BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040261
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 202/340 (59%), Gaps = 7/340 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M+R P P V F+ F +A+ K ++ VL K+L G+ ++YT NI+INCF
Sbjct: 75 LFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ + + VLG++++ + PD TF +LIKGL E ++ EA L ++ GC+PDV
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY +++NG+CR+G T +AL+L +M N K D TYSTI D LC++G +D A
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAA 247
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
LF +M+ + I VVTY SL+RG C A WN+ L +M+ + + PNV+TFNV+++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
K GK+ EA+ L + MI G+ P+ YNTLMDG+C+ R++ A + M N C D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+ ++ LI GYC K ++ + ++ + +G+ VTY+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 162/297 (54%), Gaps = 6/297 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +FN+L K L+K + + G+ P++ TYN L++ +C R+S +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++R+ +PD VTFTSLIKG C R+ + +F + G + TY+ L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+G +A LF+EM + GV+ PD +TY + DGLC G ++KA E+F ++ +
Sbjct: 416 SGKIKLAEELFQEMVS----HGVL--PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ +V YT++I G C +A LF + +GV+PNV+T+ V+++ LCK G + EA+
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
LL M + G P+ YNTL+ G + + +L M+S G D S ++I+
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 174 bits (441), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 174/342 (50%), Gaps = 8/342 (2%)
Query: 4 FDYMLRMHPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
D + +M V +++ + L ++ D +SLFK + + G+ + TYN L+
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G+ + G ++L ++ P+ +TF L+ E ++ EA L+ ++ G P+
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDK 181
+ TY TL++G C A N+ + M C PD +T++++ G C VD
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNK------CSPDIVTFTSLIKGYCMVKRVDD 386
Query: 182 AKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMN 241
++F + + + VTY+ L++GFC + A+ LF EM+ GV P+V+T+ ++++
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 242 ELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMR 301
LC NGK+++A + E + + + +Y T+++G C G+V A LF S+ G
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 302 DVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+V +Y ++I+G CK + A L +M G P TYNT
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 6/319 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
V ++N L L K ++ L K + S + P++ T+N+L++ F K G++ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++ +P+ +T+ +L+ G C ++R+ EA + + C PD+ T+T+LI G C
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ +F ++ + G+V +A+TYS + G C+ G + A+ELF +M +
Sbjct: 381 VKRVDDGMKVFRNIS----KRGLV--ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PDV+TY L+ G C +A +F ++ + +V + I+ +CK GK+++A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L + GV+P+ Y ++ G C G ++ A L ME +G + +Y LI +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 315 KNKEIEGALSLYSEMLSKG 333
++ ++ + L EM S G
Sbjct: 555 RDGDLTASAKLIEEMKSCG 573
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 237 NVIMNELCKNG----KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFV 292
NV E ++G K D+A L + MI+ P ++ T + N +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 293 SMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+E NG ++++ I+IN +C+ + A S+ +++ G P T+NT
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 163
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 209/376 (55%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P V FN LF +AK K Y+ VL+L K++ S G+ +YT +I+INCF
Sbjct: 75 LFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S F +G+I++ + PD V F +L+ GLC E R+ EA L ++ G KP +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 123 FTYTTLINGL-----------------------------------CRTGHTIVALNLFEE 147
T TL+NGL C++G T +A+ L +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M N K DA+ YS I DGLCK+G +D A LF +M+ + D++TY +LI G
Sbjct: 254 MEERN------IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
FC A W++ L +M+ + + PNVVTF+V+++ K GK+ EA +LL+ M+Q G+ P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
YN+L+DGFC R+ A ++ M S GC D+ ++ ILINGYCK I+ L L+
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTYNT
Sbjct: 428 EMSLRGVIANTVTYNT 443
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 7/327 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+ D M+ M P + + N L L N + L R+ G P+ TY ++N
Sbjct: 180 LVDRMVEMGHKPTLI-TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK G+ + +L ++ DAV ++ +I GLC + + A LF ++ G K D+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY TLI G C G L +M P+ +T+S + D KEG + +A
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRK------ISPNVVTFSVLIDSFVKEGKLREA 352
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
+L +M I P+ +TY SLI GFC N EA + M+ +G P+++TFN+++N
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
CK ++D+ L M GV + YNTL+ GFC +G++ AK+LF M S D
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEM 329
+ SY IL++G C N E+E AL ++ ++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 169/323 (52%), Gaps = 6/323 (1%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 79
++I+ L K+ D +LF + G D+ TYN LI FC GR G +L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 80 RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTI 139
+ +P+ VTF+ LI E ++ EA L ++ G P+ TY +LI+G C+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 140 VALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVV 199
A+ + + M + C PD +T++ + +G CK +D ELF +M + + V
Sbjct: 386 EAIQMVDLMISKG------CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 200 TYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELM 259
TY +L++GFC + AK LF EM+ + V+P++V++ ++++ LC NG++++A + +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 260 IQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEI 319
+ + D +Y ++ G C +V+ A +LF S+ G D +Y I+I+ C+ +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 320 EGALSLYSEMLSKGIRPTVVTYN 342
A L+ +M +G P +TYN
Sbjct: 560 SKADILFRKMTEEGHAPDELTYN 582
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 164/324 (50%), Gaps = 6/324 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
+ ++N L G +D L + + + P++ T+++LI+ F K G++ +L
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
+++ P+ +T+ SLI G C E+R+ EA + + + GC PD+ T+ LING C+
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
L LF EM+ GV+ + +TY+T+ G C+ G ++ AK+LF +M + P
Sbjct: 418 RIDDGLELFREMSLR----GVI--ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
D+V+Y L+ G C + +A +F ++ ++ ++ + +I++ +C K+D+A L
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
+ GV+ DA YN ++ C +++A LF M G D +Y ILI + +
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 317 KEIEGALSLYSEMLSKGIRPTVVT 340
+ A L EM S G V T
Sbjct: 592 DDATTAAELIEEMKSSGFPADVST 615
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +F++L K L K + G+ P+ TYN LI+ FCK R+ +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ ++ PD +TF LI G C +RI + LF ++ G + TY TL+ G C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+G VA LF+EM + +PD ++Y + DGLC G ++KA E+F K++ +
Sbjct: 451 SGKLEVAKKLFQEMVSRR------VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
D+ Y +I G C A+ ++A LF + +GV+ + +N++++ELC+ + +A
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
L M + G PD YN L+ A EL M+S+G DV + ++IN
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 30/268 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
P ++N L K + + + + S G PD+ T+NILIN +CK R+ G
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + + VT+ +L++G C ++ A LF ++ + +PD+ +Y L++GLC
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 134 RTGHTIVALNLFEEMANGNGEFGV---------VC--------------------KPDAI 164
G AL +F ++ E + +C K DA
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 165 TYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEM 224
Y+ + LC++ + KA LF KM +E PD +TY LIR +D A L EM
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 225 MDQGVQPNVVTFNVIMNELCKNGKMDEA 252
G +V T +++N L +G++D++
Sbjct: 605 KSSGFPADVSTVKMVINML-SSGELDKS 631
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
D A +LF M P V+ + L + L +M +G+ ++ T ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 239 IMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
++N C+ K+ A + ++++G PD ++NTL++G CL RV+ A EL M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 299 CMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+ + L+NG C N ++ A+ L M+ G +P VTY
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
K D+A L MIQ P +N L T + L MES G +++
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I+IN +C+ +++ A S +++ G P V +NT
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNT 163
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 209/376 (55%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + FN L +AK +D V+SL +R+ ++ + DLY+YNILINCF
Sbjct: 67 LFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRI------------------- 103
C+ ++ VLG++++ + PD VT +SL+ G C RI
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 104 ----------------MEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEE 147
EA AL ++ A GC+PD+FTY T++NGLC+ G +AL+L ++
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M G E D + Y+TI D LC V+ A LF +M ++ I P+VVTY SLIR
Sbjct: 246 MEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PNVVTF+ +++ K GK+ EA +L + MI+ + PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
Y++L++GFC+ R++ AK +F M S C +V +Y LI G+CK K +E + L+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTYNT
Sbjct: 420 EMSQRGLVGNTVTYNT 435
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 181/327 (55%), Gaps = 6/327 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V + + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ P+ VTF++LI E +++EA L+ ++ PD+FTY++LING C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A ++FE M + + C P+ +TY+T+ G CK V++ ELF +M +
Sbjct: 375 RLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ VTY +LI+G A D + A+ +F +M+ GV P+++T++++++ LCK GK+++A +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
E + + + PD YN +++G C G+V +LF S+ G +V Y +I+G+C+
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
E A +L+ EM G P TYNT
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNT 575
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 30/371 (8%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M M P V ++ G NK + V +L R+ + G PDL+TY ++N
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNG 229
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G + +L ++ + D V +T++I LC + +A LFT++ G +P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---------------------- 159
V TY +LI LC G A L +M VV
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 160 -------KPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAN 212
PD TYS++ +G C +D+AK +F M ++ P+VVTY +LI+GFC A
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 213 DWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYN 272
E LF EM +G+ N VT+N ++ L + G D A ++ + M+ GV PD Y+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 273 TLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK 332
L+DG C G++ +A +F ++ + D+++Y I+I G CK ++E L+ + K
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 333 GIRPTVVTYNT 343
G++P V+ Y T
Sbjct: 530 GVKPNVIIYTT 540
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 159/318 (50%), Gaps = 12/318 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +F+ L K L+ + + PD++TY+ LIN FC R+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 75 LGRIL-RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
++ + CF P+ VT+ +LIKG C R+ E LF ++ G + TY TLI GL
Sbjct: 383 FELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDEN 193
+ G +A +F++M + GV PD ITYS + DGLCK G ++KA +F ++
Sbjct: 442 QAGDCDMAQKIFKKMVSD----GV--PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEAS 253
+ PD+ TY +I G C A + LF + +GV+PNV+ + +++ C+ G +EA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGY 313
L M + G P++ YNTL+ G + EL M S G + D + ++IN
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-M 614
Query: 314 CKNKEIEGALSLYSEMLS 331
+ +E + Y EMLS
Sbjct: 615 LHDGRLEKS---YLEMLS 629
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 11/283 (3%)
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTF-TSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
F ++ + SP F + G F+ + + L + + + ++ +A LF ++ P
Sbjct: 23 FAQLRKASPLFSLRG----VYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLP 78
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
+ + L++ + + + ++L E M N + D +Y+ + + C+ +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLYSYNILINCFCRRSQLP 132
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
A + KM PD+VT +SL+ G+C+ +EA L +M QPN VTFN ++
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
+ L + K EA L++ M+ G +PD Y T+++G C G ++ A L ME
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
DV Y +I+ C K + AL+L++EM +KGIRP VVTYN+
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
PP + +++IL L K + L +F+ L + PD+YTYNI+I CK G+V G+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + P+ + +T++I G C + EA ALF +++ G P+ TY TLI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 134 RTGHTIVALNLFEEM 148
R G + L +EM
Sbjct: 582 RDGDKAASAELIKEM 596
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 208/376 (55%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + F+ L +AK K +D V+S +++ +G+ +LYTYNI+INC
Sbjct: 52 LFGEMVKSRPFPS-IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 63 CKMGRVSPGFVVLGRILR-----------------------------------SCFTPDA 87
C+ ++S +LG++++ + PD
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEE 147
VTFT+L+ GL ++ EA AL ++ GC+PD+ TY +INGLC+ G +ALNL +
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M G E D + YST+ D LCK VD A LF +M ++ I PDV TY+SLI
Sbjct: 231 MEKGKIE------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PNVVTFN +++ K GK+ EA +L + MIQ + P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
YN+L++GFC+ R++ A+++F M S C+ DV +Y LING+CK K++ + L+
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 328 EMLSKGIRPTVVTYNT 343
+M +G+ VTY T
Sbjct: 405 DMSRRGLVGNTVTYTT 420
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 180/327 (55%), Gaps = 6/327 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V ++ + L K +H D L+LF +++ G+ PD++TY+ LI+C C GR S +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
+L P+ VTF SLI E +++EA LF ++ P++ TY +LING C
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A +F M + + C PD +TY+T+ +G CK V ELF M +
Sbjct: 360 RLDEAQQIFTLMVSKD------CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ VTYT+LI GF A+D + A+ +F +M+ GV PN++T+N +++ LCKNGK+++A +
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
E + + + PD YN + +G C G+V +LF S+ G DV +Y +I+G+CK
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
E A +L+ +M G P TYNT
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
+EA LF EM+ P++V F+ +++ + K K D E M +GV + YN +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
++ C +++ A + M G + + L+NG+C I A++L +M+ G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 335 RPTVVTYNT 343
+P VT+ T
Sbjct: 167 QPDTVTFTT 175
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 203 SLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG----KMDEASRLLEL 258
SL + F + + + CL +G+ + ++++ +L +N K+DEA L
Sbjct: 2 SLAKRFVHLRKASPSFCL------RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGE 55
Query: 259 MIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
M++ P ++ L+ + + ME G ++++Y I+IN C+ +
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 319 IEGALSLYSEMLSKGIRPTVVTYNT 343
+ AL++ +M+ G P++VT N+
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNS 140
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 207/368 (56%), Gaps = 38/368 (10%)
Query: 10 MHPSP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRV 68
+H P P V F+ LF +AK K YD VL+L K++ G+ +LYT +I+INCFC+ ++
Sbjct: 80 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139
Query: 69 SPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTL 128
F +G+I++ + P+ +TF++LI GLC E R+ EA L ++ G KPD+ T TL
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 129 INGLCRTGHTIVALNLFEEMANGNGEFG-------------VVCKP-------------- 161
+NGLC +G A+ L ++M E+G V+CK
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMV----EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 162 ------DAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWN 215
DA+ YS I DGLCK G +D A LF +M+ + I +++TY LI GFC A W+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 216 EAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLM 275
+ L +M+ + + PNVVTF+V+++ K GK+ EA L + MI G+ PD Y +L+
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 276 DGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIR 335
DGFC +++A ++ M S GC ++ ++ ILINGYCK I+ L L+ +M +G+
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 336 PTVVTYNT 343
VTYNT
Sbjct: 436 ADTVTYNT 443
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 168/324 (51%), Gaps = 6/324 (1%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 78
++I+ L K+ D +LF + G+ ++ TYNILI FC GR G +L +
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 79 LRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHT 138
++ P+ VTF+ LI E ++ EA L ++ G PD TYT+LI+G C+ H
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 139 IVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDV 198
A + + M + C P+ T++ + +G CK +D ELF KM + D
Sbjct: 385 DKANQMVDLMVSKG------CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLEL 258
VTY +LI+GFC N AK LF EM+ + V PN+VT+ ++++ LC NG+ ++A + E
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 259 MIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
+ + + D +YN ++ G C +V+ A +LF S+ G V +Y I+I G CK
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 319 IEGALSLYSEMLSKGIRPTVVTYN 342
+ A L+ +M G P TYN
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYN 582
Score = 168 bits (425), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 164/328 (50%), Gaps = 6/328 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++ + + K+ + L +++ + D Y+I+I+ CK G + F +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ T + +T+ LI G C R + A L + P+V T++ LI+ +
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A L +EM + G+ PD ITY+++ DG CKE +DKA ++ M +
Sbjct: 346 EGKLREAEELHKEMIHR----GIA--PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+P++ T+ LI G+C AN ++ LF +M +GV + VT+N ++ C+ GK++ A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L + M+ V P+ Y L+DG C G +A E+F +E + D+ Y I+I+G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+++ A L+ + KG++P V TYN
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 171/329 (51%), Gaps = 7/329 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
F +F+ M M + ++NIL G +D L + + + P++ T+++LI+
Sbjct: 283 FNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
F K G++ + ++ PD +T+TSLI G C E+ + +A + + + GC P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
++ T+ LING C+ L LF +M+ GVV D +TY+T+ G C+ G ++
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMS----LRGVV--ADTVTYNTLIQGFCELGKLN 455
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
AKELF +M + P++VTY L+ G C + +A +F ++ ++ ++ +N+I+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
+ +C K+D+A L + GV+P YN ++ G C G ++ A+ LF ME +G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEM 329
D ++Y ILI + + + ++ L E+
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 6/297 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +F++L K L K + G+ PD TY LI+ FCK + +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ ++ P+ TF LI G C +RI + LF K+ G D TY TLI G C
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G VA LF+EM + P+ +TY + DGLC G +KA E+F K++ +
Sbjct: 451 LGKLNVAKELFQEMVSRK------VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
D+ Y +I G C A+ ++A LF + +GV+P V T+N+++ LCK G + EA
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
L M + G PD YN L+ G ++ +L ++ G D + ++I+
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 30/267 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++ L K H D + + S G P++ T+NILIN +CK R+ G +
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++ D VT+ +LI+G C ++ A LF ++ + P++ TY L++GLC
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 135 TGHTIVALNLFEEMANGNGEFGV---------VC--------------------KPDAIT 165
G + AL +FE++ E + +C KP T
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y+ + GLCK+G + +A+ LF KM+++ PD TY LIR D ++ L E+
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEA 252
G + T ++++ L +G++ ++
Sbjct: 606 RCGFSVDASTIKMVIDML-SDGRLKKS 631
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
D A +LF M P V+ ++ L ++ L +M +G+ N+ T ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 239 IMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
++N C+ K+ A + +I++G P+ ++TL++G CL GRV+ A EL M G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 299 CMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
D+ + L+NG C + + A+ L +M+ G +P VTY
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
PP + ++ IL L N + L +F+++ + D+ YNI+I+ C +V +
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + P T+ +I GLC + + EA LF K+ G PD +TY LI
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
G ++ L EE+ F V + ++DG K+ F+D
Sbjct: 590 GDGDATKSVKLIEELKRCG--FSVDASTIKMVIDMLSDGRLKKSFLD 634
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
K D+A L MI P ++ L T + + L ME G ++++
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I+IN +C+ +++ A S +++ G P +T++T
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 163
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 253 bits (646), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 204/376 (54%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F+ M++ P P P+ FN L +A+ K YD VL K + G+ D+YT I+INC+
Sbjct: 57 LFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++ F VLGR + + PD +TF++L+ G C E R+ EA AL ++ +PD+
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 123 FTYTTLINGLC-----------------------------------RTGHTIVALNLFEE 147
T +TLINGLC ++G++ +AL+LF +
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M N K + YS + D LCK+G D A LF +M+ + I DVVTY+SLI G
Sbjct: 236 MEERN------IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++ + EM+ + + P+VVTF+ +++ K GK+ EA L MI G+ PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
YN+L+DGFC ++ A ++F M S GC D+ +Y ILIN YCK K ++ + L+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 328 EMLSKGIRPTVVTYNT 343
E+ SKG+ P +TYNT
Sbjct: 410 EISSKGLIPNTITYNT 425
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 173/326 (53%), Gaps = 6/326 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V ++I+ L K+ +D LSLF + G+ D+ TY+ LI C G+ G +L
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ PD VTF++LI E +++EA L+ ++ G PD TY +LI+G C+
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A +F+ M + C+PD +TYS + + CK VD LF ++ + + P
Sbjct: 365 CLHEANQMFDLMVSKG------CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ +TY +L+ GFC + N AK LF EM+ +GV P+VVT+ ++++ LC NG++++A +
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
E M + + +YN ++ G C +V+ A LF S+ G DV +Y ++I G CK
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYN 342
+ A L+ +M G P TYN
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYN 564
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++N L K +F + S G PD+ TY+ILIN +CK RV G +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
I P+ +T+ +L+ G C ++ A LF ++ + G P V TY L++GLC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G AL +FE+M G+ Y+ I G+C VD A LF + D+ +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIG------IYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PDVVTY +I G C +EA LF +M + G P+ T+N+++ + +
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 255 LLELMIQIGVRPDASVYNTLMD 276
L+E M G D+S ++D
Sbjct: 582 LIEEMKVCGFSADSSTIKMVID 603
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
PP V ++ IL L N + L +F+++ + + YNI+I+ C +V +
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + PD VT+ +I GLC + + EA LF K++ GC PD FTY LI
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Query: 134 RTGHTIVALNLFEEM 148
I ++ L EEM
Sbjct: 572 GGSGLISSVELIEEM 586
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 35/178 (19%)
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQ------------------------------- 227
++Y +R N+A LF M+
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 228 ----GVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGR 283
G++ ++ T +++N C+ K+ A +L ++G PD ++TL++GFCL GR
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 284 VNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
V+ A L M D+ + LING C + AL L M+ G +P VTY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 79
+NI+ + D SLF L+ G+ PD+ TYN++I CK G +S ++ ++
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 80 RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGL 132
TPD T+ LI+ S ++ + L +++ G D T +I+ L
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Query: 215 NEAKCLFIEMMDQGVQ----PNVVTFNVIMNELCKNG----KMDEASRLLELMIQIGVRP 266
N F +++++G ++ + E +NG K+++A L E MIQ P
Sbjct: 9 NRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP 68
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLY 326
+N L T + + ME NG D+++ I+IN YC+ K++ A S+
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 327 SEMLSKGIRPTVVTYNT 343
G P +T++T
Sbjct: 129 GRAWKLGYEPDTITFST 145
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 206/376 (54%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + FN L +AK ++ V+SL +++ ++G+ DLYTY+I INCF
Sbjct: 70 LFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S VL ++++ + PD VT +SL+ G C RI +A AL ++ G KPD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD-- 180
FT+TTLI+GL A+ L ++M C+PD +TY T+ +GLCK G +D
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 181 ---------------------------------KAKELFLKMKDENINPDVVTYTSLIRG 207
A +LF +M+ + I P+VVTY SLI
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L M+++ + PNVVTFN +++ K GK+ EA +L E MIQ + PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
YN L++GFC+ R++ AK++F M S C+ ++ +Y LING+CK K +E + L+
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTY T
Sbjct: 423 EMSQRGLVGNTVTYTT 438
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 173/327 (52%), Gaps = 9/327 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V FN + L K +H + + LF + + G+ P++ TYN LINC C GR S +L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
+L P+ VTF +LI E +++EA L ++ PD TY LING C
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A +F+ M + + C P+ TY+T+ +G CK V+ ELF +M +
Sbjct: 378 RLDEAKQMFKFMVSKD------CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ VTYT++I+GF A D + A+ +F +M+ V +++T++++++ LC GK+D A +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
+ + + + + +YNT+++G C G+V A +LF S+ DV +Y +I+G C
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSK 548
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ ++ A L+ +M G P TYNT
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNT 575
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 165/371 (44%), Gaps = 33/371 (8%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M+ M P ++ G NK + V +L ++ G PDL TY ++N
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G + +L ++ + + V F ++I LC + A LFT++ G +P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---------------------- 159
V TY +LIN LC G A L M VV
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 160 -------KPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAN 212
PD ITY+ + +G C +D+AK++F M ++ P++ TY +LI GFC
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 213 DWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYN 272
+ LF EM +G+ N VT+ I+ + G D A + + M+ V D Y+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 273 TLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK 332
L+ G C G+++ A +F ++ + ++F Y +I G CK ++ A L+ +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL--- 529
Query: 333 GIRPTVVTYNT 343
I+P VVTYNT
Sbjct: 530 SIKPDVVTYNT 540
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 6/287 (2%)
Query: 57 ILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAF 116
IL N + +V + G +++S P V F L+ + ++ +L +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 117 GCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKE 176
G D++TY+ IN CR +AL + +M E PD +T S++ +G C
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLSSLLNGYCHS 166
Query: 177 GFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTF 236
+ A L +M + PD T+T+LI G N +EA L +M+ +G QP++VT+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 237 NVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMES 296
++N LCK G +D A LL M ++ + ++NT++D C V A +LF ME+
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 297 NGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
G +V +Y LIN C A L S ML K I P VVT+N
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 13/267 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++N+L + D +FK + S P++ TYN LIN FCK RV G +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + + VT+T++I+G A +F ++ + D+ TY+ L++GLC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G AL +F+ + E + Y+T+ +G+CK G V +A +LF + +I
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNI------FIYNTMIEGMCKAGKVGEAWDLFCSL---SI 531
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PDVVTY ++I G C EA LF +M + G PN T+N ++ ++ ++
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 255 LLELMIQIGVRPDAS----VYNTLMDG 277
L++ M G DAS V N L DG
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDG 618
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
P + +++IL L DT L +FK L + +++ YN +I CK G+V +
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + PD VT+ ++I GLC++ + EA LF K++ G P+ TY TLI
Sbjct: 525 LFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKM 189
R + L +EM +G G DA T S +T+ L +G +DK+ FL M
Sbjct: 582 RDCDRAASAELIKEM-RSSGFVG-----DASTISLVTNML-HDGRLDKS---FLNM 627
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 182 AKELFLKMKDENIN--PDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
AK LF+ + I P V ++ +L C+ + A + E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
N L K+D+A L M++ P +N L+ + L M++ G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
D+++Y I IN +C+ ++ AL++ ++M+ G P +VT ++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 252 bits (643), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 204/370 (55%), Gaps = 30/370 (8%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M R P P + F+ LF +A+ K YD VL L K++ G+ +LYT +I+INC
Sbjct: 59 LFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S F +G+I++ + PD VTF++LI GLC E R+ EA L ++ G KP +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGE---------FGVVCKP------------ 161
T L+NGLC G A+ L + M + V+CK
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 162 --------DAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAND 213
DA+ YS I DGLCK+G +D A LF +M+ + D++ YT+LIRGFCYA
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 214 WNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNT 273
W++ L +M+ + + P+VV F+ +++ K GK+ EA L + MIQ G+ PD Y +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 274 LMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKG 333
L+DGFC ++++A + M S GC ++ ++ ILINGYCK I+ L L+ +M +G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 334 IRPTVVTYNT 343
+ VTYNT
Sbjct: 418 VVADTVTYNT 427
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 170/357 (47%), Gaps = 29/357 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P +F+ L L L L R+ +G P L T N L+N C G+VS ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ R++ + F P+ VT+ ++K +C + A L K+ K D Y+ +I+GLC+
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 135 TGHTIVALNLFEEMA--------------------NGNGEFGVV---------CKPDAIT 165
G A NLF EM G + G PD +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
+S + D KEG + +A+EL +M I+PD VTYTSLI GFC N ++A + M+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVN 285
+G PN+ TFN+++N CK +D+ L M GV D YNTL+ GFC G++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 286 RAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
AKELF M S D+ SY IL++G C N E E AL ++ ++ + + YN
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 166/324 (51%), Gaps = 6/324 (1%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 78
++I+ L K+ D +LF + G D+ Y LI FC GR G +L +
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 79 LRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHT 138
++ TPD V F++LI E ++ EA L ++ G PD TYT+LI+G C+
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 139 IVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDV 198
A ++ + M + C P+ T++ + +G CK +D ELF KM + D
Sbjct: 369 DKANHMLDLMVSKG------CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLEL 258
VTY +LI+GFC AK LF EM+ + V+P++V++ ++++ LC NG+ ++A + E
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 259 MIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
+ + + D +YN ++ G C +V+ A +LF S+ G DV +Y I+I G CK
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 319 IEGALSLYSEMLSKGIRPTVVTYN 342
+ A L+ +M G P TYN
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYN 566
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 157/298 (52%), Gaps = 6/298 (2%)
Query: 32 HYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFT 91
+D L + + + PD+ ++ LI+CF K G++ + +++ +PD VT+T
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 92 SLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANG 151
SLI G C E+++ +A + + + GC P++ T+ LING C+ L LF +M+
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS-- 414
Query: 152 NGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYA 211
GVV D +TY+T+ G C+ G ++ AKELF +M + PD+V+Y L+ G C
Sbjct: 415 --LRGVV--ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 212 NDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVY 271
+ +A +F ++ ++ ++ +N+I++ +C K+D+A L + GV+PD Y
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 272 NTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEM 329
N ++ G C G ++ A LF ME +G + +Y ILI + + + L E+
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 6/297 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +F+ L C K L K + G+ PD TY LI+ FCK ++ +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ P+ TF LI G C + I + LF K+ G D TY TLI G C
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G VA LF+EM + +PD ++Y + DGLC G +KA E+F K++ +
Sbjct: 435 LGKLEVAKELFQEMVSRR------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
D+ Y +I G C A+ ++A LF + +GV+P+V T+N+++ LCK G + EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
L M + G P+ YN L+ G ++ +L ++ G D + ++++
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 30/267 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++ L K D + + S G P++ T+NILIN +CK + G +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++ D VT+ +LI+G C ++ A LF ++ + +PD+ +Y L++GLC
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 135 TGHTIVALNLFEEMANGNGEFGV---------VC--------------------KPDAIT 165
G AL +FE++ E + +C KPD T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y+ + GLCK+G + +A LF KM+++ +P+ TY LIR D ++ L E+
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEA 252
G + T ++++ L +G++ ++
Sbjct: 590 RCGFSVDASTVKMVVDML-SDGRLKKS 615
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 166 YSTITDGLCK--------EGFVD----KAKELFLKMKDENINPDVVTYTSLIRGFCYAND 213
+S+++DG K G VD A +LF +M P ++ ++ L
Sbjct: 28 FSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQ 87
Query: 214 WNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNT 273
++ L +M +G+ N+ T ++++N C+ K+ A + +I++G PD ++T
Sbjct: 88 YDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFST 147
Query: 274 LMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKG 333
L++G CL GRV+ A EL M G + + L+NG C N ++ A+ L M+ G
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 334 IRPTVVTY 341
+P VTY
Sbjct: 208 FQPNEVTY 215
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
K D+A L + M + RP ++ L T + + +L ME G ++++
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I+IN C+ +++ A S +++ G P VT++T
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFST 147
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 207/376 (55%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + FN L +AK ++ V+SL +++ ++G+ DLYTY+I INCF
Sbjct: 70 LFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S VL ++++ + PD VT +SL+ G C RI +A AL ++ G KPD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 123 FTYTTLI-----------------------------------NGLCRTGHTIVALNLFEE 147
FT+TTLI NGLC+ G +AL+L ++
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M G E D + Y+TI DGLCK +D A LF +M ++ I PDV TY+SLI
Sbjct: 249 MEKGKIE------ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PNVVTF+ +++ K GK+ EA +L + MI+ + PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
Y++L++GFC+ R++ AK +F M S C +V +Y LI G+CK K +E + L+
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTY T
Sbjct: 423 EMSQRGLVGNTVTYTT 438
Score = 225 bits (574), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 186/327 (56%), Gaps = 6/327 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V +N + L K KH D L+LF +++ G+ PD++TY+ LI+C C GR S +L
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ P+ VTF++LI E +++EA L+ ++ PD+FTY++LING C
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A ++FE M + + C P+ +TYST+ G CK V++ ELF +M +
Sbjct: 378 RLDEAKHMFELMISKD------CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ VTYT+LI GF A D + A+ +F +M+ GV PN++T+N++++ LCKNGK+ +A +
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
E + + + PD YN +++G C G+V ELF ++ G +V +Y +I+G+C+
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
E A SL +M G P TYNT
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNT 578
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 6/287 (2%)
Query: 57 ILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAF 116
IL N + +V + G +++S P V F L+ + ++ +L +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 117 GCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKE 176
G D++TY+ IN CR +AL + +M E PD +T S++ +G C
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLSSLLNGYCHS 166
Query: 177 GFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTF 236
+ A L +M + PD T+T+LI G N +EA L +M+ +G QP++VT+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 237 NVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMES 296
++N LCK G +D A LL+ M + + D +YNT++DG C ++ A LF M++
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 297 NGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
G DVF+Y LI+ C A L S+M+ + I P VVT++
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
++D M++ P + +++ L + D +F+ + S FP++ TY+ LI F
Sbjct: 350 LYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK RV G + + + + VT+T+LI G A +F ++ + G P++
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK------------- 160
TY L++GLC+ G A+ +FE + E + +CK
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 161 -------PDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAND 213
P+ I Y+T+ G C++G ++A L KMK++ P+ TY +LIR D
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 214 WNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEA 252
+ L EM G + T ++ N L +G++D++
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 182 AKELFLKMKDENIN--PDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
AK LF+ + I P V ++ +L C+ + A + E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
N L K+D+A L M++ P +N L+ + L M++ G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
D+++Y I IN +C+ ++ AL++ ++M+ G P +VT ++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 251 bits (641), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 205/376 (54%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + FN L +AK K +D V+SL +++ + + LYTYNILINCF
Sbjct: 72 LFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S +LG++++ + P VT +SL+ G C RI +A AL ++ G +PD
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 123 FTYTTLI-----------------------------------NGLCRTGHTIVALNLFEE 147
T+TTLI NGLC+ G T +ALNL +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M E D + ++TI D LCK VD A LF +M+ + I P+VVTY+SLI
Sbjct: 251 MEAAKIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PN+VTFN +++ K GK EA +L + MI+ + PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
YN+L++GFC+ R+++AK++F M S C DV +Y LI G+CK+K +E L+
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTY T
Sbjct: 425 EMSHRGLVGDTVTYTT 440
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 181/327 (55%), Gaps = 6/327 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ P+ VTF +LI E + +EA L+ + PD+FTY +L+NG C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A +FE M + + C PD +TY+T+ G CK V+ ELF +M +
Sbjct: 380 RLDKAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
D VTYT+LI+G + D + A+ +F +M+ GV P+++T++++++ LC NGK+++A +
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
+ M + ++ D +Y T+++G C G+V+ +LF S+ G +V +Y +I+G C
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ ++ A +L +M G P TYNT
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNT 580
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 181/371 (48%), Gaps = 30/371 (8%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M+ M P + ++ G NK + V +L R+ G P+L TY +++N
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G +L ++ + D V F ++I LC + +A LF ++ G +P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGN------------------GEFGVVCK--- 160
V TY++LI+ LC G A L +M G+F K
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 161 --------PDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAN 212
PD TY+++ +G C +DKAK++F M ++ PDVVTY +LI+GFC +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 213 DWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYN 272
+ LF EM +G+ + VT+ ++ L +G D A ++ + M+ GV PD Y+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 273 TLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK 332
L+DG C G++ +A E+F M+ + D++ Y +I G CK +++ L+ + K
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 333 GIRPTVVTYNT 343
G++P VVTYNT
Sbjct: 535 GVKPNVVTYNT 545
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 8/298 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + +FN L K + L+ + + PD++TYN L+N FC R+ +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 75 LG-RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + CF PD VT+ +LIKG C R+ + LF ++ G D TYTTLI GL
Sbjct: 388 FEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDEN 193
G A +F++M + PD +TYS + DGLC G ++KA E+F M+
Sbjct: 447 HDGDCDNAQKVFKQMVSDG------VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEAS 253
I D+ YT++I G C A ++ LF + +GV+PNVVT+N +++ LC + EA
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
LL+ M + G P++ YNTL+ G + EL M S + D + G++ N
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 31/279 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
++D M++ P + ++N L + D +F+ + S FPD+ TYN LI F
Sbjct: 352 LYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK RV G + + D VT+T+LI+GL + A +F ++ + G PD+
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------------ 158
TY+ L++GLC G AL +F+ M + +
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 159 -----CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAND 213
KP+ +TY+T+ GLC + + +A L KMK++ P+ TY +LIR D
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 214 WNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEA 252
+ L EM + T ++ N L +G++D++
Sbjct: 591 KAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y ++R + ++A LF M+ P++V FN +++ + K K D L E M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
++ + YN L++ FC +++ A L M G + + L+NGYC K I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A++L +M+ G RP +T+ T
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTT 195
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 35/200 (17%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
+D A LF M P +V + L+ ++ L +M + + T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 239 IMNELCKN----------GKM-------------------------DEASRLLELMIQIG 263
++N C+ GKM +A L++ M+++G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 264 VRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGAL 323
RPD + TL+ G L + + A L M GC ++ +YG+++NG CK + + AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 324 SLYSEMLSKGIRPTVVTYNT 343
+L ++M + I VV +NT
Sbjct: 246 NLLNKMEAAKIEADVVIFNT 265
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 203/372 (54%), Gaps = 42/372 (11%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
M++ P P + FN L +AK K +D V+SL +++ +G+ +LYTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
++S +LG++++ + P VT +SL+ G C RI +A AL ++ G +PD T+T
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 127 TLI-----------------------------------NGLCRTGHTIVALNLFEEMANG 151
TLI NGLC+ G +A NL +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 152 NGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYA 211
E D + ++TI D LCK VD A LF +M+ + I P+VVTY+SLI C
Sbjct: 180 KIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 212 NDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVY 271
W++A L +M+++ + PN+VTFN +++ K GK EA +L + MI+ + PD Y
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 272 NTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLS 331
N+L++GFC+ R+++AK++F M S C D+ +Y LI G+CK+K +E L+ EM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 332 KGIRPTVVTYNT 343
+G+ VTY T
Sbjct: 354 RGLVGDTVTYTT 365
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 179/327 (54%), Gaps = 6/327 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ P+ VTF +LI E + +EA L + PD+FTY +LING C
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A +FE M + + C PD TY+T+ G CK V+ ELF +M +
Sbjct: 305 RLDKAKQMFEFMVSKD------CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
D VTYT+LI+G + D + A+ +F +M+ GV P+++T++++++ LC NGK+++A +
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
+ M + ++ D +Y T+++G C G+V+ +LF S+ G +V +Y +I+G C
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ ++ A +L +M G P TYNT
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNT 505
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 182/371 (49%), Gaps = 30/371 (8%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M+ M P + ++ G NK + V +L R+ G P+L TY +++N
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G + F +L ++ + D V F ++I LC + +A LF ++ G +P+
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGN------------------GEFGVVCK--- 160
V TY++LI+ LC G A L +M G+F K
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 161 --------PDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAN 212
PD TY+++ +G C +DKAK++F M ++ PD+ TY +LI+GFC +
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 213 DWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYN 272
+ LF EM +G+ + VT+ ++ L +G D A ++ + M+ GV PD Y+
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 273 TLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK 332
L+DG C G++ +A E+F M+ + D++ Y +I G CK +++ L+ + K
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 333 GIRPTVVTYNT 343
G++P VVTYNT
Sbjct: 460 GVKPNVVTYNT 470
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 150/298 (50%), Gaps = 8/298 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + +FN L K + L + + PD++TYN LIN FC R+ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 75 LG-RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + CF PD T+ +LIKG C R+ + LF ++ G D TYTTLI GL
Sbjct: 313 FEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDEN 193
G A +F++M + GV PD +TYS + DGLC G ++KA E+F M+
Sbjct: 372 HDGDCDNAQKVFKQMVSD----GV--PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEAS 253
I D+ YT++I G C A ++ LF + +GV+PNVVT+N +++ LC + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
LL+ M + G PD+ YNTL+ G + EL M S + D + G++ N
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++N L + D +F+ + S FPDL TYN LI FCK RV G +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ D VT+T+LI+GL + A +F ++ + G PD+ TY+ L++GLC
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 135 TGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPDAIT 165
G AL +F+ M + + KP+ +T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y+T+ GLC + + +A L KMK++ PD TY +LIR D + L EM
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEA 252
+ T ++ N L +G++D++
Sbjct: 528 SCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
PP + +++IL L N + L +F + + D+Y Y +I CK G+V G+
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + P+ VT+ ++I GLC++ + EA AL K++ G PD TY TLI
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 134 RTGHTIVALNLFEEM 148
R G + L EM
Sbjct: 512 RDGDKAASAELIREM 526
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 205/376 (54%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + FN L +AK K +D V+SL +++ +G+ +LYTYNILINCF
Sbjct: 72 LFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S +LG++++ + P VT +SL+ G C RI +A AL ++ G +PD
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 123 FTYTTLI-----------------------------------NGLCRTGHTIVALNLFEE 147
T+TTLI NGLC+ G +A NL +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M E VV YST+ D LCK D A LF +M+++ + P+V+TY+SLI
Sbjct: 251 MEAAKIEANVV------IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PNVVTFN +++ K GK+ EA +L + MI+ + PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
Y++L++GFC+ R++ AK +F M S C +V +Y LING+CK K I+ + L+
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTY T
Sbjct: 425 EMSQRGLVGNTVTYTT 440
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V ++ + L K +H D L+LF + + G+ P++ TY+ LI+C C R S +L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ P+ VTF +LI E +++EA L+ ++ PD+FTY++LING C
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A ++FE M + + C P+ +TY+T+ +G CK +D+ ELF +M +
Sbjct: 380 RLDEAKHMFELMISKD------CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ VTYT+LI GF A D + A+ +F +M+ GV PN++T+N +++ LCKNGK+++A +
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
E + + + P YN +++G C G+V +LF S+ G DV Y +I+G+C+
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 317 KEIEGALSLYSEMLSKGIRP 336
E A +L+ +M G P
Sbjct: 554 GLKEEADALFRKMREDGPLP 573
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 42/377 (11%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M+ M P + ++ G NK + V +L R+ G P+L TY +++N
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G + F +L ++ + + V ++++I LC +A LFT++ G +P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 122 VFTYTTLINGLC-----------------------------------RTGHTIVALNLFE 146
V TY++LI+ LC + G + A L++
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 147 EMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIR 206
EM + PD TYS++ +G C +D+AK +F M ++ P+VVTY +LI
Sbjct: 355 EMIKRS------IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 207 GFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRP 266
GFC A +E LF EM +G+ N VT+ +++ + D A + + M+ GV P
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLY 326
+ YNTL+DG C G++ +A +F ++ + +++Y I+I G CK ++E L+
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 327 SEMLSKGIRPTVVTYNT 343
+ KG++P V+ YNT
Sbjct: 529 CSLSLKGVKPDVIIYNT 545
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 29/283 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +++ L CL + + L + + P++ T+N LI+ F K G++ +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+++ PD T++SLI G C R+ EA +F + + C P+V TY TLING C+
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 135 TGHTIVALNLFEEMAN----GN---------GEFGVV----------------CKPDAIT 165
+ LF EM+ GN G F P+ +T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y+T+ DGLCK G ++KA +F ++ + P + TY +I G C A + LF +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDA 268
+GV+P+V+ +N +++ C+ G +EA L M + G PD+
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
+D A LF M P + + L+ ++ L +M G+ N+ T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 239 IMNELCKN----------GKM-------------------------DEASRLLELMIQIG 263
++N C+ GKM +A L++ M+++G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 264 VRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGAL 323
RPD + TL+ G L + + A L M GC ++ +YG+++NG CK +I+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 324 SLYSEMLSKGIRPTVVTYNT 343
+L ++M + I VV Y+T
Sbjct: 246 NLLNKMEAAKIEANVVIYST 265
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y ++R ++ ++A LF M+ P++ FN +++ + K K D L E M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
++G+ + YN L++ FC +++ A L M G + + L+NGYC K I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A++L +M+ G RP +T+ T
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTT 195
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 206/376 (54%), Gaps = 42/376 (11%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+F M++ P P + F+ L +AK +D V+SL +++ ++G+ + YTY+ILINC
Sbjct: 67 ALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAAL------------ 109
FC+ ++ VLG++++ + P+ VT +SL+ G C RI EA AL
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 110 -----------------------FTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFE 146
++ A GC+PD+ TY ++NGLC+ G T +A NL
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 147 EMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIR 206
+M G E P + Y+TI DGLCK +D A LF +M+ + I P+VVTY+SLI
Sbjct: 246 KMEQGKLE------PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 207 GFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRP 266
C W++A L +M+++ + P+V TF+ +++ K GK+ EA +L + M++ + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLY 326
Y++L++GFC+ R++ AK++F M S C DV +Y LI G+CK K +E + ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 327 SEMLSKGIRPTVVTYN 342
EM +G+ VTYN
Sbjct: 420 REMSQRGLVGNTVTYN 435
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 179/329 (54%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N + L K KH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ PD TF++LI E +++EA L+ ++ P + TY++LING C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
A +FE M + + C PD +TY+T+ G CK V++ E+F +M +
Sbjct: 374 HDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ VTY LI+G A D + A+ +F EM+ GV PN++T+N +++ LCKNGK+++A
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ E + + + P YN +++G C G+V +LF ++ G DV +Y +I+G+C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ E A +L+ EM G P YNT
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 171/329 (51%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++ ++ L K D +L ++ L P + YN +I+ CK + +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ P+ VT++SLI LC R +A+ L + + PDVFT++ LI+ +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G + A L++EM + P +TYS++ +G C +D+AK++F M ++
Sbjct: 339 EGKLVEAEKLYDEMVKRS------IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PDVVTY +LI+GFC E +F EM +G+ N VT+N+++ L + G D A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ + M+ GV P+ YNTL+DG C G++ +A +F ++ + +++Y I+I G C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
K ++E L+ + KG++P VV YNT
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 6/277 (2%)
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
++ + G +++S P + F+ L+ + ++ +L +++ G + +TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
LIN CR +AL + +M E P+ +T S++ +G C + +A L
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYE------PNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKN 246
+M P+ VT+ +LI G N +EA L M+ +G QP++VT+ V++N LCK
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 247 GKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSY 306
G D A LL M Q + P +YNT++DG C ++ A LF ME+ G +V +Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 307 GILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
LI+ C A L S+M+ + I P V T++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 6/245 (2%)
Query: 99 AESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 158
+E ++ +A ALF ++ P + ++ L++ + + V ++L E+M N G+
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112
Query: 159 CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAK 218
+ TYS + + C+ + A + KM P++VT +SL+ G+C++ +EA
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 219 CLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGF 278
L +M G QPN VTFN +++ L + K EA L++ M+ G +PD Y +++G
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 279 CLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTV 338
C G + A L ME V Y +I+G CK K ++ AL+L+ EM +KGIRP V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 339 VTYNT 343
VTY++
Sbjct: 292 VTYSS 296
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F++M+ H P V ++N L K K + + +F+ ++ GL + TYNILI
Sbjct: 383 MFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
+ G + ++ P+ +T+ +L+ GLC ++ +A +F L+ +P +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
+TY +I G+C+ G +LF ++ KPD + Y+T+ G C++G ++A
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKG------VKPDVVAYNTMISGFCRKGSKEEA 555
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
LF +MK++ P+ Y +LIR D + L EM G + T ++ N
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Query: 243 LCKNGKMDEA 252
L +G++D++
Sbjct: 616 L-HDGRLDKS 624
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
PP + ++N L L KN + + +F+ L + P +YTYNI+I CK G+V G+
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+ + PD V + ++I G C + EA ALF +++ G P+ Y TLI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
R G + L +EM + F + + + DG + F+D
Sbjct: 583 RDGDREASAELIKEMRSCG--FAGDASTIGLVTNMLHDGRLDKSFLD 627
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 242 ELCKNG----KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESN 297
+L +NG K+D+A L M++ P ++ L+ + + L M++
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 298 GCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
G + ++Y ILIN +C+ ++ AL++ +M+ G P +VT ++
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 207/376 (55%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + F+ L +AK +D V+SL +++ ++G+ +LYTY+ILINCF
Sbjct: 68 LFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCF 126
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRI------------------- 103
C+ ++S VL ++++ + PD VT SL+ G C +RI
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 104 ----------------MEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEE 147
EA AL ++ GC+PD+ TY ++NGLC+ G +AL+L ++
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M G E GVV Y+TI D LC V+ A LF +M ++ I P+VVTY SLIR
Sbjct: 247 MEQGKIEPGVV------IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PNVVTF+ +++ K GK+ EA +L + MI+ + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
Y++L++GFC+ R++ AK +F M S C +V +Y LI G+CK K ++ + L+
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTY T
Sbjct: 421 EMSQRGLVGNTVTYTT 436
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 185/329 (56%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ P+ VTF++LI E +++EA L+ ++ PD+FTY++LING C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
A ++FE M + + C P+ +TY+T+ G CK VD+ ELF +M +
Sbjct: 374 HDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ VTYT+LI GF A + + A+ +F +M+ GV P+++T++++++ LC NGK++ A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ E + + + PD YN +++G C G+V +LF S+ G +V +Y +++G+C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ E A +L+ EM +G P TYNT
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNT 576
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 7/238 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L K K D + LF+ ++ GL + TY LI+ F + +V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+++ PD +T++ L+ GLC ++ A +F L+ +PD++TY +I G+C+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G +LF ++ GV KP+ +TY+T+ G C++G ++A LF +MK+E
Sbjct: 514 AGKVEDGWDLFCSLSLK----GV--KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEA 252
PD TY +LIR D + L EM + T ++ N L +G++D++
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKS 624
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 141 ALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVT 200
A+NLF +M P + +S + + K D L +M++ I+ ++ T
Sbjct: 65 AVNLFGDMVKSRP------FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y+ LI FC + + A + +MM G +P++VT N ++N C ++ +A L+ M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
++G +PD+ +NTL+ G R + A L M GC D+ +YGI++NG CK +I+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
ALSL +M I P VV YNT
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNT 261
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
++A LF +M+ P++V F+ +++ + K K D L E M +G+ + Y+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
++ FC +++ A + M G D+ + L+NG+C I A+SL +M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 335 RPTVVTYNT 343
+P T+NT
Sbjct: 183 QPDSFTFNT 191
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%)
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
K+D+A L M++ P ++ L+ + + L M++ G ++++Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
ILIN +C+ ++ AL++ ++M+ G P +VT N+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 235 bits (599), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 205/376 (54%), Gaps = 42/376 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M + P P + F+ L +AK +D V+S +++ +G+ +LYTYNILINCF
Sbjct: 65 LFGVMAQSRPFPS-IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCF 123
Query: 63 C----------------KMG-------------------RVSPGFVVLGRILRSCFTPDA 87
C K+G R+S ++ +++ + PD
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDT 183
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEE 147
VTFT+LI GL ++ EA AL ++ GC+PD+ TY ++NGLC+ G T +ALNL +
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
Query: 148 MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRG 207
M E VV YST+ D LCK D A LF +M+++ + P+V+TY+SLI
Sbjct: 244 MEAAKIEANVV------IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
C W++A L +M+++ + PN+VTF+ +++ K GK+ +A +L E MI+ + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
Y++L++GFC+ R+ AK++ M C+ +V +Y LING+CK K ++ + L+
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 328 EMLSKGIRPTVVTYNT 343
EM +G+ VTY T
Sbjct: 418 EMSQRGLVGNTVTYTT 433
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 155/277 (55%), Gaps = 6/277 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V ++ + L K +H D L+LF + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ P+ VTF++LI + ++++A L+ ++ P++FTY++LING C
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A + E M + C P+ +TY+T+ +G CK VDK ELF +M +
Sbjct: 373 RLGEAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+ VTYT+LI GF A D + A+ +F +M+ GV PN++T+N++++ LCKNGK+ +A +
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVS 293
E + + + PD YN +++G C G+ FV+
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M+ M P V ++ G NK + V +L R+ G PDL TY ++N
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV-ALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G +L ++ + + V ++++I LC +A LFT++ G +P+
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 122 VFTYTTLINGLC-----------------------------------RTGHTIVALNLFE 146
V TY++LI+ LC + G + A L+E
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 147 EMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIR 206
EM + P+ TYS++ +G C + +AK++ M ++ P+VVTY +LI
Sbjct: 348 EMIKRS------IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 207 GFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRP 266
GFC A ++ LF EM +G+ N VT+ +++ + D A + + M+ +GV P
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCK 315
+ YN L+DG C G++ +A +F ++ + D+++Y I+I G CK
Sbjct: 462 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
+D A LF M P ++ ++ L+ N ++ +M G+ N+ T+N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 239 IMNELCK------------------------------NG-----KMDEASRLLELMIQIG 263
++N C+ NG ++ +A L++ M+++G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 264 VRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGAL 323
+PD + TL+ G L + + A L M GC D+ +YG ++NG CK + + AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 324 SLYSEMLSKGIRPTVVTYNT 343
+L ++M + I VV Y+T
Sbjct: 239 NLLNKMEAAKIEANVVIYST 258
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y ++R + ++A LF M P+++ F+ +++ + K K D E M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
+G+ + YN L++ FC R++ A L M G D+ + L+NG+C I
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A++L +M+ G +P VT+ T
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTT 188
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPG 71
P + ++NIL L KN + +F+ L + PD+YTYNI+I CK G+ G
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 200/370 (54%), Gaps = 30/370 (8%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + FN L + K K YD V+SL K++ +G+ DLYT+NI+INCF
Sbjct: 72 LFSDMVKSRPFPS-IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C +VS +LG++L+ + PD VT SL+ G C +R+ +A +L K+ G KPD+
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----------------------- 159
Y +I+ LC+T A + F+E+ VV
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 160 ------KPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAND 213
P+ ITYS + D K G V +AKELF +M +I+PD+VTY+SLI G C +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 214 WNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNT 273
+EA +F M+ +G +VV++N ++N CK ++++ +L M Q G+ + YNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 274 LMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKG 333
L+ GF G V++A+E F M+ G D+++Y IL+ G C N E+E AL ++ +M +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 334 IRPTVVTYNT 343
+ +VTY T
Sbjct: 431 MDLDIVTYTT 440
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++N + L K K + FK + G+ P++ TY L+N C R S +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L +++ TP+ +T+++L+ +++EA LF ++ PD+ TY++LINGLC
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
A +F+ M + C D ++Y+T+ +G CK V+ +LF +M +
Sbjct: 308 HDRIDEANQMFDLMVSKG------CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ VTY +LI+GF A D ++A+ F +M G+ P++ T+N+++ LC NG++++A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ E M + + D Y T++ G C TG+V A LF S+ G D+ +Y +++G C
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 315 KNKEIEGALSLYSEMLSKGI 334
+ +LY++M +G+
Sbjct: 482 TKGLLHEVEALYTKMKQEGL 501
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 167/325 (51%), Gaps = 14/325 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++ L L + + L + + P++ TY+ L++ F K G+V +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++R PD VT++SLI GLC RI EA +F + + GC DV +Y TLING C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ LF EM+ + G+V + +TY+T+ G + G VDKA+E F +M I
Sbjct: 343 AKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+PD+ TY L+ G C + +A +F +M + + ++VT+ ++ +CK GK++EA
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L + G++PD Y T+M G C G ++ + L+ M+ G M++ +
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTL 508
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVV 339
+ +I + L +MLS G P+++
Sbjct: 509 SDGDITLSAELIKKMLSCGYAPSLL 533
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
++ A +LF M P +V + L+ ++ L +M G++ ++ TFN+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 239 IMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
++N C ++ A +L M+++G PD +L++GFC RV+ A L M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 299 CMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
D+ +Y +I+ CK K + A + E+ KGIRP VVTY
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
N+A LF +M+ P++V FN +++ + K K D L + M +G+R D +N +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
++ FC +V+ A + M G D + G L+NG+C+ + A+SL +M+ G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 335 RPTVVTYNT 343
+P +V YN
Sbjct: 187 KPDIVAYNA 195
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 245 KNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVF 304
++ K+++A L M++ P +N L+ + + L ME G D++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 305 SYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVT 340
++ I+IN +C ++ ALS+ +ML G P VT
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 197/340 (57%), Gaps = 10/340 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + F+ + +AK+K+YD V+SLF + G+ DLY+YNI+INC
Sbjct: 56 LFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ R V+G++++ + PD VT +SLI G C +R+ +A L +K+ G +PDV
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
Y T+I+G C+ G A+ LF+ M GV + DA+TY+++ GLC G A
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDA 228
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
L M +I P+V+T+T++I F ++EA L+ EM + V P+V T+N ++N
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
LC +G++DEA ++L+LM+ G PD YNTL++GFC + RV+ +LF M G + D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+Y +I GY + + A ++S M S RP + TY+
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYS 385
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 177/362 (48%), Gaps = 39/362 (10%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
M++ P V +++ G N+ +D + L ++ +G PD+ YN +I+ CK+G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
V+ + R+ R DAVT+ SL+ GLC R +AA L + P+V T+T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
+I+ + G A+ L+EEM PD TY+++ +GLC G VD+AK++
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRR------CVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGV----------------- 229
M + PDVVTY +LI GFC + +E LF EM +G+
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 230 ---------------QPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
+PN+ T+++++ LC N ++++A L E M + + D + YN +
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
+ G C G V A +LF S+ G DV SY +I+G+C+ ++ + + LY +M G+
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 335 RP 336
P
Sbjct: 483 LP 484
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 165 TYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEM 224
T+ST + E +D LF KM P +V ++ ++ + +++ LF M
Sbjct: 40 TFSTKRSSMNLEEEID----LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM 95
Query: 225 MDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRV 284
G+ ++ ++N+++N LC+ + A ++ M++ G PD ++L++GFC RV
Sbjct: 96 EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 285 NRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
A +L ME G DV Y +I+G CK + A+ L+ M G+R VTYN+
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 192/341 (56%), Gaps = 7/341 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F +M+ P P + F L +AK K +D V++L L +G+ DLYT N+L+NCF
Sbjct: 59 LFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ + LG++++ F PD VTFTSLI G C +R+ EA ++ ++ G KPDV
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
YTT+I+ LC+ GH AL+LF++M N +G+ +PD + Y+++ +GLC G A
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMEN----YGI--RPDVVMYTSLVNGLCNSGRWRDA 231
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
L M I PDV+T+ +LI F + +A+ L+ EM+ + PN+ T+ ++N
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
C G +DEA ++ LM G PD Y +L++GFC +V+ A ++F M G +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+Y LI G+ + + A ++S M+S+G+ P + TYN
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 179/332 (53%), Gaps = 9/332 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V + + L KN H + LSLF ++ + G+ PD+ Y L+N C GR +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + + PD +TF +LI E + ++A L+ ++ P++FTYT+LING C
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A +F M C PD + Y+++ +G CK VD A ++F +M + +
Sbjct: 295 EGCVDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ +TYT+LI+GF N A+ +F M+ +GV PN+ T+NV+++ LC NGK+ +A
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 255 LLELMIQI---GVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
+ E M + GV P+ YN L+ G C G++ +A +F M + +Y I+I
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 312 GYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
G CK +++ A++L+ + SKG++P VVTY T
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 4/262 (1%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+++ M+RM +P + ++ L D +F + + G FPD+ Y LIN F
Sbjct: 269 LYNEMIRMSIAPN-IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK +V + + + T + +T+T+LI+G + A +F+ + + G P++
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY L++ LC G AL +FE+M + GV P+ TY+ + GLC G ++KA
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-GVA--PNIWTYNVLLHGLCYNGKLEKA 444
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
+F M+ ++ ++TYT +I+G C A A LF + +GV+PNVVT+ +++
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 243 LCKNGKMDEASRLLELMIQIGV 264
L + G EA L M + GV
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGV 526
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 6 YMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKM 65
Y++ P V ++ L K K D + +F ++ GL + TY LI F ++
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 66 GRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAF---GCKPDV 122
G+ + V ++ P+ T+ L+ LC ++ +A +F ++ G P++
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEM---------------ANGNGEFGVV--------- 158
+TY L++GLC G AL +FE+M G + G V
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 159 -----CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENIN 195
KP+ +TY+T+ GL +EG +A LF KMK++ ++
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y ++R ++ +NEA LF M++ P+++ F ++N + K K D L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
+GV D N LM+ FC + + A M G D+ ++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A+S+ ++M+ GI+P VV Y T
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTT 182
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 228 bits (581), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 195/342 (57%), Gaps = 8/342 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M++ P P + F+ L +AK +D V+SL +++ ++G+ +LYTY+I IN F
Sbjct: 62 LFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S +LG++++ + P VT SL+ G C +RI EA AL ++ G +PD
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
T+TTL++GL + A+ L E M C+PD +TY + +GLCK G D A
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRGEPDLA 234
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
L KM+ I DVV Y ++I G C ++A LF +M +G++P+V T+N +++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSM-ESNGCMR 301
LC G+ +ASRLL M++ + PD +N L+D F G++ A++L+ M +S C
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 302 DVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
DV +Y LI G+CK K +E + ++ EM +G+ VTY T
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 179/372 (48%), Gaps = 31/372 (8%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+ D M+ M P V ++ G NK + V +L +R+ G PDL TY +IN
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVING 224
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
CK G +L ++ + D V + ++I GLC + +A LF K+ G KPD
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------------------- 158
VFTY LI+ LC G A L +M N +V
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 159 -------CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYA 211
C PD + Y+T+ G CK V++ E+F +M + + VTYT+LI GF A
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 212 NDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVY 271
D + A+ +F +M+ GV P+++T+N++++ LC NG ++ A + E M + ++ D Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 272 NTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLS 331
T+++ C G+V +LF S+ G +V +Y +++G+C+ E A +L+ EM
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 332 KGIRPTVVTYNT 343
G P TYNT
Sbjct: 525 DGPLPNSGTYNT 536
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 167/326 (51%), Gaps = 7/326 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V +N + L K KH D LF ++ + G+ PD++TYN LI+C C GR S +L
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RAFGCKPDVFTYTTLINGLCRT 135
+L PD V F +LI E +++EA L+ ++ ++ C PDV Y TLI G C+
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 136 GHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENIN 195
+ +F EM+ + G+V + +TY+T+ G + D A+ +F +M + ++
Sbjct: 370 KRVEEGMEVFREMS----QRGLV--GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 196 PDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRL 255
PD++TY L+ G C + A +F M + ++ ++VT+ ++ LCK GK+++ L
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 256 LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCK 315
+ GV+P+ Y T+M GFC G A LFV M+ +G + + +Y LI +
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Query: 316 NKEIEGALSLYSEMLSKGIRPTVVTY 341
+ + + L EM S G T+
Sbjct: 544 DGDEAASAELIKEMRSCGFAGDASTF 569
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 6/251 (2%)
Query: 92 SLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANG 151
+L + + + ++ +A LF + P + ++ L++ + + + ++L E+M N
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN- 103
Query: 152 NGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYA 211
G+ + TYS + C+ + A + KM P +VT SL+ GFC+
Sbjct: 104 ---LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 212 NDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVY 271
N +EA L +M++ G QP+ VTF +++ L ++ K EA L+E M+ G +PD Y
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 272 NTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLS 331
+++G C G + A L ME DV Y +I+G CK K ++ A L+++M +
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 332 KGIRPTVVTYN 342
KGI+P V TYN
Sbjct: 279 KGIKPDVFTYN 289
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 7/250 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
++D M++ P V ++N L K K + + +F+ ++ GL + TY LI+ F
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
+ +V +++ PD +T+ L+ GLC + A +F ++ K D+
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TYTT+I LC+ G +LF ++ KP+ +TY+T+ G C++G ++A
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKG------VKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
LF++MK++ P+ TY +LIR D + L EM G + TF ++ N
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Query: 243 LCKNGKMDEA 252
L +G++D++
Sbjct: 576 L-HDGRLDKS 584
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%)
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
++A LF +M+ P++V F+ +++ + K K D L E M +G+ + Y+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
++ FC +++ A + M G + + L+NG+C I A++L +M+ G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 335 RPTVVTYNT 343
+P VT+ T
Sbjct: 177 QPDTVTFTT 185
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 49/96 (51%)
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
K+D+A L M++ P ++ L+ + + L M++ G ++++Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I IN +C+ ++ AL++ +M+ G P++VT N+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 228 bits (580), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 186/328 (56%), Gaps = 6/328 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P +FN L L K H + + + G PD+YTYN +I+ CK+G V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L +++ +P+ VT+ +LI LC E+++ EA L L + G PDV T+ +LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
T + VA+ LFEEM + C+PD TY+ + D LC +G +D+A + +M+
Sbjct: 413 TRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
V+TY +LI GFC AN EA+ +F EM GV N VT+N +++ LCK+ ++++A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L++ MI G +PD YN+L+ FC G + +A ++ +M SNGC D+ +YG LI+G C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYN 342
K +E A L + KGI T YN
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYN 614
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 182/365 (49%), Gaps = 42/365 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTY------------------- 55
P V +FN+L L + + + + + S GL PD T+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 56 ----------------NILINCFCKMGRVSPGFVVLGRIL-RSCFTPDAVTFTSLIKGLC 98
N++++ FCK GRV + + + F PD TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 99 AESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 158
+ A + + G PDV+TY ++I+GLC+ G A+ + ++M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360
Query: 159 CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAK 218
C P+ +TY+T+ LCKE V++A EL + + I PDV T+ SLI+G C + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 219 CLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGF 278
LF EM +G +P+ T+N++++ LC GK+DEA +L+ M G YNTL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 279 CLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTV 338
C + A+E+F ME +G R+ +Y LI+G CK++ +E A L +M+ +G +P
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 339 VTYNT 343
TYN+
Sbjct: 541 YTYNS 545
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 178/343 (51%), Gaps = 5/343 (1%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
+ D+M+ P +N + L V +++ G+ PD+ T+N+LI
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
C+ ++ P ++L + PD TFT++++G E + A + ++ FGC
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
+ +++G C+ G ALN +EM+N +G F PD T++T+ +GLCK G V
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAGHVK 312
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
A E+ M E +PDV TY S+I G C + EA + +M+ + PN VT+N ++
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
+ LCK +++EA+ L ++ G+ PD +N+L+ G CLT A ELF M S GC
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
D F+Y +LI+ C +++ AL++ +M G +V+TYNT
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 8/300 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P VC+FN L L +++ + LF+ + S G PD +TYN+LI+ C G++ +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ S +T+ +LI G C ++ EA +F ++ G + TY TLI+GLC+
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ A L ++M G+ KPD TY+++ C+ G + KA ++ M
Sbjct: 518 SRRVEDAAQLMDQMIM-EGQ-----KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PD+VTY +LI G C A A L + +G+ +N ++ L + K EA
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 255 LL-ELMIQIGVRPDASVYNTLMDGFCL-TGRVNRAKELFVSMESNGCMRDVFSYGILING 312
L E++ Q PDA Y + G C G + A + V + G + + S +L G
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 8/226 (3%)
Query: 120 PDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
P+ Y ++ L R+G + E+M + E G T+ + + +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS------TFLILIESYAQFELQ 134
Query: 180 DKAKELFLKMKDE-NINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
D+ + M DE + PD Y ++ N + +M G++P+V TFNV
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 239 IMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
++ LC+ ++ A +LE M G+ PD + T+M G+ G ++ A + M G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 299 CMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK-GIRPTVVTYNT 343
C S ++++G+CK +E AL+ EM ++ G P T+NT
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 192/342 (56%), Gaps = 9/342 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
F +F M+ P P + F L A + Y+TV+ +++ G+ DLY++ ILI+
Sbjct: 56 FALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
CFC+ R+S VLG++++ + P VTF SL+ G C +RI +A +L + G +P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
+V Y TLI+GLC+ G +AL L EM G G D +TY+T+ GLC G
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADVVTYNTLLTGLCYSGRW 227
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
A + M +INPDVVT+T+LI F + +EA+ L+ EM+ V PN VT+N I
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
+N LC +G++ +A + +LM G P+ YNTL+ GFC V+ +LF M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
D+F+Y LI+GYC+ ++ AL ++ M+S+ + P ++T+
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 155/320 (48%), Gaps = 6/320 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N L L KN + L L + GL D+ TYN L+ C GR S +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L +++ PD VTFT+LI + + EA L+ ++ P+ TY ++INGLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A F+ MA+ C P+ +TY+T+ G CK VD+ +LF +M E
Sbjct: 294 HGRLYDAKKTFDLMASKG------CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
N D+ TY +LI G+C A +F M+ + V P+++T ++++ LC NG+++ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ M + YN ++ G C +V +A ELF + G D +Y I+I G C
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 315 KNKEIEGALSLYSEMLSKGI 334
KN A L M +GI
Sbjct: 468 KNGPRREADELIRRMKEEGI 487
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%)
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
+ A LF +M P +V +T L+ + +M G+ ++ +F ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
++ C+ ++ A +L M+++G P + +L+ GFCL R+ A L + M +G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+V Y LI+G CKN E+ AL L +EM KG+ VVTYNT
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 207 GFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRP 266
GF ++ + +A LF EM+ P++V F ++ + + + M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLY 326
D + L+ FC R++ A + M G + ++G L++G+C I A SL
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 327 SEMLSKGIRPTVVTYNT 343
M+ G P VV YNT
Sbjct: 165 ILMVKSGYEPNVVVYNT 181
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 218 bits (556), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 183/357 (51%), Gaps = 29/357 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N + L K + D + + + G+ PD TYN +++ +C G+
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ PD VT++ L+ LC R MEA +F + G KP++ TY TL+ G
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 135 TGHTIVALNLFEEMANGN---------------GEFGVVCK--------------PDAIT 165
G + L + M + G V + P+A+T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y + LCK G V+ A F +M DE ++P + Y SLI G C N W A+ L +EM+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVN 285
D+G+ N + FN I++ CK G++ E+ +L ELM++IGV+P+ YNTL++G+CL G+++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 286 RAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
A +L M S G + +Y LINGYCK +E AL L+ EM S G+ P ++TYN
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 189/378 (50%), Gaps = 44/378 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYNILI 59
+FD +LR + N +A++ V S + R+ G + PDL TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTYGILI 94
Query: 60 NCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRAFGC 118
C C+ GR+ GF LG +++ F DA+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 95 GCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 119 KPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGF 178
P+VF+Y L+ GLC + AL L MA+ G PD ++Y+T+ +G KEG
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGD 211
Query: 179 VDKAKELFLKMKDENINPDVVTYTSL---------------------------------- 204
DKA + +M D I PDVVTY S+
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 205 -IRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIG 263
+ G+C + EA +M GV+P+VVT++++M+ LCKNG+ EA ++ + M + G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 264 VRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGAL 323
++P+ + Y TL+ G+ G + L M NG D + + ILI Y K +++ A+
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 324 SLYSEMLSKGIRPTVVTY 341
++S+M +G+ P VTY
Sbjct: 392 LVFSKMRQQGLNPNAVTY 409
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 180/364 (49%), Gaps = 29/364 (7%)
Query: 9 RMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRV 68
R SPP V S+ + K D S + + G+ PD+ TYN +I CK +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 69 SPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTL 128
VL ++++ PD +T+ S++ G C+ + EA K+R+ G +PDV TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 129 INGLCRTGHTIVALNLFEEMA---------------NGNGEFGVVCK------------- 160
++ LC+ G + A +F+ M G G + +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 161 -PDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKC 219
PD +S + K+G VD+A +F KM+ + +NP+ VTY ++I C + +A
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 220 LFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFC 279
F +M+D+G+ P + +N +++ LC K + A L+ M+ G+ + +N+++D C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 280 LTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVV 339
GRV +++LF M G +V +Y LINGYC +++ A+ L S M+S G++P V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 340 TYNT 343
TY+T
Sbjct: 548 TYST 551
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 7/340 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
IFD M + P + ++ L A + L + G+ PD Y ++ILI +
Sbjct: 323 IFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
K G+V +V ++ + P+AVT+ ++I LC R+ +A F ++ G P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
Y +LI+GLC A L EM + +C + I +++I D CKEG V ++
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGRVIES 495
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
++LF M + P+V+TY +LI G+C A +EA L M+ G++PN VT++ ++N
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
CK +M++A L + M GV PD YN ++ G T R AKEL+V + +G +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+ +Y I+++G CKNK + AL ++ + ++ T+N
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 655
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 173/368 (47%), Gaps = 46/368 (12%)
Query: 3 IFDYMLR--MHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
+ D M+R +HP F+IL AK D + +F ++ GL P+ TY +I
Sbjct: 358 LLDLMVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCA--------------------- 99
CK GRV + +++ +P + + SLI GLC
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 100 --------------ESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLF 145
E R++E+ LF + G KP+V TY TLING C G A+ L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 146 EEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLI 205
M + V KP+ +TYST+ +G CK ++ A LF +M+ ++PD++TY ++
Sbjct: 535 SGMVS------VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 206 RGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVR 265
+G AK L++ + + G Q + T+N+I++ LCKN D+A ++ + + + ++
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 266 PDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSL 325
+A +N ++D GR + AK+LFV+ SNG + + ++Y ++ +E L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 326 YSEMLSKG 333
+ M G
Sbjct: 709 FLSMEDNG 716
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F+ M+R+ P V ++N L D + L + S+GL P+ TY+ LIN +
Sbjct: 498 LFELMVRI-GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK+ R+ V+ + S +PD +T+ +++GL R A L+ ++ G + ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY +++GLC+ T AL +F+ + + K +A T++ + D L K G D+A
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMD------LKLEARTFNIMIDALLKVGRNDEA 670
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
K+LF+ + P+ TY + E LF+ M D G + N I+ E
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 730
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMD 276
L + G++ A L ++ + +AS + +D
Sbjct: 731 LLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 192 ENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDE 251
+ + PD+ TY LI C A + ++ +G + + + F ++ LC + + +
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 252 ASRL-LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESN---GCMRDVFSYG 307
A + L M ++G P+ YN L+ G C R A EL M + G DV SY
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ING+ K + + A S Y EML +GI P VVTYN+
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 187/336 (55%), Gaps = 7/336 (2%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
M HP P + F+ L +AK Y+ V+SLF+ L +G+ DLY++ LI+CFC+
Sbjct: 70 MAESHP-LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
R+S LG++++ F P VTF SL+ G C +R EA +L ++ G +P+V Y
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
T+I+ LC G AL++ + M + G+ +PD +TY+++ L G + +
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKN 246
M I+PDV+T+++LI + EAK + EM+ + V PN+VT+N ++N LC +
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 247 GKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSY 306
G +DEA ++L +++ G P+A YNTL++G+C RV+ ++ M +G D F+Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 307 GILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
L GYC+ + A + M+S G+ P + T+N
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N + L + +T L + K + +G+ PD+ TYN LI G +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++R +PD +TF++LI E +++EA + ++ P++ TY +LINGLC
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A + + + G F P+A+TY+T+ +G CK VD ++ M + +
Sbjct: 302 HGLLDEAKKVLNVLVS-KGFF-----PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ D TY +L +G+C A ++ A+ + M+ GV P++ TFN++++ LC +GK+ +A
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
LE + + YN ++ G C +V A LF S+ G DV +Y ++ G
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 315 KNKEIEGALSLYSEMLSK-GIRP 336
+ + A LY +M + G+ P
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMP 498
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y +R ++ +N+A LF +M + P++V F+ ++ + K K + L +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
+G+ D + TL+D FC R++ A M G + ++G L+NG+C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A+SL +++ G P VV YNT
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNT 189
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 218 bits (555), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 186/342 (54%), Gaps = 8/342 (2%)
Query: 4 FDYMLRM-HPSP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
D RM H P P + F L +AK YD V+SLF+++ +G+ P L T NI+++C
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
C + LG++++ F PD VTFTSL+ G C +RI +A ALF ++ G KP+
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDK 181
V TYTTLI LC+ H A+ LF +M NG +P+ +TY+ + GLC+ G
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIGRWGD 241
Query: 182 AKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMN 241
A L M I P+V+T+T+LI F EAK L+ M+ V P+V T+ ++N
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 242 ELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMR 301
LC G +DEA ++ LM + G P+ +Y TL+ GFC + RV ++F M G +
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 302 DVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ +Y +LI GYC + A ++++M S+ P + TYN
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 181/339 (53%), Gaps = 7/339 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+FD +L M P V ++ L CL KN+H + + LF ++ + G P++ TYN L+
Sbjct: 175 LFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C++GR +L +++ P+ +TFT+LI ++MEA L+ + PDV
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
FTY +LINGLC G A +F M NG C P+ + Y+T+ G CK V+
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
++F +M + + + +TYT LI+G+C + A+ +F +M + P++ T+NV+++
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
LC NGK+++A + E M + + + Y ++ G C G+V A +LF S+ S G +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
V +Y +I+G+C+ I A SL+ +M G P Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Query: 169 ITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQG 228
+ +GL F D A +LF +M P ++ +T L+ N ++ LF +M G
Sbjct: 55 LRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 229 VQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAK 288
+ P + T N++M+ +C + + AS L M+++G PD + +L++G+C R+ A
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 289 ELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
LF + G +V +Y LI CKN+ + A+ L+++M + G RP VVTYN
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 200 TYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELM 259
+Y ++R + +N+A LF M+ P+++ F +++ + K + D L E M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 260 IQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEI 319
+G+ P N +M CL+ + RA M G D+ ++ L+NGYC I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 320 EGALSLYSEMLSKGIRPTVVTYNT 343
E A++L+ ++L G +P VVTY T
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTT 193
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 178/317 (56%), Gaps = 12/317 (3%)
Query: 27 LAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPD 86
L K + +L + L G PD+ TYN++I+ +CK G ++ VL R+ +PD
Sbjct: 150 LGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFE 146
VT+ ++++ LC ++ +A + ++ C PDV TYT LI CR A+ L +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 147 EMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIR 206
EM + C PD +TY+ + +G+CKEG +D+A + M P+V+T+ ++R
Sbjct: 264 EMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 207 GFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRP 266
C W +A+ L +M+ +G P+VVTFN+++N LC+ G + A +LE M Q G +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLY 326
++ YN L+ GFC +++RA E M S GC D+ +Y ++ CK+ ++E A+ +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 327 SEMLSKGIRPTVVTYNT 343
+++ SKG P ++TYNT
Sbjct: 438 NQLSSKGCSPVLITYNT 454
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 174/359 (48%), Gaps = 34/359 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N++ K + LS+ R++ + PD+ TYN ++ C G++ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 75 LGRIL-RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
L R+L R C+ PD +T+T LI+ C +S + A L ++R GC PDV TY L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCK-----------------------------PDAI 164
+ G A+ +M + + V+ P +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 165 TYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEM 224
T++ + + LC++G + +A ++ KM P+ ++Y L+ GFC + A M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 225 MDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRV 284
+ +G P++VT+N ++ LCK+GK+++A +L + G P YNT++DG G+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 285 NRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+A +L M + D +Y L+ G + +++ A+ + E GIRP VT+N+
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 169/327 (51%), Gaps = 6/327 (1%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
+R P V ++N+L + K D + + S G P++ T+NI++ C GR
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
+L +LR F+P VTF LI LC + + A + K+ GC+P+ +Y
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 128 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFL 187
L++G C+ A+ E M + C PD +TY+T+ LCK+G V+ A E+
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRG------CYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 188 KMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG 247
++ + +P ++TY ++I G A +A L EM + ++P+ +T++ ++ L + G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
K+DEA + ++G+RP+A +N++M G C + + +RA + V M + GC + SY
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGI 334
ILI G + AL L +E+ +KG+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 163/340 (47%), Gaps = 34/340 (10%)
Query: 30 NKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVT 89
N HY +V S F D+ + N L + G + GF L ++ PD +
Sbjct: 88 NGHYSSVNSSFA-------LEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMA 149
T+LI+G C + +AA + L G PDV TY +I+G C+ G AL++ + M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 150 NG---------------NGEFGVV-----------CKPDAITYSTITDGLCKEGFVDKAK 183
+G+ C PD ITY+ + + C++ V A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 184 ELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNEL 243
+L +M+D PDVVTY L+ G C +EA +M G QPNV+T N+I+ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 244 CKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDV 303
C G+ +A +LL M++ G P +N L++ C G + RA ++ M +GC +
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 304 FSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
SY L++G+CK K+++ A+ M+S+G P +VTYNT
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 170/339 (50%), Gaps = 7/339 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+ D ML+ P V ++ IL ++ + L + G PD+ TYN+L+N
Sbjct: 226 VLDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK GR+ L + S P+ +T +++ +C+ R M+A L + G P V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
T+ LIN LCR G A+++ E+M C+P++++Y+ + G CKE +D+A
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
E +M PD+VTY +++ C +A + ++ +G P ++T+N +++
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
L K GK +A +LL+ M ++PD Y++L+ G G+V+ A + F E G +
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
++ ++ G CK+++ + A+ M+++G +P +Y
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 6/287 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V + NI+ + + L + G P + T+NILIN C+ G + +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ + P+++++ L+ G C E ++ A ++ + GC PD+ TY T++ LC+
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A+ + ++++ C P ITY+T+ DGL K G KA +L +M+ +++
Sbjct: 427 DGKVEDAVEILNQLSSKG------CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PD +TY+SL+ G +EA F E G++PN VTFN IM LCK+ + D A
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMR 301
L MI G +P+ + Y L++G G A EL + + G M+
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 587
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 137/257 (53%), Gaps = 8/257 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +FNIL L + + + +++ G P+ +YN L++ FCK ++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 75 LGRIL-RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
L R++ R C+ PD VT+ +++ LC + ++ +A + +L + GC P + TY T+I+GL
Sbjct: 402 LERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDEN 193
+ G T A+ L +EM + KPD ITYS++ GL +EG VD+A + F + +
Sbjct: 461 KAGKTGKAIKLLDEMRAKD------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEAS 253
I P+ VT+ S++ G C + + A + M+++G +PN ++ +++ L G EA
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 254 RLLELMIQIGVRPDASV 270
LL + G+ +S
Sbjct: 575 ELLNELCNKGLMKKSSA 591
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 185/328 (56%), Gaps = 6/328 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L K + D L + + GL P+L +YN++IN C+ GR+ V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + R ++ D VT+ +LIKG C E +A + ++ G P V TYT+LI+ +C+
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G+ A+ ++M +C P+ TY+T+ DG ++G++++A + +M D
Sbjct: 358 AGNMNRAMEFLDQM-----RVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+P VVTY +LI G C +A + +M ++G+ P+VV+++ +++ C++ +DEA R
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ M++ G++PD Y++L+ GFC R A +L+ M G D F+Y LIN YC
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYN 342
++E AL L++EM+ KG+ P VVTY+
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 174/329 (52%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + S+N++ L + V + +N G D TYN LI +CK G V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+LR TP +T+TSLI +C + A ++R G P+ TYTTL++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G+ A + EM N NG P +TY+ + +G C G ++ A + MK++ +
Sbjct: 393 KGYMNEAYRVLREM-NDNG-----FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+PDVV+Y++++ GFC + D +EA + EM+++G++P+ +T++ ++ C+ + EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L E M+++G+ PD Y L++ +C+ G + +A +L M G + DV +Y +LING
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
K A L ++ + P+ VTY+T
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 176/339 (51%), Gaps = 7/339 (2%)
Query: 6 YMLRMHPSPPPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCK 64
++ + H P V S+N +L + ++ ++FK + + P+++TYNILI FC
Sbjct: 158 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 217
Query: 65 MGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFT 124
G + + ++ P+ VT+ +LI G C +I + L + G +P++ +
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 125 YTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKE 184
Y +INGLCR G + EM N G D +TY+T+ G CKEG +A
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEM-NRRG-----YSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 185 LFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELC 244
+ +M + P V+TYTSLI C A + N A +M +G+ PN T+ +++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 245 KNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVF 304
+ G M+EA R+L M G P YN L++G C+TG++ A + M+ G DV
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 305 SYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
SY +++G+C++ +++ AL + EM+ KGI+P +TY++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 170/325 (52%), Gaps = 7/325 (2%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR-VSPGFVVLGRI 78
F+++ ++ D LS+ + G P + +YN +++ + R +S V +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 79 LRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHT 138
L S +P+ T+ LI+G C I A LF K+ GC P+V TY TLI+G C+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 139 IVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDV 198
L MA E P+ I+Y+ + +GLC+EG + + + +M + D
Sbjct: 257 DDGFKLLRSMALKGLE------PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLEL 258
VTY +LI+G+C ++++A + EM+ G+ P+V+T+ +++ +CK G M+ A L+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 259 MIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
M G+ P+ Y TL+DGF G +N A + M NG V +Y LING+C +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 319 IEGALSLYSEMLSKGIRPTVVTYNT 343
+E A+++ +M KG+ P VV+Y+T
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYST 455
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 181/349 (51%), Gaps = 22/349 (6%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
MLR H P V ++ L + K + + + ++ GL P+ TY L++ F + G
Sbjct: 336 MLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
++ + VL + + F+P VT+ +LI G C ++ +A A+ ++ G PDV +Y+
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
T+++G CR+ AL + EM E G+ KPD ITYS++ G C++ +A +L+
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMV----EKGI--KPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKN 246
+M + PD TYT+LI +C D +A L EM+++GV P+VVT++V++N L K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 247 GKMDEASRLLELMIQIGVRPDASVYNTLMD---------------GFCLTGRVNRAKELF 291
+ EA RLL + P Y+TL++ GFC+ G + A ++F
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 292 VSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVT 340
SM D +Y I+I+G+C+ +I A +LY EM+ G VT
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 140/334 (41%), Gaps = 56/334 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L + +++ + + GL PD+ +Y+ +++ FC+ V V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++ PD +T++SLI+G C + R EA L+ ++ G PD FTYT LIN C
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLK------ 188
G AL L EM E GV+ PD +TYS + +GL K+ +AK L LK
Sbjct: 533 EGDLEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 189 --------------------------------------------MKDENINPDVVTYTSL 204
M +N PD Y +
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 205 IRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGV 264
I G C A D +A L+ EM+ G + VT ++ L K GK++E + ++ +++
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCE 706
Query: 265 RPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
+A L++ G ++ ++ M +G
Sbjct: 707 LSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 36/112 (32%)
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMR-------------------------- 301
+SV++ ++ + +++A + +++G M
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 302 ----------DVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+VF+Y ILI G+C I+ AL+L+ +M +KG P VVTYNT
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 189/342 (55%), Gaps = 7/342 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
F +F ML+ P P + F + +AK +D V+ L+ ++ ++G+ DLY++ ILI+
Sbjct: 64 FSLFCEMLQSRP-IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
CFC+ R+S +LG++++ F P VT SL+ G C +R EA +L + FG P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
+V Y T+INGLC+ AL +F M + DA+TY+T+ GL G
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKG------IRADAVTYNTLISGLSNSGRWT 236
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
A L M I+P+V+ +T+LI F + EA+ L+ EM+ + V PNV T+N ++
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
N C +G + +A + +LM+ G PD YNTL+ GFC + RV +LF M G +
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
D F+Y LI+GYC+ ++ A +++ M+ G+ P +VTYN
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 167/328 (50%), Gaps = 6/328 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N + L KN+ + L +F + G+ D TYN LI+ GR + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L +++ P+ + FT+LI E ++EA L+ ++ P+VFTY +LING C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A +F+ M + C PD +TY+T+ G CK V+ +LF +M + +
Sbjct: 302 HGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
D TY +LI G+C A N A+ +F M+D GV P++VT+N++++ LC NGK+++A
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
++E + + + D YN ++ G C T ++ A LF S+ G D +Y +I+G C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+ A L M G P+ Y+
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L K+K + + LF + GL D +TYN LI+ +C+ G+++ V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
R++ +PD VT+ L+ LC +I +A + L+ D+ TY +I GLCR
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
T A LF + GV KPDAI Y T+ GLC++G +A +L +MK++
Sbjct: 442 TDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 195 NPDVVTYTSLIR 206
P Y +R
Sbjct: 496 MPSERIYDETLR 507
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
Y +R + +++A LF EM+ P++V F ++ + K K D L M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
+G+ D + L+ FC R++ A L M G + + G L+NG+C+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A+SL M G P VV YNT
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNT 189
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 167/294 (56%), Gaps = 6/294 (2%)
Query: 50 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAAL 109
PD++ YN LIN FCKM R+ VL R+ F+PD VT+ +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 110 FTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTI 169
+L + C+P V TYT LI G AL L +EM + KPD TY+TI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 170 TDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGV 229
G+CKEG VD+A E+ ++ + PDV++Y L+R W E + L +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 230 QPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKE 289
PNVVT+++++ LC++GK++EA LL+LM + G+ PDA Y+ L+ FC GR++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 290 LFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+M S+GC+ D+ +Y ++ CKN + + AL ++ ++ G P +YNT
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L K D + R+ S PD TYNI+I C G++ V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++L P +T+T LI+ E + EA L ++ + G KPD+FTY T+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A + + C+PD I+Y+ + L +G ++ ++L KM E
Sbjct: 276 EGMVDRAFEMVRNLELKG------CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+P+VVTY+ LI C EA L M ++G+ P+ +++ ++ C+ G++D A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
LE MI G PD YNT++ C G+ ++A E+F + GC + SY + +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ + AL + EM+S GI P +TYN+
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNS 478
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 6/298 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++N + + K D + + L G PD+ +YNIL+ G+ G +
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ ++ P+ VT++ LI LC + +I EA L ++ G PD ++Y LI CR
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G VA+ E M + C PD + Y+T+ LCK G D+A E+F K+ +
Sbjct: 381 EGRLDVAIEFLETMISDG------CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+P+ +Y ++ + D A + +EMM G+ P+ +T+N +++ LC+ G +DEA
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILING 312
LL M P YN ++ GFC R+ A + SM NGC + +Y +LI G
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 6/283 (2%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
L + P V S+NIL L ++ L ++ S P++ TY+ILI C+ G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
+ +L + TPDA ++ LI C E R+ A + + GC PD+ Y T
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 128 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFL 187
++ LC+ G AL +F ++ GE G C P++ +Y+T+ L G +A + L
Sbjct: 409 VLATLCKNGKADQALEIFGKL----GEVG--CSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 188 KMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG 247
+M I+PD +TY S+I C +EA L ++M P+VVT+N+++ CK
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKEL 290
++++A +LE M+ G RP+ + Y L++G G A EL
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 9/278 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +++IL L ++ + ++L K + GL PD Y+Y+ LI FC+ GR+
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ PD V + +++ LC + +A +F KL GC P+ +Y T+ + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 135 TGHTIVALNL-FEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDEN 193
+G I AL++ E M+NG PD ITY+++ LC+EG VD+A EL + M+
Sbjct: 451 SGDKIRALHMILEMMSNG-------IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEAS 253
+P VVTY ++ GFC A+ +A + M+ G +PN T+ V++ + G EA
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELF 291
L +++I + S + L F L + R+ + F
Sbjct: 564 ELANDLVRIDAISEYS-FKRLHRTFPLLNVLQRSSQTF 600
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 98 CAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGV 157
C +E+ L + G PDV T LI G + A+ + E + +FG
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE----KFG- 154
Query: 158 VCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEA 217
+PD Y+ + +G CK +D A + +M+ ++ +PD VTY +I C + A
Sbjct: 155 --QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 218 KCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDG 277
+ +++ QP V+T+ +++ G +DEA +L++ M+ G++PD YNT++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 278 FCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPT 337
C G V+RA E+ ++E GC DV SY IL+ + E L ++M S+ P
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 338 VVTYN 342
VVTY+
Sbjct: 333 VVTYS 337
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 1/170 (0%)
Query: 174 CKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNV 233
C+ G ++ L M + NPDV+ T LI+GF + +A +E++++ QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEILEKFGQPDV 158
Query: 234 VTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVS 293
+N ++N CK ++D+A+R+L+ M PD YN ++ C G+++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 294 MESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ S+ C V +Y ILI ++ AL L EMLS+G++P + TYNT
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 183/339 (53%), Gaps = 42/339 (12%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F +M++ P P + F+ L ++K K YD V+ L++++ +G+ +L T NIL+NCF
Sbjct: 68 LFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ ++S LG++++ G +P +
Sbjct: 127 CRCSQLSLALSFLGKMIK-----------------------------------LGHEPSI 151
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
T+ +L+NG CR AL +F++M G+ KP+ + Y+TI DGLCK VD A
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMV------GMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
+L +M+ + I PDVVTY SLI G C + W++A + M + + P+V TFN +++
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
K G++ EA E MI+ + PD Y+ L+ G C+ R++ A+E+F M S GC D
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
V +Y ILINGYCK+K++E + L+ EM +G+ VTY
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 175/337 (51%), Gaps = 7/337 (2%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
M+++ P V ++L G ++ YD L +F ++ +G P++ YN +I+ CK
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDA-LYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
+V +L R+ + PD VT+ SLI GLC+ R +A + + + PDVFT+
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
LI+ + G A +EEM + + PD +TYS + GLC +D+A+E+F
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLD------PDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKN 246
M + PDVVTY+ LI G+C + LF EM +GV N VT+ +++ C+
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 247 GKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSY 306
GK++ A + M+ GV P+ YN L+ G C G++ +A + M+ NG D+ +Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 307 GILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I+I G CK E+ A +Y + +G+ P + TY T
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 172/334 (51%), Gaps = 7/334 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+FD M+ M P V +N + L K+K D L L R+ G+ PD+ TYN LI+
Sbjct: 173 MFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C GR S ++ + + PD TF +LI E R+ EA + ++ PD+
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY+ LI GLC A +F M + C PD +TYS + +G CK V+
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKKVEHG 345
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
+LF +M + + VTYT LI+G+C A N A+ +F M+ GV PN++T+NV+++
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
LC NGK+++A +L M + G+ D YN ++ G C G V A +++ S+ G M D
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRP 336
+++Y ++ G K A +L+ +M GI P
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 29/282 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L L + + + + ++PD++T+N LI+ K GRVS
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++R PD VT++ LI GLC SR+ EA +F + + GC PDV TY+ LING C+
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 135 TGHTIVALNLFEEMANGN------------------GEFGVV-----------CKPDAIT 165
+ + LF EM+ G+ V P+ IT
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y+ + GLC G ++KA + M+ ++ D+VTY +IRG C A + +A ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
QG+ P++ T+ +M L K G EA L M + G+ P+
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 6/223 (2%)
Query: 120 PDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
P + ++ L++ + + V + L+E+M G+ + T + + + C+ +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQ----MLGI--PHNLCTCNILLNCFCRCSQL 132
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
A KM P +VT+ SL+ GFC + +A +F +M+ G +PNVV +N I
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
++ LCK+ ++D A LL M + G+ PD YN+L+ G C +GR + A + M
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
DVF++ LI+ K + A Y EM+ + + P +VTY+
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%)
Query: 179 VDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNV 238
+D + +LF M P + ++ L+ ++ L+ +M G+ N+ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 239 IMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
++N C+ ++ A L MI++G P + +L++GFC RV A +F M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 299 CMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+V Y +I+G CK+K+++ AL L + M GI P VVTYN+
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 6/337 (1%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
++ + P V S++ + + D V L + + GL P+ Y Y +I C++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
+++ ++R PD V +T+LI G C I A+ F ++ + PDV TYT
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
+I+G C+ G + A LF EM F +PD++T++ + +G CK G + A +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKN 246
M +P+VVTYT+LI G C D + A L EM G+QPN+ T+N I+N LCK+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 247 GKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSY 306
G ++EA +L+ G+ D Y TLMD +C +G +++A+E+ M G + ++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 307 GILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+L+NG+C + +E L + ML+KGI P T+N+
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Score = 201 bits (512), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 183/339 (53%), Gaps = 7/339 (2%)
Query: 4 FDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFC 63
F M+R P V + L K F ++S + PD+ TY +I+ FC
Sbjct: 339 FSEMIRQGILPDTVV-YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 64 KMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVF 123
++G + + + PD+VTFT LI G C + +A + + GC P+V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 124 TYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAK 183
TYTTLI+GLC+ G A L EM + + +P+ TY++I +GLCK G +++A
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 184 ELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNEL 243
+L + + +N D VTYT+L+ +C + + ++A+ + EM+ +G+QP +VTFNV+MN
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 244 CKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDV 303
C +G +++ +LL M+ G+ P+A+ +N+L+ +C+ + A ++ M S G D
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 304 FSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+Y L+ G+CK + ++ A L+ EM KG +V TY+
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 169/309 (54%), Gaps = 6/309 (1%)
Query: 35 TVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLI 94
T + +F+ +G+ ++ +YNI+I+ C++GR+ +L + +TPD +++++++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 95 KGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGE 154
G C + + L ++ G KP+ + Y ++I LCR A F EM
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--- 345
Query: 155 FGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDW 214
G++ PD + Y+T+ DG CK G + A + F +M +I PDV+TYT++I GFC D
Sbjct: 346 -GIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
EA LF EM +G++P+ VTF ++N CK G M +A R+ MIQ G P+ Y TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
+DG C G ++ A EL M G ++F+Y ++NG CK+ IE A+ L E + G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 335 RPTVVTYNT 343
VTY T
Sbjct: 523 NADTVTYTT 531
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V S+NI+ + + L + G PD+ +Y+ ++N +C+ G + + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
+ R P++ + S+I LC ++ EA F+++ G PD YTTLI+G C+ G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
A F EM + + PD +TY+ I G C+ G + +A +LF +M + + P
Sbjct: 366 DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
D VT+T LI G+C A +A + M+ G PNVVT+ +++ LCK G +D A+ LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
M +IG++P+ YN++++G C +G + A +L E+ G D +Y L++ YCK+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYN 342
E++ A + EML KG++PT+VT+N
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFN 565
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 165/332 (49%), Gaps = 8/332 (2%)
Query: 4 FDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFC 63
F Y + P V ++ + + LF + GL PD T+ LIN +C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 64 KMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVF 123
K G + F V ++++ +P+ VT+T+LI GLC E + A L ++ G +P++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 124 TYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-CKPDAITYSTITDGLCKEGFVDKA 182
TY +++NGLC++G+ EE GEF D +TY+T+ D CK G +DKA
Sbjct: 493 TYNSIVNGLCKSGN-------IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
+E+ +M + + P +VT+ L+ GFC + + L M+ +G+ PN TFN ++ +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
C + A+ + + M GV PD Y L+ G C + A LF M+ G
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
V +Y +LI G+ K K+ A ++ +M +G+
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 184/355 (51%), Gaps = 26/355 (7%)
Query: 4 FDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFC 63
FDYM+R P V N + G + D +SL++++ + ++Y++NILI CFC
Sbjct: 94 FDYMVRSRPFYTAV-DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 64 KMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRI---------------MEAAA 108
++S G++ + F PD VTF +L+ GLC E RI +EA A
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 109 LFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYST 168
LF ++ G P V T+ TLINGLC G + A L +M G G D +TY T
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKG-----LHIDVVTYGT 266
Query: 169 ITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQG 228
I +G+CK G A L KM++ +I PDVV Y+++I C ++A+ LF EM+++G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 229 VQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAK 288
+ PNV T+N +++ C G+ +A RLL MI+ + PD +N L+ G++ A+
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 289 ELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+L M D +Y +I G+CK+ + A ++ M S P VVT+NT
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 170/329 (51%), Gaps = 10/329 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ PD +TF +LI E ++ EA L ++ PD TY ++I G C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
A ++F+ MA+ PD +T++TI D C+ VD+ +L ++ +
Sbjct: 414 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ TY +LI GFC ++ N A+ LF EM+ GV P+ +T N+++ C+N K++EA
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L E++ + D YN ++ G C +V+ A +LF S+ +G DV +Y ++I+G+C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I A L+ +M G P TYNT
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 139/291 (47%), Gaps = 10/291 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +FN L K L + +FPD TYN +I FCK R F
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDD 419
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ +PD VTF ++I C R+ E L ++ G + TY TLI+G C
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ A +LF+EM + VC PD IT + + G C+ +++A ELF ++ I
Sbjct: 480 VDNLNAAQDLFQEMISHG-----VC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ D V Y +I G C + +EA LF + GV+P+V T+NV+++ C + +A+
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFS 305
L M G PD S YNTL+ G G ++++ EL M SNG D F+
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++N + K+ +D +F + S PD+ T+N +I+ +C+ RV G +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L I R + T+ +LI G C + A LF ++ + G PD T L+ G C
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
AL LFE + + D + Y+ I G+CK VD+A +LF + +
Sbjct: 515 NEKLEEALELFEVIQMSKIDL------DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PDV TY +I GFC + ++A LF +M D G +P+ T+N ++ K G++D++
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRA 287
L+ M G DA + D GR++++
Sbjct: 629 LISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 11 HPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSP 70
H P + NIL +N+ + L LF+ + + D YNI+I+ CK +V
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 71 GFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLIN 130
+ + + PD T+ +I G C +S I +A LF K++ G +PD TY TLI
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 131 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
G + G ++ L EM NG G DA T + D L +G +DK+
Sbjct: 616 GCLKAGEIDKSIELISEM-RSNGFSG-----DAFTIKMVAD-LITDGRLDKS 660
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
L +H P V ++N++ LF ++ G PD TYN LI K G
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRI 103
+ ++ + + F+ DA T ++ L + R+
Sbjct: 623 IDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRL 657
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 201 bits (511), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 188/345 (54%), Gaps = 10/345 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNS---IGLFPDLYTYNI 57
F +F M +P P + FN + +AK + YD V++L+KR+ + I + PDLYT NI
Sbjct: 70 FHLFVLMAYSYP-LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNI 128
Query: 58 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFG 117
L+NCFC+ + S LG++++ PD VT +SL+ G C + I +A + ++ G
Sbjct: 129 LVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMG 188
Query: 118 CKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEG 177
K DV T LI+ LC+ + AL + + M + P+ +TYS++ GLCK G
Sbjct: 189 IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSG 242
Query: 178 FVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFN 237
+ A+ +M + INP+V+T+++LI + ++ ++ M+ + PNV T++
Sbjct: 243 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 302
Query: 238 VIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESN 297
++ LC + ++DEA ++L+LMI G P+ Y+TL +GF + RV+ +L M
Sbjct: 303 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 362
Query: 298 GCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
G + S LI GY + +I+ AL ++ M S G+ P + +YN
Sbjct: 363 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYN 407
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRS 81
IL L KN+ L + KR+ G+ P++ TY+ LI CK GR++ L +
Sbjct: 198 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 257
Query: 82 CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVA 141
P+ +TF++LI ++ + +++ + P+VFTY++LI GLC A
Sbjct: 258 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 317
Query: 142 LNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTY 201
+ + + M + C P+ +TYST+ +G K VD +L M + + V+
Sbjct: 318 IKMLDLMISKG------CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 371
Query: 202 TSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQ 261
+LI+G+ A + A +F M G+ PN+ ++N+++ L NG++++A E M +
Sbjct: 372 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 431
Query: 262 IGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILI 310
D Y ++ G C V A +LF ++ D +Y I+I
Sbjct: 432 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 480
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 29/270 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +++ L L K+ ++S + P++ T++ LI+ + K G++S V
Sbjct: 226 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSV 285
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+++ P+ T++SLI GLC +R+ EA + + + GC P+V TY+TL NG +
Sbjct: 286 YKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFK 345
Query: 135 TGHTIVALNLFEEMANGN-------------------------GEFGVVCK----PDAIT 165
+ + L ++M G FG + P+ +
Sbjct: 346 SSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRS 405
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y+ + GL G V+KA F M+ + D++TYT +I G C A EA LF ++
Sbjct: 406 YNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLK 465
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEASRL 255
+ V+P+ + +++ EL + G EA L
Sbjct: 466 FKRVEPDFKAYTIMIAELNRAGMRTEADAL 495
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 38/183 (20%)
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMD-------- 250
+ Y ++R + +++A LF+ M P++V FN ++ + K D
Sbjct: 51 IDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR 110
Query: 251 ------------------------------EASRLLELMIQIGVRPDASVYNTLMDGFCL 280
A L M+++G+ PD ++L++GFCL
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 281 TGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVT 340
+ + A + ME G RDV ILI+ CKN+ + AL + M +GI P VVT
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 341 YNT 343
Y++
Sbjct: 231 YSS 233
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P S N L AK D V FK + G P ++TYNI+I+C CK G V +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ PD VT+ S+I G R+ + F +++ C+PDV TY LIN C+
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G + L + EM GNG KP+ ++YST+ D CKEG + +A + ++ M+ +
Sbjct: 345 FGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
P+ TYTSLI C + ++A L EM+ GV+ NVVT+ +++ LC +M EA
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L M GV P+ + YN L+ GF ++RA EL ++ G D+ YG I G C
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
++IE A + +EM GI+ + Y T
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 169/329 (51%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P F+ LF L + + F ++ +FP + N L++ F K+G+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++ + P T+ +I +C E + A LF +++ G PD TY ++I+G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G + FEEM + + C+PD ITY+ + + CK G + E + +MK +
Sbjct: 310 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
P+VV+Y++L+ FC +A +++M G+ PN T+ +++ CK G + +A R
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L M+Q+GV + Y L+DG C R+ A+ELF M++ G + ++ SY LI+G+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
K K ++ AL L +E+ +GI+P ++ Y T
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGT 512
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 42/365 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++N + K D + F+ + + PD+ TYN LINCFCK G++ G
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + P+ V++++L+ C E + +A + +R G P+ +TYT+LI+ C+
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G+ A L EM E+ VV TY+ + DGLC + +A+ELF KM +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVV------TYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
P++ +Y +LI GF A + + A L E+ +G++P+++ + + LC K++ A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
++ M + G++ ++ +Y TLMD + +G L M+ V ++ +LI+G C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 315 KNK------------------------------------EIEGALSLYSEMLSKGIRPTV 338
KNK ++E A +L+ +M+ KG+ P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 339 VTYNT 343
Y +
Sbjct: 649 TAYTS 653
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 163/361 (45%), Gaps = 42/361 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V S++ L K + + + +GL P+ YTY LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+L+ + VT+T+LI GLC R+ EA LF K+ G P++ +Y LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ AL L E+ G G KPD + Y T GLC ++ AK + +MK+ I
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMM----------------------------- 225
+ + YT+L+ + + + E L EM
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 226 -------DQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGF 278
D G+Q N F +++ LCK+ +++ A+ L E M+Q G+ PD + Y +LMDG
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 279 CLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTV 338
G V A L M G D+ +Y L+ G +++ A S EM+ +GI P
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 339 V 339
V
Sbjct: 719 V 719
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 5/276 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + +++ +T+L+ E L +++ + V T+ LI+GLC+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
A++ F ++N +FG+ + +A ++ + DGLCK+ V+ A LF +M + +
Sbjct: 590 NKLVSKAVDYFNRISN---DFGL--QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PD YTSL+ G + EA L +M + G++ +++ + ++ L ++ +A
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKEL 290
LE MI G+ PD + +++ G ++ A EL
Sbjct: 705 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%)
Query: 158 VCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEA 217
VC P + + L G +++A + F KMK + P + L+ F ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 218 KCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDG 277
K F +M+ G +P V T+N++++ +CK G ++ A L E M G+ PD YN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 278 FCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPT 337
F GR++ F M+ C DV +Y LIN +CK ++ L Y EM G++P
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 338 VVTYNT 343
VV+Y+T
Sbjct: 367 VVSYST 372
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 10/337 (2%)
Query: 9 RMHPSPPPVC--SFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
+M S +C +FN L L K L ++ G+ P+L+TYN+ I C+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
+ ++G ++ PD +T+ +LI GLC S+ EA K+ G +PD +TY
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPDAITYSTITDGLCKEGFVDKAKEL 185
TLI G C+ G +A E G+ F G V PD TY ++ DGLC EG ++A L
Sbjct: 326 TLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALAL 378
Query: 186 FLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCK 245
F + + I P+V+ Y +LI+G EA L EM ++G+ P V TFN+++N LCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 246 NGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFS 305
G + +A L+++MI G PD +N L+ G+ ++ A E+ M NG DV++
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 306 YGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
Y L+NG CK + E + Y M+ KG P + T+N
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 173/337 (51%), Gaps = 8/337 (2%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMG 66
++ P P + N+++G +K + + L K +N GL PD YTYN LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGG 335
Query: 67 RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYT 126
V ++G + + F PD T+ SLI GLC E A ALF + G KP+V Y
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 127 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELF 186
TLI GL G + A L EM+ E G++ P+ T++ + +GLCK G V A L
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 187 LKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKN 246
M + PD+ T+ LI G+ A + M+D GV P+V T+N ++N LCK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 247 GKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSY 306
K ++ + M++ G P+ +N L++ C +++ A L M++ D ++
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 307 GILINGYCKNKEIEGALSLYSEMLSK-GIRPTVVTYN 342
G LI+G+CKN +++GA +L+ +M + + TYN
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 178/394 (45%), Gaps = 66/394 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR------- 67
P V S+N + L + ++D ++ R+ G+ PD+Y++ I + FCK R
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 68 ----------------------------VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCA 99
+ G+ + G++L S + TF L++ LC
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 100 ESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALN----LFEE------MA 149
+ + E L K+ G P++FTY I GLC+ G A+ L E+ +
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 150 NGNGEFGVVCK--------------------PDAITYSTITDGLCKEGFVDKAKELFLKM 189
N +G +CK PD+ TY+T+ G CK G V A+ +
Sbjct: 289 YNNLIYG-LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 190 KDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKM 249
PD TY SLI G C+ + N A LF E + +G++PNV+ +N ++ L G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 250 DEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGIL 309
EA++L M + G+ P+ +N L++G C G V+ A L M S G D+F++ IL
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 310 INGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
I+GY ++E AL + ML G+ P V TYN+
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 163/326 (50%), Gaps = 7/326 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N L L+ L ++ GL P++ T+NIL+N CKMG VS +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ ++ + PD TF LI G + ++ A + + G PDV+TY +L+NGLC+
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
T + ++ M C P+ T++ + + LC+ +D+A L +MK++++
Sbjct: 509 TSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQ-GVQPNVVTFNVIMNELCKNGKMDEAS 253
NPD VT+ +LI GFC D + A LF +M + V + T+N+I++ + + A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGY 313
+L + M+ + PD Y ++DGFC TG VN + + M NG + + + G +IN
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 314 CKNKEIEGALSLYSEMLSKGIRPTVV 339
C + A + M+ KG+ P V
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 8/309 (2%)
Query: 36 VLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIK 95
+++F+R++ P +++YN +++ G V R+ TPD +FT +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 96 GLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEM-ANGNGE 154
C SR A L + + GC+ +V Y T++ G LF +M A+G
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS- 213
Query: 155 FGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDW 214
+C T++ + LCK+G V + ++L K+ + P++ TY I+G C +
Sbjct: 214 ---LCLS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
+ A + +++QG +P+V+T+N ++ LCKN K EA L M+ G+ PD+ YNTL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
+ G+C G V A+ + NG + D F+Y LI+G C E AL+L++E L KGI
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 335 RPTVVTYNT 343
+P V+ YNT
Sbjct: 388 KPNVILYNT 396
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +FNIL L K L K + S G FPD++T+NILI+ + ++ +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L +L + PD T+ SL+ GLC S+ + + + GC P++FT+ L+ LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMK---- 190
AL L EEM N + PDA+T+ T+ DG CK G +D A LF KM+
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 191 --------------------------------DENINPDVVTYTSLIRGFCYANDWNEAK 218
D + PD TY ++ GFC + N
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 219 CLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMD 276
+EMM+ G P++ T ++N LC ++ EA+ ++ M+Q G+ P+A NT+ D
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA--VNTICD 713
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 165 TYSTITDGLCKEGFVDKAKELFLKMKDENINPDVV--TYTSLIRGFCYANDWNEAKCLFI 222
TY ++ + L G + +E+ + M+ EN+ ++ Y ++ + EA +F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 223 EMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTG 282
M +P V ++N IM+ L +G D+A ++ M G+ PD + M FC T
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS 160
Query: 283 RVNRAKELFVSMESNGCMRDVFSYGILING-YCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
R + A L +M S GC +V +Y ++ G Y +N + EG L+ +ML+ G+ + T+
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTF 219
Query: 342 N 342
N
Sbjct: 220 N 220
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 181 KAKELFLKMKDE-NINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQ-GVQPNVVTFNV 238
KA E+F M+ E + TY S+I Y + + + ++M + G +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 239 IMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
M + GK+ EA + E M P YN +M +G ++A ++++ M G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 299 CMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
DV+S+ I + +CK AL L + M S+G VV Y T
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 181/344 (52%), Gaps = 11/344 (3%)
Query: 4 FDYM----LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILI 59
+DY+ + M+ SP + SFN++ L K + D + +F+ + PD YTY L+
Sbjct: 171 YDYVVNSNMNMNISPNGL-SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 60 NCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCK 119
+ CK R+ ++L + +P V + LI GLC + + L + GC
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 120 PDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
P+ TY TLI+GLC G A++L E M + C P+ +TY T+ +GL K+
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQRRA 343
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
A L M++ + + Y+ LI G EA L+ +M ++G +PN+V ++V+
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
++ LC+ GK +EA +L MI G P+A Y++LM GF TG A +++ M+ GC
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
R+ F Y +LI+G C ++ A+ ++S+ML+ GI+P V Y++
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 178/344 (51%), Gaps = 10/344 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+ D M SP PV +N+L L K V L + G P+ TYN LI+
Sbjct: 244 LLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C G++ +L R++ S P+ VT+ +LI GL + R +A L + + G +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
Y+ LI+GL + G A++L+ +MA CKP+ + YS + DGLC+EG ++A
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKG------CKPNIVVYSVLVDGLCREGKPNEA 416
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
KE+ +M P+ TY+SL++GF EA ++ EM G N ++V+++
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSM---ESNGC 299
LC G++ EA + M+ IG++PD Y++++ G C G ++ A +L+ M E
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
DV +Y IL++G C K+I A+ L + ML +G P V+T NT
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 79
+++L L K + +SL++++ G P++ Y++L++ C+ G+ + +L R++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 80 RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTI 139
S P+A T++SL+KG EA ++ ++ GC + F Y+ LI+GLC G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 140 VALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKM---KDENINP 196
A+ ++ +M + KPD + YS+I GLC G +D A +L+ +M ++ P
Sbjct: 485 EAMMVWSKM------LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR-- 254
DVVTY L+ G C D + A L M+D+G P+V+T N +N L + + R
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L EL++++ R S G C V K L ++ +++ C
Sbjct: 599 LEELVVRLLKRQRVS-------GACTIVEVMLGKYLAPKTS---------TWAMIVREIC 642
Query: 315 KNKEIEGAL 323
K K+I A+
Sbjct: 643 KPKKINAAI 651
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 3/230 (1%)
Query: 105 EAAALFTKL-RAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDA 163
+A LF ++ F CK V ++ +++N + G L ++ + N N + P+
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187
Query: 164 ITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIE 223
++++ + LCK FVD+A E+F M + PD TY +L+ G C +EA L E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 224 MMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGR 283
M +G P+ V +NV+++ LCK G + ++L++ M G P+ YNTL+ G CL G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 284 VNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKG 333
+++A L M S+ C+ + +YG LING K + A+ L S M +G
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 183/356 (51%), Gaps = 21/356 (5%)
Query: 3 IFDYMLRMHPS---------------PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIG 47
+ D M++++P+ P V FNIL K + +F +
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 48 LFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAA 107
L P + ++N LIN +CK+G + GF + ++ +S PD T+++LI LC E+++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 108 ALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYS 167
LF ++ G P+ +TTLI+G R G + +++M + +PD + Y+
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG------LQPDIVLYN 384
Query: 168 TITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQ 227
T+ +G CK G + A+ + M + PD +TYT+LI GFC D A + EM
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN 444
Query: 228 GVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRA 287
G++ + V F+ ++ +CK G++ +A R L M++ G++PD Y +MD FC G
Sbjct: 445 GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 288 KELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+L M+S+G + V +Y +L+NG CK +++ A L ML+ G+ P +TYNT
Sbjct: 505 FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 9/285 (3%)
Query: 60 NCFCKMGRVSPGFVVLG---RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAF 116
N +M +++P + G IL + F + F L+ C E I +A +F ++
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 117 GCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKE 176
+P V ++ TLING C+ G+ L +M +PD TYS + + LCKE
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR------TRPDVFTYSALINALCKE 323
Query: 177 GFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTF 236
+D A LF +M + P+ V +T+LI G + + K + +M+ +G+QP++V +
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 237 NVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMES 296
N ++N CKNG + A +++ MI+ G+RPD Y TL+DGFC G V A E+ M+
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Query: 297 NGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
NG D + L+ G CK + A EML GI+P VTY
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 143/297 (48%), Gaps = 9/297 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +++ L L K D LF + GL P+ + LI+ + G +
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
++L PD V + +L+ G C ++ A + + G +PD TYTTLI+G CR
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G AL + +EM E D + +S + G+CKEG V A+ +M I
Sbjct: 428 GGDVETALEIRKEMDQNGIEL------DRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PD VTYT ++ FC D L EM G P+VVT+NV++N LCK G+M A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
LL+ M+ IGV PD YNTL++G R + + ++ G + D+ SY ++N
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIVADLASYKSIVN 595
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 6/302 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V SFN L K + D L ++ PD++TY+ LIN CK ++ +
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + P+ V FT+LI G I + K+ + G +PD+ Y TL+NG C+
Sbjct: 333 FDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G + A N+ + M +PD ITY+T+ DG C+ G V+ A E+ +M I
Sbjct: 393 NGDLVAARNIVDGMIRRG------LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
D V +++L+ G C +A+ EM+ G++P+ VT+ ++M+ CK G +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
LL+ M G P YN L++G C G++ A L +M + G + D +Y L+ G+
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHH 566
Query: 315 KN 316
++
Sbjct: 567 RH 568
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 175/329 (53%), Gaps = 7/329 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++ +L L ++ L ++ GL P++ TYN LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + +P+ T+ LIKG C +S + +A + K+ PDV TY +LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+G+ A L M + G+V PD TY+++ D LCK V++A +LF ++ + +
Sbjct: 475 SGNFDSAYRLLSLM----NDRGLV--PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
NP+VV YT+LI G+C A +EA + +M+ + PN +TFN +++ LC +GK+ EA+
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L E M++IG++P S L+ G + A F M S+G D +Y I YC
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ + A + ++M G+ P + TY++
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 185/388 (47%), Gaps = 65/388 (16%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 79
+N L LA+ D + ++ + + P++YTYN ++N +CK+G V + +I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 80 RSCFTPDAVTFTSL-----------------------------------IKGLCAESRIM 104
+ PD T+TSL I GLC RI
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 105 EAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGV------- 157
EA LF K++ C P V TYT LI LC + ALNL +EM + +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 158 -----VCK-----------------PDAITYSTITDGLCKEGFVDKAKELFLKMKDENIN 195
CK P+ ITY+ + +G CK G ++ A ++ M+ ++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 196 PDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRL 255
P+ TY LI+G+C +N ++A + +M+++ V P+VVT+N +++ C++G D A RL
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 256 LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCK 315
L LM G+ PD Y +++D C + RV A +LF S+E G +V Y LI+GYCK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 316 NKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+++ A + +MLSK P +T+N
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 162/329 (49%), Gaps = 7/329 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++ +L L ++ L+L K + G+ P+++TY +LI+ C + +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
LG++L P+ +T+ +LI G C I +A + + + P+ TY LI G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ N+ + M N PD +TY+++ DG C+ G D A L M D +
Sbjct: 441 S-------NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PD TYTS+I C + EA LF + +GV PNVV + +++ CK GK+DEA
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+LE M+ P++ +N L+ G C G++ A L M G V + ILI+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
K+ + + A S + +MLS G +P TY T
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 161/327 (49%), Gaps = 7/327 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L K + + + + + S L P+ TYN LI +CK V V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGV 449
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++L PD VT+ SLI G C A L + + G PD +TYT++I+ LC+
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ A +LF+ + + GV P+ + Y+ + DG CK G VD+A + KM +N
Sbjct: 510 SKRVEEACDLFDSLE----QKGV--NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
P+ +T+ +LI G C EA L +M+ G+QP V T ++++ L K+G D A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ M+ G +PDA Y T + +C GR+ A+++ M NG D+F+Y LI GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTY 341
+ A + M G P+ T+
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 12/313 (3%)
Query: 36 VLSLFKRLNSIGLFPDLYT-----YNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTF 90
VL L +++N F Y YN L+N + G V V +L P+ T+
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 91 TSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMAN 150
++ G C + EA +K+ G PD FTYT+LI G C+ A +F EM
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 151 GNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCY 210
C+ + + Y+ + GLC +D+A +LF+KMKD+ P V TYT LI+ C
Sbjct: 282 KG------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 211 ANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASV 270
+ +EA L EM + G++PN+ T+ V+++ LC K ++A LL M++ G+ P+
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 271 YNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEML 330
YN L++G+C G + A ++ MES + +Y LI GYCK+ + A+ + ++ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 331 SKGIRPTVVTYNT 343
+ + P VVTYN+
Sbjct: 455 ERKVLPDVVTYNS 467
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 156/378 (41%), Gaps = 60/378 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++N L ++ ++D+ L +N GL PD +TY +I+ CK RV +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + P+ V +T+LI G C ++ EA + K+ + C P+ T+ LI+GLC
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G A L E+M + +P T + + L K+G D A F +M
Sbjct: 580 DGKLKEATLLEEKMVK------IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMN------------- 241
PD TYT+ I+ +C +A+ + +M + GV P++ T++ ++
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 242 -------------------------------------ELCKNGKM---DEASRLLELMIQ 261
ELC M D LLE M++
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 262 IGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESN-GCMRDVFSYGILINGYCKNKEIE 320
V P+A Y L+ G C G + A+++F M+ N G + L++ CK K+
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 321 GALSLYSEMLSKGIRPTV 338
A + +M+ G P +
Sbjct: 814 EAAKVVDDMICVGHLPQL 831
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 24/329 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V + IL L K+ +D S F+++ S G PD +TY I +C+ GR+ +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ ++ + +PD T++SLIKG + A + ++R GC+P T+ +LI L
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL- 718
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
EM G + +P+ S + + D EL KM + ++
Sbjct: 719 ------------EMKYGKQKGS---EPELCAMSNMME-------FDTVVELLEKMVEHSV 756
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMM-DQGVQPNVVTFNVIMNELCKNGKMDEAS 253
P+ +Y LI G C + A+ +F M ++G+ P+ + FN +++ CK K +EA+
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGY 313
++++ MI +G P L+ G G R +F ++ G D ++ I+I+G
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 314 CKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
K +E L++ M G + + TY+
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+FD+M R P FN L C K K ++ + + +G P L + +LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
K G G V +L+ + D + + +I G+ + + LF + GCK
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 123 FTYTTLING 131
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 174/330 (52%), Gaps = 7/330 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + +F L L K + + + G P++YT+ LI+ CK G F +
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 75 LGRILRS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+++RS + P+ T+TS+I G C E ++ A LF++++ G P+V TYTTLING C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDEN 193
+ G + E+ N G+ G + P+ TY+ D LCK+ +A EL K
Sbjct: 405 KAG----SFGRAYELMNLMGDEGFM--PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEAS 253
+ D VTYT LI+ C ND N+A F M G + ++ N+++ C+ KM E+
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGY 313
RL +L++ +G+ P Y +++ +C G ++ A + F +M+ +GC+ D F+YG LI+G
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 314 CKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
CK ++ A LY M+ +G+ P VT T
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 5/297 (1%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEA 106
G PD T +++ C+ G V+ +++ F P+ + FTSLI GLC + I +A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 107 AALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITY 166
+ ++ G KP+V+T+T LI+GLC+ G T A LF ++ + KP+ TY
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----TYKPNVHTY 361
Query: 167 STITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMD 226
+++ G CKE +++A+ LF +MK++ + P+V TYT+LI G C A + A L M D
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 227 QGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNR 286
+G PN+ T+N ++ LCK + EA LL G+ D Y L+ C +N+
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 287 AKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
A F M G D+ ILI +C+ K+++ + L+ ++S G+ PT TY +
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 154/298 (51%), Gaps = 9/298 (3%)
Query: 38 SLFKRLNSIGLFPDLYTYNIL-INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKG 96
++F ++ G+ PD +Y ++ I CF + G++ L +++ F PD T T ++
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 261
Query: 97 LCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFG 156
LC + A F K+ G KP++ +T+LI+GLC+ G A + EEM NG
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG--- 317
Query: 157 VVCKPDAITYSTITDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSLIRGFCYANDWN 215
KP+ T++ + DGLCK G+ +KA LFLK+ + + P+V TYTS+I G+C + N
Sbjct: 318 --WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375
Query: 216 EAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLM 275
A+ LF M +QG+ PNV T+ ++N CK G A L+ LM G P+ YN +
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 276 DGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKG 333
D C R A EL S G D +Y ILI CK +I AL+ + M G
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 7/287 (2%)
Query: 58 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFG 117
++ F ++GR++ ++ + TP ++T +++ I A +F ++ G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 118 CKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEG 177
PD +Y ++ G R G A + G + G + PD T + I LC+ G
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENG 266
Query: 178 FVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFN 237
V++A F KM D P+++ +TSLI G C +A + EM+ G +PNV T
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 238 VIMNELCKNGKMDEASRL-LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMES 296
+++ LCK G ++A RL L+L+ +P+ Y +++ G+C ++NRA+ LF M+
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 297 NGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
G +V +Y LING+CK A L + M +G P + TYN
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 145/340 (42%), Gaps = 9/340 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
F +F ++R P V ++ + G K + LF R+ GLFP++ TY LIN
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
CK G + ++ + F P+ T+ + I LC +SR EA L K + G +
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
D TYT LI C+ AL F M E D + + C++ +
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE------ADMRLNNILIAAFCRQKKMK 515
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
+++ LF + + P TYTS+I +C D + A F M G P+ T+ ++
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
+ LCK +DEA +L E MI G+ P TL +C A L ++ +
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWI 635
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVT 340
R V + L+ C K++ A + ++L K VT
Sbjct: 636 RTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 672
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 92 SLIKGLCAESRIMEA------AALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVA--LN 143
+++ L +ES M A A F K R F V + L NG + H ++ L
Sbjct: 96 TVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLR 155
Query: 144 LFEEMANGNGEFGVV-------CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
F E+ N G+V P +IT + + + + G ++ A+ +F +M + P
Sbjct: 156 NFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVP 215
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
D +Y ++ G EA M+ +G P+ T +I+ LC+NG ++ A
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
MI +G +P+ + +L+DG C G + +A E+ M NG +V+++ LI+G CK
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 317 KEIEGALSLYSEML-SKGIRPTVVTYNT 343
E A L+ +++ S +P V TY +
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 168/331 (50%), Gaps = 11/331 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFV 73
PP + +F ++ D+ LSL + + G P+ Y LI+ K RV+
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 74 VLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
+L + PDA TF +I GLC RI EAA + ++ G PD TY L+NGLC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 134 RTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKM-KDE 192
+ G A +LF + KP+ + ++T+ G G +D AK + M
Sbjct: 334 KIGRVDAAKDLFYRIP----------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 193 NINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEA 252
I PDV TY SLI G+ A + +M ++G +PNV ++ ++++ CK GK+DEA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 253 SRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILING 312
+L M G++P+ +N L+ FC R+ A E+F M GC DV+++ LI+G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 313 YCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
C+ EI+ AL L +M+S+G+ VTYNT
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 175/328 (53%), Gaps = 6/328 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P VC++N L K L + + + G P++Y+Y IL++ FCK+G++ + V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + P+ V F LI C E RI EA +F ++ GCKPDV+T+ +LI+GLC
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
AL L +M + GVV + +TY+T+ + + G + +A++L +M +
Sbjct: 507 VDEIKHALWLLRDMISE----GVVA--NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
D +TY SLI+G C A + ++A+ LF +M+ G P+ ++ N+++N LC++G ++EA
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ M+ G PD +N+L++G C GR+ +F +++ G D ++ L++ C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYN 342
K + A L E + G P T++
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Score = 184 bits (467), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 170/331 (51%), Gaps = 13/331 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++ L L K D LF R+ P++ +N LI+ F GR+ V
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 75 LGRILRS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLC 133
L ++ S PD T+ SLI G E + A + +R GCKP+V++YT L++G C
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 134 RTGHTIVALNLFEEM-ANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDE 192
+ G A N+ EM A+G KP+ + ++ + CKE + +A E+F +M +
Sbjct: 436 KLGKIDEAYNVLNEMSADG-------LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 193 NINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEA 252
PDV T+ SLI G C ++ A L +M+ +GV N VT+N ++N + G++ EA
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 253 SRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILING 312
+L+ M+ G D YN+L+ G C G V++A+ LF M +G S ILING
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 313 YCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
C++ +E A+ EM+ +G P +VT+N+
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 163/332 (49%), Gaps = 6/332 (1%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPG 71
P P V ++ G + + D L + S G+ PD+ TYN LI + K G V
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 72 FVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLING 131
VL + P+ ++T L+ G C +I EA + ++ A G KP+ + LI+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 132 LCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKD 191
C+ A+ +F EM CKPD T++++ GLC+ + A L M
Sbjct: 469 FCKEHRIPEAVEIFREMPRKG------CKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 192 ENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDE 251
E + + VTY +LI F + EA+ L EM+ QG + +T+N ++ LC+ G++D+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 252 ASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILIN 311
A L E M++ G P N L++G C +G V A E M G D+ ++ LIN
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 312 GYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
G C+ IE L+++ ++ ++GI P VT+NT
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 159 CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAK 218
C+P +Y+ + + L A +F M I P + T+ +++ FC N+ + A
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 219 CLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGF 278
L +M G PN V + +++ L K +++EA +LLE M +G PDA +N ++ G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 279 CLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTV 338
C R+N A ++ M G D +YG L+NG CK ++ A L+ + +P +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEI 353
Query: 339 VTYNT 343
V +NT
Sbjct: 354 VIFNT 358
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 36/212 (16%)
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENI------------------------------- 194
Y + L G L ++MKDE I
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 195 -----NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKM 249
P +Y ++ N A +F +M+ + + P + TF V+M C ++
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 250 DEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGIL 309
D A LL M + G P++ +Y TL+ RVN A +L M GC+ D ++ +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 310 INGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
I G CK I A + + ML +G P +TY
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRL-LELM 259
Y LI ++ L I+M D+G+ F IM + K G + +RL LE+
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 260 IQIGVRPDASVYNTLMDGFCLTGRVNR-AKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
P YN +++ ++G ++ A +F M S +F++G+++ +C E
Sbjct: 174 NVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 319 IEGALSLYSEMLSKGIRPTVVTYNT 343
I+ ALSL +M G P V Y T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQT 257
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 4 FDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFC 63
F + + S P + +FN L L + + L++F++L + G+ PD T+N L++ C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 64 KMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRI 103
K G V ++L + F P+ T++ L++ + + +
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 173/319 (54%), Gaps = 6/319 (1%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 78
++ +L L KN +++++ G+FP+LYTYN ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 79 LRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHT 138
+ + VT+ +LI GLC E ++ EA + ++++ G P++ TY TLI+G C G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 139 IVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDV 198
AL+L ++ + P +TY+ + G C++G A ++ +M++ I P
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLEL 258
VTYT LI F +++ +A L + M + G+ P+V T++V+++ C G+M+EASRL +
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 259 MIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
M++ P+ +YNT++ G+C G RA +L ME +V SY +I CK ++
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 319 IEGALSLYSEMLSKGIRPT 337
+ A L +M+ GI P+
Sbjct: 529 SKEAERLVEKMIDSGIDPS 547
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 185/364 (50%), Gaps = 42/364 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P FN L + + ++ S F N + D+Y++ ILI C+ G + F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALF------------------------ 110
L + F+P+ V +T+LI G C + I +A LF
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 111 -----------TKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 159
K++ G P+++TY ++N LC+ G T A +F+EM E GV C
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR----ERGVSC 301
Query: 160 KPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKC 219
+ +TY+T+ GLC+E +++A ++ +MK + INP+++TY +LI GFC +A
Sbjct: 302 --NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 220 LFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFC 279
L ++ +G+ P++VT+N++++ C+ G A+++++ M + G++P Y L+D F
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 280 LTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVV 339
+ + +A +L +SME G + DV +Y +LI+G+C ++ A L+ M+ K P V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 340 TYNT 343
YNT
Sbjct: 480 IYNT 483
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 172/341 (50%), Gaps = 10/341 (2%)
Query: 4 FDYMLRMHP---SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
FD ++ + SP V ++ GC K + + LF + +GL + TY +LIN
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
K G GF + ++ P+ T+ ++ LC + R +A +F ++R G
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
++ TY TLI GLCR A + ++M + P+ ITY+T+ DG C G +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG------INPNLITYNTLIDGFCGVGKLG 355
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
KA L +K ++P +VTY L+ GFC D + A + EM ++G++P+ VT+ +++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
+ ++ M++A +L M ++G+ PD Y+ L+ GFC+ G++N A LF SM C
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+ Y +I GYCK AL L EM K + P V +Y
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 174/339 (51%), Gaps = 7/339 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+ Y+ S + ++ +++ + +S F + G P +N L+
Sbjct: 80 LLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV 139
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
+ + +S D +F LIKG C I ++ L +L FG P+V
Sbjct: 140 VGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNV 198
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
YTTLI+G C+ G A +LF EM G+ G+V + TY+ + +GL K G +
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEM----GKLGLVA--NERTYTVLINGLFKNGVKKQG 252
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
E++ KM+++ + P++ TY ++ C +A +F EM ++GV N+VT+N ++
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
LC+ K++EA+++++ M G+ P+ YNTL+DGFC G++ +A L ++S G
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+ +Y IL++G+C+ + GA + EM +GI+P+ VTY
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
F +FD M R + ++N L G L + + + ++ S G+ P+L TYN LI+
Sbjct: 288 FQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
FC +G++ + + +P VT+ L+ G C + AA + ++ G KP
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
TYT LI+ R+ + A+ L M E G+V PD TYS + G C +G ++
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSME----ELGLV--PDVHTYSVLIHGFCIKGQMN 460
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
+A LF M ++N P+ V Y ++I G+C A L EM ++ + PNV ++ ++
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASV 270
LCK K EA RL+E MI G+ P S+
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 236 FNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSME 295
+ VI+N ++ ++ + M+ G P ++ +N L+ + N+ F +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 296 SNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
S + DV+S+GILI G C+ EIE + L E+ G P VV Y T
Sbjct: 157 SKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 178/335 (53%), Gaps = 7/335 (2%)
Query: 9 RMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRV 68
M SP +IL G L + + +D+V ++ + S GL PD++ Y +L C K G
Sbjct: 157 EMKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 69 SPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTL 128
S +L + P+ +T I LC ++++ EA +F ++ G P+++TY+ +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 129 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLK 188
I+G C+TG+ A L++E+ P+ + + T+ DG CK + A+ LF+
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 189 MKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGK 248
M ++P++ Y LI G C + + EA L EM + P+V T+ +++N LC +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 249 MDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGI 308
+ EA+RL + M + P ++ YN+L+ G+C + +A +L M ++G ++ ++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 309 LINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
LI+GYC ++I+ A+ LY EM KGI P VVTY
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 41/362 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V + I L ++ + +F+ + G+ P+LYTY+ +I+ +CK G V + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
IL + P+ V F +L+ G C ++ A +LF + FG P+++ Y LI+G C+
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+G+ + A+ L EM + N PD TY+ + +GLC E V +A LF KMK+E I
Sbjct: 352 SGNMLEAVGLLSEMESLN------LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 195 -----------------------------------NPDVVTYTSLIRGFCYANDWNEAKC 219
P+++T+++LI G+C D A
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 220 LFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFC 279
L+ EM +G+ P+VVT+ +++ K M EA RL M++ G+ P+ + L+DGF
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 280 LTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVV 339
GR++ A + + + + LI G C+N I A +S+M S GI P +
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 340 TY 341
+Y
Sbjct: 586 SY 587
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 6/327 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V + +LF C K Y L + S+G+ P++Y Y I I C+ ++ +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ + P+ T++++I G C + +A L+ ++ P+V + TL++G C+
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ A +LF M +FGV P+ Y+ + G CK G + +A L +M+ N+
Sbjct: 317 ARELVTARSLFVHMV----KFGV--DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+PDV TYT LI G C + EA LF +M ++ + P+ T+N +++ CK M++A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L M GV P+ ++TL+DG+C + A L+ M G + DV +Y LI+ +
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTY 341
K ++ AL LYS+ML GI P T+
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTF 517
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 148/343 (43%), Gaps = 41/343 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V F L K + T SLF + G+ P+LY YN LI+ CK G + +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + +PD T+T LI GLC E ++ EA LF K++ P TY +LI+G C+
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ AL+L EM E P+ IT+ST+ DG C + A L+ +M + I
Sbjct: 422 EYNMEQALDLCSEMTASGVE------PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPN---------------------- 232
PDVVTYT+LI + EA L+ +M++ G+ PN
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 233 -------------VVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFC 279
V F ++ LC+NG + ASR M G+ PD Y +++ G
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 280 LTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGA 322
R+ L M G + ++ +L Y N ++ A
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 33/261 (12%)
Query: 114 RAFGCKPDVFTYTTLINGLCRTGH-------------------TIVALNLF--------- 145
R C PD +++NGL R + LF
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 146 ---EEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 202
E++ + G+ KP+ Y+ LC++ +++A+++F MK + P++ TY+
Sbjct: 216 SKKEKLLDEMTSLGI--KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 203 SLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQI 262
++I G+C + +A L+ E++ + PNVV F +++ CK ++ A L M++
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 263 GVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGA 322
GV P+ VYN L+ G C +G + A L MES DVF+Y ILING C ++ A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 323 LSLYSEMLSKGIRPTVVTYNT 343
L+ +M ++ I P+ TYN+
Sbjct: 394 NRLFQKMKNERIFPSSATYNS 414
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 2/203 (0%)
Query: 140 VALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVV 199
+ + LFEE + E C PD+ +I +GL + D + M + PDV
Sbjct: 143 LEMGLFEEALWVSREMK--CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 200 TYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELM 259
Y L + +++ + L EM G++PNV + + + +LC++ KM+EA ++ ELM
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 260 IQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEI 319
+ GV P+ Y+ ++DG+C TG V +A L+ + + +V +G L++G+CK +E+
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 320 EGALSLYSEMLSKGIRPTVVTYN 342
A SL+ M+ G+ P + YN
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYN 343
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 168/329 (51%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++N L + + L + G P +YTYN +IN CK G+ V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+LRS +PD+ T+ SL+ C + ++E +F+ +R+ PD+ ++++++ R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+G+ AL F N E G++ PD + Y+ + G C++G + A L +M +
Sbjct: 388 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
DVVTY +++ G C EA LF EM ++ + P+ T ++++ CK G + A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
L + M + +R D YNTL+DGF G ++ AKE++ M S + SY IL+N C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ A ++ EM+SK I+PTV+ N+
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 169/326 (51%), Gaps = 6/326 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V + NI+ L K+ + V + ++ G++PD+ TYN LI+ + G + F ++
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
+ F+P T+ ++I GLC + A +F ++ G PD TY +L+ C+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
+ +F +M + + PD + +S++ + G +DKA F +K+ + P
Sbjct: 355 DVVETEKVFSDMRSRD------VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
D V YT LI+G+C + A L EM+ QG +VVT+N I++ LCK + EA +L
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
M + + PD+ L+DG C G + A ELF M+ DV +Y L++G+ K
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYN 342
+I+ A ++++M+SK I PT ++Y+
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYS 554
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 9/341 (2%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M P VC F+ + ++ + D L F + GL PD Y ILI +
Sbjct: 362 VFSDMRSRDVVPDLVC-FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C+ G +S + +L+ D VT+ +++ GLC + EA LF ++ PD
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
+T T LI+G C+ G+ A+ LF++M + D +TY+T+ DG K G +D A
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKR------IRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
KE++ M + I P ++Y+ L+ C EA ++ EM+ + ++P V+ N ++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESN--GCM 300
C++G + LE MI G PD YNTL+ GF +++A L ME G +
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
DVF+Y +++G+C+ +++ A + +M+ +G+ P TY
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 165/323 (51%), Gaps = 6/323 (1%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR 80
N L G L + + +++ ++ G+ ++YT NI++N CK G++ L ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 81 SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIV 140
PD VT+ +LI ++ + EA L + G P V+TY T+INGLC+ G
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 141 ALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVT 200
A +F EM PD+ TY ++ CK+G V + +++F M+ ++ PD+V
Sbjct: 324 AKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
++S++ F + + ++A F + + G+ P+ V + +++ C+ G + A L M+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
Q G D YNT++ G C + A +LF M D ++ ILI+G+CK ++
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 321 GALSLYSEMLSKGIRPTVVTYNT 343
A+ L+ +M K IR VVTYNT
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNT 520
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 6/321 (1%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 79
F++L + + F L S G + N LI ++G V + V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 80 RSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTI 139
RS + T ++ LC + ++ + ++++ G PD+ TY TLI+ G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 140 VALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVV 199
A L M G G P TY+T+ +GLCK G ++AKE+F +M ++PD
Sbjct: 288 EAFELMNAMP-GKG-----FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 200 TYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELM 259
TY SL+ C D E + +F +M + V P++V F+ +M+ ++G +D+A +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 260 IQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEI 319
+ G+ PD +Y L+ G+C G ++ A L M GC DV +Y +++G CK K +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 320 EGALSLYSEMLSKGIRPTVVT 340
A L++EM + + P T
Sbjct: 462 GEADKLFNEMTERALFPDSYT 482
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 8/284 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V ++N + L K K LF + LFPD YT ILI+ CK+G + +
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
++ D VT+ +L+ G I A ++ + + P +Y+ L+N LC G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 137 HTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINP 196
H A +++EM + N KP + +++ G C+ G + KM E P
Sbjct: 565 HLAEAFRVWDEMISKN------IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQ--GVQPNVVTFNVIMNELCKNGKMDEASR 254
D ++Y +LI GF + ++A L +M ++ G+ P+V T+N I++ C+ +M EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNG 298
+L MI+ GV PD S Y +++GF + A + M G
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 181/400 (45%), Gaps = 77/400 (19%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKR-LNSIGL-FPDL----YTYN 56
+ ++++R++P + +L+ C +N L+L +R ++ +G FP+ + +
Sbjct: 69 VRNHLIRLNP----LAVVEVLYRC--RND-----LTLGQRFVDQLGFHFPNFKHTSLSLS 117
Query: 57 ILINCFCKMGRVSPGFVVLGRILR------------------SCFTPDAVTFTSLIKGLC 98
+I+ + GR+S L R++R +C + D+V F LI+
Sbjct: 118 AMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV-FDLLIRTYV 176
Query: 99 AESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 158
++ EA FT LR+ G + LI L R G +A +++E++ G+
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG--VGI- 233
Query: 159 CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAK 218
+ T + + + LCK+G ++K +++++ + PD+VTY +LI + EA
Sbjct: 234 ---NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 219 CLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGF 278
L M +G P V T+N ++N LCK+GK + A + M++ G+ PD++ Y +L+
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 279 CLTGRVNRAKELFVSMESN-----------------------------------GCMRDV 303
C G V +++F M S G + D
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 304 FSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
Y ILI GYC+ I A++L +EML +G VVTYNT
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 33/369 (8%)
Query: 7 MLRMHPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCK 64
M +M S P + ++N + K + + L + S G+ D+ TYN+LI+ C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 65 MGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFT 124
R++ G+++L + + P+ VT+ +LI G E +++ A+ L ++ +FG P+ T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 125 YTTLINGLCRTGHTIVALNLFEEM-ANG-----------------NGEFGV--------- 157
+ LI+G G+ AL +F M A G N EF +
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 158 ---VCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDW 214
VC ITY+ + DGLCK GF+D+A L +M + I+PD+VTY++LI GFC +
Sbjct: 396 RNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 215 NEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTL 274
AK + + G+ PN + ++ ++ C+ G + EA R+ E MI G D +N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Query: 275 MDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGI 334
+ C G+V A+E M S+G + + S+ LINGY + E A S++ EM G
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 335 RPTVVTYNT 343
PT TY +
Sbjct: 575 HPTFFTYGS 583
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 29/357 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +FNIL L ++ L +++ G P + TYN +++ +CK GR +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + D T+ LI LC +RI + L +R P+ TY TLING
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 135 TGHTIVALNLFEEMAN------------------GNGEFGVVCK-----------PDAIT 165
G ++A L EM + G F K P ++
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMM 225
Y + DGLCK D A+ +++MK + +TYT +I G C +EA L EM
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 226 DQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVN 285
G+ P++VT++ ++N CK G+ A ++ + ++G+ P+ +Y+TL+ C G +
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 286 RAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
A ++ +M G RD F++ +L+ CK ++ A M S GI P V+++
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 8/335 (2%)
Query: 9 RMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRV 68
R+ S P V ++IL + L +F+ + G P +YT N ++ K G
Sbjct: 117 RLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED 174
Query: 69 SPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTL 128
+ L +L+ PD TF LI LCAE +++ L K+ G P + TY T+
Sbjct: 175 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 234
Query: 129 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLK 188
++ C+ G A+ L + M + GV D TY+ + LC+ + K L
Sbjct: 235 LHWYCKKGRFKAAIELLDHMKSK----GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 189 MKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGK 248
M+ I+P+ VTY +LI GF A L EM+ G+ PN VTFN +++ G
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 249 MDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGI 308
EA ++ +M G+ P Y L+DG C + A+ ++ M+ NG +Y
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 309 LINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+I+G CKN ++ A+ L +EM GI P +VTY+
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 6/329 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V + N + G + K+ +V S K + + PD+ T+NILIN C G +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ ++ +S + P VT+ +++ C + R A L +++ G DV TY LI+ LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+ L +M + P+ +TY+T+ +G EG V A +L +M +
Sbjct: 276 SNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+P+ VT+ +LI G ++ EA +F M +G+ P+ V++ V+++ LCKN + D A
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 389
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
M + GV Y ++DG C G ++ A L M +G D+ +Y LING+C
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 449
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
K + A + + G+ P + Y+T
Sbjct: 450 KVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 9/338 (2%)
Query: 6 YMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKM 65
YM+ P S+ +L L KN +D + R+ G+ TY +I+ CK
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 66 GRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTY 125
G + V+L + + PD VT+++LI G C R A + ++ G P+ Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 126 TTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKE 184
+TLI CR G A+ ++E M G+ D T++ + LCK G V +A+E
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFNVLVTSLCKAGKVAEAEE 529
Query: 185 LFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELC 244
M + I P+ V++ LI G+ + + +A +F EM G P T+ ++ LC
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 245 KNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVF 304
K G + EA + L+ + + D +YNTL+ C +G + +A LF M + D +
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 305 SYGILINGYCKNKEIEGALSLYSEMLSKG-IRPTVVTY 341
+Y LI+G C+ + A+ E ++G + P V Y
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 11/343 (3%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+ + ML SP V +FN L ++ L +F + + GL P +Y +L++
Sbjct: 320 LLNEMLSFGLSPNHV-TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 63 CKMGR--VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKP 120
CK ++ GF + R+ R+ +T+T +I GLC + EA L ++ G P
Sbjct: 379 CKNAEFDLARGFYM--RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 121 DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVD 180
D+ TY+ LING C+ G A + + + V P+ I YST+ C+ G +
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRI------YRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 181 KAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIM 240
+A ++ M E D T+ L+ C A EA+ M G+ PN V+F+ ++
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 241 NELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCM 300
N +G+ +A + + M ++G P Y +L+ G C G + A++ S+ +
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Query: 301 RDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
D Y L+ CK+ + A+SL+ EM+ + I P TY +
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 11/327 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 78
+FN+L L K + + S G+ P+ +++ LIN + G F V +
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 79 LRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHT 138
+ P T+ SL+KGLC + EA L A D Y TL+ +C++G+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 139 IVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDE--NINP 196
A++LF EM + PD+ TY+++ GLC++G A LF K + N+ P
Sbjct: 630 AKAVSLFGEMVQRS------ILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLP 682
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQ-GVQPNVVTFNVIMNELCKNGKMDEASRL 255
+ V YT + G A W +A F E MD G P++VT N +++ + GK+++ + L
Sbjct: 683 NKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 256 LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCK 315
L M P+ + YN L+ G+ V+ + L+ S+ NG + D + L+ G C+
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 316 NKEIEGALSLYSEMLSKGIRPTVVTYN 342
+ +E L + + +G+ T+N
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFN 828
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 159/342 (46%), Gaps = 8/342 (2%)
Query: 1 FCIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILIN 60
F +FD M ++ P ++ L L K H K L+++ D YN L+
Sbjct: 563 FSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 61 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFG-CK 119
CK G ++ + G +++ PD+ T+TSLI GLC + + + A + A G
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 120 PDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
P+ YT ++G+ + G + E+M N + PD +T + + DG + G +
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMGKI 735
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
+K +L +M ++N P++ TY L+ G+ D + + L+ ++ G+ P+ +T + +
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
+ +C++ ++ ++L+ I GV D +N L+ C G +N A +L M S G
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
D + +++ +N + + + EM +GI P Y
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 12/297 (4%)
Query: 50 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAAL 109
P+L TYNIL++ + K VS F++ I+ + PD +T SL+ G+C ES ++E
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG-- 808
Query: 110 FTKLRAFGCKP---DVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITY 166
L+AF C+ D +T+ LI+ C G A +L + M + G+ D T
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKD--TC 862
Query: 167 STITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMD 226
+ L + +++ + +M + I+P+ Y LI G C D A + EM+
Sbjct: 863 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922
Query: 227 QGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNR 286
+ P V + ++ L K GK DEA+ LL M+++ + P + + TLM C G V
Sbjct: 923 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982
Query: 287 AKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
A EL V M + G D+ SY +LI G C ++ A LY EM G TY
Sbjct: 983 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKA 1039
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 7/276 (2%)
Query: 66 GRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTY 125
G+ S F L R C + +V + LI+ E I ++ +F + +G P V+T
Sbjct: 103 GKSSFVFGALMTTYRLCNSNPSV-YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 126 TTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKEL 185
++ + ++G + + +EM +C PD T++ + + LC EG +K+ L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215
Query: 186 FLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCK 245
KM+ P +VTY +++ +C + A L M +GV +V T+N+++++LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 246 NGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFS 305
+ ++ + LL M + + P+ YNTL++GF G+V A +L M S G + +
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 306 YGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+ LI+G+ + AL ++ M +KG+ P+ V+Y
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 128 LINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKPDAITYSTIT 170
++ +C T H +V A ++ +E++ +G+ FG + C + Y +
Sbjct: 71 IVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILI 130
Query: 171 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQ 230
+EG + + E+F M NP V T +++ + + EM+ + +
Sbjct: 131 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKIC 190
Query: 231 PNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKEL 290
P+V TFN+++N LC G +++S L++ M + G P YNT++ +C GR A EL
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 291 FVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
M+S G DV +Y +LI+ C++ I L +M + I P VTYNT
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 100/237 (42%), Gaps = 8/237 (3%)
Query: 107 AALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITY 166
AL T R P V Y LI R G +L +F M G +G P T
Sbjct: 110 GALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLM----GLYGF--NPSVYTC 161
Query: 167 STITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMD 226
+ I + K G +M I PDV T+ LI C + ++ L +M
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 221
Query: 227 QGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNR 286
G P +VT+N +++ CK G+ A LL+ M GV D YN L+ C + R+ +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 287 AKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
L M + +Y LING+ ++ A L +EMLS G+ P VT+N
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 11 HPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSP 70
H PP + + + LAK D L + + + L P + ++ L++ CK G V
Sbjct: 923 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982
Query: 71 GFVVLGRILRSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLI 129
+ L ++ +C D V++ LI GLCA+ + A L+ +++ G + TY LI
Sbjct: 983 A-LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Query: 130 NGL 132
GL
Sbjct: 1042 RGL 1044
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 174/341 (51%), Gaps = 6/341 (1%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F M+ P V + + L L K +H+ + LF + S+G+ PD+Y Y +I
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
C++ +S ++ + + + V + LI GLC + ++ EA + L KPDV
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY TL+ GLC+ + L + +EM + P S++ +GL K G +++A
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNE 242
L ++ D ++P++ Y +LI C ++EA+ LF M G++PN VT++++++
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 243 LCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRD 302
C+ GK+D A L M+ G++ YN+L++G C G ++ A+ M +
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 303 VFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
V +Y L+ GYC +I AL LY EM KGI P++ T+ T
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 170/334 (50%), Gaps = 9/334 (2%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
LR PS V S L L K + L+L KR+ G+ P+L+ YN LI+ CK +
Sbjct: 326 LRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
++ R+ + P+ VT++ LI C ++ A + ++ G K V+ Y +
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 128 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFL 187
LING C+ G A EM N E P +TY+++ G C +G ++KA L+
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 188 KMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG 247
+M + I P + T+T+L+ G A +A LF EM + V+PN VT+NV++ C+ G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
M +A L+ M + G+ PD Y L+ G CLTG+ + AK + C + Y
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
L++G+C+ ++E ALS+ EM+ +G+ +V Y
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 163/351 (46%), Gaps = 33/351 (9%)
Query: 16 PVCSFNILFGCLAKNK------------HY-------DTVLSLFKRLNSIGLFPDLYTYN 56
P FN+LF C K K HY D VL + + L P++ T +
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLS 196
Query: 57 ILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAF 116
L++ K + ++ PD +T +I+ LC + A + + A
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 117 GCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKE 176
GC ++ Y LI+GLC+ A+ + +++A G KPD +TY T+ GLCK
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA------GKDLKPDVVTYCTLVYGLCKV 310
Query: 177 GFVDKAKELFLKMKDE----NINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPN 232
+ E+ L+M DE +P +SL+ G EA L ++D GV PN
Sbjct: 311 ----QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 233 VVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFV 292
+ +N +++ LCK K EA L + M +IG+RP+ Y+ L+D FC G+++ A
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 293 SMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
M G V+ Y LING+CK +I A +EM++K + PTVVTY +
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 175/374 (46%), Gaps = 42/374 (11%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+FD M ++ P V +++IL + DT LS + GL +Y YN LIN
Sbjct: 389 LFDRMGKIGLRPNDV-TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK G +S + ++ P VT+TSL+ G C++ +I +A L+ ++ G P +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
+T+TTL++GL R G A+ LF EMA N KP+ +TY+ + +G C+EG + KA
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 183 KELFLKMKDENINPDV-----------------------------------VTYTSLIRG 207
E +M ++ I PD + YT L+ G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 208 FCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPD 267
FC EA + EM+ +GV ++V + V+++ K+ LL+ M G++PD
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 268 ASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYS 327
+Y +++D TG A ++ M + GC+ + +Y +ING CK + A L S
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 328 EMLSKGIRPTVVTY 341
+M P VTY
Sbjct: 742 KMQPVSSVPNQVTY 755
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 169/393 (43%), Gaps = 64/393 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + +F L L + + LF + + P+ TYN++I +C+ G +S F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + PD ++ LI GLC + EA L C+ + YT L++G CR
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 135 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPDAIT 165
G AL++ +EM + +VC KPD +
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCL----- 220
Y+++ D K G +A ++ M +E P+ VTYT++I G C A NEA+ L
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 221 -------------FIEMMDQG-----------------VQPNVVTFNVIMNELCKNGKMD 250
F++++ +G + N T+N+++ C+ G+++
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 251 EASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILI 310
EAS L+ MI GV PD Y T+++ C V +A EL+ SM G D +Y LI
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 311 NGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+G C E+ A L +EML +G+ P T T
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 164/322 (50%), Gaps = 6/322 (1%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR 80
N L L ++++++ S ++++ F + + + L+ C+ +M + F VL +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 81 SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIV 140
F + L+KGLC +A +L ++R PDVF+Y T+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 141 ALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVT 200
AL L EM G+G C +T+ + D CK G +D+A +MK + D+V
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 201 YTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMI 260
YTSLIRGFC + + K LF E++++G P +T+N ++ CK G++ EAS + E MI
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 261 QIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIE 320
+ GVRP+ Y L+DG C G+ A +L M + +Y I+IN CK+ +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 321 GALSLYSEMLSKGIRPTVVTYN 342
A+ + M + RP +TYN
Sbjct: 370 DAVEIVELMKKRRTRPDNITYN 391
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 170/329 (51%), Gaps = 8/329 (2%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVL 75
+ ++ IL K D + K + +GL DL Y LI FC G + G +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 76 GRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRT 135
+L +P A+T+ +LI+G C ++ EA+ +F + G +P+V+TYT LI+GLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 136 GHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENIN 195
G T AL L M + E P+A+TY+ I + LCK+G V A E+ MK
Sbjct: 331 GKTKEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 196 PDVVTYTSLIRGFCYANDWNEA-KCLFIEMMDQG-VQPNVVTFNVIMNELCKNGKMDEAS 253
PD +TY L+ G C D +EA K L++ + D P+V+++N +++ LCK ++ +A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGY 313
+ +L+++ D N L++ G VN+A EL+ + + +R+ +Y +I+G+
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 314 CKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
CK + A L +M ++P+V YN
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 166/327 (50%), Gaps = 13/327 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLG 76
V + NIL L +N +SL + + L PD+++YN +I FC+ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 77 RILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTG 136
+ S + VT+ LI C ++ EA +++ G + D+ YT+LI G C G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 137 HTIVALNLFEE-MANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENIN 195
LF+E + G+ P AITY+T+ G CK G + +A E+F M + +
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 196 PDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRL 255
P+V TYT LI G C EA L M+++ +PN VT+N+I+N+LCK+G + +A +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 256 LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSM--ESNGCMRDVFSYGILINGY 313
+ELM + RPD YN L+ G C G ++ A +L M +S+ DV SY LI+G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 314 CKNKEIEGALSLYS---EMLSKGIRPT 337
CK + AL +Y E L G R T
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVT 461
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 168/370 (45%), Gaps = 40/370 (10%)
Query: 2 CIFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
+FD +L SP + ++N L K +F+ + G+ P++YTY LI+
Sbjct: 268 ALFDEVLERGDSPCAI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
C +G+ +L ++ P+AVT+ +I LC + + +A + ++ +PD
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKE----- 176
TY L+ GLC G A L M + PD I+Y+ + GLCKE
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQ 442
Query: 177 ------------------------------GFVDKAKELFLKMKDENINPDVVTYTSLIR 206
G V+KA EL+ ++ D I + TYT++I
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 207 GFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRP 266
GFC N AK L +M +QP+V +N +++ LCK G +D+A RL E M + P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 267 DASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLY 326
D +N ++DG G + A+ L V M G D+F+Y LIN + K ++ A+S +
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 327 SEMLSKGIRP 336
+M+ G P
Sbjct: 623 DKMVDSGFEP 632
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGF 72
+ P V S+N L L K L ++ L D T NIL+N K G V+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 73 VVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGL 132
+ +I S ++ T+T++I G C + A L K+R +P VF Y L++ L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 133 CRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDE 192
C+ G A LFEEM N PD ++++ + DG K G + A+ L + M
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNN------FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 193 NINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEA 252
++PD+ TY+ LI F +EA F +M+D G +P+ + ++ G+ D+
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 253 SRLLELMIQIGVRPDASVYNTLMDGFC 279
+ L++ ++ + D + T+MD C
Sbjct: 654 TELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%)
Query: 197 DVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLL 256
+V + L++G C + +A L EM + P+V ++N ++ C+ ++++A L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 257 ELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKN 316
M G + L+D FC G+++ A M+ G D+ Y LI G+C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 317 KEIEGALSLYSEMLSKGIRPTVVTYNT 343
E++ +L+ E+L +G P +TYNT
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNT 287
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%)
Query: 224 MMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGR 283
M+ +G NV N+++ LC+N + +A LL M + + PD YNT++ GFC
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 284 VNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+ +A EL M+ +GC + ++GILI+ +CK +++ A+ EM G+ +V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
+R+ P V +N L L K D LF+ + FPD+ ++NI+I+ K G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
+ +L + R+ +PD T++ LI + EA + F K+ G +PD +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 128 LINGLCRTGHTIVALNLFEEMANGN 152
++ G T L +++ + +
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKD 664
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 177/338 (52%), Gaps = 11/338 (3%)
Query: 8 LRMHPSPPPVCSFNILFGC---LAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCK 64
++++ P V S+N L L N ++ K + + P+L T+NILI+ F K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 65 MGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFT 124
+ V +L P+ +++ SLI GLC +I EA ++ K+ + G +P++ T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 125 YTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKE 184
Y LING C+ AL++F + G G P Y+ + D CK G +D
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVK-GQGAV-----PTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 185 LFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELC 244
L +M+ E I PDV TY LI G C + AK LF ++ +G+ P++VTF+++M C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481
Query: 245 KNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMR-DV 303
+ G+ +A+ LL+ M ++G++P YN +M G+C G + A + ME +R +V
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 304 FSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
SY +L+ GY + ++E A L +EML KG+ P +TY
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 176/324 (54%), Gaps = 11/324 (3%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRS 81
++ L +N+ D V ++K + + P+++T+N++IN CK G+++ V+ +
Sbjct: 194 LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 82 CFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHT 138
+P+ V++ +LI G C ++ +A A+ ++ P++ T+ LI+G + +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 139 IVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDV 198
++ +F+EM + + KP+ I+Y+++ +GLC G + +A + KM + P++
Sbjct: 313 PGSMKVFKEMLDQD------VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 199 VTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLEL 258
+TY +LI GFC + EA +F + QG P +N++++ CK GK+D+ L E
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 259 MIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKE 318
M + G+ PD YN L+ G C G + AK+LF + S G + D+ ++ IL+ GYC+ E
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGE 485
Query: 319 IEGALSLYSEMLSKGIRPTVVTYN 342
A L EM G++P +TYN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYN 509
Score = 164 bits (416), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 10/325 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR 80
++L A N ++ FKR G + L+ K R + V ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 81 SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR---TGH 137
P+ TF +I LC ++ +A + ++ +GC P+V +Y TLI+G C+ G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 138 TIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPD 197
A + +EM + P+ T++ + DG K+ + + ++F +M D+++ P+
Sbjct: 277 MYKADAVLKEMVEND------VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 198 VVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLE 257
V++Y SLI G C +EA + +M+ GVQPN++T+N ++N CKN + EA +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 258 LMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNK 317
+ G P +YN L+D +C G+++ L ME G + DV +Y LI G C+N
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 318 EIEGALSLYSEMLSKGIRPTVVTYN 342
IE A L+ ++ SKG+ P +VT++
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFH 474
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 176/344 (51%), Gaps = 12/344 (3%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
++ M+R P V +FN++ L K + + + + G P++ +YN LI+ +
Sbjct: 210 VYKEMIR-RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 63 CKMG---RVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCK 119
CK+G ++ VL ++ + +P+ TF LI G + + + +F ++ K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 120 PDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
P+V +Y +LINGLC G A+++ ++M + GV +P+ ITY+ + +G CK +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDML 382
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
+A ++F +K + P Y LI +C ++ L EM +G+ P+V T+N +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
+ LC+NG ++ A +L + + G+ PD ++ LM+G+C G +A L M G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEM-LSKGIRPTVVTYN 342
+Y I++ GYCK ++ A ++ ++M + +R V +YN
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 151/296 (51%), Gaps = 8/296 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + +FNIL K+ + + +FK + + P++ +YN LIN C G++S +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+++ + P+ +T+ +LI G C + EA +F ++ G P Y LI+ C+
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G L EEM G+V PD TY+ + GLC+ G ++ AK+LF ++ + +
Sbjct: 414 LGKIDDGFALKEEME----REGIV--PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
PD+VT+ L+ G+C + +A L EM G++P +T+N++M CK G + A+
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 255 L-LELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGIL 309
+ ++ + +R + + YN L+ G+ G++ A L M G + + +Y I+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 8/234 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++N L KN L +F + G P YN+LI+ +CK+G++ GF +
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ R PD T+ LI GLC I A LF +L + G PD+ T+ L+ G CR
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKM-KDEN 193
G + A L +EM+ + G+ KP +TY+ + G CKEG + A + +M K+
Sbjct: 483 KGESRKAAMLLKEMS----KMGL--KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 194 INPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG 247
+ +V +Y L++G+ +A L EM+++G+ PN +T+ ++ E+ G
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
+F ML P V S+N L L +S+ ++ S G+ P+L TYN LIN F
Sbjct: 318 VFKEMLD-QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 63 CKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDV 122
CK + + G + P + LI C +I + AL ++ G PDV
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 123 FTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKA 182
TY LI GLCR G+ A LF+++ + PD +T+ + +G C++G KA
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-------LPDLVTFHILMEGYCRKGESRKA 489
Query: 183 KELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEM-MDQGVQPNVVTFNVIMN 241
L +M + P +TY +++G+C + A + +M ++ ++ NV ++NV++
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 242 ELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRV 284
+ GK+++A+ LL M++ G+ P+ Y + + G V
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 216 EAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLM 275
+ + ++ EM+ + +QPNV TFNV++N LCK GKM++A ++E M G P+ YNTL+
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 276 DGFCL---TGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK 332
DG+C G++ +A + M N ++ ++ ILI+G+ K+ + G++ ++ EML +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 333 GIRPTVVTYNT 343
++P V++YN+
Sbjct: 326 DVKPNVISYNS 336
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 166/342 (48%), Gaps = 20/342 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P +++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+ TP+ VT+T+LI ++ A LF + + GC P++ TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 135 TGHTIVALNLFEEMA---------------NGNGEFGVVCKPDAITYSTITDGLCKEGFV 179
G A +FE M + N E +P+ +TY + DG CK V
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE-----RPNVVTYGALLDGFCKSHRV 655
Query: 180 DKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVI 239
++A++L M E P+ + Y +LI G C +EA+ + EM + G + T++ +
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 240 MNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGC 299
++ K + D AS++L M++ P+ +Y ++DG C G+ + A +L ME GC
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+V +Y +I+G+ +IE L L M SKG+ P VTY
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 31/355 (8%)
Query: 11 HPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFC------K 64
+PSP FN L + + L K++ G P YNILI C
Sbjct: 369 YPSPKI---FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Query: 65 MGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFT 124
+ +L + + + +S + LC+ + +A ++ ++ G PD T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 125 YTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKE 184
Y+ ++N LC +A LFEEM G G+V D TY+ + D CK G +++A++
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRG----GLVA--DVYTYTIMVDSFCKAGLIEQARK 539
Query: 185 LFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELC 244
F +M++ P+VVTYT+LI + A + A LF M+ +G PN+VT++ +++ C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 245 KNGKMDEASRLLELMI----------------QIGVRPDASVYNTLMDGFCLTGRVNRAK 288
K G++++A ++ E M RP+ Y L+DGFC + RV A+
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 289 ELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+L +M GC + Y LI+G CK +++ A + +EM G T+ TY++
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 168/407 (41%), Gaps = 80/407 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G+V +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 75 LGRILRSCFTPDA----------------VTFTSLIKGLCAESRIMEAAALFTKLRAFGC 118
R+ S PD VT+ +L+ G C R+ EA L + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 119 KPDVFTYTTLINGLCRTGHTIVALNLFEEMANG-------------NGEFGV-------- 157
+P+ Y LI+GLC+ G A + EM+ + F V
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 158 --------VCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFC 209
C P+ + Y+ + DGLCK G D+A +L M+++ P+VVTYT++I GF
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 210 YANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQI------- 262
L M +GV PN VT+ V+++ CKNG +D A LLE M Q
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 263 GVR--------------------------PDASVYNTLMDGFCLTGRVNRAKELFVSMES 296
G R P SVY L+D R+ A L + +
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 297 -NGCMRDVFS-YGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+ + D S Y LI C ++E A L+SEM KG+ P + ++
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 156/370 (42%), Gaps = 50/370 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P ++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT------- 127
+ F PD V +T LI GLC S EA ++RA C P+V TY+T
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 128 ----------------------------LINGLCRTGHTIVALNLFEEMANGNGEFGVVC 159
L++ C +G A L ++M
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------ 403
Query: 160 KPDAITYSTITDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAND 213
P + Y+ + +C + +D A++ + +M + + + +S R C A
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 214 WNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNT 273
+ +A + EM+ QG P+ T++ ++N LC KM+ A L E M + G+ D Y
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 274 LMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKG 333
++D FC G + +A++ F M GC +V +Y LI+ Y K K++ A L+ MLS+G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 334 IRPTVVTYNT 343
P +VTY+
Sbjct: 584 CLPNIVTYSA 593
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 10/320 (3%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
+ M P ++ L L K D + ++ G LYTY+ LI+ + K+ R
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
VL ++L + P+ V +T +I GLC + EA L + GC+P+V TYT
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 128 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFL 187
+I+G G L L E M G GV P+ +TY + D CK G +D A L
Sbjct: 785 MIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 188 KMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG 247
+MK + Y +I GF ++ E+ L E+ P + + ++++ L K
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Query: 248 KMDEASRLLELMIQIGVR--PDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFS 305
+++ A RLLE + +S YN+L++ CL +V A +LF M G + ++ S
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 306 YGILINGYCKNKEIEGALSL 325
+ LI G +N +I AL L
Sbjct: 957 FCSLIKGLFRNSKISEALLL 976
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 149/359 (41%), Gaps = 32/359 (8%)
Query: 7 MLRMHPSPPPVCSFNILFGCLAKNKH----YDTVLSLFKRLNSIGLFPDLYTY------- 55
+LR+ P V SF + G KH Y+ ++ L R + + +
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKE 197
Query: 56 ------NILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAAL 109
N+L+ C+ G S LGR+ F P T+ LI+ R+ A+ +
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 110 FTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTI 169
++ + D FT LC+ G AL L E E V PD + Y+ +
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE------TENFV---PDTVFYTKL 308
Query: 170 TDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGV 229
GLC+ ++A + +M+ + P+VVTY++L+ G K + MM +G
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 230 QPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGR------ 283
P+ FN +++ C +G A +LL+ M++ G P VYN L+ C
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 284 VNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
++ A++ + M + G + + + C + E A S+ EM+ +G P TY+
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 11/231 (4%)
Query: 114 RAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPDAITYSTITDG 172
R G K Y L++ + R V +++ + + E FG + +
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRK 209
Query: 173 LCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPN 232
C+ G A E ++KD P TY LI+ F A+ + A + EM ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269
Query: 233 VVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFV 292
T LCK GK EA L+E PD Y L+ G C A +
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 293 SMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
M + C+ +V +Y L+ G K++ + + M+ +G P+ +N+
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLN--SIGLFPDLYTYNILINCFCKMGRVSP 70
+ P + + +L L K + + L L + + S L TYN LI C +V
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937
Query: 71 GFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGC 118
F + + + P+ +F SLIKGL S+I EA L + C
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 159/294 (54%), Gaps = 6/294 (2%)
Query: 50 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAAL 109
PD+ TYNILIN CK G+ L + P+ +++ LI+ C A+ L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 110 FTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTI 169
++ GCKPD+ TY LI+GL +GH A+N+ ++ + GV PDA Y+ +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR----GV--SPDAAIYNML 456
Query: 170 TDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGV 229
GLCK G AK LF +M D NI PD Y +LI GF + D++EA+ +F +++GV
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 230 QPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKE 289
+ +VV N ++ C++G +DEA + M + + PD Y+T++DG+ + A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 290 LFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+F ME N C +V +Y LING+C + + A + EM + + P VVTY T
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 183/371 (49%), Gaps = 31/371 (8%)
Query: 3 IFDYMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCF 62
I+DY++ ++ S P V + N L L K++ ++ + G D Y+ IL+
Sbjct: 156 IYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215
Query: 63 CKMGRVSPGF-VVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
C G+V G ++ GR + C P+ V + ++I G C I A +F +L+ G P
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPT 274
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------------------- 158
+ T+ T+ING C+ G + + L E+ V
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG 334
Query: 159 ------CKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYAN 212
CKPD TY+ + + LCKEG + A + + + P+ ++Y LI+ +C +
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 213 DWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYN 272
+++ A L ++M ++G +P++VT+ ++++ L +G MD+A + +I GV PDA++YN
Sbjct: 395 EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 273 TLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSK 332
LM G C TGR AK LF M + D + Y LI+G+ ++ + + A ++S + K
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Query: 333 GIRPTVVTYNT 343
G++ VV +N
Sbjct: 515 GVKVDVVHHNA 525
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 7/329 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V ++NIL L K + + + GL P+ +Y LI +CK +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L ++ PD VT+ LI GL + +A + KL G PD Y L++GLC+
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
TG + A LF EM + N PDA Y+T+ DG + G D+A+++F ++ +
Sbjct: 463 TGRFLPAKLLFSEMLDRN------ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
DVV + ++I+GFC + +EA M ++ + P+ T++ I++ K M A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ M + +P+ Y +L++GFC G A+E F M+ + +V +Y LI
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 315 KNKE-IEGALSLYSEMLSKGIRPTVVTYN 342
K +E A+ + M++ P VT+N
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFN 665
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 21/342 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + ++ IL L + H D +++ +L G+ PD YN+L++ CK GR P ++
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
+L PDA + +LI G EA +F+ G K DV + +I G CR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
+G AL M N E V PD TYSTI DG K+ + A ++F M+
Sbjct: 533 SGMLDEALACMNRM---NEEHLV---PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGK-MDEAS 253
P+VVTYTSLI GFC D+ A+ F EM + + PNVVT+ ++ L K +++A
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 254 RLLELMIQIGVRPDASVYNTLMDGFC--LTGRV-------NRAK-----ELFVSMESNGC 299
ELM+ P+ +N L+ GF +G+V N + E F M+S+G
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 300 MRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
+Y + C + ++ A +M+ KG P V++
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSF 748
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 173 LCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQ-- 230
L + ++ +++ +++EN+ + ++ + + ++A +E+ D V+
Sbjct: 109 LARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKA----VEIYDYVVELY 164
Query: 231 ---PNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRA 287
P+V+ N +++ L K+ ++ +A ++ + M G D L+ G C G+V
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 288 KELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
++L GC+ ++ Y +I GYCK +IE A ++ E+ KG PT+ T+ T
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 38 SLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGL 97
F R+ S G YN + C C G V + ++++ F+PD V+F +++ G
Sbjct: 696 EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Query: 98 C 98
C
Sbjct: 756 C 756
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 181/357 (50%), Gaps = 29/357 (8%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
+R + + S+NI L ++ + ++ K++ G+ P +Y+YNIL++ CK+G
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
+S ++G + R+ PDAVT+ L+ G C+ ++ A +L ++ C P+ +T
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 128 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFL 187
L++ L + G A L +M N G +G+ D +T + I DGLC G +DKA E+
Sbjct: 437 LLHSLWKMGRISEAEELLRKM-NEKG-YGL----DTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 188 KMK-----------------------DENINPDVVTYTSLIRGFCYANDWNEAKCLFIEM 224
M+ + N PD++TY++L+ G C A + EAK LF EM
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 225 MDQGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRV 284
M + +QP+ V +N+ ++ CK GK+ A R+L+ M + G YN+L+ G + ++
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 285 NRAKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTY 341
L M+ G ++ +Y I C+ +++E A +L EM+ K I P V ++
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 169/328 (51%), Gaps = 2/328 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P +FN+L L + D LF + G P+ +T+ IL+ +CK G G +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + P+ V + +++ C E R ++ + K+R G PD+ T+ + I+ LC+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKMKDENI 194
G + A +F +M E+ + +P++ITY+ + G CK G ++ AK LF +++ +
Sbjct: 265 EGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+ +Y ++G + EA+ + +M D+G+ P++ ++N++M+ LCK G + +A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
++ LM + GV PDA Y L+ G+C G+V+ AK L M N C+ + ++ IL++
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 315 KNKEIEGALSLYSEMLSKGIRPTVVTYN 342
K I A L +M KG VT N
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCN 470
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 163/338 (48%), Gaps = 10/338 (2%)
Query: 9 RMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRV 68
R + P V +N+L K + + V L+K + G+ P YT+N+LI C V
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCV 163
Query: 69 SPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTL 128
+ + P+ TF L++G C + L + +FG P+ Y T+
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 129 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLK 188
++ CR G + + E+M E G+V PD +T+++ LCKEG V A +F
Sbjct: 224 VSSFCREGRNDDSEKMVEKMR----EEGLV--PDIVTFNSRISALCKEGKVLDASRIFSD 277
Query: 189 MK-DENI---NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELC 244
M+ DE + P+ +TY +++GFC +AK LF + + ++ ++N+ + L
Sbjct: 278 MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLV 337
Query: 245 KNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVF 304
++GK EA +L+ M G+ P YN LMDG C G ++ AK + M+ NG D
Sbjct: 338 RHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397
Query: 305 SYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+YG L++GYC +++ A SL EM+ P T N
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 156/379 (41%), Gaps = 69/379 (18%)
Query: 17 VCSFNILFGCLAKN----KHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGF 72
VC + +GCL D SL + + P+ YT NIL++ KMGR+S
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 73 VVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFG--------------- 117
+L ++ + D VT ++ GLC + +A + +R G
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 118 --------CKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTI 169
C PD+ TY+TL+NGLC+ G A NLF EM G +PD++ Y+
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM------MGEKLQPDSVAYNIF 565
Query: 170 TDGLCKEGFVDKA-----------------------------------KELFLKMKDENI 194
CK+G + A L +MK++ I
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 195 NPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMDEASR 254
+P++ TY + I+ C +A L EMM + + PNV +F ++ CK D A
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 255 LLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILINGYC 314
+ E + I + + +Y+ + + G++ +A EL ++ G F Y L+ C
Sbjct: 686 VFETAVSICGQKEG-LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC 744
Query: 315 KNKEIEGALSLYSEMLSKG 333
K E+E A + +M+ +G
Sbjct: 745 KKDELEVASGILHKMIDRG 763
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 20/280 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P + +++ L L K + +LF + L PD YNI I+ FCK G++S F V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
L + + T+ SLI GL +++I E L +++ G P++ TY T I LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 135 TGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFLKM----- 189
A NL +EM N P+ ++ + + CK D A+E+F
Sbjct: 642 GEKVEDATNLLDEMMQKN------IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 190 KDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKM 249
+ E + Y+ + A +A L ++D+G + + ++ LCK ++
Sbjct: 696 QKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Query: 250 DEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKE 289
+ AS +L MI G D + ++DG G++ KE
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGL---GKMGNKKE 786
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%)
Query: 230 QPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKE 289
+P+V +N+++ K +++ S L + M+ G+ P +N L+ C + V+ A+E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 290 LFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
LF M GC + F++GIL+ GYCK + L L + M S G+ P V YNT
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 174 CKEGFVDKAKELFLKMKD---ENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQ 230
K +DKA F ++ EN P V Y L+ L+ +M+ G+
Sbjct: 86 AKSNHIDKAFPQFQLVRSRFPEN-KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIA 144
Query: 231 PNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKEL 290
P TFN+++ LC + +D A L + M + G +P+ + L+ G+C G ++ EL
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 291 FVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+MES G + + Y +++ +C+ + + + +M +G+ P +VT+N+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 14/332 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P +F+ILF + N+ + L +++ G+ + YT +IL+N CK G++ +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
LGR + P+ V + ++I G C + ++ A + G KPD Y LI C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 135 TGHTIVALNLFEEMANGNGEFGVV----CKPDAITYSTITDGLCKEGFVDKAKELFLKMK 190
G EM N E + P TY+ + G ++ DK ++ +M+
Sbjct: 437 LG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 191 DENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMD 250
D P+VV+Y +LI C + EA+ + +M D+GV P V +N++++ C GK++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 251 EASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILI 310
+A R + M++ G+ + YNTL+DG +TG+++ A++L + + G DVF+Y LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 311 NGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
+GY ++ ++LY EM GI+PT+ TY+
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 6/337 (1%)
Query: 6 YMLRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKM 65
+ LR P S +L L K K + +++F + P + Y I K+
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 66 GRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTY 125
V G + R+ P + LI GLC R+ +A LF ++ A P + TY
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 126 TTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKEL 185
TLI+G C+ G+ + + E M + E P IT++T+ GL K G V+ A+ +
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIE------PSLITFNTLLKGLFKAGMVEDAENV 306
Query: 186 FLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCK 245
+MKD PD T++ L G+ A ++ +D GV+ N T ++++N LCK
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 246 NGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFS 305
GK+++A +L + G+ P+ +YNT++DG+C G + A+ +ME G D +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 306 YGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
Y LI +C+ E+E A ++M KG+ P+V TYN
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 165/393 (41%), Gaps = 64/393 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGRVSPGFVV 74
P V +N+L L K K + LF + + L P L TYN LI+ +CK G F V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 75 LGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTTLINGLCR 134
R+ P +TF +L+KGL + +A + +++ G PD FT++ L +G
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 135 TGHTIVALNLFEEMANGNGE---------FGVVCK--------------------PDAIT 165
AL ++E + + +CK P+ +
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 166 YSTITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFC---------------- 209
Y+T+ DG C++G + A+ M+ + + PD + Y LIR FC
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 210 -----------------YANDWNEAKCLFI--EMMDQGVQPNVVTFNVIMNELCKNGKMD 250
Y + KC I EM D G PNVV++ ++N LCK K+
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 251 EASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILI 310
EA + M GV P +YN L+DG C G++ A M G ++ +Y LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 311 NGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
+G ++ A L E+ KG++P V TYN+
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 155/326 (47%), Gaps = 10/326 (3%)
Query: 8 LRMHPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINCFCKMGR 67
+++ P V ++NIL G + +D + K + G P++ +Y LINC CK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 68 VSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPDVFTYTT 127
+ +V + +P + LI G C++ +I +A ++ G + ++ TY T
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 128 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDKAKELFL 187
LI+GL TG A +L E++ KPD TY+++ G G V + L+
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 188 KMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNG 247
+MK I P + TY LI C + LF EM ++P+++ +N +++ +G
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679
Query: 248 KMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYG 307
M++A L + MI+ + D + YN+L+ G G++ + L M + + +Y
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 308 ILINGYCKNKEIEGALSLYSEMLSKG 333
I++ G+C+ K+ A Y EM KG
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 146/296 (49%), Gaps = 10/296 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEA 106
G+ P + TYNILI + + F +L + + P+ V++ +LI LC S+++EA
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 107 AALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITY 166
+ + G P V Y LI+G C G A +EM E +V TY
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV------TY 567
Query: 167 STITDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMD 226
+T+ DGL G + +A++L L++ + + PDV TY SLI G+ +A + L+ EM
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 227 QGVQPNVVTFNVIMNELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNR 286
G++P + T++++++ LC ++ RL ++ ++PD VYN ++ + + G + +
Sbjct: 628 SGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 287 AKELFVSMESNGCMRDVFSYGILINGYCKNKEIEGALSLYSEMLSKGIRPTVVTYN 342
A L M D +Y LI G K ++ SL EM ++ + P TYN
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 12/328 (3%)
Query: 4 FDYMLRMHP--SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYNILINC 61
FD + M + P V S+ L CL K + + + G+ P + YN+LI+
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 62 FCKMGRVSPGFVVLGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRAFGCKPD 121
C G++ F +L+ + VT+ +LI GL ++ EA L ++ G KPD
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 122 VFTYTTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDAITYSTITDGLCKEGFVDK 181
VFTY +LI+G G+ + L+EEM KP TY + KEG ++
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSG------IKPTLKTYHLLISLCTKEG-IEL 651
Query: 182 AKELFLKMKDENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMN 241
+ LF +M ++ PD++ Y ++ + D +A L +M+++ + + T+N ++
Sbjct: 652 TERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 242 ELCKNGKMDEASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMR 301
K GK+ E L++ M + P+A YN ++ G C A + M+ G +
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 302 DVFSYGILINGYCKNKEIEGALSLYSEM 329
DV L++G + + A + SEM
Sbjct: 769 DVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 48/333 (14%)
Query: 59 INCFCKMGRVSPGFVVLGRILRSCFTP--------DAVTFTS----------LIKGLCAE 100
+ + R+ VL +LRS TP A + +S L+ L E
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 101 SR-IMEAAALFTKLRAFGCKPDVFTYTTLINGLCRTGHTIVALNLFEEMANGNGE----- 154
S+ I EAA LF LR G P + T L++ L +T V +N+F + +
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 181
Query: 155 FGVVCK------------------------PDAITYSTITDGLCKEGFVDKAKELFLKMK 190
+G + P Y+ + DGLCK ++ A++LF +M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 191 DENINPDVVTYTSLIRGFCYANDWNEAKCLFIEMMDQGVQPNVVTFNVIMNELCKNGKMD 250
+ P ++TY +LI G+C A + ++ + M ++P+++TFN ++ L K G ++
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 251 EASRLLELMIQIGVRPDASVYNTLMDGFCLTGRVNRAKELFVSMESNGCMRDVFSYGILI 310
+A +L+ M +G PDA ++ L DG+ + A ++ + +G + ++ IL+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 311 NGYCKNKEIEGALSLYSEMLSKGIRPTVVTYNT 343
N CK +IE A + ++KG+ P V YNT
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,802,880
Number of Sequences: 539616
Number of extensions: 4981198
Number of successful extensions: 24893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 13880
Number of HSP's gapped (non-prelim): 3336
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)