Query 040256
Match_columns 228
No_of_seqs 151 out of 1029
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 10:17:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 100.0 1.5E-67 5.1E-72 453.1 21.7 213 2-228 16-244 (245)
2 1n10_A PHL P I, pollen allerge 100.0 1.2E-66 4.1E-71 446.2 24.0 210 2-225 16-241 (241)
3 3d30_A YOAJ, expansin like pro 100.0 3.2E-55 1.1E-59 368.9 23.1 193 3-228 4-206 (208)
4 1wc2_A Endoglucanase; hydrolas 100.0 2.7E-34 9.1E-39 232.3 7.2 125 3-136 12-163 (181)
5 3ft1_A PHL P 3 allergen; beta- 100.0 1.6E-30 5.5E-35 193.9 12.3 93 134-228 2-99 (100)
6 2jnz_A PHL P 3 allergen; timot 100.0 4.1E-28 1.4E-32 182.8 12.1 90 135-226 14-108 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 1.1E-27 3.8E-32 177.5 -1.5 89 135-226 3-96 (96)
8 1bw3_A Barwin, basic barley SE 99.7 1.6E-17 5.5E-22 127.6 4.9 62 49-131 58-124 (125)
9 4avr_A PA4485; unknown functio 99.3 3.9E-11 1.3E-15 87.9 11.0 92 6-128 2-94 (95)
10 2kqa_A Cerato-platanin; elicit 98.2 3.4E-06 1.2E-10 64.6 7.2 67 39-129 51-120 (129)
11 3m3g_A EPL1 protein; fungal, p 98.1 4.3E-06 1.5E-10 63.5 5.8 66 39-129 45-114 (120)
12 3suj_A Cerato-platanin 1; doub 98.0 4.9E-06 1.7E-10 63.8 4.9 71 39-129 45-119 (127)
13 3suk_A Cerato-platanin-like pr 98.0 4.7E-06 1.6E-10 63.7 4.8 70 39-129 46-119 (125)
14 3sul_A Cerato-platanin-like pr 98.0 1.2E-05 4E-10 61.3 6.0 67 40-129 46-116 (122)
15 3sum_A Cerato-platanin-like pr 98.0 2.3E-05 7.8E-10 60.4 7.4 65 39-129 49-121 (136)
16 2eng_A Endoglucanase V; cellul 95.2 0.0085 2.9E-07 49.2 2.4 53 40-107 72-124 (210)
17 3nrl_A Uncharacterized protein 66.1 3.2 0.00011 28.8 2.1 19 44-62 23-41 (81)
18 2c9r_A COPC, copper resistance 37.8 18 0.00063 25.8 2.3 27 115-141 73-102 (102)
19 3pe9_A Fibronectin(III)-like m 36.7 97 0.0033 21.8 6.1 46 157-205 29-76 (98)
20 1lyq_A PCOC copper resistance 36.6 20 0.00067 25.7 2.3 27 115-141 75-104 (104)
21 1v8h_A Sulfur oxidation protei 27.2 1.1E+02 0.0039 21.8 5.2 34 175-209 68-101 (107)
22 2kct_A Cytochrome C-type bioge 27.2 64 0.0022 22.8 3.7 28 193-220 30-61 (94)
23 1ogp_A Sulfite oxidase; oxidor 23.7 1E+02 0.0035 27.3 5.2 24 153-176 291-315 (393)
24 2a9d_A Sulfite oxidase; molybd 23.5 1.2E+02 0.0041 26.6 5.6 52 153-204 278-343 (372)
25 2blf_A SORA, sulfite\:cytochro 22.0 91 0.0031 27.4 4.5 50 155-204 289-347 (373)
26 1sr3_A APO-CCME; OB fold, beta 21.2 86 0.003 23.7 3.6 28 193-220 50-78 (136)
27 1sox_A Sulfite oxidase; oxidor 20.1 1.5E+02 0.0051 26.9 5.6 52 153-204 372-437 (466)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=1.5e-67 Score=453.08 Aligned_cols=213 Identities=31% Similarity=0.629 Sum_probs=197.7
Q ss_pred CCCceeeEEEEecCCCCCCC--CccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEE
Q 040256 2 NGAWEDAHATFYGDMSGGET--MQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKIT 79 (228)
Q Consensus 2 ~~~w~~g~aT~Yg~~~~~g~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~ 79 (228)
+++|+.|+||||++++++|+ ++|||||++++..+++.++||+|+++|++|++||+||||+|.+ +..|++ + +|+|+
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~-~~~C~~-~-sv~V~ 92 (245)
T 2hcz_X 16 NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE-KPECSG-N-PVTVY 92 (245)
T ss_dssp CCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS-SSSBCS-S-CEEEE
T ss_pred CCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC-CCccCC-C-CEEEE
Confidence 36899999999999988887 7999999998888899999999999999999999999999985 446984 4 79999
Q ss_pred EecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-------CCCCeeeEEEEEEEeccCC--ceEEEEc--CCCceEE
Q 040256 80 ATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-------SKAGIIPVRYRRILCSKQG--GVKFEVK--GNPNWTL 148 (228)
Q Consensus 80 V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-------~~~G~v~v~~~~V~C~~~g--~i~~~v~--s~~~w~a 148 (228)
|||+|| |+++++|||||+.||.+||. ++.|+|+|+||||+|+++| +|+|+|+ |++||++
T Consensus 93 VtD~C~----------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~a 162 (245)
T 2hcz_X 93 ITDMNY----------EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLA 162 (245)
T ss_dssp EEEECC----------CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCCC
T ss_pred EEeccC----------CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceEE
Confidence 999998 65557999999999999999 7899999999999999984 6999999 7999999
Q ss_pred EEEEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCC--CCCccEEEEEEecCCcEEEEccccCCCCCCCeEEecc
Q 040256 149 VLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTV--LLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225 (228)
Q Consensus 149 v~v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~y~~~ 225 (228)
|+|+|++|+++|++|||++++ +.|++|+|+|||+|++++. |.+ ||+||||+.+|++|+++||||++|++|++|+++
T Consensus 163 vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~~ 241 (245)
T 2hcz_X 163 VLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTSN 241 (245)
T ss_dssp EEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEECS
T ss_pred EEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEeCc
Confidence 999999999999999999987 4899999999999999874 667 999999999999999999999999999999999
Q ss_pred cCC
Q 040256 226 GNF 228 (228)
Q Consensus 226 vqf 228 (228)
+||
T Consensus 242 ~qf 244 (245)
T 2hcz_X 242 VQF 244 (245)
T ss_dssp CCC
T ss_pred ccc
Confidence 998
No 2
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=1.2e-66 Score=446.24 Aligned_cols=210 Identities=32% Similarity=0.654 Sum_probs=187.3
Q ss_pred CCCceeeEEEEecCCCCCCC--CccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEE
Q 040256 2 NGAWEDAHATFYGDMSGGET--MQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKIT 79 (228)
Q Consensus 2 ~~~w~~g~aT~Yg~~~~~g~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~ 79 (228)
+++|+.|+||||++++++|+ ++|||||++++..+++.++||+|+++|++|++||+||||+|.++ ..|++ + +|+|+
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~-~~C~~-~-~v~V~ 92 (241)
T 1n10_A 16 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKP-EACSG-E-PVVVH 92 (241)
T ss_dssp CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSS-TTBCS-C-CEEEE
T ss_pred cCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCC-CccCC-C-CEEEE
Confidence 46899999999999988787 89999999988889999999999999999999999999999854 46985 3 79999
Q ss_pred EecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-------CCCCeeeEEEEEEEeccCC--ceEEEEc--CCCceEE
Q 040256 80 ATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-------SKAGIIPVRYRRILCSKQG--GVKFEVK--GNPNWTL 148 (228)
Q Consensus 80 V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-------~~~G~v~v~~~~V~C~~~g--~i~~~v~--s~~~w~a 148 (228)
|||+|+ |++++.|||||+.||.+||. ++.|+|+|+||||+|+++| +|+|+|+ |++||++
T Consensus 93 VtD~C~----------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~~ 162 (241)
T 1n10_A 93 ITDDNE----------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLA 162 (241)
T ss_dssp EEEECS----------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEEE
T ss_pred EeEecC----------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceEE
Confidence 999996 86668999999999999999 6899999999999999984 7999999 7999999
Q ss_pred EEEEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCC--CCCccEEEEEEecCCcEEEEccccCCCCCCCeEEecc
Q 040256 149 VLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTV--LLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225 (228)
Q Consensus 149 v~v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~y~~~ 225 (228)
|+|+|++|.++|++|||++++ +.|++|+|+|||+|++++. |.+ ||+||||+.+|++|+++||||++|++|+||+++
T Consensus 163 vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~~ 241 (241)
T 1n10_A 163 LLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK 241 (241)
T ss_dssp EEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEEC-
T ss_pred EEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEeCC
Confidence 999999999999999999987 5899999999999999874 667 999999999999999999999999999999974
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=3.2e-55 Score=368.89 Aligned_cols=193 Identities=21% Similarity=0.297 Sum_probs=174.2
Q ss_pred CCceeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCC----CCCCceEEEEEeCCCccccCCCceEEE
Q 040256 3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNG----STCGACFEIICVNDPQWCLKGAGSIKI 78 (228)
Q Consensus 3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~~v~c~~~~~~C~~g~~sv~v 78 (228)
++.+.|+||||+... .+||||+.. .+++.++||+|+.+|++| +.||+||||+|. ++ +|+|
T Consensus 4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~--------~g-sv~V 67 (208)
T 3d30_A 4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP--------KG-KTTV 67 (208)
T ss_dssp TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET--------TE-EEEE
T ss_pred CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC--------CC-cEEE
Confidence 356899999999753 489999864 356789999999999987 899999999983 23 7999
Q ss_pred EEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEeccCCceEEEEc--CCCceEEEEEEeeCC
Q 040256 79 TATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVK--GNPNWTLVLVYNVGG 156 (228)
Q Consensus 79 ~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~i~~~v~--s~~~w~av~v~n~~G 156 (228)
+|+|+||+ |. ..|||||+.||.+||.++.|+++|+||+|+|+++|+|+|+++ |++||++|+|+|++
T Consensus 68 ~v~D~CP~---------C~--~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~- 135 (208)
T 3d30_A 68 YVTDLYPE---------GA--RGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHK- 135 (208)
T ss_dssp EEEEECTT---------CC--TTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCS-
T ss_pred EEEECCCC---------CC--CCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecC-
Confidence 99999996 95 589999999999999999999999999999999999999999 89999999999999
Q ss_pred CcceEEEEEEcCCCceEEcCCCCCCeEEeCCCCCCccEEEEEEecCCcEEEEccccCCCCCC----CeEEecccCC
Q 040256 157 AGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQF----GQTFQGRGNF 228 (228)
Q Consensus 157 ~~~I~~Vev~~~~~~w~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~----g~~y~~~vqf 228 (228)
++|++|||+++ +.|++|+|+|+|+|..+. +.++||+||||+.+|++| .+|||++|++ +.+|++++||
T Consensus 136 -g~v~~v~i~~~-~~W~~m~r~~~n~~~~~~-~~~~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf 206 (208)
T 3d30_A 136 -YPVMKMEYEKD-GKWINMEKMDYNHFVSTN-LGTGSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF 206 (208)
T ss_dssp -SCEEEEEEEET-TEEEEEEECTTSCEEEEC-CCSSSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred -CCEEEEEEecC-CcEEEccccccceeecCC-CCCCCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence 59999999987 589999999999887765 445599999999999999 7999999997 8999999998
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=100.00 E-value=2.7e-34 Score=232.30 Aligned_cols=125 Identities=26% Similarity=0.405 Sum_probs=106.0
Q ss_pred CCceeeEEEEecCCCCCCCCccccCCC-----CCCCCCCCCeEEEcChhccCCC------CCCCceEEEEEeCCC-----
Q 040256 3 GAWEDAHATFYGDMSGGETMQGACGYG-----DLKRQGYGLETAALSTALFNNG------STCGACFEIICVNDP----- 66 (228)
Q Consensus 3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~~v~c~~~~----- 66 (228)
.+|+.++||||++. ++|||||+ ++++++|+.++||||++||++| ++||+||||+|++++
T Consensus 12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg 86 (181)
T 1wc2_A 12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (181)
T ss_dssp TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence 36999999999975 58999999 6677788999999999999997 899999999998544
Q ss_pred ccccCCCceEEEEEecCCCCCCCCCCCcCCCCC-----------CCceeechhHHhhccCCCCCeeeEEEEEEEeccCCc
Q 040256 67 QWCLKGAGSIKITATNFCPPNYTKTKDIWCNPP-----------QKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGG 135 (228)
Q Consensus 67 ~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~-----------~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~ 135 (228)
.+|.+|+ +|+|+|||+||.+. .+..||.++ +.||||+..| .+||....|+++|+||||+|+..++
T Consensus 87 ~~~~~g~-SI~VtaTN~CPpn~--~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~~ 162 (181)
T 1wc2_A 87 GPVREGL-SKTFMITNLCPNIY--PNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEHN 162 (181)
T ss_dssp CCCCTTC-EEEEEEEEEECSST--TSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHHH
T ss_pred ccCCCCC-eEEEEEecCCCCCC--CCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCCC
Confidence 3455666 89999999999642 345699753 6899999999 8999989999999999999987544
Q ss_pred e
Q 040256 136 V 136 (228)
Q Consensus 136 i 136 (228)
+
T Consensus 163 ~ 163 (181)
T 1wc2_A 163 H 163 (181)
T ss_dssp H
T ss_pred c
Confidence 3
No 5
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.97 E-value=1.6e-30 Score=193.90 Aligned_cols=93 Identities=20% Similarity=0.474 Sum_probs=88.2
Q ss_pred CceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcCCC-ceEEcCCCCCCeEEeCC--CCCCccEEEEEEecCCcEEEE
Q 040256 134 GGVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSST-GWLPMSRNWGQNWQTGT--VLLGQGLSFQVTTSDGKTLQF 208 (228)
Q Consensus 134 g~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~~~-~w~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~ 208 (228)
.+|+|+|+ |++||++|+|.|++|+++|.+||||++++ .|++|+| ||++|++++ +|++ ||+||||+.+|+++++
T Consensus 2 ~~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 2 VQVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVF 79 (100)
T ss_dssp BEEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEE
T ss_pred CCEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEE
Confidence 36999999 79999999999999999999999999885 7999999 999999986 6778 9999999999999999
Q ss_pred ccccCCCCCCCeEEecccCC
Q 040256 209 DNVAPRNWQFGQTFQGRGNF 228 (228)
Q Consensus 209 ~~vip~~w~~g~~y~~~vqf 228 (228)
+||||++|++|+||+++|||
T Consensus 80 ~nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 80 DEVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEEECTTCCTTCEECCCCBC
T ss_pred CeEeCCCCCCCcEEeccccc
Confidence 99999999999999999997
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.95 E-value=4.1e-28 Score=182.82 Aligned_cols=90 Identities=22% Similarity=0.532 Sum_probs=84.5
Q ss_pred ceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEc-CCCceEEcCCCCCCeEEeCC--CCCCccEEEEEEecCCcEEEEc
Q 040256 135 GVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKG-SSTGWLPMSRNWGQNWQTGT--VLLGQGLSFQVTTSDGKTLQFD 209 (228)
Q Consensus 135 ~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~-~~~~w~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~ 209 (228)
+|.|+|+ |++||++|+|.|++|+++|.+||||+ +.+.|++|+|+ |++|++++ +|.+ ||+||||+.+|++++++
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~ 91 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 91 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 7999998 89999999999999999999999997 44689999999 99999986 6788 99999999999999999
Q ss_pred cccCCCCCCCeEEeccc
Q 040256 210 NVAPRNWQFGQTFQGRG 226 (228)
Q Consensus 210 ~vip~~w~~g~~y~~~v 226 (228)
||||++|+||+||++.+
T Consensus 92 nViPa~W~~Gqty~s~v 108 (108)
T 2jnz_A 92 EVIPTAFSIGKTYKPEE 108 (108)
T ss_dssp EEECSSCCTTCEECCCC
T ss_pred eEECCCCCCCCEEeCCC
Confidence 99999999999999875
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.92 E-value=1.1e-27 Score=177.48 Aligned_cols=89 Identities=28% Similarity=0.526 Sum_probs=82.0
Q ss_pred ceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcC-CCceEEcCCCCCCeEEeCC--CCCCccEEEEEEecCCcEEEEc
Q 040256 135 GVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGS-STGWLPMSRNWGQNWQTGT--VLLGQGLSFQVTTSDGKTLQFD 209 (228)
Q Consensus 135 ~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~-~~~w~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~ 209 (228)
+|+|+|+ |++||++|+|.|++ ++|.+||||++ .+.|++|+|+||++|++++ +|+| ||+||||+.+|++++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence 6899999 89999999999998 99999999995 4689999999999999987 5778 99999999999999999
Q ss_pred cccCCCCCCCeEEeccc
Q 040256 210 NVAPRNWQFGQTFQGRG 226 (228)
Q Consensus 210 ~vip~~w~~g~~y~~~v 226 (228)
||||++|++|+||++++
T Consensus 80 nViP~~W~~G~ty~~~~ 96 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPEE 96 (96)
T ss_dssp SCSCSSCCSSSCCCC--
T ss_pred eEeCCCCCCCCEEeCCC
Confidence 99999999999999864
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.68 E-value=1.6e-17 Score=127.64 Aligned_cols=62 Identities=24% Similarity=0.532 Sum_probs=54.8
Q ss_pred CCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeec-hhHHhhccC----CCCCeeeE
Q 040256 49 NNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLS-MPMFVKLAP----SKAGIIPV 123 (228)
Q Consensus 49 ~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs-~~aF~~la~----~~~G~v~v 123 (228)
++++.||+|++|++.. +|+ +|+|+|+|+||. | +|||| ++||++|+. +..|+++|
T Consensus 58 ~~g~~CG~cv~Vtn~~------nGk-sV~V~VvD~CP~---------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V 116 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPA------TGA-QITARIVDQCAN---------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV 116 (125)
T ss_dssp CSGGGTTCEEEEEETT------TTE-EEEEEEEECCSS---------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred CCCcccCCEEEeEeCC------CCC-EEEEEEEEeCCC---------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence 6789999999999752 254 999999999995 3 49999 999999998 67899999
Q ss_pred EEEEEEec
Q 040256 124 RYRRILCS 131 (228)
Q Consensus 124 ~~~~V~C~ 131 (228)
+|++|+|+
T Consensus 117 ~w~~V~C~ 124 (125)
T 1bw3_A 117 NYQFVDCR 124 (125)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999996
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.28 E-value=3.9e-11 Score=87.92 Aligned_cols=92 Identities=23% Similarity=0.304 Sum_probs=72.5
Q ss_pred eeeEEEEecCC-CCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCC
Q 040256 6 EDAHATFYGDM-SGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFC 84 (228)
Q Consensus 6 ~~g~aT~Yg~~-~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~C 84 (228)
..|.|+|||.. .+ ...|||=-.. ...++||-.+ ..||...+|+... +|+ +|+|+|.|+|
T Consensus 2 ~~G~ASwYg~~f~G---~~TA~Ge~~~----~~~~tAAH~t------lP~gt~vrVtNl~------nGk-sVvVrVnDRG 61 (95)
T 4avr_A 2 DTGEASYYGSRHAG---LRTASGERYN----PNAMTAAHRT------LPFGARVRVTNLD------NRR-SVVVRINDRG 61 (95)
T ss_dssp EEEEEEECCGGGTT---SBCTTSCBCC----TTSCEEECSS------SCTTCEEEEEETT------TCC-EEEEEEEECC
T ss_pred CEEEEEEECCccCC---CCCCCccCcC----CCCCEEEcCC------CCCCcEEEEEECC------CCc-EEEEEEccCC
Confidence 47999999964 22 3578874321 2357888763 4799999999653 355 9999999999
Q ss_pred CCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEE
Q 040256 85 PPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRI 128 (228)
Q Consensus 85 p~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V 128 (228)
|. |. ...||||..||.+|+....|+.+|+|+.+
T Consensus 62 P~---------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~ 94 (95)
T 4avr_A 62 PF---------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESL 94 (95)
T ss_dssp CC---------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred CC---------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence 95 66 36899999999999999999999999976
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.21 E-value=3.4e-06 Score=64.60 Aligned_cols=67 Identities=24% Similarity=0.485 Sum_probs=54.4
Q ss_pred eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-C
Q 040256 39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-S 116 (228)
Q Consensus 39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-~ 116 (228)
+|.+... +-|+ +..||.|++|+-. +|+ +|.|+.+|.-+ ..|+++.+||+.|.. .
T Consensus 51 ~IGga~~iagWN-S~~CGtC~~lty~-------ng~-sI~vlaID~A~---------------~gFnIs~~Amn~LT~G~ 106 (129)
T 2kqa_A 51 NVGGIPDIAGWD-SPSCGTCWKVTIP-------NGN-SIFIRGVDSGR---------------GGFNVNPTAFTKLVGST 106 (129)
T ss_dssp SEEEETTCCSTT-CTTCSCEEEEEET-------TTE-EEEEEEEEECS---------------SSEEECHHHHHHHHSSS
T ss_pred eeccchhhccCC-CCCCCceEEEEEc-------CCC-EEEEEEEccCC---------------CceeehHHHHHHhcCCc
Confidence 4544444 4566 7999999999973 155 89999999876 369999999999977 6
Q ss_pred CCCee-eEEEEEEE
Q 040256 117 KAGII-PVRYRRIL 129 (228)
Q Consensus 117 ~~G~v-~v~~~~V~ 129 (228)
..|+| +++|++|+
T Consensus 107 ~lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 107 EAGRVDNVNYVQVD 120 (129)
T ss_dssp SSCCBCSCEEEECC
T ss_pred ccCcEeEEEEEEcC
Confidence 77999 99999996
No 11
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=98.10 E-value=4.3e-06 Score=63.49 Aligned_cols=66 Identities=17% Similarity=0.408 Sum_probs=52.0
Q ss_pred eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-C
Q 040256 39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-S 116 (228)
Q Consensus 39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-~ 116 (228)
+|.+... +-|+ +..||.|+|++-. |+ +|.|..+|.-+ ..|+|+.+||+.|.. .
T Consensus 45 ~IGg~~~i~gwn-s~~CGtC~~lty~--------g~-si~vlaID~a~---------------~Gfnis~~A~n~LT~G~ 99 (120)
T 3m3g_A 45 YIGGAAAVAGWN-SASCGTCWKLQYS--------GH-TIYVLAVDHAA---------------SGFNIALDAMNALTGGQ 99 (120)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEET--------TE-EEEEEEEEECS---------------SSEEECHHHHHHHHTSC
T ss_pred ccccccccccCC-CCCCCceEEEEEC--------Ce-EEEEEEEecCC---------------CceeecHHHHHHhhCCc
Confidence 4444443 4454 5899999999974 55 89999999876 459999999999975 2
Q ss_pred --CCCeeeEEEEEEE
Q 040256 117 --KAGIIPVRYRRIL 129 (228)
Q Consensus 117 --~~G~v~v~~~~V~ 129 (228)
..|+|++++++|+
T Consensus 100 a~~lG~V~a~~~~V~ 114 (120)
T 3m3g_A 100 AVQLGRVSATATQVP 114 (120)
T ss_dssp HHHHCEEECEEEEEC
T ss_pred ceeeeeEeEEEEEcC
Confidence 3499999999997
No 12
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.03 E-value=4.9e-06 Score=63.79 Aligned_cols=71 Identities=21% Similarity=0.365 Sum_probs=52.1
Q ss_pred eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC-
Q 040256 39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS- 116 (228)
Q Consensus 39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~- 116 (228)
+|.+... .-|+ ...||.|+|++..+ +. ...++|.|..+|.-+ ..|+|+.+||+.|.+.
T Consensus 45 ~IGg~~~i~gwn-s~~CGtC~~lty~g-~~---~~~~si~vlaID~a~---------------~Gfnis~~Amn~LT~g~ 104 (127)
T 3suj_A 45 CIGGSSDIAGYN-SPNCGSCYQLTYSS-AH---TTPKSIYMVAIDRSA---------------EGFTASKQAMDDLTNKR 104 (127)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEECC-SS---SCCEEEEEEEEEECS---------------SSEEECHHHHHHHHTSC
T ss_pred eeccccccccCC-CCCCCceEEEEECC-CC---CcceEEEEEEEecCC---------------CceeecHHHHHHhcCCc
Confidence 3444332 3454 58999999999852 11 011389999999876 3599999999999753
Q ss_pred --CCCeeeEEEEEEE
Q 040256 117 --KAGIIPVRYRRIL 129 (228)
Q Consensus 117 --~~G~v~v~~~~V~ 129 (228)
..|+|+++|++|+
T Consensus 105 a~~lG~V~~~~~~V~ 119 (127)
T 3suj_A 105 AEELGTVNVDVRKVD 119 (127)
T ss_dssp HHHHSSEEEEEEEEC
T ss_pred cccceeEEEEEEEeC
Confidence 3489999999997
No 13
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.03 E-value=4.7e-06 Score=63.74 Aligned_cols=70 Identities=23% Similarity=0.381 Sum_probs=52.9
Q ss_pred eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC-
Q 040256 39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS- 116 (228)
Q Consensus 39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~- 116 (228)
+|.+... .-|+ +..||.|+|++-. +|. .+++|.|..+|.-+ ..|+|+.+||+.|.+-
T Consensus 46 ~IGg~~~i~gwn-S~~CGtC~~lty~-g~~----~~~si~vlaID~a~---------------~Gfnis~~Amn~LT~G~ 104 (125)
T 3suk_A 46 HIGASSDIGGFN-SPACGNCYTISFT-FQG----VTRSINLVAIDHAG---------------NGFNVAQAAMDELTNGN 104 (125)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEEE-ETT----EEEEEEEEEEEECS---------------SSEEECHHHHHHHHTSC
T ss_pred eeccccccccCC-CCCCCeeEEEEEc-CCC----cceEEEEEEEecCC---------------CceeecHHHHHHhcCCc
Confidence 3444443 4465 5899999999986 221 22389999999876 3599999999999762
Q ss_pred --CCCeeeEEEEEEE
Q 040256 117 --KAGIIPVRYRRIL 129 (228)
Q Consensus 117 --~~G~v~v~~~~V~ 129 (228)
..|+|+++|++|+
T Consensus 105 a~~lG~V~~~~~~V~ 119 (125)
T 3suk_A 105 AVALGTIDVQSQQVA 119 (125)
T ss_dssp HHHHCEEEEEEEEEC
T ss_pred ccccceEeEEEEEcC
Confidence 3499999999997
No 14
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=97.97 E-value=1.2e-05 Score=61.27 Aligned_cols=67 Identities=21% Similarity=0.422 Sum_probs=52.7
Q ss_pred EEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC--
Q 040256 40 TAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS-- 116 (228)
Q Consensus 40 ~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~-- 116 (228)
|.+... +-|++ ..||.|+|++... .|+ +|.|..+|.-+ ..|+|+.+||+.|..-
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~------~g~-si~vlaID~a~---------------~Gfnis~~Amn~LT~G~a 102 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSG------TGK-TIHVVGVDVAG---------------NGFNVGQRAMDDLTNGQA 102 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETT------TTE-EEEEEEEEECS---------------SSEEECHHHHHHHHTSCH
T ss_pred cccccccccCCC-CCCCceEEEEEcC------CCc-EEEEEEEecCC---------------CceeehHHHHHHhcCCcc
Confidence 554444 45655 9999999999741 144 89999999876 3599999999999752
Q ss_pred -CCCeeeEEEEEEE
Q 040256 117 -KAGIIPVRYRRIL 129 (228)
Q Consensus 117 -~~G~v~v~~~~V~ 129 (228)
..|+|++++++|+
T Consensus 103 ~~lG~V~a~~~qV~ 116 (122)
T 3sul_A 103 VALGNIDVTATLVD 116 (122)
T ss_dssp HHHSEEEEEEEEEC
T ss_pred eecceEeEEEEEcC
Confidence 3499999999997
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.96 E-value=2.3e-05 Score=60.41 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=51.6
Q ss_pred eEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCC-
Q 040256 39 ETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSK- 117 (228)
Q Consensus 39 ~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~- 117 (228)
+|.+.. | +...||.|+||+.. |+ +|.|..+|.-.+ ..-|||+.+||+.|..-.
T Consensus 49 ~igg~~---w-ns~~CGtCwkLtY~--------G~-sI~vlaID~a~~-------------g~~FnIs~~Amn~LT~G~~ 102 (136)
T 3sum_A 49 HFVAAP---E-AQTECGSCWKLRYK--------GN-HAFVTVVDRVEE-------------ANLFVGGTDLVKNLTTFNG 102 (136)
T ss_dssp SEEECC---B-TTBCTTCEEEEEET--------TE-EEEEEEEECCCS-------------TTEEEECHHHHHHHTCBTT
T ss_pred cccccc---c-CCCCCCceEEEEEC--------Ce-EEEEEEEecCCC-------------cceEeehHHHHHHHhCCCc
Confidence 455555 4 56899999999974 55 899999998763 123999999999997532
Q ss_pred ------CCeeeE-EEEEEE
Q 040256 118 ------AGIIPV-RYRRIL 129 (228)
Q Consensus 118 ------~G~v~v-~~~~V~ 129 (228)
.|+|++ +|++|+
T Consensus 103 a~~a~elG~Vda~~~~qVd 121 (136)
T 3sum_A 103 APEGYDWGTAQLFSAYQVD 121 (136)
T ss_dssp BCHHHHHSEEECSEEEEEC
T ss_pred cccceecceeeeeEEEEcC
Confidence 489999 999997
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=95.20 E-value=0.0085 Score=49.21 Aligned_cols=53 Identities=30% Similarity=0.454 Sum_probs=34.1
Q ss_pred EEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeech
Q 040256 40 TAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSM 107 (228)
Q Consensus 40 ~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~ 107 (228)
+||.+-.--.....|++|||++-++++. .|+ +.+|+||+...+- . .+||||..
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~~---~GK-kmiVQ~TNtG~Dl---------~--~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGPV---AGK-KMVVQSTSTGGDL---------G--SNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGGG---TTC-EEEEEEEEC----------------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCCCc---CCC-EEEEEEecccCCC---------C--CCceeEec
Confidence 4555522112236799999999886542 376 7999999998652 1 48999975
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=66.06 E-value=3.2 Score=28.76 Aligned_cols=19 Identities=32% Similarity=0.835 Sum_probs=15.3
Q ss_pred ChhccCCCCCCCceEEEEE
Q 040256 44 STALFNNGSTCGACFEIIC 62 (228)
Q Consensus 44 s~~~~~~g~~CG~C~~v~c 62 (228)
+...|..|..||.|+||.-
T Consensus 23 ~~~~~ygGlHCGE~feV~v 41 (81)
T 3nrl_A 23 DLESFYGGLHCGECFDVKV 41 (81)
T ss_dssp ETTEECCCCCTTCEEEEEE
T ss_pred ccccccCCcccccEEEEEE
Confidence 3445778999999999975
No 18
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=37.76 E-value=18 Score=25.77 Aligned_cols=27 Identities=37% Similarity=0.630 Sum_probs=21.4
Q ss_pred CCCCCeeeEEEEEEEecc---CCceEEEEc
Q 040256 115 PSKAGIIPVRYRRILCSK---QGGVKFEVK 141 (228)
Q Consensus 115 ~~~~G~v~v~~~~V~C~~---~g~i~~~v~ 141 (228)
.+..|.+.|+||-|+=+- .|.+.|.|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 467899999999999653 567888775
No 19
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=36.70 E-value=97 Score=21.75 Aligned_cols=46 Identities=13% Similarity=0.168 Sum_probs=28.2
Q ss_pred CcceEEEEEEcCCC-ceEEcCCCCCCeEEeCCCCCC-ccEEEEEEecCCcE
Q 040256 157 AGDVTAVQVKGSST-GWLPMSRNWGQNWQTGTVLLG-QGLSFQVTTSDGKT 205 (228)
Q Consensus 157 ~~~I~~Vev~~~~~-~w~~m~r~~g~~W~~~~~~~g-~p~~vRvT~~~G~~ 205 (228)
++.|.+||+.-.+. -...-.+.|...|... .| -.|..|.+|..|..
T Consensus 29 dg~V~kVef~vdg~~vg~dt~apy~~~w~~~---~G~htl~a~AtD~~G~~ 76 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDREAPYEYEWKAV---EGNHEISVIAYDDDDAA 76 (98)
T ss_dssp SSCEEEEEEEETTEEEEEECSSSEEEEEECC---SEEEEEEEEEEETTCCB
T ss_pred CCCEEEEEEEECCEEecccccCCEEEEEEcC---CccEEEEEEEEECCCCE
Confidence 35799999997763 2233334444456543 23 26677888988854
No 20
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=36.55 E-value=20 Score=25.73 Aligned_cols=27 Identities=33% Similarity=0.546 Sum_probs=21.4
Q ss_pred CCCCCeeeEEEEEEEecc---CCceEEEEc
Q 040256 115 PSKAGIIPVRYRRILCSK---QGGVKFEVK 141 (228)
Q Consensus 115 ~~~~G~v~v~~~~V~C~~---~g~i~~~v~ 141 (228)
.+..|.+.|+||-|+=+- .|.+.|.|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 467899999999999653 467888775
No 21
>1v8h_A Sulfur oxidation protein SOXZ; lithotrophic sulfur oxidation, unknown function, structural genomics; 1.20A {Thermus thermophilus HB8} SCOP: b.1.18.19
Probab=27.17 E-value=1.1e+02 Score=21.77 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=18.8
Q ss_pred cCCCCCCeEEeCCCCCCccEEEEEEecCCcEEEEc
Q 040256 175 MSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFD 209 (228)
Q Consensus 175 m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~ 209 (228)
+..+.+-.|.+...-.| .|+++.+|++|+.....
T Consensus 68 iS~nP~~~F~~~~~~~g-~l~v~~~Dn~G~~~~~~ 101 (107)
T 1v8h_A 68 TSANPLYAFKFKAEKAG-TFTIKLKDTDGDTGEAS 101 (107)
T ss_dssp CCSSCEEEEEEECCSCE-EEEEEEEETTSCEEEEE
T ss_pred cccCCeEEEEEecCCCc-eEEEEEEECCCCEEEEE
Confidence 44444444554332233 57777778777766554
No 22
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=27.16 E-value=64 Score=22.77 Aligned_cols=28 Identities=25% Similarity=0.595 Sum_probs=20.9
Q ss_pred cEEEEEEecC--CcE--EEEccccCCCCCCCe
Q 040256 193 GLSFQVTTSD--GKT--LQFDNVAPRNWQFGQ 220 (228)
Q Consensus 193 p~~vRvT~~~--G~~--v~~~~vip~~w~~g~ 220 (228)
.++|+||+.+ +++ |++..++|+.|+.|+
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGq 61 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGV 61 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTC
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCC
Confidence 6888899862 444 445689999999876
No 23
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=23.71 E-value=1e+02 Score=27.33 Aligned_cols=24 Identities=21% Similarity=0.450 Sum_probs=18.3
Q ss_pred eeCCCcceEEEEEEcCCC-ceEEcC
Q 040256 153 NVGGAGDVTAVQVKGSST-GWLPMS 176 (228)
Q Consensus 153 n~~G~~~I~~Vev~~~~~-~w~~m~ 176 (228)
+.+|...|++|||..+++ +|+...
T Consensus 291 ~sGgg~~I~rVEVS~DgG~tW~~A~ 315 (393)
T 1ogp_A 291 VSGGGRGIERVDISLDGGKNWVEAS 315 (393)
T ss_dssp ECSTTCCEEEEEEESSTTSSCEECE
T ss_pred EcCCCCCEEEEEEEcCCCCCceEee
Confidence 445457899999998874 898644
No 24
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=23.52 E-value=1.2e+02 Score=26.64 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=30.4
Q ss_pred eeCCCcceEEEEEEcCCC-ceEEcCCC---------CC-CeEEeCCCC-CCc--cEEEEEEecCCc
Q 040256 153 NVGGAGDVTAVQVKGSST-GWLPMSRN---------WG-QNWQTGTVL-LGQ--GLSFQVTTSDGK 204 (228)
Q Consensus 153 n~~G~~~I~~Vev~~~~~-~w~~m~r~---------~g-~~W~~~~~~-~g~--p~~vRvT~~~G~ 204 (228)
..+|...|++|||..+++ +|+..... |- -.|++.-++ ++. -+.+|-||..|.
T Consensus 278 ~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~ 343 (372)
T 2a9d_A 278 WSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 343 (372)
T ss_dssp ECSTTCCEEEEEEESBSSSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred EcCCCCCEEEEEEEcCCCCcceEeEcCCcccccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCC
Confidence 344445799999998874 89965432 11 136543211 222 455677887773
No 25
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=22.01 E-value=91 Score=27.44 Aligned_cols=50 Identities=20% Similarity=0.417 Sum_probs=30.7
Q ss_pred CCCcceEEEEEEcCCC-ceEEcCCC-----CC-CeEEeCCC-CCC-ccEEEEEEecCCc
Q 040256 155 GGAGDVTAVQVKGSST-GWLPMSRN-----WG-QNWQTGTV-LLG-QGLSFQVTTSDGK 204 (228)
Q Consensus 155 ~G~~~I~~Vev~~~~~-~w~~m~r~-----~g-~~W~~~~~-~~g-~p~~vRvT~~~G~ 204 (228)
+|...|++|||..+++ +|+...-. +- -.|++.-+ .++ .-+.+|-+|..|.
T Consensus 289 ~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~ 347 (373)
T 2blf_A 289 DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNARGE 347 (373)
T ss_dssp CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEETTSC
T ss_pred cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEcCCCC
Confidence 4557899999998875 89964432 11 24554422 223 1355677887773
No 26
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=21.24 E-value=86 Score=23.68 Aligned_cols=28 Identities=18% Similarity=0.570 Sum_probs=20.5
Q ss_pred cEEEEEEecCCc-EEEEccccCCCCCCCe
Q 040256 193 GLSFQVTTSDGK-TLQFDNVAPRNWQFGQ 220 (228)
Q Consensus 193 p~~vRvT~~~G~-~v~~~~vip~~w~~g~ 220 (228)
.++|+|||.... .|++..++|+.|+-|+
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGq 78 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQ 78 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTS
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCC
Confidence 688888886443 3445689999998876
No 27
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=20.10 E-value=1.5e+02 Score=26.86 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=30.4
Q ss_pred eeCCCcceEEEEEEcCCC-ceEEcCCC---------CC-CeEEeCCCC-CCc--cEEEEEEecCCc
Q 040256 153 NVGGAGDVTAVQVKGSST-GWLPMSRN---------WG-QNWQTGTVL-LGQ--GLSFQVTTSDGK 204 (228)
Q Consensus 153 n~~G~~~I~~Vev~~~~~-~w~~m~r~---------~g-~~W~~~~~~-~g~--p~~vRvT~~~G~ 204 (228)
..+|...|++|||..+++ +|+..... |- -.|++.-++ ++. -+.+|-||..|.
T Consensus 372 ~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~ 437 (466)
T 1sox_A 372 WSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 437 (466)
T ss_dssp ECSTTCCEEEEEEESBTTSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred EcCCCCCEEEEEEEcCCCCcceEeecCCcccccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCC
Confidence 344445699999998874 89965432 11 135543211 222 455677887773
Done!