BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040258
(590 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/621 (67%), Positives = 476/621 (76%), Gaps = 51/621 (8%)
Query: 1 MGTFQSFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLFSATS 60
M TF SFRKA GA+KDST V +AKVNSEFKDLD+AIVKATNHVE PKERH+R++FSATS
Sbjct: 1 MATFNSFRKAVGAIKDSTTVSIAKVNSEFKDLDVAIVKATNHVESAPKERHIRRIFSATS 60
Query: 61 VIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHIL 120
V++PRADVAYCIHALAKRLSKTRNW+VAIK LIVIHRTLREGDPTFREELLNYSHRGHIL
Sbjct: 61 VVQPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRGHIL 120
Query: 121 QISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHS-- 178
+ISNFKDD+SPLAWDCSAW+RTYALFLEERLEC+R+L+YDIE+ERL K S ++K
Sbjct: 121 RISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFN 180
Query: 179 -----RTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYC 233
RTR+L+ +ELLEQLPALQQLL+RLIGC PEG+AY NYL+QYALALVLKESFKIYC
Sbjct: 181 ASQTYRTRMLSDEELLEQLPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYC 240
Query: 234 AINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLR 293
AINDGIINLVDMFF+MSRHDAVKALNIYKRAGQQAE+LADFYEYCKGLELARNFQFPTLR
Sbjct: 241 AINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLR 300
Query: 294 QPPPSFLATMEEYIREAPQSGTVQKRLEYHETVEEDD---------KPEEPVESEKPEEN 344
QPPPSFLATME+YI+EAPQSG+VQK+LEY E EE+ +PEEP E++ +EN
Sbjct: 301 QPPPSFLATMEDYIKEAPQSGSVQKKLEYQEKEEEEQEEEEAEHSVQPEEPAEADNQKEN 360
Query: 345 PEESQPLVEAEEGPQPREEEVEPAPLIPAEATGDLLGLNEEVNPKAAELEESNALALAIV 404
E QPL+E EE Q + EE + P + T DLLGLN E+NPKAAE+E+ NALALAI
Sbjct: 361 SEGDQPLIEEEEEDQEKIEEEDAKPSFLID-TDDLLGLN-EINPKAAEIEDRNALALAIY 418
Query: 405 QPGND-PLSSN-RALKEISGSGWELALVT----TPSNNNCQVVDSKLAGGFDKLLLDSLY 458
PG++ P SN +L E GSGWELALVT +NN ++KLAGGFD LLLDSLY
Sbjct: 419 PPGHEAPGPSNILSLIETGGSGWELALVTPQNNNNNNNPRPAPNTKLAGGFDNLLLDSLY 478
Query: 459 EDDSARRHIQLQNAGYGHAGM----AVPNPFEHQQHDPFAVSNSIAPPTNVQMALLAQQQ 514
EDDSARR IQL NAGYGH G+ A PNPF+ QQ DPFA+SN+IAPPTNVQMA
Sbjct: 479 EDDSARRQIQLTNAGYGHGGIDTTAAPPNPFQMQQ-DPFAMSNNIAPPTNVQMA------ 531
Query: 515 QQHQHLQQMMLQQQQQQHQQMNMMVSYQNQTQYPQQSQLPQHQQQMQQMNYSNPFGDPFL 574
QQQQQ Q M S N T Q H Q + SNPFGD FL
Sbjct: 532 -----------MQQQQQQQMTMMHQSPYNYTHPHDYHQNHHHHQFSAGPSPSNPFGDAFL 580
Query: 575 AL---PNGSTPQQGN--HMLL 590
AL P + PQQ N HMLL
Sbjct: 581 ALPPPPGSAGPQQNNHHHMLL 601
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/622 (67%), Positives = 475/622 (76%), Gaps = 63/622 (10%)
Query: 1 MGTFQSFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLFSATS 60
MGTF SFRKAYGALKD+T VGLAKVNSEFKDLDIAIVKATNHVE PPKERHVRK+FSATS
Sbjct: 1 MGTFTSFRKAYGALKDTTTVGLAKVNSEFKDLDIAIVKATNHVESPPKERHVRKIFSATS 60
Query: 61 VIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHIL 120
VI+PRADVAYCIHAL+KRLSKTRNW+VA+K LIVIHRTLREGDPTFREELLNYSHR HIL
Sbjct: 61 VIQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRRHIL 120
Query: 121 QISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHSRT 180
+ISNFKDD+SPLAWDCSAWVRTYALFLEERLEC+R+L+YDIE+ERL K+S A+K H RT
Sbjct: 121 RISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTH-RT 179
Query: 181 RLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGII 240
R+L+ ++LLEQLPALQQLL+RLIGC PEGAAY NYL+QYALALVLKESFKIYCAINDGII
Sbjct: 180 RMLSGEDLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGII 239
Query: 241 NLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFL 300
NLVDMFF+MSRHDAVKALNIYKRAGQQAE+LA+FY+YCKGLELARNFQFPTLRQPPPSFL
Sbjct: 240 NLVDMFFEMSRHDAVKALNIYKRAGQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFL 299
Query: 301 ATMEEYIREAPQSGTVQKRL-----EYHETVEEDDKPEEPVESEKPEENPEESQPLV--- 352
ATMEEYI+EAPQSG+VQK+L E E +E+++PEEP E E EN E QPL+
Sbjct: 300 ATMEEYIKEAPQSGSVQKKLEYQEKEEEEQEQEEEQPEEPAEEENQNENTENDQPLIEEE 359
Query: 353 EAEEGPQPREEEVEPAPLIPAEATGDLLGLNEEVNPKAAELEESNALALAIVQPGNDPL- 411
E E + EE +P+PLI T DLLGL+ E+NPKAAE+E++NA +LAI PG++
Sbjct: 360 EEEPKEEIEVEEAKPSPLI---DTDDLLGLH-EINPKAAEIEQNNAFSLAIYPPGHETSA 415
Query: 412 -SSNRALKEISGSGWELALVTTPSNNNCQ-----VVDSKLAGGFDKLLLDSLYEDDSARR 465
S++ +L E GSGWELALVT +NNN V+ +KL GGFD LLLDSLYEDD+ARR
Sbjct: 416 PSNSLSLIEAGGSGWELALVTPQNNNNNNNNPRPVIATKLGGGFDNLLLDSLYEDDTARR 475
Query: 466 HIQLQNAGYGHAGMAV--------PNPFEHQQHDPFAVSNSIAPPTNVQMALLAQQQQQH 517
IQL NAGYG A+ PNPF QQ DPFA+SN++APPTNVQM
Sbjct: 476 QIQLTNAGYGFGATAIPGALASSNPNPFGVQQ-DPFAMSNNMAPPTNVQM---------- 524
Query: 518 QHLQQMMLQQQQQQHQQMNMMVSYQNQTQYPQQSQLPQHQQQM----QQMNYSNPFGDPF 573
QQQQ MN Y N P H Q + NPFGDPF
Sbjct: 525 --------AMQQQQMMMMNNQSPYNNNYS-------PYHHHQFSPNPSTSSSPNPFGDPF 569
Query: 574 LALPN--GSTPQQ---GNHMLL 590
LALP ST QQ NHMLL
Sbjct: 570 LALPAPPSSTTQQQYSPNHMLL 591
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 620 bits (1599), Expect = e-176, Method: Compositional matrix adjust.
Identities = 344/592 (58%), Positives = 406/592 (68%), Gaps = 49/592 (8%)
Query: 1 MGTFQSFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLFSATS 60
MGT QS+RKAYGALKDSTKVGL +VNSE+ DLD+AIVKATNHVECPPK+RH+RK+F+ATS
Sbjct: 1 MGTLQSWRKAYGALKDSTKVGLVRVNSEYADLDVAIVKATNHVECPPKDRHLRKIFAATS 60
Query: 61 VIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHIL 120
V R RADVAYCIHAL++RL KTRNW VA+KTLIVIHR LREGDPTFREELLN+S RG IL
Sbjct: 61 VTRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRGRIL 120
Query: 121 QISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHSRT 180
Q+SNFKDDSSP+AWDCSAWVRTYALFLEERLECFR+L+YD E+ERL KS+PG K +SRT
Sbjct: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEAERLPKSNPGQDKGYSRT 180
Query: 181 RLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGII 240
R L+ +ELLEQLPALQQLL+RLIGC PEGAA HN+++QYALALVLKESFK+YCAINDGII
Sbjct: 181 RDLDGEELLEQLPALQQLLYRLIGCRPEGAANHNHVIQYALALVLKESFKVYCAINDGII 240
Query: 241 NLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFL 300
NL+D FF+M++H+A+ +L IYKRAGQQA SL+DFYE CKGLELARNFQFP LR+PP SFL
Sbjct: 241 NLIDKFFEMAKHEAITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPVLREPPQSFL 300
Query: 301 ATMEEYIREAPQSGTVQKRLEYHETVEEDDKPEEPVESEKPEENPEESQPLVEAEEGPQP 360
TMEEYI+EAP+ V E + +P++ + +E E + EE + L +
Sbjct: 301 TTMEEYIKEAPRVVDVPA-----EPLLLTYRPDDGLTTEDTEPSHEEREMLPSDDVVVVS 355
Query: 361 REEEVEPAPLIPAEA-----TGDLLGLNEEVNPKAAELEESNALALAIVQPGNDPLSSNR 415
E E P P A A T DL GLN P + +E+ NALALAIV DP + +
Sbjct: 356 EETEPSPPPPPSANAQNFIDTDDLWGLNTGA-PDTSVIEDQNALALAIVSTDADPPTPHF 414
Query: 416 AL-KEISGSGWELALVTTPSNNNCQVVDSKLAGGFDKLLLDSLYEDDSARRHIQLQNAGY 474
+GWELALVT PS++ + KLAGG D L L SLY+D + +I Q Y
Sbjct: 415 GQPNNYDPTGWELALVTAPSSDISASTERKLAGGLDTLTLSSLYDDGA---YIASQRPVY 471
Query: 475 GHAGMAVPNPFEHQQHDPFAVSNSIAPPTNVQMALLAQQQQQHQHLQQMMLQQQQQQHQQ 534
G PNPF HDPFA SN APP QQQ + QQ QHQ
Sbjct: 472 ---GAPAPNPF--ASHDPFASSNGTAPP--------PQQQAVNNPFGAY---QQTYQHQP 515
Query: 535 MNMMVSYQNQTQYPQQSQLPQHQQQMQQMNYSNPFGDPFLALPNGSTPQQGN 586
+YQ+Q+ P N SNPFGD F P QQ N
Sbjct: 516 ---QPTYQHQSNPP--------------TNNSNPFGD-FGEFPVNPVSQQPN 549
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 309/517 (59%), Positives = 382/517 (73%), Gaps = 30/517 (5%)
Query: 1 MGTFQSFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLFSATS 60
MGT QS+R+AYGALKD+TKVGL +VNS++ +LD+AIVKATNHVECPPK+RH+RK+F ATS
Sbjct: 1 MGTLQSWRRAYGALKDTTKVGLVRVNSDYAELDVAIVKATNHVECPPKDRHLRKIFLATS 60
Query: 61 VIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHIL 120
IRPRADVAYCIHAL++RL KTRNW VA+K L+VIHR LR+GDPTFREELLN+S +G I+
Sbjct: 61 AIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKGRIM 120
Query: 121 QISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHSRT 180
QISNFKDDSSP+AWDCS WVRTYALFLEERLECFR+L+YDIE+ERL K SPG K +S+T
Sbjct: 121 QISNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDIEAERLPKVSPGQEKGYSKT 180
Query: 181 RLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGII 240
R L+ ++LLEQLPALQQLL RLIGC PEGAA HN+++QYAL+LVLKESFK+YCAIN+GII
Sbjct: 181 RDLDGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHIIQYALSLVLKESFKVYCAINEGII 240
Query: 241 NLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFL 300
NLV+ FF+M RH+A+KAL IYKRAG QA +L+ FYE CKGLELARNFQFP LR+PP SFL
Sbjct: 241 NLVEKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFL 300
Query: 301 ATMEEYIREAPQSGTVQKR---LEYHETVEEDDKPEEPVESEKPEENPEESQPLVEAEEG 357
TMEEY+R+APQ V L Y P++ + SE + EE + ++
Sbjct: 301 TTMEEYMRDAPQMVDVTSGPLLLTY--------TPDDGLTSEDVGPSHEEHETSSPSDSA 352
Query: 358 PQPREE-----EVEPAPLIPAE--ATGDLLGLNEEVNPKAAELEESNALALAIVQPGND- 409
P EE + P+ P T DLLGL+++ P + + NALALA+V D
Sbjct: 353 VVPSEETQLSSQSPPSVETPQNFIDTDDLLGLHDD-TPDPLAILDQNALALALVSNDVDS 411
Query: 410 -PLSSNRALKEISGSGWELALVTTPSNNNCQVVDSKLAGGFDKLLLDSLYEDDSARRHIQ 468
P S +A +++ SGWELALVTTPSN+ + +LAGG D L L+SLY+D + R
Sbjct: 412 SPFSFGQA-RDLDPSGWELALVTTPSNDISAATERQLAGGLDTLTLNSLYDDGALR---A 467
Query: 469 LQNAGYGHAGMAVPNPFEHQQHDPFAVSNSIAPPTNV 505
Q Y G+ NPFE Q D FA S+S++PP+ V
Sbjct: 468 AQQPAY---GVPASNPFEVQ--DLFAFSDSVSPPSAV 499
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 291/590 (49%), Positives = 363/590 (61%), Gaps = 72/590 (12%)
Query: 7 FRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLFSATSVIRPRA 66
R+ GA+KD+T V LAKVNS++K+LDIAIVKATNHVE P KER++R +F A S RPRA
Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSDYKELDIAIVKATNHVERPSKERYIRAIFMAISATRPRA 70
Query: 67 DVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSH-RGHILQISNF 125
DVAYCIHALA+RLS+T NW VA+KTLIVIHR LRE D TF EE++NYS R H+L +S+F
Sbjct: 71 DVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSHF 130
Query: 126 KDDSSPLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHSRTRLLNC 185
KDDS P AW SAWVR YALFLEERLECFR+L+YD+E + RT+ L+
Sbjct: 131 KDDSGPNAWAYSAWVRFYALFLEERLECFRVLKYDVEVD------------PPRTKDLDT 178
Query: 186 DELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGIINLVDM 245
+LLEQLPALQ+LLFR++ C PEGAA N+++Q AL++V+ ES KIY A+ DGI NLVD
Sbjct: 179 PDLLEQLPALQELLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALTDGIDNLVDK 238
Query: 246 FFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEE 305
FFDM R+DAVKAL++Y+RA +QA L++F+E CK + + R +F + QPP SFL MEE
Sbjct: 239 FFDMQRNDAVKALDMYRRAVKQAGRLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAMEE 298
Query: 306 YIREAPQSGTVQKRLEYHETVEEDDKPEE--PVESEKPEENPEESQPLVEAEEGPQPREE 363
Y++EAP + V+K + VE+ P+E +E E P + EE P+P +
Sbjct: 299 YVKEAPLAAGVKK----EQVVEKLTAPKEILAIEYEIPPKVVEEK------PASPEPVKA 348
Query: 364 EVEPAPLIPAEATGDLLGLNEEVNPKAAELEESNALALAIVQPGNDPLSSNRALKEISGS 423
E E P E DLL +++ P +ELEE NALALAIV + S + +
Sbjct: 349 EAEK----PVEKQPDLLSMDDPA-PMVSELEEKNALALAIVPVSVEQPHSTTDFTNGNST 403
Query: 424 GWELALVTTPSNNNCQVVDSKLAGGFDKLLLDSLYEDDSARRHIQLQNAGYGHAGMAVPN 483
GWELALVT PS+N DSKLAGG DKL LDSLYED A R Q QN Y N
Sbjct: 404 GWELALVTAPSSNEGAAADSKLAGGLDKLTLDSLYED--AIRVSQQQNRSY--------N 453
Query: 484 PFE-------HQQHDPFAVSNSIAPPTNVQMALLAQQQQQHQHLQQMMLQQQQQQHQQMN 536
P+E H H PF SN +A P QMA Q HQ QHQ
Sbjct: 454 PWEQNPVHNGHMMHQPFYASNGVAAPQPFQMA-----NQNHQTF--------GYQHQNAG 500
Query: 537 MMVSYQNQTQYPQQSQLPQHQQQMQQMNYSNPFGDPFLALPNGSTPQQGN 586
MM+ Q Q QQ N +NPFG+PF++ N PQ N
Sbjct: 501 MMMGPVQQP------------YQQQQQNMNNPFGNPFVSNGNPQQPQGYN 538
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 202/605 (33%), Positives = 323/605 (53%), Gaps = 73/605 (12%)
Query: 1 MGTFQSFRKAYGALKDSTKVGLAKVN---SEFKDLDIAIVKATNHVECPPKERHVRKLFS 57
MG+ F++A GA+KD T VGLAKVN + +LD+AIVKAT H E P +E+++R++ S
Sbjct: 1 MGS-SKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILS 59
Query: 58 ATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRG 117
TS R+ + C+ L++RL+KT+ W VA+KTLI+I R L EGD + +E+ + RG
Sbjct: 60 LTSY--SRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRG 117
Query: 118 -HILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILR-------YDI-----ESE 164
+L +S+F+D S +WD SA+VRTYAL+L+ERL+ FR+ Y + E E
Sbjct: 118 TRLLNMSDFRDVSRSNSWDYSAFVRTYALYLDERLD-FRMQARHGKRGVYCVGGEADEEE 176
Query: 165 RLTKSSPGATKVHSRTR---LLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYAL 221
+ ++ +T + R++ + +++ ++ LQQLL R + C P G A +N +V AL
Sbjct: 177 QDQAAADLSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDRFLACRPTGNARNNRVVIVAL 236
Query: 222 ALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGL 281
++KESF+IY + + + L++ F ++ D++K +I+ R +Q E L FY +CK +
Sbjct: 237 YPIVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNM 296
Query: 282 ELARNFQFPTLRQPPPSFLATMEEYIRE-APQSGTVQKRLEYHETVEEDDKPE-EPVESE 339
+AR+ ++P + + L M+E+IR+ + T Q + E E+DD+ E V E
Sbjct: 297 GIARSSEYPEIEKITQKKLDLMDEFIRDKSALEHTKQSKSVKSEADEDDDEARTEEVNEE 356
Query: 340 KPEENPEES--QPLVEAEEGPQPREEEVEPAPL-IPAEATGDLLGLNEEVNPKAAELEES 396
+ + N ++ +P + E+ +P EE E + E GDLL L +A + +S
Sbjct: 357 QEDMNAIKALPEPPPKEEDDVKPEEEAKEEVIIEKKQEEMGDLLDLGNTNGGEAGQAGDS 416
Query: 397 NALALAIVQPGNDPLSSN---------RALKEISGSGWELALVTTPSNNNCQVVDSKLAG 447
ALAL + P +S A K+ S WE ALV T +N + Q S+L G
Sbjct: 417 LALALF-----DGPYASGSGSESGPGWEAFKDDSAD-WETALVQTATNLSGQ--KSELGG 468
Query: 448 GFDKLLLDSLYEDDSARRHIQLQNA----------GYGHAG------MAVPNPFEHQQH- 490
GFD LLL+ +Y+ + ++ A +G AG +A+P P +
Sbjct: 469 GFDMLLLNGMYQHGAVNAAVKTSTAYGASGSASSMAFGSAGRPAATMLALPAPSTANGNA 528
Query: 491 ---------DPFAVSNSIAPPTNVQMALLAQQQQQHQHLQQMMLQQQQQQHQQMNMMVSY 541
DPFA S +APP VQM + ++Q+ +QMM Q + +Q +M +
Sbjct: 529 GNINSPVPMDPFAASLEVAPPAYVQMNDMEKKQRMLME-EQMMWDQYSRDGRQGHMNLR- 586
Query: 542 QNQTQ 546
QNQ Q
Sbjct: 587 QNQNQ 591
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 293/590 (49%), Gaps = 96/590 (16%)
Query: 6 SFRKAYGALKDSTKVGLAKVNSEFK-DLDIAIVKATNHVECPPKERHVRKLFSATSVIRP 64
S RKA G +KD T +G+AKV S DL++AIVKAT+H + ++++R++ S TS+
Sbjct: 4 SMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTSL--S 61
Query: 65 RADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRG-HILQIS 123
R V C+ ++++RL KTR+WIVA+K L+++HR L EGDP F+EE+L + RG IL +S
Sbjct: 62 RGYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMS 121
Query: 124 NFKDDSSPLAWDCSAWVRTYALFLEERLEC------------------------------ 153
+F+D++ +WD SA+VRTYA +L++RLE
Sbjct: 122 DFRDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSRD 181
Query: 154 -FRI---LRYDIESE------RLTKSSPGATKVHSR--------TRLLNCDELLEQLPAL 195
FR YD E+ + ++S ++ +R R + + + ++ L
Sbjct: 182 DFRSPPPRTYDYETGNGFGMPKRSRSFGDVNEIGAREEKKSVTPLREMTPERIFGKMGHL 241
Query: 196 QQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAV 255
Q+LL R + C P G A ++ ++ A+ V+KESF++Y I + + L+D FFDM D V
Sbjct: 242 QRLLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDCV 301
Query: 256 KALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYIREAPQSGT 315
KA + Y A +Q + L FY +CK +AR+ ++P +++ L T+EE++R+ +
Sbjct: 302 KAFDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRAK 361
Query: 316 VQKRLEYHETVEEDDKPEEPVESEKPEENPEESQPLVEAEEGPQPREEEVEPAPLIPAEA 375
+R E EEPV+ + + + E P +
Sbjct: 362 SPERKEIEAPPAPAPPVEEPVDMNEIKA--------LPPPENHTPPPPPAPEPKPQQPQV 413
Query: 376 TGDLLGLNEEVNPKAAELEESNALALAIVQ--PGND----PLSSNRALK--------EIS 421
T DL+ L E+ + ++ N ALA+ P N+ SS+ + E+
Sbjct: 414 TDDLVNLRED---DVSGDDQGNKFALALFAGPPANNGKWEAFSSDNNVTSAWQNPAAELG 470
Query: 422 GSGWELALVTTPSNNNCQVVDSKLAGGFDKLLLDSLYEDDSARRHIQLQN-AGYGHAGMA 480
+ WELALV T SN Q + + GG D LLL+ +Y+ + R+H+ G + +A
Sbjct: 471 KADWELALVETASNLEHQ--KAAMGGGLDPLLLNGMYDQGAVRQHVSTSELTGGSSSSVA 528
Query: 481 VPNPFEHQQH----------------DPFAVSNSIAPPTNVQMALLAQQQ 514
+P P + H DPFA S +I PP+ VQMA + ++Q
Sbjct: 529 LPLPGKVNSHILALPAPDGTVQKVNQDPFAASLTIPPPSYVQMAEMDKKQ 578
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 305/607 (50%), Gaps = 92/607 (15%)
Query: 1 MGTFQSFRKAYGALKDSTKVGLAKV---NSEFKDLDIAIVKATNHVECPPKERHVRKLFS 57
MG+ ++A GA+KD T VGLAKV +S +L+IA+VKAT H + P +++++R++
Sbjct: 1 MGS-SKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILC 59
Query: 58 ATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRG 117
TS R V+ C+ L++RL+KT+NW VA+KTLI+I R L +GD + +E+ + RG
Sbjct: 60 LTSY--SRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRG 117
Query: 118 -HILQISNFKDDSSPLAWDCSAWVRTYALFLEERLE------------------------ 152
+L +S+F+D S +WD SA+VRTYAL+L+ERL+
Sbjct: 118 TRLLNMSDFRDASQSDSWDYSAFVRTYALYLDERLDYRMQGRRGKKKSGGGGGGDGDSGE 177
Query: 153 --CFRILRYDIESERL-TKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEG 209
R DI S+ + KS P A + +++ ++ LQQLL R + C P G
Sbjct: 178 EDDHRGTSNDIRSKAIVVKSKPVAE--------MKTEKIFNRVQHLQQLLDRFLACRPTG 229
Query: 210 AAYHNYLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAE 269
A +N +V A+ ++KESF++Y I + + L++ F ++ HD++K I+ R +Q +
Sbjct: 230 NAKNNRVVIVAMYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFD 289
Query: 270 SLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYIRE--APQSGTVQKRLEYHETVE 327
L FY +CK + +AR+ ++P L + L M+E+IR+ A + T + + E
Sbjct: 290 ELDPFYGWCKNMAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQTTKSSSKRSNKSE 349
Query: 328 EDDKPEEPVESEKPEENPEESQP-----LVEAEEGPQPREEEVEPAPLIPAEATGDLLGL 382
E++ E ++ + + N ++ P E EE +++VE + + GDLL L
Sbjct: 350 EEESKTEYIQENQEDLNSIKALPAPEQKEEEEEEEKMETKKDVEEV-VSRQDQEGDLLDL 408
Query: 383 NEEVNPKAAELEESNALAL--------AIVQPGNDPLSSNRALKEISGSGWELALVTTPS 434
+E A + +S ALAL + PG + + N A WE LV + +
Sbjct: 409 TDEAGVTAGTVGDSLALALFDGVVGTESASGPGWEAFNDNSA-------DWETDLVRSAT 461
Query: 435 NNNCQVVDSKLAGGFDKLLLDSLYEDDSARRHIQLQN----------AGYGHAG------ 478
+ Q S+L GGFD LLLD +Y+ + ++ +G AG
Sbjct: 462 RLSGQ--KSELGGGFDTLLLDGMYQYGAVNAAVKTSTAYGSSGSASSVAFGSAGSPAASM 519
Query: 479 MAVPNPFEHQQH--------DPFAVSNSIAPPTNVQMALLAQQQQQHQHLQQMMLQQQQQ 530
+A+P P DPFA S +APP VQM + ++Q+ +Q+M Q +
Sbjct: 520 LALPAPPPTANGNRNSPVMVDPFAASLEVAPPAYVQMNDMEKKQRLLME-EQIMWDQYNR 578
Query: 531 QHQQMNM 537
+Q +M
Sbjct: 579 SGRQGHM 585
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 184/326 (56%), Gaps = 25/326 (7%)
Query: 7 FRKAYGALKDSTKVGLAKV------NSEFKDLDIAIVKATNH-VECPPKERHVRKLFSAT 59
+KA GA+KD T + LAKV + L++AI+KAT+H E P +R V ++
Sbjct: 5 LKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEILGII 64
Query: 60 SVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRG-H 118
S + A A C A+ +R+ +TRNWIVA+K+L+++ R ++GDP F E+L+ RG
Sbjct: 65 SSKKSHA--ASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGAK 122
Query: 119 ILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECF-------------RILRYDIESER 165
IL +S+F+DDS+ WD +A+VRT+AL+L+ERL+CF + R S
Sbjct: 123 ILNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQRRYTNREQTGRISTNSTT 182
Query: 166 LTKSSPGA-TKVHS-RTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALAL 223
++ +P A K H R + LL+++ Q+LL R I P G A N LV+ +L
Sbjct: 183 RSRFNPKAGIKSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGDAKANRLVKMSLYA 242
Query: 224 VLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLEL 283
V++ESF +Y I+DG+ L+D FF + + A RA +Q E L FY+ K + +
Sbjct: 243 VMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKSIGI 302
Query: 284 ARNFQFPTLRQPPPSFLATMEEYIRE 309
R ++P++++ L T++E++++
Sbjct: 303 GRTSEYPSIQKISLELLETLQEFLKD 328
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 111/149 (74%), Gaps = 4/149 (2%)
Query: 6 SFRKAYGALKDSTKVGLAKVNSEFK-DLDIAIVKATNHVECPPKERHVRKLFSATSVIRP 64
S RKA GA+KD T +G+AKV S DL++AIVKAT+H + P E+++R++ + TS+
Sbjct: 4 SIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLTSL--S 61
Query: 65 RADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRG-HILQIS 123
R + C+ ++++RLSKTR+W+VA+K L+++HR L EGDP F+EE+L + RG +L +S
Sbjct: 62 RGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLNMS 121
Query: 124 NFKDDSSPLAWDCSAWVRTYALFLEERLE 152
+F+D++ +WD SA+VRTYA +L++RLE
Sbjct: 122 DFRDEAHSSSWDHSAFVRTYAGYLDQRLE 150
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 171/370 (46%), Gaps = 43/370 (11%)
Query: 175 KVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCA 234
KV + R + + + ++ LQ+LL R + P G A ++ ++ AL V++ESFK+Y
Sbjct: 241 KVVTPLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYAD 300
Query: 235 INDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQ 294
I + + L+D FFDM D VKA + Y A +Q + L FY +CK +AR+ ++P +++
Sbjct: 301 ICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQR 360
Query: 295 PPPSFLATMEEYIREAPQSGTVQKRLEYHETVEEDDKPEEPVESEKPEENPEESQPLVEA 354
L T+EE++R+ + G +R E ++ E + + + +
Sbjct: 361 ITSKLLETLEEFVRDRAKRGKSPERKEIEAPPPVVEEEEPEPDMNEIKA--------LPP 412
Query: 355 EEGPQPREEEVEPAPLIPAEATGDLLGLNEEVNPKAAELEESNALALAIVQ--PGND--- 409
E P + T DL+ L E+ + ++ N ALA+ PGN+
Sbjct: 413 PENYTPPPPPEPEPQPEKPQFTEDLVNLRED---EVTADDQGNKFALALFAGPPGNNGKW 469
Query: 410 -PLSSNRALK-------EISGSGWELALVTTPSNNNCQVVDSKLAGGFDKLLLDSLYEDD 461
SSN E + WELALV T SN Q + L GGFD LLL+ +Y+
Sbjct: 470 EAFSSNGVTSAWQNPAAEPGKADWELALVETTSNLEKQT--AALGGGFDNLLLNGMYDQG 527
Query: 462 SARRHIQLQNAGYGHAG--------------MAVPNP---FEHQQHDPFAVSNSIAPPTN 504
R+H+ G A +A+P P E DPFA S +I PP+
Sbjct: 528 MVRQHVSTSQLTGGSASSVALPLPGKTNNQVLALPAPDGTVEKVNQDPFAASLTIPPPSY 587
Query: 505 VQMALLAQQQ 514
VQMA + ++Q
Sbjct: 588 VQMAEMEKKQ 597
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 161/307 (52%), Gaps = 22/307 (7%)
Query: 7 FRKAYGALKDSTKVGLAKVNS----EFKDLDIAIVKATNHVECPPKERHVRKLFSATSVI 62
FR+ G KD +G A V + F D+++A+V+AT+H +CP ++ + ++ S
Sbjct: 9 FRQVLGLAKDHASIGRAIVQNYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEILFLVS-- 66
Query: 63 RPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHILQI 122
+ + +++RL+KTR+ +VA KTL++ HR LR G E+ L+ +H LQI
Sbjct: 67 NTPGSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLR-GSSRSIEQQLHIAHTSGHLQI 125
Query: 123 --SNFKDDSSPLAWDCSAWV--RTYALFLEERLECFRILRYDIESERLTKSSPGATKVHS 178
S F ++ D ++V + Y +L+ER+ I+ ++ +L G TK S
Sbjct: 126 GCSWFM-----MSLDSRSFVFLQNYVAYLQERVGW--IIN---QAGKLEPVMSGGTKF-S 174
Query: 179 RTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDG 238
R + + D + LP Q+ + +++ CSP A + LVQ A +LKESF++Y +DG
Sbjct: 175 RYKEKSMDLVFHILPKCQEFIAQVLKCSPVDAWPIDNLVQAATGNILKESFQVYMTYSDG 234
Query: 239 IINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPS 298
+ LV M FD+SR A + ++A QQ + L Y+ C+G ++ +P+++
Sbjct: 235 MTALVSMLFDLSRPARDLACGMLRKASQQIQDLRILYDKCRGFAGMKSLDYPSVQAISMD 294
Query: 299 FLATMEE 305
+ +EE
Sbjct: 295 HIVALEE 301
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 141/272 (51%), Gaps = 15/272 (5%)
Query: 36 IVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVI 95
+ KAT H PK++H+ L T+ + ++ +L +R + + +W+V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 96 HRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFR 155
H + G+ F + L + R + +SNF D S +D S ++R Y+ +L E+ +R
Sbjct: 83 HHLMVYGNERFIQYL---ASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 156 ILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNY 215
+ +D TK GA V R +N ++LL+ +P +Q + L+ + N
Sbjct: 140 QVAFD-----FTKVKRGADGVM---RTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNG 191
Query: 216 LVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFY 275
++ A L+ K++ +++ A N+GIINL++ +FDM ++ + L+IYK+ + +++F
Sbjct: 192 VINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFL 251
Query: 276 EYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ + + + R P L Q P S L +E+++
Sbjct: 252 KVAEQVGIDRG-DIPDLSQAPSSLLDALEQHL 282
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 141/272 (51%), Gaps = 15/272 (5%)
Query: 36 IVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVI 95
+ KAT H PK++H+ L T+ + ++ +L +R + + +W+V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 96 HRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFR 155
H + G+ F + L + R + +SNF D S +D S ++R Y+ +L E+ +R
Sbjct: 83 HHLMVYGNERFIQYL---ASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 156 ILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNY 215
+ +D TK GA V R +N ++LL+ +P +Q + L+ + N
Sbjct: 140 QVAFD-----FTKVKRGADGVM---RTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNG 191
Query: 216 LVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFY 275
++ A L+ K++ +++ A N+GIINL++ +FDM ++ + L+IYK+ + +++F
Sbjct: 192 VINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFL 251
Query: 276 EYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ + + + R P L Q P S L +E+++
Sbjct: 252 KVAEQVGIDRG-DIPDLSQAPSSLLDALEQHL 282
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 141/272 (51%), Gaps = 15/272 (5%)
Query: 36 IVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVI 95
+ KAT H PK++H+ L T+ + ++ +L +R + + +W+V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 96 HRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFR 155
H + G+ F + L + R + +SNF D S +D S ++R Y+ +L E+ +R
Sbjct: 83 HHLMVYGNERFIQYL---ASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 156 ILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNY 215
+ +D TK GA V R +N ++LL+ +P +Q + L+ + N
Sbjct: 140 QVAFD-----FTKVKRGADGVM---RTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNG 191
Query: 216 LVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFY 275
++ A L+ K++ +++ A N+GIINL++ +FDM ++ + L+IYK+ + +++F
Sbjct: 192 VINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFL 251
Query: 276 EYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ + + + R P L Q P S L +E+++
Sbjct: 252 KVAEQVGIDRG-DIPDLSQAPSSLLDALEQHL 282
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 135/274 (49%), Gaps = 15/274 (5%)
Query: 35 AIVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIV 94
A+ KAT H PK++H+ L AT+ ++ L +R + + +W+V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATN--ETNVNIPQMADTLFERATNS-SWVVVFKALVT 81
Query: 95 IHRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECF 154
H + G+ F + L + R + +SNF D S +D S ++R Y+ +L E+ +
Sbjct: 82 THHLMVHGNERFIQYL---ASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSY 138
Query: 155 RILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHN 214
R + +D R+ K + G R + ++LL+ +P LQ + L+ N
Sbjct: 139 RQMAFDFA--RVKKGADGVM------RTMAPEKLLKSMPILQGQIDALLEFDVHPNELTN 190
Query: 215 YLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADF 274
++ A L+ K+ K++ NDG+INL++ FF+M + AL IYKR + +++F
Sbjct: 191 GVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEF 250
Query: 275 YEYCKGLELARNFQFPTLRQPPPSFLATMEEYIR 308
+ + + + + P L Q P S + T+E+++
Sbjct: 251 LKVAEQVGIDKG-DIPDLTQAPSSLMETLEQHLN 283
>sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1
SV=1
Length = 901
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 15/273 (5%)
Query: 35 AIVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIV 94
A+ KAT H PK++H+ L AT+ ++ L +R + + +W+V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATN--ETNVNIPQMADTLFERATNS-SWVVVFKALVT 81
Query: 95 IHRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECF 154
H + G+ F + L + R + +SNF D S +D S ++R Y+ +L E+ +
Sbjct: 82 THHLMVHGNERFIQYL---ASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSY 138
Query: 155 RILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHN 214
R + +D R+ K + G R + ++LL+ +P LQ + L+ N
Sbjct: 139 RQMAFDFA--RVKKGADGVM------RTMVPEKLLKSMPILQGQIDALLEFDVHPNELTN 190
Query: 215 YLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADF 274
++ A L+ K+ K++ NDG+INL++ FF+M + AL IYKR + +++F
Sbjct: 191 GVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEF 250
Query: 275 YEYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ + + + + P L Q P S + T+E+++
Sbjct: 251 LKVAEQVGIDKG-DIPDLTQAPSSLMETLEQHL 282
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 15/273 (5%)
Query: 35 AIVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIV 94
A+ KAT H PK++H+ L AT+ ++ L +R + + +W+V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATN--ETNVNIPQMADTLFERATNS-SWVVVFKALVT 81
Query: 95 IHRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECF 154
H + G+ F + L + R + +SNF D S +D S ++R Y+ +L E+ +
Sbjct: 82 THHLMVHGNERFIQYL---ASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSY 138
Query: 155 RILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHN 214
R + +D R+ K + G R + ++LL+ +P LQ + L+ N
Sbjct: 139 RQMAFDFA--RVKKGADGVM------RTMVPEKLLKSMPILQGQIDALLEFDVHPNELTN 190
Query: 215 YLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADF 274
++ A L+ K+ K++ NDG+INL++ FF+M + AL IYKR + +++F
Sbjct: 191 GVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEF 250
Query: 275 YEYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ + + + P L Q P S + T+E+++
Sbjct: 251 LKVADEVGIDKG-DIPDLTQAPSSLMETLEQHL 282
>sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1
SV=1
Length = 649
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 17/275 (6%)
Query: 35 AIVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIV 94
A+ KAT PK +HV + AT+ + I AL +RL K ++W + KTLIV
Sbjct: 13 AVKKATKVKLAAPKYKHVEIILEATT--EDPETLENVIQALCERL-KEQSWTIVFKTLIV 69
Query: 95 IHRTLREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECF 154
H L+EG P ++ S R IL++ SS LA + + Y+ FL ER + +
Sbjct: 70 FHVMLKEGAPN--TTIVALSQRPRILEV---LKASSLLAQGKNIY--NYSRFLSERAKQY 122
Query: 155 RILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHN 214
L D + K +L N LL + +Q L RLI C N
Sbjct: 123 GRLGVD-----YAQVGDAPKKKIREMKLENG--LLRNVEGIQAQLRRLIKCQFVAEEIDN 175
Query: 215 YLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADF 274
+ A L++ + ++ A+N G+IN+++ +F+M HDA ++L IYK Q E + ++
Sbjct: 176 DIAITAFRLLVGDLLVLFKAVNIGVINVLEHYFEMGHHDAAQSLRIYKTFVNQTEDIINY 235
Query: 275 YEYCKGLELARNFQFPTLRQPPPSFLATMEEYIRE 309
+ LE F P ++ P S A++EEY+ +
Sbjct: 236 LSTARSLEFVTKFPVPNIKHAPISLTASLEEYLND 270
>sp|Q9VI75|PICA_DROME Phosphatidylinositol-binding clathrin assembly protein LAP
OS=Drosophila melanogaster GN=lap PE=1 SV=3
Length = 468
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 137/284 (48%), Gaps = 25/284 (8%)
Query: 35 AIVKATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIV 94
++ KAT PK++H+ L T+ P + + + L +R S+ NW+V K+LI
Sbjct: 27 SVCKATTEECIGPKKKHLDYLVHCTN--EPNVSIPHLANLLIER-SQNANWVVVYKSLIT 83
Query: 95 IHRTLREGDPTFREELLNYSHRGHILQISNFKDDSSP-----------LAWDCSAWVRTY 143
H + G+ F + L + +S+F D + + +D S ++R Y
Sbjct: 84 THHLMAYGNERFMQYL---ASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRY 140
Query: 144 ALFLEERLECFRILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLI 203
A +L E+ +R + +D K G K R +N ++LL+ LP LQ L L+
Sbjct: 141 AKYLNEKSLSYRAMAFD-----FCKVKRG--KEEGSLRSMNAEKLLKTLPVLQAQLDALL 193
Query: 204 GCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKR 263
+ N ++ + L+ ++ +++ NDGIINL++ +FDM++ A AL++YK+
Sbjct: 194 EFDCQSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKK 253
Query: 264 AGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ + + +F + + + + + P L + P S L +E+++
Sbjct: 254 FLVRMDRVGEFLKVAENVGIDKG-DIPDLTKAPSSLLDALEQHL 296
>sp|Q9XZI6|PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11
OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1
Length = 586
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 15/297 (5%)
Query: 12 GALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLFSATSVIRPRADVAYC 71
G S ++ AK + L I KAT PK++H+ L T+ P +
Sbjct: 17 GGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTN--EPNVSIPSM 74
Query: 72 IHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHILQISNFKDD-SS 130
+ L +R ++ NW V K LI IH + G+ F + L + + ++ F D
Sbjct: 75 ANLLIER-TQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNT---TFNLTAFVDKVGG 130
Query: 131 PLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHSRTRLLNCDELLE 190
+D S VR YA ++ E++ +R+ +D + + R ++ D+LL+
Sbjct: 131 AGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGRED-------GLLRTMHTDKLLK 183
Query: 191 QLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGIINLVDMFFDMS 250
+P LQ + L+ S + +N ++ + L+ ++ +++ NDGIIN+++ +FDM+
Sbjct: 184 TIPILQNQIDALLEFSVTTSELNNGVINCSFILLFRDLIRLFACYNDGIINVLEKYFDMN 243
Query: 251 RHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYI 307
+ AL+ YK + + +A+F + + + R + P L + P S L +E ++
Sbjct: 244 KKQCRDALDTYKSFLTRLDKVAEFLRVAESVGIDRG-EIPDLTRAPASLLEALEAHL 299
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 36/309 (11%)
Query: 36 IVKATNHVE-CPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIV 94
+VK ++ PPK+++V + S TS R ++ HAL RLS T W + K LIV
Sbjct: 8 LVKGATKIKMAPPKQKYVDPILSGTSSARGLQEIT---HALDIRLSDTA-WTIVYKALIV 63
Query: 95 IHRTLREG--DPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLE 152
+H +++G D T R +YSH + Q+ + + D A R Y +L+ R E
Sbjct: 64 LHLMIQQGEKDVTLR----HYSHNLDVFQLRKISHTTKWSSNDMRALQR-YDEYLKTRCE 118
Query: 153 CFRILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAY 212
+ L D + + + K+ S+ +L + DE L+ + +L+ + LI +
Sbjct: 119 EYGRLGMD-----HLRDNYSSLKLGSKNQL-SMDEELDHVESLEIQINALIRNKYSVSDL 172
Query: 213 HNYLVQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLA 272
N+L+ YA L++++ +Y A+N+G+I L++ FF++S A + L++YK E +
Sbjct: 173 ENHLLLYAFQLLVQDLLGLYNALNEGVITLLESFFELSIEHAKRTLDLYKDFVDMTEYVV 232
Query: 273 DFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYIREAPQSGTVQKRLEYHETVEEDDKP 332
+ + K + L + P ++ + ++EE++RE ET + +P
Sbjct: 233 RYLKIGKAVGL----KIPVIKHITTKLINSLEEHLRE--------------ETKRQRGEP 274
Query: 333 EEPVESEKP 341
EP + KP
Sbjct: 275 SEPQQDRKP 283
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 1 MGTFQSFRKAYGALKDS---TKVGLAKVNSEFKDLD--IAIVKATNHV-ECPPKERHVRK 54
MG SF G +KD +K L N++ K L +++++AT H PP RH+
Sbjct: 1 MGRITSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAV 60
Query: 55 LFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYS 114
+ SA + RA + + ++ +RL T + VA+K+LI+IH ++ G +++L +
Sbjct: 61 ILSAGT--GSRATASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFP 118
Query: 115 HRG--HILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPG 172
G + L++S F+D+ SPL W+ S+WVR YAL+LE L RI+ + I S T S+
Sbjct: 119 ASGGRNYLKLSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISS---TSSTIH 175
Query: 173 ATKVHSRTRLLNCDELLEQLPALQQLL 199
+ L +LL ++ AL LL
Sbjct: 176 KEEYEEMVSSLTNSDLLREIDALVGLL 202
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 34/310 (10%)
Query: 7 FRKAYGALKDSTK---VGLAKVNSEFK--DLDIAIVKATNHVECPPKERHVRKLFSATSV 61
+++A GALKD +G ++ S F+ DLD AI+ AT+H + + +++
Sbjct: 4 WKRASGALKDRKTLFTIGFSRKTS-FRNPDLDSAIIHATSHDDSSVDYHNAHRVYKW--- 59
Query: 62 IRPR-ADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHIL 120
IR A++ +HAL+ R+++TR+WIVA+K L+++H L + +E R
Sbjct: 60 IRSSPANLKPLVHALSSRVNRTRSWIVALKALMLVHGVLCCKVTSLQEI------RRLPF 113
Query: 121 QISNFKDDSS--PLAWDCSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHS 178
+S+F D S W +A++R Y FL++ + D R H
Sbjct: 114 DLSDFSDGHSRPSKTWGFNAFIRAYFSFLDQ----YSFFLSDQIRRR-----------HK 158
Query: 179 RTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDG 238
+ +L + ++ LE++ LQ LL L+ P L+ A+ V+ E F IY I
Sbjct: 159 KPQLDSVNQELERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYGRICSA 218
Query: 239 IIN-LVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQPPP 297
I L+ + + +AV AL I K+A Q E LA ++E+CK ++ P P
Sbjct: 219 IAKLLIKIHPAAGKAEAVIALKIVKKATSQGEDLALYFEFCKEFGVSNAHDIPKFVTIPE 278
Query: 298 SFLATMEEYI 307
+ +E+ I
Sbjct: 279 EDIKAIEKVI 288
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 145/312 (46%), Gaps = 34/312 (10%)
Query: 7 FRKAYGALKDSTK---VGLAKVNSEFK--DLDIAIVKATNHVECPPKERHVRKLFSATSV 61
+++A A+KD VG ++ NS ++ DL+ AI+KAT+H + + +++
Sbjct: 4 WKRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVYKW--- 60
Query: 62 IRPR-ADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHIL 120
IR ++ ++A++ R++ TR+WIVA+K+L+++H L P+ E R
Sbjct: 61 IRSSPLNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVLCCKVPSVVGEF-----RRLPF 115
Query: 121 QISNFKDDSSPLA--WDCSAWVRTYALFLEERLECF--RILRYDIESER-LTKSSPGATK 175
+S+F D S L+ W + +VRTY FL +I R + R L K+S
Sbjct: 116 DLSDFSDGHSCLSKTWGFNVFVRTYFAFLHHYSSFLSDQIHRLRGNNRRSLEKTSDSVI- 174
Query: 176 VHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAI 235
+ LE++ LQ LL ++ P L+ A+ ++ ES IY I
Sbjct: 175 -----------QELERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIESINIYGRI 223
Query: 236 NDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQP 295
++ ++ + + +A L I + Q E L ++E+CKG ++ + P +
Sbjct: 224 CGAVMKVLPL---AGKSEAATVLKIVNKTTSQGEDLIVYFEFCKGFGVSNAREIPQFVRI 280
Query: 296 PPSFLATMEEYI 307
P + +E+ I
Sbjct: 281 PEEEVEAIEKMI 292
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 14/273 (5%)
Query: 39 ATNHVECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRT 98
AT PPK++++ + TS D + L R++ T W + K+L+V+H
Sbjct: 11 ATKIKSAPPKQKYLDPILLGTS---NEEDFYEIVKGLDSRINDTA-WTIVYKSLLVVHLM 66
Query: 99 LREGDPTFREELLNYSHRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILR 158
+REG L YS I N + + + D A R Y +L+ R F ++
Sbjct: 67 IREGSKDV--ALRYYSRNLEFFDIENIRGSNGSASGDMRALDR-YDNYLKVRCREFGKIK 123
Query: 159 YDI--ESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYL 216
D + R K + G SR + + + L+ + +L+ + LI N L
Sbjct: 124 KDYVRDGYRTLKLNSGNYG-SSRNKQHSINIALDHVESLEVQIQALIKNKYTQYDLSNEL 182
Query: 217 VQYALALVLKESFKIYCAINDGIINLVDMFFDMSRHDAVKALNIYKRAGQQAESLADFYE 276
+ + L++++ +Y A+N+GII L++ FF++S H+A + L++YK E + + +
Sbjct: 183 IIFGFKLLIQDLLALYNALNEGIITLLESFFELSHHNAERTLDLYKTFVDLTEHVVRYLK 242
Query: 277 YCKGLELARNFQFPTLRQPPPSFLATMEEYIRE 309
K L + P ++ + ++EE++ E
Sbjct: 243 SGKTAGL----KIPVIKHITTKLVRSLEEHLIE 271
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 32 LDIAIVKATNH----VECPPKERHVRKLFSATSVIRPRADVAYCIHALAKRLSKTRNWIV 87
L A+VKAT+H ++ + R + S+ S ++P + ++ R+ +TR+W V
Sbjct: 24 LTAAVVKATSHDELSIDTESAQFIYRHVLSSPSSLKP------LVSLISSRVKRTRSWAV 77
Query: 88 AIKTLIVIHRTLREGDPTFREELLNYSHRGHI-LQISNFKDDSSPLAWDCSAW---VRTY 143
A+K L+++H T E + G + +S+F + +S + + VR Y
Sbjct: 78 ALKGLMLMHGFFL-CKSTVAESI------GRLPFDLSSFGEGNSRIMSKSGGFNLFVRAY 130
Query: 144 ALFLEERLECFRILRYDIESERLTKSSPGATKVHSRTRLLNCDELLEQLPALQQLLFRLI 203
FL+ R IL +D R + S + L + +Q ++ LI
Sbjct: 131 FAFLDRR----SILFHDGNRHRYNEESSVLIR-------------LVIIRKMQIIVDSLI 173
Query: 204 GCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGIINLV-DMFFDMSRHDAVKALNIYK 262
P G ++ A+ V+ E +IY I I ++ ++ + + +A AL I
Sbjct: 174 RIKPIGENMMIPVINEAMENVVSEIMEIYGWICRRIAEVLPNVHSKIGKTEADLALKIVA 233
Query: 263 RAGQQAESLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYIREAPQS 313
++ +Q L ++E+CK L ++ + P + P + + ++E +R A +S
Sbjct: 234 KSMKQGGELKKYFEFCKDLGVSNAQEIPNFVRIPEADVIHLDELVRTAMES 284
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 58/317 (18%)
Query: 7 FRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKLF----SATSVI 62
+R+ GA+KD K+ L E A++KAT+H + +V+ ++ S S
Sbjct: 8 WRRVSGAIKD--KLSLITATDE--KFTAAVIKATSHNDVSMDIENVQFIYRYIQSNPSSF 63
Query: 63 RPRADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHI-LQ 121
+P I A++ R+ TRNW VA+K L+++H G ++ G +
Sbjct: 64 KP------IIRAVSLRVEHTRNWTVALKCLMLLHGLFFSG-------IMTVDSIGRLPFD 110
Query: 122 ISNFKDDSSPLAWD--CSAWVRTYALFLEERLECFRILRYDIESERLTKSSPGATKVHSR 179
+S F S + + +VR Y +FL+ER IL Y+ R
Sbjct: 111 LSGFGRRKSRFSRTGRFNIFVRAYFMFLDER----SILYYNKNMIR-------------- 152
Query: 180 TRLLNCDELLEQLPALQQLLFRLIGCSPEGAAYHNYLVQYALALVLKESFKIYCAINDGI 239
LE + +Q+++ L+ P G LV A+ V+ E I I G
Sbjct: 153 ---------LEIIVKMQRIVDSLMRIKPIG---ETPLVIEAMEYVISEVVLINGHICRGF 200
Query: 240 IN-LVDM---FFDMSRHDAVKALNIYKRAGQQAESLADFYEYCKGLELARNFQFPTLRQP 295
L D+ ++S +A A+NI ++ Q E L ++E+C+G + + + +
Sbjct: 201 AGFLSDVQSNMLEISSAEADLAMNIVAKSLSQREKLFKYFEFCRGFGVTNAQETSNILRI 260
Query: 296 PPSFLATMEEYIREAPQ 312
S + +++ + AP+
Sbjct: 261 TESQMIVLDKLLHIAPE 277
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 12 GALKDSTKVGLAKVNSEF-----KDLDIAIVKATNHV-ECPPKERHVRKLFS-ATSVIRP 64
G KD +G A++ F K + +A++K+T PP +V + S + S P
Sbjct: 10 GKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVISYSNSRYAP 69
Query: 65 RADVAYCIHALAKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSHRGHILQISN 124
A A RL T+N IVA K+LIVIH+ ++ R++ H + L+++
Sbjct: 70 AA-----FSAALWRLRVTKNAIVATKSLIVIHKLIKSS----RDKFEGLGHGRNNLKLNE 120
Query: 125 FKDDSSPLAWDCSAWVRTYALFLE 148
F D SS L + S W+R Y +L+
Sbjct: 121 FSDKSSNLTLELSQWIRWYGQYLD 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,631,741
Number of Sequences: 539616
Number of extensions: 10027427
Number of successful extensions: 97890
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 644
Number of HSP's that attempted gapping in prelim test: 50467
Number of HSP's gapped (non-prelim): 18467
length of query: 590
length of database: 191,569,459
effective HSP length: 123
effective length of query: 467
effective length of database: 125,196,691
effective search space: 58466854697
effective search space used: 58466854697
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)