKFNPS-YLNRESFKEMNRLRLLKIRSPRRKLFLEDHLPRDFAFSS 474

Query: 511 -EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD-------------------- 547
            E+ +L W   P + L  N  A+ LV L +  + ++QLW                     
Sbjct: 475 YELTYLYWDGYPSEYLPMNFHAKNLVELLLRTSNIKQLWRGNKLHEKLKVIDLSYSVHLI 534

Query: 548 --------------------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLE 584
                               +++ LP  +   K   T     C  LER P+    +  L 
Sbjct: 535 KIPDFSSVPNLEILTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLR 594

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-T 643
            L + GT I +LP S+  L+ ++ L+L + S L +IP  I HLS L  L + +C  ++  
Sbjct: 595 VLDLSGTAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCNIMEGG 654

Query: 644 LPELPCNLGLLSARNCTS--LEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
           +P   C+L  L   N        +PA ++ +S +  +NL  CN L+  P
Sbjct: 655 IPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIP 703



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 98/219 (44%), Gaps = 32/219 (14%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            ++  LPSS+  FK+        C  LE  P+   ++E+L  L + GT IRE+P S+ RL 
Sbjct: 959  NLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMESLIKLYLDGTAIREIPSSIQRLR 1018

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L LS   NL  +PESI +L+    L +S C     LP+   NLG L      SLE 
Sbjct: 1019 GLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD---NLGRLQ-----SLEH 1070

Query: 665  LPAG-LSSMSSVL--YVNLCNF--LKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN 719
            L  G L SM+  L     LC+   L L    L EI  + +   SL        ++Y  GN
Sbjct: 1071 LFIGYLDSMNFQLPSLSGLCSLRILMLQACNLREIPSEIYYLSSLV-------TLYLMGN 1123

Query: 720  E---IPKW------FRHQSMGSSATLKTRPPRPAGYNKL 749
                IP         +H  +     L+  P  P+G   L
Sbjct: 1124 HFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYL 1162



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 147/389 (37%), Gaps = 95/389 (24%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRL-----------------PSSLCTFKTPITFEIIDCKM 572
            E L+ L +  T + ++   +QRL                 P S+C   +  T  +  C  
Sbjct: 995  ESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPN 1054

Query: 573  LERLPDEL---ENLEYLTV------------------------KGTTIRELPESLGRLSW 605
              +LPD L   ++LE+L +                        +   +RE+P  +  LS 
Sbjct: 1055 FNKLPDNLGRLQSLEHLFIGYLDSMNFQLPSLSGLCSLRILMLQACNLREIPSEIYYLSS 1114

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L L  N +  RIP+ I  L  L    +SHC+ LQ +PELP  L  L A +CTSLE L
Sbjct: 1115 LVTLYLMGN-HFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYLDAHHCTSLENL 1173

Query: 666  PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFP-GNEIPKW 724
             +  S + S L+   C   ++   E+  IV+                  + P  N IP+W
Sbjct: 1174 SSQSSLLWSSLFK--CFKSQIQGVEVGAIVQ-----------------TFIPQSNGIPEW 1214

Query: 725  FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-----------FPAFLKYFRHKSGE 773
              HQ  G   T++  P      +  + F  C++ V           F   L  F H S  
Sbjct: 1215 ISHQKSGFQITMEL-PWSWYENDDFLGFVLCSLHVPFDTDTAKHRSFNCKLN-FDHDSAS 1272

Query: 774  DDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFSFR 833
               D   +   C+     +     W    I Y +S+                 Y    +R
Sbjct: 1273 FLLDVIRFKQSCECCYDEDESNQGWL---IYYSKSN-------------IPKKYHSNEWR 1316

Query: 834  -IHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             +  SF+       G+V++CG HF+YA D
Sbjct: 1317 TLKASFYGHSSNRPGKVERCGFHFLYAHD 1345


>gi|357471469|ref|XP_003606019.1| Resistance protein [Medicago truncatula]
 gi|357499467|ref|XP_003620022.1| Resistance protein [Medicago truncatula]
 gi|355495037|gb|AES76240.1| Resistance protein [Medicago truncatula]
 gi|355507074|gb|AES88216.1| Resistance protein [Medicago truncatula]
          Length = 822

 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 220/741 (29%), Positives = 358/741 (48%), Gaps = 123/741 (16%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ---LIRGDNISQSLLGTIEASCIAI 59
           DVFL  +G DTR  FT +L   L  K I+TF DD    L R D ++  +   IE S I I
Sbjct: 19  DVFLICKGTDTRYGFTGNLLKALIDKGIRTFHDDDDSDLQRRDKVTPII---IEESRILI 75

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            IFS  YASS                        F+ V+P+ VR  +  +G+  +    R
Sbjct: 76  PIFSANYASSSSCLDTLVHIIHCYKTKGCLVLPVFFGVEPTDVRHHTGRYGKALAEHENR 135

Query: 99  FP------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           F       E++++WK AL+ AA+L  +  +    E +LI +I   +  ++          
Sbjct: 136 FQNDTKNMERLQQWKVALSLAANLPSYHDDSHGYEYELIGKIVKYISNKISRQSLHVATY 195

Query: 153 LVGVECSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
            VG++  +++++SLL  G  +GV  + I+GIGG  K T+A A++N ++  FEG  F   V
Sbjct: 196 PVGLQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQV 255

Query: 212 REAEETGGIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVTS----- 261
           RE   +  +K  Q+ LLS+ L     + ++   ++    RL RKK+ ++ DDV +     
Sbjct: 256 RENSASNSLKRFQEMLLSKTLQLKIKLADVSEGISIIKERLCRKKILLILDDVDNMKQLN 315

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRDK +L      K Y +K L   +A +L    AF  D + +
Sbjct: 316 ALAGGVDWFGPGSRVIITTRDKHLLACHEIEKTYAVKGLNVTEALELLRWMAFKNDKVPS 375

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           S+ ++ ++ + YA G+P+ ++++G  L G++ E  ++ +   E IP+ EI+ +LK+SYDS
Sbjct: 376 SYEKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRILKVSYDS 435

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLIN-LDLFYRIRM 415
           L++ +++VFLDIAC  +G   ++V  I  A               K LI+  +    + +
Sbjct: 436 LEEEEQSVFLDIACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSL 495

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H+L+ +MG+E+VR ES   PGKR+RLW  KDI++VL++NTGT  IE I ++++ +   I 
Sbjct: 496 HNLIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMNLHSMESVID 555

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
            N  AF KM     L+ +  +N   +  L+ +P +           L+ +  C       
Sbjct: 556 KNGKAFKKMTH---LKTFITENGYHIQSLKYLPRS-----------LRVMKGC------- 594

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
                        + R PSS                    L  +LEN++ L         
Sbjct: 595 -------------ILRSPSS------------------SSLNKKLENMKVLIFDNCQDLI 623

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC-NLGLL 654
               +  L  +++   +   NL  I  S+R+L++L  L    CE+L++ P L   +L  L
Sbjct: 624 YTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPLQSPSLQNL 683

Query: 655 SARNCTSLEKLPAGLSSMSSV 675
              NC SL+  P  L  M+++
Sbjct: 684 ELSNCKSLKSFPELLCKMTNI 704


>gi|224144405|ref|XP_002325279.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862154|gb|EEE99660.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 534

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 186/515 (36%), Positives = 275/515 (53%), Gaps = 65/515 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  F  HL+  L+   I TF  DD+L RG+ IS +L   I  S I+++
Sbjct: 10  YDVFLSFRGEDTRKQFIDHLYVALAHAGIHTFRDDDELSRGEEISPALSYAIRESKISLV 69

Query: 61  IFSERYASSRW--------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           +FS+ YASSRW                     FY +DPS VRKQ+ S+   F+R  +RF 
Sbjct: 70  VFSKNYASSRWCLDELVTILERRKMGQIVVPVFYDIDPSDVRKQTGSYADAFARHGERFN 129

Query: 100 --PEKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
              +++ +W+ ALTEAA+LSG+    I    ES+LI  I  D+L +L   +       VG
Sbjct: 130 GETDRVIKWRGALTEAANLSGWSLKDIANGYESELIRRIVGDILVKLSHNYFHFPNQTVG 189

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++  +E+I   L + +E V  + + G+ G  K T+A AVFNK+   F    F  NV+E +
Sbjct: 190 IDSRVEDIIKSLTVVTEDVRIVGLHGMSGCGKTTLAKAVFNKLYHGFGKRCFLFNVKEMS 249

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIES---QLN----RLARKKVRIVFDDVTS------ 261
           ++  G   LQ++ L  + K G  + I+     +N    RL  ++V  V DDV        
Sbjct: 250 QQPNGRVRLQEEFLRRVFKLGEFKQIDDVDKGMNMIKERLWDQRVLAVLDDVDQPEQLHE 309

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS VIITT ++ +L     N KYR+ +L +A++ +LF + AF        
Sbjct: 310 LVEVRSWFGPGSIVIITTGNEHLLTQLEVNVKYRVAKLSHAESLELFSRHAFRDTQPIED 369

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +  L++  + Y  G PLAL++LG +L  R K  WES +  L+ I   +I++ L+IS+++L
Sbjct: 370 YAMLSNDVLSYCGGHPLALELLGSFLFKREKPEWESLIDSLKKITPDQIQQKLRISFEAL 429

Query: 372 DDSQ-KNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMH 416
                K++FLDIACF  G  ++ V +I DA               +S I +D    I ++
Sbjct: 430 GGGPVKSIFLDIACFFVGRDKEYVKTILDARYGFNTEIAIKNLIERSFITIDSKKEINLN 489

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
           +LLRDMGREI R+ S +HPG R+R+  H D   VL
Sbjct: 490 NLLRDMGREINREMSPDHPGNRSRICFHDDALDVL 524


>gi|51969820|dbj|BAD43602.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|51970068|dbj|BAD43726.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
          Length = 543

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 194/527 (36%), Positives = 273/527 (51%), Gaps = 78/527 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVFLSFRG DTR+NFT HL   L L+ I +FIDD+L RGDN++ +L   IE S IAII+
Sbjct: 11  FDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLT-ALFDRIEKSKIAIIV 69

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  YA+S W                      FY+VD S V KQ +SF   F      FP
Sbjct: 70  FSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPFKLPELTFP 129

Query: 101 ----EKMKRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
               E++  WK AL  A+++ G+    I   E+KL++EIA D  K+L+    S N+GLVG
Sbjct: 130 GVTPEEISSWKAALASASNILGYVVKEISTSEAKLVDEIAVDTFKKLNDLAPSGNEGLVG 189

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  ++ +E LL     + V  + I G+ GI K T+A  ++ ++   F+GS F  N+RE 
Sbjct: 190 IESRLKNLEKLLSWEDLDTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIREN 249

Query: 215 EETGGIKDLQKKLLSELSKDGNMR-----NIESQLNR-LARKKVRIVFDDVT-------- 260
               G++ L +KL S +  D ++      N   +  R L  K++ IV DDV         
Sbjct: 250 SGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYL 309

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRD ++++     +KY + +L   +A KLF   AF         
Sbjct: 310 MGHCKWYQGGSRIIITTRDSKLIETI-KGRKYVLPKLNDREALKLFSLNAFSNSFPLKEF 368

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             LT+  + YA+G PLALKVLG  LC R    WE+ + +L+   H +I EVL+ SY+ L 
Sbjct: 369 EGLTNMVLDYAKGHPLALKVLGSDLCERDDLYWEAKLDRLKSRSHGDIYEVLETSYEELT 428

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
             QKNVFLDIACF   E+ D V S+ ++              K LI L    RI MHD+L
Sbjct: 429 TEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSGVVKDLVDKCLITLS-DNRIEMHDML 487

Query: 420 RDMGREI-VRKESI------------NHPGKRNRLWHHKDIYQVLKK 453
           + M +EI ++ E+I            N      RLW  +DI  +L +
Sbjct: 488 QTMAKEISLKVETIGIRDCRWLSRHGNQCQWHIRLWDSEDICDLLTE 534


>gi|215261578|gb|ACJ64858.1| disease resistance protein RPP1-like protein R4 [Arabidopsis
           thaliana]
          Length = 1363

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 244/830 (29%), Positives = 389/830 (46%), Gaps = 145/830 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I TFID+ + RG +I   L   I+ S IAI++
Sbjct: 152 HDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERGKSIGPELKEAIKGSKIAIVL 211

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S +YASS W                      FY VDP+ V+KQ+  FG+ F++  R + 
Sbjct: 212 LSRKYASSSWCLDELAEIMICREVLGQIVMTIFYEVDPTDVKKQTGEFGKAFTKTCRGKP 271

Query: 100 PEKMKRWKNALTEAADLSG-------------------------------FDSNVIRPES 128
            E+++RW+ AL + A ++G                                 SNV R E+
Sbjct: 272 KEQVERWRKALEDVATIAGEHSRNCKYQNKKILFVHNFMTILSQQLYIDLVYSNVRRNEA 331

Query: 129 KLIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISK 187
            +IE+IA DV   L++   S++  GLVG+   ++++E LL +  + V  + IWG  GI K
Sbjct: 332 DMIEKIATDVSNMLNSCTPSRDFDGLVGMRAHMDKMEHLLRLDLDEVRMIGIWGTPGIGK 391

Query: 188 ITIAGAVFNKISRHFEGSYFALNVREA------EETGGIKDLQKKLLSEL--SKDGNMRN 239
            TIA  +F++ S  F  +    ++RE        E      LQ ++LS++   KD  + +
Sbjct: 392 TTIAACMFDRFSSRFPFAAIMTDIRECYPRLCLNERNAQLKLQDQMLSQIFNQKDIKISH 451

Query: 240 IESQLNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKK 283
           +     RL  KKV IV D+V                  GSR+IITT D+ +LK    N  
Sbjct: 452 LGVAQERLKDKKVFIVLDEVDHLGQLDALAKETRWFGPGSRIIITTEDQGILKAHGINHV 511

Query: 284 YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
           Y+++     +A ++FC  AFG         +L  +    A  +PL LKVLG  L G SK 
Sbjct: 512 YKVEYPSNDEAFQIFCMNAFGQKQPCEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKP 571

Query: 344 VWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD---- 399
            WE  + +L+     +I  V++ SYD+L D  K +FL IAC    E   +V  +      
Sbjct: 572 EWERTLPRLKTSLDGKIGSVIQFSYDALCDEDKYLFLYIACLFNDESTTKVKELLGKFLD 631

Query: 400 --------ASKSLINLDLFY--RIRMHDLLRDMGREIVRKESINHPGKRNRLW-HHKDIY 448
                   A KSLI+   FY  RI MH LL   GRE   K+ ++H  ++++L    +DI 
Sbjct: 632 VRQGLHVLAQKSLIS---FYGERIHMHTLLEQFGRETSCKQFVHHGYRKHQLLVGERDIC 688

Query: 449 QVLKKN-TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF-----------YGDK 496
           +VL  + T      GI+LD+ K   E++++  A  ++   +F++              DK
Sbjct: 689 EVLDDDTTDNRRFIGINLDLYKNEEELNISEKALERIHDFQFVKINLRQKLLHFVKINDK 748

Query: 497 NKCM----------VSH----------LEGVPF--AEVRHLEWPQCPLKTL--NICAEKL 532
           N             + H          L+ + +    +R L+W      +L      E L
Sbjct: 749 NHAQKESQRLQSLNIYHRINSIHQPERLQDLIYQSPRIRSLKWYSYQNMSLPCTFNPEFL 808

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-T 591
           V L M  +K+ +LW+  ++L +     K     + ID K L  L     NLE L ++  +
Sbjct: 809 VELDMSSSKLRKLWEGTKQLRN----LKWMDLSDSIDLKELPNLSTA-TNLEELELRNCS 863

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP--ELPC 649
           ++ ELP S+ +L+ ++RL L + S+L ++P SI + + L  L + +C R+  LP  E   
Sbjct: 864 SLMELPSSIEKLTSLQRLDLCDCSSLVKLPPSI-NANNLWELSLINCSRVVELPAIENAT 922

Query: 650 NLGLLSARNCTSLEKLPAGLSSMSSV----LYVNLCNFLKLDPNELSEIV 695
           NL  L+ +NC+SL +LP  + +  ++    L ++ C+ L   P+ + ++ 
Sbjct: 923 NLWELNLQNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMT 972



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 58/263 (22%)

Query: 539  CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPE 598
            C+K+E L       P+++   K+  T ++ DC  L+  P+   N+  L +KGT I+E+P 
Sbjct: 1006 CSKLEAL-------PTNI-NLKSLYTLDLTDCSQLKSFPEISTNISELWLKGTAIKEVPL 1057

Query: 599  SLGRLSW-----------------------VKRLILSNNSNLERIPESIRHLSKLTFLFI 635
            S+  +SW                       +  L LS  S+++ +P  ++ +S+L  L +
Sbjct: 1058 SI--MSWSPLVDFQISYFESLKEFPHALDIITGLWLSK-SDIQEVPPWVKRMSRLRELTL 1114

Query: 636  SHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
            ++C  L +LP+LP +L  L A NC SLE+L    ++    LY   C        +L++  
Sbjct: 1115 NNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEISLYFPKC-------FKLNQEA 1167

Query: 696  KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTR-PPRPAGYNKLISFA 753
            +D  M  S       ++ +  PG ++P  F H++  G S  +K +  P P      + F 
Sbjct: 1168 RDLIMHTS------TRQCVMLPGTQVPACFNHRATSGDSLKIKLKESPLPTT----LRFK 1217

Query: 754  FCAVVVFPAFLKYFRHKSGEDDW 776
             C ++V     K      G D W
Sbjct: 1218 ACIMLV-----KVNEKLMGYDQW 1235



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 9/99 (9%)

Query: 583  LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            L+ L + G +++ +LP S+G ++ ++   LSN SNL  +P SI +L  L  L +  C +L
Sbjct: 950  LKELNISGCSSLVKLPSSIGDMTNLEEFDLSNCSNLVELPSSIGNLQNLCELIMRGCSKL 1009

Query: 642  QTLPELPCNLGL-----LSARNCTSLEKLPAGLSSMSSV 675
            +    LP N+ L     L   +C+ L+  P   +++S +
Sbjct: 1010 EA---LPTNINLKSLYTLDLTDCSQLKSFPEISTNISEL 1045


>gi|10177430|dbj|BAB10522.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1055

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 224/735 (30%), Positives = 346/735 (47%), Gaps = 101/735 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHLH+    K I  F D ++ RG  I   L+  I  S ++I++
Sbjct: 12  YHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKDQEIERGHTIGPELIQAIRESRVSIVV 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            SE+YASS W                      FY+VDPS VRKQ   FG  F +  +   
Sbjct: 72  LSEKYASSGWCLDELVEILKCKEASGHAVMTIFYKVDPSSVRKQWGDFGSTFKKTCEGKT 131

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E++K RW  AL   A ++G  S     E+++I++IA DV  +L+ T     +G+      
Sbjct: 132 EEVKQRWSKALAYIATVAGEHSLNWDNEAEMIQKIAIDVSNKLNVTPSRDFEGMC----- 186

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
                       + V  + IWG  GI K TIA A+FN++   F  S F  N+        
Sbjct: 187 ------------DDVKMIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNIDVNNYDSK 234

Query: 220 IKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------------- 261
           ++ L   LLS++   KD  + ++ +    L  ++V IV DDV                  
Sbjct: 235 LR-LHNMLLSKILNQKDMKIHHLGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGP 293

Query: 262 GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIK 321
           GSRVI+T +DK++L     N  Y +       A ++FC  AF          EL  K ++
Sbjct: 294 GSRVIVTLKDKKILMAHGINDIYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVE 353

Query: 322 YAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLD 381
               +PLAL+V+G    G S++ W   +  +E     +IE VL++ YD L +  +++FL 
Sbjct: 354 LCGNLPLALRVVGSSFYGESEDEWRLQLYGIETNLDRKIEHVLRVGYDKLLEKHQSLFLH 413

Query: 382 IACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIVR 428
           IACF   E  D V ++               A+KSL+++     +RMH LL+ +GR++V 
Sbjct: 414 IACFFNHESVDYVSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVV 473

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           ++S   PGKR  L   K+I  VL   T           M+K+  E  +    F  M  L+
Sbjct: 474 QQS-GEPGKRQFLVEAKEIRDVLANET-----------MSKIG-EFSIRKRVFEGMHNLK 520

Query: 489 FLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLW 546
           FL+FY + N  ++  ++ +P   +R L W   P K L +    E LV L +  +K+E+LW
Sbjct: 521 FLKFY-NGNVSLLEDMKYLP--RLRLLHWDSYPRKRLPLTFQPECLVELYLVSSKLEKLW 577

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRL 603
             +Q L     T    I  E      L+ +P+  +  NLE L + G  ++ E+P S+  L
Sbjct: 578 GGIQPL-----TNLKKINLEY--SSNLKEIPNLSKATNLETLRLTGCESLMEIPSSISNL 630

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE 663
             ++ L  S  S L  IP  I +LS L  + +  C RL++ P++  N+ +LS R  T ++
Sbjct: 631 HKLEVLDASGCSKLHVIPTKI-NLSSLKMVGMDDCSRLRSFPDISTNIKILSIRG-TKIK 688

Query: 664 KLPAGLSSMSSVLYV 678
           + PA +     +L +
Sbjct: 689 EFPASIVGGLGILLI 703


>gi|357505215|ref|XP_003622896.1| TMV resistance protein N [Medicago truncatula]
 gi|355497911|gb|AES79114.1| TMV resistance protein N [Medicago truncatula]
          Length = 1197

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 192/511 (37%), Positives = 270/511 (52%), Gaps = 58/511 (11%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAI 59
           +YDVFLSFRG D R  F SHL+  L    I  F D D++ RGD IS SLL  IE   I+I
Sbjct: 343 VYDVFLSFRGIDCRAKFISHLYTSLQNAGIHVFKDNDEIQRGDQISFSLLKAIEECRISI 402

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           ++ S  YA+SRW                      FY VDPS VR Q+  FG  F +L  R
Sbjct: 403 VVLSSNYANSRWCMSELDNIMKVSRREGRMVIPVFYEVDPSEVRHQTGMFGDGFEKLISR 462

Query: 99  FP----EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            P     KM  WK AL E    +G      R ES+ I ++   V K LD T        V
Sbjct: 463 IPVDKYTKMN-WKTALLEVGSTAGVVILNSRNESEDIRKVVAHVTKLLDRTELFVADHPV 521

Query: 155 GVECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           GV+  ++++  LL C  S+    L IWG+GGI K TIA A +NKI   F+   F LNVRE
Sbjct: 522 GVDSRVQDVVQLLNCHESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFDAKSFLLNVRE 581

Query: 214 A-EETGGIKDLQKKLLSELSKDG--NMRNIESQ----LNRLARKKVRIVFDDVT------ 260
             E   G   LQ++LLS++ K     +R +ES       RL +KK+ +V DDV       
Sbjct: 582 DWEHDNGQVSLQQRLLSDIYKTTEIKIRTLESGKMILKERLQKKKIFLVLDDVNKEDQLN 641

Query: 261 ----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSR+IITTRD  +L     +  YRMKE+   ++ +LF   AF   +   
Sbjct: 642 ALCGSHEWFGEGSRIIITTRDDDLLSRLKVHYVYRMKEMDDNESLELFSWHAFKQPNPIK 701

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCG-RSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
               L+   +KY+ G+PLAL+V+G +L   R K+ W S + KL++IP+ ++ E L++S+D
Sbjct: 702 GFGNLSTDVVKYSGGLPLALQVIGSFLLTRRRKKEWTSLLEKLKLIPNDKVLEKLQLSFD 761

Query: 370 SL-DDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVR 428
            L DD  K +FLDIA F  G +++EV +I +      ++ +   ++     ++MGR IVR
Sbjct: 762 GLSDDDMKEIFLDIAFFFIGMNQEEVTTILEHCGHHPDIGISVLVQ-----QNMGRVIVR 816

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEA 459
           K+S     + +RLW +KD++ VL K+T  E+
Sbjct: 817 KKSREGGKEPSRLWRYKDVHYVLSKDTLLES 847



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 161/320 (50%), Gaps = 51/320 (15%)

Query: 154 VGVECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VGVE  ++E+  LL    SE    + I G GGI K TIA AV+NKI  HFE   F LNVR
Sbjct: 19  VGVESRVQEVIQLLNTEPSEETRVIGICGTGGIGKTTIAKAVYNKIHHHFEAKSFLLNVR 78

Query: 213 EA-EETGGIKDLQKKLLSELSKDGNMRNIESQ-------LNRLARKKVRIVFDDVT---- 260
           +  E+  G   LQ++LLS++ K  +++ IE+           L +K++ +V D+V     
Sbjct: 79  QVWEQDNGEVSLQQQLLSDIYKTTDIKKIETVESGKMILQEMLPQKRMLLVVDNVNEQHQ 138

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                        GS +IITTR   +L      + Y+M+ +   ++ +LF  +AF   + 
Sbjct: 139 LDALCISCKWFGQGSIIIITTRHSYML----YYRVYKMEPMNIHESLELFSLYAFKQPNP 194

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCY-LCGRSKEVWESAMRKLEII------PHVEIE 361
                +L+ + +    G+PL+L+V+G + L  R K  W S + KL+ I       H  ++
Sbjct: 195 IEDFADLSREVVMNCHGLPLSLEVIGSFLLTTRRKTEWNSVLEKLQQINRMYHLSHARVQ 254

Query: 362 EVLKISYDSLDDSQ-KNVFLDIACFLEGEHRDEVISIFDAS--------------KSLIN 406
           E+++IS+  L D   +N+FLDIA  L G  +D+VI I   S              + L+ 
Sbjct: 255 EIIRISFHGLRDGDVENMFLDIALNLCGMDQDDVIKILKDSVYYSAEIRIRVLLQRRLVT 314

Query: 407 LDLFYRIRMHDLLRDMGREI 426
           +D   RI M+  ++  GR+I
Sbjct: 315 VDSKNRICMYGPVQHFGRDI 334


>gi|9954759|gb|AAG09110.1|AC009323_21 Putative disease resistance protein - partial protein [Arabidopsis
           thaliana]
          Length = 889

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 245/900 (27%), Positives = 401/900 (44%), Gaps = 178/900 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VF SF G D R  F SHL        I  F D+ + R   I+ +L   I  S IAI++
Sbjct: 13  YNVFTSFHGPDVRIKFLSHLRQQFIYNGITMFDDNGIERSQIIAPALKKAIGESRIAILL 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPS VR Q+  FG  F      + 
Sbjct: 73  LSKNYASSSWSLDELLEILKCKEDIGQIVMTVFYEVDPSDVRNQTGDFGIAFKETCAHKT 132

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  ALT   +++G D      E+K+IE+IA DV   L+ T      G+VG+   
Sbjct: 133 EEERQKWTQALTYVGNIAGEDFKHWPNEAKMIEKIARDVSDILNVTPCRDFDGMVGLNDH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG- 218
           + E+ESLL + ++GV  + I G  GI K TIA A+  ++S  F+ + F  N+RE+ + G 
Sbjct: 193 LREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVDNLRESYKIGL 252

Query: 219 -----GIKDLQKKLLSELSKD----GNMRNIESQLNRLARKKVRIVFDDVT--------- 260
                 +   Q+ L   L++D    G++  ++ +L+ L   +V I+ DDV          
Sbjct: 253 DEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDL---RVLIILDDVEHLYQLEALA 309

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVI+TT ++++L        Y +      +A  +FC  AF         ++
Sbjct: 310 DIRWFGPGSRVIVTTENREILLQHGIKDIYHVGFPSEGEALMIFCLSAFRQPSPPYGFLK 369

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           LT +       +PL L VLG  L G+S+  W   + +L+      IE VLK+ Y+SL + 
Sbjct: 370 LTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCLDGRIESVLKVGYESLYEK 429

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLINLDLFY----RIRMH 416
            + +FL IA +   ++ D V S+ +              A++ LI +D+ +    R+ M+
Sbjct: 430 DQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANRCLIQIDIDHNRKSRVVMN 489

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
            LL+ M RE++ K+ I+   KR  L   +DI  VL++  G  +  G+SLD+ ++ +E+ +
Sbjct: 490 RLLQVMAREVISKQKIS---KRKILEDPQDICYVLEEAKGKGSALGLSLDVAEI-KELVI 545

Query: 477 NSYAFSKMPKLRFLRFYGDKN----KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
           N  AF KM  L  L+ +   +    K  V     +P + +R L W   P K+     E L
Sbjct: 546 NKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELP-SSIRLLHWEAYPRKSFRFGPENL 604

Query: 533 VSLKMPCTKVEQLWDDVQRL---------------------------------------- 552
           V+L M  +++E+LW   Q L                                        
Sbjct: 605 VTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNALVEI 664

Query: 553 PSSLCTFKTPITFEIIDCKMLERL-----------------------PDELENLEYLTVK 589
           PSS+      +   +  C+ LE +                       PD   +LE L ++
Sbjct: 665 PSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTSLEELVIE 724

Query: 590 GTTIRELPESLGRLSWVKRLILSNNSNL---------------------ERIPESIRHLS 628
            T ++ELP S    + V  L + +N NL                     E + +SI+ L 
Sbjct: 725 KTGVQELPASFRHCTGVTTLYICSNRNLKTFSTHLPMGLRKLDLSNCGIEWVTDSIKDLH 784

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            L +L +S C+RL +LPELPC+L  L A +CTSLE++   L+  ++       NF+K   
Sbjct: 785 NLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQF-----NFIKC-- 837

Query: 689 NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK 748
                   D   + ++ ++  +  ++  P  E+ +   +++ G+  T+      P+ +N+
Sbjct: 838 -----FTLDREARRAIIQQSFVHGNVILPAREVLEEVDYRARGNCLTIP-----PSAFNR 887


>gi|227438217|gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 213/709 (30%), Positives = 336/709 (47%), Gaps = 118/709 (16%)

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
            E + RW+ AL E  ++SG+DS     E+ L++E+  D+  RL +   S  +GLVG+   +
Sbjct: 1524 ETVGRWRKALAEVGNISGWDSKTRSEEAVLVQEVVRDLSNRLFSQPSSDAEGLVGIMPHL 1583

Query: 161  EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
              +ESLL + S  V  + IWG+GGI K TIA  V  ++S  F+G  F  N +   E  G 
Sbjct: 1584 RSVESLLSMDSGDVRMVGIWGMGGIGKSTIAKFVCKRLSSKFDGVCFLENAKTEFEQYGS 1643

Query: 221  KDLQKKLLSEL--SKDGNMRNIESQL--NRLARKKVRIVFDDVTS--------------- 261
              +++K+L E+   KD N  + +S +   RL  K + +V D+V S               
Sbjct: 1644 SHMRQKVLREILRRKDLNSWDGDSGVMRQRLRGKSILLVIDNVDSVEQLQELVGSLEWFG 1703

Query: 262  -GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
             GSR++ITTRDK+VL+       Y +K L    A  LF + AF          EL+   +
Sbjct: 1704 PGSRIVITTRDKRVLEQHDVEYIYEVKPLKTTQALMLFSKHAFKQPRPPKDSAELSIDIV 1763

Query: 321  KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
            K   G+PLA++V G  L  R    WE  +  L    +  + + L+ S+++L++ +K +FL
Sbjct: 1764 KQLDGLPLAIRVAGAALYRRDIADWEYYLDLLRTNVNSSVSKALRESFEALNNQEKLIFL 1823

Query: 381  DIACFLEGEHRDEVISIFD-------------------ASKSLINLDLFYRIRMHDLLRD 421
             +AC   G+H   V  + D                     K LI++    R+ +HD+L+D
Sbjct: 1824 YVACCFNGKHMHGVSRVLDLFIVSGHMPFRSTLCIRTLKEKCLISISTTQRLWVHDVLQD 1883

Query: 422  MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA--IEGISLDMNKVNREIHMNSY 479
            M R I+ +    +P KR  LW+  DI  VL +N G+EA  +E + LDM K  +E+ ++  
Sbjct: 1884 MARSIICEGKEENPWKRKILWNFMDINNVLCENMGSEAVEVESLLLDMPK-GKELCISPA 1942

Query: 480  AFSKMPKLRFLRFY-----GDKNK-CMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEK 531
             F +M  L+ L+FY     G+ +K CM   L  +P   +R+L W    LK+L    C   
Sbjct: 1943 IFERMYNLKLLKFYNNSTGGESSKICMPGGLVYLPM--LRYLHWQAYSLKSLPSRFCTTY 2000

Query: 532  LVSLKMPCTKVEQLWDDVQRL----------------------PSSL-------CTFKTP 562
            LV L +P + VE LW+  Q L                       +SL       C     
Sbjct: 2001 LVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPNLSKATSLEKLNLDNCESLVD 2060

Query: 563  IT-----------FEIIDCKMLERLPDEL-----------------------ENLEYLTV 588
            +T            E+  CK L+ LP+ +                       EN+  +T+
Sbjct: 2061 LTDSVRHLNNLGVLELSGCKKLKNLPNNINLRLLRTLHLEGCSSLEDFPFLSENVRKITL 2120

Query: 589  KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
              T I E+P S+ RLS +K L LS    L+ +P +IR++  LT L++S+C  +   PE+ 
Sbjct: 2121 DETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLWLSNCPNITLFPEVG 2180

Query: 649  CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
             N+  L+ +  T++E++PA +   S + Y+N+  C  LK  P  L  + 
Sbjct: 2181 DNIESLALKG-TAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPTLKNLT 2228



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 13/176 (7%)

Query: 502  SHLEGVPF--AEVRHLEWPQCPLKTLNICAEKLVSLKM----PCTKVEQLWDDVQRLPSS 555
            S LE  PF    VR +   +  ++ +    E+L  LK      C K++ L       P +
Sbjct: 2103 SSLEDFPFLSENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNL-------PRT 2155

Query: 556  LCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNS 615
            +    +  T  + +C  +   P+  +N+E L +KGT I E+P ++G  S +  L +S   
Sbjct: 2156 IRNIDSLTTLWLSNCPNITLFPEVGDNIESLALKGTAIEEVPATIGDKSRLCYLNMSGCQ 2215

Query: 616  NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
             L+ +P ++++L+ L FL +  C  +   PE  C L  L     + +E+    + S
Sbjct: 2216 RLKNLPPTLKNLTNLKFLLLRGCTNITERPETACRLKALDLNGTSIMEETSGSVQS 2271


>gi|359806248|ref|NP_001241468.1| TMV resistance protein N-like [Glycine max]
 gi|223452617|gb|ACM89635.1| disease-resistance protein [Glycine max]
          Length = 563

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 180/517 (34%), Positives = 273/517 (52%), Gaps = 66/517 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+ F  HL+  L  K I  F DD+ L +G++IS  LL  I+ S ++II
Sbjct: 44  YDVFISFRGPDTRNTFVDHLYAHLLRKGIFVFKDDKKLQKGESISAQLLQAIQDSRLSII 103

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS++YASS W                      FY VDPSHVR Q+ ++   F   R RF
Sbjct: 104 VFSKQYASSTWCLDEMAAIADCKQQSNQTVFPVFYDVDPSHVRHQNGAYEVAFVSHRSRF 163

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              P+K+ RW  A+T+ A+ +G+D  + +PE + IE I  +V+K L   F      L+G+
Sbjct: 164 REDPDKVDRWARAMTDLANSAGWDV-MNKPEFREIENIVQEVIKTLGHKFSGFVDDLIGI 222

Query: 157 ECSIEEIESLLCIGS--EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +  ++E+E  L + S  + V  L I G+GGI K T A  ++++IS  F+   F  NV + 
Sbjct: 223 QSRVQELEGSLKLSSNNDNVRVLGICGMGGIGKTTQAVVLYDRISYKFDACCFVENVNKI 282

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQL-------NRLARKKVRIVFDDVTS------ 261
              GG   +QK+++ +   + N+  I S         NRL   KV I  D+V        
Sbjct: 283 YRDGGATAIQKQIVRQTLDEKNLE-IYSPFEISGIVRNRLHNIKVLIFLDNVDQIEQLQE 341

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+II TRD+ +LK   A+  +++  +   DA KLF   AF  +   +S
Sbjct: 342 LAINPNFLFEGSRMIIITRDEHILKVYGAHVIHKVSLMNDNDARKLFYSKAFKSEDQSSS 401

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            +EL  + +KY Q +PLA+KV+G +LC R+   W+ A+ + +  P   I +VL+IS D L
Sbjct: 402 CVELIPEVLKYVQCLPLAIKVIGSFLCTRNATQWKDALDRFQNSPDNGIMDVLQISIDGL 461

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
              +K +FL IACF + E  D    I +               KSLI L     I MHD+
Sbjct: 462 QYEEKEIFLHIACFFKEEMEDYAKRILNCCGLHTHIGIPRLIEKSLITLRD-QEIHMHDM 520

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           L+++G++IVR +    PG  +R+W ++D ++V+   T
Sbjct: 521 LQELGKKIVRNQFPEQPGSWSRIWLYEDFFRVMTTQT 557


>gi|297815586|ref|XP_002875676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321514|gb|EFH51935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1058

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 243/791 (30%), Positives = 371/791 (46%), Gaps = 118/791 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R    SH+      K I TFID+ + R   I   L   I+ S IAI++
Sbjct: 53  HDVFPSFHGADVRRTLLSHIMESFRRKGIDTFIDNNIERSKPIGPELKEAIKGSKIAIVL 112

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S+ YASS W                      FY VDP+ ++KQ+  FG+ F +  K + 
Sbjct: 113 LSKNYASSSWCLDELAEIMKCREVLGQIVMTIFYEVDPTDIKKQTGDFGKAFRKTCKGKT 172

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E ++RW+ AL + A ++G  S     E+++IE+I+ DV   L+ +  S +    VG+  
Sbjct: 173 KEHIERWRKALKDVAIIAGEHSRNWSNEAEMIEKISIDVSNMLNLSIPSSDFDDFVGITA 232

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            +E +E  L +  + V  + IWG  GI K TIA  +F++ S  F  +    ++RE     
Sbjct: 233 HMERMEKYLSLDLDEVRMIGIWGPPGIGKTTIATCMFDRFSSRFPLAAIMADIRECYPRL 292

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT---------- 260
             +E      LQK++LS +   KD  + ++     RL  KKV +V D+V           
Sbjct: 293 CLDERNAQLKLQKQMLSLIFNQKDIMISHLGVAQERLKDKKVLLVLDEVDHSGQLDALAK 352

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         +
Sbjct: 353 EIQWFGPGSRIIITTEDLGVLKARGINHVYKVDFPSNDEAFQIFCMNAFGQKQPYEGFRK 412

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  + +  A  +PL LKVLG  L G SK  WE A+ +L+     +I  +++ SYD+L D 
Sbjct: 413 LALEVMALAGELPLGLKVLGSALRGMSKPDWERALPRLKTSLDGKIGSIIQFSYDALCDE 472

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD------------ASKSLINLDLFYRIRMHDLLRDM 422
            K +FL IAC    E   +V  +              A KSLI++D    I+MH LL   
Sbjct: 473 DKYLFLYIACLFIYESTTKVKELLGKFLDVRQGLYVLAQKSLISID-GETIKMHTLLEQF 531

Query: 423 GREIVRKESINHP-GKRNRLWHHKDIYQVLKKN-TGTEAIEGISLDMNKVNREIHMNSYA 480
           GRE  RK+ + H   KR  L   +DI +VL+ + T +    GI+LD++K   E++++  A
Sbjct: 532 GRETSRKQFVRHGFTKRQLLVGERDICEVLEDDTTDSRRFIGINLDLSKTEEELNISEKA 591

Query: 481 FSKMPKLRFLRFYGDKNKC----MVSHLEGVPF--AEVRHLEWPQ----CPLKTLNICAE 530
             +M   +F+R   DKN+     + S LEG+ +   ++R L+W      C   T N   E
Sbjct: 592 LERMHDFQFVRI-KDKNRAQTERLQSVLEGLIYHSQKIRLLDWSYFQDICLPSTFN--PE 648

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPS-------------SLCTFKTPITFEII---DCKMLE 574
            LV L +  +K+++LW+  ++L +              L    T    E +   +C  L 
Sbjct: 649 FLVELTLKYSKLQKLWEGTKKLKNLKWMDLGGSEDLKELPDLSTATNLEEVNLRNCSSLV 708

Query: 575 RLPDELEN---LEYL------TVKGTTIR-----------ELPESLGRLSWVKRLILSNN 614
            LP  + N   LE L      ++  T +R           ELP S+G    ++RL L N 
Sbjct: 709 ELPSSIGNATKLELLNLDDCSSLNATNLREFDLTDCSNLVELP-SIGDAIKLERLCLDNC 767

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSM 672
           SNL ++  SI + + L    +S C  L  LP++    NL  L  +NC+   K+P  + S 
Sbjct: 768 SNLVKLFSSI-NATNLHKFSLSDCSSLVELPDIENATNLKELILQNCS---KVPLSIMSW 823

Query: 673 SSVLYVNLCNF 683
           S  L   +  F
Sbjct: 824 SRPLKFRMSYF 834



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 34/208 (16%)

Query: 565 FEIIDCKMLERLPD--ELENLEYLTVKGTTIRELPESLGRLSWVKRLI--LSNNSNLERI 620
           F + DC  L  LPD     NL+ L ++  +  ++P S+  +SW + L   +S   +L+  
Sbjct: 785 FSLSDCSSLVELPDIENATNLKELILQNCS--KVPLSI--MSWSRPLKFRMSYFESLKEF 840

Query: 621 P-------ESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
           P       E +  +S+L  L + +C  L +LP+L  +L  + A NC SLE+L    ++  
Sbjct: 841 PHAFNIITELVLGMSRLRRLRLYNCNNLISLPQLSNSLSWIDANNCKSLERLDCSFNNPK 900

Query: 674 SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ--SMG 731
             L+    N  KL+      I+     ++++            PG ++P  F H+  + G
Sbjct: 901 ICLH--FANCFKLNQEARDLIIHTSTSRYAI-----------LPGAQVPACFNHRPTAEG 947

Query: 732 SSATLKTRPPRPAGYNKLISFAFCAVVV 759
           S     T+ P     +  + F  C ++V
Sbjct: 948 SLKIKLTKSP----LSTFLRFKACIMLV 971


>gi|359495256|ref|XP_002272078.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1130

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 237/752 (31%), Positives = 356/752 (47%), Gaps = 123/752 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQL-IRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDT   FT HL+  L       F DD+   + + I+   L  IE S I+I+
Sbjct: 14  YDVFLSFRGEDTGKTFTDHLYTALDENGFYAFRDDEKHEKREEIAPEFLTAIEESKISIL 73

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR--K 97
           +FS+ YASSRW                      FY VDPS VR Q  S     S  R  +
Sbjct: 74  VFSKNYASSRWCLDELETIIKSMKKPGRMVMPVFYHVDPSEVRDQIGSCEVFLSHERDAE 133

Query: 98  RFPEKMKRWKNALTEAADLSGF--DSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
              EK+ RW+ AL EA++L G+   +     ES+LI+EI  D+L+RL+      +   VG
Sbjct: 134 ETKEKVNRWRAALREASNLVGWRLHNQANWYESQLIKEIITDILRRLNCELLQVDYDTVG 193

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +E  ++++ SL+ +  + V  + I GI GI K TIA A++NKIS HF+ + F  NV E  
Sbjct: 194 MEFRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKISYHFQSTIFLTNVGENS 253

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDV---------------- 259
               +   Q     +L  D ++        R   K+V +V DDV                
Sbjct: 254 RGHHLNLPQ---FQQLLDDASI----GTYGRTKNKRVLLVVDDVDRLSQVEYLVKLRDSF 306

Query: 260 TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKA 319
           +  SR+I TTRD+ +L     +  Y  K L + +A  LF   AF        ++ L +  
Sbjct: 307 SLRSRIIFTTRDRHLLNVAKLDASYESKGLTHEEAIHLFSWHAFKQTFPKEDYVGLVNHV 366

Query: 320 IKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVF 379
           + Y +G PLALKVLG  L G++   W+  + KL    H EI   LK+S+D L  +++ +F
Sbjct: 367 VGYVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEIYNELKVSFDGLTPTEQEIF 426

Query: 380 LDIACFLEGEHRDEVISIFDA----SKSLINL--DLFY------RIRMHDLLRDMGREIV 427
           L + C L+G+  + V +I D+    S+S I +  D+        ++ MHDLL+ MG++++
Sbjct: 427 LKVVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATISNNKLYMHDLLQQMGQKLI 486

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
            + + + P KR+RL   KD+Y  L +NTGTE I+           +I  +S  F KMPKL
Sbjct: 487 DENNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQ-----------KIQFSSAGFLKMPKL 535

Query: 488 RFL----------RFYGDK------NKCMVSHL---------EGVPFAEVRHLEWP-QCP 521
             L           F GD       ++  +  L                ++ L  P   P
Sbjct: 536 YSLMHLPLKSLPPNFPGDSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMHLP 595

Query: 522 LKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------SLCT-------FKTPITFE 566
           LK+L  N   + L+ L +  + + QLW   + L +      S C        F +    +
Sbjct: 596 LKSLPPNFPGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMPALK 655

Query: 567 II---DCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLER 619
           I+    CK L  LP    EL+ LE L   G + +   PE   ++  +K L L + + ++ 
Sbjct: 656 ILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHL-DETAIKE 714

Query: 620 IPESIRHLSKLTFLFISHCERL--QTLPELPC 649
           +P SI HL+ L FL + HC+ L  +    LPC
Sbjct: 715 LPSSIYHLTALEFLNLEHCKNLGSELRSCLPC 746


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 197/577 (34%), Positives = 299/577 (51%), Gaps = 90/577 (15%)

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSE-LSKDGNM-- 237
           +GGI K T+A  V+++    F+GS F  NVRE  +E  G + LQ++L+SE L K  N+  
Sbjct: 1   MGGIGKTTVARVVYDRFRWQFKGSCFLANVREVFDEKDGPRRLQEQLVSEILMKRANICD 60

Query: 238 --RNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCW 279
             R IE    +L RKK+ IV DDV                  GSR+IIT+RD+QVL    
Sbjct: 61  SSRGIEMIKRKLQRKKILIVLDDVDDRKQLESLAAESKWFGPGSRIIITSRDRQVLTRNG 120

Query: 280 ANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCG 339
             + Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLAL+V+G ++ G
Sbjct: 121 VARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHG 180

Query: 340 RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD 399
           RS   W SA+ +L  IP  EI +VL+IS+D L + +K +FLDIACFL+G  +D +I I D
Sbjct: 181 RSILEWGSAINRLNEIPDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILD 240

Query: 400 A-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
           +              KSLI++    ++ MH+LL+ MG+EIVR ES   PG+R+RLW ++D
Sbjct: 241 SCGFHAHIGTQVLIEKSLISVSR-DQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYED 299

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEG 506
           +   L  NTG E IE I LD+  + +E   N  AFSKM KLR L+     N   +S    
Sbjct: 300 VCLALMDNTGKEKIEAIFLDIPGI-KEAQWNMKAFSKMSKLRLLKI----NNVQLSEGPE 354

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW------------------ 546
               ++R LEW   P K+L   +  ++LV L M  + +EQLW                  
Sbjct: 355 DLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGYKSAVKLKIINLSNSL 414

Query: 547 -----DDVQRLPS-----------------SLCTFKTPITFEIIDCKMLERLPD--ELEN 582
                 D+  +P+                 SL   K      +I+C+ +  LP   E+E+
Sbjct: 415 YLSKSPDLTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLEMES 474

Query: 583 LEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           L++ T+ G + +   P+ +G ++ + +L L      E  P SIRH+  L  L +++C++L
Sbjct: 475 LKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSP-SIRHMIGLEVLSMNNCKKL 533

Query: 642 QTLP-ELPC--NLGLLSARNCTSLEKLPAGLSSMSSV 675
           +++   + C  +L  L    C+ L+ +P  L  + S+
Sbjct: 534 ESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESL 570



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 137/343 (39%), Gaps = 68/343 (19%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
           ++ +  S+   K+    ++  C  L+ +P  LE +E L    V GT+IR+LP S+  L  
Sbjct: 533 LESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKN 592

Query: 606 VKRLILSN-------------------------NSNLERIPESIRHLSKLTFLFISHCER 640
           +  L L                            +N   +P SI  LS L  L +  C  
Sbjct: 593 LAVLSLDGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTM 652

Query: 641 LQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWM 700
           L++L E+P  +  ++   C SL+ +P  +   SS        F+ LD  EL E      M
Sbjct: 653 LESLLEVPSKVQTVNLNGCISLKTIPDPIKLSSS----QRSEFMCLDCWELYEHNGQDSM 708

Query: 701 KHSLYEE--RGIKKS-----MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
              + E   +G+        +  PGNEIP WF HQS  SS +++     P+      S  
Sbjct: 709 GSIMLERYLQGLSNPRPGFRIVVPGNEIPGWFNHQSKESSISVQV----PSW-----SMG 759

Query: 754 FCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFL 813
           F A V F A+        GE         + C +K     +  S        + SDH++L
Sbjct: 760 FVACVAFSAY--------GES-------PLFCHFKANGRENYPSPMCLSCKVLFSDHIWL 804

Query: 814 GCNSFGGEYFGPNYDEFSF-RIHCSFHFPPYLERG-EVKKCGI 854
              SF        +   SF  I  SFH     ERG +VK CG+
Sbjct: 805 FYLSFDYLKELKEWQHGSFSNIELSFH---SYERGVKVKNCGV 844


>gi|15242300|ref|NP_199319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007813|gb|AED95196.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1165

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 303/1099 (27%), Positives = 457/1099 (41%), Gaps = 264/1099 (24%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF++FRGED R  F SHL   L   +IK FID+   +G+ + ++LL  I  S IA+ I
Sbjct: 14   HQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPL-ETLLTKIHDSKIALAI 72

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FS +Y  S W                      FY+VDPS VR     FG  F  L +R  
Sbjct: 73   FSGKYTESTWCLRELAMIKDCVEKGKLVAIPIFYKVDPSTVRGVRGQFGDAFRDLEERDV 132

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
             K K WK AL     L G   +   PES+++ EI  +V K L       ++ +V V+ S 
Sbjct: 133  IKKKEWKQALKWIPGLIGITVHDKSPESEILNEIVKEVKKVLKKVSLEGSQKVVSVDPS- 191

Query: 161  EEIESLLCIGSE------------------------GVCKLRIWGIGGISKITIAGAVFN 196
            + I++L  +G E                        G   + + G+ GI K T+   ++ 
Sbjct: 192  QSIDTLSSVGGEKDKTFGIKQRLKELEEKLDLVKYKGTRVIGVVGMPGIGKTTLVKELYK 251

Query: 197  KISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIES-------QLNRLAR 249
                 F        +R       ++ L   LL +L  + N   ++S           L  
Sbjct: 252  TWQGKFSRYALIDQIRGKSNNFRLECLPTLLLEKLLPELNNPQLDSIEEPYKTHKGLLRE 311

Query: 250  KKVRIVFDDVT----------------------SGSRVIITTRDKQVLKNCWANKKYRMK 287
            +KV +V DDV+                       GSR+II T D   LK    +  Y ++
Sbjct: 312  RKVLVVLDDVSRREQIYALLGKYDLHSKHEWIKDGSRIIIATNDISSLKG-LVHDTYVVR 370

Query: 288  ELVYADAHKLFCQWAFGGDHLDASHIE---LTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
            +L + D  +LF   AF  D      ++   L+D+ + YA+G PLALK+LG  L  ++ + 
Sbjct: 371  QLNHRDGLQLFRYHAFHYDQATPPKVDFMKLSDEFVHYARGHPLALKILGRELYEKNMKH 430

Query: 345  WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF------ 398
            WE+ +  L   P   I EV+++SYD L  +QK+ FLDIACF   +  D V S+       
Sbjct: 431  WETKLIILAQSPTTYIGEVVQVSYDELSLAQKDAFLDIACF-RSQDVDYVESLLVSSDPG 489

Query: 399  --DASKSLINLDLF----YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
              +A K+L N  L      R+ MHDLL    RE+  K S     K+ RLW  +DI  V +
Sbjct: 490  SAEAIKALKNKFLIDTCDGRVEMHDLLYRFSRELDLKASTQGGSKQRRLWVRQDIINVQQ 549

Query: 453  KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--KNKCMVSH------- 503
            K  G   + GI LD+++V  E  ++   F  M  LR+L+ Y     ++C+ ++       
Sbjct: 550  KTMGAANVRGIFLDLSEVKVETSLDREHFKNMRNLRYLKLYNSHCPHECLTNNKINMPDG 609

Query: 504  LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP-------- 553
            LE +P  EVR L W + PL+ L  +     LV LK+P +++E+LWD V+  P        
Sbjct: 610  LE-LPLKEVRCLHWLKFPLEELPNDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLN 668

Query: 554  --SSLCTFK----------------------------TPITFEIIDCKMLERLPDELENL 583
              S LC+                              +  T  + +C   +  P   ENL
Sbjct: 669  HSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRDVNLTSLKTLTLSNCSNFKEFPLIPENL 728

Query: 584  EYLTVKGTTIRELPESLGRLSWVKRLILSNNSN---LERIPESIRHLSKLTFLFISHCER 640
            + L + GT+I +LP+++G L   KRL+L N  +   LE IP  +  L  L  L +S C +
Sbjct: 729  KALYLDGTSISQLPDNVGNL---KRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSK 785

Query: 641  L---------------------QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVN 679
            L                     +T+P+LP    L  +RN   L  LPAG++ +S +  ++
Sbjct: 786  LKEFPEINKSSLKILLLDGTSIKTMPQLPSVQYLCLSRN-DHLIYLPAGINQVSQLTRLD 844

Query: 680  L-----------------------CNFLKLDPNELSEIVKD------------GWMKHSL 704
            L                       C+ LK     L+ I+              G ++ + 
Sbjct: 845  LKYCTKLTYVPELPPTLQYLDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTNCGNLEQAA 904

Query: 705  YEE-----------RGIKKSMYFPGNE-----------IPKWFRHQSMGSSATLKTRPPR 742
             EE               +  Y  G+E           +P WF H+++GS   L  R   
Sbjct: 905  KEEITSYAQRKCQLLSDARKHYNEGSEALFSTCFPGCEVPSWFGHEAVGS---LLQRKLL 961

Query: 743  PAGYNKLIS-FAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLYSWFL 800
            P  ++K +S  A CAVV FP            D  D  + ++V C +K K+E   +  F 
Sbjct: 962  PHWHDKRLSGIALCAVVSFP------------DSQDQLSCFSVTCTFKIKAEDKSWVPFT 1009

Query: 801  ----------GKISYVESDHVFLGCNSFGGEYF---GPNYDEFSFRIHCSFHFPPYLERG 847
                       K   +ESDHVF+   S           N D+ +F    S  F    +  
Sbjct: 1010 CPVGIWTREGNKKDRIESDHVFIAYISSPHSIRCLEEKNSDKCNFS-EASLEFTVTSDTS 1068

Query: 848  -----EVKKCGIHFVYAQD 861
                 +V KCG+  VY  D
Sbjct: 1069 GIGVFKVLKCGLSLVYEND 1087


>gi|449482303|ref|XP_004156242.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1633

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 221/768 (28%), Positives = 369/768 (48%), Gaps = 120/768 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG D R  F  +L+  L+   IK F+D++  + GD++   L   I+ S  AI+
Sbjct: 16  YDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDL-HDLFKIIDESRSAIV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF------- 92
           + SE YAS++W                      FY +DPS V+ QS +F   F       
Sbjct: 75  VLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFKTSFDEHEANV 134

Query: 93  -----SRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ 147
                ++ +++  ++++ WK+AL +  + +G        E  ++ +IA+ +        +
Sbjct: 135 LKEIDNQEKEKRLKELQNWKSALKKIGNHTGVVITKNSSEVDIVNKIASQIFDAWRPKLE 194

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
           + NK LVG+   +  +   L +G + V  + I G+GGI K TIA  VF+ I   FE   F
Sbjct: 195 ALNKNLVGMTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFEDCCF 254

Query: 208 ALNVREAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS 261
            L +   +    +  LQ+++LS++    + R       +E   NRL+ +KV IV D +  
Sbjct: 255 -LTLPGGDSKQSLVSLQREMLSQIFHKEDFRIWHENHGVEMIKNRLSGRKVLIVLDGIEE 313

Query: 262 ----------------GSRVIITTRDKQVLKNCWAN----KKYRMKELVYADAHKLFCQW 301
                           GSR+IITTR+K +L  C  N    K Y ++EL +  A +LF + 
Sbjct: 314 RRQLEMLAGSIEWFGPGSRIIITTRNKGLL--CHPNYDEMKVYNVEELDHDSALQLFLKH 371

Query: 302 AFGGDHLDA-SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEI 360
           AFG +H +  S ++L+++ ++ A+ +PLAL+V+G  L G+   VW   +++L  +     
Sbjct: 372 AFGSNHQNNDSFMDLSNEIVEKAKRLPLALRVIGSSLYGKDITVWRETLKRLIKVDERNF 431

Query: 361 EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINL 407
            +VLKISYD L    + VFLDI CF  G++ D VI I ++              + LI +
Sbjct: 432 FDVLKISYDGLGVESQQVFLDITCFFNGKNEDRVIEILESFGYSPNSEVQLLMQRCLIEV 491

Query: 408 DLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM 467
               +I +HDL+ +MGREIVRKES+    K++R+W H+D+Y    +      I+GI L +
Sbjct: 492 S-HKKILVHDLILEMGREIVRKESLTQAEKQSRIWLHEDLYCRFAEKHDLMHIQGIVLSL 550

Query: 468 NK-VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL- 525
            K +   I +++ +FS+M KLR L     +    + +L  +    +R + W   P K+L 
Sbjct: 551 AKEMEESIELDAESFSEMTKLRILEISNVELDEDIEYLSPL----LRIINWLGYPSKSLP 606

Query: 526 -NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE 584
               +  L  L +P + + ++WD  +R P            ++ID          + N E
Sbjct: 607 PTFQSRYLFELLLPHSHLLRIWDGKKRFPK----------LKLID----------VSNSE 646

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           +L V        P+  G +  ++RL+L N   L  I  SI  L+KL  L +  C  L+  
Sbjct: 647 HLRVT-------PDFSG-VPNLERLVLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHF 698

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           P        +  +N  +L+    GL     + ++     L LD + ++
Sbjct: 699 P------ANIRCKNLQTLKLSGTGLEIFPEIGHMEHLTHLHLDGSNIT 740



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           ++PE L   S ++ L LS N N   +P+S+ HL KL  L ++ C  L+ LP+LP +L  +
Sbjct: 871 DIPEDLHCFSSLETLDLSYN-NFTTLPDSLSHLKKLKTLNLNCCTELKDLPKLPESLQYV 929

Query: 655 SARNCTSLEK 664
              +C S+ +
Sbjct: 930 GGIDCRSMSE 939


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 318/593 (53%), Gaps = 70/593 (11%)

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE- 213
           G+   ++E++SL+ I S  V  + I+G+GGI K TIA  V+N IS  FE   F  NVRE 
Sbjct: 15  GMNFHLKELKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRER 74

Query: 214 AEETGGIKDLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTSG----- 262
           +++   +  LQK+LL+ ++K   ++  NI   +N    R   K+V ++ DDV        
Sbjct: 75  SKDHSSLLQLQKELLNGVAKGKYLKISNIHEGVNVIRNRFLSKRVLLILDDVDKSEQLQF 134

Query: 263 -----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                      SR+IIT+RD+ +L+    +  Y +K L Y ++ +LFC  AF  + L   
Sbjct: 135 LVGEHGWFGPRSRIIITSRDQHLLEEYEMDASYEVKVLDYEESMQLFCLHAFKQNILRKD 194

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +++L++  + Y  G+PLAL++LG +L  +SK  WES ++KL+  P++ ++ VLKIS+D L
Sbjct: 195 YVDLSNDVVNYVNGLPLALEILGSFLFNKSKLEWESTLQKLKRKPNMNVQNVLKISFDGL 254

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDM 422
           D+ +K +FLD+ACF +G +  +V  + D         + K LI L     I MHDL+++M
Sbjct: 255 DEIEKEIFLDVACFFKGWNETDVTRLLDHANIVIRVLSDKCLITLS-HNIIWMHDLVQEM 313

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           GREIVR+     PGK +RLW  +DI  VL++  GTEAIEGI LDM++ +REI   + AF 
Sbjct: 314 GREIVRQNHPKEPGKWSRLWDPEDICLVLRRKMGTEAIEGIFLDMSR-SREISFTTEAFR 372

Query: 483 KMPKLRFLRFY----------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAE 530
           +M +LR  + Y           +  K ++     +P  ++R+L W    LK+L  N   E
Sbjct: 373 RMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPSNFHGE 432

Query: 531 KLVSLKMPCTKVEQLWDDVQ-------------RLPSSLCTFKTPITFEIIDCKMLERLP 577
            L+ L +  + +EQLW   +             +L + +  F      E ++ ++ E+L 
Sbjct: 433 NLIELNLKHSNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLD 492

Query: 578 DE------LENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
                   L+ L  L ++G   I  LP ++  L  +KRL L + + ++ +P SI HL++L
Sbjct: 493 KVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIA-IDELPSSIHHLTQL 551

Query: 631 TFLFISHCERLQTLPELPCNLGLLSARN---CTSLEKLPAGLSSMSSVLYVNL 680
             L I  CE L++LP   C L  L   +   C++L   P  + +M  +  +NL
Sbjct: 552 QTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEWLTELNL 604



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 11/157 (7%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRL 603
           ++++ LPSS+C  K+    ++  C  L   P+ +EN+E+LT   + GT ++ LP S+  L
Sbjct: 560 ENLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEWLTELNLSGTHVKGLPSSIEYL 619

Query: 604 SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNC 659
           + + RL L    NL  +P SI  L  L  L +  C  L+T PE    + C + L  +R C
Sbjct: 620 NHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTC 679

Query: 660 TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
             +++LP  +  ++ + ++ L  C  L+  P+ +  +
Sbjct: 680 --IKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRL 714



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 147/370 (39%), Gaps = 97/370 (26%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKGTTIRELPESLG--- 601
            +++ LPSS+C  K      +  C  LE  P+ +E++E    L + GT+I++LP S+G   
Sbjct: 774  NLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLN 833

Query: 602  -----RLSW-----------------------------VKRLILSNNSNLERIPESIRHL 627
                 RLS+                              ++L LS N N+  IP  I  L
Sbjct: 834  HLTSFRLSYCTNLRSLPSSIGGLKSLTKLSLSGRPNRVTEQLFLSKN-NIHHIPSVISQL 892

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
              L  L ISHC+ L+ +P+LP +L  + A  CT L  L +  S + S             
Sbjct: 893  CNLECLDISHCKMLEEIPDLPSSLREIDAHGCTGLGTLSSPSSLLWS------------- 939

Query: 688  PNELSEIVKDGWMK--HSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
                       W K   + +E   I        N IP+W  HQ +GS   ++  P     
Sbjct: 940  -------SLLKWFKKVETPFEWGRIN----LGSNGIPRWVLHQEVGSQIRIEL-PMNCYH 987

Query: 746  YNKLISFA-FC---AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKS--EGHLYSWF 799
             +  + F  FC    VV     L++      ++D D   YA    +K  S  E H     
Sbjct: 988  DDHFLGFGFFCLYEPVVDLNLSLRF------DEDLDEKAYA----YKGASWCECH----- 1032

Query: 800  LGKISYVESDHVFLG-CNSFG-GEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFV 857
               I+  ESD V++  C     G+    N  +    +H SF          +K CGIH V
Sbjct: 1033 --DINSSESDEVWVVYCPKIAIGDKLQSNQYK---HLHASFDACIIDCSKNIKSCGIHLV 1087

Query: 858  YAQD-SADHI 866
            Y+QD   +HI
Sbjct: 1088 YSQDYQQNHI 1097



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 5/137 (3%)

Query: 544 QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESL 600
           Q   +++ LPSS+C  K+    ++  C  LE  P+ +EN+E L    + GT I+ELP S+
Sbjct: 699 QCCQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSI 758

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC- 659
             L+ +  + L  + NL  +P SI  L  L  L +  C  L+T PE+  ++  L   +  
Sbjct: 759 EYLNHLTSMRLVESKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLS 818

Query: 660 -TSLEKLPAGLSSMSSV 675
            TS++KLP+ +  ++ +
Sbjct: 819 GTSIKKLPSSIGYLNHL 835



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTV 588
           L  L++ C K      +++ LPSS+   K+    ++  C  LE  P+ +E++E    L +
Sbjct: 622 LTRLELRCCK------NLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNL 675

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
             T I+ELP S+G L+ +  L L    NL  +P SI  L  L  L + +C  L+  PE+ 
Sbjct: 676 SRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIM 735

Query: 649 CNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
            N+  L   +   T +++LP+ +  ++ +  + L
Sbjct: 736 ENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRL 769


>gi|297791295|ref|XP_002863532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309367|gb|EFH39791.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 278/1085 (25%), Positives = 440/1085 (40%), Gaps = 246/1085 (22%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF++FRG + R+ F SHL   L  K I  FID    RG  I + LL  I+ S IA++I
Sbjct: 14   HQVFINFRGAELRNGFVSHLVTALQSKDINVFIDKLEDRGKPI-EILLDRIQKSRIALVI 72

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR-KRF 99
            FS +Y  S W                      FY+V+PS V+     FG  F  L    +
Sbjct: 73   FSGKYTESVWCMREVAKIKDCMDEGTLEVIPIFYKVEPSTVKYLMGDFGDTFRSLAMNEY 132

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL----------DATFQSK 149
             E  ++W++AL   + + G   +    ES+++++  +D+ K L           +   S 
Sbjct: 133  DEGKEKWEDALKAVSGIMGTVVDEKSEESEIVKKTVDDIRKALIRIPSEGSQTTSVNPSP 192

Query: 150  NKGL-----------VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI 198
            N+              G E  ++E+E  L    +  C + + G+ GI K T+   +FNK 
Sbjct: 193  NRDTRTSSGEEKHETFGNELRLKELEEKLDRTIKKTCIIGVVGMPGIGKTTLLKELFNKW 252

Query: 199  SRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNR-------LARKK 251
               F        +R         D+  KLL       N+  +E+  +        L  +K
Sbjct: 253  QNKFNRCALIDEIRGKSNPSEDFDILPKLLVRELLAFNVSTLENVEDPYEVFKGLLLNEK 312

Query: 252  VRIVFDDV----------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAH 295
            V ++ DDV                T GSR++I T D  +LK+ W    Y +  L + D  
Sbjct: 313  VLVILDDVSKSEQIDALLGKRDWITEGSRIVIATNDMSLLKD-WVTDTYVVPLLNHQDGL 371

Query: 296  KLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
            KLF   AF   +     ++L+ + + +A+G+PLALK+LG  L G+ +  WE   + L   
Sbjct: 372  KLFHYHAFDEANPPEDFMQLSKEFVHFARGLPLALKILGKELYGKGRLQWEEKRKLLAES 431

Query: 356  PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINL----DLFY 411
            P   IE V ++SYD L   QK  FLDIACF   +    V S+  +S+++  +    D F 
Sbjct: 432  PSPFIESVFRVSYDELSSDQKKAFLDIACF-RSQDVAYVESLLASSEAMSAVKALTDKFL 490

Query: 412  ------RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKKNTGTEAI 460
                  R+ MHDLL    RE+  K S        RLW H+DI +     V++K      +
Sbjct: 491  INTCDGRVEMHDLLYTFSRELDPKTSTEDDRTGRRLWRHQDIIKEGKINVVQKEMRAAHV 550

Query: 461  EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEV 512
             GI LD+++V  E  +    F++M  LR+L+ Y          +N+  +     +P  EV
Sbjct: 551  RGIFLDLSQVKGETSLAKDHFNRMTNLRYLKVYNSHCPQECKTENRINIPDGLKLPLKEV 610

Query: 513  RHLEWPQCPLKTLNICAE--KLVSLKMPCTKVEQLWD----------------------- 547
            R L W + PL  L        LV LK+P +++E+LW+                       
Sbjct: 611  RCLHWLKFPLDELPEAFNPINLVDLKLPYSEIERLWEGDKDTPVLKWVDLNHSSMLSSLS 670

Query: 548  ------DVQRLPSSLCT---------FKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
                  ++Q L    CT          K+  +  +  C   ++ P   ENLE L +  T 
Sbjct: 671  GLSKAPNLQGLNLEGCTRLESLADVDSKSLKSLTLSGCTSFKKFPLIPENLEALHLDRTA 730

Query: 593  IRELPES------------------------LGRLSWVKRLILSNNSNLERIPE------ 622
            I +LP++                        + +L  +++L+LS    L+  PE      
Sbjct: 731  ISQLPDNVVNLKKLVLLNMKDCELLENIPTCVDKLKALQKLVLSGCKKLQNFPEVNKSSL 790

Query: 623  -----------------------------------SIRHLSKLTFLFISHCERLQTLPEL 647
                                                I  LS+LT L + +C+ L ++PEL
Sbjct: 791  KILLLDRTAIKTMPQLPSVQYLCLSFNDHLSCIPADINQLSQLTRLDLKYCKSLTSVPEL 850

Query: 648  PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL--- 704
            P NL    A  C++L+ +   L+ +   +  N C F   +   L +  K+    ++    
Sbjct: 851  PPNLQYFDADGCSALKTVAKPLARIMPTVQ-NHCTFNFTNCGNLEQAAKEEIASYAQRKC 909

Query: 705  ---------YEERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLIS- 751
                     Y+E    ++++   FPG E+P WF H  +GS   LK     P  ++K +S 
Sbjct: 910  QLLSDARKHYDEGLSSEALFTTCFPGCEVPSWFCHDGVGSRLELKL---LPHWHDKSLSG 966

Query: 752  FAFCAVVVFPAFLKY---------FRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGK 802
             A CAV+ FP              F  K+G   W      V   W R+ E          
Sbjct: 967  IALCAVISFPGVEDQTSGLSVACTFTIKAGRTSWIPFTCPV-GSWTREGE---------- 1015

Query: 803  ISYVESDHVFLG---CNSFGGEYFGPNYDEFSFRIHCSFHFP---PYLERGEVKKCGIHF 856
               ++S+HVF+    C          N D+ +F    S  F       E G+V +CG+  
Sbjct: 1016 --TIQSNHVFIAYISCPHTIRCLKDENSDKCNF-TEASLEFTVTGGTSEIGKVLRCGLSL 1072

Query: 857  VYAQD 861
            VY ++
Sbjct: 1073 VYEKN 1077


>gi|357500729|ref|XP_003620653.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495668|gb|AES76871.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1235

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 224/703 (31%), Positives = 356/703 (50%), Gaps = 85/703 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT +L   L  K I  F DD  L +G+ I   LL  IE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDYLFDALETKGIYAFRDDTNLKKGEVIGPELLRAIEGSQVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY +DPS VRKQS  +   F +  +RF
Sbjct: 80  VFSRNYASSTWCLQELEKICECVQGPEKHVLPVFYDIDPSEVRKQSGIYCESFVKHEQRF 139

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              P K+ RW+ AL +   +SG+D    +P++  I++I  +++  LD      +K LVG+
Sbjct: 140 QQDPHKVSRWREALNQVGSISGWDLRD-KPQAGEIKKIVQNIMNILDCKSSFISKDLVGI 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
              IE +++ L + S +GVC + I G+GGI K T+A  ++ +IS  F  S F  +V +  
Sbjct: 199 NSRIEVLQNHLLLDSVDGVCAIGICGMGGIGKTTLAMTLYGQISHQFSASCFIDDVSKIY 258

Query: 216 ET-GGIKDLQKKLLSELS--KDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G  D Q+++L +    +   + N  S  +    RL  +K  ++FD+V         
Sbjct: 259 RLYDGPLDAQRQILLQTVGIEHHQICNRYSATDLIRRRLRHEKALLIFDNVDQVEQLEKI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR++I +RD+ +LK    +  Y++  +   D+++LFC+ AF  + +  S 
Sbjct: 319 AVHREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLMNSTDSYELFCRKAFKVEKIIMSD 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            + L ++ + YA+G+PLA+KVLG +L G S   W+SA+ +L   PH ++ +VL +S+D  
Sbjct: 379 YQNLANEILDYAKGLPLAIKVLGSFLFGHSVAEWKSALARLRESPHNDVMDVLHLSFDGP 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKES 431
           +   KNV   + C   G H D  + +    KSLI+++    I+MH LL ++GR+IV++ S
Sbjct: 439 EKYVKNV---LNCC--GFHADIGLGVL-IDKSLISIE-DANIKMHSLLEELGRKIVQENS 491

Query: 432 INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR 491
                K +R+W  K +Y V+ +N   E +E I L+    +  I MN   FSKM  LR L 
Sbjct: 492 SKEQRKWSRIWSKKQLYNVMMENM-EEHVEAIFLN----DDGIDMNVEHFSKMSNLRLLI 546

Query: 492 FYGD--------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTK 541
            Y +        K  C    L  +   ++R+ +W   P   L +     +LV L +  + 
Sbjct: 547 IYNNSAWNYTTYKRPCFHGKLSCLS-NKLRYFDWEHYPFWELPLSFHPNELVELILKNSS 605

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIRELPE 598
            +QLW   +  P+           ++ D K +E++ D  E  NLE L + +   + EL  
Sbjct: 606 FKQLWKSKKYFPNLK-------ALDLSDSK-IEKIIDFGEFPNLESLNLERCEKLVELDS 657

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           S+G L  +  L L    NL  IP SI  LS L  L++  C ++
Sbjct: 658 SIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLEDLYMCGCSKV 700



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 15/175 (8%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           + ++P+++  L  ++RL L+ N     +P S+R LSKL +L + HC+ L++LP+LP    
Sbjct: 753 LNQVPDAIEGLHSLERLYLAGNY-FVTLP-SLRKLSKLEYLDLQHCKLLESLPQLPFPTT 810

Query: 653 L-----LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE 707
                 + +++ +   +   G + +   ++    N  KL   E    +   WM H +   
Sbjct: 811 TEQDWWIRSQDFSGYRRTNHGPALIGLFIF----NCPKLVERERCSSITISWMAHFIQAN 866

Query: 708 RGIKK----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           +   K     +  PG+EIP W  +QS+G+S ++   P      N +I F  C ++
Sbjct: 867 QQPNKLSALQIVTPGSEIPSWINNQSVGASISIDESPVINDNNNNIIGFVSCVLI 921


>gi|357513935|ref|XP_003627256.1| Resistance protein PRG [Medicago truncatula]
 gi|355521278|gb|AET01732.1| Resistance protein PRG [Medicago truncatula]
          Length = 809

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 207/664 (31%), Positives = 332/664 (50%), Gaps = 122/664 (18%)

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQ--KKLLSELSKDGNMRN 239
           + GI K TIA  VF ++   +E  YF  NVRE  E  G   L+  K +LS L K+ N+++
Sbjct: 1   MPGIGKTTIAEEVFRRLRSKYESCYFMANVREESERCGTNSLRLRKIILSTLLKEENLKD 60

Query: 240 IESQLN--------RLARKKVRIVFDDVTSG----------------SRVIITTRDKQVL 275
               +N        RL R KV IV DD+                   SR+IITTRDKQVL
Sbjct: 61  --ELINGLPPLVKKRLHRMKVLIVLDDIKDAEQLEVLIGTVDWLGPRSRIIITTRDKQVL 118

Query: 276 KNCWANKKYRMKELVYADAHKLFCQWAFGG-DHLDASHIELTDKAIKYAQGVPLALKVLG 334
                +  Y ++ L  A++ +LF   AF   +HL+  + EL+ K + Y  GVPL LK L 
Sbjct: 119 AG-KVDDIYEVEPLDSAESFQLFNLHAFTKHEHLEMEYYELSKKMVDYTAGVPLVLKALA 177

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRD-- 392
             LCG+ K++WES  + L+I     +  V ++ Y +LD  +KN+ LDIACF +G      
Sbjct: 178 NLLCGKDKDIWESQAKILKIEQIENVHVVFRLIYTNLDSHEKNILLDIACFFDGLKLKLD 237

Query: 393 -----------EVISIFD--ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRN 439
                       V +  D    K+L+ +     + MHD++++   EIVR+ES+  PG R+
Sbjct: 238 LIKLLLKDRHYSVSTKLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESVEEPGSRS 297

Query: 440 RLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY--GDKN 497
           RL +  DIY VLK + G EAI  +++ ++++ +E+H++   F+KM KL+FL  Y  G +N
Sbjct: 298 RLLNPDDIYHVLKDDKGGEAIRSMAIRLSEI-KELHLSPRVFAKMSKLKFLDIYTNGSQN 356

Query: 498 KCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP 553
           +  +S   G+ F   E+R+L W   PL++L     AE LV L +P +++++LW+ V+ + 
Sbjct: 357 EGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAENLVRLSLPYSRLKKLWNGVKDIV 416

Query: 554 -------------SSLCTFKTPITFEIIDCKM---------------LERLPDELENLEY 585
                        + L  F    + E+I+ ++               L+     L +L Y
Sbjct: 417 NLNVLILSSSTFLTELPDFSKAASLEVINLRLCLKELDLSGCISLTSLQSNDTHLSSLRY 476

Query: 586 LT---------------------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
           L+                     ++GT+I+ LP S+G  + +++L L+ +++++ +P+SI
Sbjct: 477 LSLYNCTSVKEFSVTSKHMNILDLEGTSIKNLPSSIGLQTKLEKLYLA-HTHIQSLPKSI 535

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL-----YVN 679
           R+L++L  L +  C  LQTLPEL  +L +L A  C SLE + A  S+ S  L      V 
Sbjct: 536 RNLTRLRHLDLHLCSELQTLPELAQSLEILDACGCLSLENV-AFRSTASEQLKEKRKRVI 594

Query: 680 LCNFLKLDPNELSEIVKDGWMKHSLYEERGIKK-------------SMY-FPGNEIPKWF 725
             N LKL+   L  I  +  +    +  + I               S+Y +PG+EIP+W 
Sbjct: 595 FWNCLKLNEPSLKAIELNAQINMMSFSYQHISTWDRDHDHNHNHNHSIYVYPGSEIPEWL 654

Query: 726 RHQS 729
            + +
Sbjct: 655 EYST 658


>gi|357499835|ref|XP_003620206.1| Resistance protein [Medicago truncatula]
 gi|355495221|gb|AES76424.1| Resistance protein [Medicago truncatula]
          Length = 777

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 194/566 (34%), Positives = 295/566 (52%), Gaps = 71/566 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SF G DTR+ FT HL   L+   I  FIDD +  RG+    ++   I  S IAII
Sbjct: 13  YDVFISFEGFDTRNGFTGHLWKALNDIGILAFIDDTEFSRGEETKPAIFKAIHVSRIAII 72

Query: 61  IFSERYASSRWF-----------------------FYRVDPSHVRKQSHSFGRHFSRLRK 97
           +FS+ YA S++                        +Y ++ SHVR QS  F   F +  +
Sbjct: 73  VFSDNYAGSKFLLEELAFIVDNFQQSDNLRFIVPVYYNIEASHVRHQSGPFEAAFVKHEE 132

Query: 98  RF---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           RF    EK+ +WK AL++ A+L G+  + +  E + +++I  ++ +RLD          V
Sbjct: 133 RFHENREKVLKWKTALSQVANLPGWHFDGVEYEHQFLQKIVKEISRRLDRAPLHVADYPV 192

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  + E+   L + S  V  + I+GIGGI K T+A AV+N IS  FE S F  N+R++
Sbjct: 193 GLDSRLGEVFRHLELESHEVLTVGIYGIGGIGKTTLARAVYNTISDQFETSCFLSNIRKS 252

Query: 215 EETGGIKDLQKKLLSELS--KDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
             T  +  LQ  LLSE++  KD  +++    ++    RL RKKV ++ DDV         
Sbjct: 253 SNTQSLAHLQNILLSEMTGLKDIQLKDTSKGISEIKHRLYRKKVLLILDDVDRLEQMEAL 312

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRV+ITTRD+ +L      ++Y ++EL   DA  L     F    +D ++
Sbjct: 313 AGGLDWFGPGSRVVITTRDRHLLAFRGVERRYEVQELNDVDALDLLSHKVFKQGIVDPNY 372

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            EL ++A+ YA G+PLAL+V+G  L G S +  E A+ + + I   +I+++L++S+D+LD
Sbjct: 373 TELLNRAVTYASGLPLALEVIGSSLFGLSVDQCEHALNQFKRILPKDIQKLLRVSFDALD 432

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
              KN+FLDI C  +G    +V  +  A               KSLIN+        H L
Sbjct: 433 QEVKNIFLDITCCFKGYALADVEQLLCARYGHDMKYHIKVLIDKSLINILDGKVTTTHPL 492

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN-----TGTEAIEGISLDMNKVNRE 473
           +  MG+EIVR+ES   PG+R+RLW  +DI +VLK N      GT +IE I LD   +  E
Sbjct: 493 IESMGKEIVREESPEDPGRRSRLWFSEDIVEVLKNNKVRLLQGTSSIEIIHLDSPLIEDE 552

Query: 474 IHM---NSYAFSKMPKLRFLRFYGDK 496
             +     Y  + +  L +LR+  +K
Sbjct: 553 EAIEWDGKYLPNSLKVLEWLRYPSEK 578


>gi|358347701|ref|XP_003637894.1| Elongation factor Ts [Medicago truncatula]
 gi|355503829|gb|AES85032.1| Elongation factor Ts [Medicago truncatula]
          Length = 1319

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 220/714 (30%), Positives = 366/714 (51%), Gaps = 90/714 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT+ L   L  K I  F DD  L +G++I   LL TIE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTNFLFAALERKGIYAFRDDTNLPKGESIGPELLRTIEGSQVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS W                      FY VDPS V+KQS  +   F++  +RF
Sbjct: 80  VLSRNYASSTWCLQELEKICECIKGSGKYVLPIFYGVDPSEVKKQSGIYWDDFAKHEQRF 139

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              P K+ RW+ AL +   ++G+D    + +S  +E+I   +L  L       +K LVG+
Sbjct: 140 KQDPHKVSRWREALNQVGSIAGWDLRD-KQQSVEVEKIVQTILNILKCKSSFVSKDLVGI 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
               E ++  L + S +GV  + IWG+GGI K T+A  ++ +I   F+ S F  +V +  
Sbjct: 199 NSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKIF 258

Query: 216 ET-GGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G  D QK++L +    +   + N  S  +    RL+R+K  ++ D+V         
Sbjct: 259 RLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLERI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR++I +RD+ +LK    +  Y++  L + ++HKLFCQ AF  + +   +
Sbjct: 319 GVHREWLGAGSRIVIISRDEHILKEYKVDVVYKVPLLDWTESHKLFCQKAFKLEKIIMKN 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            + L  + + YA G+PLA+ VLG +L GR+   W+SA+ +L   P+ ++ +VL++SYD L
Sbjct: 379 YQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSALARLRQSPNKDVMDVLQLSYDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           ++++K +FLDIACF    +   + +I +               KSLI +     + MH L
Sbjct: 439 EETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSI-VEMHSL 497

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L ++GR+IV++ S     K +R+W  + +Y V  +N   + +E +      +++ +    
Sbjct: 498 LEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENM-EKHVEAVVF-FGGIDKNVEF-- 553

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGV---PFA---EVRHLEWPQCPLKTL--NICAE 530
              S M  LR L    D+   M+++ E V   P++   ++R+++W   P K L  +    
Sbjct: 554 --LSTMSNLRLLIIRHDEYY-MINNYELVMLKPYSLSNKLRYVQWTGYPFKYLPSSFHPA 610

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
           +LV L +  + ++QLW + + LP+           ++ D K LE++ D  +  NLE+L +
Sbjct: 611 ELVELILVRSCIKQLWKNKKHLPNLR-------RLDLSDSKKLEKIEDFGQFPNLEWLNL 663

Query: 589 -KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            +   + EL  S+G L  +  L L    NL  IP +I  LS L +L +S C +L
Sbjct: 664 ERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKL 717



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           +  +P+++  L  ++RL L  N N   +P S+R LS+L +L + HC+ L++LP+LP    
Sbjct: 786 LSHVPDAIECLHRLERLNLGGN-NFVTLP-SMRKLSRLVYLNLEHCKLLESLPQLPFPST 843

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL------YE 706
           +    +  +      GL     V++    N  KL   E    +   WMK  +      Y 
Sbjct: 844 IGPDYHENNEYYWTKGL-----VIF----NCPKLGERECCSSITFSWMKQFIQANQQSYG 894

Query: 707 ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
               +  +  PG+EIP W  +QSMG S  +   P      N +I F FCAV
Sbjct: 895 PYLYELQIVTPGSEIPSWINNQSMGGSILIDESPVIHDNKNNIIGFVFCAV 945


>gi|224114321|ref|XP_002332397.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832720|gb|EEE71197.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 523

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 192/517 (37%), Positives = 277/517 (53%), Gaps = 65/517 (12%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAI 59
           MYDVFLSFRG+DTR+NFTSHL+  L  + I  ++DD +L RG  I  +L   IE S  ++
Sbjct: 9   MYDVFLSFRGKDTRNNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSV 68

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHV----RKQSHSFGRHFSR 94
           IIFS  YASS W                      FY VDPS V    RK   +F  H   
Sbjct: 69  IIFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEVIERKRKYEEAFVEHEQN 128

Query: 95  LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
            ++   E+++ WK+ L+  A+LSG+D    R ES+ I+ IA  +  +L  T  + +K LV
Sbjct: 129 FKENL-EQVRNWKDCLSTVANLSGWDIRN-RNESESIKRIAKYISYKLSVTLPTISKKLV 186

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  +E +   +         + I G+GGI K TIA  V++     F+GS F  NVR+ 
Sbjct: 187 GIDSRVEVLNGFIGEEVGEAIFIGICGMGGIGKTTIARVVYDSFRWQFKGSCFLANVRDV 246

Query: 215 -EETGGIKDLQKKLLSEL-----SKDGNMRNIESQLNRLARKKVRIVFDDVTS------- 261
             E GG + LQ++LLSE+     S   + R IE    RL  KK+ ++ DDV         
Sbjct: 247 FAEKGGPRRLQEQLLSEILMERASVCDSYRGIEMIKRRLRLKKILLILDDVNDKKQLEFL 306

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IIT+RDK V       K Y  ++L   DA  LF Q AF  D      
Sbjct: 307 AAEPGWFGPGSRIIITSRDKNVFTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDF 366

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L+ + + YA G+PLAL+V+G +L GR    W  A+ ++  IP  EI +VL +S+D L 
Sbjct: 367 VKLSKQVVGYANGLPLALEVIGSFLYGRRIPEWRGAINRMNEIPDDEIIKVLLVSFDGLH 426

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA--------------SKSLINLDLFYRIRMHDL 418
           + +K +FLDIACFL+G   D +  I D                +SLI++    ++ MH+L
Sbjct: 427 ELEKKIFLDIACFLKGFKIDRITRILDGWRGFHTGIGIPVLIERSLISVSR-DQVWMHNL 485

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           L+ MG+EI+R+ES + PG+R+RLW ++D+   L  NT
Sbjct: 486 LQKMGQEIIRRESPDEPGRRSRLWTYEDVCLALMDNT 522


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 241/795 (30%), Positives = 378/795 (47%), Gaps = 155/795 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSFRG+DTR NFT HL+  LS K I+TF  D   +G+ I  + L  IE S   ++I
Sbjct: 226 YEVFLSFRGQDTRQNFTDHLYSALSQKGIRTFRMDH-TKGEMILPTTLRAIEMSRCFLVI 284

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YA S+W                      FY V+PS VR Q  S+G       ++ P
Sbjct: 285 LSKNYAHSKWCLDELKKIMESRRQMGKJVFPVFYHVNPSDVRNQGESYGEALXNHERKIP 344

Query: 101 -EKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E  ++ + AL E  +LSG+   N    ES  I +I   +L +        +K L+G++ 
Sbjct: 345 LEYTQKLRAALREVGNLSGWHIQNGF--ESDFIXDITRVILMKFSQKLLQVDKNLIGMDY 402

Query: 159 SIEEIE----SLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
            +E++E     ++   S  V  + I+G GGI K T+A  ++N+I   F  + F  NVRE 
Sbjct: 403 RLEDMEEIFPQIIDPLSNNVXMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 462

Query: 215 EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKK-------------VRIV 255
            ++ G+  LQK+LL + L K  N +RN++  +    +RL  KK             +  +
Sbjct: 463 SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEAL 522

Query: 256 FDD---VTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
             D      GSR+I+TTRDK +L+    +  Y  K+L + +A +LFC  AF  +H    +
Sbjct: 523 AGDHNWFGPGSRIIVTTRDKHLLEVHEMDALYEAKKLDHKEAVELFCWNAFKQNHPKEDY 582

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L++  + Y  G+PL LK          +E            P+ EI+ VLK SYD LD
Sbjct: 583 KTLSNSVVHYVNGLPLGLK----------RE------------PNQEIQRVLKRSYDVLD 620

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            +Q+ +FLD+ACF  GE +D V  I DA              K  I + L  +I MHDLL
Sbjct: 621 YTQQXIFLDVACFFNGEDKDFVTRILDACNFYAXSGIGVLGDKCFITI-LDNKIWMHDLL 679

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN-KVNREIHMNS 478
           + MGR+IVR+E    PGK +RL + + + +VL +         +  D   K++++    S
Sbjct: 680 QQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKMWDLEXAFMREDNKVKLSKDFEFPS 739

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA----EVRHLEWPQCPLKTL---NICAEK 531
           Y      +LR+L ++G         LE +P      ++  L+     LK L   ++  EK
Sbjct: 740 Y------ELRYLHWHG-------YPLESLPLGFYAEDLVELDMCYSSLKRLWEGDLLLEK 786

Query: 532 LVSLKMPCTK--------------VEQLWDD-----VQRLPS----------------SL 556
           L ++++ C++              +E+L  D     ++  PS                 L
Sbjct: 787 LNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSLLEVHPSIGKLNKLFLLNLKNCKKL 846

Query: 557 CTFKTPI---TFEIID---CKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVK 607
             F + I     EI++   C  L++ P+    +ENL  L +  T I ELP S+G L+ + 
Sbjct: 847 ICFPSIIDMKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLV 906

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKL 665
            L L    NL+ +P SI  L  L  L +S C +L++ PE+  N+  L     + T +E L
Sbjct: 907 LLDLKWCKNLKSLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVL 966

Query: 666 PAGLSSMSSVLYVNL 680
           P+ +  +  ++ +NL
Sbjct: 967 PSSIERLKGLILLNL 981



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 32/182 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSF GEDTR NFT HL+  L  K I+TF D ++L RG+ I+  LL  IE S I ++
Sbjct: 27  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHEELRRGEEIAAELLKAIEESRICVV 86

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           I S+ YA SRW                      FY+VDPS+VRKQ  S+    +   +  
Sbjct: 87  ILSKNYARSRWCLDELVKIMGWKKCMGQLVLPIFYQVDPSNVRKQKGSYXEALADHERNA 146

Query: 100 PE----KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            E    K+KRW+ AL     +SG+      PE+ +IEEI + + K L+       K LVG
Sbjct: 147 DEEGMSKIKRWREALWNVGKISGW------PEAHVIEEITSTIWKSLNRELLHVEKNLVG 200

Query: 156 VE 157
           ++
Sbjct: 201 MD 202



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 145/343 (42%), Gaps = 76/343 (22%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPSS  +F++    +I DCK++E                     +P  +  L  +K+L 
Sbjct: 1083 RLPSSFSSFRSLSNLDISDCKLIEG-------------------AIPNGICSLISLKKLD 1123

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N N   IP  I  L+ L  L +  C+ L  +PELP ++  + A NCT+L  LP G S
Sbjct: 1124 LSRN-NFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTAL--LP-GSS 1179

Query: 671  SMSSV-----LYVNLC------------NFLKLDPN-------ELSEIVKDGWMKHSLYE 706
            S+S++     L+ N                L++ P+         S +     M   L E
Sbjct: 1180 SVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLE 1239

Query: 707  ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV-FPAFLK 765
               I  S+ FPG  IP W  HQ++GSS  +K + P     +  + FA C+V+   P  + 
Sbjct: 1240 --NIAFSIVFPGTGIPDWIWHQNVGSS--IKIQLPTDWYSDDFLGFALCSVLEHLPERII 1295

Query: 766  YFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEY 822
               +    D  D            K  GH + W  G I  V S+HV+LG   C+      
Sbjct: 1296 CHLNSDVFDYGD-----------LKDFGHDFHW-TGNI--VGSEHVWLGYQPCSQLRLFQ 1341

Query: 823  FGP----NYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            F      N+ E SF     F+         VKKCG+  +YA+D
Sbjct: 1342 FNDPNEWNHIEISFEAAHRFNSS---ASNVVKKCGVCLIYAED 1381



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP+S+C  K+     +  C  LE  P+    ++NL+ L + GT I  LP S+ RL 
Sbjct: 915  NLKSLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLK 974

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
             +  L L    NL  +   + +L+ L  L +S C +L  LP    NLG L
Sbjct: 975  GLILLNLRKCKNLVSLSNGMCNLTSLETLIVSGCSQLNNLPR---NLGSL 1021


>gi|227438131|gb|ACP30555.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1074

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 227/708 (32%), Positives = 341/708 (48%), Gaps = 107/708 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR  F  HL+  LS++ I TF DD+ +  GD+I+  L   I  S  A++
Sbjct: 16  YDVFISFRGPDTRKIFVGHLYGSLSIRGIFTFKDDRRLEPGDSITDELCQAIRTSRFAVV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YA+S W                      FY V PS VR Q     +       R 
Sbjct: 76  VISKNYATSSWCLDELQLIMELVENKEIEVFPIFYEVKPSDVRHQ-----QLLESFSLRM 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            EK+  WK AL + A+  G +S+    ++ +IEEI  ++  RL +    + + +VG+   
Sbjct: 131 TEKVPGWKKALKDIANRKGMESSKFSDDATMIEEIVQNISSRLLSMLPIRFRDVVGMRAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGIS-KITIAGAVFNKISRHFEGS-YFALNVREAEET 217
           ++ +  LL + S+   ++      G   K TIA  ++      F    YF  NV +    
Sbjct: 191 VKVLSPLLDMDSKDDARIIGIVGTGGIGKTTIAKYLYETHKLGFSPHHYFMENVAKLCRE 250

Query: 218 GGIKDLQKKLLSELSKDGN--MRNIE---SQLN-RLARKKVRIVFDDV------------ 259
            G+  LQ +LLS + ++ N  + ++E    QL  RL   KV +VFDDV            
Sbjct: 251 HGLLHLQNQLLSSIFREKNVMLESVEHGRQQLEFRLRNAKVFLVFDDVDDVRQLDALAKE 310

Query: 260 ----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GGDHLDASHIE 314
                 GSR++ITTRDK +L +C   + Y ++ L    A  LF Q AF GG    + + +
Sbjct: 311 VQWFAPGSRIVITTRDKSLLNSC---EVYDVEYLDDDKALLLFQQIAFKGGQPPSSVYSD 367

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
            + +A K AQG+PLA+K LG  L G+S+  W+ A+R  E  P+  I  +L ISY+SLD+ 
Sbjct: 368 FSSRASKLAQGLPLAVKALGSSLRGKSEMEWDKALRSFEKTPYDNIPRILNISYESLDEL 427

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDMGRE 425
            K  FL +AC   GE    V S+           A KSLI+L    RI MH LL  MGR 
Sbjct: 428 SKTAFLHVACLFNGELVSRVKSLLHRGEDGIRVLAEKSLIDLSTNGRIAMHHLLEKMGR- 486

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
             R ES N    +  LW   DI ++  K  GT   EGI LD+++  R  H++   F +M 
Sbjct: 487 --RNESGNDLSLQPILWQWYDICRLADK-AGTTRTEGIVLDVSE--RPNHIDWKVFMQME 541

Query: 486 KLRFLRFYGDKN-KCMVSHLEGVPFA-----EVRHLEWPQCPLKTL--NICAEKLVSLKM 537
            L++L+ Y  +  K + S  +G P       ++R L+W   P  TL  +I  + LV + +
Sbjct: 542 NLKYLKIYNHRRYKSLDSRTQGNPNEILQPYKLRLLQWDAYPYTTLPSSINTDCLVEVIL 601

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IREL 596
             +K+  LW                              P  L +L+ L + G+  ++EL
Sbjct: 602 CNSKLTTLWSGS---------------------------PPRLSHLKRLNLTGSMYLKEL 634

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           P+ L    +++ L+L    +L RIPESI  L +L  L +S+C+ L+ L
Sbjct: 635 PD-LKEAVYLEELMLEGCISLTRIPESICSLPRLQKLDLSNCDGLKNL 681



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           L +    I E+P+ +  +  +++L LS N     +P S+ HL+KL  + + +C RL+ LP
Sbjct: 806 LNLINLNIEEIPDDIHHMQVLEKLNLSGNF-FRGLPSSMTHLTKLKHVRLCNCRRLEALP 864

Query: 646 ELPCNLGLLSARNCTSLEKL 665
           +L   L  L+  +CT+L  L
Sbjct: 865 QL-YQLETLTLSDCTNLHTL 883



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 32/142 (22%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT------------------- 592
           LPSS+          + +C+ LE LP +L  LE LT+   T                   
Sbjct: 839 LPSSMTHLTKLKHVRLCNCRRLEALP-QLYQLETLTLSDCTNLHTLVSISQAEQDHGKYN 897

Query: 593 -----------IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
                      +  L + L   + +  L +S + + E +P SI+ LS L  L +++C +L
Sbjct: 898 LLELRLDNCKHVETLSDQLRFFTKLTYLDISRH-DFETVPTSIKDLSSLITLCLNYCMKL 956

Query: 642 QTLPELPCNLGLLSARNCTSLE 663
           ++L ELP ++  L +  C SLE
Sbjct: 957 KSLSELPLSIKHLYSHGCMSLE 978



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 573 LERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           +E +PD++ +   LE L + G   R LP S+  L+ +K + L N   LE +P+    L +
Sbjct: 813 IEEIPDDIHHMQVLEKLNLSGNFFRGLPSSMTHLTKLKHVRLCNCRRLEALPQ----LYQ 868

Query: 630 LTFLFISHCERLQTLPELP--------CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           L  L +S C  L TL  +          NL  L   NC  +E L   L   + + Y+++
Sbjct: 869 LETLTLSDCTNLHTLVSISQAEQDHGKYNLLELRLDNCKHVETLSDQLRFFTKLTYLDI 927


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 209/640 (32%), Positives = 330/640 (51%), Gaps = 70/640 (10%)

Query: 127 ESKLIEEIANDVLKRL--DATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGG 184
           E KLIEEI +D+ K+L  + +     + LVG++  +++I+SLL  GS GV  + IWG+GG
Sbjct: 68  EIKLIEEIVSDIQKKLHHEPSPSIDAERLVGMKSRVKDIDSLLSFGSTGVLIVGIWGMGG 127

Query: 185 ISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL--SKDGNMRN--I 240
           I K T A AV+++    FEG  F  NVRE  +  GI  +++++L E+   KD  +R   +
Sbjct: 128 IGKSTTAEAVYHRNCSKFEGHCFFQNVREESQKHGIDHVRQEILGEVLEKKDMTIRTKVL 187

Query: 241 ESQLNR-LARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKN-CWANK 282
              + R L RKKV IV DDV                  GSR+++T+RD+QVL N C  +K
Sbjct: 188 PPAIKRMLQRKKVLIVLDDVNDPQVLKYLLGEDGLFGQGSRIMVTSRDRQVLINECDEDK 247

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGR-S 341
            Y ++ L   DA +LF   AF  ++    +I L+   +   +GVPL L+VLG  L  + S
Sbjct: 248 IYEVEILEEDDALRLFSLHAFKQNNPIEGYIGLSKTVVSCVKGVPLVLEVLGASLYRKTS 307

Query: 342 KEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS 401
            E WES + +L      E+++ L++ Y  L D++K +FLDIACF     RD +    D  
Sbjct: 308 VEYWESKVAQLRTNGCEEVKKCLEMCYHELRDTEKKIFLDIACFFGRCKRDHLQQTLDLE 367

Query: 402 K-----SLINLDLF----YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
           +      LI++ L      +I MHD+L  +G++IV +E+++ P +R+RLW   DIY+VL 
Sbjct: 368 ERSGIDRLIDMCLIKIVQNKIWMHDVLVKLGKKIVHQENVD-PRERSRLWQADDIYRVLT 426

Query: 453 KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY-------GDKNKCMVSHLE 505
                  +E ISL++  +  E+ ++  AF  M  LR L+ Y         K + M     
Sbjct: 427 TQRTGSKVESISLNLLAITEEMILSPTAFEGMYNLRLLKIYYPPFLKDPSKEQIMNGKRV 486

Query: 506 GVPF--------AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRL--- 552
           G+          +E+R L W   PLK++  N   +K   L+MPC+++EQ W++ Q L   
Sbjct: 487 GIHLPGGLHFLSSELRFLYWYNYPLKSMPSNFFPKKPFQLEMPCSQLEQFWNEYQPLEIL 546

Query: 553 -----PSSLCTFKTPITFEIIDCKMLER-LPDELENLEYLTV----KGTTIRELPESLGR 602
                PSS  +      F++   ++L   +P  ++    LT     +  +   LP S+G 
Sbjct: 547 KLMNPPSSKPSLIDSDLFKVPHLEVLHPGIPSSIKYSTRLTTLELPRLESFYTLPSSIGC 606

Query: 603 LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSL 662
           LS + RL LS+  +L  +P++I  L  L  L +  C +L +LP   C L  L+  N   L
Sbjct: 607 LSQLVRLNLSSCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKLKCLTKLN---L 663

Query: 663 EKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWM 700
             LP  +  + S+  ++L  C+ L   PN + E+    W+
Sbjct: 664 ASLPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWL 703



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 39/59 (66%)

Query: 2  YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
          ++VFLSFRG DTR++FTSHL+  L    I  +ID++L  G+ I  +LL  IE   I +I
Sbjct: 14 HEVFLSFRGTDTRNSFTSHLYDALKRNHIDAYIDNKLDGGEKIEPALLERIEEDEIKLI 72



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 30/166 (18%)

Query: 528 CAEKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL 586
           C  +LV L +  C  +  L D++  L       K+ +  ++  C  L  LP+ +  L+ L
Sbjct: 606 CLSQLVRLNLSSCESLASLPDNIDEL-------KSLVELDLYSCSKLASLPNSICKLKCL 658

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           T     +  LP+S+G L  ++ L LS+ S L  +P SI  L  L +L ++ C  L +LP+
Sbjct: 659 T--KLNLASLPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLASLPD 716

Query: 647 LPCNLGLLSA-----------------RNCTSLEKLPAGLSSMSSV 675
              N+G L +                   C+ L  LP+ + ++ S+
Sbjct: 717 ---NIGELKSLQWFDLNGCFGLASFDLNGCSGLASLPSSIGALKSL 759



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 21/207 (10%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT-IRELPESLGRLS 604
            +  LP ++ + K+  +  +  C  L  L D   EL++LE L + G   +  LP+++G L 
Sbjct: 814  LASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLPDNIGTLK 873

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA------RN 658
             +K L L   S L  +P+ I  L  L  L+++ C  L +L +   N+G L +        
Sbjct: 874  SLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTD---NIGELKSLKQLYLNG 930

Query: 659  CTSLEKLP--AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF 716
            C+ L  LP   G      +L +N C+ L   P+ +  +      K   +   G+ K    
Sbjct: 931  CSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDAL--KCLKKLDFFGCSGLAKLASL 988

Query: 717  PGN----EIPKWFRHQSMGSSATLKTR 739
            P N    +  KW +       A+L  R
Sbjct: 989  PDNIGTLKSLKWLKLDGCSGLASLPDR 1015



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT-IRELPESLGRLS 604
           +  LP S+   K+        C  L  LPD    L++L+ LT+ G + +  L + +G L 
Sbjct: 790 LTSLPDSIGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELK 849

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP----ELPCNLGLLSARNCT 660
            +++L L+    L  +P++I  L  L +L +  C  L +LP    EL  +L  L    C+
Sbjct: 850 SLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELK-SLKQLYLNGCS 908

Query: 661 SLEKLPAGLSSMSSV--LYVNLCNFLKLDPNEL 691
            L  L   +  + S+  LY+N C+ L   P+ +
Sbjct: 909 ELASLTDNIGELKSLKQLYLNGCSGLASLPDRI 941



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 9/145 (6%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT-IRELPESLGRLS 604
            +  LP ++ T K+    ++  C  L  LPD   EL++L+ L + G + +  L +++G L 
Sbjct: 985  LASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELK 1044

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
             +K+L L+  S L  +P+ I  L  L  L ++ C  L +LP+    L C L  L    C+
Sbjct: 1045 SLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKC-LKKLDFFGCS 1103

Query: 661  SLEKLPAGLSSMSSVLYVNLCNFLK 685
             L  LP  +  + S+ +  +  FL+
Sbjct: 1104 GLASLPNNIGELESLQFSFVLLFLR 1128



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 564 TFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
           +F++  C  L  LP  +  L+ L      +    +S+  L  +K LI S    L  +P+S
Sbjct: 737 SFDLNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSLPDS 796

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSA------RNCTSLEKLPAGLSSMSSV-- 675
           I  L  L  L+ S C  L +LP+   N+G L +        C+ L  L   +  + S+  
Sbjct: 797 IGALKSLENLYFSGCSGLASLPD---NIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEK 853

Query: 676 LYVNLCNFLKLDPNELSEIVKDGWMK 701
           L +N C  L   P+ +  +    W+K
Sbjct: 854 LELNGCLGLASLPDNIGTLKSLKWLK 879



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 36/182 (19%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTT-IRELPESLGRLS 604
            +  LP ++ T K+    ++  C  L  LPD   EL++L+ L + G + +  L +++G L 
Sbjct: 862  LASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELK 921

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE------------------ 646
             +K+L L+  S L  +P+ I  L  L  L ++ C  L +LP+                  
Sbjct: 922  SLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSG 981

Query: 647  ------LPCNLGLLSA------RNCTSLEKLPAGLSSMSSV--LYVNLCNFLKLDPNELS 692
                  LP N+G L +        C+ L  LP  +  + S+  LY+N C+ L    + + 
Sbjct: 982  LAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIG 1041

Query: 693  EI 694
            E+
Sbjct: 1042 EL 1043


>gi|357500581|ref|XP_003620579.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495594|gb|AES76797.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1594

 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 220/714 (30%), Positives = 366/714 (51%), Gaps = 90/714 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT+ L   L  K I  F DD  L +G++I   LL TIE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTNFLFAALERKGIYAFRDDTNLPKGESIGPELLRTIEGSQVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YASS W                      FY VDPS V+KQS  +   F++  +RF
Sbjct: 80  VLSRNYASSTWCLQELEKICECIKGSGKYVLPIFYGVDPSEVKKQSGIYWDDFAKHEQRF 139

Query: 100 ---PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
              P K+ RW+ AL +   ++G+D    + +S  +E+I   +L  L       +K LVG+
Sbjct: 140 KQDPHKVSRWREALNQVGSIAGWDLRD-KQQSVEVEKIVQTILNILKCKSSFVSKDLVGI 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
               E ++  L + S +GV  + IWG+GGI K T+A  ++ +I   F+ S F  +V +  
Sbjct: 199 NSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKIF 258

Query: 216 ET-GGIKDLQKKLLSEL--SKDGNMRNIESQLN----RLARKKVRIVFDDVT-------- 260
               G  D QK++L +    +   + N  S  +    RL+R+K  ++ D+V         
Sbjct: 259 RLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLERI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR++I +RD+ +LK    +  Y++  L + ++HKLFCQ AF  + +   +
Sbjct: 319 GVHREWLGAGSRIVIISRDEHILKEYKVDVVYKVPLLDWTESHKLFCQKAFKLEKIIMKN 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            + L  + + YA G+PLA+ VLG +L GR+   W+SA+ +L   P+ ++ +VL++SYD L
Sbjct: 379 YQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSALARLRQSPNKDVMDVLQLSYDGL 438

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           ++++K +FLDIACF    +   + +I +               KSLI +     + MH L
Sbjct: 439 EETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSI-VEMHSL 497

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L ++GR+IV++ S     K +R+W  + +Y V  +N   + +E +      +++ +    
Sbjct: 498 LEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENM-EKHVEAVVF-FGGIDKNVEF-- 553

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGV---PFA---EVRHLEWPQCPLKTL--NICAE 530
              S M  LR L    D+   M+++ E V   P++   ++R+++W   P K L  +    
Sbjct: 554 --LSTMSNLRLLIIRHDEYY-MINNYELVMLKPYSLSNKLRYVQWTGYPFKYLPSSFHPA 610

Query: 531 KLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV 588
           +LV L +  + ++QLW + + LP+           ++ D K LE++ D  +  NLE+L +
Sbjct: 611 ELVELILVRSCIKQLWKNKKHLPNLR-------RLDLSDSKKLEKIEDFGQFPNLEWLNL 663

Query: 589 -KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
            +   + EL  S+G L  +  L L    NL  IP +I  LS L +L +S C +L
Sbjct: 664 ERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKL 717



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           +  +P+++  L  ++RL L  N N   +P S+R LS+L +L + HC+ L++LP+LP    
Sbjct: 786 LSHVPDAIECLHRLERLNLGGN-NFVTLP-SMRKLSRLVYLNLEHCKLLESLPQLPFPST 843

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSL------YE 706
           +    +  +      GL     V++    N  KL   E    +   WMK  +      Y 
Sbjct: 844 IGPDYHENNEYYWTKGL-----VIF----NCPKLGERECCSSITFSWMKQFIQANQQSYG 894

Query: 707 ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV 757
               +  +  PG+EIP W  +QSMG S  +   P      N +I F FCAV
Sbjct: 895 PYLYELQIVTPGSEIPSWINNQSMGGSILIDESPVIHDNKNNIIGFVFCAV 945


>gi|227438199|gb|ACP30589.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1104

 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 229/708 (32%), Positives = 342/708 (48%), Gaps = 107/708 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR  F  HL+  LS++ I TF DD+ +  GD+I+  L   I  S  A++
Sbjct: 16  YDVFISFRGPDTRKIFVGHLYGSLSIRGIFTFKDDRRLEPGDSITDELCQAIRTSRFAVV 75

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YA+S W                      FY V PS VR   H     FS    R 
Sbjct: 76  VISKNYATSSWCLDELQLIMELVENKEIEVFPIFYEVKPSDVRH--HQLLESFSL---RM 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            EK+  WK AL + A+  G +S+    ++ +IEEI  ++  RL +    + + +VG+   
Sbjct: 131 TEKVPGWKKALEDIANRKGMESSKFSDDATMIEEIVQNISSRLLSMLPIRFRDVVGMRAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGIS-KITIAGAVFNKISRHFEGS-YFALNVREAEET 217
           ++ +  LL + S+   ++      G   K TIA  ++      F    YF  NV +    
Sbjct: 191 MKVLSPLLDMDSKDDARIIGIVGTGGIGKTTIAKYLYETHKLGFSPHHYFMENVAKLCRE 250

Query: 218 GGIKDLQKKLLSELSKDGN--MRNIE---SQLN-RLARKKVRIVFDDV------------ 259
            G+  LQ +LLS + ++ N  + ++E    QL  RL   KV +VFDDV            
Sbjct: 251 HGLLHLQNQLLSSIFREKNVMLESVEHGRQQLEFRLRNAKVFLVFDDVDDVRQLDALAKE 310

Query: 260 ----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GGDHLDASHIE 314
                 GSR++ITTRDK +L +C   + Y ++ L    A  LF Q AF GG    + + +
Sbjct: 311 VQWFAPGSRIVITTRDKSLLNSC---EVYDVEYLDDDKALLLFQQIAFKGGQPPSSVYSD 367

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
            + +A K AQG+PLA+K LG  L G+S+  W+ A+R  E  P+  I  +L ISY+SLD+ 
Sbjct: 368 FSSRASKLAQGLPLAVKALGSSLRGKSEMEWDKALRSFEKTPYDNIPRILNISYESLDEL 427

Query: 375 QKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRMHDLLRDMGRE 425
            K  FL +AC   GE    V S+           A KSLI+L    RI MH LL  MGR 
Sbjct: 428 SKTAFLHVACLFNGELVSRVKSLLHRGEDGIRVLAEKSLIDLSTNGRIAMHHLLEKMGR- 486

Query: 426 IVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
             R ES N    +  LW   DI ++  K  GT   EGI LD+++  R  H++   F +M 
Sbjct: 487 --RNESGNDLSLQPILWQWYDICRLADK-AGTTRTEGIVLDVSE--RPNHIDWKVFMQME 541

Query: 486 KLRFLRFYGDKN-KCMVSHLEGVPFA-----EVRHLEWPQCPLKTL--NICAEKLVSLKM 537
            L++L+ Y  +  K + S  +G P       ++R L+W   P  TL  +I  + LV + +
Sbjct: 542 NLKYLKIYNHRRYKSLDSRTQGNPNEILQPYKLRLLQWDAYPYTTLPSSINTDCLVEVIL 601

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IREL 596
             +K+  LW                              P  L +L+ L + G+  ++EL
Sbjct: 602 CNSKLTTLWSGS---------------------------PPRLSHLKRLNLTGSMYLKEL 634

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           P+ L    +++ L+L    +L RIPESI  L +L  L +S+C+ L+ L
Sbjct: 635 PD-LKEAVYLEELMLEGCISLTRIPESICSLPRLQKLDLSNCDGLKNL 681



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 586 LTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           L +    I E+P+ +  +  +++L LS N     +P S+ HL+KL  + + +C RL+ LP
Sbjct: 806 LNLINLNIEEIPDDIHHMQVLEKLNLSGNF-FRGLPSSMTHLTKLKHVRLCNCRRLEALP 864

Query: 646 ELPCNLGLLSARNCTSLEKL 665
           +L   L  L+  +CT+L  L
Sbjct: 865 QL-YQLETLTLSDCTNLHTL 883



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 32/142 (22%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT------------------- 592
           LPSS+          + +C+ LE LP +L  LE LT+   T                   
Sbjct: 839 LPSSMTHLTKLKHVRLCNCRRLEALP-QLYQLETLTLSDCTNLHTLVSISQAEQDHGKYN 897

Query: 593 -----------IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
                      +  L + L   + +  L +S + + E +P SI+ LS L  L +++C +L
Sbjct: 898 LLELRLDNCKHVETLSDQLRFFTKLTYLDISRH-DFETVPTSIKDLSSLITLCLNYCMKL 956

Query: 642 QTLPELPCNLGLLSARNCTSLE 663
           ++L ELP ++  L +  C SLE
Sbjct: 957 KSLSELPLSIKHLYSHGCMSLE 978



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 573 LERLPDELEN---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           +E +PD++ +   LE L + G   R LP S+  L+ +K + L N   LE +P+    L +
Sbjct: 813 IEEIPDDIHHMQVLEKLNLSGNFFRGLPSSMTHLTKLKHVRLCNCRRLEALPQ----LYQ 868

Query: 630 LTFLFISHCERLQTLPELP--------CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           L  L +S C  L TL  +          NL  L   NC  +E L   L   + + Y+++
Sbjct: 869 LETLTLSDCTNLHTLVSISQAEQDHGKYNLLELRLDNCKHVETLSDQLRFFTKLTYLDI 927


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 206/627 (32%), Positives = 312/627 (49%), Gaps = 117/627 (18%)

Query: 166 LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQK 225
           LLCIGS  V  + IWG+ GI K TIA  ++ +I   FEG  F  NVRE     G+  LQ 
Sbjct: 29  LLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYKHGLPYLQM 88

Query: 226 KLLSELSKDGN------MRNIESQLNRLARKKVRIVFDDVTS----------------GS 263
           +LLS++ K+         + I    + L  +KV I+ DDV                  GS
Sbjct: 89  ELLSQILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGS 148

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
           R+IITTRD+ +L     +  Y +KEL   +A KLFC +AF   H      +L   A+ Y 
Sbjct: 149 RIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALDYT 208

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIA 383
            G+PLALKVLG  L  +    WES + KL+  P+ E++ VLK S++ LDD+++N+FLDIA
Sbjct: 209 SGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGLDDNEQNIFLDIA 268

Query: 384 CFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
            F +G  +D V  I D+              KSLI +    ++ MHDLL++MG EIVR++
Sbjct: 269 FFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITIS-ENKLCMHDLLQEMGWEIVRQK 327

Query: 431 SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL 490
           S   PG+R+RL  H+DI  VL  NTGTEA+EGI LD+++ ++E++ +  AF+KM +LR L
Sbjct: 328 S-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSE-SKELNFSIDAFTKMKRLRLL 385

Query: 491 RFYG---DKNKCMVSHLEGVPFA---------------------------EVRHLEWPQC 520
           +      D++   +S  E + +                             +R L W   
Sbjct: 386 KICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGY 445

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLWD-----------------------------DV 549
           PLK+   N   EKLV L M  ++++QLW+                             ++
Sbjct: 446 PLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNL 505

Query: 550 QRLPSSLCT-----------FKTPITFEIIDCKMLERLPDE--LENLEYLTVKGTT-IRE 595
           +RL    CT            K  I   +  CK L+       +E+L+ LT+ G + +++
Sbjct: 506 RRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKK 565

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC---NLG 652
            PE    +  +  L L  +  +E +P SI  L+ L FL + +C++L +LP+  C   +LG
Sbjct: 566 FPEIQENMESLMELFLDGSGIIE-LPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLG 624

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVN 679
            L+   C+ L++LP  L S+  +  +N
Sbjct: 625 TLTLCGCSELKELPDDLGSLQCLAELN 651



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 5/116 (4%)

Query: 570 CKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRH 626
           C  L++ P+  EN+E L    + G+ I ELP S+G L+ +  L L N   L  +P+S   
Sbjct: 560 CSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCE 619

Query: 627 LSKLTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
           L+ L  L +  C  L+ LP+   +L  L+  N   + ++++P  ++ ++++  ++L
Sbjct: 620 LTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSL 675


>gi|15240889|ref|NP_198651.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758812|dbj|BAB09346.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006918|gb|AED94301.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 833

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 197/602 (32%), Positives = 321/602 (53%), Gaps = 68/602 (11%)

Query: 130 LIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
           + E+IA DV   L+    S++  GL+G++  ++E+ESLLC+ S+ V  + IWG  GI K 
Sbjct: 1   MTEKIATDVSNMLNNYSPSRDFDGLIGMDAHMKEMESLLCLDSDEVRMIGIWGPSGIGKT 60

Query: 189 TIAGAVFNKISRHFEGSYFALNVRE--------AEETGGIKDLQKKLLSEL--SKDGNMR 238
           TIA  ++++ S +FE S F  N++E        ++E      LQK+ LS++   KD  + 
Sbjct: 61  TIARVLYSQFSENFELSIFMGNIKELMYTRPVCSDEYSAKIQLQKQFLSQIINHKDMELH 120

Query: 239 NIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANK 282
           ++    +RL  KKV IV D +                  GSR+IITT+D+++LK    N 
Sbjct: 121 HLGVAQDRLNDKKVLIVLDSIDQSIQLDAIAKETRWFGHGSRIIITTQDQKLLKAHGINH 180

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y+++     +A+++FC +AFG +  +    EL  +  K    +PL L+V+G +  G S+
Sbjct: 181 IYKVEFPSAYEAYQMFCMYAFGQNFPNDGFEELAWEVTKLLGHLPLGLRVMGSHFRGMSR 240

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV-----ISI 397
             W +A+ +L+I     I+ +LK SYD+L +  K++FL IAC    +   EV     +S 
Sbjct: 241 HEWVNALPRLKIRLDASIQSILKFSYDALCEEDKDLFLHIACLFNNQEMVEVEDYLALSF 300

Query: 398 FD--------ASKSLINLDLF----YRIRMHDLLRDMGREIVR----KESINHPGKRNRL 441
            D        A KSLINL        RI MH+LL  +G++IVR     +SI  PGKR  L
Sbjct: 301 LDVRQGFHLLAEKSLINLKFLSTNCTRIEMHNLLVQLGKDIVRHKPGHQSICEPGKRQFL 360

Query: 442 WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF---YGDKNK 498
              +DI +VL  NTG   + GI L++  ++ +++++  AF  M  L+FLRF   Y D++ 
Sbjct: 361 IDARDICEVLTDNTGNRNVVGIFLEVRNLSCQLNISERAFDGMSNLKFLRFHDPYDDESD 420

Query: 499 CMV--SHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS 554
            +     L  +P  ++R +EW + P+  L  N C + LV ++M  +K++ LW   Q    
Sbjct: 421 KLYLPQGLNNLP-QKLRLIEWSRFPMTCLPSNFCTKYLVEIRMKNSKLQNLWQGNQ---- 475

Query: 555 SLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLIL 611
            L   K     ++ + K L+ LPD     NLEYL + G  ++ ELP S+G+L  +  L L
Sbjct: 476 PLGNLK---RMDLSESKHLKELPDLSTATNLEYLIMSGCISLVELPSSIGKLRKLLMLSL 532

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
              S LE +P +I +L  L +L ++ C  ++  PE+  N+  L     T+++++P+ + S
Sbjct: 533 RGCSKLEALPTNI-NLESLDYLDLTDCLLIKKFPEISTNIKDLKLTK-TAIKEVPSTIKS 590

Query: 672 MS 673
            S
Sbjct: 591 WS 592


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 238/825 (28%), Positives = 375/825 (45%), Gaps = 143/825 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF++FRG++ R NF SHL   L    +  FID    +G +++  L   IE S IA+ +
Sbjct: 19  YQVFVNFRGDELRYNFVSHLTSALLRDGVNIFIDTNEEKGKSLN-VLFERIEESRIALAL 77

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS RY  S+W                      FY+V    VR Q   FG  F++LR    
Sbjct: 78  FSVRYTESKWCLNELLKMKECMDKGQLLIIPIFYKVQAYEVRFQRGRFGYLFNKLRHVDV 137

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL----------DATFQSKN 150
           +K K+W  AL   AD  GF  +    E+K I  I   V + L          ++ F SKN
Sbjct: 138 DKKKQWSEALNSVADRIGFCFDGKSDENKFIHSIVEKVKQALRKIQLDESKGNSVFLSKN 197

Query: 151 KGL---------VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRH 201
             L          G++  ++E+E    +  +    L + G+ GI K T+A  ++      
Sbjct: 198 TSLRLGRENNEIYGLKQRLDELEEKFDLDCQETRYLGVVGMPGIGKTTLARELYETWQCK 257

Query: 202 FEGSYFALNVREAEETGGIKDLQKKLLSELS--KDGNMRN----IESQLNRLARKKVRIV 255
           F       ++R   +  G+  L   LL EL   ++ ++++     ES  + L + KV +V
Sbjct: 258 FVSHVLIQDIRRTSKELGLDCLPALLLEELLGVRNSDVKSSQGAYESYKSELLKHKVLVV 317

Query: 256 FDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
            DDV+                 GSR++I+T DK ++++   +  Y + +L + D    F 
Sbjct: 318 LDDVSDRKQIEVLLGSCDWIRQGSRIVISTSDKSLIQDV-VDYTYVVPQLNHKDGLGHFG 376

Query: 300 QWAFGGDHLDASH-----IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
           ++AF  DH  + H     ++L+ + + Y +G PLALK+LG  L G+ +  W++ +  L  
Sbjct: 377 RYAF--DHHSSKHNNEVIMKLSKEFVHYVRGHPLALKLLGADLNGKDEGYWKTILATLSQ 434

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS------KSLINLD 408
                I +VL+ SY+ L    K +FLD+ACF   E    V S+ D S      K+LIN  
Sbjct: 435 SSCPCIRDVLEESYNELSQEHKEIFLDMACF-RREDESYVASLLDTSEAAREIKTLINKF 493

Query: 409 LF----YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGIS 464
           +      R+ MHDLL    +EI R+         +RLWHH+DI  VLK     E + GI 
Sbjct: 494 MIDVSDGRVEMHDLLYTFAKEICRRAHAQDGKGGHRLWHHQDIIDVLKNIEEGEKVRGIF 553

Query: 465 LDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLE 516
           L+MN++ RE+ ++S  F  M  LR+L+ Y           NK  +      P  EVR+L 
Sbjct: 554 LNMNEMKREMSLDSCTFEPMLGLRYLKIYSSGCPEQCRPNNKINLPDGLNFPVEEVRYLH 613

Query: 517 WPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ----------------RLPSSLCT 558
           W + PLK L  +     LV LK+P +K+E++W D +                R+ S L  
Sbjct: 614 WLEFPLKELPPDFNPRNLVDLKLPYSKIERIWSDDKDTSKLKWVNLNHSSNLRVLSGLSK 673

Query: 559 FKTPITFEIIDCKMLERLPDELENLEYLTVKG----TTIRELPESLGRLSWVKRLILSNN 614
            +      +  C  +E LP +++++  L V      T++  LPE    L  ++ LILSN 
Sbjct: 674 AQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEI--SLVSLETLILSNC 731

Query: 615 SNL--------------------ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           SNL                    +++P  I+ L +L  L +  C +L+  P+   +L  L
Sbjct: 732 SNLKEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKAL 791

Query: 655 SA---RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
                 +C+ L++ PA   S      + +   L+LD   L+EI K
Sbjct: 792 KELILSDCSKLQQFPANGES------IKVLETLRLDATGLTEIPK 830



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 41/274 (14%)

Query: 522  LKTLNICAEKLVSLKMPCTKVEQLWDDVQRL-----------------PSSLCTFKTPIT 564
            LK   + ++ L +L +  T V++L  D++ L                 P  L   K    
Sbjct: 734  LKEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKE 793

Query: 565  FEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIP 621
              + DC  L++ P   + ++ LE L +  T + E+P    ++S ++ L LS N  +  +P
Sbjct: 794  LILSDCSKLQQFPANGESIKVLETLRLDATGLTEIP----KISSLQCLCLSKNDQIISLP 849

Query: 622  ESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS------SV 675
            ++I  L +L +L + +C+ L ++P+LP NL    A  C SL+ +   L+ ++      S 
Sbjct: 850  DNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFDAHGCCSLKTVSNPLACLTTTQQICST 909

Query: 676  LYVNLCNFLKLDPNE--------LSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRH 727
                 CN L++   +          +++ D     ++ +   +  S  FPG+E+P W  H
Sbjct: 910  FIFTSCNKLEMSAKKDISSFAQRKCQLLSDAQNCCNVSDLEPL-FSTCFPGSELPSWLGH 968

Query: 728  QSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFP 761
            +++G    L+ R P     NKL   A CAVV FP
Sbjct: 969  EAVG--CMLELRMPPHWRENKLAGLALCAVVSFP 1000


>gi|449482311|ref|XP_004156244.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1676

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 227/713 (31%), Positives = 338/713 (47%), Gaps = 126/713 (17%)

Query: 8    FRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAIIIFSERY 66
            FRGEDTR  FT HL+  L+ K I TF D+  I  G++I  +LL +I+AS  AI++ SE Y
Sbjct: 663  FRGEDTRGGFTDHLYKALTRKGISTFRDENEIEEGEHIPSNLLASIDASRFAIVVVSEDY 722

Query: 67   ASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE---KMKRW 106
            ASSRW                  FY+VDPSHV+ QS  F   F +  KRF     K++ W
Sbjct: 723  ASSRWCLEELARMFECKKEVLPIFYKVDPSHVKNQSGRFEEAFVKHEKRFGRGDGKVQSW 782

Query: 107  KNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS-KNKGLVGVECSIEEIES 165
            +  LTE A+   + S     ES +IEEI   + KRL       K   LVG+   I ++ S
Sbjct: 783  RTFLTELANTKAWLSQSWSHESNIIEEITTKIWKRLKPNLTVIKEDQLVGINSKINKLSS 842

Query: 166  LLCIGSEG------VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE--AEET 217
            LL   S+       V  + I G+GGI K TIA   + +I   FE   F  NVRE      
Sbjct: 843  LLIPNSDDDDADDDVIFVGIHGMGGIGKTTIARVCYERIRDEFEAHCFLSNVRENYIRTL 902

Query: 218  GGIKDLQKKLLSEL--SKDGNMRNIE---SQLNR-LARKKVRIVFDDVTS---------- 261
            G +  LQ KLLS +   K+ ++ ++E   + +N+ + RKK  +V DDV S          
Sbjct: 903  GNLSCLQTKLLSSMFSLKNNHIMDVEEGTAMINKAIFRKKTLLVLDDVDSSDQIKGLIPD 962

Query: 262  ------GSRVIITTRDKQVLKNCWANKK-YRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSRVIITTR+   L N +  K+ + M EL Y +A +L    AF        ++E
Sbjct: 963  NNSFGNGSRVIITTRNADFLSNEFGVKRIFEMDELKYEEALQLLSLSAFMKTCPKEGYLE 1022

Query: 315  LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIP--HVEIEEVLKISYDSLD 372
             + K +K   G PLALK+LG  L  ++  VW   + ++      H +I + LK+SYD LD
Sbjct: 1023 HSKKIVKVVGGHPLALKLLGSSLRNKNLSVWNEVIEEVGGGGNIHEKIFKCLKVSYDGLD 1082

Query: 373  DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
            + ++ +FLD+ACF  G+ R+ V  I +               KSL+ L    ++ MH+LL
Sbjct: 1083 EREREIFLDVACFFNGKRREVVEEILNGCGFYAKTRIELLIQKSLLTLSYDNKLHMHNLL 1142

Query: 420  RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
            ++MGR+IVR + +     R+RL  HKDI  V                             
Sbjct: 1143 QEMGRKIVRDKHV-----RDRLMCHKDIKSV----------------------------- 1168

Query: 480  AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNI-----CAEKLVS 534
                + +L++++    +      +   +P   ++ LE   C    +NI      AEKL+ 
Sbjct: 1169 ---NLVELKYIKLNSSQKLSKTPNFANIP--NLKRLELEDCT-SLVNIHPSIFTAEKLIF 1222

Query: 535  LKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKG 590
            L +  C        ++  LPS +   K      +  C  ++++P+   N   L  L + G
Sbjct: 1223 LSLKDCI-------NLTNLPSHI-NIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDG 1274

Query: 591  TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            T+I  LP S+  LS +  L L+N   L  I  +I  ++ L  L +S C +L +
Sbjct: 1275 TSISNLPSSIASLSHLTILSLANCKMLIDISNAI-EMTSLQSLDVSGCSKLGS 1326



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 32/298 (10%)

Query: 580  LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
            L +L  L +K   +  +P+ +  +  +  L LS N N   +P SI  L  L  L I+ C+
Sbjct: 1381 LYSLTKLNLKDCNLEVIPQGIECMVSLVELDLSGN-NFSHLPTSISRLHNLKRLRINQCK 1439

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPN-ELSEIVK 696
            +L   P+LP  +  L++++C SL+     + + ++  +  VNL N  ++  N +   ++ 
Sbjct: 1440 KLVHFPKLPPRILFLTSKDCISLKDFIDISKVDNLYIMKEVNLLNCYQMANNKDFHRLII 1499

Query: 697  DGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCA 756
                K  ++  +G    M  PG+EIP WF  + MGSS  ++  P  P     +I FA C 
Sbjct: 1500 SSMQK--MFFRKGTFNIM-IPGSEIPDWFTTRKMGSSVCMEWDPDAPN--TNMIRFALCV 1554

Query: 757  VVVFP--------AFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVES 808
            V+           +        +G+D  D N+        +  +  L   FL  +S ++ 
Sbjct: 1555 VIGLSDKSDVCNVSSFTIIASVTGKDRNDTNL--------KNGDDLLVDAFL--VSGMKK 1604

Query: 809  -DHVFLGCNSFGGEYFG--PNYDEFSFR--IHCSFHFPPYLERGEVKKCGIHFVYAQD 861
             DH+++      G       NY E  FR  +  + +        EVKKCG+  +  ++
Sbjct: 1605 LDHIWMFVLPRTGTLLRKISNYKEIKFRFLLQAANYRQSITPNVEVKKCGVGLINLEE 1662


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 230/761 (30%), Positives = 364/761 (47%), Gaps = 116/761 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF+SFRG DTR+ F  HL+  L  K I TF DD QL +G +IS  LL  I  S ++II
Sbjct: 25  YDVFISFRGSDTRNTFVDHLYAHLIRKGIFTFKDDAQLNKGHSISTQLLHAIRQSRVSII 84

Query: 61  IFSERYASSRW------------------FFYRVDPSHVRKQSHSFGRHF---SRLRKRF 99
           IFS+ YASS W                   FY V PS VRKQ   +   F   S++ K  
Sbjct: 85  IFSKDYASSTWCLDEMATIADCQLNLNHTVFYDVAPSDVRKQKGVYQNVFAVHSKISKHE 144

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           P K+  WK A+T  A  SG+D    +PE + IE+I  +V+  L   F      L+G++  
Sbjct: 145 PHKVDCWKRAMTCLAGSSGWDVRN-KPEFEEIEKIVQEVINSLGHKFSGFVDDLIGIQPR 203

Query: 160 IEEIESLLCIGS--EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
           +E +E LL + S  +G   L I G+GGI K T+   +++KIS  F    F  NV +    
Sbjct: 204 VEALERLLKLRSADDGFRVLGIRGMGGIGKTTLVTVLYDKISYQFHACCFIENVSKIYRD 263

Query: 218 GGIKDLQKKLLSELSKDGNMRNIE-SQLNRLARK-----KVRIVFDDV------------ 259
           GG   +QK++L +  ++ N+     S+++R+ R      K+ +V DD+            
Sbjct: 264 GGCVAVQKQILHQTIREKNLEAYSPSEISRIVRNRLHNIKLLVVLDDIDQIEQLQELHIN 323

Query: 260 ----TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITTRD+ +LK   A+  Y  + +  ++A  L  + AF  D+  ++  EL
Sbjct: 324 PKLLCGGSRIIITTRDEHILKQYGADVVYEAQLMSDSEALDLLHRKAFKSDNSSSTFSEL 383

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVE--IEEVLKISYDSLDD 373
             +                          W + +  L   P ++  I  VL+IS++ L+ 
Sbjct: 384 IPQ--------------------------WRATLDGLRNNPSLDKRIMTVLRISFEGLEP 417

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
            ++ +FL IACF +GE  D V  I D             A KSLI +     I MH +L+
Sbjct: 418 REREIFLHIACFFKGEKADYVRGILDACGLHPDIGIPLIAEKSLITIR-NNEIHMHGMLQ 476

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIH-MNS 478
           ++GR+IV+ +  N P   +RLW ++D ++V+         ++ I LD  +   E + + +
Sbjct: 477 ELGRQIVQGQHPNEPEFWSRLWLYRDFHRVMMTEMKAPIEVKAIVLDQKEDGSEFNKLRA 536

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF---AEVRHLEWPQCPLKTL--NICAEKLV 533
              SK+  L+ L     KN        G P      + +L W   P  +L  NI    LV
Sbjct: 537 EDLSKLGHLKLL-ILCHKN------FSGEPIFLSNSLCYLSWNGFPFDSLPSNIQLHDLV 589

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG- 590
            L MP + ++QLW+ +QRLP   C  +     ++ + K L   P  + ++NLE +   G 
Sbjct: 590 ELNMPDSNIKQLWEGIQRLP---CLKR----MDLSNSKNLRTTPSFEGIQNLERIDFTGC 642

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIP-ESIRHLSKLTFLFISHCERLQTLPE--L 647
             + ++  S+G L+ +  L L N +NL  +   S+  +  L  L +S C  L+  P+  +
Sbjct: 643 INLLQVHPSVGLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRVLRLSGCIGLRNTPDFTV 702

Query: 648 PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
             NL  L    C +L K+   + +++ + +++L +  KL P
Sbjct: 703 AANLEYLDMERCINLSKIDKSIGTLTKLRFLSLRHCTKLFP 743



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 31/200 (15%)

Query: 577 PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
           P  LE+L +L +    I  LP+S+G+L  ++RL L  N +   +P + + L+ L +L +S
Sbjct: 777 PSPLESLIFLDLSFCNISVLPDSIGKLKSLERLNLQGN-HFTTLPSTFKRLANLAYLNLS 835

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL------DPNE 690
           HC RL+ LP+LP   G   + +     K  +G     S LY+  C  L        DP  
Sbjct: 836 HCHRLKRLPKLPTKSG--QSDSVGRYFKTTSGSRDHRSGLYIYDCPKLTKRLFSCEDPG- 892

Query: 691 LSEIVKDGWMKHSLYEERGI-----------KKSMYFPGNE-IPKWFRHQ-SMGSSATLK 737
               V   W+K    E R             +K +   GN  IP+WF ++   GS  T+K
Sbjct: 893 ----VPFKWLKRLFKEPRHFRCGFDIVLPLHRKHIDLHGNPLIPQWFDYKFEKGSIITIK 948

Query: 738 TRPPRPAGYNKLISFAFCAV 757
                   +   + FAFC  
Sbjct: 949 NS----NMHVDWVGFAFCVA 964


>gi|357500587|ref|XP_003620582.1| Elongation factor Ts [Medicago truncatula]
 gi|355495597|gb|AES76800.1| Elongation factor Ts [Medicago truncatula]
          Length = 1245

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 230/715 (32%), Positives = 363/715 (50%), Gaps = 92/715 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVF++FRGEDTR+NFT  L   L  K I  F DD  L +G++I   LL  IE S + + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALQTKGIIVFSDDTNLPKGESIGPELLRAIEGSQVFVA 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASS W                      FY VDPS VRKQS  +G  F +  +RF
Sbjct: 80  VFSINYASSTWCLQELEKICECVKGSGKHVLPVFYDVDPSDVRKQSGIYGEAFIKHEQRF 139

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            +   K+ +W++AL +   +SG+D    +P++  I++I   +L  L       +K LVG+
Sbjct: 140 QQEFQKVSKWRDALKQVGSISGWDLRD-KPQAGEIKKIVQTILNILKYKSSCFSKDLVGI 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE 215
           +  ++ +++ L + S + V  + I G+GGI K T+A A++++IS  F  S F  +V +  
Sbjct: 199 DSRLDGLQNHLLLDSVDSVRAIGICGMGGIGKTTLAMALYDQISHRFSASCFIDDVSKIY 258

Query: 216 ET-GGIKDLQKKLL-----SELSKDGNMRNIESQL-NRLARKKVRIVFDDVT-------- 260
           +   G  D QK++L      E  +  N  ++ + + +RL R++V ++ D+V         
Sbjct: 259 KLHDGPLDAQKQILLQTLGIEHHQICNHYSVTNLIRSRLCRERVLLILDNVDQVAQLEKI 318

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +GSR+II +RD+ +LK    +  Y++  L + D+HKLFCQ AF  + +  S+
Sbjct: 319 GVHREWLGAGSRIIIISRDEHILKYYGVDAVYKVPLLNWTDSHKLFCQKAFKFEKVIMSN 378

Query: 313 IE-LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            E L  + + YA G+PLA+ VLG +L GR+   W+SA+ +L   P+ +I +VL++S+D L
Sbjct: 379 YENLAYEILDYANGLPLAIIVLGSFLFGRNVTEWKSALARLRESPNNDIMDVLQLSFDGL 438

Query: 372 DDSQKNVFLDIACFLE--------------GEHRDEVISIFDASKSLINLDLFYRIRMHD 417
           + ++K +FL IACF                G H D  +S+ +  KSLI+L     I MH 
Sbjct: 439 EHTEKEIFLHIACFFSYSSKEYVKNILNCCGFHADIGLSVLN-DKSLISLGE-STIIMHS 496

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL--KKNTGTEAIEGISLDMNKVNREIH 475
           LL ++GR+IV++ S     K +R+W  K +  V   K     EAIE  S +   V     
Sbjct: 497 LLEELGRKIVQENSSKERRKWSRVWSEKQLNNVTMEKMEKHVEAIELWSYEEVVVEH--- 553

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLV 533
                 +KM  LR L     +N  +   L  +  A +R++EW   P K L  +     L+
Sbjct: 554 -----LAKMSNLRLLIIKCGRN--IPGSLSSLSNA-LRYVEWDGYPFKCLPTSFHPNDLI 605

Query: 534 SLKMPCTKVEQLWDDVQRLPS--SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG- 590
            L +  + ++QLW + + LP+   L    +    +I+D         E  NLE+L ++G 
Sbjct: 606 ELILMNSDIKQLWKNKKYLPNLRRLGLSYSRKLLKIVDF-------GEFPNLEWLNLEGC 658

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
             + EL  S+G L  +  L L N  NL  IP +I  L  L  L +  C ++   P
Sbjct: 659 KNLVELDPSIGLLRKLVYLNLKNCKNLVSIPNNIFDLCSLEDLNMRGCSKVFNNP 713



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 22/254 (8%)

Query: 593  IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
            +R++P+++  L W++RL L  N N   +P S+R LSKL +L + HC+ L++LP LP    
Sbjct: 769  LRQVPDAIECLHWLERLDLGGN-NFVTLP-SLRKLSKLVYLNLEHCKLLESLPRLPS--P 824

Query: 653  LLSAR-----NCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE 707
              S R     N T +     G+    + L +  C  L     E    +   WM   +   
Sbjct: 825  PTSGRDQQENNNTFIGLYDFGIVRKITGLVIFNCPKLADCERERCSSLTFSWMIQFIMAN 884

Query: 708  RGIKKSMYF---PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV--VVFPA 762
                 + +    PG+EIP W  +QSMG S  ++      A ++  I F  C V  V    
Sbjct: 885  PQSYLNEFHIITPGSEIPSWINNQSMGDSIPIEF---SSAMHDNTIGFVCCVVFSVAPQV 941

Query: 763  FLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEY 822
               +FR    + D    +       K     HL+  FL + SY + +++   C    GE 
Sbjct: 942  STVWFRIMCIDLDIPVTIKGSLITTK---SSHLWMIFLPRGSYDKFENI--CCYDVLGEG 996

Query: 823  FGPNYDEFSFRIHC 836
             G       +R  C
Sbjct: 997  LGMEVKSCGYRWIC 1010


>gi|147833151|emb|CAN75296.1| hypothetical protein VITISV_010423 [Vitis vinifera]
          Length = 849

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 251/819 (30%), Positives = 361/819 (44%), Gaps = 219/819 (26%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFT+HL   L  K I TFID++ L RG  +S +L+  IE S  +II
Sbjct: 15  YDVFLSFRGEDTRNNFTAHLCEELHTKGINTFIDEEKLERGQAVSAALVSAIENSMFSII 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YASSRW                      FY V PS VR     FG   ++  +  
Sbjct: 75  VLSENYASSRWCLEELVKIIQCMKNRGHRVLPIFYNVAPSDVRNHKGKFGEALAKHEENS 134

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E M+R   WK+ALT+  + SG+DS   + ES LI++I  D+L +L              
Sbjct: 135 KEGMERVQIWKDALTQVTNFSGWDSRN-KNESLLIKQIVKDILNKL-------------- 179

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
                       + S G     IWG+GGI K T+  AV+++IS  FEG  F  NV E  +
Sbjct: 180 ------------LSSSG-----IWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEGLK 222

Query: 217 TGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQV 274
             G+  LQ+KLLS L   ++ NM+ + S   RL  KKV I          V+    D  +
Sbjct: 223 KKGLIGLQEKLLSHLLEEENLNMKELTSIKARLHSKKVLI----------VLDNVNDPTI 272

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT--DKAIKYAQGVPLALKV 332
           L+    N+ +                  FG      S I +T  DK +  +  V L    
Sbjct: 273 LECLIGNRDW------------------FG----QGSRIIITTRDKRLLLSHKVNL---- 306

Query: 333 LGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRD 392
              Y   +  +        LE + H E               +KN+FLDIACFL+ E ++
Sbjct: 307 ---YKVHKFNDD-----EALEFLAHFE---------------EKNIFLDIACFLKREDKN 343

Query: 393 EVISIFDASKSLINLDLFYRIRMHDLLRD----MGREIVRKESINHPGKRNRLWHHKDIY 448
            +  I D          F+ +     L D    MG EIVR+ES + PG+R+RLW HKDI 
Sbjct: 344 YIKEILDYCG-------FFSVSGIRALVDKSLKMGMEIVRQES-HTPGQRSRLWLHKDIN 395

Query: 449 QVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY---------GD---K 496
             LKKN   E IEGI LD++     I  ++ AF +M KLR L+ Y         GD   K
Sbjct: 396 DALKKNMENEKIEGIFLDLSHSQEIIDFSTQAFPRMYKLRLLKVYESNKISRNXGDTLNK 455

Query: 497 NKCMVSHLEGVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRL 552
             C V     + F   E+R+L      LK+L  +  A+ LV L M  + +++LW  +   
Sbjct: 456 ENCKVHFSPNLRFCYDELRYLYLYGYSLKSLDNDFNAKNLVHLSMHYSHIKRLWKGI--- 512

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILS 612
                             K+LE+L  ++ +L +      ++ E P+   R+  ++RL+L 
Sbjct: 513 ------------------KVLEKL--KVMDLSH----SKSLIETPD-FSRVPNLERLVLE 547

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA---RNCTSLEKLPAGL 669
              +L ++  S+  L+KL FL + +CE+L++LP   C+L  L       C+ LE  P   
Sbjct: 548 GCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENF 607

Query: 670 SSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQS 729
            ++                  L E+  DG                  PG+ IP W R+QS
Sbjct: 608 GNLEM----------------LKELHADG-----------------IPGSRIPDWIRYQS 634

Query: 730 MGSSATLKTRPPRPAGYNKL------ISFAFCAVVVFPA 762
            G        PP     N L      +++ F + V+ P 
Sbjct: 635 SGCXVEADL-PPNWYNSNLLGLALSFVTYVFASNVIIPV 672


>gi|12003378|gb|AAG43546.1|AF211528_1 Avr9/Cf-9 rapidly elicited protein 4 [Nicotiana tabacum]
          Length = 536

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 192/521 (36%), Positives = 283/521 (54%), Gaps = 74/521 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTSHL+ VL+ + IKTF DD+ +  G  IS+ L   IE S  +I+
Sbjct: 11  YDVFLSFRGEDTRKTFTSHLYEVLNDRGIKTFQDDKRLEYGATISEELCKAIEESQFSIV 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           IFS+ Y +SRW                      FY VDPSHVR Q  SF + F     ++
Sbjct: 71  IFSKNYTTSRWCMNELVKIMECKTQFGQIVIPIFYDVDPSHVRNQKESFAKAFEEHVTKY 130

Query: 100 P---EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
               E ++RW+ ALT AA+L G   N  + +++ I  I   +  +L     S  + +VG+
Sbjct: 131 KDDVEGIQRWRIALTAAANLKGSCDNRDKTDAECIRHIVGQISSKLCKISLSYLQNIVGI 190

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKI------SRHFEGSYFALN 210
           +  +E+IESLL IG   V  + +WG+GG+ K TIA A+F+ +      S  F+G+ F  +
Sbjct: 191 DTHLEKIESLLEIGINDVRIMGMWGMGGVGKTTIARAMFDTLLGRRDSSYQFDGACFLKD 250

Query: 211 VREAEETGGIKDLQKKLLSELSKD-GNMRNIE----SQLNRLARKKVRIVFDDVT----- 260
           ++E +    +  LQ  LLS L ++  N +N E       +RL  KKV IV DD+      
Sbjct: 251 IKENKHR--MHSLQNILLSNLLREKANYKNEEDGKHQMASRLRSKKVLIVLDDIDDKDHY 308

Query: 261 ------------SGSRVIITTRDKQVL-KNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                       +GSR+I+TTRDK ++ KN   +  Y +  L   ++ +LF Q AF  + 
Sbjct: 309 LEYLAGDLDWFGNGSRIIVTTRDKHLIGKN---DVIYEVTALPDHESIQLFYQHAFKKED 365

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
            D    EL+ + + Y +G+PLAL VLG  L  R   VW+SA+ +++  P+ +I E LKIS
Sbjct: 366 PDECFKELSLEVVNYTKGLPLALGVLGSSLYNRDITVWKSAIEQMKNNPNSKIVEKLKIS 425

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIR 414
           YD L+ +Q+ +FLDIACF  G+ +D+++ +  +              KSL+ +     I 
Sbjct: 426 YDGLESTQQEIFLDIACFFRGKKKDDIMQVLKSCHFGAEYGLDVLIEKSLVFITEDGEIE 485

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           MHDL+++MGR IV  +     GK +RLW  KD  +V+  NT
Sbjct: 486 MHDLIQEMGRYIVNLQK--DLGKCSRLWLAKDFEEVMINNT 524


>gi|297837267|ref|XP_002886515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332356|gb|EFH62774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1028

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 241/840 (28%), Positives = 379/840 (45%), Gaps = 125/840 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL    +   I  F D  + R   I+ +L   I  S IAI++
Sbjct: 13  YRVFASFHGPDVRKTFLSHLRKQFNYNGITMFDDQGIERSQTIAPALTRAINESRIAIVV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YASS W                      FY VDP  VRKQ+  FGR F+    R  
Sbjct: 73  LSKNYASSSWCLDELVQILKCKEDRGQIVMTVFYGVDPHDVRKQTGDFGRAFNETCARKT 132

Query: 101 EKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E+ +R W  AL    +++G        E+K+IE+IA DV  +++AT       +VG+E  
Sbjct: 133 EEERRKWSQALNYVGNIAGEHFRNWDNEAKMIEKIARDVSDKVNATPSRDFDDMVGLETH 192

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA----- 214
           +  ++SLL + ++GV  + I G  GI K TIA A+ N  S  F+ S F  N R +     
Sbjct: 193 LRMMQSLLDLDNDGVMMVGISGPAGIGKTTIARALKNLFSNRFQLSCFMDNFRGSYPIGF 252

Query: 215 EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----------- 261
           +E G    LQ++LLS++     MR  ++     RL   KV I+ DDV             
Sbjct: 253 DEYGFKLRLQEELLSKILNQSGMRISHLGVIQERLCDMKVLIILDDVNDVKQLEALVNEN 312

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSR+I+TT +K++L     +  Y +      +A K+ C++AF       S + + 
Sbjct: 313 SWFGPGSRIIVTTENKEILHRHGIDNVYNVGFPSDEEALKILCRYAFKQSSPRHSFLMMA 372

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
               +    +PL L+V+G  L G++++ W+  +R+LE I   EIEEVL++ Y+SL ++++
Sbjct: 373 KWVAQLCGNLPLGLRVVGSSLHGKNEDEWKYIVRRLETIMDGEIEEVLRVGYESLHENEQ 432

Query: 377 NVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMG 423
            +FL IA F   E  D V ++                +KSLI++     I MH+LL+ MG
Sbjct: 433 TLFLHIAIFFNYEDGDLVKAMLADNSLDIEHGLKILINKSLIHISSKGEILMHNLLQQMG 492

Query: 424 REIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSK 483
           R+ +R++    P KR  L   ++I  VL+ NT     E   +D     R +   +Y    
Sbjct: 493 RQAIRRQ---EPWKRRILIDAQEICDVLENNTNAHIPE--EMDYLPPLRLLRWEAYPSKT 547

Query: 484 MPKLRF----LRFYGDKNKCMVSHLEGVPFAE-------VRHLEWPQCP-------LKTL 525
           +P LRF    L     ++  +    EG             R LE  + P       L+TL
Sbjct: 548 LP-LRFCPENLVELSMEDSQLKKLWEGTQLLTNLKKMDLSRSLELKELPDLSNATNLETL 606

Query: 526 NICA-EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITF------EIIDCKMLERLPD 578
            +     LV L      +++L D +      L    T I         +  C  L   P+
Sbjct: 607 ELSGCTSLVELPSSIANLQKLEDIMMNSCQKLEVIPTNINLTSLKRIHMAGCSRLASFPN 666

Query: 579 ELENLEYLTVKGTTIRELPESL------------GRLSW---------VKRLILSNNSNL 617
              N+  L +  T++  LP  +            GR  +         V RL LS  +++
Sbjct: 667 FSTNITALDISDTSVDVLPALIVHWSHLYYIDIRGRGKYKNASNFPGCVGRLDLSY-TDV 725

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
           ++IP+ I+ L  L  +++S C +L +LPELP  L LL A NC  LE++   ++S ++ L 
Sbjct: 726 DKIPDCIKDLLWLQRIYLSCCRKLTSLPELPNWLLLLIADNCELLERVTFPINSPNAELI 785

Query: 678 VNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLK 737
              C   KLD       ++  ++ + +            PG  +P  F H++ G+S  ++
Sbjct: 786 FTNC--FKLDGETRKLFIQQSFLSNCI------------PGRVMPSEFNHRAKGNSVMVR 831


>gi|224061206|ref|XP_002300370.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222847628|gb|EEE85175.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 503

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 186/514 (36%), Positives = 268/514 (52%), Gaps = 74/514 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR NFT HL+  L    I TF DD  IR G+NI   L   I+ S I+II
Sbjct: 1   YQVFLSFRGADTRKNFTDHLYKALIQAGIHTFRDDDEIRRGENIDFELQKAIQQSKISII 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS+ YASSRW                      FY VDPS V +Q+ SF   F    K F
Sbjct: 61  VFSKDYASSRWCLDELVMIMERKRNDDCIVLPVFYDVDPSQVGRQTGSFAAAFVEHEKSF 120

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E+ +R   W+ AL E ADL+G    V+    E++ ++ I   V K LD          +
Sbjct: 121 NEEKERVSGWRIALKEVADLAGM---VLGDGYEAQFVQSIVEKVSKNLDRKLFHVPLHFI 177

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G +  +  I S L  GS  V    ++GIGG+ K TIA +VFN+    FEG  F    R  
Sbjct: 178 GRDPLVNYINSWLQDGSHDVVIAILYGIGGVGKTTIAKSVFNQNIHKFEGKSFLSKFRSK 237

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQ-----LNRLARKKVRIVFDDVTS-------- 261
           +    I  LQ++L+S++ K     N E +      + L  +++ IV DDV          
Sbjct: 238 D----IVCLQRQLISDILKKTVEINDEDEGILKIKDALCCRRILIVLDDVDKRDQFNKII 293

Query: 262 --------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   GS++I+TTR+K +   N     + +++ L    + +LF   AFG  H     
Sbjct: 294 GMQNWLCKGSKIIVTTRNKGLFSANDIEGVRCKVEPLDDEKSLELFSWNAFGQAHPVDGF 353

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +E + + + +  G+PLAL V+G  L G+ +E+WESA++++E+IP+ E+++VL+ISYD LD
Sbjct: 354 VEDSWRIVHHCNGLPLALGVIGSSLSGKGREIWESALKQMEVIPNFEVQKVLRISYDFLD 413

Query: 373 -DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
            D  KN+FLDIACF  G   D+   I D               + L+ ++++ ++ MH L
Sbjct: 414 GDYPKNLFLDIACFFNGMDVDDAARILDGLDKGARFGIDNLIDRCLVEINVYQKLWMHQL 473

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
           +RDMGREI R+ES     K  R+W H+D + VLK
Sbjct: 474 VRDMGREIARQES----PKCQRIWLHEDAFTVLK 503


>gi|357499903|ref|XP_003620240.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495255|gb|AES76458.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 572

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 198/560 (35%), Positives = 287/560 (51%), Gaps = 112/560 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FTS+L   L  K ++TF+DD+ L +G+ I+ SLL  IE S IAI+
Sbjct: 12  YDVFLSFRGEDTRYGFTSYLKKALDDKGVRTFMDDEELQKGEEITPSLLKAIEDSQIAIV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S+ YASS +                      FY+VDPS +RK   S+G    + +   
Sbjct: 72  VLSKNYASSSFCLQELSHILHSIKDKGRSVLPVFYKVDPSVIRKLEKSYGEAMDKHKAN- 130

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIR---------------------------------- 125
              + +WK  L + ADLSGF     R                                  
Sbjct: 131 -SNLDKWKVCLHQVADLSGFHYKKKRLYLRVLRGRKGKTKKGKGRKGREGRKEGKHSPCL 189

Query: 126 ------PESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEG-VCKLR 178
                 PE K I EI   VL  ++          VG+E   + + SLL +GS+   C + 
Sbjct: 190 GVKKDMPEHKFIGEIVEKVLGNIEPVALPVGDYKVGLEHQKQHVISLLNVGSDDKACMVG 249

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR 238
           I+GIGGI K T+A +V+N I+  FE S F  NVRE+ E  G+  LQK +LS++   G  +
Sbjct: 250 IYGIGGIGKTTLAISVYNLIANEFEVSCFVENVRESHEKHGLPYLQKIILSKVV--GEKK 307

Query: 239 NIESQLN-------RLARKKVRIVFDDVTS----------------GSRVIITTRDKQVL 275
            + S LN        L +KK+ ++ DDV                   SR+IITTRDK++L
Sbjct: 308 ELTSVLNGISKLEQMLKQKKILLILDDVNELEQLEALAGKHEWFNRSSRIIITTRDKRLL 367

Query: 276 KNCWANKKYRMKELVYADAHKLFCQWAFGGD------HLDASHIELTDKAIKYAQGVPLA 329
                  KY +K L   DA +L  + AF  +      ++    + + ++ + YA G PLA
Sbjct: 368 TCHGIECKYEVKGLNDIDAAELVRRKAFKDEFSPSYKNVSTEKMHVLERVVTYASGHPLA 427

Query: 330 LKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG- 388
           L+V+G +   ++ E  + A+ + E IPH +I+  L++S+D+L+D +K VFLDIAC  +G 
Sbjct: 428 LEVMGSHFSNKTIEQCKDALDRYEKIPHKKIQMTLQVSFDALEDEEKFVFLDIACCFKGW 487

Query: 389 -----------EHRDEV---ISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINH 434
                       H D +   I++    KSLI +D F  + +HDLL DMG+EIVR+ES N+
Sbjct: 488 KLTRVEEILHVHHGDNMKDHINVL-VEKSLIKIDGFGYVALHDLLEDMGKEIVRQESPNN 546

Query: 435 PGKRNRLWHHKDIYQVLKKN 454
           PG+R+RLW  KDI +VL++N
Sbjct: 547 PGERSRLWDPKDIQKVLEEN 566


>gi|357499487|ref|XP_003620032.1| Resistance-gene protein [Medicago truncatula]
 gi|355495047|gb|AES76250.1| Resistance-gene protein [Medicago truncatula]
          Length = 533

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 187/519 (36%), Positives = 277/519 (53%), Gaps = 67/519 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD  L RGD I+ SL   IE S I I 
Sbjct: 11  YQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIP 70

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YASS +                      F  VDP+ VR  +  +G   +  +K+F
Sbjct: 71  VFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKF 130

Query: 100 ------PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
                  E++++WK AL++AA+LSG        E + I +I  D+  R+        K  
Sbjct: 131 QNDKDNTERLQQWKEALSQAANLSG-QHYKHGYEYEFIGKIVEDISNRISREPLDVAKYP 189

Query: 154 VGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  ++ ++  L   S+  V  + ++G GGI K T+A A++N I+  FE   F  NVR
Sbjct: 190 VGLQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVR 249

Query: 213 EAEETGGIKDLQKKLLS-----ELSKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
               +  +K LQ+KLL      ++   G  + I     RL RKK+ ++ DDV        
Sbjct: 250 VNSTSDNLKHLQEKLLLKTVRLDIKLGGVSQGIPIIKQRLCRKKILLILDDVDKLDQLEA 309

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSRVIITTR+K +LK       + ++ L   +A +L  +W    +++ +S
Sbjct: 310 LAGGLDWFGPGSRVIITTRNKHLLKIHGIESTHAVEGLNATEALELL-RWMAFKENVPSS 368

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           H ++ ++A+ YA G+PLA+ ++G  L GRS +   S +   E IP+ EI+ +LK+SYDSL
Sbjct: 369 HEDILNRALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVSYDSL 428

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD--------------ASKSLIN-LDLFYRIRMH 416
           +  +++VFLDIAC  +G    EV  I                A KSL++ L     + +H
Sbjct: 429 EKEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSYVTLH 488

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           DL+ DMG+E+VR+ES + PG+R+RLW  +DI  VLKKNT
Sbjct: 489 DLIEDMGKEVVRQESPDEPGERSRLWFERDIVHVLKKNT 527


>gi|297805922|ref|XP_002870845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316681|gb|EFH47104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 836

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 217/767 (28%), Positives = 356/767 (46%), Gaps = 155/767 (20%)

Query: 130 LIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
           + E+IA DV   L+    S++  GL+G+   ++E+ESLLC+ S+ V  + IWG  GI K 
Sbjct: 1   MTEKIATDVSDMLNRYSPSRDFDGLIGMGAHMKEMESLLCLDSDEVRMIGIWGPSGIGKT 60

Query: 189 TIAGAVFNKISRHFEGSYFALNVRE--------AEETGGIKDLQKKLLSEL--SKDGNMR 238
           TIA  ++++ S +FE S F  N++E        ++E      LQK+ LS++   KD  + 
Sbjct: 61  TIARVLYSQFSENFELSIFMENIKELMYTRPVCSDEYSAKIQLQKQFLSQIINHKDMELP 120

Query: 239 NIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANK 282
           ++    +RL  K+V IV D +                  GSR+IITT+D+++LK    N 
Sbjct: 121 HLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWFGHGSRIIITTQDQRLLKAHGINH 180

Query: 283 KYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            Y+++     +A+++FC +AFG +       EL  +  K    +PL L+V+G +  G S+
Sbjct: 181 IYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMSR 240

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEH----RDEVISIF 398
             W +A+ +L+I     I+ +LK SYD+L +  K++FL IAC    E      D + S F
Sbjct: 241 HEWVNALPRLKIRLDASIQSILKFSYDALCEEDKDLFLHIACLFNDEEMVRVEDYLASSF 300

Query: 399 ---------DASKSLINLDLF----YRIRMHDLLRDMGREIVR----KESINHPGKRNRL 441
                     A KSLI +++F     RI+MH+LL  +GR+IVR     +SI  PGKR  L
Sbjct: 301 LDVRQGLHLLAEKSLIAIEIFSTNHTRIKMHNLLVQLGRDIVRHKPGHQSIREPGKRQFL 360

Query: 442 WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG-----DK 496
              +DI +VL  NTG+  + GI  ++  ++ E++++  AF  +  L+FLRF+G      K
Sbjct: 361 VDARDICEVLTDNTGSRNVIGILFELYNLSGELNISERAFEGLSNLKFLRFHGPYDGEGK 420

Query: 497 NKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ---- 550
              +   L  +P  ++R +EW   P+K L  N C + LV + M  +K++ +W   Q    
Sbjct: 421 QLYLPQGLNNLP-RKLRLIEWSCFPMKCLPSNFCTKYLVHIDMWNSKLQNMWQGNQVLGN 479

Query: 551 ------------------------------------RLPSSLCTFKTPITFEIIDCKMLE 574
                                                LPSSL   +      +  C  LE
Sbjct: 480 LKRMDLWESKHLKELPDLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLE 539

Query: 575 RLPDELE-----------------------NLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
            LP  +                        N++ L +  T I+E+P ++   S ++ L +
Sbjct: 540 ALPTNINLESLDDLDLADCLLIKSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRNLEM 599

Query: 612 SNNSNLERIPESIRHLSKLTF--------------------LFISHCERLQTLPELPCNL 651
           S N NL+  P ++  ++KL F                    L +  C+RL T+P+L  +L
Sbjct: 600 SYNDNLKEFPHALDIITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSL 659

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
             ++A NC SLE+L     +   +L +   N  KL+ NE  E ++               
Sbjct: 660 SNVTAINCQSLERLDFSFHNHPKIL-LWFINCFKLN-NEAREFIQTSC------------ 705

Query: 712 KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
              + PG E+P  F +++ GSS  +     RP   +  + F  C ++
Sbjct: 706 TFAFLPGREVPANFTYRANGSSIMVNLNQRRP--LSTTLRFKACVLL 750


>gi|262316877|emb|CAZ44326.1| putative disease resistance protein [Raphanus sativus]
          Length = 1040

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 246/838 (29%), Positives = 384/838 (45%), Gaps = 141/838 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F +HL    +   I  F D  + RG  I+ +L   I  S I+I++
Sbjct: 116 YRVFTSFHGPDVRKTFLTHLRKQFNCNGISMFDDQGIERGQTIAPALTQAIRESRISIVV 175

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            ++ YASSRW                      FY VDPS VRKQ+  FG+ F    R + 
Sbjct: 176 LTKHYASSRWCLDELLGILKCKEEMGQIVMTIFYGVDPSDVRKQTGDFGKVFKETCRGKT 235

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ +RW  +LT+  +++G    +   ES++IE+IA DV  +L+ T     + +VG+E  
Sbjct: 236 EEERRRWSQSLTDVGNIAGEHFLIWDKESEMIEKIARDVSNKLNTTISRDFEDMVGIEAH 295

Query: 160 IEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
           +++++SLL +  E G   + I G  GI K TIA A+ +++S  F  + F  N+R +    
Sbjct: 296 LDKMQSLLHLHDEDGAMFVGICGPAGIGKTTIARALHSRLSSSFHLTCFMENLRGSCNSG 355

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
            +E G    LQ+ LLS++     MR  ++ +   RL  +KV I+ DDV            
Sbjct: 356 LDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLQQLEALADE 415

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH--I 313
                 GSRVI+TT D+++L+    N  Y +       A ++FC++AF    L A H   
Sbjct: 416 TNWFGPGSRVIVTTEDQELLEQHDINNTYNVDFPTQVVARQIFCRFAF--RQLSAPHGFE 473

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L D+ IK    +PL L+V+G  L  +  + WE  +++LE     +I+ VL++ Y+SL  
Sbjct: 474 KLVDRVIKLCSNLPLGLRVMGSSLRRKKIDDWEGILQRLENSFDQKIDAVLRVGYNSLHK 533

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLR 420
             + +FL IACF   +  D V ++   S             KSLI +     I MH LL+
Sbjct: 534 DDQFLFLLIACFFNYKDDDHVKAMLVDSNLDVRLGLKNLVYKSLIQISAEGTIVMHKLLQ 593

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYA 480
            +GRE V    +  P KR  L     I  VL+ ++    ++ + L  +   +E+   S A
Sbjct: 594 QVGREAVH---LQEPRKRQILIDAHQICDVLENDSPLTNLKKMDLSGSLSLKEVPDLSNA 650

Query: 481 FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMP-C 539
            S    L+ L   G    C                 W    + +      KL  L+M  C
Sbjct: 651 TS----LKRLNLTG----C-----------------WSLVEIPSSIGDLHKLEELEMNLC 685

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPES 599
             VE           +L    +  +  ++ C  L ++PD   N++ L +  T ++E PES
Sbjct: 686 VSVEVF--------PTLLNLASLESLRMVGCWQLSKIPDLPTNIKSLVIGETMLQEFPES 737

Query: 600 L------------GRLSWVKRLILSNN-----SNLERIPESIRHLSKLTFLFISHCERLQ 642
           +            G +  V+ L  ++      + +ERIP+ I+  + L FL+I+ C +L 
Sbjct: 738 VRLWSHLHSLNIYGSVLTVRLLETTSQEFSLAATVERIPDWIKDFNGLRFLYIAGCTKLG 797

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
           +LPELP +L  L   NC SLE +    S   +  Y+   N  K     L +  K    + 
Sbjct: 798 SLPELPPSLRKLIVDNCESLETV-CFPSDTPTTDYLYFPNCFK-----LCQEAKRVTTQQ 851

Query: 703 SLYEERGIKKSMYFPGNEIP--KWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           SL          YFPG E+P  ++  H+S GSS T+     RPA    +  F  C V+
Sbjct: 852 SL--------RAYFPGKEMPAAEFDDHRSFGSSLTI----IRPA----ICKFRICLVL 893


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
          Length = 1384

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 227/793 (28%), Positives = 379/793 (47%), Gaps = 127/793 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDN-ISQSLLGTIEASCIAII 60
           +DVFLSF+  D R  FT  L+ VL  + ++ + +D + RG++ +  SL+  +E S   ++
Sbjct: 16  WDVFLSFQ-RDARHKFTERLYEVLVKEQVRVWNNDDVERGNHELGASLVEAMEDSVALVV 74

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YA S W                      FY V+P  +RKQ+  +   F    KRF
Sbjct: 75  VLSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEPCMLRKQNGPYEMDFEEHSKRF 134

Query: 100 PE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E K++RW+ AL    ++ GF  +    +  +IE +   VL  L  T +   + +VG+E 
Sbjct: 135 SEEKIQRWRRALNIIGNIPGFVYSKDSKDDDMIELVVKRVLAELSNTPEKVGEFIVGLES 194

Query: 159 SIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AEE 216
            ++++  L+    S GV  L ++G+GGI K T+A A +NKI  +FE   F  ++RE +  
Sbjct: 195 PLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSA 254

Query: 217 TGGIKDLQKKLLSELSK-DGNMRNIESQLNRLA----RKKVRIVFDDVT----------- 260
             G+  LQK L+ EL +    + ++   L ++      KK+ +V DDV            
Sbjct: 255 ENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALVGE 314

Query: 261 -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 G+ ++ITTRD ++L     N++Y +K L    A KLF   +   +    + + L
Sbjct: 315 TRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEEPTKNLLAL 374

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEV-WESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           + K ++ +  +PLA++V G  L  + +E  W++ + KL+      +++VL++S+ SLDD 
Sbjct: 375 SKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKSLDDE 434

Query: 375 QKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           +K VFLDIAC FL+ E  +DEV+ +                 KSL+ +     + MHD +
Sbjct: 435 EKKVFLDIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWMHDQI 494

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK---------- 469
           RDMGR++V KES   PG R+RLW   +I  VL    GT +I GI LD  K          
Sbjct: 495 RDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARDPTADE 554

Query: 470 -VNR-------------------------------EIHMNSYAFSKMPKLRFLRFYGDKN 497
            V+R                               EI +   +F+ M KLR L+     N
Sbjct: 555 IVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQI---NN 611

Query: 498 KCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSS 555
             +  +L+ +P +E++ ++W  CPL+ L  +  A +L  L +  + + Q    VQ L + 
Sbjct: 612 VELEGNLKLLP-SELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQ----VQTLRNK 666

Query: 556 LCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIR-ELPESLGRLSWVKRLILS 612
           +      +   +  C  LE +PD    E LE L  +  T+  ++P+S+G L  +  L   
Sbjct: 667 MVDENLKVVI-LRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFR 725

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA-----RNCTSLEKLPA 667
             S L      +  L  L  LF+S C  L  LPE   N+G +++      + T+++ LP 
Sbjct: 726 RCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPE---NIGAMTSLKELLLDGTAIKNLPE 782

Query: 668 GLSSMSSVLYVNL 680
            ++ + ++  ++L
Sbjct: 783 SINRLQNLEILSL 795



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 41/286 (14%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+ L +LS + +L L NN     +P S+  LS L  L +  C  L+ LP LPC L  L
Sbjct: 1077 KIPDDLEKLSCLMKLNLGNNY-FHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL 1135

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--VKDGWM-----KHSLYE 706
            +  NC SLE + + LS ++ +  +NL N  K +D   L  +  +K  +M      +SL  
Sbjct: 1136 NLANCFSLESV-SDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAV 1194

Query: 707  ERGIKKS-------MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            ++ + K+       +  PGN +P WF         T   +P      N+ +     AVVV
Sbjct: 1195 KKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQP------NRELRGVIIAVVV 1244

Query: 760  FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH--LYSWFLGKISYVESDHVFLGCNS 817
                      ++ +DD+             K + H    +  L  +    +D + +   S
Sbjct: 1245 ------ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQLHICRYS 1298

Query: 818  FGGEYFGPNYDEF--SFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                 F P        + I      PP  +  E+K  GIH VY  D
Sbjct: 1299 ----AFHPLVTMLKDGYTIQVIKRNPPIKQGVELKMHGIHLVYEGD 1340



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 9/128 (7%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         E+ +CK L+ LP    +++ L  L ++G+ I ELPE  G+L  
Sbjct: 917  IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 976

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L +SN   L+R+PES   L  L  L++        + ELP + G LS  N   LE L
Sbjct: 977  LVELRMSNCKMLKRLPESFGDLKSLHRLYMKET----LVSELPESFGNLS--NLMVLEML 1030

Query: 666  PAGLSSMS 673
               L  +S
Sbjct: 1031 KKPLFRIS 1038



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 8/127 (6%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSW 605
           ++ LP S+   +      +  CK+ E LP     L++LE L +  T ++ LP S+G L  
Sbjct: 777 IKNLPESINRLQNLEILSLRGCKIQE-LPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKN 835

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL---SARNCTSL 662
           ++ L L   ++L +IP+SI  L  L  LFI+    ++ LP  P +L  L   SA +C  L
Sbjct: 836 LQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA-VEELPLKPSSLPSLYDFSAGDCKFL 894

Query: 663 EKLPAGL 669
           +++P+ +
Sbjct: 895 KQVPSSI 901



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 26/124 (20%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKGTTIRELPESLGRLSW 605
           V+ LP    +  +   F   DCK L+++P  +    +L  L +  T I  LPE +G L +
Sbjct: 870 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 929

Query: 606 VKRLILSN-----------------------NSNLERIPESIRHLSKLTFLFISHCERLQ 642
           ++ L L N                        SN+E +PE    L KL  L +S+C+ L+
Sbjct: 930 IRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLK 989

Query: 643 TLPE 646
            LPE
Sbjct: 990 RLPE 993


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 234/836 (27%), Positives = 377/836 (45%), Gaps = 160/836 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG+  R  F SHL   L    I  FID+   RG+++S  L   I+ S IA+ I
Sbjct: 15  HQVFMNFRGKQLRKGFVSHLEKALKRDGINAFIDEDETRGNDLS-ILFSRIDESRIALAI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FS  Y  S W                      FY+V+   V+     FG  F  L K   
Sbjct: 74  FSSMYTESNWCLDELVKIKECVDLGKLVVIPIFYKVETDDVKNLKGVFGDKFWELVKTCN 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL---------DATFQSKN 150
            EK+ +WK AL    +  GF    +  E + +E+I   V++ L         +      +
Sbjct: 134 GEKLDKWKEALKVVTNKMGFTLGEMSNEGEYVEKIVRQVIEVLSNVSTDLKREVPIDDPS 193

Query: 151 KG--------------LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFN 196
            G              L G+   ++++E  L    +    + + G+ GI K T+   ++ 
Sbjct: 194 AGEGETPEAAPDSLPHLFGINTRLQQLEEKLDFECKSTLIIGVVGMPGIGKTTLTSMLYE 253

Query: 197 KISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLN------RLARK 250
                F    F  +V +  +    + ++  L++EL K+ +++   + ++       L   
Sbjct: 254 NWQGGFLSRAFLHDVSQMSKRYTKRQMRNILMTELLKEVDLKQKVADMSPKSLKAHLLSM 313

Query: 251 KVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADA 294
           K  IV D+V+                 GSR+I TT D  V++    +  Y ++ L   D+
Sbjct: 314 KSLIVLDNVSDKKQIKDLLEEDDWIKIGSRIIFTTSDISVIEG-MVDDTYEVQRLTGRDS 372

Query: 295 HKLFCQWAFGGD--HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL 352
              F  +AF       + + I L+   + YA+G PL LK+LG  L G+ ++ W   +R+L
Sbjct: 373 FDYFSHFAFNFKLPTPEGNFINLSRLFVDYAKGNPLVLKILGVELSGKKEKYWTDKLREL 432

Query: 353 EIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFL---------------EGEHRDEVISI 397
              P  ++++VL+ISYD L   QK+VFLD+ACF                + E  D V  I
Sbjct: 433 AESPIKKLQDVLRISYDGLGQLQKDVFLDVACFFRSGDDYYVRCLVESCDTEPIDGVSEI 492

Query: 398 FD-ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
            D ASK LIN+    R+ MHDLL   G+E+  +      G R RLW+H  I   LKK  G
Sbjct: 493 KDLASKFLINIS-GGRMEMHDLLYTFGKELGSQSQ----GLR-RLWNHILIVGALKKRAG 546

Query: 457 TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK------NKCMVSHLEGVPFA 510
            +++ GI LDM ++ +E+ +    F++M  LR+L+FY  +        C ++  EGV F+
Sbjct: 547 ADSVRGIFLDMFELKKELPLEKCTFTEMRNLRYLKFYSSRCHQEGEADCKINFPEGVEFS 606

Query: 511 --EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP----------SSL 556
             EVR+L W + PL+ L  +   + L  L +P +++E++W+ ++  P          S L
Sbjct: 607 LDEVRYLYWLKFPLEKLPKDFNPKNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKL 666

Query: 557 CTF------KTPITFEIIDCKMLERLPDE---LENLEYLTVKG-TTIRELPESLGRLSWV 606
           C        K+     +  C  LE LP E   LENL +L ++G T++R LP     L  +
Sbjct: 667 CNLTGLLNAKSLQRLNLEGCTSLEELPSEMKSLENLVFLNMRGCTSLRVLPHM--NLISM 724

Query: 607 KRLILSNNSNLE--------------------RIPESIRHLSKLTFLFISHCERLQTLPE 646
           K LIL+N S+LE                    ++P ++  L +L  L +  C+ L+ +P+
Sbjct: 725 KTLILTNCSSLEEFQVISDNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQ 784

Query: 647 LPCNLGLLSA------RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
               LG L A        C++L+  P  + +M  +        L LD  E+ EI K
Sbjct: 785 C---LGRLKALQELVLSGCSTLKTFPVPIENMKCL------QILLLDGTEIKEIPK 831



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 60/357 (16%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGR--- 602
            ++ +P  L   K      +  C  L+  P  +EN   L+ L + GT I+E+P+ L     
Sbjct: 779  LRAVPQCLGRLKALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKEIPKILQYNSS 838

Query: 603  --------------LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
                          LS ++RL LS N  +  +   I  L  L +L + +C+ L ++  LP
Sbjct: 839  KVEDLRELRRGVKGLSSLRRLCLSRNGMISNLQIDISQLYHLKWLDLKYCKNLTSISLLP 898

Query: 649  CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHS----- 703
             NL +L A  C  L+ + + + ++  ++      F+  + N+L ++ K+    ++     
Sbjct: 899  PNLEILDAHGCEKLKTVASPM-ALPKLMEQVRSKFIFTNCNKLEQVAKNSITLYAQRKCQ 957

Query: 704  -----LYEERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
                  Y+E  + +++    FPG+E+P WF HQ+ GS   LK  PP     N L +   C
Sbjct: 958  LDALRCYKEGTVSEALLITCFPGSEVPSWFNHQTFGSKLKLKF-PPHWCD-NGLSTLVLC 1015

Query: 756  AVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHL-YSWFLG----KISYVESDH 810
            AVV FP            D+ +       C++K + E  + +S  LG    +   ++SDH
Sbjct: 1016 AVVKFP-----------RDEINRFSIDCTCEFKNEVETCIRFSCTLGGGWIESRKIDSDH 1064

Query: 811  VFLGCNS-------FGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQ 860
            VF+G  S         G      + ++      S  F      GE+  CG+  VY +
Sbjct: 1065 VFIGYTSSSHITKHLEGSLKSQEHHKY-VPTEASIEFTVRHGAGEIVNCGLSLVYEE 1120


>gi|357452803|ref|XP_003596678.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355485726|gb|AES66929.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 861

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 229/792 (28%), Positives = 373/792 (47%), Gaps = 119/792 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           ++DVF+SFRG DTR+ F  HL+H L  K I    D +      ++Q+++           
Sbjct: 34  LHDVFISFRGTDTRNTFIDHLYHHLIRKGISAIRDSR-----ELNQTVIP---------- 78

Query: 61  IFSERYASSRWFFYRVDPSHVRKQ-SHSFGRHFSRLRKRF---PEKMKRWKNALTEAADL 116
                       FY +DPS+VR   S +F   ++   K+    P+K+ RW+  + +    
Sbjct: 79  -----------IFYDIDPSYVRSNLSWAFNGDYNSRTKKLNYDPDKVSRWERVVIQ---- 123

Query: 117 SGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIG--SEGV 174
                  + PE   IE+I   V+K+LD  F     GLVG++  IEE+E LL +    +  
Sbjct: 124 -------LSPEFTEIEKIVQAVIKKLDHKFSGFTSGLVGMQPRIEELEKLLKLSLEDDDF 176

Query: 175 CKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKD 234
             L IWG+GG+ K T A  ++++IS  F+   F  N  +    GGI  +QK++L +   +
Sbjct: 177 RVLGIWGMGGVGKTTHATVLYDRISYQFDARCFIHNTSKIYMDGGIAAVQKQILRQALDE 236

Query: 235 GNMRNIES------QLNRL-ARKKVRIVFDDVTSGSR-VIITTRDKQVLKNCWANKKYRM 286
            N+ + ++       +NRL +  KV +V D++    + +IIT+RD+ +L+   A+  + +
Sbjct: 237 RNLDSHDACEIAGIMVNRLHSGIKVLVVLDNINQLEQLIIITSRDEHILRVYGADTVHEV 296

Query: 287 KELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWE 346
             L   DA++LF + AF G+      IEL  + +KYAQ +PLA++V+  +LC R   +W 
Sbjct: 297 PLLNSNDAYELFHRNAFKGEDQSYDFIELIPEVLKYAQHLPLAIRVVASFLCTRDATLWI 356

Query: 347 SAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA------ 400
            A+ +L   P  +I +VL++S D L   +K +FL IACF +GE  D V  I DA      
Sbjct: 357 DALDRLRNNPDSKIMDVLQMSVDGLQHEEKEIFLHIACFFKGEREDYVKRILDACGLYPQ 416

Query: 401 -------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
                   KSLI +     I MHD+L+++G++IVR +    PG  +RLW   D Y VL  
Sbjct: 417 IGIQRILEKSLITIK-NEEIHMHDMLQELGKKIVRHQFPEEPGSWSRLWRCNDFYHVLMT 475

Query: 454 NTGTEAIEGISL--DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE 511
            TGT  ++ +     M+  N +  + +  F   PKL  L F G  N   V H       E
Sbjct: 476 KTGTNNVKDLPYLKRMDLSNSKYLIETPKFFWTPKLERLDFTGCTNLIHV-HSSIGHLTE 534

Query: 512 VRHLEWPQC-PLKTLNI-CAEKLVSLKM----PCTKVEQLWD-----------DVQRLPS 554
           +  L    C  L  L+      L S ++     CTK+E++ D           ++  +P 
Sbjct: 535 LVFLSLQNCSSLVDLDFGSVSNLSSFQVLRLCGCTKLEKMPDFTGLKFLRNCTNLIVIPD 594

Query: 555 SLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSN 613
           S+    + +T +   C  L  L            KG   + E+P+++G L  ++R+ L  
Sbjct: 595 SVNRMISLVTLDFYGCLKLTTLHH----------KGFCNLHEVPDAIGELRCLERVNLQG 644

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS 673
           N   + +P     L  L+++ +SHC  LQT+ + P    L  + +    +   AG S   
Sbjct: 645 N-KFDALPNDFYDLKSLSYINLSHCHELQTIRQWP----LSPSASSKGRDFKMAGGSRHR 699

Query: 674 SVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKS-----------MYFPGN-EI 721
           S LY+  C      P    + ++  W++  L      ++S           + FP +  I
Sbjct: 700 SGLYIFDC------PKFTKKSIEYTWLRRLLQNTHHFRRSFDIVVPWDWKNIDFPSSCCI 753

Query: 722 PKWFRHQSMGSS 733
           P+WF HQ  G +
Sbjct: 754 PEWFNHQFDGGA 765


>gi|357499885|ref|XP_003620231.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495246|gb|AES76449.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1489

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 239/747 (31%), Positives = 352/747 (47%), Gaps = 128/747 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L   L  K ++TF+D  +L +G+ I+ SLL  IE S +AII
Sbjct: 12  YDVFLSFRGEDTRHGFTGYLKKALDDKGVRTFMDAKELKKGEEITPSLLKAIEDSMMAII 71

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSR---L 95
           + SE YASS +                       FY+VDPS VRK   S+G    +    
Sbjct: 72  VLSENYASSSFCLQELSHILDTMKDKAGRYVLPVFYKVDPSDVRKLKRSYGEAMDKHDAA 131

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
                +   +WK +L + A+LSG        E + IE+I   VL+ +          LVG
Sbjct: 132 SSSSHDVNNKWKASLQQVANLSGSHYKGDEYEYEFIEKIIEQVLRNIKPIVLPAGDCLVG 191

Query: 156 VECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E   + + SLL +GS + +  + I GIGGI K T+A  V+N I   F+ S F   VR+ 
Sbjct: 192 LEHQKQHVTSLLNVGSNDTIHMVGIHGIGGIGKTTLALEVYNSIVHQFQCSCFFEKVRDF 251

Query: 215 EETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLAR----------------KKV 252
           +E+G I  LQK LLS++  + NM      + +     RL +                K +
Sbjct: 252 KESGLIY-LQKILLSQIVGETNMEITSVRQGVSILQQRLHQKKVLLLLDDVDKDEQLKAI 310

Query: 253 RIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF--------- 303
               +    GSRVIITTRDK++L      ++Y +K L  ADA  L    A          
Sbjct: 311 AGSSEWFGLGSRVIITTRDKRLLTYHGIERRYEVKGLNDADAFDLVGWKALKNYYSPSYK 370

Query: 304 -------GGDHLDA----------------SHIELTDKAIKYAQGVPLALKVLGCYLCGR 340
                   G  L+A                S+  +  +A+ YA G+PLAL+V+G +   +
Sbjct: 371 DVLLEQKQGRELNANELCRLKYLKKDVRFSSYANVLKRAVAYASGLPLALEVIGSHFFNK 430

Query: 341 SKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA 400
           + E     + + E +P  +I+  L++S+D+L D  K VFLDIAC L+G +   V  I  A
Sbjct: 431 TIEQCNHVLDRCERVPDKKIQTTLQVSFDALQDEDKFVFLDIACCLKGWNLTRVEEILHA 490

Query: 401 --------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
                          KSLI + +   + +HDL+ DMG+EIVR+ES   PGKR RLW ++D
Sbjct: 491 HYGNIMKDHIDVLVEKSLIKISVSGNVTLHDLIEDMGKEIVRRESPEDPGKRTRLWAYED 550

Query: 447 IYQVLKKNTGTEAIEGISLDMNK--VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHL 504
           I +V K+NTGT  I+ I    +     ++   +  AF KM  LR L F      C     
Sbjct: 551 IKKVFKENTGTSTIKIIHFQFDPWIEKKKDASDGKAFKKMKNLRTLIF--STPVCFSETS 608

Query: 505 EGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
           E +P   +R LE+        +     L             WD   +        K    
Sbjct: 609 EHIP-NSLRVLEYSNRNRNYYHSRGSNLFE-----------WDGFLK--------KKFEN 648

Query: 565 FEII--DC-KMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLE 618
            +++  DC  +L R+PD   L NLE  +++  T++  + ES+G LS +K L L   +NL+
Sbjct: 649 MKVLNYDCDTLLTRMPDISNLPNLEQFSIQDCTSLITIDESVGFLSKLKILRLIGCNNLQ 708

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLP 645
            +P    + + L  L +SHC  L++ P
Sbjct: 709 SVPP--LNSASLVELNLSHCHSLESFP 733


>gi|7488170|pir||D71437 probable resistance gene - Arabidopsis thaliana
          Length = 2467

 Score =  262 bits (670), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 248/834 (29%), Positives = 375/834 (44%), Gaps = 157/834 (18%)

Query: 12   DTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW 71
            D R  F SHL   L  +SI TF+D  ++R   I+  L+  I  + I+I+IFSE YASS W
Sbjct: 1145 DVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELITAIREARISIVIFSENYASSTW 1204

Query: 72   -----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMK-RWK 107
                                    FY VDPSHVRKQ   FG  F +  +  PE  K RW 
Sbjct: 1205 CLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWV 1264

Query: 108  NALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLL 167
             ALT+ ++L+G D      E+ ++ +IANDV  +L          LVG+E  IE I+  L
Sbjct: 1265 KALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKL-FPLPKGFGDLVGIEDHIEAIKLKL 1323

Query: 168  CIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG-SYFALNVREAEETGGIK-DLQ 224
            C+ S E    + IWG  GI K TI  A+F+++S  F   ++         +  G+K   +
Sbjct: 1324 CLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWE 1383

Query: 225  KKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----------------SGSRVI 266
            K+LLSE+   KD  + +      RL  KKV I+ DDV                 SGSR+I
Sbjct: 1384 KELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGSRII 1443

Query: 267  ITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGV 326
            + T+D+Q+LK    +  Y +K      A K+ CQ+AFG         EL  +  K A  +
Sbjct: 1444 VITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAKLAGNL 1503

Query: 327  PLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFL 386
            PL L VLG  L  RSKE W   + +L+   + +I + L++SY  LD   +++F  IA   
Sbjct: 1504 PLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQDIFHYIAWLF 1563

Query: 387  EGEHRDEVISIFD---------------ASKSLINLDLFYRIRMHDLLRDMGREIVRKES 431
             G    +V SI D                 KSLI L     I MH+LL+ +  EI R+ES
Sbjct: 1564 NGW---KVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEIDREES 1620

Query: 432  INHPGKRNRLWHHKDIYQVLKKNT-------------------GTEAIEGISLDM---NK 469
              +PGKR  L + ++I  V   NT                   GTE + GI       ++
Sbjct: 1621 NGNPGKRRFLENAEEILDVFTDNTVSFCSLMHHFILIQRLAFDGTEKLLGIDFSTSSDSQ 1680

Query: 470  VNRE-IHMNSYAFSKMPKLRFLR----FYGDKNKCMVSHLEGVPFA--EVRHLEWPQCPL 522
            +++  I ++  +F  M  L+FL     ++    +  +    G+ +   +++ L W  CPL
Sbjct: 1681 IDKPFISIDENSFQGMLNLQFLNIHDHYWWQPRETRLRLPNGLVYLPRKLKWLRWENCPL 1740

Query: 523  KTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTPIT 564
            K L  N  AE LV L+M  + +E+LW+  Q L S                 L        
Sbjct: 1741 KRLPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEE 1800

Query: 565  FEIIDCKMLERLPDEL--ENLEYLT-VKGTTIRELPE----------------------- 598
             ++ +C++LE  P  L  E+L++L  +    +R  PE                       
Sbjct: 1801 LDLCNCEVLESFPSPLNSESLKFLNLLLCPRLRNFPEIIMQSFIFTDEIEIEVADCLWNK 1860

Query: 599  ----------------SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
                            S  R   +K L +  N+ LE++ E ++ L KL  + +S CE + 
Sbjct: 1861 NLPGLDYLDCLRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMI 1920

Query: 643  TLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
             +P+L    NL +L   NC SL  LP+ + ++  +  +N+  C  LK+ P +++
Sbjct: 1921 EIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDIN 1974



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 189/632 (29%), Positives = 295/632 (46%), Gaps = 90/632 (14%)

Query: 130 LIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKIT 189
           ++E+I+NDV  +L  T        VG+E  IE I+S+LC+ S+    + IWG  GI K T
Sbjct: 1   MVEKISNDVSNKL-ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKST 59

Query: 190 IAGAVFNKISRHFE-GSYFALNVREAEETGGIK-DLQKKLLSEL--SKDGNMRNIESQLN 245
           I  A+F+++S  F   ++         +  G+K   +K+LLSE+   KD  + +      
Sbjct: 60  IGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQ 119

Query: 246 RLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKEL 289
           RL  KKV I+ DDV                 SGSR+I+ T+D+Q LK    +  Y +K  
Sbjct: 120 RLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLP 179

Query: 290 VYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAM 349
               A  + C+ AFG D       EL  +  K A  +PL L VLG  L  R K+ W   M
Sbjct: 180 SQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMM 239

Query: 350 RKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDL 409
            +L    + +I + L++SYD L    ++++  +   LE    D V     + KSLI +  
Sbjct: 240 PRLRNGLNGDIMKTLRVSYDRLHQKDQDIY--VKDLLE----DNVGLTMLSEKSLIRITP 293

Query: 410 FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK 469
              I MH+LL  +GREI R +S  +PGKR  L + +DI++V+ + TGTE + GI L   +
Sbjct: 294 DGHIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEE 353

Query: 470 V--NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL-- 525
               R + ++  +F  M  L++L+     +      L  +P  ++R L+W  CPLK+L  
Sbjct: 354 YFSTRPLLIDKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPL-KLRLLDWDDCPLKSLPS 412

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLPS-----SLCT--------FKTPITFEIID--- 569
              AE LV+L M  +K+E+LW+    L S      LC+               E +D   
Sbjct: 413 TFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEG 472

Query: 570 CKMLERLPDELEN---LEYLTVKGTTIREL--------------PESLGRLSW----VKR 608
           C+ L  LP  ++N   L  L   G  + +L              P  L  L W    +KR
Sbjct: 473 CESLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCTQGIVYFPSKLRLLLWNNCPLKR 532

Query: 609 L-----------ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL---- 653
           L           +   NS+LE++ +  + L +L  +F+   + L+ +P+L   + L    
Sbjct: 533 LHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEENA 592

Query: 654 -----LSARNCTSLEKLPAGLSSMSSVLYVNL 680
                L   +C  LE  P  L ++ S+ Y+NL
Sbjct: 593 IKLIYLDISDCKKLESFPTDL-NLESLEYLNL 623



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 39/257 (15%)

Query: 530 EKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
           +KLV L+M  CT +E L  DV           +  T ++  C  L   P   +++++L +
Sbjct: 753 QKLVRLEMKECTGLEVLPTDVN--------LSSLETLDLSGCSSLRTFPLISKSIKWLYL 804

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           + T I E+ + L + + ++ LIL+N  +L  +P +I +L  L  L++  C  L+ LP   
Sbjct: 805 ENTAIEEILD-LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV 863

Query: 649 --CNLGLLSARNCTSLEKLPAGLSSMS-------SVLYVNLCNFLKLDPNEL-SEIVKDG 698
              +LG+L    C++   +   LS  +       SV  V L   ++        E+  DG
Sbjct: 864 NLSSLGILDLSGCSNCRGVIKALSDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDG 923

Query: 699 -WMKHSLYEE----------------RGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPP 741
            W   + Y                  R   K +  PG EIPK+F +++ G S T+    P
Sbjct: 924 DWDLGTEYFSFRNCFKLDRDARELILRSCFKPVALPGGEIPKYFTYRAYGDSLTVTL--P 981

Query: 742 RPAGYNKLISFAFCAVV 758
           R +     + F  C VV
Sbjct: 982 RSSLSQSFLRFKACLVV 998



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 101/257 (39%), Gaps = 74/257 (28%)

Query: 510 AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTF-------- 559
           +++R L W  CPLK L  N   E LV L+M  + +E+LWD  Q L      F        
Sbjct: 518 SKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLK 577

Query: 560 KTP---------------ITFEIIDCKMLERLPDE--LENLEYLTVKGTT---------- 592
           + P               I  +I DCK LE  P +  LE+LEYL + G            
Sbjct: 578 EIPDLSLAINLEENAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKM 637

Query: 593 ---------------------IRELPESLGRLSWVKR----------LILSNNS--NLER 619
                                 + LP  L  L  + R          L+  N      E+
Sbjct: 638 GCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEK 697

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
           + E I+ L  L  + +S  E L  +P+L    NL  L   NC SL  LP+ + ++  ++ 
Sbjct: 698 LWEGIQSLGSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVR 757

Query: 678 VNL--CNFLKLDPNELS 692
           + +  C  L++ P +++
Sbjct: 758 LEMKECTGLEVLPTDVN 774



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLT 587
           E LV L + C K E+LW+ +Q L S           ++ + + L  +PD  +  NL++L 
Sbjct: 683 EYLVFLNVRCYKHEKLWEGIQSLGSLE-------EMDLSESENLTEIPDLSKATNLKHLY 735

Query: 588 VKGT-TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           +    ++  LP ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P 
Sbjct: 736 LNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPL 794

Query: 647 L----------------------PCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCN 682
           +                         L  L   NC SL  LP+ + ++ ++  LY+  C 
Sbjct: 795 ISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCT 854

Query: 683 FLKLDPNELS 692
            L++ P +++
Sbjct: 855 GLEVLPTDVN 864


>gi|224126833|ref|XP_002329484.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870164|gb|EEF07295.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 507

 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 177/482 (36%), Positives = 264/482 (54%), Gaps = 66/482 (13%)

Query: 36  DQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW----------------------FF 73
           D+L RG+ IS  LL  I+ S I+I++FS+ YASSRW                       F
Sbjct: 1   DELPRGEEISDHLLRAIQESKISIVVFSKGYASSRWCLNELVEILECKKRKTGQIVLPIF 60

Query: 74  YRVDPSHVRKQSHSFGRHFSRLRKRFPEKM-KRWKNALTEAADLSGFDSNVIRP--ESKL 130
           Y +DPS VRKQ+ SF   F +  +RF EK+ K W+ AL EA +LSG++ N +    E+K 
Sbjct: 61  YDIDPSDVRKQNGSFAEAFVKHEERFEEKLVKEWRKALEEAGNLSGWNLNDMANGHEAKF 120

Query: 131 IEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITI 190
           I+EI  DVL +LD  +    + LVG++     I   L   +  V  + I G+ GI K TI
Sbjct: 121 IKEIIKDVLNKLDPKYLDVPELLVGMDRLSRNIFDFLSTATHDVRIVGIHGMPGIGKTTI 180

Query: 191 AGAVFNKISRHFEGSYFALNVRE-AEETGGIKDLQKKLLSELSKD--GNMRNIESQL--- 244
           A  VFN++   FEGS F  N+ E +++  G+  LQ++LL ++ K    N+  ++      
Sbjct: 181 AKVVFNQLRYRFEGSCFFSNINETSKQFNGLALLQEQLLHDILKQDVANINCVDRGKVLI 240

Query: 245 -NRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMK 287
             RL RK+V +V DDVT                 GSRVIITTRD   L    A++ Y+++
Sbjct: 241 KERLRRKRVLVVADDVTRQDQLNALMGERGWFGPGSRVIITTRDSSFLHK--ADQTYQIE 298

Query: 288 ELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWES 347
           EL   ++ +LF   A         +IEL+   + Y  G+PLAL+V+G  L G++++ W+S
Sbjct: 299 ELKPDESFQLFSWHALRDTKPAEDYIELSKDVVDYCGGIPLALEVMGACLSGKNRDGWKS 358

Query: 348 AMRKLEIIPHVEIEEVLKISYDSLDDSQ-KNVFLDIACFLEGEHRDEVISIFDA------ 400
            + KL  IP+ +I+  L+IS+D+LD  + +N FLDIACF     ++ V  +  A      
Sbjct: 359 VIDKLRRIPNRDIQGKLRISFDALDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNP 418

Query: 401 --------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
                    +SLI + L   + MHDLLRDMGRE+VR++S   PG+R R+W+ +D + VL+
Sbjct: 419 EVDLQTLHERSLIKV-LGETVTMHDLLRDMGREVVREKSPKQPGERTRIWNQEDAWNVLE 477

Query: 453 KN 454
           + 
Sbjct: 478 QQ 479


>gi|238478954|ref|NP_001154443.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196039|gb|AEE34160.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1004

 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 251/881 (28%), Positives = 382/881 (43%), Gaps = 187/881 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R    SH+        I  F D  + R + I+ SL   I+ S I+I+I
Sbjct: 14  YIVFPSFHGPDVRKTLLSHMRKQFDFNGITMFDDQGIERSEEIAPSLKKAIKESRISIVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY V+P  VR Q+  FG  F+    ++ 
Sbjct: 74  LSKKYASSSWCLDELVDILKRKKAMKQIVMTVFYGVEPFEVRNQTGEFGIAFNETCARKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  AL E A+++G D      E+K IE+IA DV  +L+AT      G+VG+E  
Sbjct: 134 DEERQKWSKALNEVANIAGEDFLRCDNEAKRIEKIARDVSNKLNATPCRDFDGMVGLEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + E+ESLL +  +GV  + I G  GI K TIA A+ ++ S  F+ + F  N+R +  +G 
Sbjct: 194 LTEMESLLDLDYDGVKMVGISGPAGIGKTTIAKALQSRFSNRFQLTCFVDNLRGSYLSGL 253

Query: 220 IK-DLQKKLLSE-LSKDGNMRNIESQL-NRLARKKVRIVFDDVT---------------- 260
            +  LQ++ LS  L++DG   N    +  RL + +V I+ DDV                 
Sbjct: 254 DELRLQEQFLSNVLNQDGIRINHSGVIEERLCKLRVLIILDDVDHIKQLEALANKTTWFG 313

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
             SR+++TT +K++L+  W  K Y  K            QW             L  +  
Sbjct: 314 PRSRIVVTTENKELLQQEW--KSYPQKGF----------QW-------------LALRVT 348

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
           +    +PL L ++G  L G+++E WE  +  LE     +IEEVL++ Y+SLDD++K +FL
Sbjct: 349 QLCGKLPLGLCMVGSSLRGKNEEGWEEVICSLENNIDRDIEEVLRVGYESLDDNEKTLFL 408

Query: 381 DIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
            IA F   ++   V  +F               ++SLI +    RI MH LL+ +G++ +
Sbjct: 409 HIAIFFNNQYVHLVERLFADGDLDFKRALKILENRSLIEISFSSRIVMHRLLQQVGKKAI 468

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           +K+    P KR  L   ++I  VL+ +T T  +  I  D++ ++ E+++   AF +M  L
Sbjct: 469 QKQ---EPLKRQILMDAREICYVLENDTDTRYVSAILFDISGID-EVYIREGAFRRMSNL 524

Query: 488 RFLRFYGDKNKCMVSHLEGVPF-----AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           RFL  Y  K+    + +  +P        +R L+W   P K        E LV L M  +
Sbjct: 525 RFLTVYKSKDDG--NDIMDIPKRMEFPRRLRILKWEAYPNKCFPPKFHPEYLVELVMKNS 582

Query: 541 KVEQLWDDVQRLPS-------------SLCTFKTPITFEII---DCKMLERLPDE---LE 581
           K+E LW   Q L +             +L         EI+   DCK L  +P     L+
Sbjct: 583 KLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDCKSLVEIPSSFSHLQ 642

Query: 582 NLEYLTVKG------------------------TTIRELPESLGRL-------------- 603
            LE L ++G                        + +R +P    RL              
Sbjct: 643 RLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSRLRNIPVMSTRLYFLNISETAVEDVS 702

Query: 604 ----SWVKRLILSNNSN----------------------LERIPESIRHLSKLTFLFISH 637
               SW     LS NS+                      +ERIP  I+    L  L IS 
Sbjct: 703 ASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLLKSLTISG 762

Query: 638 CERLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
           C RL +LPELP +L  L A +C SLE +  P   S           N  KLD      I+
Sbjct: 763 CRRLTSLPELPASLKFLVADDCESLETVFCPFKTSKCWPFNIFEFTNCFKLDQEARRAII 822

Query: 696 KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
           +  +             +   PG E+P  F H+  G++ T+
Sbjct: 823 QRPFF----------HGTTLLPGREVPAEFDHRGRGNTLTI 853


>gi|238478956|ref|NP_001154444.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196040|gb|AEE34161.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 988

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 251/881 (28%), Positives = 382/881 (43%), Gaps = 187/881 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R    SH+        I  F D  + R + I+ SL   I+ S I+I+I
Sbjct: 14  YIVFPSFHGPDVRKTLLSHMRKQFDFNGITMFDDQGIERSEEIAPSLKKAIKESRISIVI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY V+P  VR Q+  FG  F+    ++ 
Sbjct: 74  LSKKYASSSWCLDELVDILKRKKAMKQIVMTVFYGVEPFEVRNQTGEFGIAFNETCARKT 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ ++W  AL E A+++G D      E+K IE+IA DV  +L+AT      G+VG+E  
Sbjct: 134 DEERQKWSKALNEVANIAGEDFLRCDNEAKRIEKIARDVSNKLNATPCRDFDGMVGLEAH 193

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           + E+ESLL +  +GV  + I G  GI K TIA A+ ++ S  F+ + F  N+R +  +G 
Sbjct: 194 LTEMESLLDLDYDGVKMVGISGPAGIGKTTIAKALQSRFSNRFQLTCFVDNLRGSYLSGL 253

Query: 220 IK-DLQKKLLSE-LSKDGNMRNIESQL-NRLARKKVRIVFDDVT---------------- 260
            +  LQ++ LS  L++DG   N    +  RL + +V I+ DDV                 
Sbjct: 254 DELRLQEQFLSNVLNQDGIRINHSGVIEERLCKLRVLIILDDVDHIKQLEALANKTTWFG 313

Query: 261 SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAI 320
             SR+++TT +K++L+  W  K Y  K            QW             L  +  
Sbjct: 314 PRSRIVVTTENKELLQQEW--KSYPQKGF----------QW-------------LALRVT 348

Query: 321 KYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
           +    +PL L ++G  L G+++E WE  +  LE     +IEEVL++ Y+SLDD++K +FL
Sbjct: 349 QLCGKLPLGLCMVGSSLRGKNEEGWEEVICSLENNIDRDIEEVLRVGYESLDDNEKTLFL 408

Query: 381 DIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
            IA F   ++   V  +F               ++SLI +    RI MH LL+ +G++ +
Sbjct: 409 HIAIFFNNQYVHLVERLFADGDLDFKRALKILENRSLIEISFSSRIVMHRLLQQVGKKAI 468

Query: 428 RKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKL 487
           +K+    P KR  L   ++I  VL+ +T T  +  I  D++ ++ E+++   AF +M  L
Sbjct: 469 QKQ---EPLKRQILMDAREICYVLENDTDTRYVSAILFDISGID-EVYIREGAFRRMSNL 524

Query: 488 RFLRFYGDKNKCMVSHLEGVPF-----AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           RFL  Y  K+    + +  +P        +R L+W   P K        E LV L M  +
Sbjct: 525 RFLTVYKSKDDG--NDIMDIPKRMEFPRRLRILKWEAYPNKCFPPKFHPEYLVELVMKNS 582

Query: 541 KVEQLWDDVQRLPS-------------SLCTFKTPITFEII---DCKMLERLPDE---LE 581
           K+E LW   Q L +             +L         EI+   DCK L  +P     L+
Sbjct: 583 KLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDCKSLVEIPSSFSHLQ 642

Query: 582 NLEYLTVKG------------------------TTIRELPESLGRL-------------- 603
            LE L ++G                        + +R +P    RL              
Sbjct: 643 RLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSRLRNIPVMSTRLYFLNISETAVEDVS 702

Query: 604 ----SWVKRLILSNNSN----------------------LERIPESIRHLSKLTFLFISH 637
               SW     LS NS+                      +ERIP  I+    L  L IS 
Sbjct: 703 ASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLLKSLTISG 762

Query: 638 CERLQTLPELPCNLGLLSARNCTSLEKL--PAGLSSMSSVLYVNLCNFLKLDPNELSEIV 695
           C RL +LPELP +L  L A +C SLE +  P   S           N  KLD      I+
Sbjct: 763 CRRLTSLPELPASLKFLVADDCESLETVFCPFKTSKCWPFNIFEFTNCFKLDQEARRAII 822

Query: 696 KDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
           +  +             +   PG E+P  F H+  G++ T+
Sbjct: 823 QRPFF----------HGTTLLPGREVPAEFDHRGRGNTLTI 853


>gi|227438235|gb|ACP30607.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1128

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 224/789 (28%), Positives = 343/789 (43%), Gaps = 157/789 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG+  R+ F SHL   L    I  FID    +G ++S  L   IE S IA+ I
Sbjct: 15  HQVFINFRGKQLRNGFVSHLEKALRKDGINVFIDKNETKGKDLS-ILFSRIEESRIALAI 73

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FS  Y  S W                      FY+V+   V+     FG  F  L K   
Sbjct: 74  FSTLYTESNWCLNELEKIKECVDLGKLVVIPIFYKVETDDVKNLKGVFGDKFWELAKTCR 133

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL---------DATFQSKN 150
            EK+ +WK AL +     GF  + +  E + I +I   V+K L         D   +  +
Sbjct: 134 GEKLDKWKEALEDVPKKLGFTLSEMSDEGEYISKIVGQVMKVLSDVSAGLERDVPIEDPS 193

Query: 151 KG------LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEG 204
           +       L G+E  ++++E  L    E    + + G+ GI K T+   ++ K    F  
Sbjct: 194 EADPDSSPLYGIETRLKQLEEKLEFDCESTLTVGVVGMPGIGKTTLTKMLYEKWQHKFLR 253

Query: 205 SYFALNVREAEETGGIKDLQKKLLSELSKDGNMR-------NIESQLNRLARKKVRIVFD 257
             F  +VR+  +   +   +   + EL KD ++        + ES    L  KK  +V D
Sbjct: 254 CVFLHDVRKLWQDRMMD--RNIFMRELLKDDDLSQQVAADLSPESLKALLLSKKSLVVLD 311

Query: 258 DVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQW 301
           +VT                 GS + ITT DK V++    +  Y +  L   ++ + F  +
Sbjct: 312 NVTDKKQIEVLLGECDWIKKGSLIFITTSDKSVIEG-KVDDTYEVLRLSGRESFQYFSYF 370

Query: 302 AFGGDH----LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPH 357
           AFGG         + + L+     YA+G PLALK+LG  L G+ +  WE  + KL   P 
Sbjct: 371 AFGGGKHYYTPKGNFMNLSRLFADYAKGNPLALKILGVELNGKDETHWEDKLSKLAQSPD 430

Query: 358 VEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLD 408
             I+ VL+ISYD L +  KNVFLD+ACF        V  + +         ASK  IN+ 
Sbjct: 431 KTIQNVLQISYDGLSELHKNVFLDVACFFRSGDEYYVKCLVESCDSEIKDLASKFFINIS 490

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
              R+ MHDLL   G+E+  + S        RLW+HK +   LKK  G E++ GI LDM+
Sbjct: 491 -GGRVEMHDLLYTFGKELGLQGS-------RRLWNHKGVVGALKKRAGAESVRGIFLDMS 542

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGD------KNKCMVSHLEGV--PFAEVRHLEWPQC 520
           ++ +++ +    FS M  LR+L+FY        +  C +S  EG+  P  EVR+L W + 
Sbjct: 543 ELKKKLPLEKCTFSGMRNLRYLKFYNSCCHRECEADCKLSFPEGLEFPLDEVRYLYWLKF 602

Query: 521 PLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS----------------SLCTFKTP 562
           PLK L  +   + L  L +P +++E++W+ V+  P                  L   ++ 
Sbjct: 603 PLKKLPKDFNPKNLTDLSLPYSEIEEIWEGVKATPKLKWVDLSHSSKLSKLSGLQNAESL 662

Query: 563 ITFEIIDCKMLERLPDEL------------------------------------------ 580
               +  CK L+ LP E+                                          
Sbjct: 663 QRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHMNLISMKTLILTNCSSLQEF 722

Query: 581 ----ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
               +NLE L + GT I +LP ++ +L  +  L L +   LE +PES+  L KL  L +S
Sbjct: 723 RVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVPESLGKLKKLQELVLS 782

Query: 637 HCERLQTLP 645
            C +L+T P
Sbjct: 783 GCSKLKTFP 791



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 188/454 (41%), Gaps = 72/454 (15%)

Query: 457  TEAIEGISLD----MNKVNREI-HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE 511
             E+++ +SL+    + ++ RE+ HM S  F  M     LRF    N              
Sbjct: 659  AESLQRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHMN-----------LIS 707

Query: 512  VRHLEWPQCP-LKTLNICAEKLVSLKMPCTKVEQLWDD---VQRL--------------P 553
            ++ L    C  L+   + ++ L +LK+  T + QL  +   +QRL              P
Sbjct: 708  MKTLILTNCSSLQEFRVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVP 767

Query: 554  SSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPE----------SL 600
             SL   K      +  C  L+  P  +EN   L+ L +  T I ++P+           +
Sbjct: 768  ESLGKLKKLQELVLSGCSKLKTFPIPIENMKRLQILLLDTTAITDMPKILQFNSQIKCGM 827

Query: 601  GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
              LS ++ L LS N+ +  +  +I  L  L  L + +C+ L ++P LP NL +L A  C 
Sbjct: 828  NGLSSLRHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIPLLPPNLEVLDAHGCE 887

Query: 661  SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKS------- 713
             L+ +   L+ +  +  V+   F+  + N L ++ K+     ++Y +R  ++        
Sbjct: 888  KLKTVATPLALLKLMEQVH-SKFIFTNCNNLEQVAKNSI---TVYAQRKSQQDAGNVSEA 943

Query: 714  ---MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHK 770
                 FPG+E+P WF H+++GSS  LK  PP     N+L +   CAVV FP         
Sbjct: 944  LLITSFPGSEVPSWFNHRTIGSSLKLKF-PPHWCD-NRLSTIVLCAVVSFPCTQDEINRF 1001

Query: 771  SGEDDWD-GNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEYFGPN 826
            S E   +  N    C  +     G    W   +   ++SDHVF+G   C+       G  
Sbjct: 1002 SIECTCEFTNELGTCVRFSCTLGG---GWI--EPREIDSDHVFIGYTSCSHLRNHVEGSG 1056

Query: 827  YDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQ 860
                      S  F      GE+  CG+  VY +
Sbjct: 1057 EHHKCVPTEASIEFEVRDGAGEIVNCGLSLVYEE 1090


>gi|334182655|ref|NP_173203.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332191491|gb|AEE29612.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 217/682 (31%), Positives = 323/682 (47%), Gaps = 83/682 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR    SHL+  L  + I TF DDQ +  GD+IS  L   + +S  A++
Sbjct: 12  YDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELHRALGSSSFAVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR-HFSRLRKR 98
           + SE YA+SRW                      FY VDPS VR Q  SF    +  L   
Sbjct: 72  VLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRHQLGSFSLVKYQGLE-- 129

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +K+ RW+ AL   A+LSG  S+    E+ ++ EIA D+ +R+    +  +  +VG++ 
Sbjct: 130 MVDKVLRWREALNLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLMHKIDSGNIVGMKA 189

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E +  LL   S  V  + IWG+GGI K +I   +++++S  F    F  N++   +  
Sbjct: 190 HMEGLNHLLDQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVSKDN 249

Query: 219 G--IKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVTS---------- 261
           G  +K LQK+LLS  L  D  + ++E+       RL  +KV +V D V            
Sbjct: 250 GHDLKHLQKELLSSILCDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHALAKE 309

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GGDHLDASHIE 314
                 GSR+IITTRD  +L  C     Y +K L   DA ++F Q AF GG        +
Sbjct: 310 KNWFGPGSRIIITTRDMGLLNTCGVEVVYEVKCLDDKDALQMFKQIAFEGGLPPCEGFDQ 369

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGR--SKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           L+ +A K A G+P A++    +L GR  S E WE A+  LE      I E+LKISY+ L 
Sbjct: 370 LSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLDENIMEILKISYEGLP 429

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLL 419
              +NVFL + C   G+    + S+               A KSLI +     + MH L+
Sbjct: 430 KPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLV 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
             MGREI+R    +    R  L    +I   L    G E  E + L    +   + M + 
Sbjct: 490 EQMGREIIRD---DMSLARKFLRDPMEIRVALAFRDGGEQTECMCLHTCDMTCVLSMEAS 546

Query: 480 AFSKMPKLRFLRFYG--DKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTLNICAEK--LV 533
              +M  L+FL+ Y   D  +  +  +   PF    +R   W   PL+ L   ++   LV
Sbjct: 547 VVGRMHNLKFLKVYKHVDYRESNLQLIPDQPFLPRSLRLFHWDAFPLRALPSGSDPCFLV 606

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT 591
            L +  + +E LW     L       K+    ++   K L++LPD   + +LE L ++  
Sbjct: 607 ELNLRHSDLETLWSGTPML-------KSLKRLDVTGSKHLKQLPDLSSITSLEELLLEQC 659

Query: 592 T-IRELPESLGRLSWVKRLILS 612
           T +  +PE +G+ S +K+L LS
Sbjct: 660 TRLEGIPECIGKRSTLKKLKLS 681



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 577 PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
           PD   +L+ L +    IR++P  +  L  +++L LS N + E +PE++  LS+L  L++ 
Sbjct: 793 PD-FPDLKELKLVNLNIRKIPSGICHLDLLEKLDLSGN-DFENLPEAMSSLSRLKTLWLQ 850

Query: 637 HCERLQTLPELP--CNLGLLSARNCTSLEKL 665
           +C +LQ LP+L     L L + RN  SL KL
Sbjct: 851 NCFKLQELPKLTQVQTLTLTNCRNLRSLAKL 881



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 40/209 (19%)

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
           LR +RF   +N    S      F +++ L+     ++ +   IC   L+       K++ 
Sbjct: 773 LRIMRFSHKENGESFSFDVFPDFPDLKELKLVNLNIRKIPSGICHLDLLE------KLDL 826

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT------------- 591
             +D + LP ++ +     T  + +C  L+ LP +L  ++ LT+                
Sbjct: 827 SGNDFENLPEAMSSLSRLKTLWLQNCFKLQELP-KLTQVQTLTLTNCRNLRSLAKLSNTS 885

Query: 592 -----------------TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
                            ++  L + L   + +  L LSN+ + E +P SIR L+ L  L 
Sbjct: 886 QDEGRYCLLELCLENCKSVESLSDQLSHFTKLTCLDLSNH-DFETLPSSIRDLTSLVTLC 944

Query: 635 ISHCERLQTLPELPCNLGLLSARNCTSLE 663
           +++C++L+++ +LP +L  L A  C SLE
Sbjct: 945 LNNCKKLKSVEKLPLSLQFLDAHGCDSLE 973


>gi|359493386|ref|XP_003634582.1| PREDICTED: uncharacterized protein LOC100256836 [Vitis vinifera]
          Length = 1239

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 180/484 (37%), Positives = 263/484 (54%), Gaps = 65/484 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR+NFTSHL+  L   +I+TF DD +L RGD I+  LL  IE S IA+I
Sbjct: 23  YDVFLSFRGEDTRNNFTSHLYKALDHANIETFKDDKELRRGDEIAPELLKAIEGSRIALI 82

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQS----HSFGRHFSRL 95
           IFS+ YA S+W                      FY V+PS VRKQ+     +F  H S  
Sbjct: 83  IFSKTYAHSKWCLDELVKIMECKEEKGQKVFPIFYHVEPSEVRKQTGIYGEAFNNHESNA 142

Query: 96  RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVG 155
            +   +K+++W+ AL +A +LSGF   +         E     ++RL        + +VG
Sbjct: 143 DEEKKKKIEKWRTALWKAGNLSGF--PLQDSPESEFIEEIIGEIRRLIPKLVHVGENIVG 200

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++ + +E++ L+   S  V  + I+G GGI K TIA  V+N +   F+   F  NVRE +
Sbjct: 201 MDENSKEVKLLIDSQSNKVSMVGIYGTGGIGKTTIAKVVYNGLLDQFKRHSFLENVREKS 260

Query: 215 EETGGIKDLQKKLLSE--LSKDGNMRNIESQLNRLARK----KVRIVFDDVT-------- 260
           ++  G+ +LQKKLL +  + KD  + NI   +  +  K    KV I+ DDV         
Sbjct: 261 KDDPGLLELQKKLLYDILMEKDSKISNIGEGIKEIKSKCCFEKVLIILDDVDCLRQLEFL 320

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS +I+TTR+K+ L    +   Y  K L +  A +LFC  AF   H   ++
Sbjct: 321 APNSECFHRGSIIIVTTRNKRCLDVHKSYSSYEAKGLAHEQAKELFCWNAFKQHHPKDNY 380

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           ++L+++ + YA+G+PLAL VLG +L  R  + WES + KL+  P  +I+ VL+ISYD LD
Sbjct: 381 VDLSNRILDYAKGLPLALVVLGSFLYKRGVDEWESTLHKLKTTPFKDIQNVLQISYDGLD 440

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
           D  K +FLDIACF +  +++ V SI +               + LI++ L   IRMHDLL
Sbjct: 441 DICKKLFLDIACFFKDHNKEFVTSILEGCDLHPKIGLKVLDERCLISI-LGGTIRMHDLL 499

Query: 420 RDMG 423
           ++MG
Sbjct: 500 QEMG 503


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 376/755 (49%), Gaps = 84/755 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R    S+L      K I  F D+++ RG ++S SL   I+ S I+I+I
Sbjct: 18  FKVFSSFHGPDVRKTLLSNLREHFQGKGITMFDDEKIKRGGDLSPSLKRAIKTSKISIVI 77

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S++YASS W                      FY V+PS VRKQ+  FG  F++    + 
Sbjct: 78  LSQKYASSSWCLDELLEIMKRKKAMKQIVMTVFYGVEPSDVRKQTGDFGIAFNKTCVNKT 137

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            ++ K W  ALT+ ++++G D      E+ +I++IA DV  +L+AT     + ++G+E  
Sbjct: 138 DKERKEWSKALTDVSNIAGEDFKKWDNEANMIKKIARDVSYKLNATPSKDFEDMMGLEAH 197

Query: 160 IEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
           +++I+SLL +   +    + I G  GI K TIA A+ +++S  F+ + F +++R   E  
Sbjct: 198 LKKIQSLLRLDYKDEALIIGISGPAGIGKSTIARALESRLSDRFQLTCF-MDLR-GSENN 255

Query: 219 GIKDLQKKLLSE-------LSKDGN-MRNIESQLNRLARKKVRIVFDDVTS--------- 261
           G+ D  ++L  +       L++DG  + ++     RL+  +V I+ DDV+          
Sbjct: 256 GLHDYGQQLRLQEQLLAKVLNQDGTRICHLGVLQQRLSDLRVLIILDDVSDIKQLKALAK 315

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+I+TT +K +L+    +  Y +      +A ++FC++AF       +  +
Sbjct: 316 ETTWFGPGSRIIVTTENKDLLQQRGIDSTYHVGFPSREEALEIFCKFAFEQSSPPHAFEK 375

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L  +       +PL L V+G  L G+ ++ WE  + +LE  P  EI++VL++ Y+ L ++
Sbjct: 376 LAARITHLCGNLPLGLCVMGSSLFGKKQDEWEFVVHRLETNPGQEIDDVLRVGYERLHEN 435

Query: 375 QKNVFLDIACFLEGEHRDEVISI--------------FDASKSLINLDLFYRIRMHDLLR 420
            + +FL IA F     RD V ++              F  +KSLI +    +I MH LL+
Sbjct: 436 DQMLFLHIAIFFNYRDRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIVMHKLLQ 495

Query: 421 DMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEA-IEGISLDMNKVNREIHMNSY 479
            +GR+ +R++    P KR  L +  +I  +L+   GT   + GIS D + ++ E+ +   
Sbjct: 496 QVGRQAIRRQ---EPWKRQILINANEICDLLRYEKGTSCNVSGISFDTSGIS-EVTICDG 551

Query: 480 AFSKMPKLRFLRFYG--DKNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVS 534
           AF ++  LRFL  Y   D     V   E V F   +R L W   P K+L      E LV 
Sbjct: 552 AFKRLHDLRFLHVYKSRDDGNNRVHIPEKVEFPPRLRLLHWAAYPSKSLPPTFNLECLVE 611

Query: 535 LKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-T 591
           L M  + VE+LW+  Q L       K     ++ + K L+ LPD     NLEY  +    
Sbjct: 612 LNMRESLVEKLWEGTQHL-------KNLKYMDLTESKNLKELPDLSNATNLEYFYLDNCE 664

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ E+P S   L  ++ L ++N  NL+ IP  + +L+ +  + +  C RL+  P +  ++
Sbjct: 665 SLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHM-NLTSVKQVNMKGCSRLRKFPVISRHI 723

Query: 652 GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
             L   + T LE +PA ++S   ++Y+++ +  KL
Sbjct: 724 EALDISDNTELEDMPASIASWCHLVYLDMSHNEKL 758



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 28/270 (10%)

Query: 492 FYGDKNKCMVSHLEGVP--FAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQL-WDD 548
           FY D  + +V     +P  FA +  LEW    L+  N    +++   M  T V+Q+    
Sbjct: 658 FYLDNCESLVE----IPSSFAHLHKLEW----LEMNNCINLQVIPAHMNLTSVKQVNMKG 709

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKR 608
             RL       +     +I D   LE +P  + +  +L     +  E  + L +L    R
Sbjct: 710 CSRLRKFPVISRHIEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLR 769

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAG 668
            +  + +++E IP+ I+ L +L  L +S C RL +LP+LPC++  L A +C SLE + + 
Sbjct: 770 HLNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSP 829

Query: 669 LSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ 728
           L + S+ L  +  N  KL       I++                S+  PG E+P  F H+
Sbjct: 830 LYTPSARL--SFTNCFKLGGEAREAIIR---------RSSDSTGSVLLPGREVPAEFDHR 878

Query: 729 SMGSSATLKTRPPRPAGYNKLISFAFCAVV 758
           + G+S ++      P G N    F  C V+
Sbjct: 879 AQGNSLSILL----PLGGNS--QFMVCVVI 902


>gi|13509211|emb|CAC35325.1| Ngc-B protein [Linum usitatissimum]
 gi|13509232|emb|CAC35336.1| Nbi-B protein [Linum usitatissimum]
          Length = 1108

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 236/812 (29%), Positives = 383/812 (47%), Gaps = 135/812 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L    I+TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRQTFADHLYAWLVRSKIRTFRDEEGLQKGETIGSSLIQAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           FY +DP  VR   S  +   F 
Sbjct: 91  ILTQNYASSKWCLQELAKMVDCWKNGGGGKGQHIILPVFYFMDPRDVRHPDSGPYKEAFE 150

Query: 94  RLR-KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +   K  PE +  WK AL +   + G+  N +  +  ++++I   +   L A +      
Sbjct: 151 QHNLKHDPETILEWKEALQDVGKMKGWHINELTGQGAVVDKIFTTIEFHLRANYTLATDE 210

Query: 153 LVGVECSIEEIESLLCIG---SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
           LVG++ S+EE+  L+ +    SE +  + I+G+GG+ K T+A AVFNK+S  FE   F  
Sbjct: 211 LVGIDSSVEEVMELMNLDHSTSERI--IGIYGMGGLGKTTLAKAVFNKVSMQFERCCFLD 268

Query: 210 NVREAE-ETGGIKDLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDV--- 259
           N+RE      G+  LQ K++S+ L KD +     S        R+ R K+ +V DD+   
Sbjct: 269 NIRETLLRNDGVVALQNKVISDILRKDSDQAKNASDGVRIIRERVRRHKIFVVLDDIDES 328

Query: 260 -------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                        ++ SR +ITTRD + L+     K + ++E+ +  + +LF + AFG D
Sbjct: 329 FHFDEIFGKLGDFSTDSRFLITTRDARTLELLNECKMFGLEEMSHDHSLQLFSKHAFGVD 388

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
           +    +  L ++ I+ A G+PLALKV+G  L    K  WE  + +L+ IP  +++E LK+
Sbjct: 389 YPPEDYASLCEEFIQVASGLPLALKVIGSLLFKSDKRFWEDKLIELKAIPSAKVQERLKV 448

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVI------SIFDAS-------KSLINLDLFYRI 413
           SY+ L  ++K +FLDIAC   G  ++  +       ++ AS       +SL+ +D   + 
Sbjct: 449 SYNELTHNEKQIFLDIACLFVGAKKEVPMYMWSDCDLYPASTLRTLVQRSLVRMDDNKKF 508

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHD +RD+GR IVR+E+  +P KR+R+W + D   +LK   G + +E + +DM      
Sbjct: 509 WMHDHIRDLGRTIVREENSQNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDMKGEGYA 568

Query: 474 IHMNSY-AFSK------------------MPKLRFLRFY-GDK-------NKCMVSHLEG 506
           +    +  FS+                  +P LR+LR Y GD        NK ++  L+G
Sbjct: 569 LTNKEFKQFSRLRFLEVLNGDLSGNFKNILPNLRWLRVYRGDPSPSGLNLNKLVILELDG 628

Query: 507 VPFAEVRHLEWPQC----PLKTLNICA----EKLVSLKMPCTKVEQL------WDDVQRL 552
             +       W +      LK +N+ +    EK+  L   C  +E L      W    R 
Sbjct: 629 C-YVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLST-CRGLELLCFHKCQW---MRG 683

Query: 553 PSSLCTFKTPITFEI--IDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
              + TFK     +I   +   L+   + L+NL+ L V  + + E+P  + +LS ++ L 
Sbjct: 684 ELDIGTFKDLKVLDINQTEITTLKGEVESLQNLQQLDVGRSGLIEVPAGISKLSSLEFLD 743

Query: 611 LSN--NSNLERIPESIRHL-----------SKLTFLFISHCERLQTLPELP--CNLGLLS 655
           L++  +  +E +P  ++ L           S L  L I     LQ LP L    NL  L 
Sbjct: 744 LTSVKHDEVEMLPNGLKLLVISSFSLSALPSSLIKLDICDSRNLQRLPNLASVTNLTRLH 803

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            +    + ++P GL  +  +  +++CN   LD
Sbjct: 804 LKE-VGIHEIP-GLGKLKLLESLSICNAPNLD 833


>gi|224113721|ref|XP_002316552.1| tir-nbs resistance protein [Populus trichocarpa]
 gi|222859617|gb|EEE97164.1| tir-nbs resistance protein [Populus trichocarpa]
          Length = 500

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 262/493 (53%), Gaps = 66/493 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VFLSFRGEDTR NFT HL+  L    I TF DD++ RG+NI   L   ++ S IAII+
Sbjct: 1   YQVFLSFRGEDTRKNFTDHLYTALLQAGIHTFRDDEIGRGENIESELQKALQQSKIAIIV 60

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASSRW                      FY VDPS VRKQ+ SF   F    K F 
Sbjct: 61  FSKDYASSRWCLDELVMIMERRRTADCRVLPVFYDVDPSQVRKQTGSFATAFVEHEKHFK 120

Query: 101 EKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           E+M+R   W+ AL E ADL+G    V+    E+ L++ I   V K LD          +G
Sbjct: 121 EEMERVNGWRIALKEVADLAGM---VLGDGYEALLVQCIVGKVSKNLDRKIFHVPLHFIG 177

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
            +  +  I S L   S       ++GIGG+ K  IA +VFN+  R FE   +  NVRE +
Sbjct: 178 RDPLVNYINSWLQDESHDAAIAMLYGIGGVGKTAIAKSVFNQNFRKFESRSYLSNVREIS 237

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVTS------- 261
           +E+ G+  LQ++LLS++       + +++  +    + L  ++  IV DDV +       
Sbjct: 238 KESKGVVCLQRQLLSDILNQTVDEIHDVDEGIIKIKDALCCRRTLIVLDDVDNRDQFNAI 297

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    G ++I+TTR+K ++       K +++ L    + +LF   AFG  +     
Sbjct: 298 IGMQEWLCQGCKIIVTTRNKGLIAANDEFVKCKVEPLDNKKSLELFSWHAFGQAYPVEGF 357

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           +E + + + +  G+PLAL+V+G  L G+ +++W SA+++L +IP+ E++ VL ISY SLD
Sbjct: 358 VEDSWRIVHHCNGLPLALRVIGSSLSGKGRKLWGSALQELAMIPNCEVQNVLGISYHSLD 417

Query: 373 DS-QKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDL 418
           D  QKN+FLDIACF  G   D  ++I D               + L+ ++   R+ MH L
Sbjct: 418 DDYQKNIFLDIACFFNGMDVDYAVTILDGLGIGARFRIDKLIDRCLVEINNDKRLWMHQL 477

Query: 419 LRDMGREIVRKES 431
           +RDMGREI R+ES
Sbjct: 478 VRDMGREIARQES 490


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 212/648 (32%), Positives = 332/648 (51%), Gaps = 89/648 (13%)

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLR 178
           F + + R ES+ I+ IA+ +  +L  T  + +K LVG++  +E +   +   +     + 
Sbjct: 2   FCTLLCRDESESIKAIADCISYKLSLTLPTISKELVGIDSRLEVLNGYIGEETGEAIFIG 61

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSE--LSKDG 235
           I G+GGI K T+A  ++++I R FEGS F  NVREA  E  G + LQKKLLS+  + +D 
Sbjct: 62  ICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDI 121

Query: 236 NM----RNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVL 275
           N+      IE    +L R K+ +V DDV                  GSR+IIT+RD  VL
Sbjct: 122 NICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVL 181

Query: 276 KNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGC 335
                 K Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLA +V+G 
Sbjct: 182 IGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLAHEVIGS 241

Query: 336 YLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVI 395
           +L  RS   W  A+ ++  IP  +I +VL++S+D L +S K +FLDIACFL+G  +D + 
Sbjct: 242 FLYERSIPEWRGAINRMNEIPDGKIIDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRIT 301

Query: 396 SIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLW 442
            I ++              +SLI++    ++ MHDLL+ MG+EIVR ES   PG+R+RLW
Sbjct: 302 RILESRGFHAGIGIPVLIERSLISVSR-DQVWMHDLLQIMGKEIVRCESPEEPGRRSRLW 360

Query: 443 HHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVS 502
            ++D+   L  NTG E IE I LDM  + ++   N  AFSKM KLR L+     N   +S
Sbjct: 361 TYEDVCLALMDNTGKEKIEAIFLDMPGI-KDAQWNMEAFSKMSKLRLLKI----NNVQLS 415

Query: 503 HLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFK 560
                   ++R LEW   P K+L   +  ++LV L M  + ++QLW             K
Sbjct: 416 EGPEDLSNKLRFLEWYSYPSKSLPAGLQVDELVELHMANSNLDQLWYGC----------K 465

Query: 561 TPITFEIIDCKM---LERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNN 614
           + +  +II+      L R PD   + NLE L ++G T++ E+  SLG    ++ + L N 
Sbjct: 466 SALNLKIINLSYSLNLSRTPDLTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNC 525

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN------------------------ 650
            ++  +P ++  +  L    +  C +L+  P++  N                        
Sbjct: 526 KSIRILPSNL-EMESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHL 584

Query: 651 --LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
             LGLLS  +C +L+ +P+ +S + S+  ++L  C+ LK  P  L ++
Sbjct: 585 IGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKV 632



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 51/342 (14%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLE------RLPD--ELENLEYLTVKGTTIRE--LPE 598
           +++ P+S+   K+        CK +       RLP    L +LE L +    +RE  LPE
Sbjct: 645 IRQPPASIFLLKSLKVLSFDGCKRIAVNPTDHRLPSLSGLCSLEVLDLCACNLREGALPE 704

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
            +G LS ++ L LS N N   +P+SI  L +L  L +  C  L++LPE+P  +  ++   
Sbjct: 705 DIGFLSSLRSLDLSQN-NFVSLPQSINQLFELERLVLEDCSMLESLPEVPSKVQTVNLNG 763

Query: 659 CTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE--RGIKK---- 712
           C SL+++P  +   SS     +  FL L+  EL E      M  ++ E   +G+      
Sbjct: 764 CISLKEIPDPIKLSSS----KISEFLCLNCWELYEHNGQDSMGLTMLERYLKGLSNPRPG 819

Query: 713 -SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKS 771
             +  PGNEIP WF H+S GSS +++  P    G+  +   AF A    P+   +F+  +
Sbjct: 820 FGIVVPGNEIPGWFNHRSKGSSISVQV-PSWSMGF--VACVAFSANGESPSLFCHFK-TN 875

Query: 772 GEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYDEFS 831
           G +++   +   C   +                 V SDH++L   SF        +   S
Sbjct: 876 GRENYPSPMCISCNSIQ-----------------VLSDHIWLFYLSFDYLIELKEWQHGS 918

Query: 832 F-RIHCSFHFPPYLERGEVKKCGI-----HFVYAQDSADHIL 867
           F  I  SFH      R +VK CG+      ++ +Q S+ H +
Sbjct: 919 FSNIELSFHSSQ--PRVKVKNCGVCLLSSLYITSQPSSAHFI 958


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 220/753 (29%), Positives = 364/753 (48%), Gaps = 112/753 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y+VFLSF+GEDTR NFT HL+  L  K       D +  G+     L   +  S      
Sbjct: 103 YEVFLSFKGEDTRYNFTDHLYVALFRKGFIPL--DWMRSGEKTLHQLFLKLLRS------ 154

Query: 62  FSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM-KRWKNALTEAADLSGFD 120
                 +S WF     P+                    P+ +   W+ + +    +    
Sbjct: 155 ----QGASLWFSQNALPT--------------------PDGVWTNWRGSWSAGTKME--- 187

Query: 121 SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIE----SLLCIGSEGVCK 176
               + E   IE+I   +L R        +K L+G++  +EE+E     ++   S  V  
Sbjct: 188 ----KSEVDYIEDITCVILMRFSHKLLHVDKNLIGMDYHLEEMEEIFPQMMDSISNDVRM 243

Query: 177 LRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG-----------IKDLQK 225
           + I+G+GGI K TIA  ++N+IS  F  + F  N +E  ++ G           I   +K
Sbjct: 244 VGIYGLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQKQLLHDILPRRK 303

Query: 226 KLLSELSKDGNM--------RNIESQLNRLARKKVRIVFDD---VTSGSRVIITTRDKQV 274
             +S + +  +M        + +    +     ++  +  D      GSR+I+TTRDK +
Sbjct: 304 NFISTVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRIIVTTRDKHL 363

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
           L+    +  Y  K+L + +  +LFC  AF  +H    +  +++  + Y  G+PL LKVLG
Sbjct: 364 LEVHEVDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYETVSNFVVHYVNGLPLGLKVLG 423

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV 394
           C+L G++   WES + KLE  P+ EI+ VLK SYD LD +Q ++FLD+ACF  GE +D V
Sbjct: 424 CFLYGKTIRQWESELHKLEWEPNQEIQCVLKRSYDELDCTQ-HIFLDVACFFNGEDKDSV 482

Query: 395 ISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRL 441
             I +A              K LI++ +  +I MHDLL+ MG+ IV +E    PGK +RL
Sbjct: 483 TRILEACKFYAESGMRVLGDKCLISI-VDNKIWMHDLLQQMGQHIVGQEFPEEPGKWSRL 541

Query: 442 WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV 501
           W    + +VL +  GTEAI+GI L+++ + + IH+ + +F+ M  L  L+ Y D     +
Sbjct: 542 WFPDVVSRVLTRKMGTEAIKGILLNLS-IPKPIHVTTESFAMMKNLSLLKIYSDYEFASM 600

Query: 502 SHLEGVPFA--------EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR 551
                V  +        E+R+L W   PL++L  +  AE LV L M  + ++QLW+    
Sbjct: 601 REHSKVKLSKDFEFSSYELRYLYWQGYPLESLPSSFYAEDLVELDMCYSSLKQLWESDML 660

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKG-TTIRELPESLGRLSWVK 607
           L       +   T  +  C+ L  +PD      NLE LT+ G +++ ++  S+G+LS   
Sbjct: 661 L-------EKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLS--- 710

Query: 608 RLILSNNSNLERIPE--SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLE 663
           +LIL N  N +++    SI ++  L  L +S C  L+  P++  N+  L       T++E
Sbjct: 711 KLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIE 770

Query: 664 KLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           +LP+ +  ++ ++ ++L  C  LK  P  + ++
Sbjct: 771 ELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKL 803



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 54/322 (16%)

Query: 551  RLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
            RLPS    F +    ++ DCK++E                     +P S+  L  +K+L 
Sbjct: 960  RLPSGFSCFMSFTNLDLSDCKLIEG-------------------AIPNSICSLISLKKLD 1000

Query: 611  LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLS 670
            LS N  L   P  I  L+ L  L +   + L  +P+LP ++  +   NCT+L   P+ L 
Sbjct: 1001 LSRNDFLS-TPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTALLPGPSSLR 1059

Query: 671  SMSSVL----YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFR 726
            +   V+    Y +  + +      +S +     +   L+E   I  S+ FPG+ IP+W  
Sbjct: 1060 TNPVVIRGMKYKDF-HIIVSSTASVSSLTTSPVLMQKLFE--NIAFSIVFPGSGIPEWIW 1116

Query: 727  HQSMGSSATLKTRPPRPAGYNKLISFAFCAVV-VFPAFLKYFRHKSGEDDWDGNVYAVCC 785
            HQS+GSS  +K   P     +  + FA C+V+   P   +   H + +  + G++     
Sbjct: 1117 HQSVGSS--IKIELPTDWYNDDFLGFALCSVLEQLPE--RIICHLNSDVFYYGDL----- 1167

Query: 786  DWKRKSEGHLYSWFLGKISYVESDHVFLG---CNSFGGEYFGP----NYDEFSFRIHCSF 838
                K  GH + W   K ++V S+HV+LG   C+      F      N+ E SF     F
Sbjct: 1168 ----KDFGHDFHW---KGNHVGSEHVWLGHQPCSQLRLFQFNDPNDWNHIEISFEAAHRF 1220

Query: 839  HFPPYLERGEVKKCGIHFVYAQ 860
            +         VKKCG+  +Y +
Sbjct: 1221 NSS---ASNVVKKCGVCLIYTE 1239



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 6/110 (5%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
           +++ LP+S+C  ++        C  LE  P+   ++ENL+ L + GT+I  LP S+ RL 
Sbjct: 792 NLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLK 851

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            +  L L N  NL  +P+ +  L+ L  L +S C +L  LP+   NLG L
Sbjct: 852 VLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPK---NLGSL 898


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 238/769 (30%), Positives = 383/769 (49%), Gaps = 92/769 (11%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKT-FIDDQLIRGDNISQSLLGTIEASCIAIIIF 62
           VF SFRG+D R  F SHL   L  K + T F D Q+ RG +IS +L+  I  S ++I++ 
Sbjct: 12  VFPSFRGKDVRQTFLSHLIVALDRKLVCTVFKDSQIERGHSISPALVQAIRDSRVSIVVL 71

Query: 63  SERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRFP 100
           S+ YASS W                      FY +DPS VR Q   FG+ F +   K+  
Sbjct: 72  SKNYASSSWCLDELLEILKCREELGQIVMTIFYDLDPSDVRYQIGEFGKAFEKTCEKKTA 131

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNK--GLVGVEC 158
           +  K+W  ALTE A++ G  S     E+ ++++  NDV  +L+ +  S  +   L+G+E 
Sbjct: 132 DVTKQWGLALTEVANIHGHHSRKWDSEAHMVDDFVNDVSCKLNCSQSSSEEFDDLIGIEA 191

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA---------L 209
            I  + SLL + +E V  + IWG  GI K TIA A+F ++S  F+   F           
Sbjct: 192 HIANMVSLLSMDAEQVLMVGIWGPSGIGKSTIARALFGRLSYRFQRCVFIDRSFIDKTLE 251

Query: 210 NVREAE-ETGGIK-DLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVT----- 260
           N R    +  G+K  LQ+K LSE+   KD  + ++     RL   KV IV DDV      
Sbjct: 252 NFRRINLDDYGVKLQLQEKFLSEILDHKDVKIDHLGVLGGRLQNHKVLIVLDDVDDRLLL 311

Query: 261 -----------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                      SGSR+I+ T+D  +L++    + Y +       A ++FCQ AF  +   
Sbjct: 312 DALVGQTLWFGSGSRIIVVTKDVHLLRSHGIERVYEVGFPSEDQALEMFCQSAFKRNSPA 371

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
              ++L  +  K A  +PL L +LG  L GR+KE W   + +L    + +IE  L+  YD
Sbjct: 372 DGFMDLAVEVSKLAGNLPLGLNLLGSSLRGRNKEDWIDMLPELRTCLNGDIERTLRFGYD 431

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLD--LFYRIR 414
            L ++ K +FL IAC   GE  D +  +   S             +SLI +   L   + 
Sbjct: 432 RLKETHKRLFLHIACLFNGEKVDSLKWLLADSDVDVNTGLRVLVERSLIRITTHLCKTVE 491

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MH+LL++MGR +V  +S + PG+R  L   K+I  VL+ N+GT+A+ GIS +++++    
Sbjct: 492 MHNLLQEMGRGMVSAQSFDEPGERQFLTDSKNICDVLEDNSGTKAVLGISWNISEIAELF 551

Query: 475 HMNSYAFSKMPKLRFLRFYG---DKNKCMVSHL-EGVPFAE--VRHLEWPQCPLKTL--N 526
            ++  AF  M  LRFL+ Y    ++N+    +L +G+      +R L W   P+  +  +
Sbjct: 552 TLDEDAFKGMRNLRFLKIYKNPLERNEETKLYLPQGIQSLSRRLRLLHWDAYPMSRMPSD 611

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLE 584
                LV L M  +++E++W+  Q L       K      +   K L+ +PD  +  NLE
Sbjct: 612 FSPAYLVELGMIDSELEKMWEGPQPL-------KYLKNMSLWRSKKLKEVPDLSKAPNLE 664

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
            L +    ++  LP S+  L  +K L +   S LE +P +I +L  L+ L +  C  +++
Sbjct: 665 ELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKLEFLPTNI-NLESLSNLTLYGCSLIRS 723

Query: 644 LPELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNFL-KLDPN 689
            P++  N+ +LS  N T++E++P  +  M+ +  L+++ C  L ++ PN
Sbjct: 724 FPDISHNISVLSLEN-TAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPN 771


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 222/758 (29%), Positives = 356/758 (46%), Gaps = 109/758 (14%)

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           E +++W+ ALTEAA+LSG   +  + E+++I EI + ++  L+    +  K +VG+   +
Sbjct: 11  ETIQKWRTALTEAANLSGCHVDD-QYETEVISEIVDQIVGSLNRQPLNVGKNIVGISVHL 69

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           E+++ ++      V  + I G GGI K TIA A++N+IS  ++GS F  NVRE  + G  
Sbjct: 70  EKLKLMMNTELNKVRVIGICGPGGIGKTTIAQAIYNEISYQYDGSSFLRNVRERSK-GDT 128

Query: 221 KDLQKKLLSELSKDGNMR--NIESQLNRLAR----KKVRIVFDDVTS------------- 261
             LQ +LL  + K    +  NI+  +N + R    K+V ++FDDV               
Sbjct: 129 LQLQNELLHGILKGKGFKISNIDEGVNMIKRCLNSKRVLVIFDDVDELTQLEYLADEKDW 188

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
               S +IIT+RDKQVL     +  Y + +    +A +LF  WAF  +    ++  L+  
Sbjct: 189 FKVKSTIIITSRDKQVLAQYGVDTPYEVHKFNEKEAIELFSLWAFKENLPKGAYKNLSYN 248

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
            I+YA G+PLALK+LG  L G+    WESA+ KL+ IPH+EI +VL+IS+D LDD  K +
Sbjct: 249 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEI 308

Query: 379 FLDIACFLEGEHRDEVISIFDA----------SKSLINLDLFYRIRMHDLLRDMGREIVR 428
           FLD+ACF +G+ +D V  I              K LI +     I MHDL++ MGREI+R
Sbjct: 309 FLDVACFFKGKDKDFVSRILGPHAEYGIATLNDKCLITISK-NMIDMHDLIQQMGREIIR 367

Query: 429 KESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           +E     G+R+R+W   D Y VL +N GT AI+ + L++ K N        +F +M  LR
Sbjct: 368 QECPEDLGRRSRIW-DSDAYNVLTRNMGTRAIKALFLNICKFN-PTQFTEESFKQMDGLR 425

Query: 489 FLRFYGDKNKCMVSHLEGVPFA-----------------EVRHLEWPQCPLKTL--NICA 529
            L+ + D +   +S     P                   E+ +  W    L++L  N  A
Sbjct: 426 LLKIHKDDDYDRISIFRSYPHGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHA 485

Query: 530 EKLVSLKMPCTKVEQLW----------------------------------------DDV 549
           + L +L +  + ++QLW                                        +++
Sbjct: 486 KDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKGCENL 545

Query: 550 QRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELP--ESLGRLS 604
           + LP  +  +K   T    +C  L+R P+    +  L  L + GT I ELP   S   L 
Sbjct: 546 ECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLK 605

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSARNCTS-- 661
            +K L  +  S L +IP  +  LS L  L +S+C  ++  +P   C L  L   N  S  
Sbjct: 606 ALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSND 665

Query: 662 LEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEI 721
              +PA ++ +S +  +NL +   L+   + E+     +  +      +  + + P + +
Sbjct: 666 FRSIPATINQLSRLQVLNLSHCQNLE--HVPELPSSLRLLDAHGPNLTLSTASFLPFHSL 723

Query: 722 PKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
              F  +   S   L   P      N+ + FA C V V
Sbjct: 724 VNCFNSKIQRSETEL---PQNCYQNNEFLGFAICCVYV 758



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 53/262 (20%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTVKGTTIRELPESLGRL 603
            ++++ LP+S+C FK   TF    C  LE  P+ LE+   LE L + G+ I+E+P S+ RL
Sbjct: 950  ENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRL 1009

Query: 604  SWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS-------- 655
              ++ L L+   NL  +PESI +L+ L  L I+ C  L+ LPE   NLG L         
Sbjct: 1010 RGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPE---NLGRLQSLESLHVK 1066

Query: 656  ---ARNC--------------TSLEKLPAGLSSMSSVLYVNL--CNFLK----------- 685
               + NC                L  LP G+S +  + +++L  C  L+           
Sbjct: 1067 DFDSMNCQLPSLSVLLEIFTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALPSSVTY 1126

Query: 686  LDPNELSEIVKDGWMKHSLYEERGI-------KKSMYFP-GNEIPKWFRHQSMGSSATLK 737
            +D ++ + +     +  S + + GI       K  ++ P  N IP+W  HQ  GS  TL 
Sbjct: 1127 VDAHQCTSLKISSSLLWSPFFKSGIQEFVQRNKVGIFLPESNGIPEWISHQKKGSKITL- 1185

Query: 738  TRPPRPAGYNKLISFAFCAVVV 759
            T P      +  + FA C++ V
Sbjct: 1186 TLPQNWYENDDFLGFALCSLHV 1207


>gi|13509234|emb|CAC35337.1| Nbi-C protein [Linum usitatissimum]
          Length = 1107

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 223/779 (28%), Positives = 366/779 (46%), Gaps = 112/779 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y++FLSFRG D R  F  HL+  L     +TF D++ +R G  I  S++  I  S I I 
Sbjct: 31  YEIFLSFRGSDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGAIGPSIIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I +  YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +  +K  PE +  WK AL E   + G+          +I++I  +V   L A ++     
Sbjct: 151 QHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEVELHLRANYKLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+   FE  +F  N+
Sbjct: 211 LVGIDSLVDEVVGLLNLDSSASEKIIGIHGMGGLGKTTLAKAVYDKVFTRFERCFFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDV----- 259
           R+   E  G+  +Q K++S  L KD N     S       +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVLIMQNKIISGILRKDFNEAKYASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      +  SR +ITTRD + L+     K + ++E+    +  LF + AFG +  
Sbjct: 331 FDEVLGKLNNFSMDSRFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGAEFP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+++ ++ A G+PL +KV+G  L    K  WE  + +L+ I   +++E LKISY
Sbjct: 391 PEDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEELKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINL-------D 408
           + L  ++K +FLDIAC+  G  + E I ++                +SLI L       D
Sbjct: 451 NELTHNEKQIFLDIACYFIGLSKIEPILMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
                +MH+ +RD+GR IVR+E+  +P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 DINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +    K+ +LR+L      N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKELEKLTRLRYLSV---SNARLAGDFKDV-LPNLRWLRLHSCDSVPTGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---------- 578
             KLV L++    V   W     L   +      +T E   C  L+++PD          
Sbjct: 625 LNKLVDLELVDCSVRDGWKGWNEL--KVAHKLKAVTLE--RCFHLKKVPDFSDCGDLEFL 680

Query: 579 ---------------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                            ++L +L +  T I ++   +GRL  +K LI S NS+L+ +P  
Sbjct: 681 NFDGCGNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLVNLKYLIAS-NSSLKEVPAG 739

Query: 624 IRHLSKLTFLFISHCERLQT--LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
           I  LS L +L+++  +  ++     LP +L LLS  N  SL  L + L ++S+++  ++
Sbjct: 740 ISKLSSLEWLYLTLTDPYKSDFTETLPASLTLLSCENLQSLSNL-SNLINLSTLILCDV 797


>gi|227438283|gb|ACP30631.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1241

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 235/832 (28%), Positives = 368/832 (44%), Gaps = 162/832 (19%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
           VFL+FRG+  R  F SHL   L    I  F+D    +G ++S SL   IE S IA+ IFS
Sbjct: 19  VFLNFRGKQLRYGFVSHLEKALRRDGINVFVDKNETKGKDLS-SLFSRIEESRIALAIFS 77

Query: 64  ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF-PE 101
             Y  S+W                      FY+VD   V+  +  FG  F  L K    E
Sbjct: 78  SMYTESKWCLNELEKIKECVDLGKLVVIPIFYKVDTDDVKNLNGVFGDKFWELAKTCNGE 137

Query: 102 KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSK------------ 149
           K ++W+ AL       GF       E   I +I  +V+K L +  + +            
Sbjct: 138 KFEKWRQALQNIPQKLGFTLGETSDEGDYINQIVGEVVKVLSSDLERQIPIDNHPCSGAE 197

Query: 150 ---------NKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISR 200
                       L G+E  + ++E  L    E    + + G+ GI K T+   ++ K   
Sbjct: 198 KTPEAAPDLPPPLFGIENRLTQLEMKLDFECENTITIGVVGMPGIGKTTLTKMLYEKWRG 257

Query: 201 HFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNR------LARKKVRI 254
            F    F  +VR+  +   +   +   + EL KD +++   S L+       L  KK  +
Sbjct: 258 EFLRCVFLHDVRKLWKDCKMN--RDIFMRELLKDDDVKQEVSDLSPESLKALLLSKKSLV 315

Query: 255 VFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLF 298
           V D+V+                 GSR+ ITT DK V+K    +  Y +  L   D+ + F
Sbjct: 316 VLDNVSDKSQIETLLGECDWIKRGSRIFITTSDKSVIKGV-VDDTYEVLRLSGRDSFQYF 374

Query: 299 CQWAFGGDHL--DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIP 356
             +AF G     + + + L+   + YA+G PLALK+LG  L  + +  WE  +R L   P
Sbjct: 375 SYFAFSGKLCPPEDNFLNLSRLFVDYAKGNPLALKILGVELSEKDETHWEETLRDLAQSP 434

Query: 357 HVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD----------------A 400
           +  I+ VL+ISY+ L    K+VFLD+ACF      + V  + +                A
Sbjct: 435 NKTIQSVLQISYNGLGQFHKDVFLDVACFFRSGDENYVRCLVESCDTDLVDAASEIKDLA 494

Query: 401 SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAI 460
           SK LIN+    R+ MHDLL   G+E+  + S        RLW+HK +   LKK  G  ++
Sbjct: 495 SKFLINIS-GGRVEMHDLLYTFGKELGSQGS-------RRLWNHKGVVGALKKRKGAGSV 546

Query: 461 EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK------NKCMVSHLEGV--PFAEV 512
            GI LDM+++  ++ ++   F++M  LR+L+FY  +        C ++  EG+  P  EV
Sbjct: 547 RGIFLDMSELKEKLPLDRCTFTEMRNLRYLKFYSSRCHRECEADCKLNFPEGLDFPLDEV 606

Query: 513 RHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP----------SSLCTFK 560
           R+L W + PLK L  +   + L  L M  +++E+LW+ V+  P          S LC   
Sbjct: 607 RYLFWLKFPLKKLPKDFNPKNLTDLNMSFSEIEELWEGVKDTPKLKWVDLSHSSKLCNLT 666

Query: 561 TPITFEIID------CKMLERLPDELENLE---YLTVKG-TTIRELPESLGRLSWVKRLI 610
             +  E +       C  LE LP E+E ++   +L ++G T++R LP     L  +K LI
Sbjct: 667 GLLNAESLQRLNLEGCTSLEELPREMERMKCLVFLNMRGCTSLRVLPHM--NLISMKTLI 724

Query: 611 LSNNSNLE--------------------RIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
           L+N S+L+                    ++P ++  L +L  L +  C+ L  LPE    
Sbjct: 725 LTNCSSLQTFRVVSDNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPEC--- 781

Query: 651 LGLLSA------RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
           LG L A        C+ L+  P  + +M S+        L LD   ++++ K
Sbjct: 782 LGKLKALQELVLSGCSKLKTFPIRIENMKSL------QLLLLDGTSITDMPK 827



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 182/446 (40%), Gaps = 95/446 (21%)

Query: 483  KMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAEKLVSLKMPCTK 541
            +M  L FL   G  +  ++ H+       ++ L    C  L+T  + ++ L +L +  + 
Sbjct: 694  RMKCLVFLNMRGCTSLRVLPHMN---LISMKTLILTNCSSLQTFRVVSDNLETLHLDGSA 750

Query: 542  VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----------------------- 578
            + QL       P+++   +  I   + DCKML  LP+                       
Sbjct: 751  IGQL-------PTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVLSGCSKLKTFP 803

Query: 579  ----ELENLEYLTVKGTTIRELPE-----------------SLGRLSWVKRLILSNNSNL 617
                 +++L+ L + GT+I ++P+                  +  +S ++RL LS N  +
Sbjct: 804  IRIENMKSLQLLLLDGTSITDMPKILQLNSSKVEDWPELRRGMNGISSLQRLCLSGNDII 863

Query: 618  ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
              +   I  L  L  L +  C+ L ++P LP N+ +L A  C  L+ +   ++ +  +  
Sbjct: 864  TNLRIDISLLCHLKLLDLKFCKNLTSIPLLPPNVEILDAHGCGKLKTVATPMAILKHMEK 923

Query: 678  VNLCNFLKLDPNELSEIVKDGWMKHS----------LYEERGIKKSMY---FPGNEIPKW 724
            V+   F+  + N L +  K+    ++           Y+E    ++++   FPG+E+P W
Sbjct: 924  VH-SKFIFTNCNSLEQAAKNSITTYAQKKSQLDALRCYKEGHASEALFITSFPGSEVPSW 982

Query: 725  FRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVC 784
            F H+ +GS  TLK + P     N+L +   CAVV F   +              N +++ 
Sbjct: 983  FDHRMIGS--TLKLKFPPHWCDNRLSTIVLCAVVAFQNEI--------------NSFSIE 1026

Query: 785  CDWKRKSEGHL---YSWFLG----KISYVESDHVFLGCNS---FGGEYFGPNYDEFSFRI 834
            C  + K+E      +S  LG    +   ++SDHVF+G  S         G    +     
Sbjct: 1027 CTCEFKNELGTCTRFSSILGGGWIEPRKIDSDHVFIGYTSSSHITNHVEGSPEHQKCVPT 1086

Query: 835  HCSFHFPPYLERGEVKKCGIHFVYAQ 860
              S  F      GE+  CG+  VY +
Sbjct: 1087 EASIKFKVIDGAGEIVNCGLSLVYEE 1112


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 233/799 (29%), Positives = 387/799 (48%), Gaps = 132/799 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG+DTR +F   L+  +  + +K F D++ + RG+ I+ SL+  +E S  +++
Sbjct: 14  YDVFLSFRGKDTRADFAERLYTEIK-REVKIFRDNEGMERGEEINASLIAGMEDSAASLV 72

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA SRW                      FY+VDPSHVRKQS  F +HF    +RF
Sbjct: 73  LFSPHYADSRWCLDELATLCDLSSSLDRPMIPIFYKVDPSHVRKQSGDFVKHFEAHAERF 132

Query: 100 P-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             E+++ W+ A+     L GF       E  LI  +   VL   + T +   +  VG+E 
Sbjct: 133 SKERIQPWREAMKLVGHLPGFIYREGENEDALIRLVVKRVLAEKNNTPEKVGEYTVGLES 192

Query: 159 SIEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHF-EGSYFALNVRE-AE 215
            ++++ +L+ + S   V  L ++G+GGI K T+A A++ K+  +F E   F  NVRE + 
Sbjct: 193 RVDDLMNLVNVKSSCDVQILGLYGMGGIGKTTLAKALYKKMVEYFKEQRVFISNVRERSS 252

Query: 216 ETGGIKDLQKKLLSEL-SKDGNMRNIESQLNRLAR----KKVRIVFDDVT---------- 260
              G+ +L+K L++EL      + +++   +++      KK+ +V DDV           
Sbjct: 253 GKDGLLNLEKTLITELFDSPPEIEDVDQGRDKIRESVHEKKILVVLDDVDNVDQVNALVG 312

Query: 261 ------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GS ++ITTRD+ +L +   + KY +  L    A KLF   +   +    S ++
Sbjct: 313 ERSWYGEGSLIVITTRDEDILNSLSVSLKYEVNCLSEEQAVKLFSYHSLRKEKPTGSLLK 372

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           L++  +K    +PLA++V G     + ++ W+  ++KLE      + +VLK+S+DSLDD 
Sbjct: 373 LSENIVKITGLLPLAVEVFGSLFYDKKEKEWQVQVKKLENTKPNGLRDVLKVSFDSLDDE 432

Query: 375 QKNVFLDIAC-FLEGEH-RDEVISI-----FDA--------SKSLINLDLFYRIRMHDLL 419
           +K VFLDIAC FL+ +  ++E++ +     F+A         KSL+       + MHD +
Sbjct: 433 EKKVFLDIACLFLKMDMTKEEIVDVLKGCGFNAEAVLKALRQKSLVKFLADNTLWMHDQI 492

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN-- 477
           +DMG ++V KES   PGKR+RLW   +I   +K   GT +I GI LD  K +  +  N  
Sbjct: 493 KDMGMQMVVKESPEDPGKRSRLWDRGEIMNNMK---GTTSIRGIVLDFKKKSMRLDDNPG 549

Query: 478 -----SYA-----------------FSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHL 515
                SY                  F  M KLR L+    +   +  +LE +P ++++ +
Sbjct: 550 TSSVCSYLKNILKPTRTENTIPVEHFVPMKKLRLLQINHVE---LQGNLELLP-SDLKWI 605

Query: 516 EWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID---C 570
           +W  CPLK +  +  + +L  L +  + +       Q     +   +      +++   C
Sbjct: 606 QWRGCPLKDVPASFLSRQLAVLDLSESGIRGF----QSSQLKIVGLQVEGNLRVVNLRGC 661

Query: 571 KMLERLPD--ELENLEYLTVKGTTIR-ELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
             LE +PD    ++LE L  +G  +  E+P S+G L  +  L L N  NL      +  L
Sbjct: 662 DSLEAIPDLSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRNCPNLTEFLVDVSGL 721

Query: 628 SKLTFLFISHCERLQTLPE--------------------LPCN------LGLLSARNCTS 661
             L  L++S C  L  LPE                    LP +      L  LS ++C S
Sbjct: 722 KSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEKLQKLSLKSCRS 781

Query: 662 LEKLPAGLSSMSSVLYVNL 680
           + +LP  + +++S+  ++L
Sbjct: 782 IHELPECIGTLTSLEELDL 800



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)

Query: 548  DVQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLS 604
            +++ LP +    +  +  ++  CK L++LP+    L++L +L ++ T + ELP S G LS
Sbjct: 982  NIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETLVMELPGSFGNLS 1041

Query: 605  WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
             ++ L L NN     +P S++ LS L  L +  C+ L  LP LPCNL  L+  NC SLE 
Sbjct: 1042 NLRVLNLGNN-KFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCSLES 1100

Query: 665  LPAGLSSMSSVLYVNLCN 682
            + + LS ++ +  +NL N
Sbjct: 1101 I-SDLSELTMLHELNLTN 1117



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 16/144 (11%)

Query: 537 MPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGT 591
           M C K E L D+  ++ LP S+   +      +  C+ +  LP+    L +LE L +  T
Sbjct: 745 MLCLK-ELLLDETAIKNLPGSIFRLEKLQKLSLKSCRSIHELPECIGTLTSLEELDLSST 803

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           +++ LP S+G L  +++L + + ++L +IP++I  L+ L  L I        + ELP +L
Sbjct: 804 SLQSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQELIIDG----SAVEELPLSL 859

Query: 652 GLLSARNCTSLEKLPAGLSSMSSV 675
                    SL K+P  ++ ++S+
Sbjct: 860 ------KPGSLSKIPDTINKLASL 877


>gi|13509213|emb|CAC35326.1| Ngc-C protein [Linum usitatissimum]
          Length = 1120

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 236/811 (29%), Positives = 379/811 (46%), Gaps = 122/811 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y++FLSFRG D R  F  HL+  L     +TF D++ L +G  I  SL+  I  S I I 
Sbjct: 31  YEIFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGTIGPSLIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  IMTQNYASSKWCLQELAKMVDCWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +  +K  PE +  WK AL E   + G+          +I++I  +V   L A +      
Sbjct: 151 QHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEVELHLGANYTLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      +  SR +ITTRD + L+     K + ++E+    +  LF + AFG +  
Sbjct: 331 FDEVLGKLNNFSMDSRFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGAEFP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+++ ++ A G+PL +KV+G  L    K  WE  + + + I   +++E LKISY
Sbjct: 391 PEDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINL-------D 408
           + L  ++K +FLDIAC+  G ++ E + ++                +SLI L       D
Sbjct: 451 NELTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
                +MH+ +RD+GR IVR+E+  +P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 DINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +    K+ +LR+L      N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKELEKLTRLRYLSV---SNARLAGDFKDV-LPNLRWLRLHSCDSVPTGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---------- 578
             KLV L++    V   W     L   +      +T E   C  L+++PD          
Sbjct: 625 LNKLVDLELVDCSVRDGWKGWNEL--KVAHKLKAVTLE--RCFHLKKVPDFSDCGDLEFL 680

Query: 579 ---------------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                            ++L +L +  T I ++   +GRL  +K LI S NS+L+ +P  
Sbjct: 681 NFDGCRNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLLNLKYLIAS-NSSLKEVPAG 739

Query: 624 IRHLSKLTFLFISHCE--RLQTLPELPCNLGLLSARN-----C--TSLEKLPAGLSSMSS 674
           I  LS L +L ++  +  +L     LP +L  LS  N     C  TSLE L   L ++S+
Sbjct: 740 ISKLSSLKWLSLTLTDPYKLDFTEMLPASLTFLSILNDTEKSCPDTSLENLQR-LPNLSN 798

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKHSLY 705
           +  +NL     +D   + EI+  G +K   Y
Sbjct: 799 L--INLSVLFLMDVG-IGEILGLGKLKMLEY 826


>gi|227438171|gb|ACP30575.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1609

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 239/828 (28%), Positives = 376/828 (45%), Gaps = 169/828 (20%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +YDVFLSFRGED R  F SH+      K I+ FID+++ RG ++  +L   I  S +AI+
Sbjct: 249 LYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGPTLEKAIRQSRVAIV 308

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKR 98
           + S  YASS W                      FY VDPS VRKQ   FG+ F      R
Sbjct: 309 LLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVRKQIGDFGKAFDDTCVGR 368

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             E    W+ AL E AD++G+ S+    E+ LI E+A++V+ R                 
Sbjct: 369 TEEVTHVWRQALKEVADIAGYASSNCGSEADLINELASNVMAR----------------- 411

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            + +++++L + ++ V  + IWG  GI K T A  +++++S  F+ S F  N++   +  
Sbjct: 412 -VTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRS 470

Query: 219 GIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
              D       Q+KLLS++   KD  +R++     +L+ +KV +V D+V S         
Sbjct: 471 FGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWWQLEEVAN 530

Query: 262 ------GSRVIITTRDKQVLK--NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                 GS VIITT D+++LK     AN+ Y+MK     +A ++ C +AFG    +    
Sbjct: 531 RAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFE 590

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
            L  +  + A  +PL L+V+G YL G SK+ W  A+  L      EIE  LK+SY+ L +
Sbjct: 591 TLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLSYNVLSN 650

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDAS--------KSLINLDLFYR----IRMHDLLRD 421
            +K++FL IACF  G   D V SI + S        ++L    L YR    + MH LL+ 
Sbjct: 651 KEKSLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGYVEMHSLLQQ 710

Query: 422 MGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAF 481
           MG+EI                             GT  + GI L +     EI ++  AF
Sbjct: 711 MGKEI-----------------------------GTGTVLGIKL-LKLEGEEIKISKSAF 740

Query: 482 SKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPC 539
             +  L+FL   G         L  +P  ++R++ W Q PL+        + LV L MP 
Sbjct: 741 QGIRNLQFLDIDGGTLN-TPEGLNCLP-NKLRYIHWKQSPLRFWPSKFSEKLLVELIMPN 798

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK-GTTIREL 596
           +  E+LW+ ++  P   C  +     ++   + L+ +PD  +  +LE L +    ++ EL
Sbjct: 799 SNFEKLWEGIKPFP---CLKR----MDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLEL 851

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           P S+GRL  +++L L    +LE+               +S C  L+ L      +G L  
Sbjct: 852 PSSIGRLINLEKLDLHYCRSLEK---------------LSGCSSLKELDLSDSGIGAL-- 894

Query: 657 RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYF 716
                  +LP+ +S+ S         F +L+ + LS++ K   + +S+ E       +  
Sbjct: 895 -------ELPSSVSTWSC--------FYRLNMSGLSDLKKFPKVPYSIVE-------LVL 932

Query: 717 PGN---EIPKW----FRHQS--MGSSATLKTRPPRPAGYNKLISFAFC 755
            G    E+P W    FR Q   M     L+   P  +    L + A C
Sbjct: 933 SGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENLQTIALC 980


>gi|297794833|ref|XP_002865301.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311136|gb|EFH41560.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1164

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 294/1095 (26%), Positives = 451/1095 (41%), Gaps = 258/1095 (23%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF++FRGED R  F SHL   L   +IK FID+   +G+ + ++LL  I+ S IA+ I
Sbjct: 15   HQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPL-ETLLTKIQESRIALAI 73

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FS +Y  S W                      FY++DPS VR     FG  F  L +R  
Sbjct: 74   FSGKYTESTWCLRELAMIKDCVEKGNLVAIPIFYKLDPSTVRGVRGKFGDAFRDLEERDV 133

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEI-------------------------- 134
             K K WK AL    DL G   +   PES+++ EI                          
Sbjct: 134  LKKKEWKKALKWIPDLIGITVHDKSPESEILNEIVREVKKVLKKVPLKGSRNFFVEPSEG 193

Query: 135  ----ANDVLKRLDA--TFQSKNKGLVGVECSIEEIESLL-CIGSEGVCKLRIWGIGGISK 187
                A D  + +D   + + +     G++  ++E+E  L  I  +G   + + G+ GI K
Sbjct: 194  SRKVAVDRSEIIDTRTSAEGEKDKTFGIKQQLKELEDKLDLIKYKGTRVIGVVGMPGIGK 253

Query: 188  ITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIES----- 242
             T+   ++      F        +R       ++ L   LL +L  + N   I+S     
Sbjct: 254  TTLLKELYKTWKGKFSRYALIDQIRGKSNNFRLECLPTLLLEKLLPELNNPQIDSVEEPY 313

Query: 243  --QLNRLARKKVRIVFDDVT----------------------SGSRVIITTRDKQVLKNC 278
                  L  +KV +V DDV+                       GSR++I T DK +LK  
Sbjct: 314  KTHKGLLRERKVLVVLDDVSEREQIYALLGKYDLQNKHEWIKDGSRIVIATNDKSLLKG- 372

Query: 279  WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE---LTDKAIKYAQGVPLALKVLGC 335
              +  Y +++L + D  +LF   AF  D      ++   L+D+ + YA+G PLALK+LG 
Sbjct: 373  LVHDTYVVRQLNHRDGLQLFRYHAFHDDQAITPKVDFMKLSDEFVHYARGHPLALKILGR 432

Query: 336  YLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVI 395
             L  ++ + WE+ ++ L   P   I EV+++S+D L  +QK+ FLDIACF   +  D V 
Sbjct: 433  ELYEKNMKHWETKLKILAQSPTTYIGEVVQVSFDELSMAQKDAFLDIACF-RSQDVDYVE 491

Query: 396  SIF--------DASKSLINLDLF----YRIRMHDLLRDMGREIVRKESINHPGKRNRLWH 443
            S+         +A K+L N  L      R+ MHDLL    RE+  + S     K+ RLW 
Sbjct: 492  SLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYTFSRELDLRASTQGGSKQRRLWL 551

Query: 444  HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD-------- 495
             +DI  V +K  G   + GI LD+++V  E  ++   F  +  LR+L+FY          
Sbjct: 552  QQDIINVQQKTMGAADVRGIFLDLSEVKGETSLDREHFKNICNLRYLKFYNSHCPQECKT 611

Query: 496  KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP 553
             NK  +     +P  EVR L W + PL+ L  +     LV LK+P +++E+LW+ V+  P
Sbjct: 612  NNKINMPDGLELPLKEVRCLHWLKFPLEELPNDFDPINLVDLKLPYSEIERLWEGVKDTP 671

Query: 554  ----------SSLCTFK----------------------------TPITFEIIDCKMLER 575
                      S LC+                              +  T  + +C   + 
Sbjct: 672  VLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRDVNLMSLKTLTLSNCSNFKE 731

Query: 576  LPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSN---LERIPESIRHLSKLTF 632
             P   ENLE L + GT I +LP+++  L   KRL+L N  +   LE IP  +  L  L  
Sbjct: 732  FPLIPENLEALYLDGTVISQLPDNVVNL---KRLVLLNMKDCKMLENIPTCVGELKALQK 788

Query: 633  LFISHCERLQT------------------------------------------------- 643
            L +S C +L+                                                  
Sbjct: 789  LILSGCLKLKEFPEINKSSLKILLLDGTSIKTMPQLPSVQYLCLSRNDQISYLPVGINQL 848

Query: 644  --LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
              +PELP  L  L A  C+SL+ +   L+ + S +  N C F   +   L +  K+    
Sbjct: 849  TYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQ-NHCTFNFTNCGNLEQAAKEEITS 907

Query: 702  HSL------------YEERGIKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
            ++             Y E    ++++   FPG E+P WF H+ +GS   L  R   P  +
Sbjct: 908  YAQRKCQLLPDARKHYNEGLNSEALFSTCFPGCEVPSWFGHEVVGS---LLQRKLLPHWH 964

Query: 747  NKLIS-FAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLYSWFLGKIS 804
            +K +S  A CAVV F             D+ D  + ++V C +K K+E   +  F   + 
Sbjct: 965  DKRLSGIALCAVVSFL------------DNQDQISCFSVTCTFKIKAEDKSWVPFTCPVG 1012

Query: 805  Y----------VESDHVFLG---CNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG---- 847
                       +ESDHVF+    C          N D+ +F    S  F           
Sbjct: 1013 IWTREGDQKDKIESDHVFIAYISCPHSIRCLEDENSDKCNF-TEASLEFTVTSGTSGVGV 1071

Query: 848  -EVKKCGIHFVYAQD 861
             +V KCG+  VY  D
Sbjct: 1072 FKVLKCGLSLVYEND 1086


>gi|13509209|emb|CAC35323.1| Ngc-A protein [Linum usitatissimum]
          Length = 1075

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 220/786 (27%), Positives = 372/786 (47%), Gaps = 121/786 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L    I+TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRQTFADHLYTSLVRSKIRTFRDEEGLQKGETIGPSLIQAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           FY +DP  VR   S  +   F 
Sbjct: 91  ILTQNYASSKWCLQELAKMVNCWKNGGEAKGQHIIIPVFYFMDPRDVRHPDSGPYKESFE 150

Query: 94  RLR-KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +   K  PE +  WK AL E   + G+  + +  +  ++++I  +V   L A +      
Sbjct: 151 QHNLKHDPETILEWKGALQEVGKMKGWHISELTGQGAVVDKIFTEVELHLRANYTLATDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           LVG++ S++E+  LL + S     + I+G+G + K T+A AV+NK+S  FE   F  N+R
Sbjct: 211 LVGIDFSVDEMVKLLNLDSTSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCCFLDNIR 270

Query: 213 EAE-ETGGIKDLQKKLLSE-LSKD-----GNMRNIESQLNRLARKKVRIVFDDV------ 259
           E   +  G+  LQ K++S+ L KD          ++    R++R K+ +V DDV      
Sbjct: 271 ETLLKNDGVVALQNKVISDILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRF 330

Query: 260 ----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                     ++ SR ++TTRD + L+     K ++ + + +  + KLF + AFG D+  
Sbjct: 331 DDIFGKLTAFSADSRFLVTTRDARTLERLRGCKLFKHEGMSHDHSLKLFSKHAFGVDYPP 390

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             +  L ++ ++   G+PLALKV+G  L    K  W+  + +L+ IP V ++  LKISY+
Sbjct: 391 EDYASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNVQYRLKISYN 450

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L D++K +FLD+AC   G  ++  I ++                +SL+ ++      MH
Sbjct: 451 ELTDNEKQIFLDVACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMH 510

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           D +RD+GR IV +ES N   KR+R+W + D   +LK   G + +E + +DM        +
Sbjct: 511 DHIRDLGRAIVCEESQNLY-KRSRIWSNNDAIDILKNREGNDCVEALRVDMR--GEGFAL 567

Query: 477 NSYAFSKMPKLRFLRFY-GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
            +  F +  +LRFL    GD +    + L  + +  V H +   CP   LN+   KL+ L
Sbjct: 568 TNEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWLRVYHGD--PCP-SGLNL--NKLMIL 622

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----------------- 578
           ++  + V   W+    + ++           ++ CK LE++PD                 
Sbjct: 623 ELEVSDVTDSWEGWNEIKAA----GKLKVVHLMCCKGLEKVPDLSTCRGLELLRFSICRR 678

Query: 579 --------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
                     ++L+ L +  T I  L   +  L  +++L +  +S L  +P  I  LS L
Sbjct: 679 MHGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVG-SSGLIEVPAGISKLSSL 737

Query: 631 TFLFISHC--ERLQTLPE--------------LPCNLGLLSARNCTSLEKLPAGLSSMSS 674
            +L +++   ++++TLP               LP +L  L  R  T+L +LP  L+S+++
Sbjct: 738 EYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLFRLDVRYSTNLRRLP-NLASVTN 796

Query: 675 VLYVNL 680
           +  + L
Sbjct: 797 LTRLRL 802


>gi|227438265|gb|ACP30622.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1459

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 232/759 (30%), Positives = 356/759 (46%), Gaps = 116/759 (15%)

Query: 1   MYDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAII 60
           +Y VFLSFRG D R  F SH+   L  K I  FID+++ RG+++   L+G I  S +A++
Sbjct: 12  LYHVFLSFRGVDVRKGFLSHVLKELKSKGILPFIDNEIKRGESVGPVLVGAIRQSRVAVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + S  YA S W                      FY VDPSHVRKQ+  FG+ F       
Sbjct: 72  LLSRNYAYSSWCLDELVEIMKCRKEDQQKVMTIFYEVDPSHVRKQTGDFGKAFDETCVGK 131

Query: 100 PEKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            E++K+ WK AL E A ++G+D +    E+ LI ++A+DV   L  T        VG+  
Sbjct: 132 TEEVKQAWKQALKEVAGIAGYDFSNCDNEADLINKVASDVAAMLGFTPSKDFDEFVGI-A 190

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            I EI+S L + SE V  + I G  GI K + A  ++N++S  F  S F  N+R   E  
Sbjct: 191 RIIEIKSKLILQSEEVKVIGIVGPAGIGKTSTARVLYNQLSPCFPFSTFLENIRGNYEKP 250

Query: 219 GIKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
              +      L +  LS+L   KD  + ++    N L+ KKV  V D+V S         
Sbjct: 251 CGDNYSLKLRLHQNFLSQLLNQKDIVVGHLGVAQNMLSDKKVLAVLDEVDSWWQLEEMAK 310

Query: 262 -------GSRVIITTRDKQVLKN--CWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                  GS VIITT D ++LK      +  Y+M+     ++ ++FCQ+AF  +      
Sbjct: 311 QREWVGPGSIVIITTEDVKLLKQLRLGIDHIYKMEFPTCYESLEIFCQYAFDQNSPYDGF 370

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             L  +    A  +PL L+V+G YL G S + W  A+ +L                    
Sbjct: 371 EGLAREVTWLAGNLPLGLRVMGSYLRGMSMDYWIKALPRLR------------------- 411

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESI 432
                                  +   A KSLI++D    + MH LL+ +GREIV+K+S+
Sbjct: 412 --------------------NSTAWPQAHKSLISIDYRGYVEMHSLLQQLGREIVKKQSL 451

Query: 433 NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
               +R  L   KDI+ +L +NT T  + GI LD +    EIH++  AF  M  L+FL  
Sbjct: 452 K---ERQFLMDAKDIFDLLDENTVTGKVLGIMLDTSYQREEIHISKSAFEGMNSLQFLTV 508

Query: 493 YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLK--TLNICAEKLVSLKMPCTKVEQLWDDVQ 550
              KN C++  L  +P  ++R L W  C L+       AE LV L MP +K E+LW+ +Q
Sbjct: 509 -NSKNLCILEGLTCLP-EKLRLLCWNSCKLRFWPSKFSAEFLVELIMPNSKFEKLWEGIQ 566

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRLSWVK 607
            L       +      ++    L+ +PD     +LE L + G  ++ E+  S+G  + +K
Sbjct: 567 PL-------QCLKLMNLLGSCYLKEIPDLSNATSLEELVLCGCKSLLEITSSIGNATKLK 619

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC-------- 659
           +  L     L+ +P SI  L  L  L +++C  L+ L     +L  LS  +         
Sbjct: 620 KCNLFGCLLLKELPSSISRLINLEELNLNYCWSLKALSVFS-SLEKLSGCSSLKELRLTR 678

Query: 660 TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVK 696
           T++E++P+ +S+ S +  +++  C  LK  PN    IV+
Sbjct: 679 TAIEEVPSSMSTWSCLYELDMSGCTNLKEFPNVPDSIVE 717



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 20/147 (13%)

Query: 617 LERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
           L+ IP+ I  LS L+ L I+ C +L+ LP+LP  L  L A+NC SLE + +  S  +  +
Sbjct: 836 LKTIPDCIGFLSGLSELDITECRKLRALPQLPAALISLDAQNCESLESIDSS-SFQNPNI 894

Query: 677 YVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATL 736
           +++  N   L+  E   +++    K+++            PG ++P  F HQ+     T+
Sbjct: 895 HLDFANCFNLN-QEARRLIETSACKYAV-----------LPGRKVPAHFTHQATSGCLTI 942

Query: 737 KTRPP-RPAGYNKLISFAFCAVVVFPA 762
              P   P+      SF F A ++ P 
Sbjct: 943 NLSPKCLPS------SFRFRACILVPT 963



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 18/104 (17%)

Query: 77   DP-SHVRKQSHSFGRHFSRLRKRFPEKMKR-WKNALTEAADLSGFDSNVIRPESKLIEEI 134
            DP  ++RKQ   FG+ F        E++K+ W+ AL + A ++G+ S+    E+ LI ++
Sbjct: 1338 DPVDNLRKQKGDFGKVFDETCVGKTEEVKQAWRQALEDVAGIAGYHSSNSDSEADLINKV 1397

Query: 135  ANDV----------------LKRLDATFQSKNKGLVGVECSIEE 162
            A+DV                LK L ++ ++KN+   G E   +E
Sbjct: 1398 ASDVTAVLGFTPSKVSYCRLLKELPSSMEAKNETEEGEESGRDE 1441


>gi|8778469|gb|AAF79477.1|AC022492_21 F1L3.30 [Arabidopsis thaliana]
          Length = 1075

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 223/706 (31%), Positives = 334/706 (47%), Gaps = 79/706 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR    SHL+  L  + I TF DDQ +  GD+IS  L   + +S  A++
Sbjct: 12  YDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELHRALGSSSFAVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR-HFSRLRKR 98
           + SE YA+SRW                      FY VDPS VR Q  SF    +  L   
Sbjct: 72  VLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRHQLGSFSLVKYQGLE-- 129

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +K+ RW+ AL   A+LSG  S+    E+ ++ EIA D+ +R+    +  +  +VG++ 
Sbjct: 130 MVDKVLRWREALNLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLMHKIDSGNIVGMKA 189

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E +  LL   S  V  + IWG+GGI K +I   +++++S  F    F  N++   +  
Sbjct: 190 HMEGLNHLLDQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVSKDN 249

Query: 219 G--IKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVTS---------- 261
           G  +K LQK+LLS  L  D  + ++E+       RL  +KV +V D V            
Sbjct: 250 GHDLKHLQKELLSSILCDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHALAKE 309

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GGDHLDASHIE 314
                 GSR+IITTRD  +L  C     Y +K L   DA ++F Q AF GG        +
Sbjct: 310 KNWFGPGSRIIITTRDMGLLNTCGVEVVYEVKCLDDKDALQMFKQIAFEGGLPPCEGFDQ 369

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGR--SKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           L+ +A K A G+P A++    +L GR  S E WE A+  LE      I E+LKISY+ L 
Sbjct: 370 LSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLDENIMEILKISYEGLP 429

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLL 419
              +NVFL + C   G+    + S+               A KSLI +     + MH L+
Sbjct: 430 KPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLV 489

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
             MGREI+R +       R  L    +I   L    G E  E + L    +   + M + 
Sbjct: 490 EQMGREIIRDD---MSLARKFLRDPMEIRVALAFRDGGEQTECMCLHTCDMTCVLSMEAS 546

Query: 480 AFSKMPKLRFLRFYG--DKNKCMVSHLEGVPFA--EVRHLEWPQCPLKTLNICAEK--LV 533
              +M  L+FL+ Y   D  +  +  +   PF    +R   W   PL+ L   ++   LV
Sbjct: 547 VVGRMHNLKFLKVYKHVDYRESNLQLIPDQPFLPRSLRLFHWDAFPLRALPSGSDPCFLV 606

Query: 534 SLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIID-CKMLERLPDELENLEYLTVKGTT 592
            L +  + +E LW      PS+    + P      +   +L  L   L++L+ L V G+ 
Sbjct: 607 ELNLRHSDLETLWSGT---PSNGVKTENPCEKHNSNYFHVLLYLAQMLKSLKRLDVTGSK 663

Query: 593 -IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
            +++LP+ L  ++ ++ L+L   + LE IPE I   S L  L +S+
Sbjct: 664 HLKQLPD-LSSITSLEELLLEQCTRLEGIPECIGKRSTLKKLKLSY 708



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 577 PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
           PD   +L+ L +    IR++P  +  L  +++L LS N + E +PE++  LS+L  L++ 
Sbjct: 819 PD-FPDLKELKLVNLNIRKIPSGICHLDLLEKLDLSGN-DFENLPEAMSSLSRLKTLWLQ 876

Query: 637 HCERLQTLPELP--CNLGLLSARNCTSLEKL 665
           +C +LQ LP+L     L L + RN  SL KL
Sbjct: 877 NCFKLQELPKLTQVQTLTLTNCRNLRSLAKL 907



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 40/209 (19%)

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
           LR +RF   +N    S      F +++ L+     ++ +   IC   L+       K++ 
Sbjct: 799 LRIMRFSHKENGESFSFDVFPDFPDLKELKLVNLNIRKIPSGICHLDLLE------KLDL 852

Query: 545 LWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGT------------- 591
             +D + LP ++ +     T  + +C  L+ LP +L  ++ LT+                
Sbjct: 853 SGNDFENLPEAMSSLSRLKTLWLQNCFKLQELP-KLTQVQTLTLTNCRNLRSLAKLSNTS 911

Query: 592 -----------------TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLF 634
                            ++  L + L   + +  L LSN+ + E +P SIR L+ L  L 
Sbjct: 912 QDEGRYCLLELCLENCKSVESLSDQLSHFTKLTCLDLSNH-DFETLPSSIRDLTSLVTLC 970

Query: 635 ISHCERLQTLPELPCNLGLLSARNCTSLE 663
           +++C++L+++ +LP +L  L A  C SLE
Sbjct: 971 LNNCKKLKSVEKLPLSLQFLDAHGCDSLE 999


>gi|13509225|emb|CAC35332.1| N2-B protein [Linum usitatissimum]
          Length = 1108

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 236/812 (29%), Positives = 384/812 (47%), Gaps = 135/812 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L    I+TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRQTFADHLYAWLVRSKIRTFRDEEGLQKGETIGSSLIQAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           FY +DP  VR   S  +   F 
Sbjct: 91  ILTQNYASSKWCLQELAKMVDCWKNGGGGKGQHIILPVFYFMDPRDVRHPDSGPYKEAFE 150

Query: 94  RLR-KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +   K  PE +  WK AL +   + G+  N +  +  ++++I   +   L A +      
Sbjct: 151 QHNLKHDPETILEWKEALQDVGKMKGWHINELTGQGAVVDKIFTTIEFHLRANYTLATDE 210

Query: 153 LVGVECSIEEIESLLCIG---SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
           LVG++ S+EE+  L+ +    SE +  + I+G+GG+ K T+A AVFNK+S  FE   F  
Sbjct: 211 LVGIDSSVEEVMELMNLDHSTSERI--IGIYGMGGLGKTTLAKAVFNKVSMQFERCCFLD 268

Query: 210 NVREAE-ETGGIKDLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDV--- 259
           N+RE      G+  LQ K++S+ L KD +     S        R+ R K+ +V DD+   
Sbjct: 269 NIRETLLRNDGVVALQNKVISDILRKDSDQAKNASDGVRIIRERVRRHKIFVVLDDIDES 328

Query: 260 -------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                        ++ SR +ITTRD + L+     K + ++E+ +  + +LF + AFG D
Sbjct: 329 FHFDEIFGKLGDFSTDSRFLITTRDARTLELLNECKMFGLEEMSHDHSLQLFSKHAFGVD 388

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
           +    +  L ++ I+ A G+PLALKV+G  L    K  WE  + +L+ IP  +++E LK+
Sbjct: 389 YPPEDYASLCEEFIQVASGLPLALKVIGSLLFKSDKRFWEDKLIELKAIPSAKVQERLKV 448

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVI------SIFDAS-------KSLINLDLFYRI 413
           SY+ L  ++K +FLDIAC   G  ++  +       ++ AS       +SL+ +D     
Sbjct: 449 SYNELTHNEKQIFLDIACLFVGAKKEVPMYMWSDCDLYPASTLRTLVQRSLVRMDDNKMF 508

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK---- 469
            MHD +RD+GR IVR+E+  +P KR+R+W + D   +LK   G + +E + +DM      
Sbjct: 509 WMHDHIRDLGRTIVREENSQNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDMKGEGYA 568

Query: 470 -VNREIH--------------MNSYAFSKMPKLRFLRFY-GDK-------NKCMVSHLEG 506
             N+E +              ++    + +P LR+LR Y GD        NK ++  L+G
Sbjct: 569 LTNKEFNQFSRLRFLEVLNGDLSGNFKNILPNLRWLRVYRGDPSPSGLNLNKLVILELDG 628

Query: 507 VPFAEVRHLEWPQC----PLKTLNICA----EKLVSLKMPCTKVEQL------WDDVQRL 552
             +       W +      LK +N+ +    EK+  L   C  +E L      W    R 
Sbjct: 629 C-YVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLS-TCRGLELLCFHKCQW---MRG 683

Query: 553 PSSLCTFKTPITFEI--IDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
              + TFK     +I   +   L+   + L+NL+ L V  + + E+P  + +LS ++ L 
Sbjct: 684 ELDIGTFKDLKVLDINQTEITTLKGEVESLQNLQQLDVGRSGLIEVPAGISKLSSLEFLD 743

Query: 611 LSN--NSNLERIPESIRHL-----------SKLTFLFISHCERLQTLPELP--CNLGLLS 655
           L++  +  +E +P  ++ L           S L  L I     LQ LP L    NL  L 
Sbjct: 744 LTSVKHDEVEMLPNGLKLLVISSFSLSALPSSLIKLDICDSRNLQRLPNLASVTNLTRLH 803

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            +    + ++P GL  +  +  +++CN   LD
Sbjct: 804 LKE-VGIHEIP-GLGKLKLLESLSICNAPNLD 833


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 222/738 (30%), Positives = 353/738 (47%), Gaps = 144/738 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFR                         D +L  GD++S+ L+  I+ S +A+II
Sbjct: 23  YDVFLSFRD------------------------DKRLENGDSLSKELVKAIKESQVAVII 58

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YA+SRW                      FY VDPS VRKQ+ SF   F+    R+ 
Sbjct: 59  FSKNYATSRWCLNEVVKIMECKEENGQLVIPVFYDVDPSDVRKQTKSFAEAFAEHESRYK 118

Query: 101 ------EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
                 +K++RW+ AL+EAADL G+D    R ES+ I E+ N++  +L  T  S    +V
Sbjct: 119 DDVEGMQKVQRWRTALSEAADLKGYDIRE-RIESECIGELVNEISPKLCETSLSYLTDVV 177

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  ++++ SLL +  + V  + IWG+GG+ K TIA A+F+ +S  F+G+ F  + +E 
Sbjct: 178 GIDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNKEN 237

Query: 215 EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLAR----KKVRIVFDDVT-------- 260
           +    I  LQ  LLS+L   K+  + + E   + +AR    KKV +V D++         
Sbjct: 238 KYE--IHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYL 295

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                   +G+R+I TTRDK  ++    +  Y +  L+  DA +LF Q+AF  +  D   
Sbjct: 296 AGDLGWFGNGTRIIATTRDKHFIRK--NDAVYPVTTLLEHDAVQLFNQYAFKNEVPDKCF 353

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
            E+T + + +A+G+PLALKV G  L  +   VW SA+ +++  P  ++ E LK+SYD L+
Sbjct: 354 EEITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYDGLE 413

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLL 419
              + +FLDIACFL G  + E+  I ++              KSL+ +  +  I+MHDL+
Sbjct: 414 REDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDLI 473

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLK-KNTGTEAIEGISLDMNKVNREIHMNS 478
           ++MG+ IV  +     G+  RLW  +D  +    K  GT+AIE I +      +++    
Sbjct: 474 QEMGKYIVTMQ--KDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWI---PEIQDLSFRK 528

Query: 479 YAFSKMPKLRFLRFY------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKL 532
            A   + KLR L         G  ++ + S+L    + +     W   P K      + L
Sbjct: 529 KAMKDVEKLRILYINGFHTPDGSNDQYLPSNLR---WFDCCKYPWESLPAK---FDPDML 582

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG 590
           V L +  + +  LW   ++ P            ++  C  L R PD  ++ NLEYL    
Sbjct: 583 VHLDLQQSSLFHLWTGTKKFPFLR-------RLDLSSCANLMRTPDFTDMPNLEYLG--- 632

Query: 591 TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPC- 649
                               L   SNL+ +  S+R   KL  L +  C+ L++   + C 
Sbjct: 633 --------------------LEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESFSYV-CW 671

Query: 650 -NLGLLSARNCTSLEKLP 666
            +L  L  + C++LEK P
Sbjct: 672 ESLECLHLQGCSNLEKFP 689



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 36/177 (20%)

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERL 641
           NL Y  +K      LP+ +G LS ++ L L  N N E +P+S+  LS L  L +  C+ L
Sbjct: 829 NLSYCNLKDEG---LPQDIGSLSSLEVLNLRGN-NFEHLPQSLTRLSSLQSLDLLDCKSL 884

Query: 642 QTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMK 701
             LPE P  L  + A              S+ + L+ N+ +F                 +
Sbjct: 885 TQLPEFPRQLDTIYA---------DWNNDSICNSLFQNISSF-----------------Q 918

Query: 702 HSLYEERGIKKSMYFPGNE---IPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFC 755
           H +     +  S+    NE   IP+WF HQ    S ++K  P      +  + FA C
Sbjct: 919 HDICASDSL--SLRVFTNEWKNIPRWFHHQGKDKSVSVKL-PENWYVCDNFLGFAVC 972


>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
          Length = 1232

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 284/1121 (25%), Positives = 441/1121 (39%), Gaps = 273/1121 (24%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF++FRG + R  F SHL   L  + I  FID +   G  + ++L   I+ S IAI++
Sbjct: 19   HKVFINFRGAELRHKFISHLLKALERERINVFIDTRETMGTGL-ENLFQRIQESKIAIVV 77

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
             S RY  S+W                      FY+VD   VR  + SFG     L  R  
Sbjct: 78   ISSRYTESQWCLNELVKIKECVEAGTLVVFPVFYKVDVKIVRFLTGSFGEKLETLVLRHS 137

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIAN---DVLKRLDA------------- 144
            E+ + WK AL      +G        E   +E+I     ++L+ +               
Sbjct: 138  ERYEPWKQALEFVTSKTGKRVEENSDEGAEVEQIVEHVKEILRTISGEIPRGRESESPRG 197

Query: 145  ---------TFQSKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAV 194
                     T  S +  L G+E  +E+++  L + SE V + + + G+ GI K T+A  +
Sbjct: 198  EGEGEAEPKTTPSDDSLLHGIETRVEQLKEKLELKSENVTRFIGVVGMPGIGKTTLAKRL 257

Query: 195  FNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL------SKDGNMR--NIESQLNR 246
            F++  +HF    F  +V +  E    + L   LL  L       +DGN    +I+    +
Sbjct: 258  FSECGKHFLHKMFLDDVSQKPEPFLDETLHTDLLLGLWKSKNNGRDGNRAKLSIDYIKTQ 317

Query: 247  LARKKVRIVFDDV----------------TSGSRVIITTRDKQVLKNCWANKKYRMKELV 290
            L  KKV +V D+V                 +GSR++ITT  K V++    N  Y +  L 
Sbjct: 318  LQGKKVFVVLDNVGDKSQIDKILGGCDWIKAGSRIVITTSSKSVIQGL--NSTYLVPGLS 375

Query: 291  YADAHKLFCQWAFGGDH--LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESA 348
              DA   F   AF         S  +L  + + Y+ G P  LK+L   L  + +  W+  
Sbjct: 376  SCDALNHFNYHAFSASDGFYQPSFTDLAKQFVDYSMGHPSVLKLLARELRSKDESYWKEK 435

Query: 349  MRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF------DASK 402
            +  L   P   I++VL+I YD L +  K VFLDIA F   E+   V  +       DAS+
Sbjct: 436  LSALANSPSNTIQDVLRIPYDELKEQHKIVFLDIAYFFRFENESYVRRLLGSSAHADASE 495

Query: 403  SLINLDLFY------RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
                 D F       R+ M+DLL      +  + S  +     RL  H +I  VL     
Sbjct: 496  ITDLADKFLIDISGDRVEMNDLLYTFAIGLNSQASSENTTSERRLSKHSEIVDVLMNKAE 555

Query: 457  TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG-------DKNKCMVSHLEGVPF 509
               + G+ LDM +V +E+ ++S  F+KM  LR+L+FY        +     ++  EG+ F
Sbjct: 556  ATKVRGVYLDMFEV-KEMGLDSDTFNKMDDLRYLKFYNSHCHRECEAEDSKLNFPEGLEF 614

Query: 510  --AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD----------------- 548
               E+R+L W + P K L  N   + L+ LK+P +++EQ+W++                 
Sbjct: 615  LPQELRYLNWLKYPEKNLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSK 674

Query: 549  -----------------------VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL----- 580
                                   ++ LP  L   ++ +   +  C  LE LPD       
Sbjct: 675  LHSLSGLSRAQKLQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDITLVGLR 734

Query: 581  -----------------ENLEYLTVKGTTIRE------------------------LPES 599
                             +NLE L + GT I+E                        LP+S
Sbjct: 735  TLILSNCSRFKEFKLIAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDS 794

Query: 600  LGRLSWVKRLILSNNSNLERIPE------------------------------------- 622
            +G L  ++ +ILS  S+LE  PE                                     
Sbjct: 795  IGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPELSSVRRLSLSSNEF 854

Query: 623  -----SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM----- 672
                 SI +L  L +L + HC+ L ++P LP NL  L A  C SLE +      +     
Sbjct: 855  RILPRSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLETISILSDPLLAETE 914

Query: 673  ---SSVLYVNLCNFLKLDPNELSEIV--KDGWMKHSLYE-ERGIKKSMY----FPGNEIP 722
               S+ ++ N     K++ N +      K   M ++L   E+G+   +     FPG ++P
Sbjct: 915  HLHSTFIFTNCTKLYKVEENSIESYPRKKIQLMSNALARYEKGLALDVLIGICFPGWQVP 974

Query: 723  KWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYA 782
             WF H+++G    LK   PR      L   A CAVV F  ++              N   
Sbjct: 975  GWFNHRTVG--LELKQNLPRHWNAGGLAGIALCAVVSFKDYIS-----------KNNRLL 1021

Query: 783  VCCDWKRKSEGHL---YSWFLG--------KISYVESDHVFLGCNSF-----GGEYFGPN 826
            V C  + K E      +S  LG        +   ++SDHVF+G  S+       +  G  
Sbjct: 1022 VTCSGEFKKEDKTLFQFSCILGGWTEHGSYEAREIKSDHVFIGYTSWLNFMKSDDSIGCV 1081

Query: 827  YDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADHIL 867
              E S R   +      +    V KCG   +Y+  + DH L
Sbjct: 1082 ATEASLRFQVT-DGTREVTNCTVVKCGFSLIYSHTNVDHSL 1121


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 213/693 (30%), Positives = 338/693 (48%), Gaps = 85/693 (12%)

Query: 73  FYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKR----WKNALTEAADLSGFDSNVIRPES 128
           FY V P  VR Q  ++G  F +      E+ K+    W+ AL +A DLSGF    +R  S
Sbjct: 15  FYHVRPCEVRNQYGTYGEEFKKHESNADEEKKKKIGEWRTALRKAGDLSGFS---LRDRS 71

Query: 129 KLIEEIANDVL-KRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISK 187
           +           +RL   +    + +VG++ ++++++ L+   S  V  + I+G GGI K
Sbjct: 72  EAEFIEEIIGEIRRLIPKWVHVGENIVGMDENLKKVKLLIDAQSNKVSMVGIYGTGGIGK 131

Query: 188 ITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGNM--RNIESQL 244
            TIA  V+N +   F+   F  NVRE  E+ G +  LQK+LL ++  + N+  RNI+   
Sbjct: 132 TTIAKVVYNDMLDQFKCHSFLENVREKYEDKGDLLQLQKELLCDILMEKNLVLRNIDEGF 191

Query: 245 NRLARK----KVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKY 284
            ++  K    KV IV DDV                  GS +I+TTR+K+ L    +   Y
Sbjct: 192 KKIKSKRHSEKVLIVLDDVGCEEQLKFLAPNSECFHPGSIIIVTTRNKRCLDVYDSYSSY 251

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
             K +    A +LFC  AF  DH   + + L+++ + YA G+PLAL VLG +L  R  + 
Sbjct: 252 EAKRMADKQAEELFCWNAFKQDHPIENFVGLSNRILDYADGLPLALVVLGSFLFQRPMDE 311

Query: 345 WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASK-- 402
           WES + +L+ IP   I++VL+ISYD L D +K +FL IACF + E       I ++ K  
Sbjct: 312 WESTLDELKTIPPENIQKVLQISYDGLSDERKKLFLYIACFFKDEDEKMATRILESCKLH 371

Query: 403 SLINLDLFYR----------IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
             I L + +           IRMHDLL++MG  IV  +    PGK +RL   +DI  VL 
Sbjct: 372 PAIGLRVLHERCLISIEDNTIRMHDLLQEMGWAIVCNDP-ERPGKWSRLCELQDIESVLS 430

Query: 453 KNTGTEAIEGISLDMNK-VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE 511
           +N  T+ IEGI    ++   + I + +  F  M +LR L+   ++   +    E +P  +
Sbjct: 431 QNEWTKNIEGIFTSQSRHTGKHIQLTTEVFRNMNQLRLLKVEFNQIVQLSQDFE-LPCHD 489

Query: 512 VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS-SLCTFKTPITFEII 568
           + +  W   PL+ L  N   + LV L + C++++ LW+    +P+  L       +  ++
Sbjct: 490 LVYFHWDYYPLEYLPSNFHTDNLVELNLWCSRIKHLWEG--NMPAKKLKVIDLSYSMHLV 547

Query: 569 DCKMLERLPDELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIP---ESI 624
           D   +  +P    NLE LT+KG T ++ LP +  +L  ++ L     SNLE  P   E +
Sbjct: 548 DISSISSMP----NLETLTLKGCTRLKSLPRNFPKLECLQTLSCCGCSNLESFPKIEEEM 603

Query: 625 RHLSKLTF--------------------LFISHCERLQTLPELPCNLGLLSARN---CTS 661
           R L KL                      L +S C++L +LP+   +L  L   N   C+ 
Sbjct: 604 RSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSR 663

Query: 662 LEKLPA-GLSSMSSVLYVNL--CNFLKLDPNEL 691
           L   P   + S+ ++ Y++L  C  L+  PN +
Sbjct: 664 LVGFPGINIGSLKALKYLDLSWCENLESLPNSI 696



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 39/230 (16%)

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICA---------- 529
           + S MP L  L   G       + L+ +P    R+    +C L+TL+ C           
Sbjct: 551 SISSMPNLETLTLKG------CTRLKSLP----RNFPKLEC-LQTLSCCGCSNLESFPKI 599

Query: 530 -EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            E++ SL+    K+      +  LPSS+         ++  CK L  LPD + +L  L  
Sbjct: 600 EEEMRSLR----KLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQT 655

Query: 589 KG----TTIRELPE-SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
                 + +   P  ++G L  +K L LS   NLE +P SI  LS L  L +  C +L+ 
Sbjct: 656 LNLFACSRLVGFPGINIGSLKALKYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKG 715

Query: 644 LPELPCNLGLLSA------RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            P++  N G L A        C +LE LP  + ++SS+  + + N  KL+
Sbjct: 716 FPDI--NFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLGITNCPKLE 763



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 22/146 (15%)

Query: 521 PLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLER-LPDE 579
           P+ + ++ + +++SL    T VE +  D+  L SSL      +   +  CK  E  +P +
Sbjct: 832 PIGSSHLTSLEILSLGNVPTVVEGILYDIFHL-SSL------VKLSLTKCKPTEEGIPRD 884

Query: 580 LENLEYLT---------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
           ++NL  L          +KGT +    + +  L+ ++ L L  N +   IP  I  LS L
Sbjct: 885 IQNLSPLQQLSLHDCNLMKGTIL----DHICHLTSLEELYLGWN-HFSSIPAGISRLSNL 939

Query: 631 TFLFISHCERLQTLPELPCNLGLLSA 656
             L +SHC++LQ +PELP +L  L A
Sbjct: 940 KALDLSHCKKLQQIPELPSSLRFLDA 965


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1401

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 245/830 (29%), Positives = 385/830 (46%), Gaps = 165/830 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLK-SIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           + VFLSFRG DTR NF   L+  L+ K +++ F D++ + +GD I  SL   IE S  ++
Sbjct: 12  FSVFLSFRGFDTRANFCERLYVALNEKQNVRVFRDNEGMEKGDKIDPSLFEAIEDSAASV 71

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I+ S+ YA+S W                      FY V+PS VRKQS  F + F    K 
Sbjct: 72  IVLSKNYANSAWCLNELALICELRSSLKRPMIPIFYGVNPSDVRKQSGHFEKDFEENAKT 131

Query: 99  FPEK-MKRWKNALTEAADLSGF---------DSNVIRPE--SKLIEEIANDVLKRLDATF 146
           F E+ ++RWK A+    ++ GF         D++ I  +    +IE +   VL  +    
Sbjct: 132 FDEETIQRWKRAMNLVGNIPGFVCTEETVKDDNDGINRDKVDDMIELVVKKVLAEVRNRP 191

Query: 147 QSKNKGLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGS 205
           +      VG+E  +E++  LL   S  GV  L ++G+GGI K T+A + +NKI  +F+  
Sbjct: 192 EKVADYTVGLESCVEDLMKLLDFESTSGVQTLGLYGMGGIGKTTLAKSFYNKIIVNFKHR 251

Query: 206 YFALNVRE-AEETGGIKDLQKKLLSEL-----SKDGNMRNIESQLNRLARKKVRIVFDDV 259
            F  +VRE + +  G+ +LQK L+ EL       +   R +E     +  KK  +V DDV
Sbjct: 252 VFIESVREKSSDQDGLVNLQKTLIKELFGLVPEIEDVSRGLEKIEENVHEKKTIVVLDDV 311

Query: 260 T----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF 303
                             GS ++ITTRD ++L     N++Y +K L    A KLF   + 
Sbjct: 312 DHIDQVNALVGETKWYGEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSL 371

Query: 304 GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEV 363
             +    + +EL+ K ++    +PLA++V G +L  + +  W   + KL      ++  V
Sbjct: 372 RKEKPPKNLLELSTKIVRILGLLPLAVEVFGSHLYDKDENEWPVELEKLTNTQPDKLHCV 431

Query: 364 LKISYDSLDDSQKNVFLDIAC-FLEGE-HRDEVISI-----FDA--------SKSLINLD 408
           L +S++SLDD +K +FLDIAC FL+ E  +DE++ I     F+A         KSL+ + 
Sbjct: 432 LALSFESLDDEEKKIFLDIACLFLKMEITKDELVDILKGCGFNAEAALRVLIQKSLVTIM 491

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
               + MHD +RDMGR++V +E  + P  ++RLW   +I  VL    GT +I GI  D  
Sbjct: 492 KDDTLWMHDQIRDMGRQMVLRECSDDPEMQSRLWDRGEIMNVLDYMKGTSSIRGIVFDFK 551

Query: 469 K-----------VNR-------------------------------EIHMNSYAFSKMPK 486
           K           V+R                               EI +    F  M K
Sbjct: 552 KKFVRDPTADEIVSRNLRNNPGLNFVCNYLRNIFIRFRAEEKPKRSEITIPVEPFVPMKK 611

Query: 487 LRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
           LR L+     N  +  +L+ +P +E++ ++W  CPL+ L  +I A +L  L +  + + +
Sbjct: 612 LRLLQI---NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDILARQLGVLDLSESGIRR 667

Query: 545 LWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPDELEN---LEYLTV-KGTTIRELP 597
               VQ LPS     K     ++I+   C  L+ +PD L N   LE L   +   + ++P
Sbjct: 668 ----VQTLPSK----KVDENLKVINLRGCHSLKAIPD-LSNHKALEKLVFERCNLLVKVP 718

Query: 598 ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPC---- 649
            S+G L  + +L L   S L      +  L  L  LF+S C  L  LPE    +PC    
Sbjct: 719 RSVGNLRKLLQLDLRRCSKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKEL 778

Query: 650 ------------------NLGLLSARNCTSLEKLPAGLSSMSSV--LYVN 679
                              L  LS   C S+++LP+ L  ++S+  LY++
Sbjct: 779 LLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLD 828



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 118/295 (40%), Gaps = 50/295 (16%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+ L +LS + +L L NN     +P S+  LS L  L +  C  L+ LP LPC L  L
Sbjct: 1086 KIPDDLEKLSSLMKLNLGNNY-FHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHL 1144

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--VKDGWM-----KHSLYE 706
            +  NC SLE + + LS ++ +  +NL N  K +D   L  +  +K  +M      +SL  
Sbjct: 1145 NMANCFSLESV-SDLSELTILEDLNLTNCGKVVDIPGLEHLMALKRLYMTGCNSNYSLAV 1203

Query: 707  ERGIKK-----------------SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
            ++ + K                 ++  PGN +P WF         T   +P      NK 
Sbjct: 1204 KKRLSKVIPRTSQNLRASLKMLRNLSLPGNRVPDWFSQ----GPVTFSAQP------NKE 1253

Query: 750  ISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCD-WKRKSEGHLYSWFLGKISYVES 808
            +     AVVV         H+ G+D    NV  V     K       ++  L  +     
Sbjct: 1254 LRGVIIAVVV------ALNHEIGDDYQKPNVVGVQAQILKLDLPLFTHTLHLSGVPRTSD 1307

Query: 809  DHVFLGCNSFGGEYFGPNYDEF--SFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
            D + +   S     F P        + I      PP  +  E+K  GIH VY  D
Sbjct: 1308 DQLHICRYS----AFHPMVTMLKDGYTIQVIKRNPPMEKDVELKMHGIHLVYEGD 1358



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 8/140 (5%)

Query: 537 MPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGT 591
           MPC K E L D   +  LP S+   +      ++ C+ ++ LP    +L +LE L +  T
Sbjct: 772 MPCLK-ELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDT 830

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--SHCERLQTLPELPC 649
            +R LP S+G L  +++L L   ++L +IP++I  L  L  LFI  S  E L  +     
Sbjct: 831 ALRNLPISIGDLKNLQKLHLMRCTSLSKIPDTINKLISLKELFINGSAVEELPLVTGSLL 890

Query: 650 NLGLLSARNCTSLEKLPAGL 669
            L  LSA +C SL+++P+ +
Sbjct: 891 CLKDLSAGDCKSLKQVPSSI 910



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         E+ +CK L+ LP+   +++ L  L ++G+ I +LP+  G+L  
Sbjct: 926  IESLPEEIGDLHFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLEK 985

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L ++N   L+R+PES   L  L  L++        + ELP + G LS      + K 
Sbjct: 986  LVVLRMNNCEKLKRLPESFGDLKSLRHLYMKET----LVSELPESFGNLSKLMVLEMLKK 1041

Query: 666  P 666
            P
Sbjct: 1042 P 1042



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 13/116 (11%)

Query: 569  DCKMLERLPDEL---ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIR 625
            DCK L+++P  +     L  L +  T I  LPE +G L ++++L L N  +L+ +PESI 
Sbjct: 899  DCKSLKQVPSSIGGLNFLLQLQLNSTPIESLPEEIGDLHFIRQLELRNCKSLKALPESIG 958

Query: 626  HLSKLTFLFISHCERLQTLPELPCNLG------LLSARNCTSLEKLPAGLSSMSSV 675
             +  L  L++        + +LP + G      +L   NC  L++LP     + S+
Sbjct: 959  KMDTLHNLYLEG----SNIEKLPKDFGKLEKLVVLRMNNCEKLKRLPESFGDLKSL 1010


>gi|297741885|emb|CBI33320.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 189/575 (32%), Positives = 291/575 (50%), Gaps = 76/575 (13%)

Query: 187 KITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQL 244
           K TIA A++N+ S  ++G  F  N+RE  + G I  LQ++LL  + +  N +  N++  +
Sbjct: 21  KTTIAKAIYNETSDQYDGRSFLRNIRERSK-GDILQLQQELLHGILRGKNFKINNVDEGI 79

Query: 245 NRLAR----KKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKY 284
           + + R     +V ++FDDV                 + S +IITTRDK VL    A+  Y
Sbjct: 80  SMIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITTRDKHVLAQYGADIPY 139

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
            + +L   +A +LF  WAF  +     +  L+   I YA G+PLALKV+G  L G+    
Sbjct: 140 EVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVIGASLFGKKISH 199

Query: 345 WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSL 404
           WESA+ KL+IIPH EI  VL+IS+D LDD  K +FLD+ACF +G+ +D V  I       
Sbjct: 200 WESALCKLKIIPHKEIHNVLRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRILGPHAEH 259

Query: 405 INLDLFYR---------IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           +   L  R         + MHDL++ MG E++R+E    PG+R+RLW   + Y VL  NT
Sbjct: 260 VITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLW-DSNAYHVLIGNT 318

Query: 456 GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMV-SHL-EGVPFA--E 511
           GT AIEG+ LD  K N    + + +F +M +LR L+ +  + K  +  HL     F+  E
Sbjct: 319 GTRAIEGLFLDRCKFNLS-QLTTKSFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYE 377

Query: 512 VRHLEWPQCPLKT--LNICAEKLVSLKMPCTKVEQLWD---------------------- 547
           + +L W + PL++  LN  A+ LV L +  + ++QLW                       
Sbjct: 378 LTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGNKVLLLLFSYNFSSVPNLEIL 437

Query: 548 ------DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPE 598
                 +++RLP  +  +K   T     C  LER P+    +  L  L + GT I +LP 
Sbjct: 438 TLEGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPS 497

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ-TLPELPCNLGLLSAR 657
           S+  L+ ++ L+L   + L +IP  I HLS L  L + HC  ++  +P   C+L  L   
Sbjct: 498 SITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKL 557

Query: 658 NCTS--LEKLPAGLSSMSSVLYVNL--CNFLKLDP 688
           N        +P  ++ +S +  +NL  C+ L+  P
Sbjct: 558 NLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 592


>gi|13509238|emb|CAC35339.1| Nho-C protein [Linum usitatissimum]
          Length = 1120

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 233/807 (28%), Positives = 379/807 (46%), Gaps = 122/807 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y++FLSFRG D R  F  HL+  L     +TF D++ L +G  I  SL+  I  S I I 
Sbjct: 31  YEIFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGTIGPSLIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  IMTQNYASSKWCLQELAKMVDCWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +  +K  PE +  WK AL E   + G+          +I++I  +V   L A +      
Sbjct: 151 QHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEVELHLGANYTLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      +  SR +ITTRD + L+     K + ++E+    +  LF + AFG +  
Sbjct: 331 FDEVLGKLNNFSMDSRFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGAEFP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+++ ++ A G+PL +KV+G  L    K  WE  + + + I   +++E LKISY
Sbjct: 391 PEDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINL-------D 408
             L  ++K +FLDIAC+  G ++ E + ++                +SLI L       D
Sbjct: 451 TELTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
                +MH+ +RD+GR IVR+E+  +P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 DINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +    K+ +LR+L      N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKELEKLTRLRYLSV---SNARLAGDFKDV-LPNLRWLRLHSCDSVPTGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---------- 578
             KLV L++    V   W     L   +      +T E   C  L+++PD          
Sbjct: 625 LNKLVDLELVDCSVRDGWKGWNEL--KVAHKLKAVTLE--RCFHLKKVPDFSDCGDLEFL 680

Query: 579 ---------------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                            ++L +L +  T I ++   +GRL  +K LI S NS+L+ +P  
Sbjct: 681 NFDGCRNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLLNLKYLIAS-NSSLKEVPAG 739

Query: 624 IRHLSKLTFLFISHCE--RLQTLPELPCNLGLL-----SARNC--TSLEKLPAGLSSMSS 674
           I  LS L +L ++  +  +L     LP +L +L     + ++C  TSLE L   L ++S+
Sbjct: 740 ISKLSSLKWLSLTLTDPYKLDFTEMLPASLTILLISNDTQKSCPDTSLENLQR-LPNLSN 798

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMK 701
           +  +NL     +D   + EI+  G +K
Sbjct: 799 L--INLSVLFLMDVG-IGEILGLGELK 822


>gi|13509223|emb|CAC35331.1| N2-A protein [Linum usitatissimum]
          Length = 1075

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 219/757 (28%), Positives = 357/757 (47%), Gaps = 117/757 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L    I+TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRQTFADHLYTSLVRSKIRTFRDEEGLQKGETIGPSLIQAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           FY +DP  VR   S  +   F 
Sbjct: 91  ILTQNYASSKWCLQELAKMVNCWKNGGEAKGQHIIIPVFYFMDPRDVRHPDSGPYKESFE 150

Query: 94  RLR-KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +   K  PE +  WK AL E   + G+  + +  +  ++++I  +V   L A +      
Sbjct: 151 QHNLKHDPETILEWKGALQEVGKMKGWHISELTGQGAVVDKIFTEVELHLRANYTLATDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           LVG++ S++E+  LL + S     + I+G+G + K T+A AV+NK+S  FE   F  N+R
Sbjct: 211 LVGIDFSVDEMVKLLNLDSTSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCCFLDNIR 270

Query: 213 EAE-ETGGIKDLQKKLLSE-LSKD-----GNMRNIESQLNRLARKKVRIVFDDV------ 259
           E   +  G+  LQ K++S+ L KD          ++    R++R K+ +V DDV      
Sbjct: 271 ETLLKNDGVVALQNKVISDILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRF 330

Query: 260 ----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                     ++ SR ++TTRD + L+     K ++ + + +  + KLF + AFG D+  
Sbjct: 331 DDIFGKLTAFSADSRFLVTTRDARTLERLRGCKLFKHEGMSHDHSLKLFSKHAFGVDYPP 390

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             +  L ++ ++   G+PLALKV+G  L    K  W+  + +L+ IP V ++  LKISY+
Sbjct: 391 EDYASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNVQYRLKISYN 450

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L D++K +FLD+AC   G  ++  I ++                +SL+ ++      MH
Sbjct: 451 ELTDNEKQIFLDVACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMH 510

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           D +RD+GR IV +ES N   KR+R+W + D   +LK   G + +E + +DM        +
Sbjct: 511 DHIRDLGRAIVCEESQNLY-KRSRIWSNNDAIDILKNREGNDCVEALRVDMR--GEGFAL 567

Query: 477 NSYAFSKMPKLRFLRFY-GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSL 535
            +  F +  +LRFL    GD +    + L  + +  V H +   CP   LN+   KL+ L
Sbjct: 568 TNEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWLRVYHGD--PCP-SGLNL--NKLMIL 622

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE 595
           ++  + V   W+    + ++           ++ CK LE++PD            +T R 
Sbjct: 623 ELEVSDVTDSWEGWNEIKAA----GKLKVVHLMCCKGLEKVPDL-----------STCRG 667

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI---------SHCERLQTLPE 646
           L   L R S  +R+    +  L+     IR+   L  L I            E LQ L +
Sbjct: 668 L--ELLRFSICRRM----HGELD-----IRNFKDLKVLDIFQTRITALKGEVESLQNLQQ 716

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF 683
           L            + L ++PAG+S +SS+ Y+NL N 
Sbjct: 717 LDV--------GSSGLIEVPAGISKLSSLEYLNLTNI 745


>gi|297840113|ref|XP_002887938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333779|gb|EFH64197.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 965

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 222/731 (30%), Positives = 364/731 (49%), Gaps = 79/731 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL        I  F D  + RG  IS  L   I  S I+I++
Sbjct: 12  YRVFTSFHGPDVRKTFLSHLRKQFICNGITMFDDQGIERGQTISPELTRGIRESRISIVV 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY V PSHVRKQ+  FG   S     + 
Sbjct: 72  LSKNYASSSWCLDELLEILKCKEDIGQIVMTIFYGVYPSHVRKQTGEFGIRLSETCDGKT 131

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E+ +RW  AL +  +++G        ESK++E+IA DV  +L+ T     + +VG+E  
Sbjct: 132 EEERRRWSQALNDVGNIAGEHFLNWDKESKMVEKIARDVSNKLNTTISKDFEDMVGIEAH 191

Query: 160 IEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
           +++++SLL + +E G   + I G  GI K TIA A+ +++S  F+ + F  N++ +    
Sbjct: 192 LQKMQSLLHLDNEDGAIIVGICGPSGIGKTTIARALHSRLSSSFQLTCFMENLKGSSNSG 251

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
            +E G    LQ++LLS++    ++R  ++ +   RL  +KV I+  DV            
Sbjct: 252 LDEYGLKLCLQQQLLSKILNQNDLRIFHLGAIPERLCDQKVLIILADVDDLQQLEALANE 311

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+TT D+++L+    N  Y +      +A K+FC+ AF          +L
Sbjct: 312 TSWFGPGSRIIVTTEDQELLEQHDINNTYHVDFPTTKEARKIFCRSAFRQSSAPYGFEKL 371

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
            ++ IK    +PL L+V+G  L  + ++ WES + +LE     +IE VL++ YD+L  + 
Sbjct: 372 VERVIKLCSNLPLGLRVMGSSLRRKKEDDWESILHRLENSLDRKIEGVLRVGYDNLHKND 431

Query: 376 KNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDLLRDM 422
           + +FL IA F   +  D V ++   S             KSLI + +   I MH LL+ +
Sbjct: 432 QFLFLLIAFFFNNQDNDHVKAMLGGSNLDVRYGLKTLTYKSLIQISIKGEIMMHKLLQQV 491

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS 482
           G+E V+++     GKR  L    +I  VL+ ++G+  + GIS D++ +  ++++++ AF 
Sbjct: 492 GKEAVQRQD---NGKRQILIDTDEICDVLENDSGSRNVMGISFDISTLLNDVYISAEAFK 548

Query: 483 KMPKLRFLRFYGDKNKCMVS-HL-EGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
           ++  L+FL  Y  +    V  HL E + F  ++R L W   P K L      E LV L +
Sbjct: 549 RIRNLQFLSIYKTRFDTNVRLHLSEDMVFPPQLRLLHWEVYPGKCLPHTFRPEYLVELNL 608

Query: 538 PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTV-KGTTIR 594
              ++E+LW+ +Q     L   K     E++    L+ LPD  +  NLE L + +  ++ 
Sbjct: 609 RDNQLEKLWEGIQ----PLTNLK---KMELLRSCHLKELPDLSDATNLEVLNLARCESLV 661

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           E+P S G L  +++LI+     L+ +P    +L+ L  L +  C +L+ +P++  N+  L
Sbjct: 662 EIPPSFGNLHKLEKLIMDFCRKLKVVPTHF-NLASLESLGMMGCWQLKKIPDISTNITTL 720

Query: 655 SARNCTSLEKL 665
           S  + T LE L
Sbjct: 721 SMTD-TMLEDL 730


>gi|105922992|gb|ABF81449.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 806

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 182/537 (33%), Positives = 267/537 (49%), Gaps = 121/537 (22%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAII 60
           + VFLSFRGEDTR  FT HL+  L    I TF DD  I RG NI   +   I+ S I+II
Sbjct: 19  HQVFLSFRGEDTRRKFTDHLYTALVQAGIHTFRDDDEIQRGHNIELEIQKAIQQSKISII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YA SRW                      FY VDPS VR Q+ SF   F    KRF
Sbjct: 79  VFSIDYARSRWCLDELVMIMERKRTTNSIVLPVFYDVDPSQVRNQTGSFAAAFVEHEKRF 138

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
            E+M+R   W+ AL E ADL G                                      
Sbjct: 139 KEEMERVNGWRIALKEVADLGGM------------------------------------- 161

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-AE 215
                    +L  GS       ++GIGG+ K  IA  V+N+    FEG  F  N RE ++
Sbjct: 162 ---------VLGDGSHSAAIALLYGIGGVGKTAIAKNVYNQNFYKFEGKSFLSNFRERSK 212

Query: 216 ETGGIKDLQKKLLSELSKDG--NMRNIESQLNRLAR----KKVRIVFDDVTS-------- 261
           E  G+  LQ++LLS++ K     + +++  + ++      ++  IV DDV          
Sbjct: 213 EFKGLVCLQRQLLSDILKKSVDEINDVDEGILKIKDVICCRRTLIVLDDVEERDQFNAIV 272

Query: 262 --------GSRVIITTRDKQVLKNCWANKKY---RMKELVYADAHKLFCQWAFGGDHLDA 310
                   GS++I+TTR+K +L    AN K+   +++ L    + +LF   AFG  +   
Sbjct: 273 GMQNWLCKGSKIIVTTRNKGLLS---ANDKWVKCKVEPLDNGKSLELFSWHAFGQAYPVE 329

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +E + K + +  G+PLAL+V+G  L G+S+EVWESA+ ++E+IP+ E++++L+ISYDS
Sbjct: 330 GFVEDSWKIVNHCNGLPLALRVIGSSLSGKSREVWESALHEMEVIPNCEVQKILRISYDS 389

Query: 371 LDDS-QKNVFLDIACFLEGEHRDEVISIFDASK----------------SLINLDLFYRI 413
           LDD  QKN+FLDIACF  G   +  + I D                    ++ ++   R+
Sbjct: 390 LDDEYQKNLFLDIACFFNGMDYNYAVRILDGLGIGARFRIDNLIDRCLVEIVEINSDKRL 449

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV 470
            MH L+RDMGREI R+ES     +  R+WHH + + VLK+ +  E + G+++DM+ +
Sbjct: 450 WMHQLVRDMGREISRQES----PQCQRIWHHMEAFTVLKEASDAEKLRGLTIDMHAL 502


>gi|224113819|ref|XP_002332483.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832734|gb|EEE71211.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 504

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 190/516 (36%), Positives = 270/516 (52%), Gaps = 77/516 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR NFT HL+  L    I TF DD  IR G++I   L   I+ S I+II
Sbjct: 1   YQVFLSFRGEDTRRNFTDHLYKALVDAGIHTFRDDDEIRRGESIDFELQMAIQQSKISII 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FS  YASSRW                      FY VDPS V +Q+ SF   F    K F
Sbjct: 61  VFSIDYASSRWCLDELVMIMERKRNDDCIVLPVFYDVDPSQVGRQTGSFAATFVEHEKSF 120

Query: 100 PEKMKR---WKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLKRLDATFQSKNKGLV 154
            E M+R   W+ AL E ADL+G    V+    E++ ++ I   V K+LD          +
Sbjct: 121 NEDMERVNRWRIALKEVADLAGM---VLGDGYEAQFVQSIVEKVSKKLDQKMFHLPLHFI 177

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G +  +  I S L  GS       ++GIGG+ K  IA +VFN+    FEG  F  N R  
Sbjct: 178 GRDPLVNYINSWLQEGSHDAAIAILYGIGGVGKTIIAKSVFNQNIHKFEGKSFLSNFRSK 237

Query: 215 EETGGIKDLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDVTS------- 261
           +    I  LQ++LLS+ L K  +  N E +      + L  +K  IV DDV         
Sbjct: 238 D----IVCLQRQLLSDILKKTIDEINDEDEGILKIKDALCCRKTLIVLDDVDKRDQFNKI 293

Query: 262 ---------GSRVIITTRDKQVLK-NCWANKKYRMKELVYADAHKLFCQWAFG-GDHLDA 310
                    GS++I+TTR+K +   N     +++++ L    + +LF   AFG  D +D 
Sbjct: 294 IGMQNWLCKGSKIIVTTRNKGLFSANDIERVEFKVEPLDNEKSLELFSWNAFGQADPVDG 353

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             +E + + + +  G+PLAL+V+G  L G+ +E+WESA++++E+I + E+++VL+ISYD 
Sbjct: 354 -FVEDSWRIVHHCNGLPLALRVIGSLLSGKGREIWESALQQMEVILNFEVQKVLRISYDF 412

Query: 371 LD-DSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMH 416
           LD D  KN+FLDIACF  G   D+ + I D               + L+ ++   R+ MH
Sbjct: 413 LDGDYPKNLFLDIACFFNGMDVDDAVRILDGLDKGARFGIDNLIDRCLVEINNDQRLWMH 472

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
            L+RDMGREI R+ES     K  R+W H+D + VLK
Sbjct: 473 QLVRDMGREIARQEST----KCQRIWRHEDAFTVLK 504


>gi|147841230|emb|CAN68969.1| hypothetical protein VITISV_043153 [Vitis vinifera]
          Length = 1074

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 215/688 (31%), Positives = 329/688 (47%), Gaps = 149/688 (21%)

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +VG++  +EE++SLL +  + V  + I+GIGGI K TIA  V+N I   F G+ F   V+
Sbjct: 1   MVGMDVHLEELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVK 60

Query: 213 EAEETGGIK-DLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTS---- 261
              +    +  L ++LL  + + G+++  +I   +N    RL  KKV +VF DV      
Sbjct: 61  NRSQCNNDRLQLLQELLHGIMEGGHLKLESIYDGMNMIKGRLGSKKVLVVFYDVDDSDKV 120

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+IITTRDKQ+L     +  Y  K L   +A +LF   AF   ++ 
Sbjct: 121 QRLVRSYEWFGPGSRIIITTRDKQLLDEYGVHASYEAKVLEDKEAIELFSWHAFKVQNIR 180

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             +++++++ + YA+G+PLAL+VLG  L  ++K+ W+SA+ KL+  P+ +I ++LKIS D
Sbjct: 181 EDYVDMSNRLVDYAKGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDMLKISLD 240

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLL 419
            LDDSQ  VFLDIACFL+GE +D ++ I D            + LI +    R++MHDL+
Sbjct: 241 GLDDSQVEVFLDIACFLKGEAKDCILRILDDHAEYDIRVLRDRCLITISA-TRVQMHDLI 299

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           + MG  I+R++   HP KR RLW   DI++ L    G E +E IS D+++ +++I +N  
Sbjct: 300 QQMGWSIIREK---HPSKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSR-SKDIQVNKK 355

Query: 480 AFSKMPKLRFLRFY-GDKNKCMVSHLE-------GVPFAEVRHLEWPQCPLKTL--NICA 529
            +  M KLRFL+ Y GD +  M    +         P  E+R+L W   PL+TL  N   
Sbjct: 356 VYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDXEFPSQELRYLYWEAYPLQTLPSNFNG 415

Query: 530 EKLVSLKMPCTKVEQLW------------------------------------------- 546
           E LV L M  + ++QLW                                           
Sbjct: 416 ENLVELHMRNSTIKQLWKGRKVLGKLKIIDLSDSRLLTKMPNYQACRILRSSTSPFVKGQ 475

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRELPESLGRL 603
             ++ +PSS+          +  C+  ++  D   NL    ++  K   I+ELP S G L
Sbjct: 476 SGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNSFGYL 535

Query: 604 SWVKRLILSNNSNLERIPE---------------SIRHLSK-------LTFLFISHCERL 641
              + L L + SNLE  PE               +I+ L         L FL++S C   
Sbjct: 536 ESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNAFGCLEALQFLYLSGCSNF 595

Query: 642 QTLP-------------------ELPCNLGLLSA------RNCTSLEKLPAGLSSMSS-- 674
           +  P                   ELPC++G L+        NC +L  LP  +  + S  
Sbjct: 596 EEFPEIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLE 655

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKH 702
           VL +N C+ L   P    EI++D  MKH
Sbjct: 656 VLNINGCSNLVAFP----EIMED--MKH 677



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 29/230 (12%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTIRE--LPESL 600
           +++  LP+S+       +  + +C  L  LPD L +L+     L + G  + +  +P  L
Sbjct: 710 ENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDL 769

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             LS ++ L +S  S +  IP +I  LS L  L ++HC+ L+ +PELP  L +L A  C 
Sbjct: 770 WCLSSLRFLDVSE-SPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCP 828

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN- 719
            +      LS+ SS L+ +L N  K         +   +M    +  + +      PG+ 
Sbjct: 829 HV----GTLSTPSSPLWSSLLNLFKSRTQYCECEIDSNYMIWYFHVPKVV-----IPGSG 879

Query: 720 EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRH 769
            IP+W  HQSMG  A ++    R    N            F  F  +FRH
Sbjct: 880 GIPEWISHQSMGRQAIIELPKNRYEDNN------------FLGFAVFFRH 917



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRLS 604
           +++ LP+S+C  K+     I  C  L   P+ +E++++L    +  T I ELP S+  L 
Sbjct: 640 NLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLK 699

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
            ++RL+L+N  NL  +P SI +L+ L  L + +C +L  LP+    L C L  L    C 
Sbjct: 700 GLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCN 759

Query: 661 SLE-KLPAGLSSMSSVLYVNL 680
            ++  +P+ L  +SS+ ++++
Sbjct: 760 LMKGAIPSDLWCLSSLRFLDV 780


>gi|224145341|ref|XP_002325608.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862483|gb|EEE99989.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1083

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 221/701 (31%), Positives = 330/701 (47%), Gaps = 185/701 (26%)

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNK--ISRHFEGSYFAL 209
           GL G++  + ++ESLL + S  V  + IWG+GGI K TIA AV +   I   F+  ++A 
Sbjct: 9   GLFGIDVRVSKVESLLNMESPDVLIVGIWGMGGIGKTTIAKAVRDNMYIRSRFDRIFYA- 67

Query: 210 NVREAEETGGIKDLQKKLLSELSKDGNMRNIESQ----LNRLARKKVRIVFDDVTS---- 261
           N R+        DL++K L +L     + ++  +      RL+R K+ IV DDV +    
Sbjct: 68  NFRQK------SDLRRKFLKQLLGQETLGSLSFRDSFVRERLSRIKILIVLDDVHNLMHL 121

Query: 262 ----------------GSRVIITTRDKQVLKNCW-ANKKYRMKELVYADAHKLFCQWAFG 304
                           GS+V+IT+RDKQVL N    NK Y++KEL Y +A +LF   A  
Sbjct: 122 EEWRDLLDGRNNSFGPGSKVLITSRDKQVLNNVVDENKTYKVKELNYEEAIQLFRSNALK 181

Query: 305 GDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
                   + + ++  ++ QG PLALKVLG    G+S EVW SA+ KL+   +  I++VL
Sbjct: 182 NCIPTIDQMHMIEQIPRHVQGNPLALKVLGSSFYGKSMEVWRSALNKLD--QNRNIKDVL 239

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--SKSLIN---------------- 406
           +ISYD LD  Q+++FLDIA F    + DE   I D    +S+I+                
Sbjct: 240 RISYDGLDSEQQSIFLDIAHFFINWNPDEATRILDCLHGRSVISDITTLIDNCLITNVDS 299

Query: 407 ------LDLFY----------------------RIRMHDLLRDMGREIVRKESINHPGKR 438
                 LD  Y                       + MHDLLR+M   IVR ES   PGKR
Sbjct: 300 SCDEWQLDCLYGRSVNFDIYTLLDQCLVNTSHISLEMHDLLREMAFNIVRAES-RFPGKR 358

Query: 439 NRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG---- 494
           +RL H  D+ QVL++N GTE IEGISLDM+K++R+IH+ S AF+ M  LRFL FYG    
Sbjct: 359 SRLCHPPDVVQVLEENKGTEEIEGISLDMSKLSRQIHLKSDAFAMMDGLRFLNFYGRPYS 418

Query: 495 --DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQ 550
             DK       L+ +P  ++R+L W   P K+L +   AE LV L +  +K+ +LW  V+
Sbjct: 419 QDDKMHLPPPGLKYLP-NKLRYLRWDGFPSKSLPLAFRAEHLVELHLRESKLVKLWTGVK 477

Query: 551 -----------------RLPSSLCTFKTPITFEIIDCKMLERLPDELE---NLEYLTVK- 589
                             LP  L   K  ++  + DC  L  +P  L+    LEY+ ++ 
Sbjct: 478 DVGNLRTIDLSKSSYLTELP-DLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRC 536

Query: 590 ------------------------------------------GTTIRELPESL-GRLS-- 604
                                                     GT+I+E+P+S+ G+L   
Sbjct: 537 CYNLRSFPMLYSKVLRKLSIDQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITGKLKVL 596

Query: 605 --W--------------VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
             W              ++ L LS  + ++ +P SI+ L++L  L ++ C +L++LPE+ 
Sbjct: 597 DLWGCSKMTKFPEVSGDIEELWLSETA-IQEVPSSIQFLTRLRELEMNGCSKLESLPEIT 655

Query: 649 CNLG---------LLSARNCTSLEKLPAGLSSMSSVLYVNL 680
             +          +L    C+ LE LP     M S++ +NL
Sbjct: 656 VPMESLDLSQDSVILDMSGCSKLESLPQITVPMESLVELNL 696



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 30/335 (8%)

Query: 458  EAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEW 517
            E++  I++ M  +  E++++     ++P + F      K    +  L+G P  E+     
Sbjct: 679  ESLPQITVPMESL-VELNLSKTGIKEIPSISFKHMTSLK----ILKLDGTPLKELPSSIQ 733

Query: 518  PQCPLKTLNICA-EKLVSLKMPCTKVEQLWD------DVQRLPSSLCTFKTPITFEIIDC 570
                L++L++    KL S       +E L +       ++ LPSS+       + ++  C
Sbjct: 734  FLTRLQSLDMSGCSKLESFPQITVPMESLAELNLNGTPLKELPSSIQFLTRLQSLDMSGC 793

Query: 571  KMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
              LE  P+    +E+L  L +  T I+ELP S+  +  +K+L L   + ++ +P SI+ +
Sbjct: 794  SKLESFPEITVPMESLAELNLSKTGIKELPLSIKDMVCLKKLTL-EGTPIKELPLSIKDM 852

Query: 628  SKLTFLFISHCERLQTLP-ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKL 686
              L  L + H   ++ LP +LP +L  L  R+C+SLE +P+ ++     L  +  N  K+
Sbjct: 853  VCLEELTL-HGTPIKALPDQLPPSLRYLRTRDCSSLETVPSIINIGRLQLRWDFTNCFKV 911

Query: 687  DPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
            D   L E +             GI+  M  PG+EIP+WF  + +GSS T++     P+  
Sbjct: 912  DQKPLIEAMHLKIQSGEEIPRGGIE--MVIPGSEIPEWFGDKGVGSSLTIQL----PSNR 965

Query: 747  NKLISFAFCAVVVFPAFLK------YFRHKSGEDD 775
            ++L   AFC V + P   +      + ++K+GE D
Sbjct: 966  HQLKGIAFCLVFLLPPPSQDLYCDYHVKYKNGEHD 1000



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 83/155 (53%), Gaps = 8/155 (5%)

Query: 539 CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRE 595
           C+K+E L  ++     SL   +  +  ++  C  LE LP     +E+L  L +  T I+E
Sbjct: 645 CSKLESL-PEITVPMESLDLSQDSVILDMSGCSKLESLPQITVPMESLVELNLSKTGIKE 703

Query: 596 LPE-SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
           +P  S   ++ +K L L + + L+ +P SI+ L++L  L +S C +L++ P++   +  L
Sbjct: 704 IPSISFKHMTSLKILKL-DGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPQITVPMESL 762

Query: 655 SARNC--TSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
           +  N   T L++LP+ +  ++ +  +++    KL+
Sbjct: 763 AELNLNGTPLKELPSSIQFLTRLQSLDMSGCSKLE 797



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 23/192 (11%)

Query: 512 VRHLEWPQC-PLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDC 570
           +R L   QC  L T    ++ + SL++  T ++++       P S+ T K  +  ++  C
Sbjct: 551 LRKLSIDQCLDLTTCPTISQNMKSLRLWGTSIKEV-------PQSI-TGKLKV-LDLWGC 601

Query: 571 KMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
             + + P+   ++E L +  T I+E+P S+  L+ ++ L ++  S LE +PE    +  L
Sbjct: 602 SKMTKFPEVSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPMESL 661

Query: 631 ------TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNF- 683
                   L +S C +L++LP++   +  L   N +       G+  + S+ + ++ +  
Sbjct: 662 DLSQDSVILDMSGCSKLESLPQITVPMESLVELNLSK-----TGIKEIPSISFKHMTSLK 716

Query: 684 -LKLDPNELSEI 694
            LKLD   L E+
Sbjct: 717 ILKLDGTPLKEL 728


>gi|297850156|ref|XP_002892959.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338801|gb|EFH69218.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 963

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 211/684 (30%), Positives = 323/684 (47%), Gaps = 90/684 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR    SHL+  L  + I TF DDQ +  GD+IS  L   + +S  A++
Sbjct: 12  YDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELRRALGSSSFAVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE YA+SRW                      FY VDPS VR Q  SF       + + 
Sbjct: 72  VLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRHQLGSFALE----KYQG 127

Query: 100 PE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
           PE   K+ RW+ AL   A+LSG  S+    E+ ++ EIA D+ +R+    +  +  +VG+
Sbjct: 128 PEMADKVLRWREALNLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLLHKIDSGNIVGM 187

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +E +   L + S  V  + IWG+GGI K +IA  +++++S  F    F  N++   +
Sbjct: 188 KAHMEGLNHRLDLESNEVLMVGIWGMGGIGKTSIAKCLYDQLSPKFPAHCFTENIKSVSK 247

Query: 217 TGG--IKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDVTS-------- 261
             G  +K LQK++L   L  D  + ++E+       RL  ++V +V D V          
Sbjct: 248 DIGHDLKHLQKEMLCNILCDDIRLWSVEAGCQEIKKRLGNQRVFLVLDGVDKVSQVHALA 307

Query: 262 --------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GSR+IITTRD  +L  C     Y +K L   DA  +F Q AF G     S  
Sbjct: 308 KDKNWFGPGSRIIITTRDMGLLNTCGVEIVYEVKCLDDKDALHMFKQIAFEGGLPPDSFE 367

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSK--EVWESAMRKLEIIPHVEIEEVLKISYDSL 371
           +L+ +A + A G+P A++    +L GR+   + WE A+  LE      I E+LKISY+ L
Sbjct: 368 QLSIRASRLAHGLPSAIQAYALFLRGRTATPDGWEEALSALESSLDENIMEILKISYEGL 427

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDL 418
               +NVFL + C   G+    + S+               A KS I +     + MH L
Sbjct: 428 PKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSFIKISTNGSVIMHKL 487

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           +  MGREI+R    N    R  L    +I   L    G E  E + L   ++   + M +
Sbjct: 488 VEQMGREIIRD---NMSLARKFLRDPMEIPDALAFRDGGEQTECMCLHTCELTCVLSMEA 544

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE-----VRHLEWPQCPLKTLNICAEK-- 531
               +M  L+FL+ Y   +    S L+ +P  +     +R   W   PL+ L   ++   
Sbjct: 545 SVVGRMHNLKFLKVYKHVDY-RESKLQLIPDQQFLPRSLRLFHWDAFPLRALPSGSDPCF 603

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVK 589
           LV L +  + +E L           C  K+    ++   K L++LPD   + +LE L ++
Sbjct: 604 LVELNLRHSDLETL---------RTCMLKSLKRLDVTGSKYLKQLPDLSSITSLEELLLE 654

Query: 590 GTT-IRELPESLGRLSWVKRLILS 612
             T +  +PE +G+ S +K+L LS
Sbjct: 655 QCTRLDGIPECIGKRSTLKKLKLS 678



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL 600
           K++   +D + LP ++ +     T  + +C  LE LP +L  ++ LT+    +RE    L
Sbjct: 809 KLDLSGNDFENLPEAMNSLSRLKTLWLRNCFKLEELP-KLTQVQTLTLTNFKMREDTVYL 867

Query: 601 GRLSWVKRLI-------LSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
                  R++       + ++ + E +P SIR L+ L  L +++C++L+++  +P +L  
Sbjct: 868 SFALKTARVLNHCQISLVMSSHDFETLPPSIRDLTSLVTLCLNNCKKLKSVERIPTSLQF 927

Query: 654 LSARNCTSLE 663
           L A  C SLE
Sbjct: 928 LDAHGCDSLE 937


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 214/706 (30%), Positives = 330/706 (46%), Gaps = 121/706 (17%)

Query: 102 KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE 161
           K++ W++ALTEAA++ G        ES  + EI  D+ +RL+      +  LVG++  + 
Sbjct: 4   KVRSWRSALTEAANIGGEHVEKNGYESGHVNEIVKDIFRRLNCRMLDVDDNLVGMDSHVN 63

Query: 162 EIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           EI   LC+     V  + I GIGG+ K TIA  V+N+ S  FE   F  NVRE   T G 
Sbjct: 64  EIIRRLCVDQLNDVRIIGICGIGGMGKTTIAKVVYNRFSHEFEYMSFLENVREVGNTMGS 123

Query: 221 KDLQKKLLSEL---SKDGNMRNIESQLNRLAR----KKVRIVFDDVT------------- 260
             LQ + L +L    ++ N+ N+    N +      K+V IV DD+              
Sbjct: 124 HHLQNQFLCDLLQVERNQNVSNVGQGANTIKNVLRCKRVFIVLDDIDHSNQLEYLLRNRD 183

Query: 261 ---SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTD 317
               GSRVIITTR+K +L+    +  Y ++EL    A +LF  +AF  +      I+L+D
Sbjct: 184 WLGRGSRVIITTRNKHLLQE--TDDVYEVEELNSKQARELFSLFAFRQNLPKQDFIDLSD 241

Query: 318 KAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKN 377
           + + Y  G+PLALKVLG +L  ++   WES + KLE    V I +VLK+SYD LD +Q+ 
Sbjct: 242 RVVNYCHGLPLALKVLGSFLFNKAIPQWESELSKLERELEVGISDVLKVSYDGLDYTQQE 301

Query: 378 VFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGR 424
           +FLDIAC  +G+ +D V  I D               K LI+L    +I MHDL++ MG 
Sbjct: 302 IFLDIACCFKGKDKDFVSRILDGCNFYAERGIRALCDKCLISLS-ENKILMHDLIQQMGW 360

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
            I+R E +  P K  RLW   DI +  +   G + +E I LD+++ +  + +++  F+KM
Sbjct: 361 NIIRSEYLGDPTKWRRLWDPSDICRAFRMG-GMKNVEAIFLDLSR-STPLEVSTKIFAKM 418

Query: 485 PKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVS 534
            KLR L+ Y          + K ++      P  E+R+L W   P K+L  N     L+ 
Sbjct: 419 KKLRLLKIYSSGYYGTMEKQLKVILPEDFQFPAHELRYLHWEGYPFKSLPSNFLGVNLIE 478

Query: 535 LKMPCTKVEQLWDDVQRLPS---------------------------------------S 555
           L M  + ++QL    +RL                                         S
Sbjct: 479 LNMKDSNIKQLMQRNERLEQLKFLNLSGSRQLTETSFSNMPNLETLILADCTSLNVVDPS 538

Query: 556 LCTFKTPITFEIIDCKMLERLP------DELENLEYLT---------------------- 587
           +   K      ++ C+ L  LP      D LE +  +T                      
Sbjct: 539 IGDLKKLTVLNLLGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLL 598

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
           + G  I+ELP S+  L+ +KRL LS   NL  +P SI  L  L  L +  C  L T PE+
Sbjct: 599 LDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCSNLDTFPEI 658

Query: 648 PCNLGLLSARNCTS--LEKLPAGLSSMSSVLYVNLCNFLKLDPNEL 691
             ++  L + +  S  +++LP+ + ++ S+L +++ N L   P+ +
Sbjct: 659 MEDMKCLESLDIRSSGIKELPSSIQNLKSLLRLDMSNCLVTLPDSI 704



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 139/353 (39%), Gaps = 75/353 (21%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRE------------- 595
           ++ LPSS+   K+ +  ++ +C  L  LPD + NL  +T++G +  E             
Sbjct: 675 IKELPSSIQNLKSLLRLDMSNC--LVTLPDSIYNLRSVTLRGCSNLEKFPKNPEGFYSIV 732

Query: 596 -------------LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
                        +P  +  L+ ++ L LS N ++  IP  I  L KL FL ISHCE LQ
Sbjct: 733 QLDFSHCNLMEGSIPTEIWDLNSLEILNLSWN-HMVSIPSGISQLCKLDFLDISHCEMLQ 791

Query: 643 TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
            +PELP +L  + A  CT LE L +  S + S                        W   
Sbjct: 792 DIPELPSSLRKIDALYCTKLEMLSSPSSLLWS--------------------SLLKWFNP 831

Query: 703 SLYEERGIK--KSMYFPGN-EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAV-- 757
           +  E    K  K +   GN  IP W  HQ +GS   ++  P      +  + FAF  +  
Sbjct: 832 TSNEHLNCKEGKMIIILGNGGIPGWVLHQEIGSQVRIEP-PLNWYEDDHFLGFAFFTLYR 890

Query: 758 ----VVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE-SDHVF 812
                  P+  ++     G+ D       V  D    ++  +++W      Y + SD ++
Sbjct: 891 DYAHCTIPS--RFSLRLRGDPD------EVVGDCNDHNDSRIWNWCECNRCYDDASDGLW 942

Query: 813 LGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADH 865
           +         +  N     +     +HF   ++   +K+CG+  +Y  D   H
Sbjct: 943 V-------TLYPKNAIPNKYHRKQPWHFLAAVDATNIKRCGVQLIYTHDYLHH 988


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 209/589 (35%), Positives = 303/589 (51%), Gaps = 63/589 (10%)

Query: 152 GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           GL G++  + E+ESLL + S  V  + IWG+GGI K TIA  V +K+   FEG +FA N 
Sbjct: 9   GLFGIDVRVSEVESLLDMESPDVLIVGIWGMGGIGKTTIAQVVCSKVRSRFEGIFFA-NF 67

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMRNIESQL-NRLARKKVRIVFDDVTS--------- 261
           R+  +       +      L+  G++   ++ + NRL R KV IV DDV           
Sbjct: 68  RQQSDLLRRFLKRLLGQETLNTIGSLSFRDTFVRNRLRRIKVFIVLDDVDDLMRLEEWRD 127

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GS+V+IT+RDKQVLKN   ++ Y ++ L   DA +LF   A        
Sbjct: 128 LLDGRNSSFGPGSKVLITSRDKQVLKNV-VDETYEVEGLNDEDAIQLFSSKALKNYIPTI 186

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            H  L  +  ++ QG PLALKVLG  L G+S E W SA+ KL   P  +IE  L+ISYD 
Sbjct: 187 DHRHLISQIARHVQGNPLALKVLGSSLYGKSIEEWRSALYKLTQDP--QIERALRISYDG 244

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA--SKSLINLDLFYRI------------RMH 416
           LD  QK++FLDIA F  G   DE   I D    +S+I +D+   I              H
Sbjct: 245 LDSEQKSIFLDIAHFFIGWEPDEATRILDGLYGRSVI-IDISTLIDKCLITTSHNSLETH 303

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           DLLR M   IVR ES + PG+R+RL H  D+ QVL++N GT+ I+GISL+M+   R I +
Sbjct: 304 DLLRQMAINIVRAES-DFPGERSRLCHRPDVVQVLEENKGTQKIKGISLEMSVFPRHILL 362

Query: 477 NSYAFSKMPKLRFLRFY------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
            S AF+ M  LRFL  Y       DK     + LE +P  E+R+L W   P K+L  +  
Sbjct: 363 KSDAFAMMDGLRFLNIYISRHSQEDKMHLPPTGLEYIP-NELRYLRWYGFPSKSLPPSFR 421

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPS--SLCTFKTPITFEIIDCKMLERLPDELENLEYL 586
           A  LV L +  +K+ +LW  V+ + +   +    +P   E+ D  M        +NLE L
Sbjct: 422 AVHLVELHLRKSKLVKLWTGVKDVGNLRKIDLSYSPYLTELPDLSM-------AKNLECL 474

Query: 587 TVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            +K   ++ E+P SL  L  ++ + LS+ +NL   P  +     L+FL IS C  + T P
Sbjct: 475 RLKDCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFP--MLDSKVLSFLSISRCLYVTTCP 532

Query: 646 ELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            +  NL  L     TS++++P  ++    +L ++ C+ +   P  L +I
Sbjct: 533 MISQNLVWLRLEQ-TSIKEVPQSVTGNLQLLNLDGCSKMTKFPENLEDI 580



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 51/279 (18%)

Query: 570 CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           C  + + P+ LE++E L ++GT I+E+P S+  L+ ++ L +S  S LE  PE   H+  
Sbjct: 567 CSKMTKFPENLEDIEELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLESFPEITVHMKS 626

Query: 630 LTFLFISHC-----------------------ERLQTLPELPCNLGLLSARNCTSLEKLP 666
           L  L +S                           ++ LPELP +L  L+  +C SLE + 
Sbjct: 627 LEHLILSKTGIKEIPLISFKHMISLISLDLDGTPIKALPELPPSLRYLNTHDCASLETVT 686

Query: 667 AGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFR 726
           + ++     L ++  N  KLD   L   +           +  I+  M  PG+EIP+WF 
Sbjct: 687 STINIGRLRLGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGSIQ--MVLPGSEIPEWFG 744

Query: 727 HQSMGSSATLKTRPPRPAG-YNKLISFAFCAVVVFPA-----------FLKYFRHKSGED 774
            + +GSS T++     P+  + +L   AFC V + P            F  + + ++GE+
Sbjct: 745 DKGIGSSLTIQL----PSNCHQQLKGIAFCLVFLAPLPSHGFSFSDVYFDCHVKSENGEN 800

Query: 775 DWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFL 813
           D D  V          S+  L S +L      +SDH+ L
Sbjct: 801 DGDDEVVLA-------SQKSLLSHYL---RTCDSDHMIL 829


>gi|13509217|emb|CAC35328.1| N1-B protein [Linum usitatissimum]
          Length = 1108

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 234/812 (28%), Positives = 384/812 (47%), Gaps = 135/812 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L    I+TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRQTFADHLYAWLVRSKIRTFRDEEGLQKGETIGSSLIQAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           FY +DP  VR   S  +   F 
Sbjct: 91  ILTQNYASSKWCLQELAKMVDCWKNGGGGKGQHIILPVFYFMDPRDVRHPDSGPYKEAFE 150

Query: 94  RLR-KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +   K  PE +  WK AL +   + G+  N +  +  ++++I   +   L A +      
Sbjct: 151 QHNMKHDPETILEWKEALQDVGKMKGWHINELTGQGAVVDKIFTTIEFHLRANYTLATDE 210

Query: 153 LVGVECSIEEIESLLCIG---SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFAL 209
           LVG++ S+EE+  L+ +    SE +  + I+G+GG+ K T+A AVFN++S  FE   F  
Sbjct: 211 LVGIDSSVEEVMELMNLDHSTSERI--IGIYGMGGLGKTTLAKAVFNQVSMQFERCCFLD 268

Query: 210 NVREAE-ETGGIKDLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDV--- 259
           N+RE      G+  LQ K++S+ L KD +     S        R+ R K+ +V DD+   
Sbjct: 269 NIRETLLRNDGVVALQNKVISDILRKDSDQAKNASDGVRIIRERVRRHKIFVVLDDIDES 328

Query: 260 -------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGD 306
                        ++ SR +ITTRD + L+     K + ++E+ +  + +LF + AFG D
Sbjct: 329 FHFDEIFGKLGDFSTDSRFLITTRDARTLELLNECKMFGLEEMSHDHSLQLFSKHAFGVD 388

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKI 366
           +    +  L ++ I+ A G+PLALKV+G  L    K  WE  + +L+ IP  +++E LK+
Sbjct: 389 YPPEDYASLCEEFIQVASGLPLALKVIGSLLFKSDKRFWEDKLIELKAIPSAKVQERLKV 448

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVI------SIFDAS-------KSLINLDLFYRI 413
           SY+ L  ++K +FLDIAC   G  ++  +       ++ AS       +SL+ +D     
Sbjct: 449 SYNELTHNEKQIFLDIACLFVGAKKEVPMYMWSDCDLYPASTLRTLVQRSLVRMDDNKIF 508

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNK---- 469
            MHD +RD+GR IVR+E+  +P KR+R+W + D   +LK   G + +E + +DM      
Sbjct: 509 WMHDHIRDLGRTIVREENSQNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDMKGEGYA 568

Query: 470 -VNREIH--------------MNSYAFSKMPKLRFLRFY-GDK-------NKCMVSHLEG 506
             N+E +              ++    + +P LR+LR Y GD        NK ++  L+G
Sbjct: 569 LTNKEFNQFSRLRFLEVLNGDLSGNFKNILPNLRWLRVYRGDPSPSGLNLNKLVILELDG 628

Query: 507 VPFAEVRHLEWPQC----PLKTLNICA----EKLVSLKMPCTKVEQL------WDDVQRL 552
             +       W +      LK +N+ +    EK+  L   C  +E L      W    R 
Sbjct: 629 C-YVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLS-TCRGLELLCFHKCQW---MRG 683

Query: 553 PSSLCTFKTPITFEI--IDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
              + TFK     +I   +   ++   + L+NL+ L V  + + E+P  + +LS ++ L 
Sbjct: 684 ELDIGTFKDLKVLDINQTEITTIKGEVESLQNLQQLDVGRSGLIEVPAGISKLSSLEFLD 743

Query: 611 LSN--NSNLERIPESIRHL-----------SKLTFLFISHCERLQTLPELP--CNLGLLS 655
           L++  +  +E +P  ++ L           S L  L I     LQ LP L    NL  L 
Sbjct: 744 LTSVKHDEVEMLPNGLKLLVISSFSLSALPSSLIKLDICDSRNLQRLPNLASVTNLTRLH 803

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLD 687
            +    + ++P GL  +  +  +++CN   LD
Sbjct: 804 LKE-VGIHEIP-GLGKLKLLESLSICNAPNLD 833


>gi|321530322|gb|ADW94528.1| putative truncated TIR-NBS-LRR protein [Pinus monticola]
          Length = 815

 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 237/803 (29%), Positives = 371/803 (46%), Gaps = 152/803 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVF+S  G+D +  F SHL++ L    ++ F+D Q +R G++    + G I+ + + I 
Sbjct: 19  YDVFISHSGKDVKKTFASHLYYRLVSFGLRVFLDYQELRKGEDFPCEIKGAIKNASVHIA 78

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHS---FGRHFSRLRKRFP 100
           +FS  YA+S+W                  FY V+P+ +R+ SH    + R  S L K+  
Sbjct: 79  VFSPTYAASQWCLDELVLMLETRAPIIPVFYHVEPTELRR-SHGDGVYARSLSNLEKKRK 137

Query: 101 E---------KMKRWKNALTEAADLSGF----DSNVIRPESKLIEEIANDVLKRLDATFQ 147
                      ++ W+NAL++ AD SGF    D      E KL++++   VLK+      
Sbjct: 138 HDNEPRYDSGTIENWRNALSQVADKSGFVLDLDLGFGGDEGKLLDQLVEVVLKKGKKKLD 197

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGS 205
              +   G+   +++ E+ L +   G  V  + I G+GG  K T+A  +FN+ S  +  S
Sbjct: 198 VA-RYPTGLGDLVKDFETKLSLQQHGERVQFVGITGLGGAGKTTLAKELFNRKSSEYSKS 256

Query: 206 YFALNVREAEETGGIKDLQKKLLSELS--------KDGNMRNIESQLNRLARKKVRIVFD 257
            F  +VRE E    I  LQ+KLL  LS        KDG +  +    + L+   V +V D
Sbjct: 257 CFLFDVRE-EAKKSITSLQRKLLKGLSASKEEIDSKDGGIEILRRHFSVLS-APVLLVLD 314

Query: 258 DVT--------------------SGSRVIITTRDKQVLKNCWANKK--YRMKELVYADAH 295
           DV                       S ++IT+RDK VL      +   Y+M  L    + 
Sbjct: 315 DVDHHDQVHALLPVTDKGILTLRPSSLILITSRDKNVLTRSGVQETSIYKMTGLSRERSR 374

Query: 296 KLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEI 354
           +LFC  AF   H  +    L D+ ++   G+PL+LKV G  LC  + K  W+  M+KL  
Sbjct: 375 ELFCSHAFCHPHPLSGFEPLVDQFLEACSGLPLSLKVFGGLLCRNTDKSYWKKQMKKLRK 434

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------S 401
             H +I++ L++SYD+LD  ++ +FLDIACF  G+ RD  I +++A             S
Sbjct: 435 TLHKDIQKSLQVSYDALDKEEQQIFLDIACFFIGKSRDTAIRVWNASRWSGSLVFESLLS 494

Query: 402 KSLINLDL------------FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWH-HKDIY 448
           K L+ +D+             Y IRMHD LRDMGR++      N  G   RLW   K I 
Sbjct: 495 KCLVEMDIGETDESGRPSHNIYVIRMHDHLRDMGRDLA-----NTSGFPCRLWRGTKQIE 549

Query: 449 QVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFS----------------KMPKLRFLR- 491
            +L+    +EAI+   + M++  +       A+S                KM  L  L  
Sbjct: 550 DLLQ--LPSEAIKVRGIRMSQWEQYYEDGKLAYSDDESGYSDERPSFSRYKMKNLELLEI 607

Query: 492 -FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSLKMPCTKVEQLWDD 548
               D  KC+   LE V    +    W  CP  +L   I  E L  L++  +++++LW +
Sbjct: 608 DIGEDHLKCL---LEAVDSPNLLWFCWEDCPCSSLPSYIPMENLRVLEVEGSELKKLWQE 664

Query: 549 VQRLPSSLCTFKT-----PITFEIIDCKMLERL--------------PDE---LENLEYL 586
             ++P  L    T      I   I   K LER+              P E   L +L++L
Sbjct: 665 DVQVPLKLRELLTDAPLSKIPKSIGQLKHLERMVVVSWFWSSSIVDIPKEFCYLRSLKHL 724

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            ++ T +  LP+S G LS ++ + L   S LER+P+S  +LS+L  + +S C +L+ LP+
Sbjct: 725 VLRLTNLSSLPDSFGNLSRLEHINLYCCSQLERLPDSFGNLSRLEHIKLSRCSQLERLPD 784

Query: 647 LPCNLGLL---SARNCTSLEKLP 666
              NL  L      +C +L++LP
Sbjct: 785 SFGNLSRLEYIDMSSCWALKRLP 807


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 216/637 (33%), Positives = 329/637 (51%), Gaps = 68/637 (10%)

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLR 178
           F + + R ES+ I+ IA  +  +L  T  + +K LVG++  +E +   +         + 
Sbjct: 2   FCTLLCRNESESIKIIAEYISYKLSVTLPTISKKLVGIDSRVEVLNGYIGEEVGKAIFIG 61

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKD--- 234
           I G+GGI K T+A  ++++I   FEGS F  NVRE   E  G + LQ++LLSE+  +   
Sbjct: 62  ICGMGGIGKTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERAS 121

Query: 235 --GNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLK 276
              + R IE    RL  KK+ ++ DDV                  GSR+IIT+RD  V+ 
Sbjct: 122 VWDSYRGIEMIKRRLRLKKILLILDDVDDKKQLEFLAEEPGWFGPGSRIIITSRDTNVIT 181

Query: 277 NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCY 336
                K Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLAL+V+G +
Sbjct: 182 GNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSF 241

Query: 337 LCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVIS 396
           L GRS   W  A+ ++  IP  +I +VL+IS+D L +S K +FLDIACFL+G  +D +I 
Sbjct: 242 LYGRSIPEWRGAINRMNEIPDCKIIDVLRISFDGLHESDKKIFLDIACFLKGFKKDRIIR 301

Query: 397 IFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWH 443
           I D+              KSLI++    ++ MH+LL+ MG+EIVR ES   PG+R+RLW 
Sbjct: 302 ILDSCGFHAHIGTQVLIEKSLISVSR-DQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWT 360

Query: 444 HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSH 503
           ++D+   L  NTG E IE I LDM  + +E   N  AFSKM +LR L+     N   +S 
Sbjct: 361 YEDVCLALMDNTGKEKIEAIFLDMPGI-KESQWNIEAFSKMSRLRLLKI----NNVQLSE 415

Query: 504 LEGVPFAEVRHLEWPQCPLKTLNIC--AEKLVSLKMPCTKVEQLWDDVQ--------RLP 553
                  +++ LEW   P K+L +    ++LV L M  + +EQLW   +         L 
Sbjct: 416 GPEDLSNKLQFLEWHSYPSKSLPVGLQVDQLVELHMANSNLEQLWYGCKSAVNLKIINLS 475

Query: 554 SSLCTFKTPITFEIID--------CKMLERLPDEL---ENLEYLT-VKGTTIRELPESLG 601
           +SL   KTP    I +        C  L  +   L   + L+Y+  V   +IR LP +L 
Sbjct: 476 NSLYLTKTPDLTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNL- 534

Query: 602 RLSWVKRLILSNNSNLERIPESIRHLSKLTFLFI--SHCERLQTLPELPCNLGLLSARNC 659
            +  +K  IL   S LE+ P+ + ++  L  L +  +   +L +       LGLLS  +C
Sbjct: 535 EMGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSC 594

Query: 660 TSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
            +LE +P+ +  + S+  ++L  C+ LK  P +L E+
Sbjct: 595 KNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEV 631



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 65/310 (20%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLS 604
           +++ +PSS+   K+    ++  C  L+ +P+   E+E+LE   V GT+IR+LP S+  L 
Sbjct: 596 NLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSGTSIRQLPASIFLLK 655

Query: 605 WVKRLILSN-----------------------------------------------NSNL 617
            +K L L                                                  +N 
Sbjct: 656 NLKVLSLDGFKRIVMPPSLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNF 715

Query: 618 ERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
             +P+SI  L +L  L +  C  L++LP++P  +  +    C SL+ +P  ++  SS   
Sbjct: 716 VSLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQTVCLNGCISLKTIPDPINLSSS--- 772

Query: 678 VNLCNFLKLDPNELSEIVKDGWMKHSLYEE--RGIKK-----SMYFPGNEIPKWFRHQSM 730
             +  F+ L+  EL        M  +L E   +G+        +  PGNEIP WF HQS 
Sbjct: 773 -KISEFVCLNCWELYNHYGQDSMGLTLLERYFQGLSNPRPGFGIAIPGNEIPGWFNHQSK 831

Query: 731 GSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRK 790
           GSS +++  P    G+   ++F        P+   +F+  +G +++  +   + C+  + 
Sbjct: 832 GSSISVQV-PSWSMGFVACVAFGVNGES--PSLFCHFK-ANGRENYPSSPMCISCNSIQV 887

Query: 791 SEGHLYSWFL 800
              H++ ++L
Sbjct: 888 LSDHIWLFYL 897


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 215/694 (30%), Positives = 329/694 (47%), Gaps = 155/694 (22%)

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           +VG++  +EE++SLL +  + V  + I+GIGGI K TIA  V+N I   F G+ F   V+
Sbjct: 1   MVGMDVHLEELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVK 60

Query: 213 EAEETGGIK-DLQKKLLSELSKDGNMR--NIESQLN----RLARKKVRIVFDDVTS---- 261
              +    +  L ++LL  + + G+++  +I   +N    RL  KKV +VF DV      
Sbjct: 61  NRSQCNNDRLQLLQELLHGIMEGGHLKLESIYDGMNMIKGRLGSKKVLVVFYDVDDSDKV 120

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLD 309
                       GSR+IITTRDKQ+L     +  Y  K L   +A +LF   AF   ++ 
Sbjct: 121 QRLVRSYEWFGPGSRIIITTRDKQLLDEYGVHASYEAKVLEDKEAIELFSWHAFKVQNIR 180

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
             +++++++ + YA+G+PLAL+VLG  L  ++K+ W+SA+ KL+  P+ +I ++LKIS D
Sbjct: 181 EDYVDMSNRLVDYAKGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDMLKISLD 240

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD----------ASKSLINLDLFYRIRMHDLL 419
            LDDSQ  VFLDIACFL+GE +D ++ I D            + LI +    R++MHDL+
Sbjct: 241 GLDDSQVEVFLDIACFLKGEAKDCILRILDDHAEYDIRVLRDRCLITISA-TRVQMHDLI 299

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
           + MG  I+R++   HP KR RLW   DI++ L    G E +E IS D+++ +++I +N  
Sbjct: 300 QQMGWSIIREK---HPSKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSR-SKDIQVNKK 355

Query: 480 AFSKMPKLRFLRFY-GDKNKCMVSHLE-------GVPFAEVRHLEWPQCPLKTL--NICA 529
            +  M KLRFL+ Y GD +  M    +         P  E+R+L W   PL+TL  N   
Sbjct: 356 VYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDCEFPSQELRYLYWEAYPLQTLPSNFNG 415

Query: 530 EKLVSLKMPCTKVEQLW------------------------------------------- 546
           E LV L M  + ++QLW                                           
Sbjct: 416 ENLVELHMRNSTIKQLWKGRKIAHQNAKLSSMPNLEELYLAFCERLKKFPEIRGNMGSLR 475

Query: 547 ------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENL---EYLTVKGTTIRELP 597
                   ++ +PSS+          +  C+  ++  D   NL    ++  K   I+ELP
Sbjct: 476 ILYLGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELP 535

Query: 598 ESLGRLSWVKRLILSNNSNLERIPE---------------SIRHLSK-------LTFLFI 635
            S G L   + L L + SNLE  PE               +I+ L         L FL++
Sbjct: 536 NSFGYLESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNAFGCLEALQFLYL 595

Query: 636 SHCERLQTLP-------------------ELPCNLGLLSA------RNCTSLEKLPAGLS 670
           S C   +  P                   ELPC++G L+        NC +L  LP  + 
Sbjct: 596 SGCSNFEEFPEIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSIC 655

Query: 671 SMSS--VLYVNLCNFLKLDPNELSEIVKDGWMKH 702
            + S  VL +N C+ L   P    EI++D  MKH
Sbjct: 656 GLKSLEVLNINGCSNLVAFP----EIMED--MKH 683



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 29/230 (12%)

Query: 547 DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLE----YLTVKGTTIRE--LPESL 600
           +++  LP+S+       +  + +C  L  LPD L +L+     L + G  + +  +P  L
Sbjct: 716 ENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDL 775

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCT 660
             LS ++ L +S  S +  IP +I  LS L  L ++HC+ L+ +PELP  L +L A  C 
Sbjct: 776 WCLSSLRFLDVSE-SPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCP 834

Query: 661 SLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGN- 719
            +      LS+ SS L+ +L N  K         +   +M    +  + +      PG+ 
Sbjct: 835 HV----GTLSTPSSPLWSSLLNLFKSRTQYCECEIDSNYMIWYFHVPKVV-----IPGSG 885

Query: 720 EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRH 769
            IP+W  HQSMG  A ++    R    N            F  F  +FRH
Sbjct: 886 GIPEWISHQSMGRQAIIELPKNRYEDNN------------FLGFAVFFRH 923



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 548 DVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRLS 604
           +++ LP+S+C  K+     I  C  L   P+ +E++++L    +  T I ELP S+  L 
Sbjct: 646 NLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLK 705

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPCNLGLLSARNCT 660
            ++RL+L+N  NL  +P SI +L+ L  L + +C +L  LP+    L C L  L    C 
Sbjct: 706 GLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCN 765

Query: 661 SLE-KLPAGLSSMSSVLYVNL 680
            ++  +P+ L  +SS+ ++++
Sbjct: 766 LMKGAIPSDLWCLSSLRFLDV 786


>gi|240255955|ref|NP_193427.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658425|gb|AEE83825.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 237/793 (29%), Positives = 363/793 (45%), Gaps = 138/793 (17%)

Query: 34  IDDQLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW---------------------- 71
           +D  ++R   I+  L+  I  + I+I+IFSE YASS W                      
Sbjct: 1   MDHGIVRSCIIADELITAIREARISIVIFSENYASSTWCLNELVEIHKCHKDKDLDQMVI 60

Query: 72  -FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMK-RWKNALTEAADLSGFDSNVIRPESK 129
             FY VDPSHVRKQ   FG  F +  +  PE  K RW  ALT+ ++L+G D      E+ 
Sbjct: 61  PVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWVKALTDISNLAGEDLRNGPSEAA 120

Query: 130 LIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKI 188
           ++ +IANDV  +L          LVG+E  IE I+  LC+ S E    + IWG  GI K 
Sbjct: 121 MVVKIANDVSNKL-FPLPKGFGDLVGIEDHIEAIKLKLCLESKEARIMVGIWGQSGIGKS 179

Query: 189 TIAGAVFNKISRHFEG-SYFALNVREAEETGGIK-DLQKKLLSEL--SKDGNMRNIESQL 244
           TI  A+F+++S  F   ++         +  G+K   +K+LLSE+   KD  + +     
Sbjct: 180 TIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVE 239

Query: 245 NRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKE 288
            RL  KKV I+ DDV                 SGSR+I+ T+D+Q+LK    +  Y +K 
Sbjct: 240 QRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDLIYEVKL 299

Query: 289 LVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESA 348
                A K+ CQ+AFG         EL  +  K A  +PL L VLG  L  RSKE W   
Sbjct: 300 PSQGLALKMICQYAFGKYSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKRRSKEEWMEM 359

Query: 349 MRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD--------- 399
           + +L+   + +I + L++SY  LD   +++F  IA    G    +V SI D         
Sbjct: 360 LAELQNGLNRDIMKTLRVSYVRLDPKDQDIFHYIAWLFNGW---KVKSIKDFLGDGVNVN 416

Query: 400 ------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
                   KSLI L     I MH+LL+ +  EI R+ES  +PGKR  L + ++I  V   
Sbjct: 417 IRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEIDREESNGNPGKRRFLENAEEILDVFTD 476

Query: 454 NTGTEAIEGISLDM---NKVNRE-IHMNSYAFSKMPKLRFLR----FYGDKNKCMVSHLE 505
           NTGTE + GI       +++++  I ++  +F  M  L+FL     ++    +  +    
Sbjct: 477 NTGTEKLLGIDFSTSSDSQIDKPFISIDENSFQGMLNLQFLNIHDHYWWQPRETRLRLPN 536

Query: 506 GVPFA--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------- 554
           G+ +   +++ L W  CPLK L  N  AE LV L+M  + +E+LW+  Q L S       
Sbjct: 537 GLVYLPRKLKWLRWENCPLKRLPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLR 596

Query: 555 ---------SLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLT-VKGTTIRELPE---- 598
                     L         ++ +C++LE  P  L  E+L++L  +    +R  PE    
Sbjct: 597 NSNNLKEIPDLSLATNLEELDLCNCEVLESFPSPLNSESLKFLNLLLCPRLRNFPEIIMQ 656

Query: 599 -----------------------------------SLGRLSWVKRLILSNNSNLERIPES 623
                                              S  R   +K L +  N+ LE++ E 
Sbjct: 657 SFIFTDEIEIEVADCLWNKNLPGLDYLDCLRRCNPSKFRPEHLKNLTVRGNNMLEKLWEG 716

Query: 624 IRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL- 680
           ++ L KL  + +S CE +  +P+L    NL +L   NC SL  LP+ + ++  +  +N+ 
Sbjct: 717 VQSLGKLKRVDLSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNME 776

Query: 681 -CNFLKLDPNELS 692
            C  LK+ P +++
Sbjct: 777 ECTGLKVLPMDIN 789


>gi|13509219|emb|CAC35329.1| N1-C protein [Linum usitatissimum]
          Length = 1120

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 235/811 (28%), Positives = 381/811 (46%), Gaps = 122/811 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y++FLSFRG D R  F  HL+  L     +TF D++ L +G  I  S++  I  S I I 
Sbjct: 31  YEIFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGAIGPSIIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I +  YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  RLRKRF-PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           + R++  PE +  WK AL E   + G+          +I++I  +V   L A +      
Sbjct: 151 QHRQKHDPETVLEWKEALQEVGKMKGYHVTESDGHGSIIDKILTEVELHLGANYTLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSLVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      ++ SR +ITTRD + L+     K + ++E+    +  LF + AF  D  
Sbjct: 331 FDDVLGKLNNFSTNSRFLITTRDARGLELLQEYKMFELQEMSPDHSLTLFNKHAFDVDCP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+ + ++ A G+PL +KV+G  L    K  WE  + + + I   +++E LKISY
Sbjct: 391 PKDYAILSKEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINL-------D 408
           + L  ++K +FLDIAC+  G  + E I +++               +SLI L       D
Sbjct: 451 NELTYNEKQIFLDIACYFIGSVKIEPILMWNDCDLYPESTIRSLTQRSLIKLQRSEMKGD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
                +MHD +RD+GR IVR+E+   P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 DVNTFQMHDHVRDLGRAIVREENNQKPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +    K+ +LR+L      N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKELEKLTRLRYLSV---SNARLAGDFKDV-LPNLRWLRLHSCDSVPTGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
             KLV L++    V   W     L   +      +T E   C  L+++PD  +  +LE+L
Sbjct: 625 LNKLVDLELVDCSVRDGWKGWNEL--KVAHKLKAVTLE--RCFHLKKVPDFSDCGDLEFL 680

Query: 587 TVKG-----------------------TTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
              G                       T I ++   +GRL  +K LI+ ++S+L+ +P  
Sbjct: 681 NFDGCRNMRGEVDIGNFKSLRFFQIADTKITKIKGEIGRLLNLKYLIV-DDSSLKEVPAG 739

Query: 624 IRHLSKLTFLFISHCE--RLQTLPELPCNLGLL-----SARNC--TSLEKLPAGLSSMSS 674
           I  LS L +L ++  +  +L     LP +L +L     + ++C  TSLE L   L ++S+
Sbjct: 740 ISKLSSLKWLSLTLTDPYKLDFTEMLPASLRILLISNDTQKSCPDTSLENLQR-LPNLSN 798

Query: 675 VLYVNLCNFLKLDPNELSEIVKDGWMKHSLY 705
           +  +NL     +D   + EI+  G +K   Y
Sbjct: 799 L--INLSVLFLMDVG-IGEILGLGELKMLEY 826


>gi|113205444|gb|AAW28561.2| TMV resistance protein N, putative [Solanum demissum]
          Length = 645

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 209/657 (31%), Positives = 317/657 (48%), Gaps = 145/657 (22%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRGEDTR  FT HL+  L  + I TF DD+ L  GD+I + LL  IE S +A+I
Sbjct: 19  YVVFLSFRGEDTRKTFTGHLYEGLKNRGISTFQDDKRLEHGDSIPKELLRAIEESQVALI 78

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YA+S+W                       FY VDPSHVR QS SFG  F+    +
Sbjct: 79  VFSKNYATSKWCLNELVKIMECKDEENGQTVIPIFYDVDPSHVRNQSESFGAAFAEHELK 138

Query: 99  FP------EKMKRWKNALTEAADLSGFDSNVIRP--ESKLIEEIANDVLK--RLDATFQS 148
           +       +K++RW+NALT AA+L G+D   IR   ES+ I++I + +    R +A   S
Sbjct: 139 YKDDVEGMQKVQRWRNALTVAANLKGYD---IRDGIESEHIQQIVDCISSKFRTNAYSLS 195

Query: 149 KNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
             + +VG+   +E+++S L +    V  L IWGIGG+                       
Sbjct: 196 FLQDVVGINDHLEKLKSKLQMEINDVRILGIWGIGGV----------------------- 232

Query: 209 LNVREAEETGGIKDLQKKLLSEL--SKDGNMRN-------IESQLNRLARKKVRIVFDDV 259
            +V+E  +   I  LQ  LLS+L   KD  + N       I S L  +   KV IV DD+
Sbjct: 233 -DVKENAKKNEIYSLQNTLLSKLLRKKDDYVNNKFDGKCMIPSILCSM---KVLIVLDDI 288

Query: 260 T-------------------------------------------SGSRVIITTRDKQVLK 276
                                                       +GSRVI+TTR+K +++
Sbjct: 289 DHNSKLLVHISHQKVPPVNTPPKSVFFQSSEHLEYLAGDVDWFGNGSRVIVTTRNKHLIE 348

Query: 277 NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCY 336
               +  Y +  L   +A +LF + AF  +  D S  + + + + +A+G+PLALKV G  
Sbjct: 349 K--DDAIYEVSTLPDHEAMQLFNKHAFKKEDPDESFKKFSLEVVNHAKGLPLALKVWGSL 406

Query: 337 LCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVIS 396
           L  +   +W   + +++   + EI E LKISYD L+  ++ +FLDIACF  G+ R EV+ 
Sbjct: 407 LHKKCLTLWRITVEQIKKNSNSEIVEKLKISYDGLEPEEQEIFLDIACFFRGKERKEVMQ 466

Query: 397 IFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWH 443
           I ++             +KSL+ +  + RI MHDL+ DMGR +V+ + +  P KR+R+W 
Sbjct: 467 ILESCDFGAEYGLNVLINKSLVFISEYDRIEMHDLIEDMGRYVVKMQKL--PKKRSRIWD 524

Query: 444 HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFL------RFYGDKN 497
            +D+ +V+   TGT  +E I        +E   N  A  KM  LR L      +F+  + 
Sbjct: 525 VEDVKKVMIDYTGTMTVEAIWFSY--YGKERCFNIEAMEKMKSLRILQVDGLIKFFASRP 582

Query: 498 KCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQ 550
                H + + +    +R L W     K+L  N   EKLV L++  +++  LW + +
Sbjct: 583 SSN-HHDDSIEYLSNNLRWLVWNDYSWKSLPENFKPEKLVHLELRWSRLHYLWKETE 638


>gi|297842029|ref|XP_002888896.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334737|gb|EFH65155.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1169

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 226/698 (32%), Positives = 337/698 (48%), Gaps = 91/698 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSI-KTFIDDQLIR-GDNISQSLLGTIEASCIAI 59
           YDVFLSFRGEDTR    SHLH     + I K F DDQ +  GD+IS+ +   I  S  AI
Sbjct: 10  YDVFLSFRGEDTRKGIVSHLHRAFLARGIDKIFKDDQTLEIGDSISEEIKEAIHNSKFAI 69

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRH------- 91
           ++ S  YASS W                      FY VDPS VR Q  +F          
Sbjct: 70  LVISMNYASSTWCLDELQMIMELHKEKQLTAVPIFYNVDPSDVRHQRGTFALERYECSRV 129

Query: 92  ---FSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS 148
              FS  ++    K+++W+ AL E A  SG D +  + E+ ++ +I   + K++ +    
Sbjct: 130 MLLFSSKKRAMAAKIQKWREALREVAGTSGKDLSTCKDEATMVADIVGQISKQVFSMEPL 189

Query: 149 KNKGLVGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYF 207
               +VG++  +E +  LL I SE  V  + IWG+GGI K TIA  ++ K SR F    F
Sbjct: 190 DFSDIVGMKVHMERLNPLLSIESEDEVRMIGIWGMGGIGKTTIAKCLYEKYSRRFAHYCF 249

Query: 208 ALNVREAEETGGIKDLQKKLLSEL--SKDGNMRNIE---SQLNRLARKKVRIVFDDVTS- 261
             NVR A +  G+  LQKKLLS +   K   +  +E   S +    + K+ +V DDV + 
Sbjct: 250 IENVRIAAK-NGLPYLQKKLLSNIRGKKQETLWCVEKGCSCIKSKLKDKIFLVLDDVDNV 308

Query: 262 ---------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GG 305
                          GSR+IITTRD  +L +      Y +  L   DA ++F Q AF GG
Sbjct: 309 DQLHALAKNTGWFGPGSRIIITTRDFGLLYSFGVRLLYHVSFLDIGDAIQVFKQVAFEGG 368

Query: 306 DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEIIPHVEIEEVL 364
                 + + + +A + AQG+P AL+  G YL   +  E WE A+  LE +PH  I ++L
Sbjct: 369 QAPSDVYQQFSIRASRLAQGLPSALEAFGTYLRRITWIEGWEKALGILETVPHQSIMDIL 428

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD---------ASKSLINLDLFYRIRM 415
           K SYD LD+ ++  FL +AC   G     V ++ D          +KSLI +     I M
Sbjct: 429 KTSYDGLDEQEQAAFLHVACLFNGTSVQRVNALIDDGDIRTKALEAKSLIEISPDGCITM 488

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           H L+    REIVR+ES + P ++  LW    I  VL+ NTGT   EG++L M ++ + + 
Sbjct: 489 HVLIEQAAREIVRQESGSMPWRQRILWKTDPIIFVLQNNTGTTTTEGVALHMCEMLQALS 548

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE-----VRHLEWPQCPLKTL--NIC 528
           +     + +  L+F + +   N    S L+ +P  +     ++ L W   P+ TL     
Sbjct: 549 IEGNVLNAINNLKFFKAFMHLND-KESKLKFLPGTDMLPNTLKLLHWDSYPMTTLPPGYY 607

Query: 529 AEKLVSLKMPCTKVEQLWD---DVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENL 583
              LV L +  + +  LWD   D+ +L             ++   K L  +PD      L
Sbjct: 608 PHCLVELNLRYSSLVHLWDGTLDLGQLKR----------LDVTGSKNLTEIPDLSRAALL 657

Query: 584 EYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERI 620
           + L +KG T +++ PES+G LS +++L LSN   L  +
Sbjct: 658 KDLIMKGCTRLKQTPESIGSLSCLRKLDLSNCDGLTNL 695



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 48/310 (15%)

Query: 505  EGVPFAEVRHLEWP-QCPLKTLNICAEKL---VSLKMPCTKVEQLWDDVQRLPSSLCTFK 560
            +GVPF  +    +P    L  +N+  +K+   + L     K++   +D + LP+S     
Sbjct: 795  DGVPFRCISFSAFPCLVELNLINLNIQKIPVDIGLMQSLEKLDLSGNDFRSLPASTKNLS 854

Query: 561  TPITFEIIDCKMLERLPDELENLEYLTVKGTT----IRELP------------------- 597
                  + +C  L+  P EL  L+ L + G +    + ELP                   
Sbjct: 855  KLKYARLSNCIKLKTFP-ELTELQTLKLSGCSNLESLLELPCAVQDEGRFRLLELELDNC 913

Query: 598  -------ESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN 650
                   E L R + +  L LS++ + + IPESI+ LS L  + +++C++L+++ ELP +
Sbjct: 914  KNLQALSEQLSRFTNLIHLDLSSH-DFDAIPESIKELSSLETMCLNNCKKLKSVEELPQS 972

Query: 651  LGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEIVKDGWMKHSLYEER 708
            L  L A  C SLE +   LS   S+ +++L  C  L+ D   ++  + D         + 
Sbjct: 973  LKHLYAHGCDSLENV--SLSRNHSIKHLDLSHCFGLQQDEQLITLFLNDKC------SQE 1024

Query: 709  GIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNK--LISFAFCAVVVFPAFLKY 766
              ++ +  PGNE+P+ F +QS G+S  +    P   G+    LIS      + FPAF   
Sbjct: 1025 VSQRFLCLPGNEVPRNFDNQSHGTSTKISLFTPTLLGFAACILISCERSFNLQFPAFSYD 1084

Query: 767  FRHKSGEDDW 776
            +  ++ E  W
Sbjct: 1085 WNSEADEVIW 1094


>gi|13509221|emb|CAC35330.1| N1-D protein [Linum usitatissimum]
          Length = 1108

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 232/799 (29%), Positives = 369/799 (46%), Gaps = 125/799 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L     +TF D++ L +G+ I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGETIGPSLIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I ++ YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTQNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +  +K  PE +  WK AL E   + G+          +I++I  +V   L A +      
Sbjct: 151 QHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEVELHLGANYALVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVSILQNKIISGILKKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      +  SR +ITTRD + L+     K + ++E+    +  LF + AFG D  
Sbjct: 331 FDEVLGKLNNFSMDSRFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGVDFP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+++ ++ A G+PL +KV+G  L    K  WE  + + + I   +++E LKISY
Sbjct: 391 PKDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVI--------------------SIFDASKSLINLD 408
           + L  ++K +FLDIAC+  G ++ E +                    S+    +S I  D
Sbjct: 451 NELTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRSLIQRSLIKFQRSRIKSD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
           +     MHD + D+GR IVR+E+   P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 ILNTFWMHDHIIDLGRAIVREENNKKPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +    K+ +LR+L      N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKELEKLTRLRYLSV---SNARLAGDFKDV-LPNLRWLRLHSCDSVPTGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---------- 578
            +KLV  ++    V   W     L   +      +T E   C  L ++PD          
Sbjct: 625 LKKLVQFELVDCSVRDGWKGWNEL--KVAHKLKAVTLE--RCFNLNKVPDFSHCRDLEWL 680

Query: 579 ---------------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                            ++L +L +  T I ++   +GRL  +K LI +  S+L+ +P  
Sbjct: 681 DFDECRNMRGEVDIGNFKSLRFLLISKTKITKIKGEIGRLLNLKYLI-AGGSSLKEVPAG 739

Query: 624 IRHLSKLTFLFISHCERLQT--LPELPCNLGLL-----SARNC--TSLEKLP--AGLSSM 672
           I  LS L FL ++  +  ++     LP +L  L     + ++C  TSLE L     LS++
Sbjct: 740 ISKLSSLEFLTLALNDPYKSDFTEMLPTSLMSLLISNDTQKSCPDTSLENLQRLPNLSNL 799

Query: 673 S--SVLY---VNLCNFLKL 686
              SVLY   V +C  L L
Sbjct: 800 INLSVLYLMDVGICEILGL 818


>gi|297791293|ref|XP_002863531.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309366|gb|EFH39790.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1158

 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 291/1104 (26%), Positives = 452/1104 (40%), Gaps = 275/1104 (24%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            + VF++FRGED R  F SHL   L   +IK FID+   +G+ + ++LL  I+ S IA+ I
Sbjct: 15   HQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPL-ETLLTKIQESRIALAI 73

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            FS +Y  S W                      FY++DPS VR     FG  F  L +R  
Sbjct: 74   FSGKYTESTWCLRELAMIKDCVEKGNLVAIPIFYKLDPSTVRGVRGQFGDAFRDLEERDV 133

Query: 101  EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEI-------------------------- 134
             K K WK AL    DL G   +   PES+++ EI                          
Sbjct: 134  LKKKEWKKALKWVPDLIGITVHNKSPESEILNEIVREVKKVLKKVPLKGSRNFFVEPSEG 193

Query: 135  ----ANDVLKRLDA--TFQSKNKGLVGVECSIEEIESLL-CIGSEGVCKLRIWGIGGISK 187
                A D  + +D   + + +     G++  ++E+E  L  I  +G   + + G+ GI K
Sbjct: 194  SRKVAVDRSEIIDTRTSAEGEKDKTFGIKQQLKELEDKLDLIKYKGTRVIGVVGMPGIGK 253

Query: 188  ITIAGAVFNKISRHFEGSYFAL---------NVREAEETGGIKDLQKKLLSELSKDGNMR 238
             T+   ++      F  S +AL         N R       + +     L+ L  D    
Sbjct: 254  TTLLKELYKTWKGKF--SRYALIDQIRGKSNNFRLECLPTLLLEKLLPELNNLQIDSVEE 311

Query: 239  NIESQLNRLARKKVRIVFDDVT----------------------SGSRVIITTRDKQVLK 276
              ++    L  +KV +V DDV+                       GSR++I T DK +LK
Sbjct: 312  PYKTHKGLLRERKVLVVLDDVSEREQIYALLGKYDLQNKHEWIKDGSRIVIATNDKSLLK 371

Query: 277  NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE---LTDKAIKYAQGVPLALKVL 333
                +  Y +++L + D  +LF   AF  D   A  ++   L+D+ + YA+G PLALK+L
Sbjct: 372  G-LVHDTYVVRQLNHRDGLQLFRYHAFHDDQAIAPKVDFMKLSDEFVHYARGHPLALKIL 430

Query: 334  GCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDE 393
            G  L  ++ + WE+ ++ L   P   I EV+++S+D L  +QK+ FLDIACF   +  D 
Sbjct: 431  GRELYEKNMKHWETKLKILAQSPTTYIGEVVQVSFDELSMAQKDAFLDIACF-RSQDVDY 489

Query: 394  VISIF--------DASKSLINLDLF----YRIRMHDLLRDMGREIVRKESINHPGKRNRL 441
            V S+         +A K+L N  L      R+ MHDLL    RE+  + S          
Sbjct: 490  VESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYTFSRELDLRAST--------- 540

Query: 442  WHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD------ 495
               +DI  V +K  G   + GI LD+++V  E  ++   F  M  L +L+FY        
Sbjct: 541  -QVQDIINVQQKTMGAADVRGIFLDLSEVKGETSLDREHFKNMRNLWYLKFYNSHCPQEC 599

Query: 496  --KNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR 551
               NK  +     +P  EVR L W + PL+ L  +     LV LK+  +++E+LW+ V+ 
Sbjct: 600  KTNNKINMPDGLELPLKEVRCLHWLKFPLEELPNDFDPINLVDLKLTYSEIERLWEGVKD 659

Query: 552  LP----------SSLCTFK----------------------------TPITFEIIDCKML 573
             P          S LC+                              +  T  + +C   
Sbjct: 660  TPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRNVNLMSLKTLTLSNCSNF 719

Query: 574  ERLPDELENLEYLTVKGTTIRELPES------------------------LGRLSWVKRL 609
            +  P   ENLE L + GT I +LP++                        LG L  +++L
Sbjct: 720  KEFPLIPENLEALYLDGTAISQLPDNVVNLKRLVLLNMKDCKMLETISTCLGELKALQKL 779

Query: 610  ILSNNSNLERIPE-----------------------------------------SIRHLS 628
            +LS    L+  PE                                          I  LS
Sbjct: 780  VLSGCLKLKEFPEINKSSLKFLLLDGTSIKTMPQLHSVQYLCLSRNDHISYLRVGINQLS 839

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            +LT L + +C +L  +PELP  L  L A  C+SL+ +   L+ + S +  N C F   + 
Sbjct: 840  QLTRLDLKYCTKLTYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQ-NHCTFNFTNC 898

Query: 689  NELSEIVKDGWMKHSL------------YEERGIKKSMY---FPGNEIPKWFRHQSMGSS 733
              L +  K+    ++             Y E    ++++   FPG E+P WF H+++GS 
Sbjct: 899  GNLEQAAKEEITSYAQRKCQLLPDARKHYNEGLSSEALFSTCFPGCEVPSWFCHEAVGS- 957

Query: 734  ATLKTRPPRPAGYNKLIS-FAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE 792
              L  R   P  +++ +S  A CAVV F           G+D    + ++V C +K K+E
Sbjct: 958  --LLQRKLLPHWHDERLSGIALCAVVSF---------LEGQDQI--SCFSVTCTFKIKAE 1004

Query: 793  GHLYSWFLGKISY----------VESDHVFLG---CNSFGGEYFGPNYDEFSFRIHCSFH 839
             + +  F   +            +ESDHVF+    C +        N D+ +F    S  
Sbjct: 1005 DNSWVPFTCPVGIWTREGDEKDKIESDHVFIAYISCPNTIRRLEDQNSDKCNF-TEASLE 1063

Query: 840  FPPYLERG--EVKKCGIHFVYAQD 861
            F      G  +V KCG+  VY  D
Sbjct: 1064 FTVTSGIGVFKVLKCGLSLVYEND 1087


>gi|358343944|ref|XP_003636055.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355501990|gb|AES83193.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1250

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 308/605 (50%), Gaps = 86/605 (14%)

Query: 117 SGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI------EEIESLLCIG 170
           +G        ES+LI +I   VL++L+       +  + + C+         I+SL+   
Sbjct: 162 AGVGHTAAMTESELIGDITGAVLRKLN------QQSTIDLTCNFIPDENYRSIQSLIKFD 215

Query: 171 SEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSE 230
           S  V  + +WG+GGI K T+A A+F ++S  ++GS F   V E  ++ GI     KLLS+
Sbjct: 216 STEVQIIGVWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSRGINYTCNKLLSK 275

Query: 231 LSKDGNMRNIESQLNRLARKKVR-----IVFDDV-----------------TSGSRVIIT 268
           L K+    +    ++ + R++++     IV DDV                  SGS VI+T
Sbjct: 276 LLKEDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIVT 335

Query: 269 TRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPL 328
           TRDK VL +      Y +K++   ++ +LFC  AF        ++EL+ +AI YA+G PL
Sbjct: 336 TRDKHVLISGGIKTIYEVKKMNSRNSLRLFCLNAFNKVSPKDGYVELSKRAIDYARGNPL 395

Query: 329 ALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG 388
           AL+VLG  L  ++++ W+ A  KL  IP+ EI+ + ++S++ LD +++N+FLDIA   +G
Sbjct: 396 ALQVLGSLLSCKNEKEWDCASAKLRKIPNNEIDSIFRLSFNELDKTEQNIFLDIAFVFKG 455

Query: 389 EHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHP 435
           + R+ +  I +               K+L+ +D    I+MH L+++MG++IVR+ES+ +P
Sbjct: 456 QERNSITKILNECGFFADIGISRLLDKALVTVDSENCIQMHGLIQEMGKQIVREESLKNP 515

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN--SYAFSKMPKLRFLRFY 493
           G+R+RL   +++Y VLK N G+E +E I LD  +    IH+N    AF  M  LR L F 
Sbjct: 516 GQRSRLCDPEEVYDVLKNNRGSEKVEAIYLDATE---SIHVNLRPDAFENMENLRLLAFQ 572

Query: 494 GDKNKCMV--SHLEGVPFAEVRHLEWPQCPLKTLNICA--EKLVSLKMPCTKVEQLWDDV 549
             +    +   H  G+    +R L W   PLKT+ + +  E LV L +  + VE+LW+ V
Sbjct: 573 DREGVTSIRFPHGLGLLPKNLRFLRWDGYPLKTVPLTSSLEMLVELSLKQSHVEKLWNGV 632

Query: 550 QRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRL 609
             LP+           EIID    ++L      +E   V G+     P        +K +
Sbjct: 633 VNLPN----------LEIIDLNGSKKL------IECPNVSGS-----PN-------LKEV 664

Query: 610 ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKLPA 667
           IL    ++  +  SI HL KL  L +  C  L++L    C+  L   S+  C +L++   
Sbjct: 665 ILRECESMPEVDSSIFHLQKLERLNVCGCTSLKSLSSNTCSPALRHFSSVYCINLKEFSV 724

Query: 668 GLSSM 672
            L+S+
Sbjct: 725 PLTSV 729



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 153/364 (42%), Gaps = 82/364 (22%)

Query: 552  LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLIL 611
            LP + C      +F +I  K+L   P      E + V+   + E+P+S+  LS +  L L
Sbjct: 767  LPENFCD-----SFYLI--KILSSGPAFRTVKELIIVEIPILYEIPDSISLLSSLVILRL 819

Query: 612  SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
               + ++ +PES+++L +L  + +S C+ LQ++P L   +  LS  +C SLE++ +    
Sbjct: 820  LCMA-IKSLPESLKYLPQLRLVHVSKCKLLQSIPALYRFIPNLSVWDCESLEEVLSSTGE 878

Query: 672  M---SSVLY-VNLCNFLKLDPNELSEIVKDGWMKHSL------YEERGIKKSMY-----F 716
            +    S+ Y V L N   LD +    ++KD  ++  L        E G K  ++      
Sbjct: 879  LYDKPSLYYIVVLINCQNLDTHSYQTVLKDAMVQIELEARENSENEYGHKDIIFNFLPAM 938

Query: 717  PGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV--------VFPAFLKYFR 768
            PG E   WF + S     TL+         + L+ FA+  V+        +   +  Y  
Sbjct: 939  PGME--NWFHYSSTEVCVTLELP-------SNLLGFAYYLVLSQGRIRSDIGFGYECYLD 989

Query: 769  HKSGE---------------DDWDGNVYAVCCDWKRKSEGHLYSWFLGK-----ISYVES 808
            + SGE                 W+G    +  D       HL  W+  +     +  VE 
Sbjct: 990  NSSGERIWKKCFKMPDLIQYPSWNGTSVHMISD-------HLVLWYDPESCKQIMDAVEQ 1042

Query: 809  DHVFLGCNSFGGEYFGPNYD---EFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADH 865
              V    N+        +YD    F+F I+ + +     +  E+K+CG H++Y +++   
Sbjct: 1043 IKVITDVNN-------TSYDPKLTFTFFINETLY-----DEVEIKECGFHWIYQEETVSS 1090

Query: 866  ILKD 869
            I+ +
Sbjct: 1091 IISE 1094


>gi|13517474|gb|AAK28809.1|AF310962_1 resistance-like protein P3-B [Linum usitatissimum]
          Length = 1188

 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 223/765 (29%), Positives = 357/765 (46%), Gaps = 165/765 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG+DTRD FTSHL   LS K I+ FID++L + ++I + L+  ++   +++++
Sbjct: 21  YDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESIDE-LISILQRCPLSVVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSER+A S W                      FY+VDPS V+ +SH  G           
Sbjct: 80  FSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGP---------- 129

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVECS 159
              KRW +AL   A  +G  S  I+ ES+LI+ +   V K+L     S N+  LV +   
Sbjct: 130 ---KRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSR 186

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE-AE 215
           I E+E LL +   +  C + +WG+GG+ K T+A A +++++   +G    F  NV E  E
Sbjct: 187 IFEVERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCE 246

Query: 216 ETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV------------ 259
           +  G+  +  KL S+L  + N+     NI  +  RL+R +V +V D+V            
Sbjct: 247 KHHGVDKIVHKLYSKLLDENNIDREDLNIAYRRERLSRLRVFVVLDNVETLEQLEKLALG 306

Query: 260 ---------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D    
Sbjct: 307 YVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDEESIRLFSLHAFKQDRPQD 365

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           + +  +  A  Y +G PLALK+LG  L       W+S +  L    ++ +E +L+ SYD 
Sbjct: 366 NWMGKSCLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLRQSGNLGMETILRRSYDK 425

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY--------RIR 414
           L   +K +F+D+AC L G  R  +I    +++ +S    K LI+  L           I 
Sbjct: 426 LGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSENGEMIE 485

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI---------- 460
           +HDLL++M   IV++E     GKR+RL    D++++L     KN  T  +          
Sbjct: 486 VHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVI 543

Query: 461 -------------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD 495
                                    EGI LD++K  +E+++ + AF  M  L FL+F   
Sbjct: 544 PKRKKRKVTDMHQKGDDPLEEHRTTEGIRLDLSK-TKEMYLKANAFEGMNSLTFLKFESP 602

Query: 496 KNKCMVSHLEGV------PF-------AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCT 540
           + K     L+ V      P+         +R L+W   P K+L      + LV L +  +
Sbjct: 603 EIKYPRYRLKNVKTKIHLPYDGLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHLIIRDS 662

Query: 541 KVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESL 600
            +++ W+   +    L      I  ++  C  L  +PD   +L                 
Sbjct: 663 PIQRCWEGYDQ--PQLVNL---IVLDLCYCANLIAIPDISSSLN---------------- 701

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                ++ L+L    +L  +P  +++L+KL  L IS+CE L+ LP
Sbjct: 702 -----IEELLLFGCKSLVEVPFHVQYLTKLVTLDISYCENLKPLP 741



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 41/335 (12%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPESLGRLSW 605
            ++ LP       T  +  +  C+ L  +P  + NL  L    +  T I+ LP S+  L  
Sbjct: 870  IESLPEISEPMNTLTSLRVCCCRSLTSIPTSISNLRSLGSLCLSKTGIKSLPSSIQELRQ 929

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L    +LE IP SI  LSKL    +S CE + +LPELP NL  L    C SL+ L
Sbjct: 930  LHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSGCKSLQAL 989

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   +LY+N  +F    +LD    +E V +  +  SL    ER ++ S    G+E
Sbjct: 990  P---SNTCKLLYLNTIHFEGCPQLDQAIPAEFVANFLVHASLSPSYERQVRCS----GSE 1042

Query: 721  IPKWFRHQSMGSS--ATLKTRPP---RPAGYNKLISFAFCAVVVFPAFLKYFRH------ 769
            +P+WF ++SM     +T+K   P       +  +   AF  V     +  + R       
Sbjct: 1043 LPEWFSYRSMEDEDCSTVKVELPLANDSPDHPTIKGIAFGCVYFSDPYYPWTRMGWRCEV 1102

Query: 770  -KSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYD 828
              +    W  N   V    ++KS   ++  F   +S            S G E     Y 
Sbjct: 1103 GNTTVASWLSNEKGVLTGREKKSSEKVWLVFKKNLS---------STGSMGSEEDEAWYV 1153

Query: 829  EF-SFRIHCSFHF----PPYLERGEVKKCGIHFVY 858
            ++  F +  +F+F       +++ ++K+CG+  +Y
Sbjct: 1154 KYGGFAVSFNFYFLDNDDEIMKKVKIKRCGVSLMY 1188


>gi|449530525|ref|XP_004172245.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 623

 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 209/640 (32%), Positives = 316/640 (49%), Gaps = 92/640 (14%)

Query: 37  QLIRGDNISQSLLGTIEASCIAIIIFSERYASSRW---------------------FFYR 75
           +L RG+ I  SLL  IE S I+I++ SE YASS W                      FY+
Sbjct: 2   KLSRGEEICASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYK 61

Query: 76  VDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIA 135
           VDPS V KQS  FG  F++L  RF  KM+ WK AL   + +SG+       E+ LI+ I 
Sbjct: 62  VDPSEVGKQSGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRDDEANLIQNIV 121

Query: 136 NDVLKRLD-ATFQ-SKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGA 193
            +V K+LD AT Q    K  VG++  +  +  L  + S G+    ++G+GG+ K TIA A
Sbjct: 122 QEVWKKLDRATMQLDVAKYPVGIDIQVRNL--LPHVMSNGITMFGLYGVGGMGKTTIAKA 179

Query: 194 VFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGNM------RNIESQLNR 246
           ++NKI+  FEG  F  N+REA  + GG+   QK+LL E+  D ++      R I    NR
Sbjct: 180 LYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLCEILMDDSIKVSNLPRGITIIRNR 239

Query: 247 LARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELV 290
           L  KK+ ++ DDV +                GS+VI TTR+KQ+L     +K   +  L 
Sbjct: 240 LYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVIATTRNKQLLVTHGFDKMQNVGGLD 299

Query: 291 YADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMR 350
           Y +A +LF    F   H    ++EL+ +A+ Y +G+PLAL+VLG +L         S  +
Sbjct: 300 YDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLPLALEVLGSFLHSIGD---PSNFK 356

Query: 351 KL--EIIPHV---EIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS---- 401
           ++  E   H    +I++ L+ISYD L+D  K +F  I+C    E   +V  + +A     
Sbjct: 357 RILDEYEKHYLDKDIQDSLRISYDGLEDEVKEIFCYISCCFVREDICKVKMMLEACGCLC 416

Query: 402 -----KSLINLDL-----FYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
                  L+NL L     F R+ MH++++ MGR I   E+ +   KR RL    D   VL
Sbjct: 417 LEKGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTIHLSET-SKSHKRKRLLIKDDAMDVL 475

Query: 452 KKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAE 511
             N    A++ I L+  K  + + ++S AF K+  L  L   G+      S LE +P + 
Sbjct: 476 NGNKEARAVKVIKLNFPKPTK-LDIDSRAFDKVKNLVVLEV-GNATSSESSTLEYLP-SS 532

Query: 512 VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVE---QLWDDVQRLPSSLCTFKTPITFE 566
           +R + WPQ P  +L      E L+ LK+P + ++   Q +   +RL              
Sbjct: 533 LRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQGYMSCERLKE----------IN 582

Query: 567 IIDCKMLERLPD--ELENLEYLTVKGT-TIRELPESLGRL 603
           + D  +L  +PD     NL+YL + G   + ++ ES+G L
Sbjct: 583 LSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGSL 622


>gi|147841246|emb|CAN75617.1| hypothetical protein VITISV_010165 [Vitis vinifera]
          Length = 608

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 208/603 (34%), Positives = 318/603 (52%), Gaps = 76/603 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRGEDTR NFT HL+  L  K I TF DD+ L RG+ I+ SLL  IE S  A++
Sbjct: 21  YEVFLSFRGEDTRRNFTGHLYAALIRKGIVTFRDDEGLSRGEEIAPSLLTAIEKSRCALV 80

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS-RLRKR 98
           I SE YA SRW                      FY VDPSHVR Q   +G   +   R  
Sbjct: 81  ILSEHYADSRWCLEELAKIMEWRAEMGLIVYPVFYHVDPSHVRHQRGHYGEALADHERNG 140

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
              + +RW+ ALTE A+LSG+ +     ES+++ +I   +L R        +K LVG++ 
Sbjct: 141 SGHQTQRWRAALTEVANLSGWHAEN-GSESEVVNDITRTILARFTRKHLHVDKNLVGMDD 199

Query: 159 SIEE-IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            + E I  ++ + S  V  + I+G+GGI K T+A  V+N+I+  F  + F  NVRE  ++
Sbjct: 200 RLNEVIPQMIDLSSNEVRMIGIYGLGGIGKTTVAKVVYNRIAPLFMITSFIANVREDSKS 259

Query: 218 GGIKDLQKKLLSEL--SKDGNMRNIESQL----NRLARKKVRIVFDDVTS---------- 261
            G+  LQK+LL E+  S+   + N++  +    +RL  K V ++ DDV +          
Sbjct: 260 RGLLHLQKQLLHEILPSRKNFISNVDEGIHMIQDRLCFKSVLLILDDVDTLDQLEGLAGD 319

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+I+ TRD+ +L     +  Y +K+L   +A +LF Q AF   H    +  L
Sbjct: 320 CNWFGPGSRIIVXTRDRHLLDVHKMDAFYEVKKLDQMEAIELFSQHAFEQKHPKEDYETL 379

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           ++  ++   G+PL LKVLG +L G++   W+S ++KL+       +++ K       D  
Sbjct: 380 SNSMVRCVDGLPLGLKVLGRFLFGKTILEWKSELQKLK-------QDLTK----KFKDKD 428

Query: 376 KNVFLDIACFLEGEHRDEVISIFDASKSLINLDLF-YRIRMHDLLRDMGREIVRKESINH 434
           +   +  AC    E    V+S     K LI  D+F  +I MH LL+ MGR+IVR++    
Sbjct: 429 RVTRILDACNFSAEIGIGVLS----DKCLI--DIFDNKISMHALLQQMGRDIVRQKYPED 482

Query: 435 PGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY- 493
           P K +RL + K + +VL +  GT+AI+GI  +++ + + IH+ + +F  M KLR L+ Y 
Sbjct: 483 PEKWSRLCYPKVVNRVLTRKLGTKAIKGILFNLS-IPKRIHITTKSFEMMTKLRLLKIYW 541

Query: 494 -------GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQ 544
                   + NK  +S     P  E+R+L W   PL++L  +  A  LV L M  + ++Q
Sbjct: 542 AHESISMREDNKVKLSKDFEFPSYELRYLYWHGYPLESLPSSFYAVDLVELDMCYSNLKQ 601

Query: 545 LWD 547
           LW+
Sbjct: 602 LWE 604


>gi|13509207|emb|CAC35321.1| Ngc-D protein [Linum usitatissimum]
          Length = 1108

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 224/785 (28%), Positives = 356/785 (45%), Gaps = 113/785 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L     +TF D++ L +G  I  SL+  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGTIGPSLIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I +  YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTPNYASSKWCLQELAKMVGCWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
              +K  PE +  WK AL E  ++ G+          +I++I  +V   L A +      
Sbjct: 151 EHSQKHDPETVLEWKEALQEVGEMKGYHVTESDGHGSIIDKILTEVELHLGANYALVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      ++ SR +ITTRD + L+     K + ++E+    +  LF + AF  D  
Sbjct: 331 FDDVLGKLNNFSTNSRFLITTRDARGLELLQEYKMFELQEMSPDHSLTLFNKHAFDVDCP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+ + ++ A G+PL +KV+G  L    K  WE  + + + I   +++E LKISY
Sbjct: 391 PKDYAILSKEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVI--------------------SIFDASKSLINLD 408
           + L  ++K +FLDIAC+  G  +   I                    S+    +S I  D
Sbjct: 451 NELTHNEKQIFLDIACYFIGSQKIYPIFMWEDCDFYPESTIRSLIQRSLIKLQRSRIKGD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
           +     MHD + D+GR IVR+E   +P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 VLNTFWMHDHIIDLGRAIVREEKNQNPYKRSRIWSNKDAVNMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +  F K+  LR+L+     N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKEFEKLTMLRYLKV---SNARLAGDFKDV-LPNLRWLLLESCDSVPSGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---------- 578
            +KLV L +    V   W     L  +    +      +  C  L+++PD          
Sbjct: 625 LKKLVRLDLHDCSVGDSWKGWNELKVA----RKLKAVSLKRCFHLKKVPDFSDCGDLEFL 680

Query: 579 ---------------ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                            ++L +L +  T I ++   +GRL  +K L +  +S+L+ +P  
Sbjct: 681 NFDGCRNMRGEVDIGNFKSLRFLYISKTKITKIKGEIGRLLNLKYLSV-GDSSLKEVPAG 739

Query: 624 IRHLSKLTFLFISHCERLQT--LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC 681
           I  LS L FL ++  +  ++     LP +L LL   N T  +K     SS +     NL 
Sbjct: 740 ISKLSSLEFLALALTDSYKSDFTEMLPTSLTLLYISNDT--QKFCPDTSSENLQRLPNLS 797

Query: 682 NFLKL 686
           N + L
Sbjct: 798 NLINL 802


>gi|359486120|ref|XP_003633392.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1218

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 185/513 (36%), Positives = 266/513 (51%), Gaps = 98/513 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFLSFRGEDTR NFT HL+  L  + I+TF DD+L RG+ I+  LL  IE S  ++I+
Sbjct: 24  YDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDKLRRGEVIAPELLKAIEESRSSVIV 83

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSE YA SRW                      FY VDPSHVRKQ  SFG  F+R  + + 
Sbjct: 84  FSENYARSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHVRKQEGSFGEAFARYEENWK 143

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSI 160
           +K+ RW+ ALTEAA+LSG+   +   ES  I+EI N++ +RL+      +  LVG++  +
Sbjct: 144 DKIPRWRRALTEAANLSGWHP-LDGYESDYIKEITNNIFRRLNCKRLDVDANLVGIDSRV 202

Query: 161 EEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGI 220
           +E+   L + S  V  + I+G+GGI K TIA  ++N++   FE   F  N+R    T G+
Sbjct: 203 KEVSLRLHMESSDVRIVGIYGVGGIGKTTIAKVIYNELCCEFEYMSFLENIRGISNTKGL 262

Query: 221 KDLQKKLLSELSKDGNMRNIESQLNR--------LARKKVRIVFDDVTS----------- 261
             LQ +LL ++ +    +NI + ++R        L+ K V IV DDV             
Sbjct: 263 THLQNQLLGDILEKERSQNI-NIVDRGASMIGTILSSKTVFIVLDDVDDRNQLKALLRHC 321

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELT 316
                GSRVIITTR+K +L     ++ Y ++ L   +A +LF   AF  +   +  I L+
Sbjct: 322 GWLGKGSRVIITTRNKHLLIEQKVDELYEVEGLNSKEACELFSLHAFKQNLPKSDFINLS 381

Query: 317 DKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQK 376
            + + Y QG+PLAL+V                   LE +P  EI +VLK SYD LD ++K
Sbjct: 382 WRMVDYCQGLPLALEV-------------------LEPVP--EIHKVLKSSYDGLDLTEK 420

Query: 377 NVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPG 436
           ++ LD+ACF +G                          MHDL++ M  +IVR+     P 
Sbjct: 421 DILLDVACFFKG--------------------------MHDLIQQMCWKIVRENFPKEPD 454

Query: 437 KRNRLWHHKDIYQVLKKNTGT----EAIEGISL 465
           K +RLW   DI + L  +  +    EA++  SL
Sbjct: 455 KWSRLWDPHDIERALTTSEYSSNLLEAVKNSSL 487



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 65/328 (19%)

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK----------------- 496
             G + +E I LD++K+ R +  NS  FSKM  LR LR + +                  
Sbjct: 666 TAGIKGVETIDLDLSKLKR-VRFNSNVFSKMTSLRLLRVHSNDYFYPYSYDNMEEEKVDR 724

Query: 497 ------NKCMVS----HLEG---VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK 541
                 +  M +    HL+    +P  E+R+L W   PL  L  N   E LV L + C+ 
Sbjct: 725 YCEEMIDSVMKTASKMHLDPDFEIPSYELRYLCWDGYPLDFLPSNFDGENLVELHLKCSN 784

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIID---CKMLERLPD--ELENLEYLTVKG-TTIRE 595
           ++QLW   + L S           ++ID      L ++P+   + NLE L +KG  ++ +
Sbjct: 785 IKQLWQGKKDLES----------LKVIDLSHSNKLVQMPEFSSMPNLEELILKGCVSLID 834

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN---LG 652
           +  S+G L     L L++   L+ +P SI +L  L  L+++ C       E+  N   L 
Sbjct: 835 IHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYLTRCSSFDKFSEIQGNMKSLK 894

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE---ERG 709
            L  R  T++ +LP+ +  + SV  ++L      D ++  +  ++G    SLY+   E  
Sbjct: 895 FLYLRK-TAIRELPSSI-DLESVEILDLS-----DCSKFEKFPENGANMKSLYDLSLENT 947

Query: 710 IKKSMYFPGNEIPKWFRHQSMGSSATLK 737
           + K +      I  W   Q++  S+ LK
Sbjct: 948 VIKEL---PTGIANWESLQTLDLSSCLK 972



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 28/161 (17%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++ ++ ++  C   E+ P++   +++L+ L +  T I++LP+S+G L  
Sbjct: 1043 IKDLPDSIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLES 1102

Query: 606  VKRLILSNNSNLER-----------------------IPESIRHLSKLTFLFISHCERLQ 642
            ++ L LS  S  E+                       +P+SI  L  L  L +S+C + +
Sbjct: 1103 LEILDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSYCSKFE 1162

Query: 643  TLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNLC 681
              PE   N+  L       T+++ LP  +  + + +Y+ +C
Sbjct: 1163 KFPEKGGNMKSLKQLYLINTAIKDLPDSIGDLEANIYIIIC 1203



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 28/160 (17%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP+ +  +++  T ++  C   E+ P++   +++L+ L   GT I++LP+S+G L  
Sbjct: 949  IKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLES 1008

Query: 606  VKRLILSNNSNLERIPE-----------------------SIRHLSKLTFLFISHCERLQ 642
            +K L LS  S  E+ PE                       SI  L  L  L +S C + +
Sbjct: 1009 LKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIGDLESLVSLDLSKCSKFE 1068

Query: 643  TLPELPCNLGLLSA--RNCTSLEKLPAGLSSMSSVLYVNL 680
              PE   N+  L     N T+++ LP  +  + S+  ++L
Sbjct: 1069 KFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDL 1108



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 15/141 (10%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++    ++  C   E+ P++   +++L  L +K T I++LP+S+G L  
Sbjct: 996  IKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIGDLES 1055

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG------LLSARNC 659
            +  L LS  S  E+ PE   ++  L  L++++      + +LP ++G      +L    C
Sbjct: 1056 LVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNN----TAIKDLPDSIGDLESLEILDLSKC 1111

Query: 660  TSLEKLPAGLSSMSSV--LYV 678
            +  EK P    +M S+  LYV
Sbjct: 1112 SKFEKFPKKGGNMKSLKRLYV 1132



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 11/124 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDE---LENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP S+   ++    ++  C   E+ P +   +++L+ L VK T I++LP+S+G L  
Sbjct: 1090 IKDLPDSIGDLESLEILDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLES 1149

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR----NCTS 661
            +K L LS  S  E+ PE   ++  L  L++ +      + +LP ++G L A      C  
Sbjct: 1150 LKILDLSYCSKFEKFPEKGGNMKSLKQLYLIN----TAIKDLPDSIGDLEANIYIIICAG 1205

Query: 662  LEKL 665
            +EKL
Sbjct: 1206 VEKL 1209



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 33/227 (14%)

Query: 485  PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQ 544
            P +  L+ +   N      L+G+P + + +LE  +C   T     +K   ++     ++ 
Sbjct: 837  PSVGVLKKFTTLNLTSCVKLKGLP-SSISNLEALECLYLTRCSSFDKFSEIQGNMKSLKF 895

Query: 545  LW---DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYL---TVKGTTIRELPE 598
            L+     ++ LPSS+   ++    ++ DC   E+ P+   N++ L   +++ T I+ELP 
Sbjct: 896  LYLRKTAIRELPSSI-DLESVEILDLSDCSKFEKFPENGANMKSLYDLSLENTVIKELPT 954

Query: 599  SLGRLSWVKRLILS-----------------------NNSNLERIPESIRHLSKLTFLFI 635
             +     ++ L LS                       N + ++ +P+SI  L  L  L +
Sbjct: 955  GIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLESLKILDL 1014

Query: 636  SHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSVLYVNL 680
            S+C + +  PE   N+  L   N   T+++ LP  +  + S++ ++L
Sbjct: 1015 SYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIGDLESLVSLDL 1061


>gi|15222527|ref|NP_176560.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324940|gb|AAG52419.1|AC011622_7 putative disease resistance protein; 27010-23648 [Arabidopsis
           thaliana]
 gi|332196017|gb|AEE34138.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 966

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 221/738 (29%), Positives = 362/738 (49%), Gaps = 85/738 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R    SHL        I  F D ++ RG  IS  L   I  S I+I++
Sbjct: 13  YRVFTSFHGPDVRKTVLSHLRKQFICNGITMFDDQRIERGQTISPELTRGIRESRISIVV 72

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YASS W                      FY VDPS VRKQ+  FG  FS    R  
Sbjct: 73  LSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGEFGIRFSETWARKT 132

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E+ K +W  AL +  +++G        ESK++E IA DV  +L+ T     + +VG+E  
Sbjct: 133 EEEKQKWSQALNDVGNIAGEHFLNWDKESKMVETIARDVSNKLNTTISKDFEDMVGIEAH 192

Query: 160 IEEIESLLCIGSE------GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE 213
           +++++SLL + +E      G+C     G  GI K TIA A+ +++S  F+ + F  N++ 
Sbjct: 193 LQKMQSLLHLDNEDEAMIVGIC-----GPSGIGKTTIARALHSRLSSSFQLTCFMENLKG 247

Query: 214 A-----EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS----- 261
           +     +E G    LQ++LLS++    ++R  ++ +   RL  + V I+ D V       
Sbjct: 248 SYNSGLDEYGLKLCLQQQLLSKILNQNDLRIFHLGAIPERLCDQNVLIILDGVDDLQQLE 307

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSR+I+TT D+++L+    N  Y +      +A K+FC+ AF       
Sbjct: 308 ALTNETSWFGPGSRIIVTTEDQELLEQHDINNTYHVDFPTIKEARKIFCRSAFRQSSAPY 367

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
              +L ++ +K    +PL L+V+G  L  + ++ WES + + E     +IE VL++ YD+
Sbjct: 368 GFEKLVERVLKLCSNLPLGLRVMGSSLRRKKEDDWESILHRQENSLDRKIEGVLRVGYDN 427

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHD 417
           L  + + +FL IA F   +  D V ++               A KSLI + +   I MH 
Sbjct: 428 LHKNDQFLFLLIAFFFNYQDNDHVKAMLGDSKLDVRYGLKTLAYKSLIQISIKGDIVMHK 487

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL+ +G+E V+++  +H GKR  L    +I  VL+ ++G   + GIS D++ +  +++++
Sbjct: 488 LLQQVGKEAVQRQ--DH-GKRQILIDSDEICDVLENDSGNRNVMGISFDISTLLNDVYIS 544

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVS-HL-EGVPF-AEVRHLEWPQCPLKTL--NICAEKL 532
           + AF ++  LRFL  Y  +    V  HL E + F  ++R L W   P K+L      E L
Sbjct: 545 AEAFKRIRNLRFLSIYKTRLDTNVRLHLSEDMVFPPQLRLLHWEVYPGKSLPHTFRPEYL 604

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVK-GT 591
           V L +   ++E+LW+ +Q     L   K        + K+L  L D   NLE L +    
Sbjct: 605 VELNLRDNQLEKLWEGIQ----PLTNLKKMELLRSSNLKVLPNLSDA-TNLEVLNLALCE 659

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           ++ E+P S+G L  +++LI+     L+ +P    +L+ L  L +  C +L+ +P++  N+
Sbjct: 660 SLVEIPPSIGNLHKLEKLIMDFCRKLKVVPTHF-NLASLESLGMMGCWQLKNIPDISTNI 718

Query: 652 GLLSARNCTSLEKLPAGL 669
             L   + T LE LP  +
Sbjct: 719 TTLKITD-TMLEDLPQSI 735


>gi|15230525|ref|NP_190725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572078|emb|CAB63021.1| propable disease resistance protein [Arabidopsis thaliana]
 gi|332645286|gb|AEE78807.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1226

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 234/842 (27%), Positives = 367/842 (43%), Gaps = 158/842 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRGE+ R++F SHL   L    +  FID    +G  +       IE S IA+ I
Sbjct: 19  HQVFVNFRGEELRNSFVSHLRSALVRHGVNIFIDTNEEKGKPL-HVFFQRIEESRIALAI 77

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS RY  S+W                      FY+V    VR Q   FG  F  LR    
Sbjct: 78  FSVRYTESKWCLNELVKMKECMDKGKLLIIPIFYKVKAYEVRYQKGRFGCVFKNLRNVDV 137

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL---------DA-TFQSKN 150
            K  +W  AL+  AD  GF  +    E   I  I  +V + L         DA  + SKN
Sbjct: 138 HKKNQWSEALSSVADRIGFSFDGKSDEHNFINGIVEEVKEALSKILLDKTKDAFVYHSKN 197

Query: 151 KGL---------VGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRH 201
             +          G++  +EE++  L +  E    L + G+ GI K T+A  ++  +   
Sbjct: 198 NSMSVGREKHEIYGLKQRLEELKEKLDLDCEETRILGVVGMPGIGKTTLAREIYETLRCK 257

Query: 202 FEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQL-------NRLARKKVRI 254
           F       ++R   +  G+ D    LL E      + +IES           L   KV +
Sbjct: 258 FLRHGLIQDIRRTSKEHGL-DCLPALLLEELLGVTIPDIESTRCAYESYKMELHTHKVLV 316

Query: 255 VFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLF 298
           V DDV+                 GSR++I T DK ++++  A+  Y + +L + D    F
Sbjct: 317 VLDDVSDKEQIDVLLGRCNWIRQGSRIVIATSDKSLIQDV-ADYTYVVPQLNHKDGLGHF 375

Query: 299 CQWAF---GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
            ++AF      H +   ++L+ + + Y +G PL LK+LG  L G+ ++ W++ +  L   
Sbjct: 376 GRYAFDRHSNIHNNEVIMKLSKEFVHYGRGHPLVLKLLGADLNGKDEDHWKTKLATLAEN 435

Query: 356 PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS------KSLINLDL 409
               I +VL++SYD L    K++FLDIACF   E    + S+ D+S      K+L+N  +
Sbjct: 436 SSHSIRDVLQVSYDELSQVHKDIFLDIACF-RSEDESYIASLLDSSEAASEIKALMNKFM 494

Query: 410 FY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL 465
                 R+ MHDLL    RE+ R+       + +RLWHH+DI  VLK       + GI L
Sbjct: 495 INVSEDRVEMHDLLYTFARELCRRAYAQDGREPHRLWHHQDITDVLKNIEEGAEVRGIFL 554

Query: 466 DMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEGVPFAEVRHLEW 517
           +MN++ RE+ ++S  F  M  LR+L+ Y           NK  +      P  EVR+L W
Sbjct: 555 NMNEMKREMSLDSCTFKSMCGLRYLKIYSSHCPQQCKPNNKINLPDGLNFPLKEVRYLHW 614

Query: 518 PQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR--LP----------------SSLC 557
            + PLK +  +   + LV LK+P +K+E++W D +    P                S L 
Sbjct: 615 LEFPLKEIPPDFNPQNLVDLKLPHSKIERIWSDDKHKDTPKLKWVNLSHSSNLWDISGLS 674

Query: 558 TFKTPITFEIIDCKMLERLPD------EL----------------ENLEYLTVKGTTIRE 595
             +  +   +  C  L+ LP+      E+                +NLE L + GT+I+E
Sbjct: 675 KAQRLVFLNLKGCTSLKSLPEINLVSLEILILSNCSNLKEFRVISQNLETLYLDGTSIKE 734

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP------- 648
           LP +   L  +  L +   + L+  P+ +  L  L  L +S C +LQ  P +        
Sbjct: 735 LPLNFNILQRLVILNMKGCAKLKEFPDCLDDLKALKELILSDCWKLQNFPAICERIKVLE 794

Query: 649 ---------CNLGLLSARNCTSLEK------LPAGLSSMSSVLYVNL--CNFL----KLD 687
                      + ++S+  C  L K      LP  +S +S + +++L  C  L    KL 
Sbjct: 795 ILRLDTTTITEIPMISSLQCLCLSKNDHISSLPDNISQLSQLKWLDLKYCKSLTSIPKLP 854

Query: 688 PN 689
           PN
Sbjct: 855 PN 856



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 204/490 (41%), Gaps = 108/490 (22%)

Query: 470  VNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNIC 528
            VN     N +  S + K + L F   K    +  L  +    +  L    C  LK   + 
Sbjct: 659  VNLSHSSNLWDISGLSKAQRLVFLNLKGCTSLKSLPEINLVSLEILILSNCSNLKEFRVI 718

Query: 529  AEKLVSLKMPCTKVEQL---WDDVQRL--------------PSSLCTFKTPITFEIIDCK 571
            ++ L +L +  T +++L   ++ +QRL              P  L   K      + DC 
Sbjct: 719  SQNLETLYLDGTSIKELPLNFNILQRLVILNMKGCAKLKEFPDCLDDLKALKELILSDCW 778

Query: 572  MLERLP---DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
             L+  P   + ++ LE L +  TTI E+P     +S ++ L LS N ++  +P++I  LS
Sbjct: 779  KLQNFPAICERIKVLEILRLDTTTITEIP----MISSLQCLCLSKNDHISSLPDNISQLS 834

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMS------SVLYVNLCN 682
            +L +L + +C+ L ++P+LP NL  L A  C SL+ +   L+ ++      S   +  CN
Sbjct: 835  QLKWLDLKYCKSLTSIPKLPPNLQHLDAHGCCSLKTVSNPLACLTTAQQIYSTFILTNCN 894

Query: 683  FLKLDPNE---------------------------------LSEIVKDGWMKHSLYEERG 709
             L+    E                                 +S+I     +  S+  +  
Sbjct: 895  KLERSAKEEISSFAQRKCQLLLDAQKRCNVSSLISFSICCYISKIFVSICIFLSISMQNS 954

Query: 710  IKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKY 766
              + ++   FPG+E+P WF H+++G    L+ R P     N+L   A CAVV FP     
Sbjct: 955  DSEPLFSICFPGSELPSWFCHEAVG--PVLELRMPPHWHENRLAGVALCAVVTFP----- 1007

Query: 767  FRHKSGEDDWDGNVYAVCCDWKRK-SEGHL--YSWFLGK-------ISYVESDHVFLG-- 814
               KS E     N ++V C +K +  EG    +S+ +G+       ++ + S+HVF+G  
Sbjct: 1008 ---KSQE---QINCFSVKCTFKLEVKEGSWIEFSFPVGRWSNQGNIVANIASEHVFIGYI 1061

Query: 815  -CNS----FGGEYFGPNYDEFSFR------IHCSFHF-----PPYLERGEVKKCGIHFVY 858
             C+        +YF  +    S +         S +F        L R EV KCG+ F  
Sbjct: 1062 SCSKIFKRLENQYFSSSNPTRSTQSSKCSPTKASLNFMVIDGTSELPRIEVLKCGLRFFK 1121

Query: 859  AQDSADHILK 868
               S+ + LK
Sbjct: 1122 GVGSSGNYLK 1131


>gi|13509227|emb|CAC35333.1| N2-C protein [Linum usitatissimum]
          Length = 1119

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 218/758 (28%), Positives = 350/758 (46%), Gaps = 101/758 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG D R  F  HL+  L     +TF D++ +R G  I  S++  I  S I I 
Sbjct: 31  YEVFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGTIGPSIIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I +  YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +  +K  PE +  WK AL E   + G+          +I++I  +V   L A ++     
Sbjct: 151 QHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEVELHLRANYKLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+   FE  +F  N+
Sbjct: 211 LVGIDSPVDEVVGLLNLDSSASEKIIGIHGMGGLGKTTLAKAVYDKVFTRFERCFFLENI 270

Query: 212 REA-EETGGIKDLQKKLLSE-LSKDGNMRNIESQ-----LNRLARKKVRIVFDDV----- 259
           R+   E  G+  +Q K++S  L KD N     S       +R+ R K+ IV DDV     
Sbjct: 271 RDTLSEKNGVLIMQNKIISGILRKDFNEAKYASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      +  SR +ITTRD + L+     K + ++E+    +  LF + AFG D  
Sbjct: 331 FDEVLGKLDNFSMDSRFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGVDCP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+ + ++ A G+PL +KV+G  L    K  WE  + +L+ I   +++E LKISY
Sbjct: 391 PEDYAILSKEFVQAAAGLPLYIKVIGSLLFCMDKIFWEEKLEELKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINL-------D 408
           + L  ++K +FLDIAC+  G  + E I ++                +SLI L       D
Sbjct: 451 NELTHNEKQIFLDIACYFIGLSKIEPILMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGD 510

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
                +MH+ +RD+GR IVR+E+  +P KR+R+W +KD   +LK   GT+ +E +++DM 
Sbjct: 511 DINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDME 570

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               ++ + +    K+ +LR+L      N  +    + V    +R L    C      + 
Sbjct: 571 --GEDLILTNKELEKLTRLRYLSV---SNARLAGDFKDV-LPNLRWLRLHSCDSVPTGLY 624

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYL 586
             KLV L++    V   W     L  +    +      +  C  L+++PD  + E+LE+L
Sbjct: 625 LNKLVDLELVDCSVRDGWKGWNELKVA----RKLKAVSLKRCFHLKKVPDFSDCEDLEWL 680

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
                        +G    ++ L++S N+ + +I   I  L  L +L   H     +L E
Sbjct: 681 AFSECRKMRGEVDIGNFKSLRYLLIS-NTKITKIKGEIGRLRNLKYLHADH----SSLKE 735

Query: 647 LPCNLGLLSARNCTSL-----------EKLPAGLSSMS 673
           +P  +  LS+    SL           E LPA L+ +S
Sbjct: 736 VPAGISKLSSLEWLSLTLTDPYKSDFTEMLPASLTVLS 773


>gi|9758746|dbj|BAB09118.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1031

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 226/727 (31%), Positives = 334/727 (45%), Gaps = 98/727 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +  SHL+  L+ + I TF DD+ +  GD+IS+ L   IE S   ++
Sbjct: 12  YDVFLSFRGEDTRHSIVSHLYEALTSRGIATFKDDKRLELGDHISEELQRAIEGSDFVVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE Y +SRW                      FYRV+PS VR Q  SF     +   + 
Sbjct: 72  VLSENYPTSRWCLMELQSIMELQMEGRLGVFPVFYRVEPSAVRYQLGSFDLEGYQRDPQM 131

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            + + +W+ AL   ADLSG  S     E+ ++ +I  D+ KR     +   +  VGV+  
Sbjct: 132 ADMVPKWRQALKLIADLSGVASGQCIDEATMVRKIVEDISKRKTLKHKIDFRNFVGVDTH 191

Query: 160 IEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
           ++ ++SLL + S    V  + IWG+GGI K TIA  +++++S  F  SYF  +++   + 
Sbjct: 192 LQGLKSLLDMDSNNDEVRMIGIWGMGGIGKTTIAKCLYDQLSSQFTASYFTQDIKGIHKE 251

Query: 218 GGIKDLQKKLLSELSKDGNM-----RNIESQLNRLARKKVRIVFDDVTS----------- 261
             +  LQ +LL     D  M        E    RL   KV +V D V             
Sbjct: 252 LDLLHLQNRLLYNTLGDDIMPWSVEAGREVIAARLGNHKVLLVLDGVDKLVQIHALAKET 311

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GGDHLDASHIEL 315
                 SR+IITTRDK +L +C     Y +K L   D+ ++F Q AF GG        +L
Sbjct: 312 RWFGRQSRIIITTRDKGLLNSCGVKTIYDVKCLDDKDSLQMFKQIAFEGGSPPSVDFEQL 371

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGR--SKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           + +A + A G+P AL+    +L GR  S E WE A+  LE  P   I E+LKISY+ L  
Sbjct: 372 SIRAARLAHGLPSALQAYALFLRGRANSPEEWEEAVCGLESTPDENIMEILKISYEGLAK 431

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
           + +N FL +AC   G+    V S+ D             A KSLIN+     + +H L+ 
Sbjct: 432 AHQNAFLHVACLFNGDTFRRVTSLLDVSRMESNLWMRVLAEKSLINITSNGYVTLHKLVE 491

Query: 421 DMGREIVRKES--INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
            MGREI+      I  P             + +    G    E ISL + ++     M +
Sbjct: 492 QMGREIMLASGKFIGDP-------------ETIHDTLGMGQTESISLHICEMTCAFSMAT 538

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRH-----LEWPQCPLK--TLNICAEK 531
             FS+M KLRFL+ Y   N+   S L+ +P  E        L W   PL    L      
Sbjct: 539 GVFSRMYKLRFLKVYKHVNE-RESMLQVIPEDEYPSINCLLLHWDAFPLSKFPLRFNTYC 597

Query: 532 LVSLKMPCTKVEQLWDDV-QRLPSSLCTFKTPITF------EIIDCKMLERLPD---ELE 581
           LV L +  + +E LW  V Q   S+     TP  F      ++   K L++LPD     E
Sbjct: 598 LVELNLRHSNLETLWSGVLQCAISNYSLVSTPQKFGHLRKLDVTGSKNLKQLPDLSCAEE 657

Query: 582 NLEYLTVKGTTIRELPESLGRLSWVKRLILS----NNSNLERIPESIRHLSKLTFLFISH 637
             E L  +   ++ +PES+   S + RL LS      + +  + + +    ++T LF + 
Sbjct: 658 LDELLLEQCKRLKGIPESIAERSTLGRLNLSYYGGAKNPMGVVIQKVSQTQRITLLFPTS 717

Query: 638 CERLQTL 644
              +Q +
Sbjct: 718 SVEMQLM 724



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           ++ L + L     +  L LS++ + +++P SIR L+ L  L +++C++L++L ELP +L 
Sbjct: 910 VKSLSDQLSHFPKLAYLDLSSH-DFKKLPSSIRDLTSLVTLCLNNCKKLKSLEELPLSLQ 968

Query: 653 LLSARNCTSLE 663
            L A+ C SLE
Sbjct: 969 FLDAKGCDSLE 979



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 12/108 (11%)

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           E LE L + G     LPE + RLS +K L L N S L+ +PE    L+++  L +S+C+ 
Sbjct: 825 EFLENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPE----LTQVQSLTLSNCKN 880

Query: 641 LQTLPEL------PCNLGLLS--ARNCTSLEKLPAGLSSMSSVLYVNL 680
           L++L ++      P    LL     NC +++ L   LS    + Y++L
Sbjct: 881 LRSLVKISDASQDPSLYSLLELCLDNCKNVKSLSDQLSHFPKLAYLDL 928


>gi|224145723|ref|XP_002325744.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862619|gb|EEF00126.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 188/517 (36%), Positives = 267/517 (51%), Gaps = 69/517 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  F  HL++ L    I TF DD+ L  G+ ISQ L   I+ S I+I+
Sbjct: 1   YHVFLSFRGADTRKTFLGHLYNALVQAGIHTFKDDEELPPGEEISQQLKKAIQESKISIV 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR-KR 98
           +FS  YASSRW                      F  VDPSHVRKQ  SF + F     K 
Sbjct: 61  VFSRDYASSRWCLNELVEILECRNTKGRTVFPIFCGVDPSHVRKQEGSFKKAFKAYENKE 120

Query: 99  FPEKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             EK+ +WKNAL +AA+LSG D  S     ES LI++I  DVL +LD    +  K LVG+
Sbjct: 121 EKEKINKWKNALKDAANLSGKDIYSTANGDESVLIKKIVKDVLNKLDIKNLNIPKYLVGI 180

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +++I   L   S+ V  + I G+ G+ K TIA  V+ K+ + F+GS F  +V E  +
Sbjct: 181 DSCVDDIIKSLN-ASDDVSMVGIRGMLGMGKTTIAKVVYQKLFQKFDGSCFLFDVNEKSK 239

Query: 217 TGGIK-DLQKKLLSE-----LSKDGNMRNIESQL----NRLARKKVRIVFDDV------- 259
               K +LQK+L+ E     + K   + +++S +    + L  KK+ +V D +       
Sbjct: 240 GPDSKVELQKQLIRETLGVNILKRKKISDVDSGISLIKDLLGNKKILLVLDGMDQPQQLE 299

Query: 260 --------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS++IITT ++++L     +KK+ ++E        LF   AF G   +  
Sbjct: 300 TFGDRSVFAKGSKIIITTTNEKLLAQLKVDKKHSVEEWDEEMCLDLFNFHAFEGKTPEEE 359

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             EL+   ++ +  +P AL VLG      S ++ WE  + +L   P  +I   LK SYDS
Sbjct: 360 LAELSKVVVEQSGKLPSALVVLGNRFSQISERDEWEKEIYELRKFPD-QIHSKLKGSYDS 418

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA----------------SKSLINLDLFYRIR 414
           L+D  K++FLDIACF  GE  D V SI                    +SLI +D    I 
Sbjct: 419 LEDDLKSIFLDIACFFVGEDADFVASILGGRYGYCNNLRSRIQSLEERSLITIDFDDTIM 478

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
           M+DL++ MGREIVR+ S  +PGK +R+W H+D   VL
Sbjct: 479 MNDLVQKMGREIVRQTSHKYPGKHSRIWDHEDALDVL 515


>gi|297818930|ref|XP_002877348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297323186|gb|EFH53607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 982

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 230/745 (30%), Positives = 358/745 (48%), Gaps = 124/745 (16%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G+D R +F SH+      K I  FID+++ RG++I   L+  I  S IA+++
Sbjct: 52  HQVFPSFHGQDVRVDFLSHIQKEFRRKGIIPFIDNEIRRGESIGPELIKAIRESKIAVVL 111

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
           FS  Y SS+W                      FY+VDPS+V+K +  FG  F +    + 
Sbjct: 112 FSRNYGSSKWCLDELVEIMKCREEFGQTVIPIFYKVDPSNVKKLTGDFGSVFRNTCAGKT 171

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLD-ATFQSKNKGLVGVEC 158
            E + RW+ AL + A ++G+DS+    E+ +IE+I  D+L  L+ +T  S     VG+  
Sbjct: 172 KEVIGRWRQALAKLATIAGYDSHNWYNEAAMIEKIVIDILNMLNNSTPSSDFDSFVGMRA 231

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E +ES LC+ S+ V  + IWG  GI                    Y   N        
Sbjct: 232 HMENLESKLCLDSDEVRMVGIWGPPGIGV----------------AQYMLQN-------- 267

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNC 278
                 KK++  L  D   R+I   L+ +A K++R        GSR+IITT+DK++LK  
Sbjct: 268 ------KKVIVVL--DNIDRSI--YLDAIA-KEIRWF----GPGSRIIITTQDKKLLKEY 312

Query: 279 WANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLC 338
             N  Y++      +A ++FC +AF          EL  K       +PL L+V+G Y  
Sbjct: 313 GINHIYKVDYPSPYEACQIFCMYAFDQKFPKEDFEELAWKVTLRLGQLPLGLRVMGSYFR 372

Query: 339 GRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF 398
           G SK+ W + + +            LK S + L+      FLD+      +H   ++   
Sbjct: 373 GMSKQEWTNTLPR------------LKESTEILEAILAKDFLDV------KHIHHIL--- 411

Query: 399 DASKSLINLDLFYRIRMHDLLRDMGREIVRKE----SINHPGKRNRLWHHKDIYQVLKKN 454
            A KS I  D   RI MH+LL  +GREIVR+E    SI  PG+R  L   KD+  VL  +
Sbjct: 412 -AEKSFIFSD-DERIEMHNLLVQLGREIVRRELGQRSIREPGQRQFLVDAKDVCDVLTDD 469

Query: 455 T-GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF---YGDKNKCMVSHLEGVPFA 510
           T G+  + GI L+++ +  ++++   AF++M  L+FLRF   YGD++  +    +G+ + 
Sbjct: 470 TAGSRNVLGIDLNLSDIEDKLNVCEGAFNRMSNLKFLRFHYAYGDQSDKLYLP-QGLKYL 528

Query: 511 --EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD-----------------DV 549
             ++R LEW + PL  L  N   E LV LKM   K+ +LW+                 D+
Sbjct: 529 SRKLRLLEWERFPLTCLPSNFHTEYLVKLKMRYNKLHKLWESNRPLRNLKWIDFSYSKDL 588

Query: 550 QRLPSSLCTFKTPITFEIIDCKMLERLPDELE---NLEYLTVKG-TTIRELPESLGRLSW 605
           ++LP  L T        + +C  L  L   +E   NL+ L + G +++  LP S+   + 
Sbjct: 589 KKLP-DLSTATNLREVVLTECSSLVELLFSIENVINLQRLILFGCSSLVMLPSSIENATN 647

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSL 662
           +  L L   S+L  +P S+ + + L  L++  C  L  LP       NL LLS   CT L
Sbjct: 648 LLHLSLVGCSSLVELPNSLGNFTNLKNLYLDRCTGLVELPYSIGNATNLYLLSLDMCTGL 707

Query: 663 EKLPAGLSSMSSVLYVNLCNFLKLD 687
            KLP+ + ++  +LY+ L   LKL+
Sbjct: 708 VKLPS-IGNLHKLLYLTLKGCLKLE 731



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 30/176 (17%)

Query: 565 FEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            ++IDC  L+  P+   N++YL +KGT ++E+P S+   S +  L +S + NL+  P + 
Sbjct: 745 LDLIDCSRLKLFPEISTNIKYLELKGTAVKEVPLSIKSWSRLDCLEMSYSENLKNYPHA- 803

Query: 625 RHLSKLTFLFISHCERLQTLPELPCNLGL--LSARNCTSLEKLPAGLSSMSSVLYVNLCN 682
             L  +T L++ + E  +  P +  N  L  L    C  L               V+  N
Sbjct: 804 --LDIITTLYLDNTEVQEIHPWVKRNYRLWGLMLDKCKKLR------------FSVDFTN 849

Query: 683 FLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLK 737
            LKL+      I++               K  + PG E+P +F +++  GSS T+K
Sbjct: 850 CLKLNKEARELIIQTS------------SKRAFLPGREVPAYFTYRATNGSSMTVK 893


>gi|351720806|ref|NP_001235397.1| L33 protein [Glycine max]
 gi|12056930|gb|AAG48133.1|AF322633_1 putative resistance protein [Glycine max]
          Length = 522

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 181/515 (35%), Positives = 275/515 (53%), Gaps = 73/515 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQS---LLGTIEASCIA 58
           +DVFLSFRGEDTR  F  +L+  L+ K   TF  ++L+RG+ I+ S   +   I+ S + 
Sbjct: 16  FDVFLSFRGEDTRLGFVGNLYKALTEKGFHTFFREKLVRGEEIAASPSVVEKAIQHSRVF 75

Query: 59  IIIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK 97
           +++FS+ YASS                        FY VDPS V  Q+  +G   +   K
Sbjct: 76  VVVFSQNYASSTRCLEELLSILRFSQDNRRPVLPVFYYVDPSDVGLQTGMYGEALAMHEK 135

Query: 98  RF---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
           RF    +K+ +W+ AL EAA LSG+   +    E +LIE+I   V K+++          
Sbjct: 136 RFNSESDKVMKWRKALCEAAALSGWPFKHGDGYEYELIEKIVEGVSKKINRP-------- 187

Query: 154 VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           VG++  + E+  LL   S  GV  + I+G+GGI K T+A A+++ ++  F+   F   VR
Sbjct: 188 VGLQYRMLELNGLLDAASLSGVHLIGIYGVGGIGKTTLARALYDSVAVQFDALCFLDEVR 247

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS----- 261
           E     G+  LQ+ +L+E   + ++R       I     RL  K+V +V DD+       
Sbjct: 248 ENAMKHGLVHLQQTILAETVGEKDIRLPSVKQGITLLKQRLQEKRVLLVLDDINESEQLK 307

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRD+Q+L++    K Y ++ L   +A +L C  AF  D +  
Sbjct: 308 ALVGSPGWFGPGSRVIITTRDRQLLESHGVEKIYEVENLADGEALELLCWKAFKTDKVYP 367

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             I    +A+ YA G+PLAL+V+G  L GR    W+  +   E I   +I+++LKIS+D+
Sbjct: 368 DFINKIYRALTYASGLPLALEVIGSNLFGREIVEWQYTLDLYEKIHDKDIQKILKISFDA 427

Query: 371 LDDSQKNVFLDIACFLE------------GEHRDEVISIFDA--SKSLINLDLFYRIRMH 416
           LD+ +K++FLDIACF +            G + D + +I D    K+LI +D   R++MH
Sbjct: 428 LDEHEKDLFLDIACFFKGCKLAQVESIVSGRYGDSLKAIIDVLLEKTLIKIDEHGRVKMH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
           DL++ MGREIVR+ES  HPG  +RLW  +D+  VL
Sbjct: 488 DLIQQMGREIVRQESPKHPGNCSRLWSPEDVADVL 522


>gi|13517483|gb|AAK28812.1|AF310968_1 resistance-like protein PH-B [Linum usitatissimum]
          Length = 1202

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 224/769 (29%), Positives = 355/769 (46%), Gaps = 158/769 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG DTR  FTSHL   LS K I+TFID +L + ++I + L+  ++   +++++
Sbjct: 21  YDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESIDE-LISILQRCALSVVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR---LRK 97
           FSE++A S W                      FY+VDP  V  +  S+     R    R 
Sbjct: 79  FSEKFADSVWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDEPRSYMATIDREYKARS 138

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGV 156
            F E  KRW +A+   A+ +G  S  I+ ES+LI+ +   V K+L     S N+  LV +
Sbjct: 139 SFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAM 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE 213
              I EIE LL +   +  C + +WG+GG+ K T+A A +++++   +G    F  NV E
Sbjct: 199 SSRIFEIERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNE 258

Query: 214 -AEETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV--------- 259
             E+  G++ +  KL S+L  + N+     NI  +  RL+  +V +V D+V         
Sbjct: 259 ICEKHHGVEKIVHKLYSKLLDENNIDREDLNIAYRRERLSHLRVFVVLDNVETLEQLEQL 318

Query: 260 ------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                        +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D 
Sbjct: 319 ALGYVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDEESTRLFSLHAFKQDR 377

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              + +  +  A  Y +G PLALK+LG  L G     W S +  L    ++ +E +L+ S
Sbjct: 378 PQDNWMGKSRLATSYCKGNPLALKILGGALFGEDVHYWRSLLTGLRQSGNLGMETILRRS 437

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY-------- 411
           YD L   +K +FLD+AC L G  +  +I    +++ +S    K LI+  L          
Sbjct: 438 YDKLGKEEKKIFLDVACLLNGMSKSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSENGE 497

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI------- 460
            I +H LL++M   IV++E     GKR+RL    D++++L     KN  T  +       
Sbjct: 498 MIEVHGLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIV 555

Query: 461 ----------------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
                                       EGI LD++K  +E+++ + AF  M  L FL+F
Sbjct: 556 MVIPKRKKRKVTDMHQKGDDPLEEHRTTEGIRLDLSKT-KEMYLKANAFEGMNSLTFLKF 614

Query: 493 ---------YGDKNKCMVSH-----LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
                    Y  KN  M  H     L  +P   +R L+W   P K+L      + LV L 
Sbjct: 615 ESPEIEYPYYRLKNVKMKIHLPYDGLNSLPEG-LRWLQWDGYPSKSLPAKFYPQHLVHLI 673

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           +  + + + W+   +           I  ++  C  +  +PD   +L             
Sbjct: 674 IRRSPIRRCWEGYDQ-----PQLVNLIVLDLCYCANIIAIPDISSSLN------------ 716

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                    ++ L+L    +L  +P  +++L+KL  L ISHCE L+ LP
Sbjct: 717 ---------IEELLLFGCKSLVEVPFHVQYLTKLVTLDISHCENLKPLP 756



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 21/213 (9%)

Query: 543  EQLWDDVQRLPSSLCTFKTPI----TFEIIDCKMLERLPDELENLEYL---TVKGTTIRE 595
            EQLW     L  SL     P+    +  +  C+ L  +P  + NL  L    +  T I+ 
Sbjct: 874  EQLWIGWSPLIESLPEISEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSETGIKS 933

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            LP S+  L  +  + L    +LE IP SI  LSKL    +S CE + +LPELP NL  L 
Sbjct: 934  LPSSIQELRQLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELD 993

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSL--YEERGI 710
               C SL+ LP   S+   +LY+N  +F    +LD    +E V +  +  SL    +R +
Sbjct: 994  VSRCKSLQALP---SNTCKLLYLNTIHFEGCPQLDQAIPAEFVANFLVHASLSPSHDRQV 1050

Query: 711  KKSMYFPGNEIPKWFRHQSMGSS--ATLKTRPP 741
            + S    G+E+P+WF ++SM     +T+K   P
Sbjct: 1051 RCS----GSELPEWFSYRSMEDEDCSTVKVELP 1079


>gi|227438149|gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 224/737 (30%), Positives = 345/737 (46%), Gaps = 128/737 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG D R+ F SHL+  L    I TF DD+ L +G++IS  L   IE S I ++
Sbjct: 14  YDVFLSFRGPDVRNGFLSHLYQSLVTSGIYTFKDDEELEKGESISPELRKAIENSKIHLV 73

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + SE YASS W                       FY+++PSHVR+QS  FG  F + R R
Sbjct: 74  VLSESYASSSWCLDELVHMMRRLKNNPGHLVFPVFYKIEPSHVRRQSGPFGESFHKHRSR 133

Query: 99  FPE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
             E K+K+W+ ALT  A+L G+ S+    +++L++++  D+L+ L +++       VG+ 
Sbjct: 134 HRESKLKQWRKALTSIANLKGYHSSNGDNDAELVDQLTRDILRVLPSSYLHLPTYAVGIR 193

Query: 158 CSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EE 216
             +  I+ L+C G + V  + IWG+ GI                  G  F  N R+  + 
Sbjct: 194 PRVGRIKELMCFGLDDVQIIGIWGMAGI------------------GRSFLENFRDYFKR 235

Query: 217 TGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLK 276
             G   LQKKLLS++     +R  E+  N +                           +K
Sbjct: 236 PDGKLHLQKKLLSDI-----LRKDEAAFNNM------------------------DHAVK 266

Query: 277 NCWANKKYRM--KELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
             + NK+  +  KEL   +A  L    AF         ++   + ++Y  G+PLA++VLG
Sbjct: 267 QRFRNKRSSLTPKELNADEALDLVSWHAFRSSEPPEEFLQFPKRLVEYCGGLPLAMEVLG 326

Query: 335 CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEV 394
            +L  RS   W+S ++ L+ IP   I+  L+IS+D+L+  QK++FLDI+CF  G  +D V
Sbjct: 327 AFLYKRSVSEWKSTLKALKRIPDDNIQAKLQISFDALNALQKDIFLDISCFFIGMDKDYV 386

Query: 395 ISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR--- 438
             I D               + LI +    R+ MHDLLRDMGR IV+  S  H   R   
Sbjct: 387 DCILDGCELEPVAGLKVLKERCLITIH-DNRLMMHDLLRDMGRYIVQGTSKKHVKNRVKW 445

Query: 439 NRLWHHKDIYQVLKKNTGTE------AIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
           +RLW    +  VL+  +GT+      AIEG+SL       E ++   AFS + +LR L+ 
Sbjct: 446 SRLWDRVHVIDVLENYSGTDANHPNHAIEGLSLKAEVTAVE-NLEVKAFSNLRRLRLLQL 504

Query: 493 YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT--LNICAEKLVSLKMPCTKVEQLWDDVQ 550
               +  +    E  P   +R L W   P ++  +N+    LV + M  + +++LWD   
Sbjct: 505 ---SHVVLNGSYENFPKG-LRWLCWLGFPEESIPINLHLRSLVVMDMQNSNLKRLWDQKP 560

Query: 551 R----------LPSSLCTFKTPI--------TFEIIDCKMLERLPDELENLE----YLTV 588
                      L  S+   +TP            +I+C+ L ++ + ++ L+     L +
Sbjct: 561 HDSLKELKYLDLSHSIQLTETPDFSYLPNLEKLFLINCQRLAKVHESIKVLQGSLILLNL 620

Query: 589 KG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL 647
            G   + ELP  L  L  ++ LILS  S LER+ +++  L  LT L   +    Q +P  
Sbjct: 621 SGCIKLGELPLELYTLKLLETLILSGCSQLERLDDALGELESLTILKADYTAITQ-IPSS 679

Query: 648 PCNLGLLSARNCTSLEK 664
              L  LS   C  L K
Sbjct: 680 SDQLKELSLHGCKELWK 696



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 37/188 (19%)

Query: 596 LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
           +P +LG LS ++ L L  N N   +      L  L  L + +C  L+++  LP  L  L 
Sbjct: 738 VPVNLGSLSSLEELDLQGN-NFRNLQTDFAGLPSLQILKLDNCSELRSMFSLPKKLRSLY 796

Query: 656 ARNCTSLEKLP----------------------AGLSSMSS--VLYVNLCNFLKLDPNEL 691
           ARNCT LE+ P                       GL  + +  V+++ +CN +   P   
Sbjct: 797 ARNCTVLERTPDLKECSVLQSLHLTNCYNLVETPGLEELKTVGVIHMEMCNNV---PYSD 853

Query: 692 SEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLIS 751
            E +  GW         G    ++ PG+ IP W   ++   S +     P P   + L+ 
Sbjct: 854 RERIMQGWAV-------GANGGVFVPGSTIPDWVNFKNGTRSISFTV--PEPTLNSVLVG 904

Query: 752 FAFCAVVV 759
           F      V
Sbjct: 905 FTVWTTYV 912


>gi|13517469|gb|AAK28806.1|AF310960_2 P2 rust resistance protein [Linum usitatissimum]
          Length = 1211

 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 226/780 (28%), Positives = 356/780 (45%), Gaps = 180/780 (23%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG DTR  FTSHL   LS K I+TFID +L + ++I + L+  ++   +++++
Sbjct: 21  YDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESIDE-LISILQRCALSVVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR---LRK 97
           FSE++A S W                      FY+VDP  V  +  S+     R    R 
Sbjct: 79  FSEKFADSEWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDEPRSYMATIDREYKARS 138

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGV 156
            F E  KRW +A+   A+ +G  S  I+ ES+LI+ +   V K+L     S N+  LV +
Sbjct: 139 SFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAM 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE 213
              I EIE LL +   +  C + +WG+GG+ K T+A A + +++   +G    F  NV E
Sbjct: 199 GSRIFEIERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYERVTSSNKGIKHLFVRNVNE 258

Query: 214 -AEETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV--------- 259
             E+  G++ +  KL S+L  + N+     NI  +  RL+R +V +V D+V         
Sbjct: 259 ICEKHHGVEKIVHKLYSKLLDENNIDREDLNIGYRRERLSRSRVFVVLDNVETLEQLEQL 318

Query: 260 ------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                        +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D 
Sbjct: 319 ALGYVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNNKESIRLFSLHAFKQDR 377

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              +  + +  AI Y +G PLALK+LG  L G     W S +  L    ++ IE +L+ S
Sbjct: 378 PQDNWTDKSHLAISYCKGNPLALKILGGALFGEDVHYWRSLLTGLRQSGNLGIESILRRS 437

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY-------- 411
           YD L   +K +F+D+AC L G  R  +I    +++ +S    K LI+  L          
Sbjct: 438 YDKLGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKDLIDKSLLTCVPSENGE 497

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI------- 460
            I +HDLL++M   IV++E     GKR+RL    D++++L     KN  T  +       
Sbjct: 498 MIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIV 555

Query: 461 ----------------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
                                       EGI LD++   +E+++ + AF  M  L FL+F
Sbjct: 556 MVIPRRKRRKVTDMHERGYDPLEEHRTTEGICLDLSGT-KEMYLKANAFEGMNSLTFLKF 614

Query: 493 YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRL 552
              +                  L++PQ PLK +              TK+   +D +  L
Sbjct: 615 KSPE------------------LDYPQYPLKNVK-------------TKIHLPYDGLNSL 643

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
           P  L   +        D    + LP +   ++L +L ++G+ IR   E   +   V  ++
Sbjct: 644 PEGLRWLQW-------DGYPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIV 696

Query: 611 LSNN--SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLP 645
           L     +NL  IP+                        +++L+KL  L IS C+ L+ LP
Sbjct: 697 LDLRYCTNLIAIPDISSSLNLEELLLFGCRSLVEVPFHVQYLTKLVTLDISFCKNLKRLP 756



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LP       T  +  +  C+ L  +P  + NL  L    +  T I+ LP S+  L  
Sbjct: 895  IESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQ 954

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L +  +LE IP SI  LSKL    +  CE + +LPELP NL  L  R+C SL+ L
Sbjct: 955  LHSICLRDCKSLESIPNSIHKLSKLGTFSMYGCESIPSLPELPPNLKELEVRDCKSLQAL 1014

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   +LY+N   F    ++D    +E + +  +  SL    ER ++ S    G+E
Sbjct: 1015 P---SNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHASLSPSYERQVRCS----GSE 1067

Query: 721  IPKWFRHQSMGSS--ATLKTRPP 741
            +PKWF ++SM     +T+K   P
Sbjct: 1068 LPKWFSYRSMEDEDCSTVKVELP 1090


>gi|5903075|gb|AAD55633.1|AC008017_6 Similar to downy mildew resistance protein RPP5 [Arabidopsis
           thaliana]
          Length = 1258

 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 227/709 (32%), Positives = 336/709 (47%), Gaps = 143/709 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR N  SHLH  L  K + TF DD+ +  GD+IS+ +   I+ S  A++
Sbjct: 12  YDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR-KR 98
           I SE YASS W                      FY VDPSHVR Q+ SF   F + +  +
Sbjct: 72  ILSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQTGSFT--FDKYQDSK 129

Query: 99  FPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
            P K+  W+ ALT+ A L+G D      E+ +IEEI  D+ K+L          +VG+  
Sbjct: 130 MPNKVTTWREALTQIASLAGKDFETCEDEASMIEEIVKDISKKLLIMQPVDFSDIVGMNA 189

Query: 159 SIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
            +E +  LL + SE  V  + IWG+GGI K TIA  +F++ S+ F    F  NV +    
Sbjct: 190 HMERLSPLLSMDSENEVRMIGIWGMGGIGKTTIAKCLFDQFSQGFPARCFLENVSKIYRK 249

Query: 218 GGIKDLQKKLLSE---LSKDGNMRNIESQLN------RLARKKVRIVFDDVTS------- 261
           GG+  L +K LS    LSK   M+    +L       R   +KV +V D+V         
Sbjct: 250 GGVSSLAEKFLSTTLGLSKK-KMKGSGVKLGPQEIKARFGCRKVFVVLDNVDDMRQMHAF 308

Query: 262 ---------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSR+IITTRDK +L        Y +K +    A +LF Q AF G  L  S 
Sbjct: 309 AQESSWFGPGSRIIITTRDKGLLNTYGVRTVYEVKCMDNDAALQLFNQLAFKG-ALPPSE 367

Query: 313 I--ELTDKAIKYAQGVPLALKVLGCYL-CGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
           +  +L+ +A   AQG+P+A++  G +     S + W+ A+ +    P   + E+LKISYD
Sbjct: 368 LYEKLSIRASWLAQGLPVAIEAYGLFFRRMTSLKEWDDALCRFIEAPDESVMEILKISYD 427

Query: 370 SLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMH 416
            L+++ KNVFL +AC   GE      ++ D             A KSLI +     I+MH
Sbjct: 428 GLEETDKNVFLHVACLFNGEPLRRATTLLDDGVLQGCLGLKILAEKSLIEITASGYIKMH 487

Query: 417 DLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHM 476
           +L+    R IV +ES+     R  LW+  +IY++LK+NT  + +E I      ++R    
Sbjct: 488 NLVDQTARAIVNQESMQRRHGRGVLWNPYEIYELLKRNTPQDLVEII------LHRS--- 538

Query: 477 NSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLK 536
           N  +F K   ++ L      N+ M                     L T+ +    ++++ 
Sbjct: 539 NLTSFWKETVVKAL------NRSM---------------------LITMYLLVLNILAIF 571

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTTIR 594
           +   +  Q   +++RL             ++ D + LE+LPD     NLE L  +G    
Sbjct: 572 LFFVEYAQGMPNLRRL-------------DLSDSENLEQLPDLSMAVNLEELITQG---- 614

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
                       KR        L++IPESI +L++LT L +S+CE L +
Sbjct: 615 -----------CKR--------LKKIPESISYLTRLTTLDVSYCEELAS 644



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 21/277 (7%)

Query: 592  TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            +IR + + L     +  L LS++   E++P SI  LS L  L ++ C++L+++  LP  L
Sbjct: 944  SIRSILDQLRHFIKLSYLDLSSH-EFEKLPSSIEVLSSLRTLCLNKCKKLKSIEGLPLCL 1002

Query: 652  GLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIK 711
              L A  C  LE +   L+     L ++ C  LK D + +++ + +G  +    E  G  
Sbjct: 1003 KSLYAHGCEILETVSLPLNHSVKHLDLSHCFGLKRDEHLIAQFLNEGENEE---ESLGFA 1059

Query: 712  KSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV----FPAFLKYF 767
               +FPG E+P +F H   G S T+    P+     KL+ F  C V+     F      F
Sbjct: 1060 ---FFPGTEVPSYFDHIDKGKSLTIDL--PQIWPSPKLLGFDACVVIACERPFDIQFSPF 1114

Query: 768  RHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNY 827
             +     DWD       C + +            +   V+SDH+ +     G + F    
Sbjct: 1115 SY-----DWDWGYERYFCLYLKPDFHSTDPSTEDEEEVVKSDHLLI---IRGLKNFSNQI 1166

Query: 828  DEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
            ++   +    F         +++ CGI  ++    AD
Sbjct: 1167 NKLGIKSDLQFSEELKSPSAKLQSCGIRLIWEVGQAD 1203


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 227/812 (27%), Positives = 368/812 (45%), Gaps = 146/812 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SF G D R  F SH+      K I  FID+ + R  +I   L+  I  S IAI++
Sbjct: 53  HQVFPSFHGADVRKTFLSHVLEAFRGKGIDPFIDNSIERSKSIGPELVEAIRGSRIAIVL 112

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S  YASS W                      FY VDP+H++KQ+  FG+ F    K + 
Sbjct: 113 LSRNYASSSWCMNELVEIMKCKEDLGQIVITIFYEVDPTHIKKQTGDFGKVFKETCKGKT 172

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            E++KRW+ AL   A ++G+ S+                    +  F++    L+G+   
Sbjct: 173 KEEIKRWRKALEGVATIAGYHSS--------------------NWDFEA----LIGMGAH 208

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E + +LL +  + V  + IWG  GI K TIA  + +++S+ F+ S   +N++E   +  
Sbjct: 209 MENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECYPSPC 268

Query: 220 IKD------LQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS---------- 261
           + +      LQ K+LS++   KD  + ++     RL  KKV +V DDV            
Sbjct: 269 LDEYSVQLQLQNKMLSKMINQKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDALAKE 328

Query: 262 ------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                 GSR+IITT + ++L     N  Y+++     +A ++FC  AFG  H      EL
Sbjct: 329 TRWFGPGSRIIITTENLRLLMAHRINHIYKVEFSSTDEAFQIFCMHAFGQKHPYNGFYEL 388

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
           + +  + A G+PL LKV+G  L G SK+ W+  + +L      +IE +L  SY++L    
Sbjct: 389 SREVTELAGGLPLGLKVMGSSLRGMSKQEWKRTLPRLRTCLDGKIESILMFSYEALSHED 448

Query: 376 KNVFLDIACF--------LEGEHRDEVISIFD-----ASKSLINLDLFYRIRMHDLLRDM 422
           K++FL IACF        +E    D  + +       A KSLI++       MH LL  +
Sbjct: 449 KDLFLCIACFFNYQKIKKVEKHLADRFLDVRQGLYVLAEKSLIHIGT-GATEMHTLLVQL 507

Query: 423 GREIVRKESINHPGKRNRLWHHKDIYQVLKKNT--GTEAIEGISLDMNKVNREI-HMNSY 479
           GREI   +S N P K   L   ++I + L   T   +  I G+  D++K   E+ +++  
Sbjct: 508 GREIAHTQSTNDPRKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVTNISEK 567

Query: 480 AFSKMPKLRFLRFYG---------------DKNKC----MVSHLEGV--PFAEVRHLEWP 518
              +M  L+F+RF G                 N C     V+ L+ +   F E+R L W 
Sbjct: 568 GLQRMSNLQFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRLLHWI 627

Query: 519 Q----CPLKTLNICAEKLVSLKMPCTKVEQLWD-----------------DVQRLP--SS 555
                C   T N   E LV L MP +    LW+                  ++ LP  S+
Sbjct: 628 NFRRLCLPSTFN--PEFLVELNMPSSTCHTLWEGSKALRNLKWMDLSYSISLKELPDLST 685

Query: 556 LCTFKTPI----TFEIIDCKMLERLPDELE---NLEYLTVKGTTIRELPESLGRLSWVKR 608
               +  I    + ++ +C  L  LP  +    NL+ L +    + +LP S+ + + +K+
Sbjct: 686 ATNLEELILKYCSLDLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKK 745

Query: 609 LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEKL 665
            IL+  S+L  +P  + + + L  L + +C  L  LP       NL  L   NC+SL KL
Sbjct: 746 FILNGCSSLVELP-FMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKL 804

Query: 666 PAGLSSMSSVLYVNL--CNFLKLDPNELSEIV 695
           P+ + + +++  ++L  C+ L   P  +  + 
Sbjct: 805 PSFIGNATNLEILDLRKCSSLVEIPTSIGHVT 836



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 51/269 (18%)

Query: 522  LKTLNIC-AEKLVSLKMPCTKVEQLW-------DDVQRLPSSLCTFKTPITFEIIDCKML 573
            L+ LN+C    LV L      +  L+         ++ LPS++   K+    ++ DC   
Sbjct: 910  LQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNI-NLKSLERLDLTDCSQF 968

Query: 574  ERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES---------- 623
            +  P+   N+E L + GT + E+P S+   SW  RL + + S  E++ E           
Sbjct: 969  KSFPEISTNIECLYLDGTAVEEVPSSIK--SW-SRLTVLHMSYFEKLKEFSHVLDIITWL 1025

Query: 624  ------------IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSS 671
                        I+ +S+L  L +  C +L +LP+LP +L +++A  C SLE L    ++
Sbjct: 1026 EFGEDIQEVAPWIKEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCSYNN 1085

Query: 672  MSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQ-SM 730
              S+L  N     KL+      I+           +         PG E+P +F H+ + 
Sbjct: 1086 PLSLL--NFAKCFKLNQEARDFII-----------QIPTSNDAVLPGAEVPAYFTHRATT 1132

Query: 731  GSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            G+S T+K    RP   +  + F  C V++
Sbjct: 1133 GASLTIKLN-ERPISTS--MRFKACIVLI 1158



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 7/138 (5%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTV-KGTTIRELPESLGRLSWVK 607
           LPSS+         ++ +C  L +LP       NLE L + K +++ E+P S+G ++ + 
Sbjct: 780 LPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLW 839

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEK 664
           RL LS  S+L  +P S+ ++S+L  L + +C  L  LP       NL  L    C+SL +
Sbjct: 840 RLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVE 899

Query: 665 LPAGLSSMSSVLYVNLCN 682
           LP+ + +++++  +NLCN
Sbjct: 900 LPSSIGNITNLQELNLCN 917



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 7/144 (4%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVKG-TTIRELPESLGRLSWV 606
           +LPS +         ++  C  L  +P  +    NL  L + G +++ ELP S+G +S +
Sbjct: 803 KLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISEL 862

Query: 607 KRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP---CNLGLLSARNCTSLE 663
           + L L N SNL ++P S  H + L  L +S C  L  LP       NL  L+  NC++L 
Sbjct: 863 QVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLV 922

Query: 664 KLPAGLSSMSSVLYVNLCNFLKLD 687
           KLP+ + ++  +  ++L    KL+
Sbjct: 923 KLPSSIGNLHLLFTLSLARCQKLE 946



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)

Query: 532 LVSLKMPCTKVEQLW-------DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---E 581
           LV +      V  LW         +  LPSS+          + +C  L +LP       
Sbjct: 825 LVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHAT 884

Query: 582 NLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           NL  L + G +++ ELP S+G ++ ++ L L N SNL ++P SI +L  L  L ++ C++
Sbjct: 885 NLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQK 944

Query: 641 LQTLPELPCNLGL-----LSARNCTSLEKLPAGLSSMSSVLYVN 679
           L+ LP    N+ L     L   +C+  +  P  +S+    LY++
Sbjct: 945 LEALPS---NINLKSLERLDLTDCSQFKSFPE-ISTNIECLYLD 984



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 551 RLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVKG-TTIRELPESLGRLSWVK 607
           +LP S+  F     F +  C  L  LP      NL+ L +   +++ ELP S+G    ++
Sbjct: 732 KLPLSIVKFTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQ 791

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL---PCNLGLLSARNCTSLEK 664
            L LSN S+L ++P  I + + L  L +  C  L  +P       NL  L    C+SL +
Sbjct: 792 NLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVE 851

Query: 665 LPAGLSSMSSVLYVNLCN 682
           LP+ + ++S +  +NL N
Sbjct: 852 LPSSVGNISELQVLNLHN 869


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 239/837 (28%), Positives = 372/837 (44%), Gaps = 167/837 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VFL+FRG+  R+ F SHL   L    I  FID    +G ++S +L   I+ S IA+ I
Sbjct: 19  HQVFLNFRGKQLRNGFVSHLEKALRRDGINVFIDRNETKGRDLS-NLFSRIQESRIALAI 77

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF- 99
           FS  Y  S W                      FY VD   V+    +FG  F +L K   
Sbjct: 78  FSSMYTESYWCLDELVKIKDCVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFWKLAKTCN 137

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL--------------DAT 145
            EK+ +WK AL +     GF  + +  E + I +I  +V+K L              D  
Sbjct: 138 GEKLDKWKQALKDVPKKLGFTLSEMSDEGESINQIVGEVIKVLSSDVMPDLEREIPIDDP 197

Query: 146 FQSKNK----------GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVF 195
           F +  +           L G+E  ++++E  L    +    + + G+ GI K T+   ++
Sbjct: 198 FPTGEQVPEAAPDSPPPLFGIETRLKQLEEKLDFECKDTLTIGVVGMPGIGKTTLTSMLY 257

Query: 196 NKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR------NIESQLNRLAR 249
            K    F    F  +VR+  +   +   +   + EL KD N+       + ES    L  
Sbjct: 258 EKWQHDFLRCVFLHDVRKMWKDCMMD--RSIFIEELLKDDNVNQEVADFSPESLKALLLS 315

Query: 250 KKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYAD 293
           KK  +V D+V+                 GSR+ ITT D+ V++    +  Y +  L   D
Sbjct: 316 KKSLVVLDNVSDKKQIEVLLGESDWIKRGSRIFITTSDRSVIEG-MVDDTYEVLRLTGRD 374

Query: 294 AHKLFCQWAFGGDHLDA--SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRK 351
           + + F  +AF G       + + L+     YA+G PLALK+LG  L G+ K  WE  + K
Sbjct: 375 SFEYFSYFAFSGKLCPPVRTFMNLSRLFADYAKGNPLALKILGKELNGKDKTHWEEKLSK 434

Query: 352 LEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFL---------------EGEHRDEVIS 396
           L   P+  I++VL++SYD L  S K+VFLD+ACF                + E  D V  
Sbjct: 435 LMQSPNKTIQDVLRVSYDELGLSHKDVFLDVACFFRSGDEYYVRCLVESCDTEAIDTVSE 494

Query: 397 IFD-ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
           I D ASK LIN+    R+ MHDLL   G+E      +   G R RLW+HK +   LK   
Sbjct: 495 IKDLASKFLINIS-GGRVEMHDLLYTFGKE------LGSQGSR-RLWNHKAVVGALKNRV 546

Query: 456 GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDK--NKC----MVSHLEGV-- 507
           G  A+ GI LDM+++ +++ ++   F KM  LR+L+FY  +   +C     ++  EG+  
Sbjct: 547 G--AVRGIFLDMSELKKKLPLDRSTFIKMRNLRYLKFYSSRCDRECEADSKLNFPEGLEF 604

Query: 508 PFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD---DVQRL-------PSS 555
           P  E+R+L W + PL  L  +   + L    +P +++E+LW+   D Q+L          
Sbjct: 605 PLDEIRYLYWLKFPLMKLPKDFNPKNLTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRK 664

Query: 556 LCTFKTPITFEIID------CKMLERLPDELENLE---YLTVKG-TTIRELPESLGRLSW 605
           LC     +  E +       C  LE LP E++ ++   +L ++G T++R LP     L  
Sbjct: 665 LCNLSGLLNAESLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLPRM--NLIS 722

Query: 606 VKRLILSNNSNLE--------------------RIPESIRHLSKLTFLFISHCERLQTLP 645
           +K LIL+N S+++                    ++P  +  L KL  L +  C+ L  +P
Sbjct: 723 LKTLILTNCSSIQKFQVISDNLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVP 782

Query: 646 ELPCNLGLLSA------RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
           E    LG L A        C+ L+     + +M  +        L LD   L E+ K
Sbjct: 783 EF---LGKLKALQELVLSGCSKLKTFSVPIETMKCL------QILLLDGTALKEMPK 830



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 164/381 (43%), Gaps = 82/381 (21%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---------------------------ELE 581
            + +LP+ +   +  I   + DCKML  +P+                            ++
Sbjct: 754  IGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLKTFSVPIETMK 813

Query: 582  NLEYLTVKGTTIRELPE-----------------SLGRLSWVKRLILSNNSNLERIPESI 624
             L+ L + GT ++E+P+                  +  LS ++RL LS N+ +  +   I
Sbjct: 814  CLQILLLDGTALKEMPKLLRFNSSRVEDLPELRRGINGLSSLRRLCLSRNNMISNLQIDI 873

Query: 625  RHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFL 684
              L  L +L + +C+ L ++P LP NL +L A  C  L+ + + ++ +  +  V    F+
Sbjct: 874  NQLYHLKWLDLKYCKNLTSIPLLPPNLEILDAHGCEKLKTVASPMALLKLMEQVQ-SKFI 932

Query: 685  KLDPNELSEIVKDGWMKHS----------LYEERGIKKSMY---FPGNEIPKWFRHQSMG 731
              + N L ++ K+    ++           Y+E G+ ++++   FPG+++P WF +Q+ G
Sbjct: 933  FTNCNNLEQVAKNSITSYAQRKSQLDARRCYKEGGVSEALFIACFPGSDVPSWFNYQTFG 992

Query: 732  SSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKS 791
            S+  LK  PP     N+L + A CAVV FP           +D+ +       C++K + 
Sbjct: 993  SALRLKL-PPHWCD-NRLSTIALCAVVTFP---------DTQDEINRFSIECTCEFKNEL 1041

Query: 792  EGHL-YSWFLG----KISYVESDHVFLGCNS-------FGGEYFGPNYDEFSFRIHCSFH 839
               + +S  LG    +   ++SDHVF+G  S         G      +D+       S  
Sbjct: 1042 GTCIRFSCTLGGSWIESRKIDSDHVFIGYTSSSHITKHLEGSLKLKEHDK-CVPTEASIE 1100

Query: 840  FPPYLERGEVKKCGIHFVYAQ 860
            F      GE+  CG+  VY +
Sbjct: 1101 FEVIDGAGEIVNCGLSLVYEE 1121


>gi|242276423|gb|ACS91453.1| M3 [Linum usitatissimum]
          Length = 1293

 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 182/586 (31%), Positives = 288/586 (49%), Gaps = 76/586 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR   T  L+  L    I TF  DD+L +G+ I  +LL  I  S I + 
Sbjct: 61  YEVFLSFRGPDTRYQITDILYRFLCRTKIHTFRDDDELRKGEEIGSNLLRAIYQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA+S+W                       FY VDP  VR Q+  + + F     +
Sbjct: 121 IISRGYANSKWCLMELAEIVRYQELDTRRIIFPIFYMVDPKDVRHQTGHYRKAFQEHATK 180

Query: 99  FPE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           + E  ++ WKNAL +   L G+       ++ + +E++ ++   +    F  +   LVG+
Sbjct: 181 YDEMTIQNWKNALNKVGTLKGWHVKNNDEQAAIADEVSANIWSHISKENFILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +E I   L + S+ V  + ++G+GGI K T A AV+NKIS HF+   F  NVR  +E
Sbjct: 241 DDHVEVILETLNLDSKSVTMVGLYGMGGIGKTTTAKAVYNKISSHFDRCCFVDNVRAMQE 300

Query: 217 T-GGIKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDVTS------ 261
              GI +LQKKL+SE+        + D   R +  +  R+++ K+ +V DDV        
Sbjct: 301 QKDGIFNLQKKLVSEILRMDSVGFTNDSGGRKMIKE--RVSKSKILVVLDDVDEKFKFED 358

Query: 262 ----------GSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDHLD 309
                     G+R IIT+R++ VL +   N  K Y +  +   D+ +LF + AF  +   
Sbjct: 359 ILGCPNDFDYGTRFIITSRNQNVLSHLNENQCKLYEVGSMSQPDSLELFSKHAFKKNTPP 418

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKISY 368
           + +  L ++ +    G+PL LKV G +L G+   VWE  + +L    ++ E+ + LKISY
Sbjct: 419 SDYETLANEIVSTTGGLPLTLKVTGSFLFGQEIGVWEDTLEQLRKTLNLDEVYDRLKISY 478

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRIRM 415
           D+L    K +FLDIACF  G ++++                IF   + +I +      +M
Sbjct: 479 DALKVEAKEIFLDIACFFIGRNKEQPYYMWSDCNLYPKSNIIFLIQRCMIQVGDDGVFQM 538

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIH 475
           HD LRDMGREIVR+E +  P KR+R+W  ++   +L K  G+  ++ IS+  + V  E  
Sbjct: 539 HDQLRDMGREIVRREDVERPWKRSRIWSSEEGIDLLLKKKGSSKVKAISIPESGVKYE-- 596

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP 521
             S  F  + +LR   F+   N  +      +    + +L+W   P
Sbjct: 597 FKSECFLNLSELRL--FFVGANTLLTGDFNNL----LPNLKWLHLP 636


>gi|13509236|emb|CAC35338.1| Nbi-D protein [Linum usitatissimum]
          Length = 1108

 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 225/758 (29%), Positives = 352/758 (46%), Gaps = 109/758 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y++FLSFRG D R  F  HL+  L     +TF D++ +R G  I  S++  I  S I I 
Sbjct: 31  YEIFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGTIGPSIIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I +  YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           +  +K  PE +  WK AL E   + G+          +I++I  +V   L A +      
Sbjct: 151 QHSQKHDPETVLEWKEALQEVGKMKGYHVTESDGHGSIIDKILTEVELHLGANYTLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSHVDEVVRLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REAE-ETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLLEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      ++ SR +ITTRD + L+     K + ++E+    +  LF + AFG D  
Sbjct: 331 FDDVLGKFENFSTDSRFLITTRDVRGLELLRECKMFELQEMSPDHSLTLFNKHAFGVDSP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+    + A G+PL +KV+G  L    K  WE  + +L+ I   +++E LKISY
Sbjct: 391 QEDYAILSKDFSQAAAGLPLYIKVIGSLLYRMDKIFWEEKLEELKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIAC-FLEGEHRDEVISIFD------------ASKSLINL-------- 407
           + L  +++ +FLDIAC F+E      ++   D              +SLI L        
Sbjct: 451 NELTHTERQIFLDIACYFIESFKIGPMLMWNDCDFYSESTIRSLTQRSLIKLQKPYIKGA 510

Query: 408 --DLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL 465
             D+F+   MHD +RD+GR IVR+E   +P KR+R+W +KD   +LK   GT+ +E + +
Sbjct: 511 DIDMFW---MHDHVRDLGRAIVREEKNQNPYKRSRIWSNKDAVDMLKHKKGTDWVEILEV 567

Query: 466 DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
           DM     +  +    F K+ +LR+L+     N  +    + V    +R L    C     
Sbjct: 568 DMK--FEDFMLTDKEFEKLTRLRYLKV---SNGRLAGDFKDV-LPNLRWLRLKSCDSIPT 621

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLP--------SSLCTFKTPITFEIIDCKMLERLP 577
            +  +KLV+L++    V   W     L         S    F      +  DC+ LE L 
Sbjct: 622 GLYLKKLVTLQLVDCSVRDGWKGWNELKVARKLKAVSLKRCFHLKKVPDFSDCEDLECLD 681

Query: 578 DE-------------LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            E              ++L YL +  T I ++   +GRL  +K L L+++S+L+ +P  I
Sbjct: 682 FEECRNMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLLNLKYL-LASDSSLKEVPAGI 740

Query: 625 RHLSKLTFLFISHCERLQT--LPELPCNLGLLSARNCT 660
             LS L  L ++  +  ++     LP +L LL   N T
Sbjct: 741 SKLSSLKNLSLALIDPYKSDFTEMLPASLTLLYISNDT 778


>gi|238908352|emb|CAZ40338.1| putative disease resistance protein [Raphanus sativus]
          Length = 2100

 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 255/912 (27%), Positives = 400/912 (43%), Gaps = 195/912 (21%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            Y VF SF G D R  F +HL    +   I  F D  + RG  I+ +L   I  S I+I++
Sbjct: 136  YRVFTSFHGPDVRKTFLTHLRKQFNCNGISMFDDQGIERGHTIAPALTQAIRESRISIVV 195

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHF-SRLRKRF 99
             ++ YASSRW                      FY VDPS VRKQ+  FG+ F    R++ 
Sbjct: 196  LTKHYASSRWCLDELLGILKCKEEIGQIVMTIFYGVDPSDVRKQTGDFGKVFKDTCRRKT 255

Query: 100  PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
             E+ +RW  ALT+  +++G        ES++IE+IA DV  +L+AT     + +VG+E  
Sbjct: 256  EEERRRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATISRDFEDMVGIEAH 315

Query: 160  IEEIESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            +++++SLL +  E G     I G  GI K TIA A+ +++S  F  + F  N+R +    
Sbjct: 316  LDKMQSLLHLDDEDGAMFAGICGPAGIGKTTIARALHSRLSSSFHLTCFMENLRGSCNSG 375

Query: 215  -EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVT----------- 260
             +E G    LQ+ LLS++    +MR  ++ +   R+  +KV I+ DDV            
Sbjct: 376  LDEYGLKLRLQELLLSKIFNQNDMRIYHLGAIPQRMCDQKVLIILDDVDDLQQLEALADE 435

Query: 261  -----SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIEL 315
                  GSR+++TT D+++L+    N  Y +      +A K+FC++AF           L
Sbjct: 436  TNWFGDGSRIVVTTEDQELLEQHGINNTYYVDLPTDDEARKIFCRYAFRRSLTPYGFETL 495

Query: 316  TDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQ 375
             ++  +    +P  L+V   +   R K                +I+ VL++ YDSL +++
Sbjct: 496  VERTTELCGKLPFGLRVQ--FYAERKKTTG-------------KIDAVLRVGYDSLHENE 540

Query: 376  KNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDM 422
            + +FL IA F   +    V ++               A KSL  +    +I MH LL+ +
Sbjct: 541  QTLFLLIAIFFNYQDDGHVKTMLADTNLDVRLGLKTLAYKSLTKISSQGKIVMHKLLQQV 600

Query: 423  GREIVRKE---------------SINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDM 467
            GR+ V+++                +  P KR  L    +I  VL+ ++G+  + G+S DM
Sbjct: 601  GRQAVQRQEPWKRRILIDPQEICDVLEPWKRQVLTDTDEIRDVLENDSGSRNLMGVSFDM 660

Query: 468  NKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVS---HL-EGVPF-AEVRHLEWPQCPL 522
            + +  ++ +++ AF+ M  LRFL+ Y  K +C  +   HL E + F   +R L W   P 
Sbjct: 661  STILHDMDISARAFTSMRNLRFLKVY--KTRCDTNVRVHLPEDMEFPPRLRLLHWEVYPR 718

Query: 523  KTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP--------------------------- 553
            K L    C E LV L +  T++EQLW+  Q L                            
Sbjct: 719  KFLPRTFCTEHLVELYLRDTELEQLWEGTQPLTNLKKMFLGSCLYLKELPDLAKATNLEK 778

Query: 554  -------------SSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-------- 590
                         SS+       + E+  C  L+ +P+   L +LE   + G        
Sbjct: 779  LRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLASLESFMMVGCYQLRSLP 838

Query: 591  ---TTIREL--PESLG-------RL-SWVKRL-ILSNNSNLERI---------PESIRHL 627
               TTI EL  P++L        RL S ++RL I     NLE++         P+ I+ L
Sbjct: 839  DISTTITELSIPDTLLEEFTEPIRLWSHLQRLDIYGCGENLEQVRSDIAVERIPDCIKDL 898

Query: 628  SKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL-PAGLSSMSSVLYVNLCNFLKL 686
             +L  L I  C +L +LPELP +L LL    C SLE L P  L S    L    C  L  
Sbjct: 899  QRLEELTIFCCPKLVSLPELPRSLTLLIVYECDSLETLAPFPLGSEIEALSFPECFRLDR 958

Query: 687  DPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGY 746
            +   +   ++  W              +  PG  IP  F H+ +G+   + +   R    
Sbjct: 959  EARRVITQLQSSW--------------VCLPGRNIPAEFHHRVIGNFLAICSNAYR---- 1000

Query: 747  NKLISFAFCAVV 758
                 F  CAVV
Sbjct: 1001 -----FKLCAVV 1007



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 233/821 (28%), Positives = 371/821 (45%), Gaps = 160/821 (19%)

Query: 72   FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKL 130
             FY VDPS VRKQ+  FG+ F    R++  E+ +RW  ALT+  +++G        ES++
Sbjct: 1167 IFYGVDPSDVRKQTGDFGKVFKETCRRKTEEERRRWSQALTDVGNIAGEHFLNWDKESEM 1226

Query: 131  IEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE-GVCKLRIWGIGGISKIT 189
            IE+IA DV  +L+AT     + +VG+E  ++E+ SLL +  E G   + I G  GI K T
Sbjct: 1227 IEKIARDVSNKLNATISRDFEDMVGIEAHLDEMNSLLHLDDEDGAMFVGICGPAGIGKTT 1286

Query: 190  IAGAVFNKISRHFEGSYFALNVREA-----EETGGIKDLQKKLLSELSKDGNMR--NIES 242
            IA A+ +++S  F+ + F  N+R +     +E G    LQ+ LLS++     ++  ++ +
Sbjct: 1287 IARALHSRLSSTFQHTCFMENLRGSCNSGTDEYGLKLRLQELLLSKIFNQNGVKLFHLGA 1346

Query: 243  QLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRM 286
               RL   KV IV DDV                  GSR+I+TT D+++L+    +  YR+
Sbjct: 1347 IKERLCDLKVLIVLDDVDDLQQLEALADDTNWFGDGSRIIVTTEDQEILEQHGISNTYRV 1406

Query: 287  KELVYADAHKLFCQWAFGGDHLDASH--IELTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
                  DA ++FC++AF    L A H   +L D+ IK    +PL L+V+G  L  +  + 
Sbjct: 1407 DFPTQVDARQIFCRFAFR--QLSAPHGFEKLVDRVIKLCSNLPLGLRVMGSSLRRKKVDD 1464

Query: 345  WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS--- 401
            WE  +++LE     +I+ VL++ Y+SL    + +FL IACF   +  D V ++   S   
Sbjct: 1465 WEGILQRLENSFDQKIDAVLRVGYNSLHKDDQFLFLLIACFFNYKDDDHVKAMLVDSNLD 1524

Query: 402  ----------KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
                      KSLI +     I MH LL+ +GRE V    +  P KR  L     I  VL
Sbjct: 1525 VRLGLKNLVYKSLIQISAEGTIVMHKLLQQVGREAVH---LQDPRKRQILIDSHQICDVL 1581

Query: 452  KKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM--------------------------- 484
            + ++   ++ GIS D + +   +++++  F +M                           
Sbjct: 1582 ENDSDGTSVMGISFDTSTIPNGVYISAQGFRRMRDLRFLSIYETRRDPNVRVHLPEDMSF 1641

Query: 485  -PKLRFLRFYGDKNKCMVSHL-------------------EGV-PFAEVRHL-------- 515
             P LR L +     KC+   L                   +GV P   ++ +        
Sbjct: 1642 PPLLRLLHWEVYPGKCLPHTLRPEHLVELCFVNSMLEQLWQGVQPLTNLKKMDLSGSLSL 1701

Query: 516  -EWPQ----CPLKTLNICA-EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPI------ 563
             E P       LK LN+     LV +      + +L +    L  S+  F T +      
Sbjct: 1702 KEVPDLSNATSLKRLNLTGCWSLVEIPSSIGDLHKLEELEMNLCVSVQVFPTLLNLASLE 1761

Query: 564  TFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRL----------ILSN 613
            +  ++ C  L ++PD   N++ L V  T ++E PES+   S +  L          +L  
Sbjct: 1762 SLRMVGCWQLSKIPDLPTNIKSLVVGETMLQEFPESVRLWSHLHSLNIYGSVLTVPLLET 1821

Query: 614  NS--------NLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
             S         +ERIP+ I+  + L FL+I+ C +L +LPELP +L  L   NC SLE +
Sbjct: 1822 TSQEFSLAAATIERIPDWIKDFNGLRFLYIAGCTKLGSLPELPPSLRKLIVDNCESLETV 1881

Query: 666  --PAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIP- 722
              P   +  +  LY   C  L     E   ++    ++             YFPG E+P 
Sbjct: 1882 CFPCD-TPTTDYLYFPNCFML---CQEAKRVITQQSLR------------AYFPGKEMPA 1925

Query: 723  -KWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPA 762
             ++  H+S GSS T+     RPA    +  F  C +V+ PA
Sbjct: 1926 AEFDDHRSFGSSLTII----RPA----ICKFRIC-LVLSPA 1957


>gi|297794769|ref|XP_002865269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311104|gb|EFH41528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 711

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 189/624 (30%), Positives = 300/624 (48%), Gaps = 98/624 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-------LIRGDNISQSLLGTIEA 54
           YDVF+ +  +DTR +F SHLH     + I  F+ +        L  G  ++  +   IE 
Sbjct: 9   YDVFIDYSSKDTRHSFVSHLHAAFGRRGISVFLAEHCTLSEATLKPGFELANEIQLAIER 68

Query: 55  SCIAIIIFSERYASSRW-----------------------FFYRVDPSHVRKQSHSFGRH 91
           S I +++FS+ YASS                         F+  V  S V +Q+  F   
Sbjct: 69  SKIYVVVFSKNYASSPLCLETLMTFMDLQRRKDGPVVIPVFYGDVTRSIVEQQTERFKED 128

Query: 92  FSRLRKRFPE---KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS 148
           FS+ R  F +   +++RW+  LTEAA L G +S   + +S+L+E+I  DV +RL  T   
Sbjct: 129 FSKHRGFFSDEKDRVERWRKGLTEAAKLHGHESIEQQNDSELVEDIVADVRERLCPT--- 185

Query: 149 KNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
              G++G    +  IE+LL   S  + +L IWG+ GI K  I+   FN++++HFE   F 
Sbjct: 186 ---GMIGFYSRLLGIENLLFKQSHDIYRLGIWGMPGIGKTAISQESFNQMTKHFETQCFI 242

Query: 209 LNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSG------ 262
            +   A    G+  L+++ L               +++L  K+V +V DDV +       
Sbjct: 243 QDFHVAFNDKGLYVLREEYL---------------IDKLREKRVLVVLDDVRNPMDAESF 287

Query: 263 -----------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG-GDHLDA 310
                      S +II++RDKQVL  C  +  Y +  L   +A +LF ++AF   +  D 
Sbjct: 288 LGGFDHCFGPESLMIISSRDKQVLHQCQVDSVYEIPALNKKEAQRLFTRFAFSEKEPSDT 347

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           + IE++ K ++YA G PLAL   G  L  +  E   +   K++  P  EI  V K SYD 
Sbjct: 348 NLIEVSKKVVEYADGNPLALCHYGRELGKKKPEEVVAEFEKIKQSPPREIMHVFKSSYDE 407

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           L ++++++FLDIA F  GE+ D V+ I +               +SL+ +     + M  
Sbjct: 408 LSENERSIFLDIAFFFNGENLDYVMRILEGCGFFPHVGIDRLVERSLLMISKNNNVEMQI 467

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN--TGTEAIEGISLDMNKVNREIH 475
           L++D+ R IV +E  N   +  RLW    I   L++N   GTE IEGI LD  K+   + 
Sbjct: 468 LIQDIARNIVNEEK-NQITRHRRLWDPSIIKSFLEENKPKGTEVIEGIFLDTTKLT--VD 524

Query: 476 MNSYAFSKMPKLRFLRFYGDKNKC-----MVSHLEGVPFAEVRHLEWPQCPLKTL--NIC 528
           +N  AF  M  LR L+ Y   ++      +   L  +P+ E+R L W + PL++   +  
Sbjct: 525 VNPKAFENMYNLRLLKIYSSNSESTQEFHLPKGLRSLPY-ELRLLHWEKYPLRSFPEDFD 583

Query: 529 AEKLVSLKMPCTKVEQLWDDVQRL 552
              LV L MP + ++ LW+  + L
Sbjct: 584 PRHLVELNMPYSHLQNLWEGTKSL 607


>gi|242276421|gb|ACS91452.1| M1 [Linum usitatissimum]
          Length = 1401

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 225/766 (29%), Positives = 358/766 (46%), Gaps = 108/766 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR   T  L+  L    I TF  DD+L +G+ I  +LL  I  S I + 
Sbjct: 61  YEVFLSFRGPDTRYQITDILYRFLCRTKIHTFRDDDELRKGEEIGSNLLRAIYQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA+S+W                       FY VDP  VR Q+  + + F     +
Sbjct: 121 IISRGYANSKWCLMELAEIVRYQELDTRRIIFPIFYMVDPKDVRHQTGHYRKAFQEHATK 180

Query: 99  FPE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           + E  ++ WKNAL +   L G+       +  + +E++ ++  R+    F  +   LVG+
Sbjct: 181 YDEMTIQNWKNALNKVGTLKGWHVKNNDEQGAIADEVSANIWSRISKENFILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +E I   L + SE V  + ++G+GGI K T A AV+NKIS HF+   F  NVR  +E
Sbjct: 241 DDHVEAILKTLSLDSESVAMVGLYGMGGIGKTTTAKAVYNKISSHFDRCCFVDNVRAMQE 300

Query: 217 T-GGIKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDV-------- 259
              GI  LQKKL+SE+        + D   R +  +  R+++ K+ +V DDV        
Sbjct: 301 QKDGIFILQKKLVSEILRMDSVGFTNDSGGRKMIKE--RVSKFKILVVLDDVDEKFKFED 358

Query: 260 --------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDHLD 309
                    SG+R IIT+R++ VL     N  K Y +  +    + +LF + AF  D   
Sbjct: 359 ILGCPKDFDSGTRFIITSRNQNVLSRLNENQCKLYEVGSMSQQHSLELFSKHAFKKDTPP 418

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKISY 368
           + +  L +  +    G+PL LKV G  L  +   VWE  + +L + +   E+ + LKISY
Sbjct: 419 SDYETLANDIVSTTGGLPLTLKVTGSLLFRQEIGVWEDTLEQLRKTLDLDEVYDRLKISY 478

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRIRM 415
           D+L    K +FLDIACF  G ++++                IF   + +I +      +M
Sbjct: 479 DALKAEAKEIFLDIACFFIGRNKEQPYYMWSDCNFYPKSNIIFLIQRCMIQVGDDGVFQM 538

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN-KVNREI 474
           HD LRDMGREIVR+E +  P KR+R+   ++   +L    G+  ++ IS+    K   + 
Sbjct: 539 HDQLRDMGREIVRREDVERPWKRSRICSSEEGIDLLLNKKGSSKVKAISIPKTWKSTVKC 598

Query: 475 HMNSYAFSKMPKLRFLR-----FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICA 529
              S  F  + +LR+         GD N  ++ +L+ +   +  H      PL   N   
Sbjct: 599 EFKSECFLNLSELRYFHASSAMLTGDFNN-LLPNLKWLHLPKYSHYREDDPPLT--NFTM 655

Query: 530 EKLVSLKMPCTK--VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLE 584
           + LV L +P TK  +   W  + ++   L   +    + +      ERLP      +++E
Sbjct: 656 KNLVILDLPNTKKEINSCWSHMMKMAPRLKVLQLYSVYGVS-----ERLPFCWRFPKSIE 710

Query: 585 YLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
            L++    I+E+   +G L  +K L LS+          I+ +S  TF        L+ L
Sbjct: 711 VLSMSRIEIKEV--DIGELKKLKTLDLSSC--------RIQKISGGTFGM------LKGL 754

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE 690
            EL      L A  CT+L ++ A +  +SS+  + + N  +++ NE
Sbjct: 755 IELH-----LEAFQCTNLREVVADICQLSSLKILKIDNVKEVEINE 795


>gi|15242570|ref|NP_198826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007127|gb|AED94510.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 222/720 (30%), Positives = 330/720 (45%), Gaps = 98/720 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR +  SHL+  L+ + I TF DD+ +  GD+IS+ L   IE S   ++
Sbjct: 12  YDVFLSFRGEDTRHSIVSHLYEALTSRGIATFKDDKRLELGDHISEELQRAIEGSDFVVV 71

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           + SE Y +SRW                      FYRV+PS VR Q  SF     +   + 
Sbjct: 72  VLSENYPTSRWCLMELQSIMELQMEGRLGVFPVFYRVEPSAVRYQLGSFDLEGYQRDPQM 131

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            + + +W+ AL   ADLSG  S     E+ ++ +I  D+ KR     +   +  VGV+  
Sbjct: 132 ADMVPKWRQALKLIADLSGVASGQCIDEATMVRKIVEDISKRKTLKHKIDFRNFVGVDTH 191

Query: 160 IEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEET 217
           ++ ++SLL + S    V  + IWG+GGI K TIA  +++++S  F  SYF  +++   + 
Sbjct: 192 LQGLKSLLDMDSNNDEVRMIGIWGMGGIGKTTIAKCLYDQLSSQFTASYFTQDIKGIHKE 251

Query: 218 GGIKDLQKKLLSELSKDGNM-----RNIESQLNRLARKKVRIVFDDVTS----------- 261
             +  LQ +LL     D  M        E    RL   KV +V D V             
Sbjct: 252 LDLLHLQNRLLYNTLGDDIMPWSVEAGREVIAARLGNHKVLLVLDGVDKLVQIHALAKET 311

Query: 262 -----GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF-GGDHLDASHIEL 315
                 SR+IITTRDK +L +C     Y +K L   D+ ++F Q AF GG        +L
Sbjct: 312 RWFGRQSRIIITTRDKGLLNSCGVKTIYDVKCLDDKDSLQMFKQIAFEGGSPPSVDFEQL 371

Query: 316 TDKAIKYAQGVPLALKVLGCYLCGR--SKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           + +A + A G+P AL+    +L GR  S E WE A+  LE  P   I E+LKISY+ L  
Sbjct: 372 SIRAARLAHGLPSALQAYALFLRGRANSPEEWEEAVCGLESTPDENIMEILKISYEGLAK 431

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLR 420
           + +N FL +AC   G+    V S+ D             A KSLIN+     + +H L+ 
Sbjct: 432 AHQNAFLHVACLFNGDTFRRVTSLLDVSRMESNLWMRVLAEKSLINITSNGYVTLHKLVE 491

Query: 421 DMGREIVRKES--INHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
            MGREI+      I  P             + +    G    E ISL + ++     M +
Sbjct: 492 QMGREIMLASGKFIGDP-------------ETIHDTLGMGQTESISLHICEMTCAFSMAT 538

Query: 479 YAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRH-----LEWPQCPLK--TLNICAEK 531
             FS+M KLRFL+ Y   N+   S L+ +P  E        L W   PL    L      
Sbjct: 539 GVFSRMYKLRFLKVYKHVNE-RESMLQVIPEDEYPSINCLLLHWDAFPLSKFPLRFNTYC 597

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTV 588
           LV L +  + +E LW       S +  F      ++   K L++LPD     E  E L  
Sbjct: 598 LVELNLRHSNLETLW-------SGVLKFGHLRKLDVTGSKNLKQLPDLSCAEELDELLLE 650

Query: 589 KGTTIRELPESLGRLSWVKRLILS----NNSNLERIPESIRHLSKLTFLFISHCERLQTL 644
           +   ++ +PES+   S + RL LS      + +  + + +    ++T LF +    +Q +
Sbjct: 651 QCKRLKGIPESIAERSTLGRLNLSYYGGAKNPMGVVIQKVSQTQRITLLFPTSSVEMQLM 710



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLG 652
           ++ L + L     +  L LS++ + +++P SIR L+ L  L +++C++L++L ELP +L 
Sbjct: 896 VKSLSDQLSHFPKLAYLDLSSH-DFKKLPSSIRDLTSLVTLCLNNCKKLKSLEELPLSLQ 954

Query: 653 LLSARNCTSLE 663
            L A+ C SLE
Sbjct: 955 FLDAKGCDSLE 965



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 12/108 (11%)

Query: 581 ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCER 640
           E LE L + G     LPE + RLS +K L L N S L+ +PE    L+++  L +S+C+ 
Sbjct: 811 EFLENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPE----LTQVQSLTLSNCKN 866

Query: 641 LQTLPEL------PCNLGLLS--ARNCTSLEKLPAGLSSMSSVLYVNL 680
           L++L ++      P    LL     NC +++ L   LS    + Y++L
Sbjct: 867 LRSLVKISDASQDPSLYSLLELCLDNCKNVKSLSDQLSHFPKLAYLDL 914


>gi|237769815|dbj|BAH59426.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 228/793 (28%), Positives = 353/793 (44%), Gaps = 112/793 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG D R  F SHL   L L +I  FIDD   RG  +   LL  IE S I + I
Sbjct: 16  HQVFINFRGADLRRRFVSHLVTALKLNNINVFIDDYEDRGQPLD-VLLKRIEESKIVLAI 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  Y  S W                      FY+++PS VR     FG  F  + K   
Sbjct: 75  FSGNYTESVWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKGKFGDRFRSMAKG-D 133

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA------------TFQS 148
           E+ K+WK A     ++ G   +    ES+ + EI   V   L                 +
Sbjct: 134 ERKKKWKEAFNLIPNIMGITIDKKSVESEKVNEIVKAVKTALTGIPPEGSHNAVVGALGN 193

Query: 149 KNKGL---------VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKI 198
            N G           G E  ++++E  L     +G   + + G+ GI K T+   ++   
Sbjct: 194 SNAGTSSGDKKHETFGNEQRLKDLEEKLDRDKYKGTRIIGVVGMPGIGKTTLLKELYKTW 253

Query: 199 SRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGN--MRNIESQLNRLARKKVRIVF 256
              F        +R   +   +  L + LL ELSK  N  + N++   ++L  +KV +V 
Sbjct: 254 QGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLNNPHVDNLKDPYSQLHERKVLVVL 313

Query: 257 DDVT-------------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
           DDV+                    GSRV+I T D   L N   +  Y ++ L + D+ +L
Sbjct: 314 DDVSKREQIDALREILDWIKEGKEGSRVVIATSDMS-LTNGLVDDTYMVQNLNHRDSLQL 372

Query: 298 FCQWAFGGDHLDASH---IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
           F   AF  D  +      ++L++  + YA+G PLALKVLG  L  +S + W S M+KL  
Sbjct: 373 FHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSMDHWNSKMKKLAQ 432

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-----------KS 403
            P   I  V ++SYD L  +QK+ FLDIACF   + +D V S+  +S           KS
Sbjct: 433 SPSPNIVSVFQVSYDELTTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKS 491

Query: 404 LINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKKN 454
           L +  L      R+ MHDLL    REI  K S     ++ RLW H+ I +     VL+  
Sbjct: 492 LTDKFLINTCDGRVEMHDLLYKFSREIDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNK 551

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEG 506
                + GI LD+++V  E  ++   F  M  LR+L+FY           NK  +     
Sbjct: 552 MKAANVRGIFLDLSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLK 611

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
           +P  EVR L W + PL+TL  +     LV LK+P +++EQLW+  +  P   C     + 
Sbjct: 612 LPLKEVRCLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTP---CLRWVDLN 668

Query: 565 FEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                C +      + E L+ L ++G TT++  P  + ++  +  L L   ++LE +PE 
Sbjct: 669 HSSKLCSLSGL--SKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE- 725

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--C 681
             +L  L  L +S C   +  P +  N+  L   + T++ +LP  +  +  ++ +N+  C
Sbjct: 726 -MNLISLKTLTLSGCSTFKEFPLISDNIETLYL-DGTAISQLPMNMEKLQRLVVLNMKDC 783

Query: 682 NFLKLDPNELSEI 694
             L+  P  + E+
Sbjct: 784 KMLEEIPGRVGEL 796



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 177/441 (40%), Gaps = 93/441 (21%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC-PLKTLNICAEKLVSLKMPCTKV 542
            M K++ L F   K    +  L  +    ++ L    C   K   + ++ + +L +  T +
Sbjct: 703  MKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAI 762

Query: 543  EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT--------------- 587
             QL       P ++   +  +   + DCKMLE +P  +  L+ L                
Sbjct: 763  SQL-------PMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPE 815

Query: 588  ----------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
                      + GT I  +P+    L  V+ L LS N+ +  +P  I  LS+L +L + +
Sbjct: 816  IDISFLNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM-------SSVLYVNLCNFLKLDPNE 690
            C  L ++PE P NL  L A  C+SL+ +   L+ +       S+ ++ N  N  +    E
Sbjct: 872  CTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQAAKEE 931

Query: 691  LSEIVKDGWMKHSLYEERG----IKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            ++   +      S   +R     + +S++   FPG E+P WF H+++GS   +K  P   
Sbjct: 932  ITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWH 991

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLY------ 796
                KL   A CAVV            S  D  D  +  +V C +K K E   +      
Sbjct: 992  D--KKLAGIALCAVV------------SCLDPQDQVSRLSVTCTFKVKDEDKSWVPYTCP 1037

Query: 797  --SWFL--GKISYVESDHVFLG---------CNSFGG-EYFGPNYDEFSFRIHCSFHFPP 842
              SW    G    +E DHVF+G         C+  G  +   P      F +        
Sbjct: 1038 VGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNSDECNPTEASLKFTVTGGTS--- 1094

Query: 843  YLERGEVK--KCGIHFVYAQD 861
              E G+ K  KCG+  VYA+D
Sbjct: 1095 --ENGKYKVLKCGLSLVYAKD 1113


>gi|105923156|gb|ABF81460.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 697

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 168/448 (37%), Positives = 240/448 (53%), Gaps = 51/448 (11%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT HL+  L    I TF  DD+L RG+ IS  +L  I+ S I+I+
Sbjct: 69  YDVFLSFRGEDTRKTFTDHLYAALVQAKIHTFRDDDELPRGEEISDHVLRAIQESKISIV 128

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FS+ YASSRW                       FY +DP  VRKQ+  F   F +  +R
Sbjct: 129 VFSKGYASSRWCLDELVEILKCKRKKTGQIVLPIFYDIDPLDVRKQTGRFAEAFVKHEER 188

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIR--PESKLIEEIANDVLKRLDATFQSKNKGLVG 155
           F EK+ K W+ AL EA +LSG++ N +   PE+  ++EI  DVL +L        + LVG
Sbjct: 189 FEEKLVKEWRKALKEAGNLSGWNLNDMANGPEANFVKEIIKDVLNKLGPKHLYVPEHLVG 248

Query: 156 VECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVRE-A 214
           ++     I   L    + V  + I G+ GI K TIA  VFN++   FEGS F  ++ E +
Sbjct: 249 MDRLSRNIFYFLSTAIDDVQIVGIHGMLGIGKTTIAKVVFNQLCNGFEGSCFLSDINEKS 308

Query: 215 EETGGIKDLQKKLLSELSKD--GNMRNIESQL----NRLARKKVRIVFDDVT-------- 260
           ++  G+  LQ++LL  + K    N+  ++        RL RK+V +V DDV         
Sbjct: 309 KQFNGLALLQEQLLHNILKQDVANINCVDRGKVLIKERLCRKRVLLVADDVARQDQLNAL 368

Query: 261 --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GSRVIITTRD  +L+   A++  R++EL   +A +LF   AF        +
Sbjct: 369 MGERSWFGPGSRVIITTRDSNLLRE--ADQTNRIEELEPDEALQLFSWHAFKDTKPAKDY 426

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
           IEL+ KA+ Y  G+P AL+V+G  L G+++  WES +  L  IP+ +I+  L  SY +LD
Sbjct: 427 IELSKKAVDYCGGLPFALEVIGARLSGKNRVTWESEIDNLSRIPNQDIQGKLLTSYHALD 486

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA 400
              +  FLDIACF  G+ ++ V  +  A
Sbjct: 487 GELQRAFLDIACFFIGKEKEYVAKLLGA 514


>gi|5823585|emb|CAB53784.1| disease resistance protein rps4-RLD [Arabidopsis thaliana]
          Length = 1217

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 229/793 (28%), Positives = 355/793 (44%), Gaps = 112/793 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG D R  F SHL   L L +I  FIDD   RG  +   LL  IE S I + I
Sbjct: 16  HQVFINFRGADLRRRFVSHLVTALKLNNINVFIDDYEDRGQPLD-VLLKRIEESKIVLAI 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  Y  S W                      FY+++PS VR     FG  F  + K   
Sbjct: 75  FSGNYTESVWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKGKFGDRFRSMAKG-D 133

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDV-------------------LKR 141
           E+ K+WK A     ++ G   +    ES+ + EI   V                   L  
Sbjct: 134 ERKKKWKEAFNLIPNIMGIIIDKKSVESEKVNEIVKAVKTALTGIPPEGSHNAVVGALGN 193

Query: 142 LDATFQSKNKG--LVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKI 198
            DA   S +K     G E  ++++E  L     +G   + + G+ GI K T+   ++   
Sbjct: 194 SDAGTSSGDKKHETFGNEQRLKDLEEKLDRDKYKGTRIIGVVGMPGIGKTTLLKELYKTW 253

Query: 199 SRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGN--MRNIESQLNRLARKKVRIVF 256
              F        +R   +   +  L + LL ELSK  N  + N++   ++L  +KV +V 
Sbjct: 254 QGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLNNPHVDNLKDPYSQLHERKVLVVL 313

Query: 257 DDVT-------------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
           DDV+                    GSRV+I T D   L N   +  Y ++ L + D+ +L
Sbjct: 314 DDVSKREQIDALREILDWIKEGKEGSRVVIATSDMS-LTNGLVDDTYMVQNLNHRDSLQL 372

Query: 298 FCQWAFGGDHLDASH---IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
           F   AF  D  +      ++L++  + YA+G PLALKVLG  L  +S + W S M+KL  
Sbjct: 373 FHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSMDHWNSKMKKLAQ 432

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-----------KS 403
            P   I  V ++SYD L  +QK+ FLDIACF   + +D V S+  +S           KS
Sbjct: 433 SPSPNIVSVFQVSYDELTTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKS 491

Query: 404 LINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKKN 454
           L +  L      R+ MHDLL    RE+  K S     ++ RLW H+ I +     VL+  
Sbjct: 492 LTDKFLINTCDGRVEMHDLLYKFSREVDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNK 551

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEG 506
                + GI LD+++V  E  ++   F  M  LR+L+FY           NK  +     
Sbjct: 552 MKAANVRGIFLDLSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLK 611

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
           +P  EVR L W + PL+TL  +     LV LK+P +++EQLW+  +  P   C     + 
Sbjct: 612 LPLKEVRCLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTP---CLRWVDLN 668

Query: 565 FEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                C +      + E L+ L ++G TT++  P  + ++  +  L L   ++LE +PE 
Sbjct: 669 HSSKLCSLSGL--SKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE- 725

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--C 681
             +L  L  L +S C   +  P +  N+  L   + T++ +LP  +  +  ++ +N+  C
Sbjct: 726 -MNLISLKTLTLSGCSTFKEFPLISDNIETLYL-DGTAISQLPMNMEKLQRLVVLNMKDC 783

Query: 682 NFLKLDPNELSEI 694
             L+  P  + E+
Sbjct: 784 KMLEEIPGRVGEL 796



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 177/441 (40%), Gaps = 93/441 (21%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC-PLKTLNICAEKLVSLKMPCTKV 542
            M K++ L F   K    +  L  +    ++ L    C   K   + ++ + +L +  T +
Sbjct: 703  MKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAI 762

Query: 543  EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT--------------- 587
             QL       P ++   +  +   + DCKMLE +P  +  L+ L                
Sbjct: 763  SQL-------PMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPE 815

Query: 588  ----------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
                      + GT I  +P+    L  V+ L LS N+ +  +P  I  LS+L +L + +
Sbjct: 816  IDISFLNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM-------SSVLYVNLCNFLKLDPNE 690
            C  L ++PE P NL  L A  C+SL+ +   L+ +       S+ ++ N  N  +    E
Sbjct: 872  CTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQAAKEE 931

Query: 691  LSEIVKDGWMKHSLYEERG----IKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            ++   +      S   +R     + +S++   FPG E+P WF H+++GS   +K  P   
Sbjct: 932  ITSYAQRKCQLLSYARKRHNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWH 991

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLY------ 796
                KL   A CAVV            S  D  D  +  +V C +K K E   +      
Sbjct: 992  D--KKLAGIALCAVV------------SCLDPQDQVSRLSVTCTFKVKDEDKSWVPYTCP 1037

Query: 797  --SWFL--GKISYVESDHVFLG---------CNSFGG-EYFGPNYDEFSFRIHCSFHFPP 842
              SW    G    +E DHVF+G         C+  G  +   P      F +        
Sbjct: 1038 VGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNSDECNPTEASLKFTVTGGTS--- 1094

Query: 843  YLERGEVK--KCGIHFVYAQD 861
              E G+ K  KCG+  VYA+D
Sbjct: 1095 --ENGKYKVLKCGLSLVYAKD 1113


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 186/534 (34%), Positives = 295/534 (55%), Gaps = 53/534 (9%)

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           LVG++  +EE+ S + IG   V  + I G+GGI K TIA A +N +S  FEG  F  NVR
Sbjct: 13  LVGLDSRLEELHSHVGIGQNDVRIIGICGMGGIGKTTIATAYYNWMSIQFEGRAFLANVR 72

Query: 213 EAEETGGIKDLQKK-----LLSELSKDGNMRNIESQL-NRLARKKVRIVFDDVTS----- 261
           E    G +  LQ++     L+ +  K  N+ N    + +RL  K+V +V DDV       
Sbjct: 73  EVSSKGRLLSLQEQLLSEILMGKKVKIWNVYNGTDMIKSRLRYKRVLVVIDDVNQLSQLQ 132

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      GSRVIITTRD+ +L +   ++ Y++K L  ++A +LF   AF  +H   
Sbjct: 133 NLAGKSDWFGPGSRVIITTRDEHLLISHGVDEIYKVKGLNKSEALQLFSLKAFRNNHPQK 192

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
            ++ L+   + YA G+PLAL+VLG +L  R+ E   +A+ +++ IP  EI + L+IS+D 
Sbjct: 193 DYMTLSTDIVYYANGLPLALEVLGSFLFNRTLEESRNALDRIKEIPKDEILDALQISFDG 252

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHD 417
           L++ +K +FLDIACF +G++ D +  I D               KSLI + +  R+ MHD
Sbjct: 253 LEEMEKQIFLDIACFFKGKNIDHITKILDGCGFYPDIGIRVLIEKSLITI-VGERLWMHD 311

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMN 477
           LL++MG ++V++ES   PG+R+RLW +KDI+ VL KNTGT  +EG+ LD+ +   EI + 
Sbjct: 312 LLQEMGWKLVQQESPEEPGRRSRLWLYKDIFHVLTKNTGTADVEGMVLDLPEA-EEIQLE 370

Query: 478 SYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSL 535
           + AF K+ K+R L+F   +N      LE +   E+R+L+W   P + L     + +L+ L
Sbjct: 371 AQAFRKLKKIRLLKF---RNVYFSQSLEYLS-NELRYLKWYGYPFRNLPCTFQSNELLEL 426

Query: 536 KMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-T 592
            M  ++VEQ+W+  ++       F      ++   K L + PD   + +LE L ++G   
Sbjct: 427 NMSYSQVEQIWEGTKQ-------FNKLKIMKLSHSKNLVKTPDFRGVPSLEKLVLEGCLE 479

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           ++E+ +S+G L  +  L L +   L  +PESI  L  L  + +S C  L  + E
Sbjct: 480 LQEIDQSIGILERLALLNLKDCKKLSILPESIYGLKALKIVNLSGCSILDYMLE 533



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 132/302 (43%), Gaps = 43/302 (14%)

Query: 579 ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS 636
           +L +L  L +    ++E  +P  L  LS +K   LS N N   +P S+  LSKL  L++ 
Sbjct: 596 DLYSLMVLDLGNCNLQEETIPTDLSCLSSLKEFCLSGN-NFISLPASVCRLSKLEHLYLD 654

Query: 637 HCERLQTLPELPCNLGLLSARNCTSLEKLPA--GLSSMSSVLYVNLCNFLKLDPNELSEI 694
           +C  LQ++  +P ++ LLSA+ C++LE LP    LS + S  + N  N  KL  N+    
Sbjct: 655 NCRNLQSMQAVPSSVKLLSAQACSALETLPETLDLSGLQSPRF-NFTNCFKLVENQGCNN 713

Query: 695 VKDGWMKHSLYEERGIKKS--MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
           +    +++ L      K    +  PG+EIP W  HQS+G  +     PP     +K + F
Sbjct: 714 IGFMMLRNYLQGLSNPKPGFDIIIPGSEIPDWLSHQSLGDCSISIELPPVWCD-SKWMGF 772

Query: 753 AFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLY----SWFLGKISYVES 808
           A CAV V      Y        D D   +        K +GH +     +   ++  V S
Sbjct: 773 ALCAVYVI-----YQEPALNFIDMDLTCFI-------KIKGHTWCHELDYSFAEMELVGS 820

Query: 809 DHV---------FLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYA 859
           D V         FLG +  G      ++ E  F+ H    +        VKK G+  VY 
Sbjct: 821 DQVWLFFLSRYEFLGIDCQGVAKTS-SHAEVMFKAHGVGLY--------VKKFGVRLVYQ 871

Query: 860 QD 861
           QD
Sbjct: 872 QD 873


>gi|224144422|ref|XP_002325285.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862160|gb|EEE99666.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 187/517 (36%), Positives = 266/517 (51%), Gaps = 69/517 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  F  HL++ L    I TF DD+ L  G+ ISQ L   I+ S I+I+
Sbjct: 1   YHVFLSFRGADTRKTFLGHLYNALVQAGIHTFKDDEELPPGEEISQQLKKAIQESKISIV 60

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR-KR 98
           +FS  YASSRW                      F  VDPSHVRKQ  SF + F     K 
Sbjct: 61  VFSRDYASSRWCLNELVEILECRNTKGRTVFPIFCGVDPSHVRKQEGSFKKAFKAYENKE 120

Query: 99  FPEKMKRWKNALTEAADLSGFD--SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGV 156
             EK+ +WKNAL +AA+LSG D  S     ES LI++I  DVL +LD    +  K LVG+
Sbjct: 121 EKEKINKWKNALKDAANLSGKDIYSTANGDESVLIKKIVKDVLNKLDIKNLNIPKYLVGI 180

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +++I   L   S+ V  + I G+ G+ K TIA  V+ K+ + F+GS F  +V E  +
Sbjct: 181 DSCVDDIIKSLN-ASDDVSMVGIRGMLGMGKTTIAKVVYQKLFQKFDGSCFLFDVNEKSK 239

Query: 217 TGGIK-DLQKKLLSE-----LSKDGNMRNIESQL----NRLARKKVRIVFDDV------- 259
               K +LQK+L+ E     + K   + +++S +    + L  KK+ +V D +       
Sbjct: 240 GPDSKVELQKQLIRETLGVNILKRKKISDVDSGISLIKDLLGNKKILLVLDGMDQPQQLE 299

Query: 260 --------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GS++IITT ++++L     +KK+ ++E        LF   AF G   +  
Sbjct: 300 TFGDRSVFAKGSKIIITTTNEKLLAQLKVDKKHSVEEWDEEMCLDLFNFHAFEGKTPEEE 359

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEIIPHVEIEEVLKISYDS 370
             EL+   ++ +  +P AL VLG      S ++ WE  + +L   P  +I   LK SYDS
Sbjct: 360 LAELSKVVVEQSGKLPSALVVLGNRFSQISERDEWEKEIYELRKFPD-QIHSKLKGSYDS 418

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDA----------------SKSLINLDLFYRIR 414
           L+D  K++FLDIACF  GE  D V SI                    +SLI +     I 
Sbjct: 419 LEDDLKSIFLDIACFFVGEDADFVASILGGRYGYCNNLRSRIQSLEERSLITIHFDDTIM 478

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL 451
           M+DL++ MGREIVR+ S  +PGK +R+W H+D   VL
Sbjct: 479 MNDLVQKMGREIVRQTSHKYPGKHSRIWDHEDALDVL 515


>gi|321530320|gb|ADW94527.1| putative TIR-NBS-LRR protein [Pinus monticola]
          Length = 1490

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 233/821 (28%), Positives = 382/821 (46%), Gaps = 152/821 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVF+S RG D +  F SHL+  L    ++ F+D Q L +G++ +  + G IE + + I 
Sbjct: 17  YDVFISHRGPDVKKTFASHLYRRLFSFGLRVFLDYQELQKGEDFNCEIKGAIETASVHIA 76

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRL------RK 97
           IFS  YA S W                  F++V P+ +R+ S   G + + L      RK
Sbjct: 77  IFSPTYADSPWCLDELVFMLETTAPIIPVFHKVKPTDLRR-SQGEGVYATSLLNLEKKRK 135

Query: 98  RFPEK-------MKRWKNALTEAADLSGFDSNV--IRPESKLIEEIANDVLKRLDATFQS 148
           R  ++       ++ W++AL+  AD+SGFD +V     E +L+ ++   VLK+       
Sbjct: 136 RDSDQPRYDSTTIENWRDALSRVADISGFDPDVGFNGDEGELLNQLVEVVLKKGKKKLNV 195

Query: 149 KNKGLVGVECSIEEIESLLCIGSEG--VCKLRIWGIGGISKITIAGAVFNKISRHFEGSY 206
                 G++  +E+ E+ L +   G  V  + I G+GG  K T+   +FN+ S  +  S 
Sbjct: 196 AQYP-TGLDDLVEDFETKLSLQQHGERVQFVGITGLGGAGKTTLVKELFNRNSSRYSKSC 254

Query: 207 FALNVREAEETGGIKDLQKKLLSEL---------SKDGNMRNIESQLNRLARKKVRIVFD 257
           F ++VRE  ++  I  LQ+KLL +L         SKD  +  +    + L+   V +V D
Sbjct: 255 FLIDVREKAKSS-IPSLQRKLLKDLCASDQEPIDSKDEGIEILRKHFSVLS-APVLLVLD 312

Query: 258 DV--------------------TSGSRVIITTRDKQVLKNCWANKKY--RMKELVYADAH 295
           DV                       S ++IT+RD +VL      K    ++  L    + 
Sbjct: 313 DVDHQDQVYALLPVTDKGILTLPPSSLILITSRDMEVLTRSGVQKPSICKLTGLSEERSR 372

Query: 296 KLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRS-KEVWESAMRKLEI 354
           +LFC  AF   H  +    L D+ ++   G+PL+LKV G  LC  + K  W+  ++KL  
Sbjct: 373 ELFCSHAFCQPHPLSGFEPLVDQFLEVCSGLPLSLKVFGGLLCRNTDKSYWKKQVKKLRK 432

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------S 401
             H +I++ L++SYD+L++ ++ +FLDIACF  G++RD  I ++DA             S
Sbjct: 433 TLHKDIQKSLQVSYDALEEEEQQIFLDIACFFIGKNRDTAIRVWDASGWDGLLVFQSLLS 492

Query: 402 KSLINLDL---------FYRIRMHDLLRDMGREIVRKESINHPGKRNRLW----HHKDIY 448
           K L+ +D+          Y IRMHD LRDMGR++      N  G   RLW    H +D+ 
Sbjct: 493 KCLVEMDIDETESPSHNIYVIRMHDHLRDMGRDLA-----NSSGFPCRLWRGTKHIEDLL 547

Query: 449 QVLKKNTGTEAIE-------------GISLDMNKVNREIHMNSYAFSKMPKLRFLRF--Y 493
           Q+  K T    I               ++   ++        S++  KM KL+ L     
Sbjct: 548 QLSSKATKVRGIRMSHREQYYKRGYGKVAYSDDESGSSDEDPSFSRYKMKKLQLLDIDVA 607

Query: 494 GDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSLKMPCTKVEQLW-DDVQ 550
            D+ KC+   LE V   ++    W  C   +L   I  E L  L++    +E LW +DVQ
Sbjct: 608 EDRLKCL---LETVDSPKLLWFRWAHCRCSSLPPYIPMENLSVLELESHTLETLWQEDVQ 664

Query: 551 ---------------RLPSSLCTFKTPITFEII----DCKMLERLPDE---LENLEYLTV 588
                          ++P S+   K     E++    +   +  +P E   L +L++L +
Sbjct: 665 APLKLRELLIHAPLSKIPKSIGQLKHLERMEVVPSWFNKSSIVDIPKEFCDLRSLKHLVL 724

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ----TL 644
           + + +  LP+S G LS ++ + LS  S LER+P+S  +L KL +L +++C  L     T 
Sbjct: 725 RLSNLSSLPDSFGNLSGLEHIDLSRCSQLERLPDSFGNLIKLKYLDLNNCSNLTLSSGTF 784

Query: 645 PELPCNLGLLSARNCTSLEKLPAGLSSMSSV--LYVNLCNF 683
            ++   L  +  + C  +E LP+ + +  S   LYV+L N 
Sbjct: 785 VKIS-TLAYIGLQGCHKIEVLPSQIVNQPSREGLYVSLRNL 824


>gi|357499697|ref|XP_003620137.1| Resistance protein [Medicago truncatula]
 gi|355495152|gb|AES76355.1| Resistance protein [Medicago truncatula]
          Length = 1257

 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 253/840 (30%), Positives = 386/840 (45%), Gaps = 161/840 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L   L  K ++TF+DD+ L +G+ I+ SL+  IE S +AI+
Sbjct: 10  YDVFLSFRGEDTRYGFTGNLWKALHDKGVRTFMDDEELQKGEEITPSLIKAIENSNMAIV 69

Query: 61  IFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKM 103
           + S+ YASS +                  FY+VDPS VRK   S+G    +   +    +
Sbjct: 70  VLSKNYASSSFCLKELSKILEVGLFVLPVFYKVDPSDVRKLEKSYGEAMDK--HKASSNL 127

Query: 104 KRWKNALTEAADLSGFDSNVIRP-ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
            +WK +L + A+LSGF        E + I +I   VL+ +          LVG+E   + 
Sbjct: 128 DKWKMSLHQVANLSGFHYKKRDGYEHEFIGKIVEQVLRNIKPVALPIGDYLVGLEHQKQH 187

Query: 163 IESLLCIGSE-GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIK 221
           + SLL +GS+  +  + I GIGGI K T+A  V+N I   F+GS F   VRE  +  G+ 
Sbjct: 188 VTSLLNVGSDDAIHMVGIHGIGGIGKTTLALEVYNSIVCQFQGSCFLEKVRENSDKNGLI 247

Query: 222 DLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVTS-------------- 261
            LQK LLS++  + N+      + I     RL +KK+ ++ DDV +              
Sbjct: 248 YLQKILLSQIFGEKNIELTSVGQGISMLRQRLHQKKILLLLDDVDNLEQLEAIAGRSVWF 307

Query: 262 --GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA----------------- 302
             GSRVIITTRDK++L        Y +  L   DA  L  +W                  
Sbjct: 308 GPGSRVIITTRDKRLLTRHEIEITYEVNGLNDEDAFDLI-RWKALKNKYSPSYKDILFVT 366

Query: 303 -FGGDHLD------ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEII 355
            +G + +D      + ++ +  +A+ YA G+PLAL+V+G +   ++ E  + A+ + E +
Sbjct: 367 KYGRELMDMNDKVFSGYVHVLKRAVAYASGLPLALEVIGSHFFNKTIEECKCALDRYERV 426

Query: 356 PHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------------S 401
           P  +I+  L++S+++L + +K+VFLDIAC  +G     V  I  A               
Sbjct: 427 PDKKIQTTLQLSFNALQEEEKSVFLDIACCFKGWKLKRVEEILHAHHGDIMKDHINALVE 486

Query: 402 KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT------ 455
           KSLI +     + +HDL+ DMG+EIVR+ES  +PGKR+RLW  KDI +VL++NT      
Sbjct: 487 KSLIKVSESGNLTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDIIRVLEENTVSNNDM 546

Query: 456 ---GTEAIEGISLD--------------MNKVNREIHMNSYAFSKMPK-----LRFLR-- 491
              GT  IE I  D              M  +   I  N   FSK PK     LR L   
Sbjct: 547 DDLGTSKIEIIYFDRWIRVEWDGEAFKKMENLKTLIFSNDVFFSKNPKHLPNSLRVLECR 606

Query: 492 --------FYGDKNKC-MVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKV 542
                   F+   ++C    H    PF      EW     K       ++++L       
Sbjct: 607 YHKYHSSDFHVHDDRCHFFIHPPSNPF------EWKGFFTKASKFENMRVLNLDHSEGLA 660

Query: 543 E---------------QLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD----ELENL 583
           E               Q  + V  +  S+        F II C  +  +P      LE +
Sbjct: 661 EIPNISGLPNLEEFSIQNGEKVIAIDKSIGFLGKLKIFRIISCAEIRSVPPLSLASLEEI 720

Query: 584 EYLTVKGTTIRELPESLGR-LSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           E+      ++   P  + R L  +K L + N + ++ IP  I  L  L  L +S C  L+
Sbjct: 721 EF--SHCYSLESFPLMVNRFLGKLKILRVINCTKIKIIPSLI--LPSLEELDLSDCTGLE 776

Query: 643 TLPELPCNLG----LLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDG 698
           + P L    G     +S R C ++  +P  +  ++S+  ++L + + L   E   IV+DG
Sbjct: 777 SFPPLVDGFGDKLKTMSVRGCINIRSIPTLM--LASLEELDLSDCISL---ESFPIVEDG 831


>gi|297804918|ref|XP_002870343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316179|gb|EFH46602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 966

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 198/610 (32%), Positives = 303/610 (49%), Gaps = 60/610 (9%)

Query: 72  FFYRVDPSHVRKQSHSFGRHFSRLRK-RFPEKMKRWKNALTEAADLSGFDSNVIRPESKL 130
            FY V+PS VR Q  +F     R +     + +  W+ ALT  A+  G DS     E+ +
Sbjct: 14  IFYGVNPSDVRNQRGNFA--LERYQGLEMADTVLGWREALTRIANRKGKDSTQCEDEATM 71

Query: 131 IEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCI-GSEGVCKLRIWGIGGISKIT 189
           IE+I   +  RL +        +VG++  +E +  LL +  ++ V  + IWG+GGI K T
Sbjct: 72  IEDIVRRISSRLLSMLPIDFGDIVGMKTHVEGLSPLLNMDANDEVRMIEIWGMGGIGKTT 131

Query: 190 IAGAVFNKISRHFEGSY-FALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQL-- 244
           IA  ++ +    F   + F  NVR+     G+  LQ+KL+S +  + +++  ++E     
Sbjct: 132 IAKYIYEQYKHRFSPHFCFIPNVRKISSKHGLLYLQEKLISNILGEEHVKLWSVEQGAHC 191

Query: 245 --NRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANK--KY 284
             +RL   KV IV DDV                  GSR+I+TTRDK +L N    +   Y
Sbjct: 192 IKSRLGHLKVFIVLDDVDDVNQLYALAKEAKWFGLGSRIIVTTRDKSLLNNFCGVRIFVY 251

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHI--ELTDKAIKYAQGVPLALKVLGCYLCGRSK 342
            +K +   +A KLF Q AF G H   SH+  +L+++  + AQG+PLAL+  G YL G+S 
Sbjct: 252 DVKCMDNDNAIKLFEQVAFEGGH-PPSHVYKDLSNRVSRLAQGLPLALEAFGFYLHGKSL 310

Query: 343 EVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD--- 399
             W+  ++  E  P+  I  +LKISYD+LD+  K  FL +AC   G+    V ++ D   
Sbjct: 311 MEWKDGLKSFEEAPYENIMSILKISYDNLDELGKTAFLHVACLFNGDPVLRVTTLLDCGR 370

Query: 400 ------ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
                   KSLI++     I MH L+   GR IV +ES N P K+  LWH  DIY+VL  
Sbjct: 371 FGIRDLVEKSLIDISTDGCIAMHGLVEQTGRHIVCQESGNRPAKQRILWHPDDIYRVLAN 430

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY----GDKNKCMVSHLEGVPF 509
             GT  IEG++LD+  +    H+   A   M  L+FL+ Y    G +++ +  +LE  P 
Sbjct: 431 YAGTRKIEGVALDVCVLPYSFHIEWNALEPMYNLKFLKIYKHSKGSESR-IRRNLEENPI 489

Query: 510 A--EVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITF 565
              ++R L W      TL   +  + LV L +  +K+  LW  V RL        T    
Sbjct: 490 VSRKLRLLHWDAYSYTTLPSKVSPDCLVELNLCYSKLTSLWSGVPRLLHLRRLDLT---- 545

Query: 566 EIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPE 622
               C+ L+ LPD  E   LE L ++G  +++ +P+S+  LS VK+L +SN   L+ +  
Sbjct: 546 ---GCEDLKELPDLHEAVCLEELILEGCISLQRIPKSIWGLSRVKKLDVSNCDGLKNLRI 602

Query: 623 SIRHLSKLTF 632
            +R      F
Sbjct: 603 ILRESESTVF 612



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 583 LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
           L  L +    I E+P+ +  +  +++L LS N     +P ++  L+ L  L + +C RL+
Sbjct: 723 LRDLNLINLNIEEIPDDIHHMMVLEKLDLSGNG-FRVLPTTMILLTNLKHLTLCNCCRLE 781

Query: 643 TLPELPCNLGLLSARNCTSLEKL 665
           TLP+L   L  L+  +CT+L+ L
Sbjct: 782 TLPDL-YQLETLTLSDCTNLQAL 803


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 207/619 (33%), Positives = 312/619 (50%), Gaps = 90/619 (14%)

Query: 187 KITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQL 244
           K TIA A++N+IS  ++GS F  N+RE  + G I  LQK+LL  + K    R  N++  +
Sbjct: 22  KTTIAKAIYNEISYQYDGSSFLRNMRERSK-GDILQLQKELLHGILKGKGFRISNVDEGV 80

Query: 245 NRLAR----KKVRIVF---DDVTS-------------GSRVIITTRDKQVLKNCWANKKY 284
           N + R    K+V ++F   DD+T               S +IIT+RDKQVL +   +  Y
Sbjct: 81  NMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLAHYGVHISY 140

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
            + +    +A +LF  WAF  +    ++  L+   I+YA G+PLALK+LG  L G+    
Sbjct: 141 EVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKKISE 200

Query: 345 WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE-----------GEHRDE 393
           WESA+ KL+ IPH+EI +VL+IS+D LDD  K +FLD+ACF +           G H + 
Sbjct: 201 WESALYKLKRIPHMEINKVLRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRILGPHAEY 260

Query: 394 VISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKK 453
            I+  +  K LI +     I MHDL++ MGREI+R+E     G+R+R+W   D Y VL +
Sbjct: 261 GIATLN-DKCLITISK-NMIDMHDLIQQMGREIIRQECPEDLGRRSRVW-DSDAYHVLTR 317

Query: 454 NTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVR 513
           N GT AIEG+ LD+ K +  I     +F +M +LR L+ +      ++S      F E++
Sbjct: 318 NMGTRAIEGLFLDICKFD-PIQFAKESFKQMDRLRLLKIHKGDEYDLISLKR---FPEIK 373

Query: 514 HLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKM- 572
                            KL  L +  T        ++ LPSSL  F+     EI+  +M 
Sbjct: 374 G-------------NMRKLRELDLSGTA-------IKVLPSSL--FEHLKALEILSFRMS 411

Query: 573 --LERLPDE---LENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIR 625
             L ++P +   L +LE L +    I E  +P  +  LS +K L L +N +   IP +I 
Sbjct: 412 SKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSN-DFRSIPATIN 470

Query: 626 HLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYV-NLCNFL 684
            LS+L  L +SHC+ LQ +PELP +L LL A             SS +S L V +L N  
Sbjct: 471 QLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNP-------TSSRASFLPVHSLVNCF 523

Query: 685 KLDPNELSEIVKDG-WMKHSL--YEERGIKKSMYFPGNE-IPKWFRHQSMGSSATLKTRP 740
             +  +L+   ++  W ++S+  Y  +GI   +  PG+  +P+W     M         P
Sbjct: 524 NSEIQDLNCSSRNEVWSENSVSTYGSKGI--CIVLPGSSGVPEWI----MDDQGIATELP 577

Query: 741 PRPAGYNKLISFAFCAVVV 759
                 N+ + FA C V V
Sbjct: 578 QNWNQNNEFLGFALCCVYV 596



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 147/356 (41%), Gaps = 82/356 (23%)

Query: 547  DDVQRLPSSLCTFKTPITFEIIDCKMLERLPDEL---ENLEYLTVK-------------- 589
            +++  LP S+C   +  T  ++ C  L +LP+ L   ++LEYL VK              
Sbjct: 866  ENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSG 925

Query: 590  ----------GTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
                         +RE+P  +  LS ++ L L  N     IP+ I  L  L    +SHC+
Sbjct: 926  LCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGN-RFSSIPDGINQLYNLIVFDLSHCQ 984

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
             LQ +PELP +L  L A  C+SLE     LSS S++L+ +L    K    E         
Sbjct: 985  MLQHIPELPSSLEYLDAHQCSSLEI----LSSPSTLLWSSLFKCFKSRIQEF-------- 1032

Query: 700  MKHSLYEERGIKKSMYFPG-NEIPKWFRHQSMGSSATLKTRPPRPAGYN-KLISFAFCAV 757
                   E   K  M+ PG N IP W  HQ  GS  T+  R PR    N   + FA C++
Sbjct: 1033 -------EVNFKVQMFIPGSNGIPGWISHQKNGSKITM--RLPRYWYENDDFLGFALCSL 1083

Query: 758  VVFPAFLKYFRHKSGEDDWDGNVYAVCCDW--KRKSEGHLYS------WFL----GKISY 805
             V     +  R    + +++   + +  D+  KR  E  L+       W +     KI  
Sbjct: 1084 HVPLDIEEENRSFKCKLNFNNRAFLLVDDFWSKRNCERCLHGDESNQVWLIYYPKSKIPK 1143

Query: 806  VESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                + +   N+   EYFG                    E  +V++CG HF+YAQ+
Sbjct: 1144 KYHSNEYRTLNTSFSEYFGT-------------------EPVKVERCGFHFIYAQE 1180



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 28/128 (21%)

Query: 577 PDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE-------------- 622
           P EL+ L     K  T++ LP S+     +  L  S  S LE  PE              
Sbjct: 783 PSELDGLCLRDCK--TLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLD 840

Query: 623 ---------SIRHLSKLTFLFISHCERLQTLPELPCNLG---LLSARNCTSLEKLPAGLS 670
                    SI+ L  L +L +++CE L  LPE  CNL     L   +C  L KLP  L 
Sbjct: 841 GTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLG 900

Query: 671 SMSSVLYV 678
            + S+ Y+
Sbjct: 901 RLQSLEYL 908


>gi|5823587|emb|CAB53785.1| disease resistance protein RPS4-Ler [Arabidopsis thaliana]
          Length = 1217

 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 227/793 (28%), Positives = 352/793 (44%), Gaps = 112/793 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG D R  F SHL   L L +I  FIDD   RG  +   LL  IE S I + I
Sbjct: 16  HQVFINFRGADLRRRFVSHLVTALKLNNINVFIDDYEDRGQPLD-VLLKRIEESKIVLAI 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  Y  S W                      FY+++PS VR     FG  F  + K   
Sbjct: 75  FSGNYTESVWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKGKFGDRFRSMAKG-D 133

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA------------TFQS 148
           E+ K+WK A     ++ G   +    ES+ + EI   V   L                 +
Sbjct: 134 ERKKKWKEAFNLIPNIMGIIIDKKSVESEKVNEIVKAVKTALTGIPPEGSHNAVVGALGN 193

Query: 149 KNKGL---------VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKI 198
            N G           G E  ++++E  L     +G   + + G+ GI K T+   ++   
Sbjct: 194 SNAGTSSGDKKHETFGNEQRLKDLEEKLDRDKYKGTRIIGVVGMPGIGKTTLLKELYKTW 253

Query: 199 SRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGN--MRNIESQLNRLARKKVRIVF 256
              F        +R   +   +  L + LL ELSK  N  + N++   ++L  +KV +V 
Sbjct: 254 QGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLNNPHVDNLKDPYSQLHERKVLVVL 313

Query: 257 DDVT-------------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
           DDV+                    GSRV+I T D   L N   +  Y ++ L + D+ +L
Sbjct: 314 DDVSKREQIDALREILDWIKEGKEGSRVVIATSDMS-LTNGLVDDTYMVQNLNHRDSLQL 372

Query: 298 FCQWAFGGDHLDASH---IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
           F   AF  D  +      ++L++  + YA+G PLALKVLG  L  +S + W S M+KL  
Sbjct: 373 FHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSMDHWNSKMKKLAQ 432

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-----------KS 403
            P   I  V ++SYD L  +QK+ FLDIACF   + +D V S+  +S           KS
Sbjct: 433 SPSPNIVSVFQVSYDELTTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKS 491

Query: 404 LINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKKN 454
           L +  L      R+ MHDLL    RE+  K S     ++ RLW H+ I +     VL+  
Sbjct: 492 LTDKFLINTCDGRVEMHDLLYKFSREVDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNK 551

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEG 506
                + GI LD+++V  E  ++   F  M  LR+L+FY           NK  +     
Sbjct: 552 MKAANVRGIFLDLSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLK 611

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
           +P  EVR L W + PL+TL  +     LV LK+P ++ EQLW+  +  P   C     + 
Sbjct: 612 LPLKEVRCLHWLKFPLETLPNDFNPINLVDLKLPYSETEQLWEGDKDTP---CLRWVDLN 668

Query: 565 FEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                C +      + E L+ L ++G TT++  P  + ++  +  L L   ++LE +PE 
Sbjct: 669 HSSKLCSLSGL--SKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE- 725

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--C 681
             +L  L  L +S C   +  P +  N+  L   + T++ +LP  +  +  ++ +N+  C
Sbjct: 726 -MNLISLKTLTLSGCSTFKEFPLISDNIETLYL-DGTAISQLPMNMEKLQRLVVLNMKDC 783

Query: 682 NFLKLDPNELSEI 694
             L+  P  + E+
Sbjct: 784 KMLEEIPGRVGEL 796



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 177/441 (40%), Gaps = 93/441 (21%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC-PLKTLNICAEKLVSLKMPCTKV 542
            M K++ L F   K    +  L  +    ++ L    C   K   + ++ + +L +  T +
Sbjct: 703  MKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAI 762

Query: 543  EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT--------------- 587
             QL       P ++   +  +   + DCKMLE +P  +  L+ L                
Sbjct: 763  SQL-------PMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPE 815

Query: 588  ----------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
                      + GT I  +P+    L  V+ L LS N+ +  +P  I  LS+L +L + +
Sbjct: 816  IDISFLNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM-------SSVLYVNLCNFLKLDPNE 690
            C  L ++PE P NL  L A  C+SL+ +   L+ +       S+ ++ N  N  +    E
Sbjct: 872  CTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQAAKEE 931

Query: 691  LSEIVKDGWMKHSLYEERG----IKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            ++   +      S   +R     + +S++   FPG E+P WF H+++GS   +K  P   
Sbjct: 932  ITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWH 991

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLY------ 796
                KL   A CAV+            S  D  D  +  +V C +K K E   +      
Sbjct: 992  D--KKLAGIALCAVI------------SCLDPQDQVSRLSVTCTFKVKDEDKSWVPYTCP 1037

Query: 797  --SWFL--GKISYVESDHVFLG---------CNSFGG-EYFGPNYDEFSFRIHCSFHFPP 842
              SW    G    +E DHVF+G         C+  G  +   P      F +        
Sbjct: 1038 VGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNSDECNPTEASLKFTVTGGTS--- 1094

Query: 843  YLERGEVK--KCGIHFVYAQD 861
              E G+ K  KCG+  VYA+D
Sbjct: 1095 --ENGKYKVFKCGLSLVYAKD 1113


>gi|357468447|ref|XP_003604508.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505563|gb|AES86705.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 806

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 226/708 (31%), Positives = 346/708 (48%), Gaps = 107/708 (15%)

Query: 127 ESKLIEEIANDVLKRLDATFQS--KNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGG 184
           ++ L+EEI   VL RL     S   +K LVG++  I ++ SLL   SE V  + IWG+GG
Sbjct: 42  DAVLVEEITKVVLMRLSELKNSPVNSKELVGIDKPIADLNSLLKKESEQVRVIGIWGMGG 101

Query: 185 ISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQL 244
           I K TIA  +F++    ++G  F   V E  +T G     K+ L       +++ +   +
Sbjct: 102 IGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKTPGGVGCLKESLLSELLKESVKELSGDI 161

Query: 245 NR-LARKKVRIVFDDV----------------TSGSRVIITTRDKQVLKN--CWANKKYR 285
            R ++R KV IV DDV                 S SR+I+T+RDKQVL+N     +  Y 
Sbjct: 162 KRRISRMKVLIVLDDVKETDQLEMLFGTLDWFQSDSRIILTSRDKQVLRNNEVEDDDIYE 221

Query: 286 MKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVW 345
           +  L  ++A  LF   AF   HL+  + EL+   + YA+G+PL LKVL   L G+ KEVW
Sbjct: 222 VGVLDSSEALVLFNSNAFKQSHLEMEYYELSKSVVNYAKGIPLVLKVLAHMLRGKKKEVW 281

Query: 346 ESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEG-----EHRDEVISIFDA 400
           ES + KL  +P  ++ + +++SYD LD  ++  FLDIACF  G     ++   ++   D+
Sbjct: 282 ESQLDKLRRLPVQKVYDAMRLSYDDLDRLEQKYFLDIACFFNGLDLKVDYMKHLLKDCDS 341

Query: 401 ------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIY 448
                        K+LI +     I MHD+L++MG EIVR+ES +  GKR+RLW+  +IY
Sbjct: 342 DNYVAGGLETLKDKALITISEDNVISMHDILQEMGWEIVRQES-SDLGKRSRLWNPDEIY 400

Query: 449 QVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVP 508
            VLK + GT AI  ISL                   P +R L+            L+  P
Sbjct: 401 DVLKNDKGTNAIRSISL-------------------PTMRELKL----------RLQSFP 431

Query: 509 FAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------ 554
              +++L W  CPLK+      A+ LV L +  + VE+LW  VQ L +            
Sbjct: 432 LG-IKYLHWTYCPLKSFPEKFSAKNLVILDLSDSLVEKLWCGVQDLINLKEVRLSYSMLL 490

Query: 555 -SLCTFKTPITFEIID---CKMLERL-PD--ELENLEYLTVKGTTIRELPESLGRLSWVK 607
             L  F   I  ++++   C  L+ + P    L  LE L +    I  LP S G    ++
Sbjct: 491 KELPDFSKAINLKVLNISSCYQLKSVHPSILSLNRLEQLGLSWCPINALPSSFGCQRKLE 550

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL-- 665
            L+L   S++E IP SI++L++L  L I  C +L  LPELP ++  L  ++  SL+ +  
Sbjct: 551 ILVL-RYSDIEIIPSSIKNLTRLRKLDIRGCLKLVALPELPSSVETLLVKDSFSLKTVLF 609

Query: 666 PAGLSSM-----SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMY-FPGN 719
           P+ ++        SV + N  N   LD + L  +  +  +    Y   G  ++MY +PG+
Sbjct: 610 PSTVAEQFKENKKSVEFWNCEN---LDESSLINVGLNVQINLMKYANFGSDEAMYVYPGS 666

Query: 720 EIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYF 767
            IP+W  +++      +    PR    + L+ F FC  +VFP  L  F
Sbjct: 667 SIPEWLEYKTTKDDMIIDLSQPR---LSPLLGFVFC--IVFPKCLLNF 709


>gi|298228728|dbj|BAJ09394.1| TuMV resistance-like protein [Brassica rapa subsp. chinensis]
          Length = 829

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 195/563 (34%), Positives = 299/563 (53%), Gaps = 74/563 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R NF SH+   L  K I  FID+ + R  +I   L+  I+ S +AI++
Sbjct: 17  FDVF-SFHGADVRKNFLSHVLIELKSKGIDVFIDNDIRRSKSIGPFLIDAIKGSRVAIVL 75

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            SE YASS W                      FY+VDPS V+KQ+  FG+ F ++ K + 
Sbjct: 76  LSEDYASSTWCLNELVEIMKCRREFGQTVMPIFYQVDPSDVKKQTGEFGKVFQKICKGKT 135

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ-SKNKGLVGVEC 158
            EK++RWK ALTE A+++GF S+  + E+++IE+IA  +  +L+ +   S   GLVG+E 
Sbjct: 136 EEKIRRWKEALTEVANIAGFHSSNWKSEAEMIEKIATKISNKLNLSVPCSYCDGLVGIES 195

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE---GSYFALNVREAE 215
            + E+ SLL +  + V K+ I G+ GI K TIA +++N+  ++F+   G  F  N  +  
Sbjct: 196 HMTEMRSLLSLDCDEVRKVGILGMAGIGKTTIARSLYNRHCQNFQRFDGCCFLSNEIDEL 255

Query: 216 ETGGIKDLQKKLLSELSKDGNMRNIESQL-------NRLARKKVRIVFDDVTS------- 261
           +  GI D  ++ L     D     + + L       +RL  KK+ IV D+V +       
Sbjct: 256 KLQGI-DQLQQKLLIKLLDDETLEVGASLGAHKVLKDRLLNKKLFIVLDNVDNKQISLLI 314

Query: 262 ----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDAS 311
                     GSR+IITTRDK++L     +  Y +  L   +A +LFC  AFG  +    
Sbjct: 315 GEAGKQLYRDGSRIIITTRDKKLLDKV-VDGTYVVPRLNGREALELFCSKAFGNHYPTEE 373

Query: 312 HIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
            ++L++  + YA+G+PLALK+LG  L       W+  +  L++ P  E+++ LK SY +L
Sbjct: 374 FVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKAL 433

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIF-----DASKSLINLD-------LFYRIRMHDLL 419
           DD QK+VFLDIACF   E  D V SI      DA   +  L+        + RI MHDLL
Sbjct: 434 DDDQKSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVMISYDRIEMHDLL 493

Query: 420 RDMGREIVRKESINHPGKRNRLWHHKDIYQVLK---KNTGTEAIEGISLDMNKVNREIHM 476
             MG+EI +++SI   G+R RL + + +  +L     N+G+E ++G    +N++ + I  
Sbjct: 494 HAMGKEIGKEKSIRKAGERRRLSNCELLLDILSLLFANSGSECLKGDFKALNEI-KAIKG 552

Query: 477 NSYAFSKM-----PKLRFLRFYG 494
              AFS +         FL+F+G
Sbjct: 553 FPAAFSMLGDDPCGDGDFLKFHG 575


>gi|13509229|emb|CAC35334.1| N2-D protein [Linum usitatissimum]
          Length = 1108

 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 224/758 (29%), Positives = 350/758 (46%), Gaps = 109/758 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           Y++FLSFRG D R  F  HL+  L     +TF D++ +R G  I  S++  I  S I I 
Sbjct: 31  YEIFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGTIGPSIIRAITESKIYIP 90

Query: 61  IFSERYASSRW--------------------------FFYRVDPSHVR-KQSHSFGRHFS 93
           I +  YASS+W                           F  VDP  VR  +S S+   F 
Sbjct: 91  ILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSYKEAFE 150

Query: 94  R-LRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
              +K  PE +  WK AL E   + G+          +I++I  +V   L A +      
Sbjct: 151 EHSQKHDPETVLEWKEALQEVGKMKGYHVTESDGHGSIIDKILTEVELHLGANYTLVTDE 210

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  ++E+  LL + S    K+  I G+GG+ K T+A AV++K+S  FE  YF  N+
Sbjct: 211 LVGIDSHVDEVVRLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENI 270

Query: 212 REAE-ETGGIKDLQKKLLSE-LSKDGN-MRNIESQL----NRLARKKVRIVFDDV----- 259
           R+   E  G+  LQ K++S  L KD N  +N    +    +R+ R K+ IV DDV     
Sbjct: 271 RDTLLEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQ 330

Query: 260 -----------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                      ++ SR +ITTRD + L+     K + ++E+    +  LF + AFG D  
Sbjct: 331 FDDVLGKFENFSTDSRFLITTRDVRGLELLRECKMFELQEMSPDHSLTLFNKHAFGVDSP 390

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              +  L+    + A G+PL +KV+G  L    K  WE  + +L+ I   +++E LKISY
Sbjct: 391 QEDYAILSKDFSQPAAGLPLYIKVIGSLLYRMDKIFWEEKLEELKKISPTKVQERLKISY 450

Query: 369 DSLDDSQKNVFLDIAC-FLEGEHRDEVISIFD------------ASKSLINL-------- 407
           + L  +++ +FLD AC F+E      ++   D              +SLI L        
Sbjct: 451 NELTHTERQIFLDXACYFIESFKIGPMLMWNDCDFYSESTIRSLTQRSLIKLQKPYIKGA 510

Query: 408 --DLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL 465
             D+F+   MHD +RD+GR IVR+E   +P KR+R+W +KD   +LK   GT+ +E + +
Sbjct: 511 DIDMFW---MHDHVRDLGRAIVREEKNQNPYKRSRIWSNKDAVDMLKHKKGTDWVEILEV 567

Query: 466 DMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL 525
           DM     +  +    F K+ +LR+L+     N  +    + V    +R L    C     
Sbjct: 568 DMK--FEDFMLTDKEFEKLTRLRYLKV---SNGRLAGDFKDV-LPNLRWLRLKSCDSIPT 621

Query: 526 NICAEKLVSLKMPCTKVEQLWDDVQRLP--------SSLCTFKTPITFEIIDCKMLERLP 577
            +  +KLV+L++    V   W     L         S    F      +  DC+ LE L 
Sbjct: 622 GLYLKKLVTLQLVDCSVRDGWKGWNELKVARKLKAVSLKRCFHLKKVPDFSDCEDLECLD 681

Query: 578 DE-------------LENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESI 624
            E              ++L YL +  T I ++   +GRL  +K L L+++S+L+ +P  I
Sbjct: 682 FEECRNMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLLNLKYL-LASDSSLKEVPAGI 740

Query: 625 RHLSKLTFLFISHCERLQT--LPELPCNLGLLSARNCT 660
             LS L  L ++  +  ++     LP +L LL   N T
Sbjct: 741 SKLSSLKNLSLALIDPYKSDFTEMLPASLTLLYISNDT 778


>gi|1842251|gb|AAB47618.1| rust resistance protein M [Linum usitatissimum]
          Length = 1305

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 227/757 (29%), Positives = 351/757 (46%), Gaps = 115/757 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR   T  L+  L    I TF DD +L +G+ I  +LL  I+ S I + 
Sbjct: 76  YDVFLSFRGPDTRYQITDILYRFLCRSKIHTFKDDDELHKGEEIKVNLLRAIDQSKIYVP 135

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDP  VR Q+  + + F +   R
Sbjct: 136 IISRGYADSKWCLMELAKIVRHQKLDTRQIIIPIFYMVDPKDVRHQTGPYRKAFQKHSTR 195

Query: 99  FPE-KMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           + E  ++ WKNAL E   L G+       +  + +E++ ++   +    F  +   LVG+
Sbjct: 196 YDEMTIRSWKNALNEVGALKGWHVKNNDEQGAIADEVSANIWSHISKENFILETDELVGI 255

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  +E I  +L + S+ V  + ++G+GGI K T A AV+NKIS HF+   F  NVR  +E
Sbjct: 256 DDHVEVILEMLSLDSKSVTMVGLYGMGGIGKTTTAKAVYNKISSHFDRCCFVDNVRAMQE 315

Query: 217 T-GGIKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDVT------- 260
              GI  LQKKL+SE+        + D   R +  +  R+++ K+ +V DDV        
Sbjct: 316 QKDGIFILQKKLVSEILRMDSVGFTNDSGGRKMIKE--RVSKSKILVVLDDVDEKFKFED 373

Query: 261 ---------SGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDHLD 309
                    SG+R IIT+R++ VL     N  K Y +  +    + +LF + AF  +   
Sbjct: 374 ILGCPKDFDSGTRFIITSRNQNVLSRLNENQCKLYEVGSMSEQHSLELFSKHAFKKNTPP 433

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKISY 368
           + +  L +  +    G+PL LKV G +L  +   VWE  + +L + +   E+ + LKISY
Sbjct: 434 SDYETLANDIVSTTGGLPLTLKVTGSFLFRQEIGVWEDTLEQLRKTLDLDEVYDRLKISY 493

Query: 369 DSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIR-------------M 415
           D+L    K +FLDIACF  G +++    ++   K     ++ + I+             M
Sbjct: 494 DALKAEAKEIFLDIACFFIGRNKEMPYYMWSECKFYPKSNIIFLIQRCMIQVGDDGVLEM 553

Query: 416 HDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV----- 470
           HD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+  N +     
Sbjct: 554 HDQLRDMGREIVRREDVQRPWKRSRIWSREEGIDLLLNKKGSSQVKAISIPNNMLYAWES 613

Query: 471 NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPL-------- 522
             +    S  F  + +LR   F G       + L G     + +L+W   P         
Sbjct: 614 GVKYEFKSECFLNLSELRLF-FVGS-----TTLLTGDFNNLLPNLKWLDLPRYAHGLYDP 667

Query: 523 KTLNICAEKLVSL-------------KM-PCTKVEQLWDDV---QRLPSSLCTFKTPITF 565
              N   +KLV L             KM P  KV +L+ D    QRL  S C ++ P + 
Sbjct: 668 PVTNFTMKKLVILVSTNSKTEWSHMIKMAPRLKVVRLYSDYGVSQRL--SFC-WRFPKSI 724

Query: 566 EIIDCKMLE-RLPD--ELENLEYLTVKGTTIRELP-ESLGRLSWVKRLILSN--NSNLER 619
           E++    +E +  D  EL+NL+ L +    I+++   + G L  +  L L +   +NL  
Sbjct: 725 EVLSMSGIEIKEVDIGELKNLKTLDLTSCRIQKISGGTFGMLKGLIELRLDSIKCTNLRE 784

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA 656
           +   I  LS L  L     + +Q   E P  L  LS 
Sbjct: 785 VVADIGQLSSLKVLKTEGAQEVQF--EFPLALKELST 819


>gi|15238668|ref|NP_197290.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005098|gb|AED92481.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1197

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 220/830 (26%), Positives = 364/830 (43%), Gaps = 170/830 (20%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
           VF++FRG + R NF SHL   L  K I  FID     G  +S  LL  IE S IA+ IFS
Sbjct: 19  VFINFRGVELRKNFVSHLEKGLKRKGINAFIDTDEEMGQELS-VLLERIEGSRIALAIFS 77

Query: 64  ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
            RY  S+W                      FY+V P  V++    FG  F  L K   +K
Sbjct: 78  PRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQPVTVKELKGDFGDKFRELVKSTDKK 137

Query: 103 MKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG--------- 152
            K+ WK AL     L+G    ++  E    +E+ N +++++      +++G         
Sbjct: 138 TKKEWKEALQYVPFLTG----IVLDEKSDEDEVINIIIRKVKEILNRRSEGPPSKCSALP 193

Query: 153 ----------LVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRH 201
                       G+E  I+++E  L  GS+   + + + G+ GI K T+A  ++ K +  
Sbjct: 194 PQRHQKRHETFWGIELRIKQLEEKLRFGSDETTRTIGVVGMPGIGKTTLATMLYEKWNDR 253

Query: 202 FEGSYFALNVREAEETGGIKDLQKKLLSELSK--DGNMRNI----ESQLNRLARKKVRIV 255
           F       ++ EA E  G+  L  K L  L K  + N+ ++    E+  ++L   KV ++
Sbjct: 254 FLRHVLIRDIHEASEEDGLNYLATKFLQGLLKVENANIESVQAAHEAYKDQLLETKVLVI 313

Query: 256 FDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFC 299
            D+V++                GS+++ITT DK ++     N  Y +  L   DA K F 
Sbjct: 314 LDNVSNKDQVDALLGERNWIKKGSKILITTSDKSLMIQSLVNDTYEVPPLSDKDAIKHFI 373

Query: 300 QWAFGGDHLDA------SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE 353
           ++AF G+   A      +  +L+   + Y +G PLAL++LG  L G+ +  W   +  L+
Sbjct: 374 RYAFDGNEGAAPGPGQGNFPKLSKDFVHYTKGNPLALQMLGKELLGKDESHWGLKLNALD 433

Query: 354 ----IIPHVEI----EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA----- 400
                 P   I    + V + SY +L   +K+  LDIACF   +  + V S+ D+     
Sbjct: 434 QHHNSPPGQSICKMLQRVWEGSYKALSQKEKDALLDIACF-RSQDENYVASLLDSDGPSN 492

Query: 401 ------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKN 454
                 +K +IN+    ++ MHD L  + +E+ R+ +      R+RLWHH  I  VL KN
Sbjct: 493 ILEDLVNKFMINI-YAGKVDMHDTLYMLSKELGREATATDRKGRHRLWHHHTIIAVLDKN 551

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD------KNKCMVSHLEG-- 506
            G   I  I LD++ + R+     +AF+ M  LR+L+ Y        ++   ++  EG  
Sbjct: 552 KGGSNIRSIFLDLSDITRKWCFYRHAFAMMRDLRYLKIYSTHCPQECESDIKLNFPEGLL 611

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP----------- 553
           +P  EVR+L W + PLK +  +     LV LK+P +++E++W+D +  P           
Sbjct: 612 LPLNEVRYLHWLKFPLKEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSK 671

Query: 554 -----SSLCTFKTPITFEIIDCKMLERLPDELENLEYLT--------------------- 587
                + L   +      +  C  L+ +  ++EN+++L                      
Sbjct: 672 KLNTLAGLGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISL 731

Query: 588 -------------------------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPE 622
                                    + GT I+ELP  +GRL  +  L +     L+R+P+
Sbjct: 732 KTLILSGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPD 791

Query: 623 SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLS 670
           S+  L  L  L +S C +L   PE   N+  L     + T+++ +P  LS
Sbjct: 792 SLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKILS 841



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 196/461 (42%), Gaps = 90/461 (19%)

Query: 457  TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE 516
             + ++ ++L+     +E+H++      M  ++FL F   +    +  L  +    ++ L 
Sbjct: 682  AQNLQELNLEGCTALKEMHVD------MENMKFLVFLNLRGCTSLKSLPEIQLISLKTLI 735

Query: 517  WPQCP-LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLER 575
               C   KT  + ++KL +L +  T +++L  D+ RL       +  +   +  CK L+R
Sbjct: 736  LSGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRL-------QRLVMLNMKGCKKLKR 788

Query: 576  LPD---ELENLEYLTVKG-TTIRELPESLGRLS-------------------WVKRLILS 612
            LPD   +L+ LE L + G + + E PE+ G +S                    V+RL L+
Sbjct: 789  LPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKILSVRRLCLN 848

Query: 613  NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
             N  + R+P+ +   S+L +L + +C+ L  +P+LP NL  L+   C+SL+ +   L   
Sbjct: 849  KNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLVCS 908

Query: 673  SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER-------GIKK-----------SM 714
              + +VN  +F+  + NEL +  K+  +   +Y ER        +K+             
Sbjct: 909  IPMKHVN-SSFIFTNCNELEQAAKEEIV---VYAERKCHLLASALKRCDESCVPEILFCT 964

Query: 715  YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGED 774
             FPG E+P WF H ++GS    +  PP    +N+L   A C VV F         K+ + 
Sbjct: 965  SFPGCEMPSWFSHDAIGSMVEFEL-PPH-WNHNRLSGIALCVVVSF---------KNCKS 1013

Query: 775  DWDGNVYAVCCDWKRKSEGHLYSWFLGKI-------SYVESDHVFLG---CNSF------ 818
              +  V   C     +      +W +G +         VESDHVF+G   C  F      
Sbjct: 1014 HANLIVKFSCEQNNGEGSSSSITWKVGSLIEQDNQEETVESDHVFIGYTNCLDFIKLVKG 1073

Query: 819  -GGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVY 858
             GG    P      F +         L   EV K G  FV+
Sbjct: 1074 QGGPKCAPTKASLEFSVRTGTGGEATL---EVLKSGFSFVF 1111


>gi|13517464|gb|AAK28803.1|AF310958_1 resistance-like protein P1-A [Linum usitatissimum]
          Length = 1200

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 224/766 (29%), Positives = 354/766 (46%), Gaps = 167/766 (21%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG+DTRD FTSHL   LS K I+ FID++L + ++I + L+  ++   +++++
Sbjct: 23  YDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESIDE-LISILQRCPLSVVV 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSER+A S W                      FY+VDPS V+ +SH  G           
Sbjct: 82  FSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGP---------- 131

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVECS 159
              KRW +AL   A  +G  S  I+ ES+LI+ +   V K+L     S N+  LV +   
Sbjct: 132 ---KRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSR 188

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE-AE 215
           I E+E LL +   +  C + +WG+GG+ K T+A A +++++   +G    F  NV E  E
Sbjct: 189 IFEVERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCE 248

Query: 216 ETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV------------ 259
           +  G+  +  KL S+L  + N+     NI  +  RL+R +V +V D+V            
Sbjct: 249 KHHGVDKIVHKLYSKLLDENNIDREDLNIAYRRERLSRLRVFVVLDNVETLEQLEKLALG 308

Query: 260 ---------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D    
Sbjct: 309 YVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDKESIRLFSLHAFKQDRPQD 367

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           + +  +  A  Y +G PLALK+LG  L       W+S +  L    ++ +E +L+ SYD 
Sbjct: 368 NWMGKSRLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLRQSGNLGMETILRRSYDK 427

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY--------RIR 414
           L   +K +F+D+AC L G  R  +I    +++ +S    K LI+  L           I 
Sbjct: 428 LGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSENGEMIE 487

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL----------------------- 451
           +HDLL++M   IV++E     GKR+RL    D++++L                       
Sbjct: 488 VHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKSWSTSIVNLFKGIVMVI 545

Query: 452 ---KKNTGTE-------------AIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF--- 492
              K+   T+               EGI LD++   +E+++ + AF  M  L FL+F   
Sbjct: 546 PRRKRRKVTDMHEKGYDPLEEHRTTEGICLDLSG-TKEMYLKANAFEGMNSLTFLKFELP 604

Query: 493 ------YGDKNKCMVSH-----LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPC 539
                 Y  KN     H     L  +P   +R L+W   P K+L      + LV L +  
Sbjct: 605 EIELPRYRLKNVKTKIHLPYDGLNSLPDG-LRWLQWDGYPSKSLPAKFYPQHLVHLIIRD 663

Query: 540 TKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPES 599
           + +++ W+   + P  L      I  ++  C  L  +PD   +L    +     R L E 
Sbjct: 664 SPIQRCWEGYDQ-PQLL----NLIVLDLRYCANLIAIPDISSSLNLEELLLFGCRSLVE- 717

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                               +P  +++L+KL  L ISHC+ L+ LP
Sbjct: 718 --------------------VPSDVQYLTKLVTLDISHCKNLKPLP 743



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 17/203 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LP       T  + E++DC+ L  +P  + NL  L    +  T I+ LP S+  L  
Sbjct: 883  IESLPEISEPMNTLTSLEVVDCRSLTSIPTSISNLRSLRSLYLVETGIKSLPSSIQELRQ 942

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L +  +LE IP SI  LSKL    +S CE + +LPELP NL  L    C SL+ L
Sbjct: 943  LYSIDLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPELPPNLKELDVSRCKSLQAL 1002

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   + Y+N   F    +LD    +E++ +  +  SL    ER ++ S    G+E
Sbjct: 1003 P---SNTCKLWYLNRIYFEECPQLDQTSPAELMANFLVHASLSPSYERQVRCS----GSE 1055

Query: 721  IPKWFRHQSMGSS--ATLKTRPP 741
            +P+WF ++SM     +T+K   P
Sbjct: 1056 LPEWFSYRSMEDEDCSTVKVELP 1078


>gi|358343904|ref|XP_003636035.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355501970|gb|AES83173.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 977

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 187/620 (30%), Positives = 312/620 (50%), Gaps = 108/620 (17%)

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIE------EIESLLCIGSE 172
           + S   + ES LIE+I   V+++L+       +  + + C+         ++SL+   S 
Sbjct: 3   YGSTGTQTESNLIEDITRAVIRKLN------QQSTIDLTCNFIPDENYWSVQSLIKFDST 56

Query: 173 GVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELS 232
            V  + +WG+GGI K T+A A+F ++S  ++GS F   V E  ++ GI     KLL +L 
Sbjct: 57  EVQIIGLWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSHGINYTCNKLLCKLL 116

Query: 233 KDGNMRNIESQLNRLARKKVR-----IVFDDV-----------------TSGSRVIITTR 270
           K+    +    ++ + R++++     IV DDV                  SGS VI+TTR
Sbjct: 117 KEDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIVTTR 176

Query: 271 DKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLAL 330
           DK VL +      Y +K++   ++ ++F   AF        ++EL+ +AI YA+G PLAL
Sbjct: 177 DKHVLISGGIKTIYEVKKMNSRNSLRIFSLNAFDKVSPKDGYVELSKRAIDYARGNPLAL 236

Query: 331 KVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEH 390
           KVLG  L  +S++ W+ A+ KL+ +P+ EI+ + ++S++ LD +++N+FLDIACF +G+ 
Sbjct: 237 KVLGSLLRCKSEKEWDCALDKLKKMPNNEIDSIFRMSFNELDKTEQNIFLDIACFFKGQE 296

Query: 391 RDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGK 437
           R+ +  I +               K+L+ +D    I+MH L+++MG++IVR+ES+ +PG+
Sbjct: 297 RNSITKILNECGFFADIGISHLLDKALVRVDSENCIQMHGLIQEMGKQIVREESLKNPGQ 356

Query: 438 RNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN 497
           R+RL   +++Y VLK N G+E +E I LD  K    I + S AF KM  LR L     K 
Sbjct: 357 RSRLCDPEEVYDVLKNNRGSEKVEVIFLDATKYTHLI-LRSDAFEKMENLRLLAVQDHKG 415

Query: 498 KCMVSHLEGVPF--AEVRHLEWPQCPLKTLNICA--EKLVSLKMPCTKVEQLWDDVQRLP 553
              +S  +G+      +R++ W   PLKT+ + +  E LV L +  + VE+LW+ V  LP
Sbjct: 416 VKSISLPDGLGLLPENLRYILWDGYPLKTVPLTSSLEMLVELSLKQSHVEKLWNGVVNLP 475

Query: 554 SSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSN 613
           +           EIID    +++      +E   V G+                     N
Sbjct: 476 N----------LEIIDLSGSKKM------IECPNVSGS--------------------PN 499

Query: 614 NSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCN--LGLLSARNCTSLEKLPAGLSS 671
             +LER             L ++ C+ L++L    C+  L  L+  +C +L++     SS
Sbjct: 500 LKDLER-------------LIMNRCKSLKSLSSNTCSPALNFLNVMDCINLKEFSIPFSS 546

Query: 672 MSSVLYVNLCNFLKLDPNEL 691
           +   LY     F + D NEL
Sbjct: 547 VDLSLY-----FTEWDGNEL 561



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 171/430 (39%), Gaps = 77/430 (17%)

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAEVR----HLEWPQCPLKTLNICAEKLVSLKMPCT 540
           P L FL        C+      +PF+ V       EW    L +  +  + L     P +
Sbjct: 524 PALNFLNVM----DCINLKEFSIPFSSVDLSLYFTEWDGNELPSSILHTQNLKGFGFPIS 579

Query: 541 KVEQLWDDVQRLPSSLCT---FKTPITFEIIDCKMLERLPDELENLEYLTVKGTT----- 592
                 D +  LP + C      +P+  E      L+++   L +  +++VK  T     
Sbjct: 580 ------DCLVDLPVNFCNDIWLSSPLNSEHDSFITLDKV---LSSPAFVSVKILTFCNIN 630

Query: 593 -IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
            + E+P S+  LS ++ L L     +  +PE+I++L +L  + + +CE LQ++P L   +
Sbjct: 631 ILSEIPNSISLLSSLETLRLIKMP-IISLPETIKYLPRLIRVNVYYCELLQSIPALQRFI 689

Query: 652 GLLSARNCTSLEKLPAGLS---SMSSVLYVNLCNFLKLDPNELSEIVKD-------GWMK 701
             L   +C SLE++ +  S      + +   L N ++LDP+    ++KD       G  K
Sbjct: 690 PKLLFWDCESLEEVFSSTSEPYDKPTPVSTVLLNCVELDPHSYQTVLKDSMGGIELGARK 749

Query: 702 HSLYEER--GIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
           +S  E+    I      PG E   WF + S   S TL+         + L+ FA+  V+ 
Sbjct: 750 NSENEDAHDHIILIPAMPGME--NWFHYPSTEVSVTLELP-------SNLLGFAYYVVLS 800

Query: 760 --FPAFLKYFRHKSGEDDWDGNVYAVC---------CDWKRKS----EGHLYSWFLGK-- 802
                F   F  +   ++  G    +          CDW   S      HL  W+  +  
Sbjct: 801 QGHMGFDVGFGCECNLENSSGERICITSFKRLNIKKCDWTDTSIDMMSDHLLVWYDPRSC 860

Query: 803 ---ISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYA 859
              +  VE        NS     + P    F+F I  + +     +  E+K+CG  ++Y 
Sbjct: 861 KQIMDAVEQTKAISDGNSTS---YTPKL-TFTFFIDETLY-----DEVEIKECGFRWIYQ 911

Query: 860 QDSADHILKD 869
           +++    + +
Sbjct: 912 EETVSSTISE 921


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 207/640 (32%), Positives = 321/640 (50%), Gaps = 90/640 (14%)

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLR 178
           F + + R ES+ I+ IA  +  +L  T  + +K LVG++  +E +   +         + 
Sbjct: 2   FCTLLCRNESESIKIIAEYISYKLSVTLPTISKKLVGIDSRVEVLNGYIGEEVGEAIFIG 61

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKD--- 234
           I G+GGI K T++  ++++I   FEGS F  NVRE   E  G + LQ++LLSE+  +   
Sbjct: 62  ICGMGGIGKTTVSRVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERAS 121

Query: 235 --GNMRNIESQLNRLARKKVRIVFDDVTSG----------------SRVIITTRDKQVLK 276
              + R IE    RL  KK+ ++ DDV                   SR+IIT+RDK V  
Sbjct: 122 VWDSSRGIEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPRSRIIITSRDKNVFT 181

Query: 277 NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCY 336
                K Y  ++L   DA  LF Q AF  D      +EL+ + + YA G+PLAL+V+G +
Sbjct: 182 GNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSF 241

Query: 337 LCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVIS 396
           L GRS   W  A+ ++  IP  +I +VL+IS+D L +S + +FLDIACFL+G  +D +  
Sbjct: 242 LYGRSIPEWRGAINRMHEIPDCKIMDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITR 301

Query: 397 IFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWH 443
           I D+              +SLI++    ++ MH+LL+ MG+EIVR E    PGKR+RLW 
Sbjct: 302 ILDSCGFNAGIGIPVLIERSLISV-YGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWT 360

Query: 444 HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSH 503
           ++D+   L  NTG E IE I LDM  + +E   N  AFSKM +LR L+     +   +S 
Sbjct: 361 YEDVSLALMDNTGKEKIEAIFLDMPGI-KEAQWNMKAFSKMSRLRLLKI----DNVQLSE 415

Query: 504 LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD--------VQRLP 553
                  E+R LEW   P K+L   +  + LV L M  + +EQLW          V  L 
Sbjct: 416 GPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWYGCKSAVNLKVINLS 475

Query: 554 SSLCTFKTP----------ITFE----------------------IIDCKMLERLPD--E 579
           +SL   KTP          +  E                      +++CK    LP   E
Sbjct: 476 NSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE 535

Query: 580 LENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           +E+L+  T+ G T + + P+ +G ++ +  L L + + +  +  SI HL  L  L +++C
Sbjct: 536 MESLKVFTLDGCTKLEKFPDIVGNMNCLMELCL-DGTGIAELSSSIHHLIGLEVLSMNNC 594

Query: 639 ERLQTLP-ELPC--NLGLLSARNCTSLEKLPAGLSSMSSV 675
           + L+++P  + C  +L  L    C+ L+ +P  L  + S+
Sbjct: 595 KNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESL 634



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 11/136 (8%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKML------ERLPD--ELENLEYLTVKGTTIRE--LPE 598
           +++ P+S+   K+        CK +      +RLP    L +LE L +    +RE  LPE
Sbjct: 644 IRQPPASIFLLKSLKVLSFDGCKRIAVNPTDQRLPSLSGLCSLEVLDLCACNLREGALPE 703

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
            +G LS +K L LS N N   +P SI  L  L  L +  C  L++LPE+P  +  L+   
Sbjct: 704 DIGCLSSLKSLDLSRN-NFVSLPRSINKLFGLETLVLEDCRMLESLPEVPSKVQTLNLNG 762

Query: 659 CTSLEKLPAGLSSMSS 674
           C  L+++P  +   SS
Sbjct: 763 CIRLKEIPDPIKLSSS 778


>gi|13517480|gb|AAK28811.1|AF310966_1 resistance-like protein P-B [Linum usitatissimum]
          Length = 1211

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 224/780 (28%), Positives = 355/780 (45%), Gaps = 180/780 (23%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG DTR  FTSHL   LS K I+TFID +L + ++I + L+  ++   +++++
Sbjct: 21  YDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESIDE-LISILQRCALSVVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR---LRK 97
           FSE++A S W                      FY+VDP  V  +  S+     R    R 
Sbjct: 79  FSEKFADSEWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDEPRSYMATIDREYKARS 138

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGV 156
            F E  KRW +A+   A+ +G  S  I+ ES+LI+ +   V K+L     S N+  LV +
Sbjct: 139 SFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAM 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE 213
              I EIE LL +   +  C + +WG+GG+ K T+A A + +++   +G    F  NV E
Sbjct: 199 GSRIFEIERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYERVTSSNKGIKHLFVRNVNE 258

Query: 214 -AEETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV--------- 259
             E+  G++ +  KL S+L  + N+     NI  +  RL+R +V +V D+V         
Sbjct: 259 ICEKHHGVEKIVHKLYSKLLDENNIDREDLNIAYRRERLSRSRVFVVLDNVETLEQLEQL 318

Query: 260 ------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                        +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D 
Sbjct: 319 ALGYVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNNKESIRLFSLHAFKQDR 377

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              +  + +  AI Y +G PLALK+LG  L G     W S +  L    ++ IE +L+ S
Sbjct: 378 PQDNWTDKSHLAISYCKGNPLALKILGGALFGEDVHYWRSLLTGLRQSGNLGIESILRRS 437

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY-------- 411
           YD L   +K +F+D+AC L G  R  +I    +++ +S    K LI+  L          
Sbjct: 438 YDKLGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKDLIDKSLLTCVPSENGE 497

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI------- 460
            I +HDLL++M   IV++E     GKR+RL    D++++L     KN  T  +       
Sbjct: 498 MIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIV 555

Query: 461 ----------------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
                                       EGI LD++   +E+++ + AF  M  L FL+F
Sbjct: 556 MVIPRRKRRKVTDMHERGYDPLEEHRTTEGICLDLSG-TKEMYLKANAFEGMNSLTFLKF 614

Query: 493 YGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRL 552
              +                  L++ Q PLK +              TK+   +D +  L
Sbjct: 615 KSPE------------------LDYAQYPLKNVK-------------TKIHLPYDGLNSL 643

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLI 610
           P  L   +        D    + LP +   ++L +L ++G+ IR   E   +   V  ++
Sbjct: 644 PEGLRWLQW-------DGYPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIV 696

Query: 611 LSNN--SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLP 645
           L     +NL  IP+                        +++L+KL  L I+ C+ L+ LP
Sbjct: 697 LDLRYCTNLIAIPDISSSLNLEELLLFGCRSLVEVPFHVQYLTKLVTLDINVCKNLKRLP 756



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 17/203 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LP       T  +  +  C+ L  +P  + NL  L    +  T I+ LP S+  L  
Sbjct: 895  IESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQ 954

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L +  +LE IP SI  LSKL    +S CE + +LPELP NL  L  R+C SL+ L
Sbjct: 955  LHSICLRDCKSLESIPNSIHKLSKLGTFSMSGCESIPSLPELPPNLKELEVRDCKSLQAL 1014

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   +LY+N   F    ++D    +E + +  +  SL    ER ++ S    G+E
Sbjct: 1015 P---SNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHASLSPSYERQVRCS----GSE 1067

Query: 721  IPKWFRHQSMGSS--ATLKTRPP 741
            +PKWF ++SM     +T+K   P
Sbjct: 1068 LPKWFSYRSMEDEDCSTVKVELP 1090


>gi|15242354|ref|NP_199338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5459305|emb|CAB50708.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|10176996|dbj|BAB10246.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007838|gb|AED95221.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 226/793 (28%), Positives = 353/793 (44%), Gaps = 112/793 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG D R  F SHL   L L +I  FIDD   RG  +   LL  IE S I + I
Sbjct: 16  HQVFINFRGADLRRRFVSHLVTALKLNNINVFIDDYEDRGQPLD-VLLKRIEESKIVLAI 74

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS  Y  S W                      FY+++PS VR     FG  F  + K   
Sbjct: 75  FSGNYTESVWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKGKFGDRFRSMAKG-D 133

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA------------TFQS 148
           E+ K+WK A     ++ G   +    ES+ + EI   V   L                 +
Sbjct: 134 ERKKKWKEAFNLIPNIMGIIIDKKSVESEKVNEIVKAVKTALTGIPPEGSHNAVVGALGN 193

Query: 149 KNKGL---------VGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKI 198
            N G           G E  ++++E  L     +G   + + G+ GI K T+   ++   
Sbjct: 194 SNAGTSSGDKKHETFGNEQRLKDLEEKLDRDKYKGTRIIGVVGMPGIGKTTLLKELYKTW 253

Query: 199 SRHFEGSYFALNVREAEETGGIKDLQKKLLSELSK--DGNMRNIESQLNRLARKKVRIVF 256
              F        +R   +   +  L + LL ELSK    ++ N++   ++L  +KV +V 
Sbjct: 254 QGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLNHPHVDNLKDPYSQLHERKVLVVL 313

Query: 257 DDVT-------------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKL 297
           DDV+                    GSRV+I T D   L N   +  Y ++ L + D+ +L
Sbjct: 314 DDVSKREQIDALREILDWIKEGKEGSRVVIATSDMS-LTNGLVDDTYMVQNLNHRDSLQL 372

Query: 298 FCQWAFGGDHLDASH---IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI 354
           F   AF  D  +      ++L++  + YA+G PLALKVLG  L  +S + W S M+KL  
Sbjct: 373 FHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSMDHWNSKMKKLAQ 432

Query: 355 IPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS-----------KS 403
            P   I  V ++SYD L  +QK+ FLDIACF   + +D V S+  +S           KS
Sbjct: 433 SPSPNIVSVFQVSYDELTTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKS 491

Query: 404 LINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ-----VLKKN 454
           L +  L      R+ MHDLL    RE+  K S     ++ RLW H+ I +     VL+  
Sbjct: 492 LTDKFLINTCDGRVEMHDLLYKFSREVDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNK 551

Query: 455 TGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--------KNKCMVSHLEG 506
                + GI LD+++V  E  ++   F  M  LR+L+FY           NK  +     
Sbjct: 552 MKAANVRGIFLDLSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLK 611

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
           +P  EVR L W + PL+TL  +     LV LK+P +++EQLW+  +  P   C     + 
Sbjct: 612 LPLKEVRCLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTP---CLRWVDLN 668

Query: 565 FEIIDCKMLERLPDELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                C +      + E L+ L ++G TT++  P  + ++  +  L L   ++LE +PE 
Sbjct: 669 HSSKLCSLSGL--SKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE- 725

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--C 681
             +L  L  L +S C   +  P +  N+  L   + T++ +LP  +  +  ++ +N+  C
Sbjct: 726 -MNLISLKTLTLSGCSTFKEFPLISDNIETLYL-DGTAISQLPMNMEKLQRLVVLNMKDC 783

Query: 682 NFLKLDPNELSEI 694
             L+  P  + E+
Sbjct: 784 KMLEEIPGRVGEL 796



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 177/441 (40%), Gaps = 93/441 (21%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQC-PLKTLNICAEKLVSLKMPCTKV 542
            M K++ L F   K    +  L  +    ++ L    C   K   + ++ + +L +  T +
Sbjct: 703  MKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAI 762

Query: 543  EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT--------------- 587
             QL       P ++   +  +   + DCKMLE +P  +  L+ L                
Sbjct: 763  SQL-------PMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPE 815

Query: 588  ----------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISH 637
                      + GT I  +P+    L  V+ L LS N+ +  +P  I  LS+L +L + +
Sbjct: 816  IDISFLNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 638  CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM-------SSVLYVNLCNFLKLDPNE 690
            C  L ++PE P NL  L A  C+SL+ +   L+ +       S+ ++ N  N  +    E
Sbjct: 872  CTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQAAKEE 931

Query: 691  LSEIVKDGWMKHSLYEERG----IKKSMY---FPGNEIPKWFRHQSMGSSATLKTRPPRP 743
            ++   +      S   +R     + +S++   FPG E+P WF H+++GS   +K  P   
Sbjct: 932  ITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWH 991

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDG-NVYAVCCDWKRKSEGHLY------ 796
                KL   A CAVV            S  D  D  +  +V C +K K E   +      
Sbjct: 992  D--KKLAGIALCAVV------------SCLDPQDQVSRLSVTCTFKVKDEDKSWVAYTCP 1037

Query: 797  --SWFL--GKISYVESDHVFLG---------CNSFGG-EYFGPNYDEFSFRIHCSFHFPP 842
              SW    G    +E DHVF+G         C+  G  +   P      F +        
Sbjct: 1038 VGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNSDECNPTEASLKFTVTGGTS--- 1094

Query: 843  YLERGEVK--KCGIHFVYAQD 861
              E G+ K  KCG+  VYA+D
Sbjct: 1095 --ENGKYKVLKCGLSLVYAKD 1113


>gi|12324938|gb|AAG52417.1|AC011622_5 putative disease resistance protein; 23468-19973 [Arabidopsis
           thaliana]
          Length = 1063

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 241/885 (27%), Positives = 385/885 (43%), Gaps = 165/885 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           Y VF SF G D R  F SHL           F D  + RG  IS  L   I  S I+I++
Sbjct: 42  YRVFTSFHGPDVRKTFLSHLRKQFICNGTTMFDDQAIERGQTISPELTRGIRESRISIVV 101

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S+ YASS W                      FY VDPS VRKQ+    + F +    + 
Sbjct: 102 LSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKVFKKTCSGKT 161

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
            EK +RW  AL +  +++G        ESK++E+IA D+  +++ T     + +VGVE  
Sbjct: 162 EEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFEDMVGVETH 221

Query: 160 IEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
           +E+I+SLL + ++    +  I+G  GI K TIA A+ + +S  F+ + F  N+R +    
Sbjct: 222 LEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYNSS 281

Query: 215 -EETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS---------- 261
            +E G    LQ++LLS++     MR  N+ +    L  +KV I+ DDV            
Sbjct: 282 LDEYGLKLQLQEQLLSKILNQTGMRVYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANE 341

Query: 262 ------GSRVIITTRDKQVLKNCWANKK-YRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                 GSRV++TT ++++LK     K  Y +      +A ++FC++ F           
Sbjct: 342 TKWFGPGSRVVVTTENQELLKQHDDIKNTYYVDFPTQKEARQIFCRYGFKQSTPQDGFEN 401

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEI-IPHVE--IEEVLKISYDSL 371
           L+++ IK    +PL L V+G YL  ++++ WE  + +LE     V+  IE VL++ YD L
Sbjct: 402 LSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSVDRNIERVLRVGYDGL 461

Query: 372 DDSQKNVFLDIACFLEGEHRDEVISIFDAS-------------KSLINLDLFYRIRMHDL 418
            +  + +FL IA F   +  D V ++   +             KSLI       I MH L
Sbjct: 462 HEKDQLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSGGNIVMHKL 521

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
           L+ +GRE V+++    P KR  L    +I  VL+ ++G   + GIS +++ +   +H+++
Sbjct: 522 LQQVGREAVQRQ---EPWKRQILIDAHEICNVLETDSGCANVMGISFNVSTIPNGVHISA 578

Query: 479 YAFSKMPKLRFLRFYGDKNKC--MVSHLEGVPFA-EVRHLEWPQCPLKTL---------- 525
            AF  M  LRFL  Y  +      V+  + + F   +R L W   P K+L          
Sbjct: 579 KAFQNMRNLRFLSIYETRRDVNLRVNVPDDMDFPHRLRSLHWEVYPGKSLPSTFRPEYLV 638

Query: 526 -----NICAEKLVSLKMPCTKVEQL----------------------------WDDVQRL 552
                N   EKL     P T + +L                            W  V+ +
Sbjct: 639 ELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVE-I 697

Query: 553 PSSLCTFK---------------TPITFEI--------IDCKMLERLPDELENLEYLTVK 589
           PSS+                    P  F +        + C  L + P    N+  L + 
Sbjct: 698 PSSVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNITSLVIG 757

Query: 590 GTTIRELPESLGRLS----------------WVKRLILSNNSNLERIPESIRHLSKLTFL 633
              + E+ ES+   S                W   LI    +++ERIP+ I+ L  L  L
Sbjct: 758 DAMLEEMLESIRLWSCLETLVVYGSVITHNFWAVTLIEKMGTDIERIPDCIKDLPALKSL 817

Query: 634 FISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
           +I  C +L +LPELP +L  L+   C SL+ +   +   S ++  +  N  +L       
Sbjct: 818 YIGGCPKLFSLPELPGSLRRLTVETCESLKTVSFPID--SPIVSFSFPNCFEL------- 868

Query: 694 IVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKT 738
               G     +  ++  +   Y PG EIP  F H+++G S T+++
Sbjct: 869 ----GEEARRVITQKAGQMIAYLPGREIPAEFVHRAIGDSLTIRS 909


>gi|357486227|ref|XP_003613401.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355514736|gb|AES96359.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 976

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 202/628 (32%), Positives = 327/628 (52%), Gaps = 69/628 (10%)

Query: 127 ESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGIS 186
           ES +++EI  +VLK+LD  +       VG+E   E++   L   + GVC + IWG+GGI 
Sbjct: 13  ESSVVKEIVGNVLKKLDKKYLPIPDFPVGLESRAEKLIQFLRKNTRGVCLVGIWGMGGIG 72

Query: 187 KITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGNMR--NIE-- 241
           K TIA  V+N +   FE   F  N+R+  E+  G  DLQ++LLS++ K  N++  N+E  
Sbjct: 73  KSTIAKVVYNNLCYEFEDQSFLANIRQVWEKERGQIDLQEQLLSDILKTRNVKVHNVEWG 132

Query: 242 -SQLN-RLARKKVRIVFDDVTS--------GSR--------VIITTRDKQVLKNCWANKK 283
            + +N RL  K+  ++ DDV++        G+R        +IITTRD ++L     +  
Sbjct: 133 KAMINERLCTKRALVILDDVSTREQLNALCGNRNGIGPGSIIIITTRDARLLDILGVDFI 192

Query: 284 YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
           Y  + L   ++ +LF   AF   +   + + L+   + Y  G+PLAL+VLG YL  R K 
Sbjct: 193 YEAEGLNVHESRRLFNWHAFKEANPSEAFLILSGDVVSYCGGLPLALEVLGSYLFNRRKR 252

Query: 344 VWESAMRKLEIIPHVEIEEVLKISYDSLDDS-QKNVFLDIACFLEGEHRDEVISIFDA-- 400
            W+S + KL+ IP+ +I E LKIS+D L+D  +KN+FLD+ CF  G+ R  V  I +   
Sbjct: 253 EWQSVISKLQKIPNDQIHEKLKISFDGLEDHMEKNIFLDVCCFFIGKDRAYVTEILNGCG 312

Query: 401 -----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ 449
                       +SL+ ++   ++ MH LLRDMGREIVR+ S   P KR RLW  +D+  
Sbjct: 313 LHADIGIEVLIERSLLKVEKNNKLGMHALLRDMGREIVRESSPEEPEKRTRLWCFEDVVD 372

Query: 450 VLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRF-----LRFYGDKNKCMVSHL 504
           VL + TGT+AIEG+ L   + +R +  N+ A  KM KLR      ++  GD  +C    L
Sbjct: 373 VLAEQTGTKAIEGLVLKSQRTSR-VCFNTIALKKMKKLRLLQLDNVQVIGDY-ECFSKQL 430

Query: 505 EGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTP 562
                   R L W   PLK +  N   + +V++ +  + + Q+W    + P  +   K  
Sbjct: 431 --------RWLSWQGFPLKYMPENFYQKNVVAMDLKHSNLTQVW----KKPQLIEGLK-- 476

Query: 563 ITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLER 619
               +   K L+R PD  +L NLE L +K   ++ E+  S+G L+ +  + L + ++L  
Sbjct: 477 -ILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLNNLLLINLKDCTSLSN 535

Query: 620 IPESIRHLSKLTFLFISHCERLQTLPELPC---NLGLLSARNCTSLEKLPAGLSSMSSVL 676
           +P  I  L  +  L +S C ++  L E      +L  L A N T ++++P  +    S+ 
Sbjct: 536 LPREIYQLRTVKTLILSGCSKIDKLDEDILQMESLKTLMAAN-TRVKQVPFSIVRSKSIG 594

Query: 677 YVNLCNFLKLDPNELSEIVKDGWMKHSL 704
           Y++LC +  L  +    +++  W+  ++
Sbjct: 595 YISLCGYKGLSHDVFPSLIR-SWISPAM 621


>gi|13517477|gb|AAK28810.1|AF310964_1 resistance-like protein P4-B [Linum usitatissimum]
          Length = 1202

 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 224/769 (29%), Positives = 349/769 (45%), Gaps = 158/769 (20%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG DTR  FTSHL   LS K I+TFID +L + ++I + L+  ++   +++++
Sbjct: 21  YDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESIDE-LISILQRCALSVVV 78

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSR---LRK 97
           FSE++A S W                      FY+VDP  V  +S S+     R    R 
Sbjct: 79  FSEKFADSVWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDESRSYMATIDREYKARS 138

Query: 98  RFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGV 156
            F E  KRW +A+   A+ +G  S  I+ ES+LI+ +   V K+L     S N+  LV +
Sbjct: 139 SFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAM 198

Query: 157 ECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE 213
              I EIE LL +   +    + +WG+GG+ K T+A A + +++   +G    F  NV E
Sbjct: 199 SSRIFEIERLLAMDKLDDTFIIGLWGMGGVGKTTLAEACYERVTSSNKGIKHLFVRNVNE 258

Query: 214 -AEETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV--------- 259
             E+  G++ +  KL S+L  + N+     NI  +  RL+  +V +V D+V         
Sbjct: 259 ICEKHHGVEKIVHKLYSKLLDENNIDREDLNIAYRRQRLSHLRVFVVLDNVETLEQLEQL 318

Query: 260 ------------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH 307
                        +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D 
Sbjct: 319 ALGYVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDKESIRLFSLHAFKQDR 377

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKIS 367
              +  + +  A  Y +G PLALK+LG  L G     W S +  L    ++ +E +L+ S
Sbjct: 378 PQDNWTDKSHLATSYCKGNPLALKILGGALFGEDVHYWRSLLTGLRQSGNLGMETILRRS 437

Query: 368 YDSLDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY-------- 411
           YD L   +K +FLD+AC L G  +  +I    +++ +S    K LI+  L          
Sbjct: 438 YDKLGKEEKKIFLDVACLLNGMSKSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSENGE 497

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI------- 460
            I +HDLL++M   IV++E     GKR+RL    D++++L     KN  T  +       
Sbjct: 498 MIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIV 555

Query: 461 ----------------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
                                       EGI LD++K  +E+++ + AF  M  L FL+F
Sbjct: 556 MVIPKRKKRKVTDMHQKGDDPLEEHRTTEGIRLDLSKT-KEMYLKANAFEGMNSLTFLKF 614

Query: 493 YGD---------KNKCMVSH-----LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLK 536
                       KN  M  H     L  +P   +R L W   P K+L      + LV L 
Sbjct: 615 ESPEMKYPHHRLKNVKMKIHLPYDGLNSLPEG-LRWLHWDAYPSKSLPAKFYPQHLVHLI 673

Query: 537 MPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTTIREL 596
           +  + + + W+   +           I  ++  C  L  +PD   +L    +       L
Sbjct: 674 IRRSPIRRCWEGYDQ-----PQLVNLIVLDLCYCANLITIPDISSSLNLEELLLLRCVSL 728

Query: 597 PESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
            E                     +P  +++L+KL  L ISHCE L+ LP
Sbjct: 729 VE---------------------VPSHVQYLTKLVTLDISHCENLKPLP 756



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 105/213 (49%), Gaps = 21/213 (9%)

Query: 543  EQLWDDVQRLPSSLCTFKTPI----TFEIIDCKMLERLPDELENLEYL---TVKGTTIRE 595
            EQLW     L  SL     P+    +  +  C+ L  +P  + NL  L    +  T I+ 
Sbjct: 874  EQLWIGWSPLIESLPEISEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSETGIKS 933

Query: 596  LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLS 655
            LP S+  L  +    L    +LE IP SI  LSKL  L +S CE + +LPELP NL  L 
Sbjct: 934  LPSSIQELRQLHFFELRYCESLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKELD 993

Query: 656  ARNCTSLEKLPAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSL--YEERGI 710
               C SL+ LP   S+   +LY+NL +F    +LD    +E V +  +  SL    +R +
Sbjct: 994  VSRCKSLQALP---SNTCKLLYLNLIHFEGCPQLDQAIPAEFVANFLVHASLSPSHDRQV 1050

Query: 711  KKSMYFPGNEIPKWFRHQSMGSS--ATLKTRPP 741
            + S    G+E+P+WF ++SM     +T+K   P
Sbjct: 1051 RCS----GSELPEWFSYRSMEDEDCSTVKVELP 1079


>gi|10177889|dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 223/829 (26%), Positives = 364/829 (43%), Gaps = 165/829 (19%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
           VF++FRG + R NF SHL   L  K I  FID     G  +S  LL  IE S IA+ IFS
Sbjct: 19  VFINFRGVELRKNFVSHLEKGLKRKGINAFIDTDEEMGQELS-VLLERIEGSRIALAIFS 77

Query: 64  ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
            RY  S+W                      FY+V P  V++    FG  F  L K   +K
Sbjct: 78  PRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQPVTVKELKGDFGDKFRELVKSTDKK 137

Query: 103 MKR-WKNALTEAADLSGF---DSNVIRPESKLIEEIANDVLKRLD--------------- 143
            K+ WK AL     L+G    + +V   E ++I  I   V + L+               
Sbjct: 138 TKKEWKEALQYVPFLTGIVLDEKSVSSDEDEVINIIIRKVKEILNRRSEGPPSKCSALPP 197

Query: 144 ATFQSKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHF 202
              Q +++   G+E  I+++E  L  GS+   + + + G+ GI K T+A  ++ K +  F
Sbjct: 198 QRHQKRHETFWGIELRIKQLEEKLRFGSDETTRTIGVVGMPGIGKTTLATMLYEKWNDRF 257

Query: 203 EGSYFALNVREAEETGGIKDLQKKLLSELSK--DGNMRNI----ESQLNRLARKKVRIVF 256
                  ++ EA E  G+  L  K L  L K  + N+ ++    E+  ++L   KV ++ 
Sbjct: 258 LRHVLIRDIHEASEEDGLNYLATKFLQGLLKVENANIESVQAAHEAYKDQLLETKVLVIL 317

Query: 257 DDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQ 300
           D+V++                GS+++ITT DK ++     N  Y +  L   DA K F +
Sbjct: 318 DNVSNKDQVDALLGERNWIKKGSKILITTSDKSLMIQSLVNDTYEVPPLSDKDAIKHFIR 377

Query: 301 WAFGGDHLDA------SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE- 353
           +AF G+   A      +  +L+   + Y +G PLAL++LG  L G+ +  W   +  L+ 
Sbjct: 378 YAFDGNEGAAPGPGQGNFPKLSKDFVHYTKGNPLALQMLGKELLGKDESHWGLKLNALDQ 437

Query: 354 ---IIPHVEI----EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA------ 400
                P   I    + V + SY +L   +K+  LDIACF   +  + V S+ D+      
Sbjct: 438 HHNSPPGQSICKMLQRVWEGSYKALSQKEKDALLDIACF-RSQDENYVASLLDSDGPSNI 496

Query: 401 -----SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
                +K +IN+    ++ MHD L  + +E+ R+ +      R+RLWHH  I  VL KN 
Sbjct: 497 LEDLVNKFMINI-YAGKVDMHDTLYMLSKELGREATATDRKGRHRLWHHHTIIAVLDKNK 555

Query: 456 GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD------KNKCMVSHLEG--V 507
           G   I  I LD++ + R+     +AF+ M  LR+L+ Y        ++   ++  EG  +
Sbjct: 556 GGSNIRSIFLDLSDITRKWCFYRHAFAMMRDLRYLKIYSTHCPQECESDIKLNFPEGLLL 615

Query: 508 PFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP------------ 553
           P  EVR+L W + PLK +  +     LV LK+P +++E++W+D +  P            
Sbjct: 616 PLNEVRYLHWLKFPLKEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKK 675

Query: 554 ----SSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---------------------- 587
               + L   +      +  C  L+ +  ++EN+++L                       
Sbjct: 676 LNTLAGLGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISLK 735

Query: 588 ------------------------VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                                   + GT I+ELP  +GRL  +  L +     L+R+P+S
Sbjct: 736 TLILSGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDS 795

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLS 670
           +  L  L  L +S C +L   PE   N+  L     + T+++ +P  LS
Sbjct: 796 LGQLKALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKILS 844



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 196/461 (42%), Gaps = 90/461 (19%)

Query: 457  TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE 516
             + ++ ++L+     +E+H++      M  ++FL F   +    +  L  +    ++ L 
Sbjct: 685  AQNLQELNLEGCTALKEMHVD------MENMKFLVFLNLRGCTSLKSLPEIQLISLKTLI 738

Query: 517  WPQCP-LKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLER 575
               C   KT  + ++KL +L +  T +++L  D+ RL       +  +   +  CK L+R
Sbjct: 739  LSGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRL-------QRLVMLNMKGCKKLKR 791

Query: 576  LPD---ELENLEYLTVKG-TTIRELPESLGRLS-------------------WVKRLILS 612
            LPD   +L+ LE L + G + + E PE+ G +S                    V+RL L+
Sbjct: 792  LPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKILSVRRLCLN 851

Query: 613  NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
             N  + R+P+ +   S+L +L + +C+ L  +P+LP NL  L+   C+SL+ +   L   
Sbjct: 852  KNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLVCS 911

Query: 673  SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEER-------GIKK-----------SM 714
              + +VN  +F+  + NEL +  K+  +   +Y ER        +K+             
Sbjct: 912  IPMKHVN-SSFIFTNCNELEQAAKEEIV---VYAERKCHLLASALKRCDESCVPEILFCT 967

Query: 715  YFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGED 774
             FPG E+P WF H ++GS    +  PP    +N+L   A C VV F         K+ + 
Sbjct: 968  SFPGCEMPSWFSHDAIGSMVEFEL-PPH-WNHNRLSGIALCVVVSF---------KNCKS 1016

Query: 775  DWDGNVYAVCCDWKRKSEGHLYSWFLGKI-------SYVESDHVFLG---CNSF------ 818
              +  V   C     +      +W +G +         VESDHVF+G   C  F      
Sbjct: 1017 HANLIVKFSCEQNNGEGSSSSITWKVGSLIEQDNQEETVESDHVFIGYTNCLDFIKLVKG 1076

Query: 819  -GGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVY 858
             GG    P      F +         L   EV K G  FV+
Sbjct: 1077 QGGPKCAPTKASLEFSVRTGTGGEATL---EVLKSGFSFVF 1114


>gi|297790450|ref|XP_002863115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308939|gb|EFH39374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 213/750 (28%), Positives = 348/750 (46%), Gaps = 131/750 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF SFRGED R +F SH+        I  FID+++ RG +I   L+  I  S IAII+
Sbjct: 63  HHVFPSFRGEDVRRDFLSHIQMEFQRMGITPFIDNEIKRGQSIGPELIRAIRESKIAIIL 122

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRL-RKRF 99
            S  YASS W                      FY+VDPS V+K +  FG+ F +    + 
Sbjct: 123 LSRNYASSSWCLDELAEIMKCREELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E + RW+ AL   A ++G+ S     E+ +I++IA D+   L+ +  S +  GLVG+  
Sbjct: 183 KEHVGRWRQALANVATIAGYHSTNWDNEAAMIKKIATDISNMLNNSASSSDFDGLVGMRE 242

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            +E++E LLC+ S+ V  + IWG  GI K TIA  ++NK+S  F+ S F           
Sbjct: 243 HLEKMEPLLCLDSDEVRLIGIWGPSGIGKTTIARVIYNKLSGSFQLSVF----------- 291

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------G 262
            ++ ++ K     S D + +    Q   L  KKV +V D V                  G
Sbjct: 292 -MESIEAKYTRPCSDDYSAKLQLQQQFMLKDKKVLVVLDGVDQSMQLDAMAKETWWFGPG 350

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           SR+IITT+D+++ +    N  Y++      +A ++ C++AFG +       EL  +  + 
Sbjct: 351 SRIIITTQDRKLFRAHGINHIYKVDFPSTEEALQILCKYAFGQNSPTHGFEELAWEVTQL 410

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
           A  +P                                      ++ D +D S +   +  
Sbjct: 411 AGELP--------------------------------------LALDGVDKSMQLDAMVK 432

Query: 383 ACFLEGEHRDEVISIFDASKSLINLDLFYR--IRMHDLLRDMGREIVRKESINHPGKRNR 440
             +  G     +I+  D           +R  I MHDLL  +G +IVRK+S+  PG+R  
Sbjct: 433 ETWWFGPGSRIIITTQDRK--------LFRGYINMHDLLVKLGIDIVRKQSLREPGQRLF 484

Query: 441 LWHHKDIYQVLKKNT-GTEAIEGISLDM--NKVNREIHMNSYAFSKMPKLRFLRFYGDKN 497
           L   ++I +VL  +  G+ ++ GI+ +   +++  ++H++  AF  M  L+FLRF G+ N
Sbjct: 485 LVDAREICEVLNLDANGSRSVIGINYNFGEDRIKEKLHISERAFQGMSNLQFLRFEGNNN 544

Query: 498 KCMVSHLEGVPFAEVRHLEWPQCPLKTLN--ICAEKLVSLKMPCTKVEQLWDDVQRLPSS 555
              + H       ++R L W   P+  L      + LV L M C+K+E+LW+ ++ LP+ 
Sbjct: 545 TLHLPHGLEYISRKLRLLHWTYFPMTCLPPIFNTDFLVELDMRCSKLEKLWEGIKPLPN- 603

Query: 556 LCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILS 612
               K     ++    +L+ LPD     NL+ L + G +++ + P ++G    +++L L 
Sbjct: 604 ---LK---RMDLRSSLLLKELPDLSTATNLQKLNLSGCSSLVKPPSTIGYTKNLRKLYLG 657

Query: 613 NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP------CNLGLLSARNCTSLEKLP 666
             S+L  +  SI +L  L  L +S    L  L ELP       NL  L+   C+SL +LP
Sbjct: 658 GCSSLVELSFSIGNLINLKELDLSS---LSCLVELPFSIGNATNLRKLNLDQCSSLVELP 714

Query: 667 AGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
           + +         NL N  +LD + LS +V+
Sbjct: 715 SSIG--------NLINLKELDLSSLSCMVE 736



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 57/246 (23%)

Query: 574  ERLPDELENLEYLTVKGTTIRELPESL---GRLSW------------------VKRLILS 612
            +R P+   N+E L +KGTTI E+P S+    RL++                  + RL ++
Sbjct: 914  KRFPEISTNVETLYLKGTTIEEVPSSIKSWSRLTYLHMSYSENLMNFPHAFDIITRLYVT 973

Query: 613  NNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM 672
             N+ ++ +P  ++  S L  L +  C++L +LP++P ++  + A +C SLEKL    S  
Sbjct: 974  -NTEIQELPPWVKKFSHLRELILKGCKKLVSLPQIPDSITYIDAEDCESLEKLDC--SFH 1030

Query: 673  SSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQS-MG 731
               + VN     KL+      I++     +++            PG E+P +F HQS  G
Sbjct: 1031 DPEIRVNSAKCFKLNQEARDLIIQTPTSNYAI-----------LPGREVPAYFTHQSATG 1079

Query: 732  SSATLK-TRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRK 790
             S T+K    P P      + F  C ++V          + G+D  +   Y  C    +K
Sbjct: 1080 GSLTIKLNEKPLPTS----MRFKACILLV----------RKGDD--ENGCYVSC----KK 1119

Query: 791  SEGHLY 796
            S  +LY
Sbjct: 1120 SRHYLY 1125



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENL----EYLTVKGTTIRELPESLGRLSWVK 607
           LP S+          +  C  L  LP  + NL    E      + + ELP S+G L  +K
Sbjct: 689 LPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELDLSSLSCMVELPSSIGNLINLK 748

Query: 608 RLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLE---K 664
            L LS+ S L  +P SI + + L  L +  C  L  LP    NL  L   N +SL    +
Sbjct: 749 ELDLSSLSCLVELPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVE 808

Query: 665 LPAGLSSMSSVLYVNL--CNFLKL 686
           LP  + + +++  +NL  C+ LKL
Sbjct: 809 LPFSIGNATNLEDLNLRQCSNLKL 832



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 21/138 (15%)

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG----TTIRELPESLGRLSWVK 607
           LPSS+         ++  C  L  LP  + NL  L V      + + ELP S+G  + ++
Sbjct: 761 LPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLE 820

Query: 608 RLILSNNSN-------------LERIPESIRHLSKLTFLFISHCERLQTLPELPCN---L 651
            L L   SN             LE +P +I+ L  L  L + HC  L  LP    N   L
Sbjct: 821 DLNLRQCSNLKLQTLNLRGCSKLEVLPANIK-LGSLRKLNLQHCSNLVKLPFSIGNLQKL 879

Query: 652 GLLSARNCTSLEKLPAGL 669
             L+ R C+ LE LPA +
Sbjct: 880 QTLTLRGCSKLEDLPANI 897


>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1276

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 221/765 (28%), Positives = 370/765 (48%), Gaps = 108/765 (14%)

Query: 2   YDVFLSFRGEDTRDN----FTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEA--- 54
           +D  L   G D +D+    F S++   L L+     I D       +++S L  +E    
Sbjct: 148 FDGILLVSGGDNQDSEERYFISYISKELCLRGFTPLIYD-------LTKSTLAGVEMLHR 200

Query: 55  SCIAIIIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS 93
           S + IIIFS  YASSR                       F++V  S +R QS SF R FS
Sbjct: 201 SRVGIIIFSNNYASSRQCLDKFVAILDYSKANNFVLLPVFFKVKVSDIRGQSGSFRRAFS 260

Query: 94  RLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGL 153
           RL             A+ +   + G D  VI     L + I +DV   L++    K +G 
Sbjct: 261 RLEHSVLSSQVPTLTAINKYQYMKGED--VI-----LAKSIVSDVCLLLNSETNMKLRG- 312

Query: 154 VGVECSIEEIESLL-CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
                 I+ I SLL C        + +WG+ GI K  I   +F + +  ++  YF  +  
Sbjct: 313 ---RLQIQSILSLLNCSHFSAPHIVGLWGMAGIGKTAITREIFRRQAERYDVCYFLPDFH 369

Query: 213 EAEETGGIKDLQKKLLSELSKDG--NMRNIESQL----NRLARKKVRIVFDDVTS----- 261
              +T G+  L+ +  S +S +    +   +++L    +R   KKV +V D V+S     
Sbjct: 370 IVCQTRGLSHLRDEFFSRISGEEKVTIDACDTKLGFIRDRFLSKKVLVVLDGVSSARDAE 429

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                      G  +I+T+R++QVL  C A + Y +++L   ++ +L  Q+A   +   +
Sbjct: 430 FLVGGFGWFSGGHTLILTSRNRQVLVQCNAKEIYEIQKLSERESLQLCSQFATEQNWKGS 489

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           +   L  + + YA G+PLAL  LG  L  +  +  +  +++L   P VEI++  K S++ 
Sbjct: 490 T--SLVSELVNYASGIPLALCALGSSLQNQCIKDEKQHLKRLRQNPLVEIQDAFKRSFNV 547

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLF------------YRIRMHDL 418
           LD ++KN FLD+ACF  GE++D V++I D    L  L ++             +I M ++
Sbjct: 548 LDGNEKNTFLDLACFFRGENKDYVVNILDGCGFLTELGIYGLIDESLISIVDNKIEMLNI 607

Query: 419 LRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNS 478
            +D GR +V +ES +  GKR+RLW   DI  VL  N+GTEAIEGI LD   +   + ++ 
Sbjct: 608 FQDTGRFVVCQES-SETGKRSRLWDPSDIVDVLTNNSGTEAIEGIFLDSTGLT--VELSP 664

Query: 479 YAFSKMPKLRFLRFYG--DKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--NICAEK 531
             F K+ +LRFL+ Y    KN C VS  +G   +P  E+R L W +CPL++L      + 
Sbjct: 665 TVFEKIYRLRFLKLYSPTSKNHCNVSLPQGLYSLP-DELRLLHWERCPLESLPRKFNPKN 723

Query: 532 LVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLEYLTVK 589
           +V L MP + + +LW   + L +     K  I   +   + L + P   +  NLE++ ++
Sbjct: 724 IVELNMPYSNMTKLWKGTKNLEN----LKRII---LSHSRRLIKFPRLSKARNLEHIDLE 776

Query: 590 G-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           G T++ ++  S+     +  L L + S+L+ +P ++ HL  L  L +S C  L+  P+  
Sbjct: 777 GCTSLVKVNSSILHHHKLIFLSLKDCSHLQTMPTTV-HLEALEVLNLSGCLELEDFPDFS 835

Query: 649 CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNEL 691
            NL  L     T++ ++P+ +  +S ++ ++L  C+ L+  P E+
Sbjct: 836 PNLKELYLAG-TAIREMPSSIGGLSKLVTLDLENCDRLQHLPPEI 879



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 554 SSLCTFKTPITFEIID------CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVK 607
           S L T  T +  E ++      C  LE  PD   NL+ L + GT IRE+P S+G LS + 
Sbjct: 803 SHLQTMPTTVHLEALEVLNLSGCLELEDFPDFSPNLKELYLAGTAIREMPSSIGGLSKLV 862

Query: 608 RLILSNNSNLERIPESIRHLSKLTFL 633
            L L N   L+ +P  IR+L  +  L
Sbjct: 863 TLDLENCDRLQHLPPEIRNLKVVVTL 888


>gi|4588066|gb|AAD25974.1|AF093647_1 flax rust resistance protein [Linum usitatissimum]
          Length = 816

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 223/740 (30%), Positives = 343/740 (46%), Gaps = 110/740 (14%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+  L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQFLRRYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  E ++ WK+AL +  DL G+       +  + +E++ D+   +       +   LVG+
Sbjct: 181 FEGETIQNWKDALKKVGDLKGWHIGQNDKQGAIADEVSTDIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE ++
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 217 T-GGIKDLQKKLLSEL----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
              G+  LQKKL+SE+          + D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 359 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L + +   E+ + LKI
Sbjct: 419 PPSDYETLANDVVDTTAGLPLTLKVIGSLLFKQEIGVWEDTLEQLCKTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISI-------------FDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++E   +             F   + +I +      
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNITFLIQRCMIQVGDDDEF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHD LRDMGREIVR+E +  P KR+R+W  +    +L+   G+  ++ IS+       +
Sbjct: 539 EMHDQLRDMGREIVRREDV-RPWKRSRIWSREGGIDLLRNKKGSSKVKAISITWGV---K 594

Query: 474 IHMNSYAFSKMPKLRFLR-----FYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNI 527
               S  F  + +LR+L        GD N  +       P  +   L+   CP L  L  
Sbjct: 595 YEFKSECFLNLSELRYLHASSSMLTGDFNNLL-------PNLKWLELDIGGCPDLTELVQ 647

Query: 528 CAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT 587
               + SL+     +   W +V  +  SL  F  P+  E+    M+    D+L+ +  L 
Sbjct: 648 TVVAVPSLRR--LTIRDSWLEVGPMIQSLPNF--PMLDELT-LSMVIITEDDLDVIGSL- 701

Query: 588 VKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFIS--HCERLQTLP 645
                     E L RL  V   +   +S +ERI  S+  L KLT L +       ++ L 
Sbjct: 702 ----------EELVRLELV---LDDTSSGIERIA-SLSKLQKLTTLIVEVPSLREIEGLA 747

Query: 646 ELPCNLGLLSARNCTSLEKL 665
           EL  +L  L  + CTSLE+L
Sbjct: 748 ELK-SLQRLYLQGCTSLERL 766


>gi|4588064|gb|AAD25973.1|AF093646_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1294

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 177/557 (31%), Positives = 273/557 (49%), Gaps = 75/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT  L+H L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + ++++ D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVEDLKGWHIGKDDEQGAIADKVSADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE +E
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDCCCFIDNIRETQE 300

Query: 217 TGGIKDLQKKLLSEL-----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
             G+  LQKKL+SE+           +  G  + I+    R++R K+ +V DDV      
Sbjct: 301 KDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIK---ERVSRFKILVVLDDVDEKFKF 357

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 358 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 417

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 418 PPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRRTLNLDEVYDRLKI 477

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L+   K +FLDIACF  G++++E                IF   + +I +      
Sbjct: 478 SYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDEF 537

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 538 KMHDQLRDMGREIVRREDV-LPWKRSRIWSAEEGIDLLLNKKGSSKVKAISIPWGV---K 593

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 594 YEFKSECFLNLSELRYL 610


>gi|215261581|gb|ACJ64861.1| disease resistance protein RPP1-like protein R7 [Arabidopsis
           thaliana]
          Length = 1135

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 236/833 (28%), Positives = 376/833 (45%), Gaps = 160/833 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           +DVF SF G D R  F SH+      K I  FID+ + R  +I   L   I+ S IAI++
Sbjct: 129 HDVFPSFHGADVRRTFLSHILESFRRKGIDPFIDNNIERSKSIGPELKEAIQGSKIAIVL 188

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK-RF 99
            S +YASS W                      FY VDP+ ++KQ+  FG+ F++  K + 
Sbjct: 189 LSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKL 248

Query: 100 PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKN-KGLVGVEC 158
            E+++RW+ AL + A ++G  S     E+++IE+I+ DV   LD +  SK+    VG+  
Sbjct: 249 KEQVERWRKALEDVATIAGEHSRNWSNEAEMIEKISTDVSNMLDLSIPSKDFDDFVGMAA 308

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA---- 214
            +E  E LL +  + V  + IWG  GI K TIA  + N++S  F+ S   +N++      
Sbjct: 309 HMERTEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYRRP 368

Query: 215 --EETGGIKDLQKKLLSEL--SKDGNMRNIESQLNRLARKKVRIVFDDVTS--------- 261
             +E      LQ ++LS++   KD  + ++     RL  KKV +V D+V           
Sbjct: 369 CFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAK 428

Query: 262 -------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIE 314
                  GSR+IITT D  VLK    N  Y++      +A ++FC  AFG         E
Sbjct: 429 ETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNYEAFQIFCMNAFGQKQPHEGFDE 488

Query: 315 LTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDS 374
           +  + +  A  +PL LKVLG  L G+SK  WE  + +L      +I  +++ S+D+L D 
Sbjct: 489 IAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGSIIQFSFDALCDE 548

Query: 375 QKNVFLDIACF--LEGEHR-DEVIS-----------IFDASKSLINLDLFYRIRMHDLLR 420
            K +FL IAC    +  HR +EV++           + D  KSLI++    RI MH LL 
Sbjct: 549 DKYLFLYIACLFNFQSVHRVEEVLANKFSHVRHGLDVLD-EKSLISIK-NGRIFMHTLLE 606

Query: 421 DMGREIVRKESINHPGKRNRLW-HHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSY 479
             G E  RK+ ++H  ++++L    +DI +VL  +T                        
Sbjct: 607 QFGIETSRKQFVHHGYRKHQLLVGERDICEVLDDDTT----------------------- 643

Query: 480 AFSKMPKLRFLRFYGDKNKCMVSHLEGVPFA-EVRHLEWPQC-PLKTLNICAEKLVSLKM 537
                 +LR L++        +  L  +  A  +  L+   C  L  L    EKL+SL++
Sbjct: 644 ------QLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLISLQI 697

Query: 538 ----PCTKVEQL--WDDVQRLP-------SSLCTFKTPIT------FEIIDCKMLERLPD 578
                C+ + +L  + +  +L        SSL      I         +I+C  +  LP 
Sbjct: 698 LDLQDCSSLVELPSFGNTTKLKKLDLGNCSSLVKLPPSINANNLQELSLINCSRVVELPA 757

Query: 579 ----------ELEN----------------LEYLTVKG-TTIRELPESLGRLSWVKRLIL 611
                     EL+N                L  L + G +++ +LP S+G ++ ++   L
Sbjct: 758 IENATKLRELELQNCSSLIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDL 817

Query: 612 SNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSAR-----NCTSLEKLP 666
           SN SNL  +P SI +L KL  L +  C +L+T   LP N+ L+S R     +C+ L+  P
Sbjct: 818 SNCSNLVELPSSIGNLQKLYMLRMCGCSKLET---LPTNINLISLRILNLTDCSQLKSFP 874

Query: 667 AGLSSMSSVLYVNLCNFLKLDPNELSEIVKD--GWMKHSLYEERGIKKSMYFP 717
              + +S          L+L+   + E+      W + ++YE    +    FP
Sbjct: 875 EISTHISE---------LRLNGTAIKEVPLSITSWSRLAVYEMSYFESLKEFP 918



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 46/252 (18%)

Query: 530  EKLVSLKM-PCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV 588
            +KL  L+M  C+K+E L       P+++      I   + DC  L+  P+   ++  L +
Sbjct: 834  QKLYMLRMCGCSKLETL-------PTNINLISLRI-LNLTDCSQLKSFPEISTHISELRL 885

Query: 589  KGTTIRELP-----------------ESLGRLSWVKRLI---LSNNSNLERIPESIRHLS 628
             GT I+E+P                 ESL    +   +I   L  + +++ +P  ++ +S
Sbjct: 886  NGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPYALDIITDLLLVSEDIQEVPPRVKRMS 945

Query: 629  KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDP 688
            +L  L +++C  L +LP+L  +L  + A NC SLE+L    ++    LY   C       
Sbjct: 946  RLRDLRLNNCNNLVSLPQLSNSLAYIYADNCKSLERLDCCFNNPEISLYFPNC------- 998

Query: 689  NELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSM-GSSATLKTRPPRPAGYN 747
             +L++  +D  M  S       +K    PG ++P  F H++  G S  +K    + +   
Sbjct: 999  FKLNQEARDLIMHTS------TRKCAMLPGTQVPPCFNHRATSGDSLKIKL---KESSLR 1049

Query: 748  KLISFAFCAVVV 759
              + F  C ++V
Sbjct: 1050 TTLRFKACIMLV 1061


>gi|357456945|ref|XP_003598753.1| Resistance protein [Medicago truncatula]
 gi|355487801|gb|AES69004.1| Resistance protein [Medicago truncatula]
          Length = 657

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 223/726 (30%), Positives = 345/726 (47%), Gaps = 160/726 (22%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVL-SLKSIKTFIDDQLI-RGDNISQSLLGTIEASCIAI 59
           YDVFL+FRG+DTR+NFT +L++ L + + I+TF+DD+ I +G+ I+ +LL  IE S I I
Sbjct: 15  YDVFLNFRGKDTRNNFTGNLYNSLQNQRGIQTFMDDEEIQKGEEITPTLLQAIEESRIFI 74

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            IFS  YASS +                      FY VDPS +R  + ++   F +  +R
Sbjct: 75  AIFSPNYASSTFCLTELVTILECSMSQGRLFSPVFYDVDPSQIRYLTGTYAEAFKKHEER 134

Query: 99  FPE---KMKRWKNALTEAADLSGFDSNVIRP----ESKLIEEIANDVLKRLDATFQSKNK 151
           F +   KM++W++AL +AA++SG+     +P    E K IE+I   V  +++       K
Sbjct: 135 FGDDKHKMQKWRDALHQAANMSGWH---FKPGYELEYKFIEKIVKAVSVKINRIPLHVAK 191

Query: 152 GLVGVECSIEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
             VG+E  I E+ SLL + S E V  + I+GIGGI K T A AV N I+  FEG  F  +
Sbjct: 192 NPVGLESQILEVISLLGLDSNEKVNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDD 251

Query: 211 VREAEETGGIKDLQKKLLSELSKDGNM------RNIESQLNRLARKKVRIVFDDVT---- 260
           +R+ E    +  LQ+ LLS++  + ++      R +     RL RKKV ++ D+V     
Sbjct: 252 LRKREINHDLARLQEALLSDILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKGKQ 311

Query: 261 ------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                       SGS++I+TTRDK +L +    K Y +K+L    A +LF   AF     
Sbjct: 312 LQAFVGGDDWYGSGSKIIVTTRDKHLLASNGIVKVYEVKQLKNEKALELFSWHAFKNKKN 371

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
              H+++  +A+ Y QG+PLAL+                        P  +I E+LK+SY
Sbjct: 372 YPGHLDIAKRAVSYCQGLPLALES-----------------------PSKDIHEILKVSY 408

Query: 369 DSLDDSQKNVFLDIACF--------------LEGEHRDEVISIFDASKSLINLDLFYRIR 414
           D L++ +K +FLDIACF              L G H ++ I      KSL+ +D    +R
Sbjct: 409 DDLEEDEKGIFLDIACFFNSFEIGYVKEILYLHGFHAEDGIQEL-TDKSLMKIDTNGCVR 467

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREI 474
           MHDL++DMGREIVR+ES   P +R+RLW   D++  LK                      
Sbjct: 468 MHDLIQDMGREIVRQESTLEPERRSRLWFSDDMHCSLKW--------------------- 506

Query: 475 HMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKL 532
                AF +M  L+ L     +N    +  + +P   ++ L+W   P  +L        L
Sbjct: 507 ---CGAFGQMKNLKILII---RNARFSNSPQILPNC-LKVLDWSGYPSSSLPSEFNPRNL 559

Query: 533 VSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT 592
             L +  ++++           SL  F+     +   CK L  +P               
Sbjct: 560 AILNLHESRLKWF--------QSLKVFERLSLLDFEGCKFLIEVP--------------- 596

Query: 593 IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFL----FISHCERLQTLPELP 648
                 SL R+  +  L L   +NL R+ +S+  L +L  L    ++  C  L++ PE+ 
Sbjct: 597 ------SLSRVPNLGALCLDYCTNLIRVHDSVGFLDRLVLLSAQGYLRGCSHLESFPEV- 649

Query: 649 CNLGLL 654
             LG++
Sbjct: 650 --LGMM 653


>gi|13517466|gb|AAK28804.1|AF310959_1 resistance-like protein P1-B [Linum usitatissimum]
          Length = 1196

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 222/777 (28%), Positives = 355/777 (45%), Gaps = 189/777 (24%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG+DTRD FTSHL   LS K I+ FID++L + ++I + L+  ++   +++++
Sbjct: 21  YDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESIDE-LISILQRCPLSVVV 79

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSER+A S W                      FY+VDPS V+ +SH  G           
Sbjct: 80  FSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGP---------- 129

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVECS 159
              KRW +AL   A  +G  S  I+ ES+LI+ +   V K+L     S N+  LV +   
Sbjct: 130 ---KRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSR 186

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE-AE 215
           I E+E LL +   +  C + +WG+GG+ K T+A A +++++   +G    F  NV E  E
Sbjct: 187 IFEVERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCE 246

Query: 216 ETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV------------ 259
           +  G+  +  KL S+L  + N+     NI  +  RL+R +V +V D+V            
Sbjct: 247 KHHGVDKIVHKLYSKLLDENNIDREDLNIAYRRERLSRLRVFVVLDNVETLEQLEKLALG 306

Query: 260 ---------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDA 310
                     +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D    
Sbjct: 307 YVFNLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDKESIRLFSLHAFKQDRPQD 365

Query: 311 SHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDS 370
           + +  +  A  Y +G PLALK+LG  L       W+S +  L    ++ +E +L+ SYD 
Sbjct: 366 NWMGKSRLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLRQSGNLGMETILRRSYDK 425

Query: 371 LDDSQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY--------RIR 414
           L   +K +F+D+AC L G  R  +I    +++ +S    K LI+  L           I 
Sbjct: 426 LGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSENGEMIE 485

Query: 415 MHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVL----------------------- 451
           +HDLL++M   IV++E     GKR+RL    D++++L                       
Sbjct: 486 VHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKSWSTSIVNLFKGIVMVI 543

Query: 452 ---KKNTGTE-------------AIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD 495
              K+   T+               EGI LD++   +E+++ + AF  M  L FL+F   
Sbjct: 544 PRRKRRKVTDMHEKGYDPLEEHRTTEGICLDLSGT-KEMYLKANAFEGMNSLTFLKF--- 599

Query: 496 KNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSS 555
                          E+  +E P+  LK +              TK+   +D +  LP  
Sbjct: 600 ---------------ELPEIELPRYRLKNVK-------------TKIHLPYDGLNSLPEG 631

Query: 556 LCTFKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLILSN 613
           L   +        D    + LP +   ++L +L ++G+ IR   E   +   V  ++L  
Sbjct: 632 LRWLQW-------DGYPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDL 684

Query: 614 N--SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLP 645
              +NL  IP+                        +++L+KL  L ISHC+ L+ LP
Sbjct: 685 RYCANLIAIPDISSSLNLEELLLCLCVSLVEVPFHVQYLTKLVTLDISHCKNLKRLP 741



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 43/335 (12%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTVKG---TTIRELPESLGRLSW 605
            ++ LP       T  + E+  C+ L  +P  + NL  L       T I+ LP S+  L  
Sbjct: 880  IESLPEISEPMNTLTSLEVFYCRSLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELRQ 939

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L N  +LE IP SI +LS L    +S C+ + +LPELP NL  L+   C SL+ L
Sbjct: 940  LYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLNVSGCKSLQAL 999

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   +LY+N   F    ++D    +E + +  +  SL    ER ++ S    G+E
Sbjct: 1000 P---SNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHASLSPSYERQVRCS----GSE 1052

Query: 721  IPKWFRHQSMGSS--ATLKTRPP---RPAGYNKLISFAFCAVVVFPAFLKYFRH------ 769
            +PKWF ++SM     +T+K   P       +  +   AF  V     +  + R       
Sbjct: 1053 LPKWFSYRSMEDEDCSTVKVELPLANDSPDHPMIKGIAFGCVNSCDPYYSWMRMGCRCEV 1112

Query: 770  -KSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHVFLGCNSFGGEYFGPNYD 828
              +    W  NV  +  +   KS   ++  F   +S            S G E     Y 
Sbjct: 1113 GNTTVASWVSNVKVMGPE--EKSSEKVWLVFNKNLS---------STGSMGSEEDEAWYV 1161

Query: 829  EF-SFRIHCSFHFPPY----LERGEVKKCGIHFVY 858
            ++  F +  +F+F  Y    +++ ++K+CG+  +Y
Sbjct: 1162 KYGGFDVSFNFYFLDYDDEIIKKVKIKRCGVSLMY 1196


>gi|13517468|gb|AAK28805.1|AF310960_1 resistance-like protein P2-A [Linum usitatissimum]
          Length = 1196

 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 221/774 (28%), Positives = 354/774 (45%), Gaps = 186/774 (24%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG+DTRD FTSHL   LS K I+ FID++L + ++I + L+  ++   +++++
Sbjct: 23  YDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESIDE-LISILQRCPLSVVV 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSER+A S W                      FY+VDPS V+ +SH  G           
Sbjct: 82  FSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGP---------- 131

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVECS 159
              KRW +AL   A  +G  S  I+ ES+LI+ +   V K+L     S N+  LV +   
Sbjct: 132 ---KRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSR 188

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE-AE 215
           I E+E LL +   +  C + +W +GG+ K T+A A +++++   +G    F  NV E  E
Sbjct: 189 IFEVERLLAMDKLDDTCIIGLWEMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICE 248

Query: 216 ETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV------------ 259
           +  G++ +  KL S+L  + N+     NI  +  RL+R +V +V D+V            
Sbjct: 249 KHHGVEKIVHKLYSKLLDENNIDREDLNIGYRRERLSRSRVFVVLDNVETLEQLALGYVF 308

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D    + +
Sbjct: 309 NLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDEESTRLFSLHAFKQDRPQDNWM 367

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
             +  A  Y +G PLALK+LG  L G     W S +  L    ++ IE +L+ SYD L  
Sbjct: 368 GKSRLATSYCKGNPLALKILGGALYGEDIHYWRSFLTGLRQPGNLGIENILRRSYDKLGK 427

Query: 374 SQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY--------RIRMHD 417
            +K +F+D+AC L G  R  +I    +++ +S    K LI+  L          +I +HD
Sbjct: 428 EEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKDLIDKSLLTCVSSKNEDKIEVHD 487

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI------------- 460
           LL++M   IV++E     GKR+RL    D++++L     KN  T  +             
Sbjct: 488 LLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVIPRR 545

Query: 461 ----------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNK 498
                                 EGI LD++   +E+ + + AF  M  L FL+F      
Sbjct: 546 KRRKVTDMHEKGYDPLEEHRTTEGICLDLSG-TKEMCLKANAFEGMNSLTFLKF------ 598

Query: 499 CMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
                       E   +++P  PLK +              TK+   +  +  LP  L  
Sbjct: 599 ------------ESPEIKYPHYPLKNVK-------------TKIHLPYYGLNSLPEGLRW 633

Query: 559 FKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNN-- 614
            +        D    + LP +   ++L +L ++G+ IR   E   +   V  ++L     
Sbjct: 634 LQW-------DGYPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDLRYC 686

Query: 615 SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLP 645
           +NL  IP+                        +++L+KL  L I++C+ L+ LP
Sbjct: 687 ANLIAIPDISSSLNLEELLLCRCVSLVEVPFHVQYLTKLVTLDINYCKNLKRLP 740



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 17/203 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LP       T  +  +  C+ L  +P  + NL  L    +  T I+ LP S+  L  
Sbjct: 881  IESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQ 940

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L +  +LE IP SI  LSKL  L +S CE + +LPELP NL  L+   C SL+ L
Sbjct: 941  LFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKTLNVSGCKSLQAL 1000

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   +LY+N  +F    +LD     E V +  +  SL    ER ++ S    G+E
Sbjct: 1001 P---SNTCKLLYLNTIHFDGCPQLDQAIPGEFVANFLVHASLSPSYERQVRCS----GSE 1053

Query: 721  IPKWFRHQSMGSS--ATLKTRPP 741
            +PKWF ++SM     +T+K   P
Sbjct: 1054 LPKWFSYRSMEDEDCSTVKVELP 1076


>gi|13517472|gb|AAK28808.1|AF310961_1 resistance-like protein P3-A [Linum usitatissimum]
          Length = 1110

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 221/774 (28%), Positives = 354/774 (45%), Gaps = 186/774 (24%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVFL FRG+DTRD FTSHL   LS K I+ FID++L + ++I + L+  ++   +++++
Sbjct: 23  YDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESIDE-LISILQRCPLSVVV 81

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FSER+A S W                      FY+VDPS V+ +SH  G           
Sbjct: 82  FSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGP---------- 131

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG-LVGVECS 159
              KRW +AL   A  +G  S  I+ ES+LI+ +   V K+L     S N+  LV +   
Sbjct: 132 ---KRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSR 188

Query: 160 IEEIESLLCIGS-EGVCKLRIWGIGGISKITIAGAVFNKISRHFEG--SYFALNVRE-AE 215
           I E+E LL +   +  C + +W +GG+ K T+A A +++++   +G    F  NV E  E
Sbjct: 189 IFEVERLLAMDKLDDTCIIGLWEMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICE 248

Query: 216 ETGGIKDLQKKLLSELSKDGNMR----NIESQLNRLARKKVRIVFDDV------------ 259
           +  G++ +  KL S+L  + N+     NI  +  RL+R +V +V D+V            
Sbjct: 249 KHHGVEKIVHKLYSKLLDENNIDREDLNIGYRRERLSRSRVFVVLDNVETLEQLALGYVF 308

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                  +GSR+IITTR+K+VL+N  A K Y ++ L   ++ +LF   AF  D    + +
Sbjct: 309 NLSKVFAAGSRIIITTRNKKVLQNAMA-KIYNVECLNDEESTRLFSLHAFKQDRPQDNWM 367

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
             +  A  Y +G PLALK+LG  L G     W S +  L    ++ IE +L+ SYD L  
Sbjct: 368 GKSRLATSYCKGNPLALKILGGALYGEDIHYWRSFLTGLRQPGNLGIENILRRSYDKLGK 427

Query: 374 SQKNVFLDIACFLEGEHRDEVI----SIFDAS----KSLINLDLFY--------RIRMHD 417
            +K +F+D+AC L G  R  +I    +++ +S    K LI+  L          +I +HD
Sbjct: 428 EEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKDLIDKSLLTCVSSKNEDKIEVHD 487

Query: 418 LLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK----KNTGTEAI------------- 460
           LL++M   IV++E     GKR+RL    D++++L     KN  T  +             
Sbjct: 488 LLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVIPRR 545

Query: 461 ----------------------EGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNK 498
                                 EGI LD++   +E+ + + AF  M  L FL+F      
Sbjct: 546 KRRKVTDMHEKGYDPLEEHRTTEGICLDLSG-TKEMCLKANAFEGMNSLTFLKF------ 598

Query: 499 CMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCT 558
                       E   +++P  PLK +              TK+   +  +  LP  L  
Sbjct: 599 ------------ESPEIKYPHYPLKNVK-------------TKIHLPYYGLNSLPEGLRW 633

Query: 559 FKTPITFEIIDCKMLERLPDEL--ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNN-- 614
            +        D    + LP +   ++L +L ++G+ IR   E   +   V  ++L     
Sbjct: 634 LQW-------DGYPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDLRYC 686

Query: 615 SNLERIPE-----------------------SIRHLSKLTFLFISHCERLQTLP 645
           +NL  IP+                        +++L+KL  L I++C+ L+ LP
Sbjct: 687 ANLIAIPDISSSLNLEELLLCRCVSLVEVPFHVQYLTKLVTLDINYCKNLKRLP 740



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 17/203 (8%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT---VKGTTIRELPESLGRLSW 605
            ++ LP       T  +  +  C+ L  +P  + NL  L    +  T I+ LP S+  L  
Sbjct: 879  IESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQ 938

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  + L +  +LE IP SI  LSKL  L +S CE + +LPELP NL  L+   C SL+ L
Sbjct: 939  LFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKTLNVSGCKSLQAL 998

Query: 666  PAGLSSMSSVLYVNLCNF---LKLDPNELSEIVKDGWMKHSLYE--ERGIKKSMYFPGNE 720
            P   S+   +LY+N  +F    +LD     E V +  +  SL    ER ++ S    G+E
Sbjct: 999  P---SNTCKLLYLNTIHFDGCPQLDQAIPGEFVANFLVHASLSPSYERQVRCS----GSE 1051

Query: 721  IPKWFRHQSMGSS--ATLKTRPP 741
            +PKWF ++SM     +T+K   P
Sbjct: 1052 LPKWFSYRSMEDEDCSTVKVELP 1074


>gi|862905|gb|AAA91022.1| L6 [Linum usitatissimum]
          Length = 1294

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 175/557 (31%), Positives = 274/557 (49%), Gaps = 75/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+  L    I TF  DD+L++G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + ++++ D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADKVSADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE +E
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDCCCFIDNIRETQE 300

Query: 217 TGGIKDLQKKLLSEL-----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
             G+  LQKKL+SE+           +  G  + I+    R++R K+ +V DDV      
Sbjct: 301 KDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIK---ERVSRFKILVVLDDVDEKFKF 357

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 358 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 417

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 418 PPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRRTLNLDEVYDRLKI 477

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L+   K +FLDIACF  G++++E                IF   + +I +      
Sbjct: 478 SYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDEF 537

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 538 KMHDQLRDMGREIVRREDV-LPWKRSRIWSAEEGIDLLLNKKGSSKVKAISIPWGV---K 593

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 594 YEFKSECFLNLSELRYL 610


>gi|4588054|gb|AAD25968.1|AF093641_2 flax rust resistance protein [Linum usitatissimum]
          Length = 1294

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 175/557 (31%), Positives = 274/557 (49%), Gaps = 75/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+  L    I TF  DD+L++G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + ++++ D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADKVSADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE +E
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDCCCFIDNIRETQE 300

Query: 217 TGGIKDLQKKLLSEL-----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
             G+  LQKKL+SE+           +  G  + I+    R++R K+ +V DDV      
Sbjct: 301 KDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIK---ERVSRFKILVVLDDVDEKFKF 357

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 358 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 417

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 418 PPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRRTLNLDEVYDRLKI 477

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L+   K +FLDIACF  G++++E                IF   + +I +      
Sbjct: 478 SYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDEF 537

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 538 KMHDQLRDMGREIVRREDV-LPWKRSRIWSAEEGIDLLLNKKGSSKVKAISIPWGV---K 593

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 594 YEFKSECFLNLSELRYL 610


>gi|262752410|gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helianthus annuus]
          Length = 1021

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 230/777 (29%), Positives = 352/777 (45%), Gaps = 146/777 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           +DVFLSFRGEDTR+NFT HL   L   +I+TF DD+ I+ G+ +   L   I+AS  +II
Sbjct: 19  FDVFLSFRGEDTRNNFTDHLLKALKEAAIETFFDDEEIQIGEFLKPELENAIKASRSSII 78

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFS------ 93
           + S+ YASS W                      FY V+PS VRKQ +SFG   +      
Sbjct: 79  VLSKDYASSTWCLDELALIMEQKRTSKHNVFPIFYHVNPSDVRKQRNSFGDAMADHKQRR 138

Query: 94  ------RLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQ 147
                 + R +  +K ++WK ALTE A + G ++N    E+KLIEEI  D+  RL+   +
Sbjct: 139 ERESDEKKRSQLGKKTEKWKKALTEVAHMKGKEAN--GRETKLIEEIVKDISSRLELHKR 196

Query: 148 SKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAVFNKISRHFEGSY 206
           S    L+G+E S+  I S L   S      L I+G+ GI K  +A  +F      FE S 
Sbjct: 197 SDIPKLIGMESSVRTITSFLNDASSHTTDVLTIFGMAGIGKTHLADYIFKSHYLEFESSC 256

Query: 207 FALNVRE---------AEETGGIKDLQKKLLSELSKDGNMRNIESQL-NRLARKKVRIVF 256
           F  ++             +   +KD+Q     ++    N++   S++ N L RK+  +V 
Sbjct: 257 FLEDIERRCTSQKRLLKLQKQLLKDIQATSWMDID---NVKAATSKIENSLFRKRTFLVL 313

Query: 257 DDVTS---------------GSRVIITTRDKQVLKNCW--------ANKKYRMKELVYAD 293
           D +                 GS++IIT+++  + + C          + K+ +  L   D
Sbjct: 314 DGINDSEHLDALIGTKGLHPGSKIIITSKNGSLTEKCKLFETQVPPKHTKHLLHGLNDKD 373

Query: 294 AHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL- 352
           + +L    AFG    +    +   K ++Y +G PLALKVLG   C      WE  +  L 
Sbjct: 374 SLQLLTCHAFGCHEPNEGDKKEMKKVVQYCKGHPLALKVLGSSFCSEDA-TWEDILESLG 432

Query: 353 -EIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDAS--------K 402
            EI P  +I++VL+ISYD+L  +  K +F  IAC   GE R     I  A         K
Sbjct: 433 KEINP--DIKKVLEISYDTLPSEKDKELFKYIACLFVGEERKFTEDILKACGICKPSGIK 490

Query: 403 SLINLDLFY-----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGT 457
            L+N  L        + MH LL+DMGR++VR+ES N P +R+ L +H++   VL+   GT
Sbjct: 491 VLVNRCLLTVGSSGELMMHQLLQDMGRDVVRQESPNKPWERSILLNHEECLDVLQNKQGT 550

Query: 458 EAIEGISL-------DMNKVNREIHMNSYAFSKMPKL-------------RFLRFYGDKN 497
             I+G+ L       D  K    ++M  + F  +P                F  F G ++
Sbjct: 551 TIIQGLVLLMRTFENDTCKEPSSVNMKRFGFRSLPSFIWVHMLLLSVLWWLFGLFSGIRS 610

Query: 498 KCMVSH--LEGVPFAEVRHLEWPQC------------------------PLKTL--NICA 529
               +    E +  +E+R+L+  Q                         PL  +  ++  
Sbjct: 611 SSRKTKGDFETLALSEMRNLKLLQLNYVQLSGSYKNFPHGIRWLCMHGFPLSYIPSDLQM 670

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLTV- 588
           E LV+L +  +K+ QLW    +L  SL         E++       LP     L+ LT+ 
Sbjct: 671 ENLVALDLSNSKLLQLWKK-PKLLRSLKFLNLSNCHELVRVGHFSGLP----LLKRLTLA 725

Query: 589 KGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
           + T++ E+ ES+G    ++ L LS  + L+ +P SI  L  LT L +  C  L   P
Sbjct: 726 RCTSLIEVCESIGTCQKLEILDLSECNKLKELPRSIGKLKSLTQLLVDGCSNLGEYP 782


>gi|862904|gb|AAA91021.1| L6tr [Linum usitatissimum]
          Length = 705

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 175/557 (31%), Positives = 274/557 (49%), Gaps = 75/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+  L    I TF  DD+L++G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + ++++ D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADKVSADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE 216
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE +E
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDCCCFIDNIRETQE 300

Query: 217 TGGIKDLQKKLLSEL-----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
             G+  LQKKL+SE+           +  G  + I+    R++R K+ +V DDV      
Sbjct: 301 KDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIKE---RVSRFKILVVLDDVDEKFKF 357

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 358 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 417

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 418 PPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRRTLNLDEVYDRLKI 477

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L+   K +FLDIACF  G++++E                IF   + +I +      
Sbjct: 478 SYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDEF 537

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 538 KMHDQLRDMGREIVRREDV-LPWKRSRIWSAEEGIDLLLNKKGSSKVKAISIPWGV---K 593

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 594 YEFKSECFLNLSELRYL 610


>gi|255563216|ref|XP_002522611.1| hypothetical protein RCOM_0884400 [Ricinus communis]
 gi|223538087|gb|EEF39698.1| hypothetical protein RCOM_0884400 [Ricinus communis]
          Length = 369

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/365 (43%), Positives = 214/365 (58%), Gaps = 40/365 (10%)

Query: 166 LLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQK 225
           +LC+ S+ V  L IW +GGI K T+A  +F +IS  F  SYF  NVRE  E   +  LQ 
Sbjct: 1   MLCLESKDVRILGIWEMGGIGKTTLARKIFKRISSQFHSSYFGQNVREKLEKSTLDSLQH 60

Query: 226 KLLSEL-----SKDGNMRNIESQLNR--LARKKVRIVFDDVTS----------------G 262
           ++LSEL     S  G   NI S   R  + RKKV IV DDV                  G
Sbjct: 61  EILSELLGKEYSDLGMPINISSSFIRKWIMRKKVLIVLDDVNDSEQIDFLVRPRDIYGPG 120

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKY 322
           S +IIT+RDKQ+L    AN  Y +KEL   DA KLF   AF G+    + +E+   A++Y
Sbjct: 121 SIIIITSRDKQILNYGNANI-YEVKELNSDDALKLFILHAFKGNPPAEALMEVARMAVEY 179

Query: 323 AQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDI 382
            +G PLALKVLG  L  +S E     +RKLE I   +++ +L+IS+D LDD +K +FLDI
Sbjct: 180 GRGNPLALKVLGSTLYDKSIEECRDHLRKLENISDKKLQNILRISFDDLDDDEKEIFLDI 239

Query: 383 ACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRK 429
           ACF + E ++EV SI  +              KSLI +    +I MHDLL+ MGR+IVR+
Sbjct: 240 ACFFKWEDKNEVESILSSFGRSAIIGIRVLQDKSLITVS-NKQIEMHDLLQQMGRDIVRQ 298

Query: 430 ESINHPGKRNRLWHHKDIYQVLKKNTGTE-AIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
           E I +P  R+RLW  +DIY+VL K+ G   +++ ISLDM+  +R++ ++S AF +M KL+
Sbjct: 299 ECIKNPEYRSRLWIPQDIYRVLTKDLGRSISVKSISLDMSD-SRDMELSSTAFKRMRKLK 357

Query: 489 FLRFY 493
           FLRFY
Sbjct: 358 FLRFY 362


>gi|307135798|gb|ADN33677.1| TIR-LRR-NBS disease resistance protein [Cucumis melo subsp. melo]
          Length = 1139

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 197/623 (31%), Positives = 313/623 (50%), Gaps = 62/623 (9%)

Query: 97  KRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDAT-FQSKNKGLVG 155
           K    K++ WK ALT AA LSG+D    + E++LI+EI   VL  ++        K  VG
Sbjct: 8   KLLTNKIQPWKEALTFAAGLSGWDLANSKDEAELIQEIVKRVLSIVNPMQLLHVAKHPVG 67

Query: 156 VECSIEEIESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           V   + +IE L+  IG EGV  + ++GIGGI K T+A A++NKI+  FEGS F L+VR  
Sbjct: 68  VNSRLRKIEELVSHIGFEGVNMVGMYGIGGIGKTTLAKALYNKIATQFEGSCFLLDVRRE 127

Query: 215 EETGGIKDLQKKLLSE-LSKDGNMRNIESQLN----RLARKKVRIVFDDV---------- 259
               G+  LQK LL+E L +D  + N +  +N    RL  KKV IV DDV          
Sbjct: 128 ASKHGLIQLQKTLLNEILKEDLKVVNCDKGINIIRSRLCSKKVLIVLDDVDHRDQLEALV 187

Query: 260 ------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHI 313
                   GS++I+TTR+K +L +   ++ + +  L    A +LF   AF  +H  +++ 
Sbjct: 188 GERDWFCQGSKIIVTTRNKHLLSSHGFDEIHNILGLNEDKAIELFSWHAFKKNHPSSNYF 247

Query: 314 ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDD 373
           +L+++   Y +G PLAL VLG +LC R +  W S + + E   + +I+++L++S+D L+D
Sbjct: 248 DLSERVTSYCKGHPLALVVLGSFLCNRDQVEWCSILDEFENSLNKDIKDILQLSFDGLED 307

Query: 374 SQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESIN 433
             K++FLDI+C L GE  + V     A                     MG +IV  ES+ 
Sbjct: 308 KVKDIFLDISCLLVGEKVEYVKDTLSACH-------------------MGHKIVCGESL- 347

Query: 434 HPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY 493
             GKR+RLW  KD+ +V   N+GT AI+ I L+ +   R I ++  AF  +  LR L   
Sbjct: 348 ELGKRSRLWLEKDVLEVFSSNSGTSAIKAIKLEFHNPTRLI-VDPQAFRNLKNLRLLIVR 406

Query: 494 GDKNKCMVSHL-EGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVEQLWDDVQRL 552
             +    + +L E + + E      P  P    +   + LV L +  + ++   D   RL
Sbjct: 407 NARFCAKIKYLPESLKWIEWHGFSQPSLP---SHFIVKNLVGLDLQHSFIK---DFGNRL 460

Query: 553 PSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRL 609
                     +++       L+++PD     NLE L ++  T +R +  S+  L  +  L
Sbjct: 461 KVGEWLKHVNLSYS----TSLKKIPDFSAASNLEKLYLRDCTNLRTIHRSIFCLVKLTLL 516

Query: 610 ILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPA 667
            LS    ++++P S   L  L  L +S C +L+ +P+     NL +L    CT+L  +  
Sbjct: 517 CLSGCCMIKKLPTSCFKLWSLKHLDLSGCTKLEKIPDFSSALNLEILHLSRCTNLRTIHN 576

Query: 668 GLSSMSSV--LYVNLCNFLKLDP 688
            + S+  +  LY++ C+ LK  P
Sbjct: 577 SVFSLHKLISLYLDFCSTLKTLP 599



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 530 EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYL 586
           E + SL    T V +   ++ +LPS L   K+    ++  C  LE  P   + +++L +L
Sbjct: 647 ESIGSLDRLQTLVSRKCTNLVKLPSIL-RLKSLKHLDLSWCSKLESFPIIDENMKSLRFL 705

Query: 587 TVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE 646
            +  T I++LP S+G L+ + RL L N ++L  +P++I  L  L  L + +C  LQ +P 
Sbjct: 706 DLSFTAIKDLPSSIGYLTELPRLNLGNCTSLISLPKTISLLMSLLDLELRNCRSLQEIPN 765

Query: 647 LPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYE 706
           LP N+  L A  C  L K                       P+ + +I+       +L E
Sbjct: 766 LPQNIQNLDAYGCELLTK----------------------SPDNIVDIISQK-QDLTLGE 802

Query: 707 ERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTR 739
              I +     G EIPKWF +++  +  +   R
Sbjct: 803 ---ISREFLLMGVEIPKWFSYKTTSNLVSASFR 832


>gi|357513683|ref|XP_003627130.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
 gi|355521152|gb|AET01606.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
          Length = 536

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/524 (35%), Positives = 276/524 (52%), Gaps = 80/524 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+DTR+ FTSHLH+ L  ++I T+IDD L++GD I ++L   I+ S I++++
Sbjct: 8   YDVFISFRGQDTRETFTSHLHYALCKENIITYIDDNLVKGDEIGEALAEAIQDSRISLVV 67

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLR---- 96
           FS+ YA+S+W                      FY    S VR Q+ S+ + FS       
Sbjct: 68  FSKNYATSKWCLNELLKILECKKLHGQVVIPVFYNTGTSEVRNQTGSYEKPFSHYEIEAI 127

Query: 97  --KRFPEKMKRWKNALTEAADLSGFDSN--VIRPESKLIEEIANDVLKRLDATFQSKNKG 152
             + F   +  W+ AL EAA++ G+DS     + +S++I+ I +DV K+L   + ++ KG
Sbjct: 128 NNESFANTVSEWRAALAEAANIPGWDSQSRTYKDDSQVIQSIVSDVWKKLALMYPNELKG 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           LV  +      ESLL    +   ++ IWG+GGI K TIA  +F K    +E + F  NV 
Sbjct: 188 LVHNDQHGSYTESLL----KRYSRIGIWGMGGIGKTTIARQMFAKHFAQYESACFMENVS 243

Query: 213 EAEETGGIKDLQKKLLSELSKDGNMRNIESQ-------LNR-LARKKVRIVFDDVTSG-- 262
           E  E  G + ++ KLLSEL K    R I +        + R L+ +K  IV DDV +   
Sbjct: 244 EEIEKFGPRYIRNKLLSELLK----RQITASDILGAPFIERILSGRKFFIVLDDVDNAAQ 299

Query: 263 --------------SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHL 308
                         SR+IIT RD+Q LK    +  + + +  + ++ +LF   AF  +H 
Sbjct: 300 LEYLCSELDDLGPNSRLIITGRDRQTLKGK-VDVIHEVTKWNFEESLRLFSLGAFKQNHP 358

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV--EIEEVLKI 366
              +  L+ +A+ YA GVPLALKVLG +   RS E WE  ++ LE        I+EVL++
Sbjct: 359 KEGYKLLSQRAVAYAGGVPLALKVLGSHFYSRSPEFWEPELKNLENKGESLRGIQEVLRV 418

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLFYRI 413
           SY+ L   +K +FLDIA F + E RD V  I DA              K+LI +     I
Sbjct: 419 SYNGLTVREKEMFLDIAFFFKDEKRDFVTRILDACGFNAASGIVTLEDKALITISYDNII 478

Query: 414 RMHDLLRDMGREIVRK---ESINHPGKRNRLWHHKDIYQVLKKN 454
           +MHDLL+ M  +IVR+   ++   P K +RL   K++  VLK N
Sbjct: 479 QMHDLLQQMAFDIVRQKKDQTSRDPEKCSRLRDIKEVCDVLKNN 522


>gi|4588048|gb|AAD25965.1|AF093638_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1303

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 180/575 (31%), Positives = 279/575 (48%), Gaps = 80/575 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT  L+H L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  E ++ WK+AL +  DL G+       +  + +E++ D+   +       +   LVG+
Sbjct: 181 FDGETIQNWKDALKKVGDLKGWHIGKDDKQGAIADEVSADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSEL-----------SKDGNMRNIESQLNRLARKKVRIVFDDV----- 259
           +  G+  LQKKL+SE+           +  G  + I+    R++R K+ +V DDV     
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIK---ERVSRFKILVVLDDVDEKFK 357

Query: 260 -----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGD 306
                       S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  +
Sbjct: 358 FEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKN 417

Query: 307 HLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLK 365
              + +  L +  +    G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LK
Sbjct: 418 TPPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIAVWEDTLEQLRKTLNLDEVYDRLK 477

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYR 412
           ISYD+L    K +FLDIACF  G+++++                IF   + +I +    +
Sbjct: 478 ISYDALKPEAKEIFLDIACFFIGKNKEKPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDK 537

Query: 413 IRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISL--DMNKV 470
            +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+   ++  
Sbjct: 538 FKMHDQLRDMGREIVRREDV-RPWKRSRIWSREEGIDLLLNKKGSSKVKAISMVPPLSPD 596

Query: 471 NREIHMNSYAFSKMPKLRFLR-----FYGDKNKCM 500
             +    S  F  + +LR+L        GD N  +
Sbjct: 597 FVKYEFKSECFLNLSELRYLHASSAMLTGDLNNLL 631



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 17/132 (12%)

Query: 570  CKMLERLPD--ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            C  +ER+    +L+ L  L VK  ++RE+ E L  L  ++RLIL   ++L R+P     L
Sbjct: 1054 CSGIERIASLSKLQKLTTLVVKVPSLREI-EGLAELKSLQRLILVGCTSLGRLP-----L 1107

Query: 628  SKLTFLFISHC----ERLQTLPELPCNLGLLSARNCTSLEKLPAGLS----SMSSVLYVN 679
             KL  L I  C    E +QT+  +P +L  L+ R+C  LE  P   S     M + L ++
Sbjct: 1108 EKLKELDIGGCPDLAELVQTVVAVP-SLVELTIRDCPRLEVGPMIQSLPKFPMLNKLTLS 1166

Query: 680  LCNFLKLDPNEL 691
            + N  K D  E+
Sbjct: 1167 MVNITKEDELEV 1178


>gi|9858478|gb|AAG01052.1|AF175395_1 resistance protein MG23 [Glycine max]
          Length = 435

 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 161/428 (37%), Positives = 232/428 (54%), Gaps = 53/428 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD+ L +G  I+++L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGR----HFSR 94
           + SE YASS +                       FY+VDPS VR    SFG     H  +
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 95  LRKRFPEKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
           L+  + EK++ WK AL + ++ SG  F  +  + E   I+EI   V  + +      +  
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG++  +  ++SLL +G++ V  +  I G+GG+ K T+A AV+N I+ HFE   F  NV
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 212 REAEETGGIKDLQKKLLSELSKDGNMRNIESQLN------RLARKKVRIVFDDVTS---- 261
           RE     G++ LQ  LLS+   D  +    S+        +L  KKV +V DDV      
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 262 ------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-L 308
                       GSRVIITTRD+Q+L      + Y+++EL    A +L  Q AFG +  +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKV 367

Query: 309 DASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISY 368
           D S+ ++ ++A+ YA G+PLALKV+G  L G+S E WES +   E  P   I   LK+SY
Sbjct: 368 DPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSY 427

Query: 369 DSLDDSQK 376
           D+L++ +K
Sbjct: 428 DALNEDEK 435


>gi|4588068|gb|AAD25975.1|AF093648_2 flax rust resistance protein [Linum usitatissimum]
          Length = 1291

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 179/557 (32%), Positives = 274/557 (49%), Gaps = 74/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+H L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYHFLCRYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  F-PEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  E ++ WK+AL +  DL G+       +  + +E+  D+   +       +   LVG+
Sbjct: 181 FNGETIQNWKDALKKVGDLKGWHIGKDDKQGAIADEVLADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDCCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSELSK----------DGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+SE+ +          D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFINDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  L    + +LF + AF  + 
Sbjct: 359 EDMLGNHKDFISQSRFIITSRSVRVLSTLNENQCKLYEVGSLSKPHSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +  A G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 419 PPSYYETLANDVVYTAAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRRTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISI-------------FDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++E   +             F   K +I +    + 
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNITFLIQKCMIQVGDDDKF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 539 KMHDQLRDMGREIVRREDV-RPWKRSRIWSREEGIDLLLNKKGSSKVKAISITRGV---K 594

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 595 YEFKSECFLNLSELRYL 611


>gi|2245047|emb|CAB10466.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1038

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 236/828 (28%), Positives = 357/828 (43%), Gaps = 152/828 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F S+L      +SI TF+D  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSNLLEAFDRRSINTFMDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY VDPS VRKQ+  FG  F +  +   
Sbjct: 72  FSKNYASSTWCLDELVEIHNRLNDWGQLVISVFYDVDPSEVRKQTGEFGDVFKKTCEDKE 131

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  AL +  +++G D      E+ ++ +IANDV  +L +   S     VG+E  
Sbjct: 132 EDQKQRWMQALVDITNIAGEDLRNGPSEAAMVVKIANDVSNKLISPSNSFGD-FVGIEAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E + S+LC+ S+    + IWG  GI K TI  A+++++   F    F  +V   +    
Sbjct: 191 LEAMNSILCLESKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKSEWE 250

Query: 220 IKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------GS 263
              L K L  ++   G +  +E  LN+   KKV IV DDV                  GS
Sbjct: 251 EIFLSKILGKDIKIGGKLGVVEQMLNQ---KKVLIVLDDVDDPEFLKTLVGETKWFGPGS 307

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
           R+I+ T+D Q+LK    +  Y +K      A K+ C+ AFG +        L  +    A
Sbjct: 308 RIIVITQDMQLLKAHDIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLA 367

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIA 383
             +PL L VLG  L  R+KE W   M +     + +I + L++SYD L    +++FL IA
Sbjct: 368 GNLPLGLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIA 427

Query: 384 CFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHP 435
           C   G           D V       KSLI +     I MH+LL  +G EI R +S  +P
Sbjct: 428 CLFNGFEVSYVNDLLEDNVGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKSKGNP 487

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE-IHMNSYAFSKMPKLRFLRFYG 494
           GKR  L   +D        T  + + GI       ++E + ++  +F  M  L+ L   G
Sbjct: 488 GKRRFLTDFED--------TLRKTVLGIRFCTAFRSKELLPIDEKSFQGMRNLQCLSVTG 539

Query: 495 DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRL 552
           D      S +   P  ++R L+W +CPLK L  +  A+ L+ L M  +K+E+LW+    L
Sbjct: 540 DYMDLPQSLVYLPP--KLRLLDWDRCPLKCLPYSFKADYLIQLTMMGSKLEKLWEGTVPL 597

Query: 553 PS---------------------------------SLCTFKTPIT-------FEIIDCKM 572
            S                                 SL T  + I         ++  C  
Sbjct: 598 GSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTK 657

Query: 573 LERLPD--ELENLEYLTV---------------------KGTTIR--------ELPESLG 601
           LE  P    LE+LEYL +                      G  IR         LP  L 
Sbjct: 658 LESFPTHLNLESLEYLGLLYYDNLRNFPVFKMETSTTSPHGIEIRVENCIWNKNLP-GLD 716

Query: 602 RLSWVKR-------------LILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPEL- 647
            L+ + R             LI+  N  LE++ E ++ L+ L  + +S C  L  +P+L 
Sbjct: 717 YLACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLTEIPDLS 776

Query: 648 -PCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELS 692
              NL  L   NC SL  +P+ + ++  ++ + +  C  L++ P +++
Sbjct: 777 KATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDVN 824



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGT-TIRELPE 598
           +E+LW+ VQ L S        +  ++ +C  L  +PD  +  NL  L +    ++  +P 
Sbjct: 745 LEKLWEGVQSLASL-------VEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPS 797

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
           ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P +  ++  L   N
Sbjct: 798 TIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLEN 856

Query: 659 CTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            T++E++P  + + S  +VL +  C  LK + PN
Sbjct: 857 -TAIEEVPCCIENFSWLTVLMMYCCKRLKNISPN 889


>gi|357468657|ref|XP_003604613.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505668|gb|AES86810.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1637

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 180/529 (34%), Positives = 281/529 (53%), Gaps = 47/529 (8%)

Query: 51   TIEASCIAIIIFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPE----KMKRW 106
            TIE+S +A++            FY + PS VR Q+  FG  F +   +  +     + +W
Sbjct: 1100 TIESSVLAVLPV----------FYDIYPSDVRHQTGEFGEAFQKALNKVLKGDEFMVPKW 1149

Query: 107  KNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESL 166
            ++AL +AA L+GF     R ES++I+ I  ++ +  D          VGVE  ++++  L
Sbjct: 1150 RDALRDAAGLAGFVVLNSRNESEVIKGIVENITRLFDKIDLFIVDNPVGVESQVQDMIKL 1209

Query: 167  LCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEE--TGGIKDL 223
            L    S+ V  + +WG+GGI K T+A A++NKI R+FEG  F  N+RE  E  +G  KD 
Sbjct: 1210 LDTHQSKDVLLIGMWGMGGIGKSTVAKAIYNKIGRNFEGRSFLANIREVGEQVSGQQKDS 1269

Query: 224  QKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKK 283
              ++L  L     +     QLN L              GSR+IITTRD  +L+    +K 
Sbjct: 1270 VIRVLLVLDDVNKL----DQLNTLCGSCKWF-----APGSRIIITTRDMDILRAKKVDKI 1320

Query: 284  YRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKE 343
            Y MKE+  +++ + F   AF          E++   +KY+ G+PLAL+VLG YL  R   
Sbjct: 1321 YEMKEMNESESLERFSWHAFKQKSPKEDFSEISINVVKYSGGLPLALEVLGSYLFDREVL 1380

Query: 344  VWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIFDA-- 400
             W   + KL+ IP+ ++ + LKISY  L DD++K++FLDIACF  G  R++VI I ++  
Sbjct: 1381 DWICVLEKLQSIPNEQVYKRLKISYHGLNDDTEKSIFLDIACFFIGIDRNDVICILNSCR 1440

Query: 401  -----------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ 449
                        +SL+ +D   ++ MHDLLRDMGREI+R++S   P +R+RLW H D+  
Sbjct: 1441 LFTEIGIKVLVERSLVIVDDKNKLGMHDLLRDMGREIIREKSPKEPEERSRLWFHGDVLD 1500

Query: 450  VLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF 509
            VL K+TGT+ +EG++  M   + +   ++ AF  M KLR L+  G +      +L     
Sbjct: 1501 VLSKHTGTKVVEGLTFKMPGRSAQ-RFSTKAFENMKKLRLLQLSGVQLDGDFKYLS---- 1555

Query: 510  AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL 556
              ++ L W   PL  +  N     LVS+ +  + V+ +W ++Q + S L
Sbjct: 1556 RNLKWLHWNGFPLTCIASNFYQRNLVSVVLENSNVKLVWKEMQIIYSGL 1604



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 198/611 (32%), Positives = 314/611 (51%), Gaps = 91/611 (14%)

Query: 124 IRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLL-CIGSEGVCKLRIWGI 182
           +R ES++I++I  +V++ LD T        VGV+  ++++  L+    S  V  L +WG+
Sbjct: 101 LRNESEVIKDIVENVIRLLDKTDLFIADYPVGVDSRVQDMIQLIDTQQSNDVLLLGMWGM 160

Query: 183 GGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKDGN--MRN 239
           GG+ K TIA A++NKI R+FE   F  N+RE  E+  G   LQ++L+ ++ K+    ++N
Sbjct: 161 GGMGKTTIAKAIYNKIGRNFEARSFLANIREVWEQVSGQVYLQEQLMHDIFKETTTKIQN 220

Query: 240 IESQL----NRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCW 279
           IE +      RL  K+V +V DDV                  GSR+IITTRDK +L+   
Sbjct: 221 IELEKPILKERLCHKRVLLVLDDVNKLDQLNALCGSRRWFAPGSRIIITTRDKHILRGKQ 280

Query: 280 ANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCG 339
            +K Y MKE+  +++ +LF   AF          +LT             L+VLG YL  
Sbjct: 281 VDKIYIMKEMDGSESLELFSWHAF----------KLT------------TLEVLGSYLFE 318

Query: 340 RSKEVWESAMRKLEIIPHVEIEEVLKISYDSL-DDSQKNVFLDIACFLEGEHRDEVISIF 398
           R    W S + KL+ IP+ E+ + LKISYD L DD+QK +FLDI+CF  G  R++VI I 
Sbjct: 319 RELLEWISVLEKLKKIPNDEVHKKLKISYDGLNDDTQKEIFLDISCFFIGMDRNDVIRIL 378

Query: 399 DA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHK 445
           +               +SL+ +D   ++ MHDLLRDMGREI+R++S   P + +RLW H+
Sbjct: 379 NGCGFFAEIGISVLVERSLVMVDDKNKLGMHDLLRDMGREIIREKSPKEPEEHSRLWFHE 438

Query: 446 DIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLE 505
           D+  VL ++TGT+A+EG++  M   + +   ++ AF  M KLR L+  G +      +L 
Sbjct: 439 DVLDVLLEHTGTKAVEGLTFKMPGRSTQ-RFSTKAFENMKKLRLLQLSGVQLDGDFKYLS 497

Query: 506 GVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQR--------LPSS 555
                 +R L W   PL  +  N     +VS+++  + V+ +W ++QR        L  S
Sbjct: 498 ----RNLRWLHWNGFPLACIPSNFYQRNIVSIELENSSVKLVWKEMQRMDQLKILNLSHS 553

Query: 556 LCTFKTPITFEIIDCKMLERLPDELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNN 614
            C  +TP             LP    NLE L +K    + E+ +S+G L+ +  + L N 
Sbjct: 554 HCLTQTP---------DFSYLP----NLEKLVLKDCPRLSEISQSIGHLNKILLINLKNC 600

Query: 615 SNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSM 672
            +L  +P +I  L  L  L +S C  +  L E    +  L+    N T++ K+P  +   
Sbjct: 601 ISLCNLPRNIYTLKSLKTLILSGCLMIDKLEEDLEQMESLTTLIANNTAITKVPFSVVRS 660

Query: 673 SSVLYVNLCNF 683
             + +++LC +
Sbjct: 661 KRIGFISLCGY 671


>gi|4588050|gb|AAD25966.1|AF093639_1 flax rust resistance protein [Linum usitatissimum]
          Length = 982

 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 178/557 (31%), Positives = 273/557 (49%), Gaps = 74/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+  L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQFLRRYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  E ++ WK+AL +  DL G+       +  + +E++ D+   +       +   LVG+
Sbjct: 181 FEGETIQNWKDALKKVGDLKGWHIGQNDKQGAIADEVSTDIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSELSK----------DGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+SE+ +          D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFINDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  L    + +LF + AF  + 
Sbjct: 359 EDMLGNHKDFISQSRFIITSRSVRVLSTLNENQCKLYEVGSLSKPHSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +  A G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 419 PPSYYETLANDVVYTAAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRRTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISI-------------FDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++E   +             F   K +I +    + 
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNITFLIQKCMIQVGDDDKF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 539 KMHDQLRDMGREIVRREDV-RPWKRSRIWSREEGIDLLLNKKGSSKVKAISITWGV---K 594

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LRF 
Sbjct: 595 YEFKSECFLNLSELRFF 611


>gi|298953305|gb|ADI99937.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 827

 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 204/699 (29%), Positives = 334/699 (47%), Gaps = 110/699 (15%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
           V +SFRGEDTR NFTSHL+  L  + I  FID+++ RG  IS SL   IE S I+I+I S
Sbjct: 17  VLISFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 76

Query: 64  ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
           + YASS W                      FY+V+PS VRKQ+ +FG  F+ L  RF +K
Sbjct: 77  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 136

Query: 103 MKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEE 162
           M+ W  ALT  + +SG+       E+ LI++I   V K+L  +     +          +
Sbjct: 137 MQAWGEALTAVSHMSGWVVLEKDDEANLIQKIVQQVWKKLTCSTMQLPR----------Q 186

Query: 163 IESLLC-IGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGI 220
            E+LL  +  +G   + + GIGG+ K T+A  ++N+I+  FEG  F  N+REA ++  G+
Sbjct: 187 FENLLSHVMIDGTRMVGLHGIGGMGKTTLAKTLYNRIADDFEGCCFLANIREASKQHEGL 246

Query: 221 KDLQKKLLSELSKDGNMR------NIESQLNRLARKKVRIVFDDVTS------------- 261
             LQ+KLL E+  D  +R       I    NRL  KK+ ++ DD+ +             
Sbjct: 247 VRLQEKLLYEILMDDFIRVSDLYKGINIIRNRLCSKKILLILDDIDTSEQLQVLAGGYDW 306

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
              GS+VI+TTR++ +L     NK   + EL Y +A +LF   AF        +++L+  
Sbjct: 307 FGYGSKVIVTTRNEHLLDIHGFNKLRSVPELNYGEALELFSWHAFQCSSPPTEYLQLSKD 366

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
           A+ Y + +PLAL+VLG +L    +  ++  + +  I                      N+
Sbjct: 367 AVNYCKNLPLALEVLGSFLYSTDQSKFKGILEEFAI---------------------SNL 405

Query: 379 FLDIACFLEGEHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR 438
             DI   L+G  +         + SL+ ++ + ++ MHDL++ +G  I R ++   P ++
Sbjct: 406 DKDIQNLLQGIQK-------LMNLSLLTINQWNKVEMHDLIQQLGHTIARSKTSISPSEK 458

Query: 439 NRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN- 497
            +L    D   VL       A++ I L+  K  +   ++S AF K+  L  L+    KN 
Sbjct: 459 -KLLVGDDAMHVLDGIKDARAVKAIKLEFPKPTKLDIIDSTAFRKVKNLVVLKV---KNV 514

Query: 498 -KCMVSHLEGVPFAEVRHLEWPQCPLKTLNICA--EKLVSLKMPCTKVEQL---WDDVQR 551
               +S L+ +P   +R + W + P  +       E L+ LK+P + ++     +   +R
Sbjct: 515 ISPKISTLDFLP-NSLRWMSWSEFPFSSFPSSYSMENLIQLKLPHSAIQHFGRAFMHCER 573

Query: 552 LPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKR 608
           L             ++ +   LE +PD     NLE L++ G  ++ ++ +S+G L  +  
Sbjct: 574 LKQ----------LDLSNSFFLEEIPDLSAAINLENLSLSGCISLVKVHKSVGSLPKLID 623

Query: 609 LILSNNS-NLERIPESIRHLSKLTFLFISHCERLQTLPE 646
           L LS++    ++ P  +R L  L      HC  LQ  P+
Sbjct: 624 LSLSSHVYGFKQFPSPLR-LKSLKRFSTDHCTILQGYPQ 661


>gi|357494167|ref|XP_003617372.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355518707|gb|AET00331.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1120

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 234/734 (31%), Positives = 338/734 (46%), Gaps = 144/734 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIR-GDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR NF  +L   L  + I  F DD+ +R G++IS +LL  IE S I++I
Sbjct: 82  YDVFLSFRGEDTRHNFIGYLRDALRKRGINPFFDDKNLRIGEDISPALLKAIEESKISVI 141

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           +FSE YASSRW                       FY  D S VR + +S+G        R
Sbjct: 142 VFSENYASSRWCLGELVKIIKCMKRNNKQTTFPIFYCADLSDVRNERNSYGEAMVAHENR 201

Query: 99  F---PEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLV 154
           F    E +K  K AL+EAADL G    N   P+  L+ E                    V
Sbjct: 202 FGKDSENIKACKAALSEAADLKGHHIHNWYPPKPSLVGE------------------NPV 243

Query: 155 GVECSIEEIESLLCI--GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVR 212
           G++  IEE++SLL +    + +C L I G+GGI K  +A A++NKI   FE + F  NVR
Sbjct: 244 GLDQHIEEVKSLLDMKPNDDTICMLGICGLGGIGKTELAKALYNKIVHQFEAASFIANVR 303

Query: 213 EAEETGGIKDLQKKLLSELSKDGNM-RNIESQLNRLARKKVRIVFDDVTS---------- 261
           E            K+ +  ++ G + + I     +L RKKV +V DDV            
Sbjct: 304 EK---------SNKINAARNRAGKISKGIYEIKYKLGRKKVLLVLDDVDEMEQIGNLAGG 354

Query: 262 ------GSRVIITTRDKQVLKNCWA---NKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                 GS VIITTRDK +L    +      Y M EL    + +LFC+ AFG  + +  +
Sbjct: 355 SDWFGPGSTVIITTRDKGLLVGTHSFVVQSIYEMTELSDQHSLELFCRNAFGKSNPETGY 414

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGR-SKEVWESAMRKLEIIPHVEIEEVLKISYDSL 371
              + +A+ YA+G+PLALKV+G  L  R S + WE A++  E IP   I++VLK+SYD L
Sbjct: 415 EATSSRAVGYAKGLPLALKVIGSNLATRKSLKAWEHALKDYERIPRKGIQDVLKVSYDVL 474

Query: 372 DDSQKNVFLDIACFLEG---EHRDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVR 428
               ++VFLDIAC  +G   E+ +E++                  +   LLR    E+ R
Sbjct: 475 QPYAQSVFLDIACCFKGGRIEYFEEILG----------------RQQETLLRSFALELNR 518

Query: 429 KESINHPGKRNRLWHHKDI----YQVLKKNTGTEAIEGISLDMNKVNREI-HMNSYAFSK 483
           K         N    H+ I    + V+    G+  +E     M   + E+  +N     K
Sbjct: 519 K---------NLTTVHESIGFLKHLVILSALGSIKLESFVQRMFLPSLEVLDLNLCVKHK 569

Query: 484 MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNICAEKLVSLKMPCTKVE 543
                F       NK +  +++  P  ++        P    N+    LVS++MP +K  
Sbjct: 570 ----HFPDIVNKMNKPLKIYMKNTPIKKL--------PNSIDNLIG--LVSIEMPYSK-- 613

Query: 544 QLWDDVQRLPSSLCTFKTPITFEIIDCKMLER-----LPDELENLEYLTVK-------GT 591
               +++ LPSS+ T    + F+      L       LPD  E  E  TVK       G 
Sbjct: 614 ----NLKYLPSSIFTLPNVVAFKFGGFSKLGESFRRFLPDRQEANESSTVKAMHFGNSGL 669

Query: 592 TIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNL 651
           +  ++ E L     +++LI S+N NL  +P  I+    LT L +S C  LQ +PE   NL
Sbjct: 670 SDEDIQEILIYFPKLEKLIASDN-NLVSLPACIKESDHLTKLDVSGCNMLQKIPEC-TNL 727

Query: 652 GLLSARNCTSLEKL 665
            +L+   C  LE +
Sbjct: 728 SILNVHGCVKLEHI 741


>gi|255568980|ref|XP_002525460.1| hypothetical protein RCOM_1122080 [Ricinus communis]
 gi|223535273|gb|EEF36950.1| hypothetical protein RCOM_1122080 [Ricinus communis]
          Length = 642

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 185/564 (32%), Positives = 265/564 (46%), Gaps = 145/564 (25%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRG+D RD F SHLH  L    I  FID+ + RG  IS SLL  IE S ++++I
Sbjct: 16  YDVFISFRGKDIRDGFLSHLHEALRQSQINAFIDESIERGKEISSSLLKIIEESHVSVVI 75

Query: 62  FSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDS 121
           F+E YA S W      P                                         DS
Sbjct: 76  FTENYADSPW------P-----------------------------------------DS 88

Query: 122 NVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWG 181
            +I      I E  N+V+   +        GLVG + S++ ++SLLC+  E    +R  G
Sbjct: 89  KLIGEVVSQILEKLNNVISSYNCA-----DGLVGNDSSVKAVKSLLCL--ESTDDVRFVG 141

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMRNIE 241
           I G+ +I     V N+ S +  GS   +  R            K+LL         RN++
Sbjct: 142 IRGMGEIEF--LVGNRAS-YCSGSRVVITSR-----------NKQLL---------RNMD 178

Query: 242 SQLNRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQW 301
           +++                                       Y +K+L Y +A  LF   
Sbjct: 179 AKI---------------------------------------YEVKKLNYLEALHLFSSH 199

Query: 302 AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIE 361
           AF G+HL   ++ L+  A+ YA G+PLALKV G  L G+S E WE  + KL+     +I+
Sbjct: 200 AFKGNHLKKEYMGLSRMAVTYAGGIPLALKVFGSNLYGKSIEEWEGELEKLKATSDQKIQ 259

Query: 362 EVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD-------------ASKSLINLD 408
            +L+IS+D LD  +K VFLDIACF +G  +D V  I D             + KSLI + 
Sbjct: 260 RMLRISFDGLDKKEKEVFLDIACFFKGGDKDAVTKILDSCGFFAKCGVSHLSDKSLITIS 319

Query: 409 LFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
               + MHDLL+ MG++IV +E     G+R+RLW  KDI++      GT   E ISLDM+
Sbjct: 320 SSNTLEMHDLLQQMGKDIVCEE--KELGQRSRLWDPKDIHK------GTRRTESISLDMS 371

Query: 469 KVNREIHMNSYAFSKMPKLRFLR----FYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKT 524
           K+   + ++S AF KM  LRFL+    F+G     +   LE +P  E+R L W + P+K+
Sbjct: 372 KIG-NMELSSTAFVKMYNLRFLKCYVGFWGKNRVLLPDGLEYMP-GELRFLYWDEFPMKS 429

Query: 525 L--NICAEKLVSLKMPCTKVEQLW 546
           L      E +V L+M  +K++QLW
Sbjct: 430 LPCKFRPENIVELQMKNSKLKQLW 453


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 221/699 (31%), Positives = 336/699 (48%), Gaps = 155/699 (22%)

Query: 122 NVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWG 181
           +V+R +S++I+ I  DVL++L   + ++ + LV V+ +IE IE LL    + + ++ IWG
Sbjct: 238 SVLRDDSQVIDNIVEDVLQKLSLMYPNELRDLVKVDKNIEHIELLL----KTIPRVGIWG 293

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKD----GNM 237
           + GI K TIA  +F K   +++   F   + E  E  G   ++ KLLSEL K      ++
Sbjct: 294 MSGIGKTTIAKQMFAKNFPYYDNVCFLEKINEESEKFGQIYVRNKLLSELLKQKITASDV 353

Query: 238 RNIESQL-NRLARKKVRIVFDDVTSG----------------SRVIITTRDKQVLKNCWA 280
             + + +  RL RKKV IV DDV +                 SR+IITTRD+  L     
Sbjct: 354 HGLHTFIKTRLFRKKVFIVLDDVDNATQLDDLCRVLGDLGPDSRIIITTRDRHTLSG-KV 412

Query: 281 NKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGR 340
           ++ Y +K     D+  LF   AF   H    +  L+++A+K A GVPLAL+VLG +   R
Sbjct: 413 DEIYEVKTWKLKDSLNLFSLRAFKKAHPLKGYERLSERAVKCAGGVPLALQVLGSHFHSR 472

Query: 341 SKEVWESAMRKLEIIPHV-------EIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDE 393
             E WES     E+  +V       EI++VL+ SY+ L   +K +FLDIA F +GE++D 
Sbjct: 473 EPEFWES-----ELNDYVKKGGAFHEIQKVLRASYNGLSWREKEMFLDIAFFFKGENKDI 527

Query: 394 VISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNR 440
           V  I DA              K+LI +    RI+MHDLL+ M  +IVR+E  N  GK +R
Sbjct: 528 VTRILDAYGYNATSGIKILEDKALITISNNDRIQMHDLLQKMALDIVREE-YNDRGKCSR 586

Query: 441 LWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFY--GDKNK 498
           L    DI  VL  N G++AIEGI  D+++   +IH+ +  F  M KLRFL+F+    K K
Sbjct: 587 LRDATDICDVLGNNKGSDAIEGIIFDLSQ-KVDIHVQADTFKLMTKLRFLKFHIPNGKKK 645

Query: 499 CMVSHLEG--VPFAE-VRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP 553
               HL    +PF + +++LEW   PLK+L     AE+L+ + +P + +E LW  +Q + 
Sbjct: 646 LGTVHLPENIMPFFDKLKYLEWNGYPLKSLPEPFHAEQLIQICLPHSNIEHLWHGMQEV- 704

Query: 554 SSLCTFKTPITFEIID---CKMLERLPD-------------------------------- 578
                    +  E+ID   CK    LPD                                
Sbjct: 705 ---------VNLEVIDLSECKKFRSLPDLSGALKLKQLRLSGCEELCELQPSAFSKDTLD 755

Query: 579 -----------------ELENLEYLTVKG---------------------TTIRELPESL 600
                             L +L+Y +VKG                     T I+ L  SL
Sbjct: 756 TLLLDRCIKLESLMGEKHLTSLKYFSVKGCKSLKEFSLSSDSINRLDLSKTGIKILHPSL 815

Query: 601 GRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE-----RLQTLPELPCNLGLLS 655
           G ++ +  L L  + NL  +P  + HL  LT L +S C      +L+ L +    L LL 
Sbjct: 816 GDMNNLIWLNL-EDLNLTNLPIELSHLRSLTELRVSKCNVVTKSKLEALFDGLTLLRLLH 874

Query: 656 ARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEI 694
            ++C +L +LPA +SS+ S+      + L+LD + + E+
Sbjct: 875 LKDCCNLIELPANISSLESL------HELRLDGSSVEEL 907



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 27/151 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF+SFRGEDTR NFT+ LH  L+ +SI+++ID  L++GD +  +L   I+ S ++I++
Sbjct: 8   YDVFISFRGEDTRTNFTAQLHRALTDRSIESYIDYSLVKGDEVGPALAEAIKDSHMSIVV 67

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRK--- 97
           FS+ YA+S+W                      FY +DPSHVR Q  S+   F+R  +   
Sbjct: 68  FSKDYATSKWCLDELLQILHCRELFGQVVIPVFYNIDPSHVRHQKESYEMAFARYERDLV 127

Query: 98  ---RFPEKMKRWKNALTEAADLSGFDSNVIR 125
               + +++  W+ AL  AA++SG+DS   R
Sbjct: 128 NSISYVDRVSEWRAALKMAANISGWDSRKYR 158



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 47/297 (15%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ELP ++  L  +  L L + S++E +P SI++LS+L    + +C +L+ LPELP ++   
Sbjct: 883  ELPANISSLESLHELRL-DGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEF 941

Query: 655  SARNCTSLEKLPA----GLSSMSSVLYVNLCN--FLKLDPNELSEIVKDG--WMKHSLYE 706
             A NCTSL  +       ++ +    Y++  N   L+LD   L  I +D    MK + + 
Sbjct: 942  QADNCTSLITVSTLKTFSINMIGQKKYISFKNSIMLELDGPSLDCITEDAVLTMKSAAFH 1001

Query: 707  ERGIKKSMY-------------FPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFA 753
               ++K  +              PG  +P+ F+H+S  SS+            +K +   
Sbjct: 1002 NVLVRKYRFQTHSFNYNRAEVCLPGRRVPREFKHRSTTSSSI-------TVNISKSLGCI 1054

Query: 754  FCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSE-GHLYSWFLGKISYVESDHVF 812
            F AVVV P+       ++ +  +   +   C       E G+   W    I+ +  DH+F
Sbjct: 1055 F-AVVVSPS------KRTQQHGYFVGMRCQCYTEDGSREVGYKSKWDHKPITNLNMDHIF 1107

Query: 813  LGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERG-------EVKKCGIHFVYAQDS 862
            +  + +   ++         +I   F    Y   G        +K+CG+  +Y  +S
Sbjct: 1108 VWYDPY---HYDSILSSIGRKISFKFCIKTYTSSGRELDGLLSIKECGVCPIYYSES 1161


>gi|297811953|ref|XP_002873860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319697|gb|EFH50119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 231/841 (27%), Positives = 370/841 (43%), Gaps = 167/841 (19%)

Query: 4   VFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIIIFS 63
           VF++FRG + R NF SHL   L    I  FID     G  ++  LL  IE S IA+ IFS
Sbjct: 12  VFINFRGVELRYNFVSHLKKGLKRNGINAFIDTDEDMGQELN-ILLKRIEGSKIALAIFS 70

Query: 64  ERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPEK 102
            RY  S W                      FY+V+PS V++Q   FG +F  L +   E+
Sbjct: 71  PRYTESDWCLKELAKMKECREQGKLVVIPIFYKVEPSTVKRQKGEFGDNFRDLVEFIDEE 130

Query: 103 MKR-WKNALTEAADLSGFDSNVIRPESKLIEEIANDVLK-----------RLDATF---- 146
            K  W  AL     L+GF  N    E  LI ++  +V K           RL+ T     
Sbjct: 131 TKNNWTEALKSIPLLTGFVLNENSDEDDLIFKVVKEVKKALNIISRAPPNRLEGTVLSST 190

Query: 147 --QSKNKGLVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFE 203
             Q K +   GV+  ++++E  L  G E   ++  + G+ GI K T+   ++ K+   F 
Sbjct: 191 VHQKKLESSCGVDLRLKQLEEKLSFGFEDTTRIIGVVGMPGIGKTTLVKKLYEKLKNEFL 250

Query: 204 GSYFALNVREAEETGGIKDLQKKLLSELSKDGN------MRNIESQLNRLARKKVRIVFD 257
                L++ E     G+  L   LL +L K  N          E   ++L + K  ++ D
Sbjct: 251 SHVLILDIHETSREQGLSYLPTILLEDLLKVKNPMFETVQAAHEGYKDQLLKTKSLVILD 310

Query: 258 DVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQW 301
            V++                GS+++I T D  ++ +   +  Y++ +L Y D+ + F  +
Sbjct: 311 HVSNKEQIAAILGKCDWIKQGSKIVIATGDTSLIHD-LVDDIYQVPQLSYKDSLQQFTHY 369

Query: 302 AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAM------------ 349
           A G      S ++L+   + Y +G PLALKVLG  L G+ + +W S +            
Sbjct: 370 AIGDQSNAQSFLKLSIDFVHYTKGNPLALKVLGAELLGKDESLWNSKLDSLSQHHKGRAR 429

Query: 350 --RKLEIIPHVE-IEEVLKISYDSLDDSQKNVFLDIACF--LEGEHRDEVISIFDASKS- 403
             RK+      E ++ V K  YD L   Q++  LDIACF  L+  +   ++   DA+ + 
Sbjct: 430 SSRKIRAQSSSEMLQSVWKECYDGLSQQQQDTLLDIACFRSLDKNYVASLLDSHDANSTE 489

Query: 404 -------LINLDLFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK 452
                  L+N  L      +I MHD L    +E+ R+ +      R RLW +  I  VL+
Sbjct: 490 ARIEIEKLMNKFLITISAGKIEMHDTLHMFCKEVGREATAPDGKGRRRLWDYHTIIDVLE 549

Query: 453 KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKC---------MVSH 503
            N G  ++  I LD+  +N    ++S AF+ M  +RFL+ Y   N C         M+  
Sbjct: 550 NNKGV-SVRSIFLDLADLNMNNSLHSQAFNLMSNIRFLKIY---NTCCPQECDRDIMLKF 605

Query: 504 LEG--VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD---DVQRLP--- 553
            +G  +PF E+R L W + PLK L  +   + LV LK+  +++E++W+   D  +L    
Sbjct: 606 PDGLELPFDELRCLHWLKFPLKELPPDFDPKNLVDLKLHYSEIERVWEGNKDASKLKWID 665

Query: 554 ----------SSLCTFKTPITFEIIDCKMLERLPDELENLE---YLTVKG-TTIRELPES 599
                     S L   +      +  C  L  LP ++EN++   +L ++G T+++ LPE 
Sbjct: 666 FNHSRKLYTLSGLAEARNLQELNLEGCIALATLPQDMENMKCLVFLNLRGCTSLKYLPEI 725

Query: 600 LGRLSWVKRLILSNNSN--------------------LERIPESIRHLSKLTFLFISHCE 639
              L  ++ LILS+ S                     ++ +P  IR+L +L  L +  C+
Sbjct: 726 --NLISLETLILSDCSKFKVFKVISEKLEAIYLDGTAIKELPSDIRNLQRLVLLNMKGCK 783

Query: 640 RLQTLPELPCNLGLLSA------RNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSE 693
           +L+TLP+   +LG L A        C+ L+  P    +M      N    L LD   + E
Sbjct: 784 KLKTLPD---SLGELKALQELILSGCSKLQSFPEVAKNM------NRLEILLLDETAIKE 834

Query: 694 I 694
           +
Sbjct: 835 M 835



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 161/377 (42%), Gaps = 57/377 (15%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP-LKTLNICAEKLVSLKMPCTKV 542
            M  ++ L F   +    + +L  +    +  L    C   K   + +EKL ++ +  T +
Sbjct: 702  MENMKCLVFLNLRGCTSLKYLPEINLISLETLILSDCSKFKVFKVISEKLEAIYLDGTAI 761

Query: 543  EQLWDDVQRL-----------------PSSLCTFKTPITFEIIDCKMLERLPDELEN--- 582
            ++L  D++ L                 P SL   K      +  C  L+  P+  +N   
Sbjct: 762  KELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKALQELILSGCSKLQSFPEVAKNMNR 821

Query: 583  LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQ 642
            LE L +  T I+E+P        ++ L LS N  + R+PE+I   S+L +L + +C+ L 
Sbjct: 822  LEILLLDETAIKEMPNIFS----LRYLCLSRNEKICRLPENISQFSRLKWLDMKYCKSLT 877

Query: 643  TLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKH 702
             LP+LP NL  L A  C+SL+ +   L+ + +  +++   F+    ++L +  K+   + 
Sbjct: 878  YLPKLPPNLQCLDAHGCSSLKSIVQPLAHVMATEHIH-STFIFTKCDKLEQAAKE---EI 933

Query: 703  SLYEERG------------------IKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPA 744
            S Y +R                   I  S  FPG EIP WF HQ++GS   +K   P+  
Sbjct: 934  SSYSQRKCQILPSALKLCNKDLVPEILFSTCFPGGEIPPWFYHQAIGSK--VKFESPQHW 991

Query: 745  GYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKIS 804
             YNKL   AFCAVV F       R +    +   +V   C            +W +G  +
Sbjct: 992  KYNKLSGIAFCAVVSFQNCQDQTRTEREHTNC-LSVKFTCTSTTDAEPCTETTWKVGSWT 1050

Query: 805  -------YVESDHVFLG 814
                     ESDHVF+G
Sbjct: 1051 EQGNNKDTTESDHVFIG 1067


>gi|357499557|ref|XP_003620067.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495082|gb|AES76285.1| Disease resistance-like protein [Medicago truncatula]
          Length = 511

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 172/494 (34%), Positives = 267/494 (54%), Gaps = 52/494 (10%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQ-LIRGDNISQSLLGTIEASCIAII 60
           Y VFLSFRG DTR  FT +L+  L+ K I TFIDD  L RGD I+ SLL  I+ S I I 
Sbjct: 18  YQVFLSFRGTDTRHGFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLLKAIDESRIFIP 77

Query: 61  IFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFD 120
                        + V+P+ VR +  S+G   + L        +RWK AL++AA+LSG+ 
Sbjct: 78  TKGRLVLP---VLFGVEPTIVRHRKGSYGEALAEL--------QRWKVALSQAANLSGYH 126

Query: 121 SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSE-GVCKLRI 179
            +    E + I EI   +  +            VG++  +++++SLL   S+ GV  + +
Sbjct: 127 DSPPGYEYEFIGEIVKYISNKTSRQPLHVANYPVGMKSRVQQVKSLLDERSDDGVHMVGL 186

Query: 180 WGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSE-----LSKD 234
           +G GG+ K T+A A++N I+  FE S F  NVRE   +  +K LQ +LL +     +   
Sbjct: 187 YGTGGLGKSTLAKAIYNFIADQFECSCFLENVRENSASNKLKHLQLELLLKTLQLEIKFG 246

Query: 235 GNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNC 278
           G    I     RL RKKV ++ DDV +                GS+VIITTRDK +L  C
Sbjct: 247 GVSEGIPYIKERLHRKKVLLILDDVDNMKQLHALAGGPDWFGRGSKVIITTRDKHLL-TC 305

Query: 279 WANKKYRMKELVYADAHKLFCQW-AFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYL 337
              K     E +Y        +W AF  D++ + + E+ ++A+ YA G+PL ++++G  L
Sbjct: 306 HGIKSMHEVEGLYGTEALELLRWMAFKSDNVPSGYEEILNRAVAYASGLPLVIEIVGSNL 365

Query: 338 CGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISI 397
            G++ E W++ +   + IP+ EI+++LK+SYD+L++ Q++VFLDIAC  +    ++   I
Sbjct: 366 SGKNIEEWKNTLDGYDRIPNKEIQKILKVSYDALEEEQQSVFLDIACCFKRCKWEDAKYI 425

Query: 398 FDASKS---------LINLDLFYRIR-------MHDLLRDMGREIVRKESINHPGKRNRL 441
            ++            L+   L  ++R       +HDL+ DMG+E+VR+ESI  PG+R+RL
Sbjct: 426 LNSHYGHCITHHLGVLVEKSLIKKLREYDDYVMLHDLIEDMGKEVVRQESIKEPGERSRL 485

Query: 442 WHHKDIYQVLKKNT 455
               DI +VL++NT
Sbjct: 486 CCQDDIVRVLRENT 499


>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1108

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 205/713 (28%), Positives = 339/713 (47%), Gaps = 94/713 (13%)

Query: 50  GTIEASCIAIIIFSERYASSRW---------------------FFYRVDPSHVRKQSHSF 88
           G +  S + IIIFS+ YASSR                       F++V  + +R Q+ SF
Sbjct: 278 GMLHRSRVGIIIFSKNYASSRQCQGEFVAIMDHSKANSLVLLPVFFKVKVTDIRGQNGSF 337

Query: 89  GRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQS 148
           GR FSRL             ++ +   + G        E  L + I +DV   L +    
Sbjct: 338 GRAFSRLEDSVQGSQVPTLTSINKYQYMKG-------EEVILAKNIVSDVCLLLSSESNM 390

Query: 149 KNKGLVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYF 207
           K +G       +  I SLL         +  +WG+ GI K TI+  +F   +  ++  YF
Sbjct: 391 KLRG----RLQMNSILSLLKFSQSSAPHIVGLWGMAGIGKTTISREIFRTQAERYDVCYF 446

Query: 208 ALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQL----NRLARKKVRIVFDDVTS 261
             +     +T G+  L+ +  S +S +  +     +++L    +R   KKV IV D V++
Sbjct: 447 LPDFHIVCQTRGLSHLRDEFFSIISGEEKVTVGACDTKLGFIRDRFLSKKVLIVLDGVSN 506

Query: 262 ----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGG 305
                           G  +I+T+R++QVL  C A + Y ++ L   ++  L  Q  F  
Sbjct: 507 AREAEFLLGGFGWFSGGHTLILTSRNRQVLIQCNAKEIYEIQNLSEHESLHLCSQ--FVS 564

Query: 306 DHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLK 365
           + +      L  + + YA G+PLAL  LG  L  +  +  +  +++L   P VEI++  K
Sbjct: 565 EQIWTGRTPLVSELVYYASGIPLALCALGSSLQNQCIDDEKQHLKRLRQHPLVEIQDAFK 624

Query: 366 ISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDASKSLINLDLF------------YRI 413
            S++ LD ++KN FLD ACF  G ++D V++I D    L  L ++             RI
Sbjct: 625 RSFNVLDSNEKNTFLDFACFFRGGNKDHVVNILDGCGFLTELGIYGLLDESLISLVGNRI 684

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
              ++ +D GR +VR+E+ N  GKR+RLW   DI  VL  N+GTEAIEGI LD + +  E
Sbjct: 685 ETPNIFQDAGRFVVRQEN-NERGKRSRLWDPTDIVDVLTNNSGTEAIEGIFLDASCLTFE 743

Query: 474 IHMNSYAFSKMPKLRFLRFY--GDKNKCMVSHLEG---VPFAEVRHLEWPQCPLKTL--N 526
             ++  AF KM +LR L+ Y     N C VS  +G   +P  E+R L W + PL +L  N
Sbjct: 744 --LSPTAFEKMYRLRLLKLYCPTSDNSCKVSLPQGLYSLP-DELRLLHWERYPLGSLPRN 800

Query: 527 ICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP--DELENLE 584
              + +V L MP + + +LW   + L       K  I   +   + L + P   + +NLE
Sbjct: 801 FNPKNIVELNMPYSNMTKLWKGTKNLEK----LKRII---LSHSRQLTKFPSLSKAKNLE 853

Query: 585 YLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQT 643
           ++ ++G T++ ++  S+     +  L L + S L  +P ++ HL  L  L +S C  L+ 
Sbjct: 854 HIDLEGCTSLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATV-HLEALEVLNLSGCSELED 912

Query: 644 LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           L +   NL  L     T++ ++P+ +  ++ ++ ++L  CN L+  P E+S +
Sbjct: 913 LQDFSPNLSELYLAG-TAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNL 964



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 570 CKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
           C  LE L D   NL  L + GT I E+P S+G L+ +  L L N + L+ +P  I +L  
Sbjct: 907 CSELEDLQDFSPNLSELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKA 966

Query: 630 LTFL 633
           +  L
Sbjct: 967 VVSL 970


>gi|4588062|gb|AAD25972.1|AF093645_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1304

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 181/592 (30%), Positives = 286/592 (48%), Gaps = 81/592 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+H L    I TF  DD+L +G+ I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYHFLCRYKIHTFRDDDELRKGEEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + +E+  D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADEVLADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSEL----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+ E+          + D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVYEILRIDSGSVGFNNDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 359 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VW+  +++L    ++ E+ + LKI
Sbjct: 419 PPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIGVWKDTLQQLRKTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++                 IF   + +I +    + 
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEVPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDKF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--- 470
           +MHD LRDMGREIVR+E I  P KR+R+W  ++   +L    G+  ++ IS+    V   
Sbjct: 539 KMHDQLRDMGREIVRREDI-RPWKRSRIWSREEGIDLLLNKKGSSIVKAISMVPPWVSWD 597

Query: 471 -NREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCP 521
            N +    S  F  + +LR+  FY D    +      +    + +L+W + P
Sbjct: 598 NNVKYEFKSECFLNLSELRY--FYADPTILLTGDFNNL----LPNLKWLELP 643


>gi|227438141|gb|ACP30560.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 823

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 224/839 (26%), Positives = 365/839 (43%), Gaps = 179/839 (21%)

Query: 163 IESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE-----ET 217
           +++LLC+ S+ V  + IWG  GI K TIA A++N+   +F+ S F  NV E+      ++
Sbjct: 1   MKTLLCLESQEVRLVGIWGPAGIGKTTIARALYNQFHENFKLSIFMENVSESYGGTNLDS 60

Query: 218 GGIK-DLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDVTS------------- 261
            G+K  LQ++ LS+L     +R  ++ +   RL  +KV  V DDV +             
Sbjct: 61  YGLKLGLQQRFLSKLLDQHGLRIHHLGAIKERLKNQKVLAVLDDVDNIEQLQALAKETQW 120

Query: 262 ---GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDK 318
               SR+I+TTR+KQ+L +   +  Y++      +A  +FCQ AF   +      ++  +
Sbjct: 121 FGNKSRIIVTTRNKQLLISHNISHVYKVPFPSREEALAIFCQHAFRECYPSDDFKDIAIE 180

Query: 319 AIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNV 378
               A  +PL L+VLG ++ G+SKE WE ++  L+     EIE++LK+ Y+ L    K +
Sbjct: 181 FATLAGHLPLGLRVLGSFMRGKSKEEWEVSLPTLKTRLTGEIEKLLKVGYEGLHKDDKAL 240

Query: 379 FLDIACFLEGEH----RDEVISIFD----------ASKSLINLDLFYRIRMHDLLRDMGR 424
           FL IAC   G H    +  V++  D          A +SLI + +  ++ MH LLR +GR
Sbjct: 241 FLHIACLFNGHHETYVKQMVVANSDLDVSFGLKVLADRSLIQIYVDGKVVMHSLLRQLGR 300

Query: 425 EIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKM 484
           E+VR++S++ PGKR  L   ++I  VL  NTGT+++ G+S+DM  +N + ++N  AF  M
Sbjct: 301 EVVREQSVDEPGKRQFLMSAREICGVLSNNTGTDSVLGMSVDMCDLNEDFYINEKAFENM 360

Query: 485 PKLRFLRFY----GDKNKCMVSHLEGVPF-AEVRHLEWPQCPLKTL--NICAEKLVSLKM 537
             L ++R Y     + NK  +   +G+ +  ++R L+W   P   L      E LV L M
Sbjct: 361 RNLLYIRIYRSNDANPNKMKLPD-DGLSYLPQLRLLQWDAYPHMFLPSRFRTECLVELSM 419

Query: 538 PCTKVEQLWDD-----------------------------------------VQRLPSSL 556
             +K++ LW D                                         +  LPSS+
Sbjct: 420 SHSKLKTLWGDNAQPLRNLKNMNLSNSPNLESFPNLLEATKLERLDLSWCESLVELPSSI 479

Query: 557 CTFKTPITFEIIDCKMLERLPDELE-----------------------NLEYLTVKGTTI 593
                    E+  C  LE LP  +                        NL YL +KGT I
Sbjct: 480 QNLHKLSLLEMSCCTSLEILPTNINLASLSRLHFRNCLRLKTFPEISTNLNYLKIKGTAI 539

Query: 594 RELPESLGRLSW----------------------VKRLILSNNSNLERIPESIRHLSKLT 631
            E+P S+   SW                      +  L L  N+ L  I   +  L +L 
Sbjct: 540 TEVPPSVK--SWRRIEEICMESTEVRILMNLPYILDTLCLRGNTKLVAIANYLIRLRRLR 597

Query: 632 FLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNEL 691
            + IS C  L  LP+LP ++  L+A NC SL++L     + S  + +   N LKLD N  
Sbjct: 598 MIDISFCVSLVYLPKLPYSVRYLTAFNCESLQRLHGPFRNPS--IRLKFTNCLKLDHNAQ 655

Query: 692 SEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLIS 751
             I             + +   +  PG ++P +F H+  G+S                  
Sbjct: 656 EMI------------HQSVFDVVILPGGQVPAYFTHRYNGNSG--------------FYH 689

Query: 752 FAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESDHV 811
           F F   V F +F       +G   ++    +    ++       Y++ L +   ++ DH+
Sbjct: 690 FTFDGSVSFYSFKVCLVLAAG-TRFESCHTSFYTSFRGDPIKKYYTYMLNQ-PQLKVDHI 747

Query: 812 FLGCNSFGGEYFGPNY--------DEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDS 862
            +       +Y GP Y          F F  +C++         +V +CG+ F+ A+ S
Sbjct: 748 CMFECVLSPDYDGPPYLGTRPSTTKLFKFDFNCNYG-------CKVLECGVLFLEARKS 799


>gi|4588052|gb|AAD25967.1|AF093640_1 flax rust resistance protein [Linum usitatissimum]
 gi|4588058|gb|AAD25970.1|AF093643_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1301

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 178/564 (31%), Positives = 274/564 (48%), Gaps = 75/564 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT  L+H L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + +E+  D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKDDEQGAITDEVLADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSEL----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+SE+          + D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 359 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPHSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VW+  +++L    ++ E+ + LKI
Sbjct: 419 PPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIGVWKDTLQQLRKTLNLNEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++                 IF   + +I +    + 
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEVPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDKF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--- 470
           +MHD LRDMGREIVR+E I  P KR+R+W  ++   +L    G+  ++ IS+    V   
Sbjct: 539 KMHDQLRDMGREIVRREDI-RPWKRSRIWSREEGIDLLLNKKGSSKVKAISMVPPWVSWD 597

Query: 471 -NREIHMNSYAFSKMPKLRFLRFY 493
            N +    S  F  + +LR+   Y
Sbjct: 598 NNVKYEFKSECFLNLSELRYFYAY 621


>gi|15235064|ref|NP_193688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2853080|emb|CAA16930.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268749|emb|CAB78955.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|332658795|gb|AEE84195.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1167

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 230/836 (27%), Positives = 379/836 (45%), Gaps = 152/836 (18%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VFL+FRG++ R+NF SHL   L  K I  FID+ + +G+N+  +L   IE S IA+ I
Sbjct: 15  HQVFLNFRGDELRNNFVSHLDKALRGKQINVFIDEAVEKGENLD-NLFKEIEKSRIALAI 73

Query: 62  FSERYASSRW-------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFPE- 101
            S++Y  S+W                    FY V+P+ VR Q  +FG   ++ ++   + 
Sbjct: 74  ISQKYTESKWCLNELVKMKELEGKLVTIPIFYNVEPATVRYQKEAFGAALTKTQENDSDG 133

Query: 102 KMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRL------DATFQSKNKG- 152
           +MK+WK ALT  + L G  F+S     E+ LI++I + VL++L      ++T  S ++G 
Sbjct: 134 QMKKWKEALTYVSLLVGFPFNSKSKEKETTLIDKIVDAVLQKLSKISSEESTSGSVDQGR 193

Query: 153 -----------LVGVECSIEEIESLLCIGSEGVCKLRI---WGIGGISKITIAGAVFNKI 198
                      + G+   ++E+E  + I  +   + RI    G+ GI K T+  A +   
Sbjct: 194 GEEVEEAKADKISGLNQRLKELEEKVAITGDKRDETRIVEVVGMPGIGKSTLLKAFYETW 253

Query: 199 SRHFEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNM--RNIESQLNRLARKKVRIVF 256
              F  S    N+ E  +  G+  L   LL EL  D N+     E    +L +  V IV 
Sbjct: 254 KTRFLSSALLQNISELVKAMGLGRLTGMLLKELLPDENIDEETYEPYKEKLLKNTVFIVL 313

Query: 257 DDVTS-----------------GSRVIIT----TRDKQVLKNCWANKKYRMKELVYADAH 295
           D ++                  GS+++I     TRD  + ++      Y +  L + D  
Sbjct: 314 DGISDETHIQKLLKDHRKWAKKGSKIVIARRAVTRD-LLHEDSMVRYTYFVPLLSHRDGL 372

Query: 296 KLFCQWAF----GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRK 351
             FC +AF       +   + ++ + + ++YA+G PL LK+LG  L  +S   WE  ++ 
Sbjct: 373 NHFCHYAFRHFAAHQNNKEAFMKESKEFVRYARGHPLILKLLGEELREKSLSYWEEKLKS 432

Query: 352 LEIIPHVEI-EEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-----SKSLI 405
           L       I + VL+++YD L   QK+ FLDIACF        V S+ D+     SK+ +
Sbjct: 433 LPKSLSQNIRDRVLQVTYDELSQVQKDAFLDIACF-RSHDLVYVKSLLDSSGPAFSKATV 491

Query: 406 NLD------LFY----RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD------IYQ 449
            +D      + Y    R+ MHDLL     E+  +   +    R+R+WHH +      + +
Sbjct: 492 TIDALKDMFMIYISDSRVEMHDLLYTFAMELGPEARDDDGRGRHRIWHHHNQDNKGRLNR 551

Query: 450 VLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGD--KNKCMVS---HL 504
           +LK+  G+ ++    LDM  +  ++ + +     M  LR+L+FY      +C      H+
Sbjct: 552 LLKRPGGSTSVRSFFLDMYVMKTDVTLGTDYLKNMRNLRYLKFYSSHCPQECTPKENIHI 611

Query: 505 EG---VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLP------ 553
            G   +P  EVR L W   P   L  +   + LV LK+P +K+ Q+W + +  P      
Sbjct: 612 PGELELPLEEVRCLHWLNFPKDELPQDFIPKNLVDLKLPYSKIRQIWREEKDAPKLRWVD 671

Query: 554 -------SSLCTFKTPITFEIID---CKMLERL---PDELENLEYLTVKGTT-IRELPES 599
                   +L      +  E ++   C  L+ L   P+ + +L +L +KG T +  LP+ 
Sbjct: 672 LNHSSKLENLSGLSQALNLERLNLEGCTALKTLLLGPENMASLVFLNLKGCTGLESLPKI 731

Query: 600 LGRLSWVKRLILSNNSNLER--------------------IPESIRHLSKLTFLFISHCE 639
              L  +K LILSN SNLE                     +P+ +  L+ L  L++  CE
Sbjct: 732 --NLRSLKTLILSNCSNLEEFWVISETLYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCE 789

Query: 640 RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLC-NFLKLDPNELSEI 694
            L  LPE    L +L    C+  ++    LSS+  V+    C   L LD   +++I
Sbjct: 790 MLVKLPEEFDKLKVLQELVCSGCKR----LSSLPDVMKNMQCLQILLLDGTAITKI 841



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 181/421 (42%), Gaps = 66/421 (15%)

Query: 484  MPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLE---WPQCP-LKTLNICAEKLVSLKMPC 539
            M  L FL   G       + LE +P   +R L+      C  L+   + +E L +L +  
Sbjct: 711  MASLVFLNLKG------CTGLESLPKINLRSLKTLILSNCSNLEEFWVISETLYTLYLDG 764

Query: 540  TKVEQLWDDVQRLPSSLCTF--------KTPITFEIID---------CKMLERLPDELEN 582
            T ++ L  D+ +L S +  +        K P  F+ +          CK L  LPD ++N
Sbjct: 765  TAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKVLQELVCSGCKRLSSLPDVMKN 824

Query: 583  ---LEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCE 639
               L+ L + GT I ++P     +S ++RL LS N  +  +   IR LS+L +L + +C 
Sbjct: 825  MQCLQILLLDGTAITKIP----HISSLERLCLSRNEKISCLSNDIRLLSQLKWLDLKYCT 880

Query: 640  RLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGW 699
            +L ++PELP NL  L A  C SL  +   L++      ++   F+  + ++L    K+G+
Sbjct: 881  KLVSIPELPTNLQCLDANGCESLTTVANPLATHLPTEQIH-STFIFTNCDKLDRTAKEGF 939

Query: 700  MKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVV- 758
            +  +L+       S  FPG E+P WF H+++GS   L   P      N+ +  A CAVV 
Sbjct: 940  VPEALF-------STCFPGCEVPSWFCHEAVGSVLKLNLLP--HWNENRFVGIALCAVVG 990

Query: 759  VFPAFLKYFRHKS--------GEDDWDGNVYAVCCD-----WKRKSEGHLYSWFLGKISY 805
              P   +     S         +D   G+ Y +  D     W +   G+       K+  
Sbjct: 991  SLPNCQEQTNSCSVTCTFNIASKDSKKGDPYKISFDRLVGRWNK--HGNKLDKKGNKLKK 1048

Query: 806  VESDHVFLGCNSFGGEYFGPNYDEFS-----FRIHCSFHFPPYLERGEVKKCGIHFVYAQ 860
             ESDHVF+ C +          D+ S           F       R EV KCG+  VYA 
Sbjct: 1049 TESDHVFI-CYTRCSNSIKCLQDQHSGTCTPTEAFLEFGVTDKESRLEVLKCGLRLVYAS 1107

Query: 861  D 861
            D
Sbjct: 1108 D 1108


>gi|4588060|gb|AAD25971.1|AF093644_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1301

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 178/564 (31%), Positives = 274/564 (48%), Gaps = 75/564 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRG DTR  FT  L+H L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + +E+  D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKDDEQGAITDEVLADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSEL----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+SE+          + D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 359 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPHSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VW+  +++L    ++ E+ + LKI
Sbjct: 419 PPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIGVWKDTLQQLRKTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++                 IF   + +I +    + 
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEVPYYMWTDCNFYPASNIIFLIQRCMIQVGDDDKF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKV--- 470
           +MHD LRDMGREIVR+E I  P KR+R+W  ++   +L    G+  ++ IS+    V   
Sbjct: 539 KMHDQLRDMGREIVRREDI-RPWKRSRIWSREEGIDLLLNKKGSSKVKAISMVPPWVSWD 597

Query: 471 -NREIHMNSYAFSKMPKLRFLRFY 493
            N +    S  F  + +LR+   Y
Sbjct: 598 NNVKYEFKSECFLNLSELRYFYAY 621


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 249/895 (27%), Positives = 363/895 (40%), Gaps = 240/895 (26%)

Query: 151 KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALN 210
           K LVG+   +E++ +L+ +G   V  + IWG+GGI K TIA AVF  I   FE + F  +
Sbjct: 2   KNLVGINSRVEQVITLIGLGLNDVRFIGIWGMGGIGKTTIARAVFETIRCSFEVTCFLAD 61

Query: 211 VREAEETGGIKDLQKKLLSELSKDGNMR--------------------------NIESQL 244
           VRE  E   I  +QK+LL +++   N                            N E QL
Sbjct: 62  VRENCEKKDITHMQKQLLDQMNISSNAVYNKYDGRTIIQNSLRLKKVLLVLDDVNHEKQL 121

Query: 245 NRLARKKVRIVFDDVTSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFG 304
             LA +K          GSR+IITTRD  +L+    ++ Y ++ LV  +A  LF   AF 
Sbjct: 122 EDLAGEKAWF-----GPGSRIIITTRDFHLLRKNKLHETYNVEGLVENEALNLFSLEAFN 176

Query: 305 GDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVL 364
                   + L+ + +KY+ G+PLALKVLG YL GR  EVW SA+ K++   H EI +VL
Sbjct: 177 LPKPSEEFLALSKEVVKYSGGLPLALKVLGSYLNGRGIEVWHSAIEKIKHFSHSEIIDVL 236

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF-----DA--------SKSLINLDLF- 410
           KISYD LDD +K++FLDIACF +G  +  V  I      DA        ++SLI +D + 
Sbjct: 237 KISYDGLDDMEKDIFLDIACFFKGWQKHHVTEILKRCGHDAEIGIDILINRSLITIDKYD 296

Query: 411 --YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMN 468
             Y + MHDLL +MG+ IV +ES N   KR+RLW  +D+  VL +   T+A  GI L   
Sbjct: 297 YDYWLGMHDLLEEMGKRIVIQESQNVVCKRSRLWCLEDVEFVLTQKKKTKATHGIVLHEW 356

Query: 469 KVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTLNIC 528
               E++    +FSK+ +L+ L   G K   +      +P   ++   W +CP+KTL + 
Sbjct: 357 YSETEVNQRDLSFSKLCQLKLLILDGAKAPILCD----IP-CTLKVFCWRRCPMKTLPLT 411

Query: 529 AEK---LVSLKMPCTKVEQLWD-----------------------DVQRLPS-------- 554
             +   LV + +  +++ +LWD                       D+   P+        
Sbjct: 412 DHQRYELVEINLSKSQIAELWDGKKVLENLEHLYLSWCKQLKQTPDLSGAPNLKKLNLRG 471

Query: 555 ---------SLCTFKTPITFEIIDCKMLERLPDELE------------------------ 581
                    SL   K  +   + DCK LE L D+LE                        
Sbjct: 472 CEELDYIHPSLAHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSSLRRLPEFGEC 531

Query: 582 --NLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSN------------------LERIP 621
              L  L ++ T I ELP +LG L+ V  L LS                      L  +P
Sbjct: 532 MKKLSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLVLRALP 591

Query: 622 E-----------------------------SIRHLSKLTFLFISH--------------- 637
           +                              I HL+ LT+L +S                
Sbjct: 592 QKTDGLESLTVRADYDDSDSSSREESTLSYDIAHLASLTYLDLSRNRFLRVPISIHQLPR 651

Query: 638 --------CERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPN 689
                   C+ L+ LPELP +L  L A+ C SL+K     S +  V+    C F      
Sbjct: 652 LTHLKLSFCDELEVLPELPSSLRELDAQGCYSLDK-----SYVDDVISKTCCGF------ 700

Query: 690 ELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKL 749
                        S  ++R     M   G EIP WF HQ      ++    P      ++
Sbjct: 701 -----------AESASQDREDFLQMMITGEEIPAWFEHQEEDEGVSVSF--PLNCPSTEM 747

Query: 750 ISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVESD 809
           ++ A C +                +  +G   +V C+ K       Y W         S 
Sbjct: 748 VALALCFLF---------------NGIEGLQPSVICNGKEFINASFYWW--------SSL 784

Query: 810 HVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGIHFVYAQDSAD 864
           +  L      G YF       + R    F +  +L    V++CG  +VY QD  D
Sbjct: 785 YNLLFIVCVNGYYFSKLLCHHN-RFQMLFPYADHLGI-RVQRCGARWVYKQDIQD 837


>gi|15242335|ref|NP_199334.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759606|dbj|BAB11394.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007834|gb|AED95217.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 697

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 193/683 (28%), Positives = 322/683 (47%), Gaps = 102/683 (14%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLL--GTIEASCIAII 60
           +VF+ F G +TR++F SHL      +S+   +      G + +  +    T E   + ++
Sbjct: 8   EVFIDFSGIETRNSFVSHLSAAFRRRSVSVCL------GGDCTDVVTPRKTNEGCKVFVV 61

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
           +FSE YA S+                      ++  V  S V++Q+  FG  F++ +  +
Sbjct: 62  VFSEDYALSKQCLDTLVEFLERKDDGLVIVPVYYGGVTESMVKQQTERFGVAFTQHQNNY 121

Query: 100 P-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVEC 158
             +++ +W++ L + A L G + N+ + +S+ +E+I  DV + LDAT      G +G+  
Sbjct: 122 SYDQVAKWRDCLIQTASLPGHELNLQQEDSEFVEKIVADVREVLDAT------GKIGIYS 175

Query: 159 SIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETG 218
            + EIE LLC  S     L +WG+ GI K TIA A F ++S+ F+ S+F  +  +    G
Sbjct: 176 RLLEIEKLLCKQSLKFYYLGLWGMPGIGKTTIAEAAFKQMSKDFDASFFVEDFHKEYHKG 235

Query: 219 GIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDD----------------VTSG 262
               L+++ L ++ K G++R        L  KKV  V DD                V+ G
Sbjct: 236 RPYKLREEHLKKVPKGGSIRGPILSFKELREKKVLFVLDDVRNLMDFESFLGGIEGVSPG 295

Query: 263 SRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-LDASHIELTDKAIK 321
           S +I+T+RDKQVL  C     + +  L   +A +LF + AF  +   DA  ++++ K  +
Sbjct: 296 SVIILTSRDKQVLHQCQVEDVFEVPSLNEEEAVRLFARTAFHKEGPSDAKLMDVSKKVAR 355

Query: 322 YAQGVPLALKVLG-CYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFL 380
           YA G P AL   G      +  E  E    K+   P  EI  + + SYD+L+D+++++FL
Sbjct: 356 YAGGNPKALCFYGRELEKKKKPEEMEEEFEKMRQCPPQEILSLFRSSYDALNDNERSIFL 415

Query: 381 DIACFLEGEHRDEVISIFD-------------ASKSLINLDLFYRIRMHDLLRDMGREIV 427
           DIACF  GE  D+V+ I +             A +SL+ +    R+ M   ++D  RE  
Sbjct: 416 DIACFFNGEPCDDVMRILEGCGFFPHVGIDRLAERSLLTISKEKRVEMQGFIQDAAREF- 474

Query: 428 RKESINHPGKRNRLWHHKDIYQVLK--KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMP 485
               IN   +R R W    I  +L+  K+ G E IEGI LD  K+  ++  N  AF  M 
Sbjct: 475 ----INQTSRRRRHWEPSRIRLLLENDKSKGNEVIEGIFLDTTKLTFDV--NPMAFENMY 528

Query: 486 KLRFLRFYGDKNKC-----MVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMP 538
            LR L+ Y   ++      +   L  +P+ E+R L W + PL++L  +     LV L MP
Sbjct: 529 NLRLLKIYSTHSETAQELRLTKELRSLPY-ELRLLHWEKYPLQSLPQDFDTRHLVELNMP 587

Query: 539 CTKVEQLWDDVQRLPS-------------SLCTFKTPITFEIID---CKMLERLP--DEL 580
            ++++ L    + L                +         E ID   C  L+ +P  D L
Sbjct: 588 YSQLQSLCVGTKSLAKLKMINLSHSQKLLEVDELAKACNLEKIDLQGCTSLKSIPHTDRL 647

Query: 581 ENLEYLTVKGTTIRELPESLGRL 603
           +NL++L + G T  +  E++ ++
Sbjct: 648 KNLQFLNLSGCTSIKRTEAIKKI 670


>gi|297741028|emb|CBI31340.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/408 (36%), Positives = 238/408 (58%), Gaps = 36/408 (8%)

Query: 83  KQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRL 142
           K   +  +H   L +   E++K W++ALTE A+LSG+DS   + E  LI+EI   +LK+L
Sbjct: 3   KFGEALAKHEENLEEN-GERVKIWRDALTEVANLSGWDSRN-KNEPLLIKEIVIKLLKKL 60

Query: 143 DATFQSKNK-GLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRH 201
             T+ S  +  LVG++  I+++  LLC+ S+ V  + I G+GGI K T+A A+++++S  
Sbjct: 61  LNTWTSDTEENLVGIQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQ 120

Query: 202 FEGSYFALNVREAEETGGIKDLQKKLLSELSKDGNMR--NIESQLNRLARKKVRIVFDDV 259
           FE   F L +    +   +  L +KLLS+L ++ N++     S   RL  +KV +V D+V
Sbjct: 121 FEACSF-LEIANDFKEQDLTSLAEKLLSQLLQEENLKIKGSTSIKARLHSRKVLVVLDNV 179

Query: 260 TS----------------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAF 303
            +                GSR+I+TTRD+++L     +  Y + E    +A +     + 
Sbjct: 180 NNLTILEHLAGNQDWFGQGSRIIVTTRDQRLLIQHKVDY-YEVAEFNGDEAFEFLKHHSL 238

Query: 304 GGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEV 363
             + L+    EL+ + I YA+G+PLAL+VLG  L G +K+ W   + KL+  P++EI+EV
Sbjct: 239 KYELLENDLQELSREIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEV 298

Query: 364 LKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA-------------SKSLINLDLF 410
           L++SYD LDD +KN+FLDIACF +GE +D V+ I                +KSLI ++  
Sbjct: 299 LRLSYDRLDDEEKNIFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFA 358

Query: 411 YRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTE 458
            ++ MHDL+++MG+ IVR+E    P +R+RLW H+DI+ VLK+N   E
Sbjct: 359 NKLEMHDLIQEMGKGIVRQECPKEPERRSRLWEHEDIFDVLKRNMVRE 406


>gi|356559378|ref|XP_003547976.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N [Glycine
           max]
          Length = 439

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 158/431 (36%), Positives = 236/431 (54%), Gaps = 52/431 (12%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YDVFLSFRGEDTR  FT +L++VL  + I TFIDD +   GD I+ +L   IE S I II
Sbjct: 8   YDVFLSFRGEDTRYGFTGYLYNVLRERGIHTFIDDDEPQEGDEITTALEAAIEKSKIFII 67

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           + SE YASS +                       FYRV+PS VR    SFG   +   K+
Sbjct: 68  VLSENYASSSFCLNSLTHILNFTKENNDVLVLPVFYRVNPSDVRHHRGSFGEALANHEKK 127

Query: 99  FP----EKMKRWKNALTEAADLSG--FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKG 152
                 EK++ WK AL + +++SG  F  +  + E K I+EI   V  + +      +  
Sbjct: 128 SNSNNMEKLETWKMALHQVSNISGHHFQHDGNKYEYKFIKEIVESVSNKFNHDHLHVSDV 187

Query: 153 LVGVECSIEEIESLLCIGSEGVCKL-RIWGIGGISKITIAGAVFNKISRHFEGSYFALNV 211
           LVG+E  + E++SLL +G + V  +  I G+ G+ K T+A AV+N I+ HFE S F  NV
Sbjct: 188 LVGLESPVLEVKSLLDVGRDDVVHMVGIHGLAGVGKTTLAIAVYNSIAGHFEASCFLENV 247

Query: 212 REAEET-GGIKDLQKKLLSELSKDGNMRNIESQL----NRLARKKVRIVFDDVTS----- 261
           +    T  G++ LQ  LLS+ + +  + N    +     +L +KKV ++ DDV       
Sbjct: 248 KRTSNTINGLEKLQSFLLSKTAGEIKLTNWREGIPIIKRKLKQKKVLLILDDVDEDKQLQ 307

Query: 262 -----------GSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDH-LD 309
                      GSR+IITTRD+ +L        Y+++EL    A +L  Q AF  +  +D
Sbjct: 308 ALIGSPDWFGLGSRIIITTRDEHLLALHNVKITYKVRELNEKHALQLLTQKAFELEKGID 367

Query: 310 ASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYD 369
            S+ ++ ++A+ YA G+P  L+V+G  L G+S E W+SA+   E IPH +I  +LK+SYD
Sbjct: 368 PSYHDILNRAVTYASGLPFVLEVIGSNLFGKSIEEWKSALDGYERIPHKKIYXILKVSYD 427

Query: 370 SLDDSQKNVFL 380
           +L++ +K++FL
Sbjct: 428 ALNEDEKSIFL 438


>gi|7268442|emb|CAB80962.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1072

 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 227/798 (28%), Positives = 347/798 (43%), Gaps = 139/798 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F S+L      +SI TF+D  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSNLLEAFDRRSINTFMDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY VDPS VRKQ+  FG  F +  +   
Sbjct: 72  FSKNYASSTWCLDELVEIHNRLNDWGQLVISVFYDVDPSEVRKQTGEFGDVFKKTCEDKE 131

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  AL +  +++G D      E+ ++ +IANDV  +L +   S     VG+E  
Sbjct: 132 EDQKQRWMQALVDITNIAGEDLRNGPSEAAMVVKIANDVSNKLISPSNSFGD-FVGIEAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E + S+LC+ S+    + IWG  GI K TI  A+++++   F    F  +V   +    
Sbjct: 191 LEAMNSILCLESKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKSEWE 250

Query: 220 IKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------GS 263
              L K L  ++   G +  +E  LN+   KKV IV DDV                  GS
Sbjct: 251 EIFLSKILGKDIKIGGKLGVVEQMLNQ---KKVLIVLDDVDDPEFLKTLVGETKWFGPGS 307

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
           R+I+ T+D Q+LK    +  Y +K      A K+ C+ AFG +        L  +    A
Sbjct: 308 RIIVITQDMQLLKAHDIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLA 367

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIA 383
             +PL L VLG  L  R+KE W   M +     + +I + L++SYD L    +++FL IA
Sbjct: 368 GNLPLGLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIA 427

Query: 384 CFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHP 435
           C   G           D V       KSLI +     I MH+LL  +G EI R +S    
Sbjct: 428 CLFNGFEVSYVNDLLEDNVGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKS---- 483

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE-IHMNSYAFSKMPKLRFLRFYG 494
                                 E + GI       ++E + ++  +F  M  L+ L   G
Sbjct: 484 ---------------------KETVLGIRFCTAFRSKELLPIDEKSFQGMRNLQCLSVTG 522

Query: 495 DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRL 552
           D      S +   P  ++R L+W +CPLK L  +  A+ L+ L M  +K+E+LW+    L
Sbjct: 523 DYMDLPQSLVYLPP--KLRLLDWDRCPLKCLPYSFKADYLIQLTMMGSKLEKLWEGTVPL 580

Query: 553 PS---------------------------------SLCTFKTPIT-------FEIIDCKM 572
            S                                 SL T  + I         ++  C  
Sbjct: 581 GSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTK 640

Query: 573 LERLPD--ELENLEYL-------TVKG-----TTIRELPESLGRLSWVKRLILSNNSNLE 618
           LE  P    LE+LEYL        + G       +R +P    R + + RLI+  N  LE
Sbjct: 641 LESFPTHLNLESLEYLENCIWNKNLPGLDYLACLVRCMPCEF-RPNDLVRLIVRGNQMLE 699

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
           ++ E ++ L+ L  + +S C  L  +P+L    NL  L   NC SL  +P+ + ++  ++
Sbjct: 700 KLWEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPSTIGNLQKLV 759

Query: 677 YVNL--CNFLKLDPNELS 692
            + +  C  L++ P +++
Sbjct: 760 RLEMKECTGLEVLPTDVN 777



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPE 598
           +E+LW+ VQ L S        +  ++ +C  L  +PD  +  NL  L +    ++  +P 
Sbjct: 698 LEKLWEGVQSLASL-------VEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPS 750

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
           ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P +  ++  L   N
Sbjct: 751 TIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLEN 809

Query: 659 CTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            T++E++P  + + S  +VL +  C  LK + PN
Sbjct: 810 -TAIEEVPCCIENFSWLTVLMMYCCKRLKNISPN 842


>gi|186511937|ref|NP_193424.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658421|gb|AEE83821.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1040

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 226/798 (28%), Positives = 345/798 (43%), Gaps = 139/798 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           YDVF SF G D R  F S+L      +SI TF+D  + R   I+  L+  I  + I+I+I
Sbjct: 12  YDVFPSFSGVDVRKTFLSNLLEAFDRRSINTFMDHGIERSRTIAPELISAIREARISIVI 71

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
           FS+ YASS W                      FY VDPS VRKQ+  FG  F +  +   
Sbjct: 72  FSKNYASSTWCLDELVEIHNRLNDWGQLVISVFYDVDPSEVRKQTGEFGDVFKKTCEDKE 131

Query: 101 EKMK-RWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECS 159
           E  K RW  AL +  +++G D      E+ ++ +IANDV  +L +   S     VG+E  
Sbjct: 132 EDQKQRWMQALVDITNIAGEDLRNGPSEAAMVVKIANDVSNKLISPSNSFGD-FVGIEAH 190

Query: 160 IEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGG 219
           +E + S+LC+ S+    + IWG  GI K TI  A+++++   F    F  +V   +    
Sbjct: 191 LEAMNSILCLESKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKSEWE 250

Query: 220 IKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTS----------------GS 263
              L K L  ++   G +  +E  LN+   KKV IV DDV                  GS
Sbjct: 251 EIFLSKILGKDIKIGGKLGVVEQMLNQ---KKVLIVLDDVDDPEFLKTLVGETKWFGPGS 307

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
           R+I+ T+D Q+LK    +  Y +K      A K+ C+ AFG +        L  +    A
Sbjct: 308 RIIVITQDMQLLKAHDIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLA 367

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIA 383
             +PL L VLG  L  R+KE W   M +     + +I + L++SYD L    +++FL IA
Sbjct: 368 GNLPLGLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIA 427

Query: 384 CFLEGEH--------RDEVISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHP 435
           C   G           D V       KSLI +     I MH+LL  +G EI R +S    
Sbjct: 428 CLFNGFEVSYVNDLLEDNVGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKS---- 483

Query: 436 GKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE-IHMNSYAFSKMPKLRFLRFYG 494
                                 E + GI       ++E + ++  +F  M  L+ L   G
Sbjct: 484 ---------------------KETVLGIRFCTAFRSKELLPIDEKSFQGMRNLQCLSVTG 522

Query: 495 DKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRL 552
           D      S +   P  ++R L+W +CPLK L  +  A+ L+ L M  +K+E+LW+    L
Sbjct: 523 DYMDLPQSLVYLPP--KLRLLDWDRCPLKCLPYSFKADYLIQLTMMGSKLEKLWEGTVPL 580

Query: 553 PS---------------------------------SLCTFKTPIT-------FEIIDCKM 572
            S                                 SL T  + I         ++  C  
Sbjct: 581 GSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTK 640

Query: 573 LERLPD--ELENLEY------------LTVKGTTIRELPESLGRLSWVKRLILSNNSNLE 618
           LE  P    LE+LEY            L      +R +P    R + + RLI+  N  LE
Sbjct: 641 LESFPTHLNLESLEYLENCIWNKNLPGLDYLACLVRCMPCEF-RPNDLVRLIVRGNQMLE 699

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPEL--PCNLGLLSARNCTSLEKLPAGLSSMSSVL 676
           ++ E ++ L+ L  + +S C  L  +P+L    NL  L   NC SL  +P+ + ++  ++
Sbjct: 700 KLWEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPSTIGNLQKLV 759

Query: 677 YVNL--CNFLKLDPNELS 692
            + +  C  L++ P +++
Sbjct: 760 RLEMKECTGLEVLPTDVN 777



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 542 VEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKG-TTIRELPE 598
           +E+LW+ VQ L S        +  ++ +C  L  +PD  +  NL  L +    ++  +P 
Sbjct: 698 LEKLWEGVQSLASL-------VEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPS 750

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
           ++G L  + RL +   + LE +P  + +LS L  L +S C  L+T P +  ++  L   N
Sbjct: 751 TIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLEN 809

Query: 659 CTSLEKLPAGLSSMS--SVLYVNLCNFLK-LDPN 689
            T++E++P  + + S  +VL +  C  LK + PN
Sbjct: 810 -TAIEEVPCCIENFSWLTVLMMYCCKRLKNISPN 842


>gi|224114331|ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1119

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 204/640 (31%), Positives = 319/640 (49%), Gaps = 90/640 (14%)

Query: 119 FDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLR 178
           F + + R ES+ I+ I   +  +L  T  + +K LVG++  +E +   +         + 
Sbjct: 2   FCTLLCRNESESIKIIVEYISYKLSVTLPTISKKLVGIDSRVEVLNGYIREEVGKAIFIG 61

Query: 179 IWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKD--- 234
           I G+GGI K T+A  V+++I   FEGS F  NVRE   E  G + LQ++LLSE+  +   
Sbjct: 62  ICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEILMERAS 121

Query: 235 --GNMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLK 276
              + R IE    RL  KK+ ++ DDV                  GSR+IIT+RDK+V+ 
Sbjct: 122 VWDSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVT 181

Query: 277 NCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCY 336
               N+ Y  K+L   DA  LF Q AF  DH     +EL+ + + YA G+PLAL+V+G +
Sbjct: 182 GNNNNRIYEAKKLNDDDALMLFSQKAFKNDHPTEDFVELSKQVVGYANGLPLALEVIGSF 241

Query: 337 LCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVIS 396
           L  RS   W  A+ ++  IP   I +VL++S+D L +S K +FLDIACFL+G   D +  
Sbjct: 242 LYDRSIPEWRGAINRMNEIPDGRIIDVLRVSFDGLHESDKKIFLDIACFLKGFKIDRITR 301

Query: 397 IFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWH 443
           I  +              +SLI++    ++ MH+LL+ MG+EIVR ES   PG+R+RLW 
Sbjct: 302 ILQSRGFHAGIGIPVLIERSLISVSR-DQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWT 360

Query: 444 HKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSH 503
           ++D+   L  NTG E IE I  DM  + +E   N  AFSKM +LR L+     +   +S 
Sbjct: 361 YEDVCLALMDNTGKEKIEAIFFDMPGI-KEAQWNMKAFSKMSRLRLLKI----DNVQLSE 415

Query: 504 LEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWD--------DVQRLP 553
                  ++  LEW   P K+L   +  ++LV L M  + ++QLW          V  L 
Sbjct: 416 GPENLSNKLLFLEWHSYPSKSLPAGLQVDELVELHMANSNLDQLWYGCKSAFNLKVINLS 475

Query: 554 SSLCTFKTP----------ITFE----------------------IIDCKMLERLPD--E 579
           +SL   KTP          +  E                      ++DC+ +  LP   E
Sbjct: 476 NSLHLTKTPDFTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLE 535

Query: 580 LENLEYLTVKGTT-IRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
           +E+L+   + G + + + P+ +G ++ +  L L + + +E +  SI HL  L  L +  C
Sbjct: 536 MESLKVCILDGCSKLEKFPDIVGNMNCLMVLRL-DGTGIEELSSSIHHLIGLEVLSMKTC 594

Query: 639 ERLQTLP-ELPC--NLGLLSARNCTSLEKLPAGLSSMSSV 675
           + L+++P  + C  +L  L    C+  E +P  L  + S+
Sbjct: 595 KNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESL 634



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 153/346 (44%), Gaps = 59/346 (17%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKML------ERLPD--ELENLEYLTVKGTTIRE--LPE 598
           +++ P+S+   K         CK +      +RLP    L +LE L +    +RE  LPE
Sbjct: 644 IRQPPASIFLLKNLKVLSFDGCKRIAESLTDQRLPSLSGLCSLEVLDLCACNLREGALPE 703

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARN 658
            +G LS +K L LS N N   +P SI  LS L  L +  C  L++LPE+P  +  L+   
Sbjct: 704 DIGCLSSLKSLDLSRN-NFVSLPRSINQLSGLEMLALEDCTMLESLPEVPSKVQTLNLNG 762

Query: 659 CTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEE--RGIKK---- 712
           C  L+++P      SS        F+ L+  EL     +  M  ++ E    G+      
Sbjct: 763 CIRLKEIPDPTELSSS----KRSEFICLNCWELYNHNGEDSMGLTMLERYLEGLSNPRPG 818

Query: 713 -SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKS 771
             +  PGNEIP WF HQSMGSS +++     P+      S  F A V F A         
Sbjct: 819 FGIAIPGNEIPGWFNHQSMGSSISVQV----PSW-----SMGFVACVAFSA--------- 860

Query: 772 GEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKISYVE--SDHVFLGCNSFG--GEYFGPNY 827
                +G   ++ C +K     +  S      +Y++  SDH++L   SF    E     +
Sbjct: 861 -----NGESPSLFCHFKANGRENYPSPMCISCNYIQVLSDHIWLFYLSFDHLKELKEWKH 915

Query: 828 DEFSFRIHCSFH-FPPYLERGEVKKCGI-----HFVYAQDSADHIL 867
           + +S  I  SFH F P +   +VK CG+      ++  Q S+ H +
Sbjct: 916 ESYS-NIELSFHSFQPGV---KVKNCGVCLLSSVYITPQPSSAHFI 957


>gi|297798298|ref|XP_002867033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312869|gb|EFH43292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 998

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 261/962 (27%), Positives = 405/962 (42%), Gaps = 213/962 (22%)

Query: 73  FYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKNALTEAADLSGFDSNVIRPESKLIE 132
           FY + PS++  Q H              ++++ W +AL E   L          E +L+E
Sbjct: 63  FYGISPSNLVVQEHESA-----------DRVREWSSALQELKALPAHQYREECSEWELVE 111

Query: 133 EIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAG 192
           EI  DV ++   T Q      +G+   + EIE LLC    G+ ++ IWG+ GI K T+A 
Sbjct: 112 EIVKDVCEKFFPTQQ------IGINTRVMEIEQLLCKQPWGIRRIGIWGMPGIGKTTLAK 165

Query: 193 AVFNKISRHFEGSYFALNVREAEETGGIKDLQK----KLLSELSKDGNMRNI-ESQLNRL 247
            VF++IS  +E S F  N   A    G+  L +    K+L EL ++   RNI  S L   
Sbjct: 166 TVFDQISGGYEASCFIKNFDMAFHEKGLHRLLEEHFGKILKELPRES--RNITRSSLPGE 223

Query: 248 ARKKVR--IVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYRMKEL 289
             +K+R  +V DDV +                GS +IIT+RDKQV ++   N  Y ++ L
Sbjct: 224 KLRKIRTFVVLDDVHNSLVAESFLGGFHWFGPGSLIIITSRDKQVFRHFQINHVYEVQSL 283

Query: 290 VYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAM 349
              +A +LF Q AFG    + + +EL+ + I YA G PLAL+  G  L G+     E+  
Sbjct: 284 NENEALQLFSQCAFGKHIREQNLLELSKEVIDYANGNPLALRCYGRELKGKKLSEIETTF 343

Query: 350 RKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--------- 400
            KL++    EI ++ K SY++L+D++KN+FLDIACF EGE+ D VI + +          
Sbjct: 344 LKLKLRTPNEIHDLFKSSYEALNDNEKNIFLDIACFFEGENVDYVIQLLEGCGFFPHVGI 403

Query: 401 ----SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLK---- 452
                K L+ +    R++MH +++D GREI   +++     R RLW  + I  +L+    
Sbjct: 404 GVLVEKCLMTISE-NRVKMHRIIQDFGREISNGQTVQIERCR-RLWEPRTIRFLLEDAKL 461

Query: 453 ------KNT-----GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKC-- 499
                 K T     GTE IEGI LD++  N    +   AF  M  LR+L+ +    +   
Sbjct: 462 ETYGDPKATYTHALGTEDIEGIFLDIS--NLIFDVKPGAFENMLSLRYLKIFCSSYETYF 519

Query: 500 ---MVSHLEGVPFAEVRHLEWPQCPLKTL----NICAEKLVSLKMPCTKVEQLWDDVQRL 552
              +   LE +P+ E+R L W   PL++L    + C   LV L +  +++ +LW   + L
Sbjct: 520 GLRLPKGLESLPY-ELRLLHWVNYPLQSLPQEFDPC--HLVELNLSYSQLHKLWGGTKNL 576

Query: 553 PS----SLC---------TFKTPITFEIID--------------------------CKML 573
                  LC                 E+ID                          C  +
Sbjct: 577 EMLKMVRLCHSQQLNEINDIGKAQNIELIDLQGCSKLQSFPAMGQLQHLRVVNLSGCTEI 636

Query: 574 ERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLI------------LSNNSNLERIP 621
              P+   N+E L ++GT IRELP S   LS   +L             +S+  N ER+P
Sbjct: 637 RSFPEVSPNIEELHLQGTGIRELPISTVNLSPHVKLNRELSNFLTEFPGVSDALNHERLP 696

Query: 622 E------SIRHLSKLTFLFISHCERLQT-------------------------------- 643
                  S  HL KL  L +  C  L++                                
Sbjct: 697 SVVEAVLSYHHLGKLVCLNMKDCVHLRSLPQMADLESLKVLNLSGCSELDDIQGFPRNLK 756

Query: 644 -----------LPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
                      LP+LP +L +L+A  C SL+ +P G + +      + C       + LS
Sbjct: 757 ELYIGGTAVKKLPQLPQSLEVLNAHGCVSLKAIPFGFNHLPRYYTFSGC-------SALS 809

Query: 693 EIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISF 752
             V   ++  +L +  GI +      NE   +    S+ S AT K     PAG +  +  
Sbjct: 810 PQVITKFLAKALADVEGIAREFKQELNESLAF--SFSVPSPATKKPTLNLPAGSSATMRL 867

Query: 753 AFCAVVVFPAFLKYFRHKSGEDDWDGNV-YAVCC--DWK------RKSEGHLYSWFLGK- 802
              ++     F+  F   +  DD+D  + + V C   WK      R  E   + W  G+ 
Sbjct: 868 DPSSISTLLGFV-IFIEVAISDDYDEAIGFGVRCVRRWKDKEGVSRSLEKTFHCWTPGEG 926

Query: 803 ISYVESDHVFLGCNSFGGEYFGPNYDEFSFRIHCSFHFPPYLERGE-------VKKCGIH 855
               + DH+F+ C+     + G   D   F     F F P   + +       VK CG++
Sbjct: 927 FHKFQKDHLFVFCDLNLHAFSGKGEDPDIFAGLVVFDFFPVNNQEKLLDGSCTVKSCGVY 986

Query: 856 FV 857
             
Sbjct: 987 LT 988


>gi|356506553|ref|XP_003522044.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1026

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 203/645 (31%), Positives = 324/645 (50%), Gaps = 90/645 (13%)

Query: 123 VIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGI 182
           ++  + +L++EI N VL  L       +KGLVG++  +  +ESLL   S+ VC + IWG+
Sbjct: 82  IVTNDVELLQEIINLVLMTL-RKHTVDSKGLVGIDKQVAHLESLLKQESKDVCVIGIWGV 140

Query: 183 GGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSE-LSKDGNMRN-- 239
           GG  K TIA  VF+K+   +E   F  NV+E     G+  L++KL +  L K  N++   
Sbjct: 141 GGNGKTTIAQEVFSKLYLEYESCCFLANVKEEIRRLGVISLKEKLFASILQKYVNIKTQK 200

Query: 240 -IESQLNRL-ARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWAN 281
            + S + ++  +KKV IV DDV                 SGSR+IITTRD +VL      
Sbjct: 201 GLSSSIKKMMGQKKVLIVLDDVNDSEQLEELFGTPDWYGSGSRIIITTRDIKVLIANKVP 260

Query: 282 KKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRS 341
           + Y +  L   +A +LF   AF    L+    EL+ + + YA+G+PL LK+L   LCG+ 
Sbjct: 261 EIYHVGGLSSCEAFQLFKLNAFNQGDLEMEFYELSKRVVDYAKGIPLVLKILAHLLCGKD 320

Query: 342 KEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLE-------------- 387
           KEVW+S + KL+ I    + + +K+S+D L   ++ + LD+ACF                
Sbjct: 321 KEVWKSQLEKLKGIKSNNVHDFVKLSFDDLHHEEQEILLDLACFCRRANMIENFNMKVDS 380

Query: 388 --------GEHRDEVISIFD-ASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKR 438
                   G H   V+ +     KSLI +     + M D +++M  EIV +ES N  G R
Sbjct: 381 INILLGDCGSHNAVVVGLERLKEKSLITISEDNVVSMLDTIQEMAWEIVCQES-NDLGNR 439

Query: 439 NRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNK 498
           +RLW   +IY VLK + GT+AI  I+  ++ + + + +   AF +M  L+FL F G+ + 
Sbjct: 440 SRLWDPIEIYDVLKNDKGTKAIRSITTPLSTL-KNLKLRPDAFVRMSNLQFLDF-GNNSP 497

Query: 499 CMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSL 556
            +   L+ +P  E+R+L W   PL  L     AEKLV L + C++VE+LW +V+    +L
Sbjct: 498 SLPQGLQSLP-NELRYLHWIHYPLTCLPEQFSAEKLVILDLSCSRVEKLWHEVK----NL 552

Query: 557 CTFKTPITFEIIDCKMLERLPD--ELENLEYLTVKGTT-IRELPESLGRLSWVKRLILSN 613
              K     ++  C +L  LPD  +  NL+ L V  ++ +  +  S+  L  +++L LS 
Sbjct: 553 VNLK---NVKLRWCVLLNELPDFSKSTNLKVLDVSCSSGLTSVHPSIFSLHKLEKLDLSG 609

Query: 614 NSNLERI-PESIRHLSKLTFLFISHCERLQ-----------------TLPELPCNLGLLS 655
            S+L +   +   HLS L +L +S CE L+                  +  LP + G L 
Sbjct: 610 CSSLIKFSSDDDGHLSSLLYLNLSDCEELREFSVTAENVVELDLTGILISSLPLSFGSLR 669

Query: 656 ARNC-----TSLEKLPAGLSSMSSVLYV------NLCNFLKLDPN 689
                    + +E LP  +++++ + Y+      NLC   KL P+
Sbjct: 670 KLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCILPKLPPS 714



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 21/206 (10%)

Query: 569 DCKMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLS 628
           DC+ L       EN+  L + G  I  LP S G L  ++ L L   S++E +P  I +L+
Sbjct: 634 DCEELREFSVTAENVVELDLTGILISSLPLSFGSLRKLEMLHLIR-SDIESLPTCINNLT 692

Query: 629 KLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSV----LYVNLCNFL 684
           +L +L +S C  L  LP+LP +L  L A  C SLE +    +++         V   N L
Sbjct: 693 RLRYLDLSCCSNLCILPKLPPSLETLHADECESLETVLFPSTAVEQFEENRKRVEFWNCL 752

Query: 685 KLDPNELSEIVKDGWMKHSLYEERGIK-----------KSMY-FPGNEIPKWFRHQSMGS 732
           KLD   L  I  +  +    +  + +            +++Y +PG+ +P+W  +++   
Sbjct: 753 KLDEFSLMAIELNAQINVMKFAYQHLSAPILDHVHDSYQAVYMYPGSSVPEWLAYKTRKD 812

Query: 733 SATLKTRPPRPAGYNKLISFAFCAVV 758
              +      PA     + F FC ++
Sbjct: 813 YVIIDLSSTPPAH----LGFIFCFIL 834


>gi|4588070|gb|AAD25976.1|AF093649_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1294

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 174/557 (31%), Positives = 272/557 (48%), Gaps = 74/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+H L    I TF  DD+L +G+ I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYHFLCRYKIHTFRDDDELRKGEEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + +E+  D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADEVLADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSEL----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+ E+          + D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVYEILRIDSGSVGFNNDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 359 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKL-EIIPHVEIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L + +   E+ + LKI
Sbjct: 419 PPSDYETLANDVVDTTAGLPLTLKVIGSLLFKQEIGVWEDTLEQLCKTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISI-------------FDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  G++++E   +             F   + +I +      
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNITFLIQRCMIQVGDDDEF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
            MHD LRDMGREIVR+E +  P KR+R+W  ++   +L+   G+  ++ IS+       +
Sbjct: 539 EMHDQLRDMGREIVRREDV-RPWKRSRIWSREEGIDLLRNKKGSSKVKAISITWGV---K 594

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 595 YEFKSECFLNLSELRYL 611


>gi|297809509|ref|XP_002872638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318475|gb|EFH48897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 218/815 (26%), Positives = 364/815 (44%), Gaps = 151/815 (18%)

Query: 2   YDVFLSFR-GEDTRDNFTSHLHHVLSLKSIKTFID-DQ------------LIRGDNISQS 47
           YDV + +R G+   D+F SHL   L  + I  F + D+            L+    +  +
Sbjct: 29  YDVVIRYRRGDQINDDFISHLRAALCRRGISVFNEFDEVDAVPKCRVFIILLTSTYVPSN 88

Query: 48  LLGTIEASCIAIIIFSERYASSRWFFYRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWK 107
           LL  +E            Y +    FYR+ P  +   S ++ R+F         + +RW+
Sbjct: 89  LLNILEHQ-------QTEYQAVYPIFYRLSPYDLISNSKNYERYF------LQNEPERWQ 135

Query: 108 NALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLL 167
            AL E + + G+ +   R ES+LI+EI  D LK L +        ++G++  +EEI SLL
Sbjct: 136 AALKEISQMPGY-TLTDRSESELIDEIVRDALKVLCS---GDKVNMIGMDIQVEEILSLL 191

Query: 168 CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKL 227
           CI S  V  + IWG  GI K TIA  +F +IS  +E   F  ++ +  E  G   +++  
Sbjct: 192 CIESLDVRSIGIWGTVGIGKTTIAEEIFRRISVQYETCVFLKDLHKEVEVKGHDAVREDF 251

Query: 228 LSELSKDG----NMRNIESQL--NRLARKKVRIVFDDVTS----------------GSRV 265
           LS + +       + +I++    +RL RK++ ++ DDV                  GSR+
Sbjct: 252 LSRVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVGTFLGKLNYFGPGSRI 311

Query: 266 IITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQG 325
           I+T+R+++V   C  +  Y +K L    + +L  +  F        +  L+ + +K++ G
Sbjct: 312 IMTSRNRRVFVLCKIDHVYEVKPLDIPTSVRLLDRGTFQIVLSPEVYKTLSLELVKFSNG 371

Query: 326 VPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACF 385
            P  L+ L      R++   E     ++    + I  + + S   LDD+++++FLDIACF
Sbjct: 372 NPQVLQFLSSVDRERNRLSQE-----VKTTSPIYIPGIFERSCCGLDDNERSIFLDIACF 426

Query: 386 LEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESI 432
                +D V  + D               KSL+ +     + M   ++  GREIVR+ES 
Sbjct: 427 FNRMDKDNVAMLLDGCGFSTHVGFRGLVDKSLLTISQHNFVDMLSFIQATGREIVRQESA 486

Query: 433 NHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRF 492
           + PG R+RLW+ +DI  V   +TGT AIEGI LDM+K  +    N   F KM  LR L+ 
Sbjct: 487 DRPGDRSRLWNAEDIRDVFINDTGTTAIEGIFLDMSK--QTFDANPNVFEKMCNLRLLKL 544

Query: 493 YGDK--NKCMVSHLEGVPF--AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLW 546
           Y  K   K  V   +G+ +  +++R L W   PL +L  +   E LV L +  +   +LW
Sbjct: 545 YCSKVEEKHGVYFPQGLEYLPSKLRLLHWEFYPLSSLPESFNPENLVELNLSSSCARKLW 604

Query: 547 ------------------------DDVQRLPS--------------------SLCTFKTP 562
                                     + RL S                    S+   K  
Sbjct: 605 KGKKARFLSLGNLKKMKLSYSYQLTKIPRLSSAPNLEHIDLEGCNSLLSISQSVSYLKKI 664

Query: 563 ITFEIIDCKMLERLPD--ELENLEYLTVK---------------------GTTIRELPES 599
           +   +  C  LE +P   +LE+LE L +                      GT I+E+P S
Sbjct: 665 VFLNLKGCSKLESIPSTVDLESLEVLNLSGCSKLENFPEISPNVKELYMGGTMIQEVPSS 724

Query: 600 LGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNC 659
           +  L  +++L L N+ +L+ +P SI  L  L  L +S C  L+  P+L   +  L   + 
Sbjct: 725 IKNLVLLEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDL 784

Query: 660 --TSLEKLPAGLSSMSS---VLYVNLCNFLKLDPN 689
             T++ +LP+ +S +++   + +V+  N ++L  N
Sbjct: 785 SRTAVRELPSSISYLTALEELRFVDCKNLVRLPDN 819


>gi|242276425|gb|ACS91454.1| M1-comp1 [Linum usitatissimum]
          Length = 1554

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 168/535 (31%), Positives = 265/535 (49%), Gaps = 74/535 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFID-DQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR   T  L   L    I TFID D+L +G+ I  SLL  I+ S I + 
Sbjct: 85  YEVFLSFRGPDTRYQITDILSRFLHHAKIHTFIDNDELRKGEEIKSSLLSAIDQSKIYVP 144

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I SE YA S+W                       FY VDP +VR Q+  + + F     +
Sbjct: 145 IISEGYADSKWCLMELAEIIRQKEQDPQRIILPIFYMVDPKNVRHQTGRYEKAFQEHGAK 204

Query: 99  FPEKM-KRWKNALTEAADLSGFDSNVIRPESKLIEEIANDV---LKRLDATFQSKNKGLV 154
           F EK+ + WK+AL +   + G+       +  + +++  D+   L + ++   +    LV
Sbjct: 205 FEEKIIQSWKDALAKVGQIKGWHVQSNDEQGDIADKVYADIWSHLSKENSILDTDE--LV 262

Query: 155 GVECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           G++  I+ I   L + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE 
Sbjct: 263 GIDDHIKVILEKLSLNSESVTMVGLYGMGGIGKTTTAKAVYNKISSRFDHCCFLENIRET 322

Query: 215 E-ETGGIKDLQKKLLSEL--------SKDGNMRNIESQLNRLARKKVRIVFDDVT----- 260
           + +  G+  LQ+KL+SE+        + D   R +  +  R+++ K+ IV DDV      
Sbjct: 323 QNQKDGVVVLQQKLVSEILRMDSVGFTNDSGGRKMIKE--RVSKSKILIVLDDVDEKFKF 380

Query: 261 -----------SGSRVIITTRDKQVLKNCWANK--KYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R+++VL     N+   Y +  +    + +LF + AF  + 
Sbjct: 381 EEILGCPNDFDSRSRFIITSRNQKVLSTLNENQCQLYEVGSMSEPHSLELFFKHAFKKNT 440

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLE---IIPHVEIEEVL 364
             + ++   ++ +    G+PL LKV+G  L  +  EVWE  + +L    ++   E+ E L
Sbjct: 441 PSSKYVTQANEIVSTTGGLPLTLKVIGSLLYRQQIEVWEDTLEQLHKTGMVGDDEVYERL 500

Query: 365 KISYDSLDDSQKNVFLDIACFLEGEHRDEVIS-------------IFDASKSLINLDLFY 411
           K SYD L+   K +FLDIACF     ++E                IF   + +I +    
Sbjct: 501 KRSYDKLELKAKEIFLDIACFFINTKKEEPYHMWSDCNFYPKSNIIFLIQRCMIQVGDDG 560

Query: 412 RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
             +MHD L+DMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ I +D
Sbjct: 561 VFKMHDQLKDMGREIVRREDVERPWKRSRIWSSEEGIDLLLNKKGSSQVKAIRID 615


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 234/829 (28%), Positives = 378/829 (45%), Gaps = 162/829 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLK-SIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
           Y VFLSFRG DTR NF   L+  L+ K +++ F D++ + +GD I  SL   IE S  ++
Sbjct: 176 YSVFLSFRGFDTRTNFCERLYIALNEKQNVRVFRDNEGMEKGDKIDPSLFEAIEDSAASV 235

Query: 60  IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           II S  YA+S W                      FY V+P  VRKQS  F + F    K 
Sbjct: 236 IILSTNYANSSWCLDELALLCDLRSSLKRPMIPIFYGVNPEDVRKQSGEFRKDFEEKAKS 295

Query: 99  FPEK-MKRWKNALTEAADLSGF--DSNVIRPESKLIE-EIANDV--LKRLDATFQSKNKG 152
           F E+ ++RWK A+    ++ G+   +  +  +++ I  E  +D+  L         +N+ 
Sbjct: 296 FDEETIQRWKRAMNLVGNIPGYVCTAKTVGDDNEGINREKVDDMIDLVVKKVVAAVRNRP 355

Query: 153 ------LVGVECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-G 204
                  VG+E  I+++  L     S G+  + ++G+GGI K T+A A +NKI  +F   
Sbjct: 356 EIVADYTVGLESPIKDLMKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFNRH 415

Query: 205 SYFALNVR-EAEETGGIKDLQKKLLSELSK-DGNMRNIESQLNRLAR----KKVRIVFDD 258
             F  +VR ++ +  G+ +LQK L+ EL +    + ++   L ++      KK+ +V DD
Sbjct: 416 RVFIESVRGKSSDQDGLVNLQKTLIKELFRLVPEIEDVSIGLEKIKENVHEKKIIVVLDD 475

Query: 259 VT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA 302
           V                  GS ++ITTRD ++L     N++Y +K L    A KLF  ++
Sbjct: 476 VDHIDQVNALVGETSWYGEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSFYS 535

Query: 303 FGGDHLDASHI-ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIE 361
              +      + EL+ K  +    +PLA+KV G +   + +  W+  + KL+     ++ 
Sbjct: 536 LRKEKPPTQGLLELSKKIAEVTGLLPLAVKVFGSHFYDKDENEWQVELEKLKT-QQDKLH 594

Query: 362 EVLKISYDSLDDSQKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLIN 406
            VL +S+ SLD+ +K +FLDIAC FL+ +  ++EV+ I                 KSL+ 
Sbjct: 595 GVLALSFKSLDEEEKKIFLDIACLFLKMDITKEEVVDILKGCGLNAEAALRVLIQKSLLT 654

Query: 407 LDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
           +     + MHD +RDMGR++V KES + P  R+RLW   +I  VL    GT +I GI LD
Sbjct: 655 ILTDDTLWMHDQIRDMGRQMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVLD 714

Query: 467 MNK------------------------------------------VNREIHMNSYAFSKM 484
            NK                                             EI +   +F+ M
Sbjct: 715 FNKKFARDHTADEIFSSNLRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEITIPVESFAPM 774

Query: 485 PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
            KLR L+     N  +   L+ +P +E++ ++W   PL+ L  +I + +L  L +  + V
Sbjct: 775 KKLRLLQI---NNVELEGDLKLLP-SELKWIQWKGFPLENLPPDILSRQLGVLDLSESGV 830

Query: 543 EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTV-KGTTIRELPE 598
            +    V+ LP         +   +  C  LE +PD L N   LE L + +   + ++P 
Sbjct: 831 RR----VKTLPRKRGDENLKVV-NLRGCHGLEAIPD-LSNHNALEKLVLERCNLLVKVPR 884

Query: 599 SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPC----- 649
           S+G L  + +L L   S+L      +  L  L   F+S C  L  LPE    +PC     
Sbjct: 885 SVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELL 944

Query: 650 -----------------NLGLLSARNCTSLEKLPAGLSSMSSV--LYVN 679
                             L  LS   C S+E+LP+ +  ++S+  LY++
Sbjct: 945 LDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLD 993



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 25/141 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDN-----ISQSLLGTIEASC 56
           +D FLSF+  DT  NFT  L+  L  + ++ + DD L R D+     +  SL+  IE S 
Sbjct: 17  WDAFLSFQ-RDTSHNFTDRLYEALVKEELRVWNDD-LERVDHDHDHELRPSLVEAIEDSV 74

Query: 57  IAIIIFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
             +++ S  YA+S                    FY+V+P  V++Q+  F + F    KRF
Sbjct: 75  AFVVVLSPNYANSHLRLEELAKLCDLKCLMVPIFYKVEPREVKEQNGPFEKDFEEHSKRF 134

Query: 100 -PEKMKRWKNALTEAADLSGF 119
             EK++RWK A+T   ++SGF
Sbjct: 135 GEEKIQRWKGAMTTVGNISGF 155



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 18/168 (10%)

Query: 524  TLNICAEKLVSLKMPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKMLERLPD--- 578
             L++  E + S  MPC K E L D   +  LP S+   +      ++ C+ +E LP    
Sbjct: 926  NLSVLPENIGS--MPCLK-ELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVG 982

Query: 579  ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
             L +LE L +  T +R LP S+G L  +++L L   ++L  IPE+I  L  L  LFI+  
Sbjct: 983  YLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFING- 1041

Query: 639  ERLQTLPELPCNLGL------LSARNCTSLEKLPAGLSSMSSVLYVNL 680
                 + ELP   G       LSA +C  L+++P+ +  ++S+L + L
Sbjct: 1042 ---SAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQL 1086



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 41/286 (14%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+ L +LS + +L L NN     +P S+  LS L  L +  C  L+ LP LPC L  L
Sbjct: 1251 KIPDDLEKLSCLMKLNLGNNY-FHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL 1309

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--VKDGWM-----KHSLYE 706
            +  NC SLE + + LS ++ +  +NL N  K +D   L  +  +K  +M      +SL  
Sbjct: 1310 NLANCFSLESV-SDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAV 1368

Query: 707  ERGIKKS-------MYFPGNEIPKWFRHQSMGSSATLKTRPPRPAGYNKLISFAFCAVVV 759
            ++ + K+       +  PGN +P WF         T   +P      N+ +     AVVV
Sbjct: 1369 KKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQP------NRELRGVIIAVVV 1418

Query: 760  FPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGH--LYSWFLGKISYVESDHVFLGCNS 817
                      ++ +DD+             K + H    +  L  +    +D + +   S
Sbjct: 1419 ------ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQLHICRYS 1472

Query: 818  FGGEYFGPNYDEF--SFRIHCSFHFPPYLERGEVKKCGIHFVYAQD 861
                 F P        + I      PP  +  E+K  GIH VY  D
Sbjct: 1473 ----AFHPLVTMLKDGYTIQVIKRNPPIKQGVELKMHGIHLVYEGD 1514



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         ++ +CK L+ LP    +++ L  L + G+ I ELPE  G+L  
Sbjct: 1091 IEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLEN 1150

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L ++N   L+R+P+S   L  L  L++        + ELP + G LS  N   LE L
Sbjct: 1151 LVELRMNNCKMLKRLPKSFGDLKSLHRLYMQET----LVAELPESFGNLS--NLMVLEML 1204

Query: 666  PAGLSSMS 673
               L  +S
Sbjct: 1205 KKPLFRIS 1212



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 37/204 (18%)

Query: 540  TKVEQLWDD---VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTI 593
            T +E L+ D   ++ LPSS+   K      ++ C  L  +P+   +L +L+ L + G+ +
Sbjct: 985  TSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAV 1044

Query: 594  RELP------------------------ESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
             ELP                         S+G L+ + +L L +++ +E +PE I  L  
Sbjct: 1045 EELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQL-DSTPIEALPEEIGDLHF 1103

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSV--LYVNLCNFLK 685
            +  L + +C+ L+ LP+    +  L + N   +++E+LP     + ++  L +N C  LK
Sbjct: 1104 IRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLK 1163

Query: 686  LDPNELSEI--VKDGWMKHSLYEE 707
              P    ++  +   +M+ +L  E
Sbjct: 1164 RLPKSFGDLKSLHRLYMQETLVAE 1187


>gi|356514994|ref|XP_003526186.1| PREDICTED: uncharacterized protein LOC100785853 [Glycine max]
          Length = 1079

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 180/519 (34%), Positives = 264/519 (50%), Gaps = 78/519 (15%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
            YDVFLSFRG DT   FT +L+  L  + I TFID+ L RG+ I+  ++  IE S IAII+
Sbjct: 553  YDVFLSFRGSDTLHGFTGYLYKALHDRGIHTFIDEDLKRGEEITPEIVKAIEESRIAIIV 612

Query: 62   FSERYASSRW---------------------FFYRVDPSHVRKQSH--SFGRHFSRLRKR 98
             S  YASS +                      FY VD   V   S+  +  +H   L+  
Sbjct: 613  LSINYASSSFCLDELATILDCLERKRLLVLPVFYNVDHYQVLGGSYVEALVKHGKSLKHS 672

Query: 99   FPEKMKRWKNALTEAADLSGFD-SNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVE 157
              EK+++W+ AL E ADLS F   +  R E   I EI   V  +++          VG+ 
Sbjct: 673  M-EKLEKWEMALYEVADLSDFKIKHGARYEYDFIGEIVEWVSSKINPAHYP-----VGLG 726

Query: 158  CSIEEIESLLCIG-SEGVCKLRIWGIGGISKITIAGAVFNK-ISRHFEGSYFALNVREAE 215
              + E+  LL +G  +GV  L I GI G+ K T+A  V+NK IS HF+ S F  NVRE  
Sbjct: 727  SKVLEVRKLLDVGRDDGVHMLGIHGIDGVGKSTLAREVYNKLISDHFDASCFIENVREKS 786

Query: 216  ETGGIKDLQKKLLSEL--SKDGNMRNIESQL-----NRLARKKVRIVFDDVT-------- 260
            +  G+  LQ  LLS++   KD N+ + + ++     +RL +KKV +V DDV         
Sbjct: 787  KKHGLHHLQNILLSKILGEKDINLTSAQQEISMMQRHRLQQKKVLMVLDDVDRPEQLQAV 846

Query: 261  --------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                     GS+VIITT+DKQ+L +   N+ Y +K+L   DA +L    AF   + D  +
Sbjct: 847  TGKPAWFGPGSKVIITTQDKQLLTSYDINRTYEVKKLNKDDALQLLKWKAFKMHYFDPRY 906

Query: 313  IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
              L ++A+ +A  +PL L++L  YL G+S + W+    +    P+  +E +LK+ +DSL 
Sbjct: 907  KMLLNRAVTFASSLPLTLEILASYLFGKSVKEWKFTFHQFVRSPNNPMEMILKVIFDSLK 966

Query: 373  DSQKNVFLDIACFLEGEHRDEVISIFDASKS---------LINLDLFY----------RI 413
            + +K+V LDIAC+ +G    EV  I  A            L++  L Y           I
Sbjct: 967  EKEKSVLLDIACYFKGYELTEVQDILHAHYGQCMKYYIDVLVDKSLVYITHGTEPCNDTI 1026

Query: 414  RMHDLLRDMGREIVRKES-INHPGKRNRLWHHKDIYQVL 451
             MH+L+    +EIVR ES +  PG+  RLW  +D+ +V 
Sbjct: 1027 TMHELI---AKEIVRLESMMTKPGECRRLWSWEDVREVF 1062



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 75/149 (50%), Gaps = 32/149 (21%)

Query: 3   DVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFI-DDQLIRGDNISQSLLGTIEASCIAIII 61
           DVFLSFRGEDTR +FT +L   L    I TF+ DD+L RGD I+  L   IE S   II+
Sbjct: 358 DVFLSFRGEDTRYSFTGNLCRALRDSGIHTFVDDDELQRGDEITSELEKEIEDSRFFIIV 417

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S+ YASS +                      FY+VDPS +R    SFG   +    +F 
Sbjct: 418 LSQNYASSSFCLNVLAYILECVKRKRLLVLPIFYKVDPSSIRFHGGSFGEALANHEMKFK 477

Query: 101 ----------EKMKRWKNALTEAADLSGF 119
                     EK+++WK AL E A+ SG+
Sbjct: 478 AKMDGLEHNMEKLEKWKMALHETANFSGY 506



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 54/198 (27%)

Query: 156 VECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREA 214
           +E  +EE+E  L +   G V  +RI GIGGI K T+A A                     
Sbjct: 1   MESRVEELEKCLALELVGDVRVVRISGIGGIGKTTLALAF-------------------- 40

Query: 215 EETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDVTSGSRVIITTRDKQV 274
             TGG   L  + L E                               GSR++I  +D+Q+
Sbjct: 41  --TGGTDTLLSECLGE-------------------------------GSRIVIICKDEQL 67

Query: 275 LKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLG 334
           L+       YR++ L    A +LFC+ AF  D++ + +  LT   + +AQG PLA++V+ 
Sbjct: 68  LRTHEVYHVYRVQPLNRHIAVQLFCKNAFKCDYIMSDYETLTHDVLSHAQGHPLAIEVIS 127

Query: 335 CYLCGRSKEVWESAMRKL 352
             L  R+   W   + +L
Sbjct: 128 KSLHCRNVSQWRGRLVRL 145



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 595 ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELP 648
           ++P++ G L  ++R+ LS N N E +P S++ LSKL  L + HC+RL+ LPELP
Sbjct: 191 KIPDAFGNLHCLERISLSGN-NFETLP-SLKELSKLLRLDLRHCKRLKYLPELP 242


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 234/829 (28%), Positives = 378/829 (45%), Gaps = 162/829 (19%)

Query: 2    YDVFLSFRGEDTRDNFTSHLHHVLSLK-SIKTFIDDQ-LIRGDNISQSLLGTIEASCIAI 59
            Y VFLSFRG DTR NF   L+  L+ K +++ F D++ + +GD I  SL   IE S  ++
Sbjct: 210  YSVFLSFRGFDTRTNFCERLYIALNEKQNVRVFRDNEGMEKGDKIDPSLFEAIEDSAASV 269

Query: 60   IIFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
            II S  YA+S W                      FY V+P  VRKQS  F + F    K 
Sbjct: 270  IILSTNYANSSWCLDELALLCDLRSSLKRPMIPIFYGVNPEDVRKQSGEFRKDFEEKAKS 329

Query: 99   FPEK-MKRWKNALTEAADLSGF--DSNVIRPESKLIE-EIANDV--LKRLDATFQSKNKG 152
            F E+ ++RWK A+    ++ G+   +  +  +++ I  E  +D+  L         +N+ 
Sbjct: 330  FDEETIQRWKRAMNLVGNIPGYVCTAKTVGDDNEGINREKVDDMIDLVVKKVVAAVRNRP 389

Query: 153  ------LVGVECSIEEIESLLCI-GSEGVCKLRIWGIGGISKITIAGAVFNKISRHFE-G 204
                   VG+E  I+++  L     S G+  + ++G+GGI K T+A A +NKI  +F   
Sbjct: 390  EIVADYTVGLESPIKDLMKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFNRH 449

Query: 205  SYFALNVR-EAEETGGIKDLQKKLLSELSK-DGNMRNIESQLNRLAR----KKVRIVFDD 258
              F  +VR ++ +  G+ +LQK L+ EL +    + ++   L ++      KK+ +V DD
Sbjct: 450  RVFIESVRGKSSDQDGLVNLQKTLIKELFRLVPEIEDVSIGLEKIKENVHEKKIIVVLDD 509

Query: 259  VT----------------SGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWA 302
            V                  GS ++ITTRD ++L     N++Y +K L    A KLF  ++
Sbjct: 510  VDHIDQVNALVGETSWYGEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSFYS 569

Query: 303  FGGDHLDASHI-ELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIE 361
               +      + EL+ K  +    +PLA+KV G +   + +  W+  + KL+     ++ 
Sbjct: 570  LRKEKPPTQGLLELSKKIAEVTGLLPLAVKVFGSHFYDKDENEWQVELEKLKT-QQDKLH 628

Query: 362  EVLKISYDSLDDSQKNVFLDIAC-FLEGE-HRDEVISIFDA-------------SKSLIN 406
             VL +S+ SLD+ +K +FLDIAC FL+ +  ++EV+ I                 KSL+ 
Sbjct: 629  GVLALSFKSLDEEEKKIFLDIACLFLKMDITKEEVVDILKGCGLNAEAALRVLIQKSLLT 688

Query: 407  LDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLD 466
            +     + MHD +RDMGR++V KES + P  R+RLW   +I  VL    GT +I GI LD
Sbjct: 689  ILTDDTLWMHDQIRDMGRQMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVLD 748

Query: 467  MNK------------------------------------------VNREIHMNSYAFSKM 484
             NK                                             EI +   +F+ M
Sbjct: 749  FNKKFARDHTADEIFSSNLRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEITIPVESFAPM 808

Query: 485  PKLRFLRFYGDKNKCMVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKV 542
             KLR L+     N  +   L+ +P +E++ ++W   PL+ L  +I + +L  L +  + V
Sbjct: 809  KKLRLLQI---NNVELEGDLKLLP-SELKWIQWKGFPLENLPPDILSRQLGVLDLSESGV 864

Query: 543  EQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELEN---LEYLTV-KGTTIRELPE 598
             +    V+ LP         +   +  C  LE +PD L N   LE L + +   + ++P 
Sbjct: 865  RR----VKTLPRKRGDENLKVV-NLRGCHGLEAIPD-LSNHNALEKLVLERCNLLVKVPR 918

Query: 599  SLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPE----LPC----- 649
            S+G L  + +L L   S+L      +  L  L   F+S C  L  LPE    +PC     
Sbjct: 919  SVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELL 978

Query: 650  -----------------NLGLLSARNCTSLEKLPAGLSSMSSV--LYVN 679
                              L  LS   C S+E+LP+ +  ++S+  LY++
Sbjct: 979  LDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLD 1027



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 25/141 (17%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDN-----ISQSLLGTIEASC 56
           +D FLSF+  DT  NFT  L+  L  + ++ + DD L R D+     +  SL+  IE S 
Sbjct: 51  WDAFLSFQ-RDTSHNFTDRLYEALVKEELRVWNDD-LERVDHDHDHELRPSLVEAIEDSV 108

Query: 57  IAIIIFSERYASSRW-----------------FFYRVDPSHVRKQSHSFGRHFSRLRKRF 99
             +++ S  YA+S                    FY+V+P  V++Q+  F + F    KRF
Sbjct: 109 AFVVVLSPNYANSHLRLEELAKLCDLKCLMVPIFYKVEPREVKEQNGPFEKDFEEHSKRF 168

Query: 100 -PEKMKRWKNALTEAADLSGF 119
             EK++RWK A+T   ++SGF
Sbjct: 169 GEEKIQRWKGAMTTVGNISGF 189



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 18/168 (10%)

Query: 524  TLNICAEKLVSLKMPCTKVEQLWDD--VQRLPSSLCTFKTPITFEIIDCKMLERLPD--- 578
             L++  E + S  MPC K E L D   +  LP S+   +      ++ C+ +E LP    
Sbjct: 960  NLSVLPENIGS--MPCLK-ELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVG 1016

Query: 579  ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHC 638
             L +LE L +  T +R LP S+G L  +++L L   ++L  IPE+I  L  L  LFI+  
Sbjct: 1017 YLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFING- 1075

Query: 639  ERLQTLPELPCNLGL------LSARNCTSLEKLPAGLSSMSSVLYVNL 680
                 + ELP   G       LSA +C  L+++P+ +  ++S+L + L
Sbjct: 1076 ---SAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQL 1120



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 17/155 (10%)

Query: 595  ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLL 654
            ++P+ L +LS + +L L NN     +P S+  LS L  L +  C  L+ LP LPC L  L
Sbjct: 1285 KIPDDLEKLSCLMKLNLGNNY-FHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL 1343

Query: 655  SARNCTSLEKLPAGLSSMSSVLYVNLCNFLK-LDPNELSEI--VKDGWM-----KHSLYE 706
            +  NC SLE + + LS ++ +  +NL N  K +D   L  +  +K  +M      +SL  
Sbjct: 1344 NLANCFSLESV-SDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAV 1402

Query: 707  ERGIKKS-------MYFPGNEIPKWFRHQSMGSSA 734
            ++ + K+       +  PGN +P WF    +  SA
Sbjct: 1403 KKRLSKASLKMMRNLSLPGNRVPDWFSQGPVTFSA 1437



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 549  VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTIRELPESLGRLSW 605
            ++ LP  +         ++ +CK L+ LP    +++ L  L + G+ I ELPE  G+L  
Sbjct: 1125 IEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLEN 1184

Query: 606  VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
            +  L ++N   L+R+P+S   L  L  L++        + ELP + G LS  N   LE L
Sbjct: 1185 LVELRMNNCKMLKRLPKSFGDLKSLHRLYMQET----LVAELPESFGNLS--NLMVLEML 1238

Query: 666  PAGLSSMS 673
               L  +S
Sbjct: 1239 KKPLFRIS 1246



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 37/204 (18%)

Query: 540  TKVEQLWDD---VQRLPSSLCTFKTPITFEIIDCKMLERLPD---ELENLEYLTVKGTTI 593
            T +E L+ D   ++ LPSS+   K      ++ C  L  +P+   +L +L+ L + G+ +
Sbjct: 1019 TSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAV 1078

Query: 594  RELP------------------------ESLGRLSWVKRLILSNNSNLERIPESIRHLSK 629
             ELP                         S+G L+ + +L L +++ +E +PE I  L  
Sbjct: 1079 EELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQL-DSTPIEALPEEIGDLHF 1137

Query: 630  LTFLFISHCERLQTLPELPCNLGLLSARNC--TSLEKLPAGLSSMSSV--LYVNLCNFLK 685
            +  L + +C+ L+ LP+    +  L + N   +++E+LP     + ++  L +N C  LK
Sbjct: 1138 IRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLK 1197

Query: 686  LDPNELSEI--VKDGWMKHSLYEE 707
              P    ++  +   +M+ +L  E
Sbjct: 1198 RLPKSFGDLKSLHRLYMQETLVAE 1221


>gi|449447735|ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
          Length = 1913

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/498 (32%), Positives = 271/498 (54%), Gaps = 57/498 (11%)

Query: 73   FYRVDPSHVRKQSHSFGRHFSRLRKRFP----EKMKRWKNALTEAADLSGFDSNVIRPES 128
            FY++DP  VRKQ  SF ++F+   +  P    E++K+W+ ++ +  +LSG+       E 
Sbjct: 739  FYKIDPGDVRKQEGSFEKYFNE-HEVNPNISIEEVKKWRKSMNKVGNLSGWS------EE 791

Query: 129  KLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
              I E+ N +  +L       +  LVG+   + EI  L+ IG + V  + IWG+GGI K 
Sbjct: 792  GTINEVVNHIFNKLRPDLFRYDDKLVGISRRLHEINKLMGIGLDDVRLIGIWGMGGIGKT 851

Query: 189  TIAGAVFNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSE--LSKDGNMRNIESQL-- 244
            TIA  ++  +S  F+G YF  NV+E  +  GI  LQ+KLL+   + ++ ++ N E     
Sbjct: 852  TIARIIYKSVSHLFDGCYFLDNVKETLKKEGIASLQQKLLTGALMKRNIDIPNAEGATLI 911

Query: 245  -NRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKYRMK 287
              R++  K  I+ DDV                 SGSRVI+TTR++ +L +    ++Y ++
Sbjct: 912  KRRMSNIKALIILDDVDHLSQLQQLAGGSDWFGSGSRVIVTTREEHLLISHGIKRRYNVE 971

Query: 288  ELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWES 347
             L   +  +LF Q AFG DH    + +L  + + YA G+PLA++VLG  L  +  E W  
Sbjct: 972  VLKIEEGIQLFSQKAFGEDHPKKGYFDLCSQVVDYAGGLPLAIEVLGSSLRNKPMEDWID 1031

Query: 348  AMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDA--SKSLI 405
            A++KL  +   EI E LKISY  L+   + +FLDIACF + + + + I I ++    ++ 
Sbjct: 1032 AVKKLWEVRDKEIIEKLKISYYMLEKDDREIFLDIACFFKRKSKKQAIEILESFGFPAVF 1091

Query: 406  NLDLFY----------RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNT 455
             LD+            +I+MHDL+++MG++IV ++  + P KR+RLW  +DI + L  + 
Sbjct: 1092 GLDILKEKSLITTPHEKIQMHDLIQEMGQKIVNEKFPDEPEKRSRLWLREDITRALSHDQ 1151

Query: 456  GTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLR-----------FYGDKNKCMVSHL 504
            GTEAI+GI +D+++   E H+N+ AF  M  LR L+           +  D+ + +  H 
Sbjct: 1152 GTEAIKGIMMDLDE-EGESHLNAKAFFSMTNLRILKLNNVHLSEEIEYLSDQLRFLNWHE 1210

Query: 505  EGVPFAEVRHLEWPQCPL 522
            + +P +E+  + + +CP+
Sbjct: 1211 KQIPSSEM-GMTFIRCPI 1227


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 189/584 (32%), Positives = 290/584 (49%), Gaps = 105/584 (17%)

Query: 182 IGGISKITIAGAVFNKISRHFEGSYFALNVREA-EETGGIKDLQKKLLSELSKD-----G 235
           +GGI K T+A  V+++I   FEGS F  NVRE   E  G + LQ++LLSE+  +      
Sbjct: 1   MGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEILMERASVWD 60

Query: 236 NMRNIESQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCW 279
           + R IE    RL  KK+ ++ DDV                  GSR+IIT+RDK+V+    
Sbjct: 61  SSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTGNN 120

Query: 280 ANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCG 339
            N+ Y  ++L   DA  LF Q A   DH     +EL+ + + YA G+PLAL+V+G +L  
Sbjct: 121 NNRIYEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGYANGLPLALEVIGSFLYD 180

Query: 340 RSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFD 399
           RS   W+SA+ ++  IPH +I +VL+IS+D L +S K +FLDIACFL G   D +  I +
Sbjct: 181 RSIPEWKSAINRMNEIPHGKIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILE 240

Query: 400 A-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKD 446
           +              KSLI++    ++ MH+LL+ MG+EIVR ES   PG+R+RLW ++D
Sbjct: 241 SRGFHAGIGIPILIEKSLISVSR-DQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYED 299

Query: 447 IYQVLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEG 506
           +   L  NT                     N  AFSKM KLR L+     N   +S    
Sbjct: 300 VCLALMDNTA------------------QWNMKAFSKMSKLRLLKI----NNVQLSEGPE 337

Query: 507 VPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPIT 564
               ++R LEW   P K+L   +  ++LV L M  + +EQLW             K+ + 
Sbjct: 338 DLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGC----------KSAVN 387

Query: 565 FEIIDCK---MLERLPD--ELENLEYLTVKG-TTIRELPESLGRLSWVKRLILSNNSNLE 618
            +II+      L + PD   + NLE L ++G T++ E+  SL R   ++ + L +  ++ 
Sbjct: 388 LKIINLSNSLNLIKTPDFTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIR 447

Query: 619 RIPESIRHLSKLTFLFISHCERLQTLPELPCN--------------------------LG 652
            +P ++  +  L    +  C +L+  P++  N                          LG
Sbjct: 448 ILPSNL-EMESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLG 506

Query: 653 LLSARNCTSLEKLPAGLSSMSSVLYVNL--CNFLKLDPNELSEI 694
           LLS  NC +LE +P+ +  + S+  ++L  C+ LK  P  L ++
Sbjct: 507 LLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKV 550



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 181/412 (43%), Gaps = 76/412 (18%)

Query: 488 RFLRFYGDKNKCMVSHLEGVPFAE----VRHL------EWPQC--------------PLK 523
           RF    G+ N  MV  L+G   AE    +RHL          C               LK
Sbjct: 471 RFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLK 530

Query: 524 TLNI-CAEKLVSLKMPCTKVEQLWD------DVQRLPSSLCTFKTPITFEIIDCKMLERL 576
            L++ C   L ++     KVE L +       +++LP+S+   K      +  CK +  L
Sbjct: 531 KLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLKVLSLDGCKRIVVL 590

Query: 577 PD--ELENLEYLTVKGTTIRE--LPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTF 632
           P    L +LE L ++   +RE  LPE +G LS ++ L LS N N   +P++I  LS+L  
Sbjct: 591 PSLSRLCSLEVLGLRACNLREGELPEDIGYLSSLRSLDLSQN-NFVSLPKAINQLSELEM 649

Query: 633 LFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELS 692
           L +  C  L +LPE+P  +  ++   C SL+ +P  +   SS        FL L+  EL 
Sbjct: 650 LVLEDCTMLASLPEVPSKVQTVNLNGCRSLKTIPDPIKLSSS----KRSEFLCLNCWELY 705

Query: 693 EIVKDGWMKHSLYEE--RGIKK-----SMYFPGNEIPKWFRHQSMGSSATLKTRPPRPAG 745
                  M  ++ E   +G         +  PGNEIP WF H+S GSS +++     P+G
Sbjct: 706 NHNGQESMGLTMLERYLQGFSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQV----PSG 761

Query: 746 YNKLIS-FAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDWKRKSEGHLYSWFLGKIS 804
                +  AF A    P+   +F+  +G +++      +C ++    EGHL+        
Sbjct: 762 RMGFFACVAFNANDESPSLFCHFK-ANGRENYPS---PMCINF----EGHLF-------- 805

Query: 805 YVESDHVFLGCNSFG--GEYFGPNYDEFSFRIHCSFHFPPYLERGEVKKCGI 854
              SDH++L   SF    E     ++ FS  I  SFH   Y +  +V  CG+
Sbjct: 806 ---SDHIWLFYLSFDYLKELQEWQHESFS-NIELSFH--SYEQGVKVNNCGV 851


>gi|4588056|gb|AAD25969.1|AF093642_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1581

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 174/557 (31%), Positives = 270/557 (48%), Gaps = 74/557 (13%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTF-IDDQLIRGDNISQSLLGTIEASCIAII 60
           Y+VFLSFRG DTR+ FT  L+  L    I TF  DD+L +G  I  +LL  I+ S I + 
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQFLRRYKIHTFRDDDELRKGKEIGPNLLRAIDQSKIYVP 120

Query: 61  IFSERYASSRW----------------------FFYRVDPSHVRKQSHSFGRHFSRLRKR 98
           I S  YA S+W                       FY VDPS VR Q+  + + F +   +
Sbjct: 121 IISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANK 180

Query: 99  FP-EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDA-TFQSKNKGLVGV 156
           F  + ++ WK+AL +  DL G+       +  + +E+  D+   +       +   LVG+
Sbjct: 181 FDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADEVLADIWSHISKENLILETDELVGI 240

Query: 157 ECSIEEIESLLCIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAE- 215
           +  I  +   + + SE V  + ++G+GGI K T A AV+NKIS  F+   F  N+RE + 
Sbjct: 241 DDHITAVLEKMSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQD 300

Query: 216 ETGGIKDLQKKLLSEL----------SKDGNMRNIESQLNRLARKKVRIVFDDV------ 259
           +  G+  LQKKL+SE+          + D   R +  +  R++R K+ +V DDV      
Sbjct: 301 QKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKE--RVSRFKILVVLDDVDEKFKF 358

Query: 260 ----------TSGSRVIITTRDKQVLKNCWAN--KKYRMKELVYADAHKLFCQWAFGGDH 307
                      S SR IIT+R  +VL     N  K Y +  +    + +LF + AF  + 
Sbjct: 359 EDMLGSPKDFISQSRFIITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNT 418

Query: 308 LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHV-EIEEVLKI 366
             + +  L +  +    G+PL LKV+G  L  +   VWE  + +L    ++ E+ + LKI
Sbjct: 419 PPSDYEILANDVVDTTAGLPLTLKVIGSLLFKQKIGVWEDTLEQLRKTLNLDEVYDRLKI 478

Query: 367 SYDSLDDSQKNVFLDIACFLEGEHRDEVISI-------------FDASKSLINLDLFYRI 413
           SYD+L    K +FLDIACF  GE ++E   +             F   + +I +      
Sbjct: 479 SYDALKPEAKEIFLDIACFFIGEKKEEPYYMWTDCNFYPASNITFLIQRCMIQVGNNDEF 538

Query: 414 RMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTGTEAIEGISLDMNKVNRE 473
           +MHD LRDMGREIVR+E +  P KR+R+W  ++   +L    G+  ++ IS+       +
Sbjct: 539 KMHDQLRDMGREIVRREDV-RPWKRSRIWSAEEGIDLLLNKKGSSKVKAISI---ICGAD 594

Query: 474 IHMNSYAFSKMPKLRFL 490
               S  F  + +LR+L
Sbjct: 595 YEFKSECFLNLSELRYL 611



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 570  CKMLERLPD--ELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHL 627
            C  +ER+    +L+ L  L VK  ++RE+ E L  L  ++RLIL   ++L R+P     L
Sbjct: 1052 CSGIERIASLSKLQKLTTLVVKVPSLREI-EGLAELKSLQRLILVGCTSLGRLP-----L 1105

Query: 628  SKLTFLFISHC----ERLQTLPELPCNLGLLSARNCTSLEKLPAGLS----SMSSVLYVN 679
             KL  L I  C    E +QT+  +P +L  L+ R+C  LE  P   S     M + L ++
Sbjct: 1106 EKLKELDIGGCPDLAELVQTVVAVP-SLVELTIRDCPRLEVGPMIQSLPKFPMLNKLTLS 1164

Query: 680  LCNFLKLD 687
            + N  K D
Sbjct: 1165 MVNITKED 1172


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 243/814 (29%), Positives = 365/814 (44%), Gaps = 168/814 (20%)

Query: 1   MYDVFLSF-RGED-TRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIA 58
           M +V++SF R ED  R +F SHL      + I ++I     + D +S+   G +E S   
Sbjct: 1   MVEVYISFDRCEDKVRYSFISHLSAAFHRRGISSYIGGSDPKSDGLSK---GDMEKSKAC 57

Query: 59  IIIFSERYASSRWFF---YRVDPSHVRKQSHSFGRHFSRLRKRFPEKMKRWKN------- 108
           +++FSE+Y+SS+       +V      +  H+    F R  K   +K+  WK+       
Sbjct: 58  VVVFSEKYSSSKPCLEELVKVSERRGNEGGHAVVPVFYRATKSSVKKLI-WKSSDLTSER 116

Query: 109 --ALTEAADLSGFDSNVIRPESKLIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESL 166
             AL E  DL G +S V + ES L+EEI  DV ++L+ T        +GV   +  IE+L
Sbjct: 117 RSALLEVVDLPGHESYVTQSESDLVEEIVADVREKLNTTEN------IGVYPKLLRIENL 170

Query: 167 L--CIGSEGVCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFALNVREAEETGGIKDL- 223
           L  C    GVC++ +WG+ GI K T+A A+F+++S  +E S F  +  +     G+  L 
Sbjct: 171 LQPC----GVCRIGLWGMAGIGKTTLAEAIFDQMSGGYEASCFIKDFNKKFHEKGLHCLL 226

Query: 224 ----QKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDV----------------TSGS 263
                K L  E   +  +       N L +K+V +V DDV                  GS
Sbjct: 227 EEHFGKTLREEFGVNSLITRPVLLRNVLGQKRVLVVLDDVRKALDAELFLGGFNWFCPGS 286

Query: 264 RVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYA 323
            +IIT+RDKQV   C   + Y +  L   +A +LF ++AFG D    +  +L  K I+YA
Sbjct: 287 LIIITSRDKQVFSLCQVKQIYEVPGLNEDEAQQLFSRFAFGKDIKHENLQKLLPKVIEYA 346

Query: 324 QGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIA 383
            G PLALK  G       KEV E+A   LE  P  EI + +K +YD L  ++KN+FLDI 
Sbjct: 347 DGNPLALKYYGRKTRDNPKEV-ENAFLTLEQSPPHEIYDAVKSTYDLLSSNEKNIFLDIV 405

Query: 384 CFLEGEHRDEVISIFDA-------------SKSLINLDLFYRIRMHDLLRDMGREIVRKE 430
           C   GE  D V+ + +               K L+++    ++ MH+L++D+GR+I+ + 
Sbjct: 406 CLFRGESIDYVMHLLEGCGFFPRVGINVLVEKCLVSISQ-GKVVMHNLIQDIGRKIINRR 464

Query: 431 SINHPGKRNRLWHHKDIYQVL--KKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLR 488
                 +R+RLW    I   L  K   G+E IE ISLD + +N    +N  AF KM  LR
Sbjct: 465 K-----RRSRLWKPSSIKHFLEDKNVLGSEDIEAISLDTSDLN--FDLNPMAFEKMYNLR 517

Query: 489 FLRFYGDKNKC-----MVSHLEGVPFAEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTK 541
           +L+    K        +   L+ +P  E+R L W   PL +L        LV L M  +K
Sbjct: 518 YLKICSSKPGSYSTIHLPKGLKSLP-DELRLLHWENFPLLSLPQGFDPRNLVILNMCSSK 576

Query: 542 VEQLWDDVQRLPS----SLC---------TFKTPITFEIID---CKMLER---------- 575
           +++LW+  + L       LC           +     E+ID   C  LER          
Sbjct: 577 LQRLWEGTKELEMLKRIKLCHSRKLVDIQELQNARNIEVIDLQGCTRLERFIDTGHFHHL 636

Query: 576 -------------LPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSN------ 616
                         P     +E L +K T IR +P           + LS+  N      
Sbjct: 637 RVINLSGCINIKVFPKVPPKIEELYLKQTAIRSIP----------NVTLSSKDNSFSYDH 686

Query: 617 -------LERIPESIR-HLSKLTFLFISHC---ERLQTLP--------------ELP--- 648
                  LE   ESI  +L +L  L +S C   E +Q +P              ELP   
Sbjct: 687 GGHKFLDLEDSSESIMVYLEQLKVLDLSRCIELEDIQVIPNNLKKLYLGGTSIQELPSLV 746

Query: 649 --CNLGLLSARNCTSLEKLPAGLSSMSSVLYVNL 680
               L +L   NC  L+K+P  LS+++S+  +NL
Sbjct: 747 HLSELVVLDLENCKQLQKIPLRLSTLTSLAVLNL 780



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 32/258 (12%)

Query: 571  KMLERLPDELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKL 630
            ++L  L      L  L++   ++  +PE +  L+ V  L LS N    +IPESI+ L KL
Sbjct: 888  RLLHGLVPRFYALVSLSLCNASLMHIPEEICSLATVTVLDLSRN-GFRKIPESIKQLCKL 946

Query: 631  TFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNE 690
              L + HC  L++LPELP +L +L+   C SLE +        S    N C      P  
Sbjct: 947  HSLRLRHCRNLRSLPELPQSLKILNVHGCVSLESVSWASEQFPSHYTFNNC--FNKSPEV 1004

Query: 691  LSEIVKDGWMKHSLY---EERGIKKSMYF----PGNEIPKWFRHQSMGSSATLKTRPPRP 743
              + V  G  K +      E+ + K++ F    P +       +   GS A L+      
Sbjct: 1005 ARKRVAKGLAKVASIGKEHEQELIKALAFSICAPADADQTSSYNLRTGSFAMLEL---TS 1061

Query: 744  AGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCC--DWKRKS------EGHL 795
            +  N L+ FA   VV F            +D  + +   V C   WK K       E   
Sbjct: 1062 SLRNTLLGFAIFVVVTF-----------MDDSHNNDGLGVRCISTWKSKRKVISKVEKVF 1110

Query: 796  YSWFLGKISYVESDHVFL 813
              W   +   ++ DH+F+
Sbjct: 1111 RCWGPREAPEIQRDHMFV 1128



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 549 VQRLPSSLCTFKTPITFEIIDCKMLERLP---DELENLEYLTVKGTTIRELPESLGRLSW 605
           +Q LPS L      +  ++ +CK L+++P     L +L  L + G +  E  E L     
Sbjct: 739 IQELPS-LVHLSELVVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELEDIEDLNLPRN 797

Query: 606 VKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKL 665
           ++ L L+  + ++ +P SI +LS+L  L + +C+RL+ LP    NL  L       L  +
Sbjct: 798 LEELYLAGTA-IQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSLVTLKLPRLFTV 856

Query: 666 PAGLSSMSSVLYVNLCN 682
             G+S++ S    N+C 
Sbjct: 857 ETGMSNLISAFNENVCQ 873


>gi|15242334|ref|NP_199333.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1261

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 222/832 (26%), Positives = 353/832 (42%), Gaps = 164/832 (19%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDDQLIRGDNISQSLLGTIEASCIAIII 61
           + VF++FRG + R  F SHL   L  + I  FID +   G  + ++L   I+ S IAI++
Sbjct: 19  HKVFINFRGAELRHKFISHLLKALERERINVFIDTRETMGTGL-ENLFQRIQESKIAIVV 77

Query: 62  FSERYASSRW---------------------FFYRVDPSHVRKQSHSFGRHFSRLRKRFP 100
            S RY  S+W                      FY+VD   VR  + SFG     L  R  
Sbjct: 78  ISSRYTESQWCLNELVKIKECVEAGTLVVFPVFYKVDVKIVRFLTGSFGEKLETLVLRHS 137

Query: 101 EKMKRWKNALTEAADLSGFDSNVIRPESKLIEEIAN---DVLKRLDA------------- 144
           E+ + WK AL      +G        E   +E+I     ++L+ +               
Sbjct: 138 ERYEPWKQALEFVTSKTGKRVEENSDEGAEVEQIVEHVKEILRTISGEIPRGRESESPRG 197

Query: 145 ---------TFQSKNKGLVGVECSIEEIESLLCIGSEGVCK-LRIWGIGGISKITIAGAV 194
                    T  S +  L G+E  +E+++  L + SE V + + + G+ GI K T+A  +
Sbjct: 198 EGEGEAEPKTTPSDDSLLHGIETRVEQLKEKLELKSENVTRFIGVVGMPGIGKTTLAKRL 257

Query: 195 FNKISRHFEGSYFALNVREAEETGGIKDLQKKLLSEL------SKDGNMR--NIESQLNR 246
           F++  +HF    F  +V +  E    + L   LL  L       +DGN    +I+    +
Sbjct: 258 FSECGKHFLHKMFLDDVSQKPEPFLDETLHTDLLLGLWKSKNNGRDGNRAKLSIDYIKTQ 317

Query: 247 LARKKVRIVFDDV----------------TSGSRVIITTRDKQVLKNCWANKKYRMKELV 290
           L  KKV +V D+V                 +GSR++ITT  K V++    N  Y +  L 
Sbjct: 318 LQGKKVFVVLDNVGDKSQIDKILGGCDWIKAGSRIVITTSSKSVIQGL--NSTYLVPGLS 375

Query: 291 YADAHKLFCQWAFGGDH--LDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESA 348
             DA   F   AF         S  +L  + + Y+ G P  LK+L   L  + +  W+  
Sbjct: 376 SCDALNHFNYHAFSASDGFYQPSFTDLAKQFVDYSMGHPSVLKLLARELRSKDESYWKEK 435

Query: 349 MRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIF------DASK 402
           +  L   P   I++VL+I YD L +  K VFLDIA F   E+   V  +       DAS+
Sbjct: 436 LSALANSPSNTIQDVLRIPYDELKEQHKIVFLDIAYFFRFENESYVRRLLGSSAHADASE 495

Query: 403 SLINLDLFY------RIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQVLKKNTG 456
                D F       R+ M+DLL      +  + S  +     RL  H +I  VL     
Sbjct: 496 ITDLADKFLIDISGDRVEMNDLLYTFAIGLNSQASSENTTSERRLSKHSEIVDVLMNKAE 555

Query: 457 TEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYG-------DKNKCMVSHLEGVPF 509
              + G+ LDM +V +E+ ++S  F+KM  LR+L+FY        +     ++  EG+ F
Sbjct: 556 ATKVRGVYLDMFEV-KEMGLDSDTFNKMDDLRYLKFYNSHCHRECEAEDSKLNFPEGLEF 614

Query: 510 --AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDD----------------- 548
              E+R+L W + P K L  N   + L+ LK+P +++EQ+W++                 
Sbjct: 615 LPQELRYLNWLKYPEKNLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSK 674

Query: 549 -----------------------VQRLPSSLCTFKTPITFEIIDCKMLERLPDEL----- 580
                                  ++ LP  L   ++ +   +  C  LE LPD       
Sbjct: 675 LHSLSGLSRAQKLQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDITLVGLR 734

Query: 581 -----------------ENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNLERIPES 623
                            +NLE L + GT I+ELP ++G L  +  L L +  NL  +P+S
Sbjct: 735 TLILSNCSRFKEFKLIAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDS 794

Query: 624 IRHLSKLTFLFISHCERLQTLPELPCNLGLLSA--RNCTSLEKLPAGLSSMS 673
           I +L  +  + +S C  L++ PE+  NL  L     + T+++K+P  L  +S
Sbjct: 795 IGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPDILHHLS 846



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 162/396 (40%), Gaps = 78/396 (19%)

Query: 530  EKLVSLKMPCTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLPDELENLEYLT-- 587
            +KL+SLK+   K      ++  LP S+   K      +  C  LE  P+  +NL++L   
Sbjct: 775  QKLISLKLKDCK------NLLSLPDSIGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTL 828

Query: 588  -VKGTTIRELPESLGRLSWVKRLILSNNS-----------------------NLERI-PE 622
             + GT I+++P+ L  LS  + L  S ++                       N  RI P 
Sbjct: 829  LLDGTAIKKIPDILHHLSPDQGLTSSQSNCHLCEWPRGIYGLSSVRRLSLSSNEFRILPR 888

Query: 623  SIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSM--------SS 674
            SI +L  L +L + HC+ L ++P LP NL  L A  C SLE +      +        S+
Sbjct: 889  SIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLETISILSDPLLAETEHLHST 948

Query: 675  VLYVNLCNFLKLDPNELSEIV--KDGWMKHSLYE-ERGIKKSMY----FPGNEIPKWFRH 727
             ++ N     K++ N +      K   M ++L   E+G+   +     FPG ++P WF H
Sbjct: 949  FIFTNCTKLYKVEENSIESYPRKKIQLMSNALARYEKGLALDVLIGICFPGWQVPGWFNH 1008

Query: 728  QSMGSSATLKTRPPRPAGYNKLISFAFCAVVVFPAFLKYFRHKSGEDDWDGNVYAVCCDW 787
            +++G    LK   PR      L   A CAVV F  ++              N   V C  
Sbjct: 1009 RTVG--LELKQNLPRHWNAGGLAGIALCAVVSFKDYIS-----------KNNRLLVTCSG 1055

Query: 788  KRKSEGHL---YSWFLG--------KISYVESDHVFLGCNSF-----GGEYFGPNYDEFS 831
            + K E      +S  LG        +   ++SDHVF+G  S+       +  G    E S
Sbjct: 1056 EFKKEDKTLFQFSCILGGWTEHGSYEAREIKSDHVFIGYTSWLNFMKSDDSIGCVATEAS 1115

Query: 832  FRIHCSFHFPPYLERGEVKKCGIHFVYAQDSADHIL 867
             R   +      +    V KCG   +Y+  + DH L
Sbjct: 1116 LRFQVT-DGTREVTNCTVVKCGFSLIYSHTNVDHSL 1150


>gi|357499599|ref|XP_003620088.1| Resistance protein [Medicago truncatula]
 gi|355495103|gb|AES76306.1| Resistance protein [Medicago truncatula]
          Length = 785

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/448 (36%), Positives = 240/448 (53%), Gaps = 68/448 (15%)

Query: 2   YDVFLSFRGEDTRDNFTSHLHHVLSLKSIKTFIDD-QLIRGDNISQSLLGTIEASCIAII 60
           YD FLSFRG DTR  FT +L+  L  K I+TF+DD +L  G+ I+ SL   IE S I I 
Sbjct: 20  YDAFLSFRGGDTRYGFTGNLNRALCDKGIRTFMDDRELQGGEEITSSLFKAIEESRIFIP 79

Query: 61  IFSERYASSRW---------------------FFYRVDPSHVRKQSHSFGR----HFSRL 95
           + S  YASS +                      FY V+PSHVR    S+G+    H  R 
Sbjct: 80  VLSINYASSSFCLDELVHIIHCFKESGRLVLPIFYDVEPSHVRHHKGSYGKALDDHIERF 139

Query: 96  R--KRFPEKMKRWKNALTEAADLSGFDSNVIRP----ESKLIEEIANDVLKRLDATFQSK 149
           +  K   +++++WK ALT+ A+ SG     I P    E + IE+I   V K+++      
Sbjct: 140 QNNKHSMDRLQKWKIALTQTANFSGHQ---INPRNGYEYEFIEKIVKYVSKKINCVPLYV 196

Query: 150 NKGLVGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKITIAGAVFNKISRHFEGSYFA 208
               VG+E  + ++ S L +GS G V  L I+G GG+ K T+A AV+N I+  F+G  F 
Sbjct: 197 ADYYVGLESRVLKVNSFLDVGSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFL 256

Query: 209 LNVREAEETGGIKDLQKKLLSELSKDGNMRNIESQLNRLARKKVRIVFDDV--------- 259
            ++R      G++ LQ+ LLS             +L RL RKKV ++ DDV         
Sbjct: 257 NDIRANSAKYGLEHLQENLLS-------------KLQRLHRKKVLLILDDVHELKQLQVL 303

Query: 260 -------TSGSRVIITTRDKQVLKNCWANKKYRMKELVYADAHKLFCQWAFGGDHLDASH 312
                    GS+VIITTRD+Q+L      + Y + +L   +A +L    AF  + +DA+ 
Sbjct: 304 AGGIDWFGPGSKVIITTRDEQLLVGHGIERAYEIDKLNEKEALELLRWSAFKINKVDANF 363

Query: 313 IELTDKAIKYAQGVPLALKVLGCYLCGRSKEVWESAMRKLEIIPHVEIEEVLKISYDSLD 372
             +  +A+ +A  +PLAL+V+G  L G++    +SA+ +   IP  +I+E+LK+SYD+L+
Sbjct: 364 DVILHQAVTFASVLPLALEVVGSNLFGKNMRESKSALTR---IPMKKIQEILKVSYDALE 420

Query: 373 DSQKNVFLDIACFLEGEHRDEVISIFDA 400
           D ++NVFLDI+CFL+G    EV  IF A
Sbjct: 421 DDEQNVFLDISCFLKGYDLKEVEDIFHA 448


>gi|297840111|ref|XP_002887937.1| hypothetical protein ARALYDRAFT_474976 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333778|gb|EFH64196.1| hypothetical protein ARALYDRAFT_474976 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 232/854 (27%), Positives = 375/854 (43%), Gaps = 165/854 (19%)

Query: 33  FIDDQLI-RGDNISQSLLGTIEASCIAIIIFSERYASSRW-------------------- 71
             DDQ I RG  IS  L   I  S I+I++ S+ YASS W                    
Sbjct: 1   MFDDQGIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVM 60

Query: 72  -FFYRVDPSHVRKQSHSFGRHFSRL-RKRFPEKMKRWKNALTEAADLSGFDSNVIRPESK 129
             FY VDPS VRKQ+    + F +    +  EK ++W  AL +A +++G        ESK
Sbjct: 61  TVFYGVDPSDVRKQTGDIWKVFKKTCGGKTEEKRRKWSQALNDAGNIAGEHFLNWDNESK 120

Query: 130 LIEEIANDVLKRLDATFQSKNKGLVGVECSIEEIESLLCIGSEG-VCKLRIWGIGGISKI 188
           +IE+I  DV  +L+ T     + +VG+E  +E+I+SLL + +E  V  + I G  GI K 
Sbjct: 121 MIEKIGRDVSNKLNTTVSKDFEDMVGLETHLEKIQSLLHLDNEDEVIIVGICGPAGIGKT 180

Query: 189 TIAGAVFNKISRHFEGSYFALNVREA-----EETGGIKDLQKKLLSELSKDGNMR--NIE 241
           TIA A+ ++++  F  + F  N+R +     +E G    LQ++LLS++     MR  ++ 
Sbjct: 181 TIARALHSRLTCSFRRTCFMENLRGSYNSSLDEHGLKLQLQEQLLSKILNQNGMRIYHLG 240

Query: 242 SQLNRLARKKVRIVFDDVTS----------------GSRVIITTRDKQVLKNCWANKKYR 285
           +   RL  +KV I+ D+V                  GSR+++TT ++++LK       Y 
Sbjct: 241 AIHERLCDQKVLIILDEVDDLKQLEALANDTKWFGPGSRIVVTTENQELLKQHGIKNTYH 300

Query: 286 MKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEVW 345
           +      +A ++FC++AF           L+++  K    +PL L+V+G YL  ++++ W
Sbjct: 301 VDFPTQKEAREIFCRYAFKQSTPQDGFENLSERVTKLCSRLPLGLRVMGSYLLRKTEDDW 360

Query: 346 ESAMRKLEI-IPHVE--IEEVLKISYDSLDDSQKNVFLDIACFLEGEHRDEVISIFDAS- 401
           E  + +LE     V+  IE VL++ YD L +  + +FL IA F   +  D V ++   + 
Sbjct: 361 EDILYRLESSFDPVDRGIERVLRVGYDGLHEKNQLLFLLIAFFFNYKDEDHVKAMLADNN 420

Query: 402 ------------KSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQ 449
                       KSLI       I MH LL+ +GRE V+++    P KR  L    +I  
Sbjct: 421 LNVRLGLKTLEYKSLIQKSSGGNIVMHKLLQQVGREAVQRQ---EPWKRQILIDAHEICD 477

Query: 450 VLKKNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKN--KCMVSHLEGV 507
           VL+ ++G   + GIS +++ +   +H+++ AF  M  LRFL  Y  +      V+  E +
Sbjct: 478 VLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRNLRFLSIYETRRDINLRVNVPENM 537

Query: 508 PFA-EVRHLEWPQCPLKTL---------------NICAEKLVSLKMPCTKVEQL------ 545
            F   +R L W   P K L               N   EKL     P T + +L      
Sbjct: 538 NFPHRLRFLHWEVYPGKCLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSL 597

Query: 546 ----------------------WDDVQRLPSS-------------LC----------TFK 560
                                 W  V+ +PSS             LC             
Sbjct: 598 RLKELPDLSNATNLKRLDLTGCWSLVE-IPSSVENLHKLEELEMNLCLQLQVVPTHFNLA 656

Query: 561 TPITFEIIDCKMLERLPDELENLEYLTVKGTTIRELPESLGRLS---------------- 604
           + I+  ++ C  L + P    N+  L +    + E+ ES+   S                
Sbjct: 657 SLISLRMLGCWQLRKFPGISTNITSLVIGDAMLEEMLESITLWSCLETLSIYGSVITHNF 716

Query: 605 WVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEK 664
           W   LI    +++ERIP  I+ L  L  L+I  C +L +LPELP +L  L+   C SLE 
Sbjct: 717 WAVTLIEKMGTDIERIPYCIKDLPALKSLYIGGCPKLVSLPELPGSLRRLTVETCESLET 776

Query: 665 LPAGLSSMSSVLYVNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKW 724
           +   +   S ++  +  N  +L           G     +  ++  +   Y PG E+P  
Sbjct: 777 VSFPID--SPIVSFSFPNCFEL-----------GVEARRVITQKAGQMLAYLPGREVPAE 823

Query: 725 FRHQSMGSSATLKT 738
           F H+++G S T+++
Sbjct: 824 FVHRAIGDSLTIRS 837


>gi|227438189|gb|ACP30584.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 980

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 195/656 (29%), Positives = 324/656 (49%), Gaps = 101/656 (15%)

Query: 130 LIEEIANDVLKRLDATFQSKN-KGLVGVECSIEEIESLLCIGSEGVCKLRIWGIGGISKI 188
           +I++IA D+   L+    S +  GLVG+   ++++E LLC+GS+ V  + IWG  GI K 
Sbjct: 1   MIKKIATDISNMLNNFTPSTDFDGLVGMGAHLKKMEPLLCLGSDEVRMIGIWGPPGIGKT 60

Query: 189 TIAGAVFNKISRHFEGSYFALNV-----REAEETGGIK-DLQKKLLSELS--KDGNMRNI 240
           TIA   +N++S  F+ S F  ++     R   +   +K  LQ++ +S+++  KD  + ++
Sbjct: 61  TIARVAYNQLSNSFQLSVFMDDIKANSSRLCSDDYSVKLQLQQQFMSQITDHKDMVVSHL 120

Query: 241 ESQLNRLARKKVRIVFDDVT----------------SGSRVIITTRDKQVLKNCWANKKY 284
               NRL  KKV +V D V                  GSR+IITT+D+++L+    N  Y
Sbjct: 121 GVASNRLKDKKVLVVLDGVDRSIQLDAMAKETWWFGPGSRIIITTQDQKLLRAHGINHIY 180

Query: 285 RMKELVYADAHKLFCQWAFGGDHLDASHIELTDKAIKYAQGVPLALKVLGCYLCGRSKEV 344
            +      +A ++FC  +FG         EL  +  + +  +PL L+V+G Y  G SK+ 
Sbjct: 181 EVDFPTNDEALQIFCMHSFGQKSPKYGFEELAREVTQLSGELPLGLRVMGSYFRGMSKQE 240

Query: 345 WESAMRKLEIIPHVEIEEVLKISYDSLDDSQKNVFLDIACFLEGE--HRDEV-------- 394
           W + + +L    + +I  +LK SYD+LDD  K +FL IACF   E  H+ EV        
Sbjct: 241 WINVLPRLRTSLYADIRSILKFSYDALDDEDKYLFLHIACFFSYEEIHKVEVYLAKKFVE 300

Query: 395 ----ISIFDASKSLINLDLFYRIRMHDLLRDMGREIVRKESINHPGKRNRLWHHKDIYQV 450
               +++  A +SLI++D +  IRMH LL  +GREIV K+SI+ PG+R  L+  ++I ++
Sbjct: 301 VRQRLNVL-AERSLISID-WGVIRMHSLLEKLGREIVCKQSIHDPGQRQFLYDCREICEL 358

Query: 451 LK-KNTGTEAIEGISLDMNKVNREIHMNSYAFSKMPKLRFLRFYGDKNKCMVSHLEGVPF 509
           L  + TG++++ GI LD  K+  E+ ++  AF  M  L+FL+  G      ++       
Sbjct: 359 LTGEATGSKSVIGIKLDYYKIEEELDVSEKAFDGMSNLQFLQVNGYGAPLQLTRGLNYLS 418

Query: 510 AEVRHLEWPQCPLKTL--NICAEKLVSLKMPCTKVEQLWDDVQRLPS------------- 554
            ++R L W   P+     N+  E LV L M  +K+E+LW+ ++ L S             
Sbjct: 419 HKLRLLHWSHFPMSCFPCNVNLEFLVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNLK 478

Query: 555 SLCTFKTPITFEII---DCKMLERLP----DELENL---------EYLTVKGTTIR---- 594
            L    T    E +   +C  L +LP    + +E L         ++ +  G  +     
Sbjct: 479 ELPNLSTATNLEKLYLRNCWSLIKLPCLPGNSMEELDIGGCSSLVQFPSFTGNAVNLLKL 538

Query: 595 ---------ELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLP 645
                    ELP  +G  + ++ L LSN S+L  +P S  +L KL  L +  C +L+  P
Sbjct: 539 NLVSFPNLVELPSYVGNATNLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFP 598

Query: 646 ELPCNLGL-----LSARNCTSLEKLPAGLSSMSSVLYVNLCNFLKLDPNELSEIVK 696
               N+ L     L    C+SL+     LS  S++  VN+ N   L+ + L ++++
Sbjct: 599 N---NITLEFLNDLDLAGCSSLD-----LSGFSTI--VNVVNLQTLNLSSLPQLLE 644



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 63/325 (19%)

Query: 460 IEGISLDMNKVNREIHMNSYAFSKMPKL-RFLRFYGDKNKCMVSHLEGVPFAEVRHLEWP 518
           + G S  +N VN    + +   S +P+L     F G+      ++LE +  +   +L   
Sbjct: 619 LSGFSTIVNVVN----LQTLNLSSLPQLLEVPSFIGN-----ATNLEDLILSNCSNLV-- 667

Query: 519 QCPLKTLNICAEKLVSLKMP-CTKVEQLWDDVQRLPSSLCTFKTPITFEIIDCKMLERLP 577
           + PL   N+  +KL  L++  C+K+E L  ++          ++     + DC ML+  P
Sbjct: 668 ELPLFIGNL--QKLKRLRLEGCSKLEVLPTNIN--------LESLFELNLNDCSMLKHFP 717

Query: 578 DELENLEYLTVKGTTIRELPESLGRLSWVKRLILSNNSNL-------ERI---------- 620
           +    +  L + GT I ++P S+   S +  L +S   NL       ERI          
Sbjct: 718 EISTYIRNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKGFPHALERITCMCLTDTEI 777

Query: 621 ---PESIRHLSKLTFLFISHCERLQTLPELPCNLGLLSARNCTSLEKLPAGLSSMSSVLY 677
              P  ++ +S+L+   +  C +L TLP +  ++  + A +C SLE L    S  +  L 
Sbjct: 778 QELPPWVKKISRLSVFVLKGCRKLVTLPAISESIRYMDASDCKSLEILEC--SFHNQYLT 835

Query: 678 VNLCNFLKLDPNELSEIVKDGWMKHSLYEERGIKKSMYFPGNEIPKWFRHQSMGSSA-TL 736
           +N  N  KL     + I+++              +    PG ++P  F H++ G+   T+
Sbjct: 836 LNFANCFKLSQEARNLIIQNSC------------RYAVLPGGQVPPHFTHRATGAGPLTI 883

Query: 737 K-TRPPRPAGYNKLISFAFCAVVVF 760
           K    P P    K + F  C ++V+
Sbjct: 884 KLNEKPLP----KYMIFKACILLVY 904



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 21/198 (10%)

Query: 487 LRFLRFYGDKNKCMVSHLEGVP-FAEVRHLEWPQCPLKTLNIC-AEKLVSLKMPCTKVEQ 544
           ++F  F G+    +  +L   P   E+         L+ LN+     LV L +    +++
Sbjct: 523 VQFPSFTGNAVNLLKLNLVSFPNLVELPSYVGNATNLENLNLSNCSHLVELPLSFGNLQK 582

Query: 545 LWDDVQRLPSSLCTFKTPITFEIID------CKMLE----RLPDELENLEYLTVKG-TTI 593
           L   + +  S L  F   IT E ++      C  L+         + NL+ L +     +
Sbjct: 583 LQTLILKGCSKLENFPNNITLEFLNDLDLAGCSSLDLSGFSTIVNVVNLQTLNLSSLPQL 642

Query: 594 RELPESLGRLSWVKRLILSNNSNLERIPESIRHLSKLTFLFISHCERLQTLPELPCNLGL 653
            E+P  +G  + ++ LILSN SNL  +P  I +L KL  L +  C +L+ LP    N+ L
Sbjct: 643 LEVPSFIGNATNLEDLILSNCSNLVELPLFIGNLQKLKRLRLEGCSKLEVLPT---NINL 699

Query: 654 -----LSARNCTSLEKLP 666
                L+  +C+ L+  P
Sbjct: 700 ESLFELNLNDCSMLKHFP 717


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.138    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,663,647,811
Number of Sequences: 23463169
Number of extensions: 581579790
Number of successful extensions: 1429242
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5194
Number of HSP's successfully gapped in prelim test: 10755
Number of HSP's that attempted gapping in prelim test: 1342052
Number of HSP's gapped (non-prelim): 56044
length of query: 869
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 717
effective length of database: 8,792,793,679
effective search space: 6304433067843
effective search space used: 6304433067843
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)