BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040267
(538 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 43/311 (13%)
Query: 261 SLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL--G 318
+ L L + L L A+ NFS +N+L G YK L DG+++A+KRL + G
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 319 EKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSNGNT--ALDW 365
E QF E++ + + H NL E+ LVY YM+NG++ S L + LDW
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 366 PSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR-------- 417
P R RI LG+ARGL++ +++ ++ IL+DE+F+A + DFG ++
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 418 ----------------LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461
L+ G +S + DV G+GV+LLEL+TGQ+ F++ L++
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521
W+ L +++ ++D L G D+E+ Q +Q+A C P E+ M +V +
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV----VRML 314
Query: 522 EQLGFSEFYEE 532
E G +E +EE
Sbjct: 315 EGDGLAERWEE 325
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 43/311 (13%)
Query: 261 SLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL--G 318
+ L L + L L A+ NF +N+L G YK L DG ++A+KRL + G
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 319 EKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSNGNT--ALDW 365
E QF E++ + + H NL E+ LVY YM+NG++ S L + LDW
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 366 PSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR-------- 417
P R RI LG+ARGL++ +++ ++ IL+DE+F+A + DFG ++
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 418 ----------------LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461
L+ G +S + DV G+GV+LLEL+TGQ+ F++ L++
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521
W+ L +++ ++D L G D+E+ Q +Q+A C P E+ M +V +
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV----VRML 306
Query: 522 EQLGFSEFYEE 532
E G +E +EE
Sbjct: 307 EGDGLAERWEE 317
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSA-CKLGEKQFLLEMK 327
++ LV L AT+NF + ++ G YK +L DG+ +A+KR + G ++F E++
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 328 QVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLG 374
+ +HP+L E L+YKYM NG L L+ + ++ W RL I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 375 AARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR----------------- 417
AARGL + ++I+ IL+DE+F +I DFG S+
Sbjct: 148 AARGLHYLHTRAIIHRDVKSIN---ILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 418 --------LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469
G + + DV+ FGVVL E++ + + E NL W + ++
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV--NLAEWAVESHNN 262
Query: 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
G+++ ++D L K + + +F A KC+A+ +++ SM V
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSA-CKLGEKQFLLEMK 327
++ LV L AT+NF + ++ G YK +L DG+ +A+KR + G ++F E++
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 328 QVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLG 374
+ +HP+L E L+YKYM NG L L+ + ++ W RL I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 375 AARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR----------------- 417
AARGL + +++ S IL+DE+F +I DFG S+
Sbjct: 148 AARGLHYLHTRAIIH---RDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 418 --------LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469
G + + DV+ FGVVL E++ + + E NL W + ++
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV--NLAEWAVESHNN 262
Query: 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
G+++ ++D L K + + +F A KC+A+ +++ SM V
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 45/190 (23%)
Query: 294 GTTYKAMLLDGSMLAIKRLSA-----CKLGEKQFLLEMKQVGLLKHPNL----------- 337
G YK ++ + +A+K+L+A + ++QF E+K + +H NL
Sbjct: 45 GVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 103
Query: 338 EKPLVYKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNIS 396
+ LVY YM NG+L L +G L W R +I GAA G+++ ++I
Sbjct: 104 DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH---RDIK 160
Query: 397 SSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGF 432
S+ IL+DE F A+I DFG +R + G+ + + D++ F
Sbjct: 161 SANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSF 220
Query: 433 GVVLLELVTG 442
GVVLLE++TG
Sbjct: 221 GVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 45/190 (23%)
Query: 294 GTTYKAMLLDGSMLAIKRLSA-----CKLGEKQFLLEMKQVGLLKHPNL----------- 337
G YK ++ + +A+K+L+A + ++QF E+K + +H NL
Sbjct: 45 GVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 103
Query: 338 EKPLVYKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNIS 396
+ LVY YM NG+L L +G L W R +I GAA G+++ ++I
Sbjct: 104 DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH---RDIK 160
Query: 397 SSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGF 432
S+ IL+DE F A+I DFG +R + G+ + + D++ F
Sbjct: 161 SANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSF 220
Query: 433 GVVLLELVTG 442
GVVLLE++TG
Sbjct: 221 GVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 45/190 (23%)
Query: 294 GTTYKAMLLDGSMLAIKRLSA-----CKLGEKQFLLEMKQVGLLKHPNL----------- 337
G YK ++ + +A+K+L+A + ++QF E+K + +H NL
Sbjct: 39 GVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 97
Query: 338 EKPLVYKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNIS 396
+ LVY YM NG+L L +G L W R +I GAA G+++ ++I
Sbjct: 98 DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH---RDIK 154
Query: 397 SSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGF 432
S+ IL+DE F A+I DFG +R + G+ + + D++ F
Sbjct: 155 SANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSF 214
Query: 433 GVVLLELVTG 442
GVVLLE++TG
Sbjct: 215 GVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 45/190 (23%)
Query: 294 GTTYKAMLLDGSMLAIKRLSA-----CKLGEKQFLLEMKQVGLLKHPNL----------- 337
G YK + + + +A+K+L+A + ++QF E+K +H NL
Sbjct: 36 GVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGD 94
Query: 338 EKPLVYKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNIS 396
+ LVY Y NG+L L +G L W R +I GAA G+++ ++I
Sbjct: 95 DLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIH---RDIK 151
Query: 397 SSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGF 432
S+ IL+DE F A+I DFG +R + G+ + + D++ F
Sbjct: 152 SANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSF 211
Query: 433 GVVLLELVTG 442
GVVLLE++TG
Sbjct: 212 GVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEK---QFLLEMKQVGLLKHPNL--------EKP-- 340
GT ++A GS +A+K L + +FL E+ + L+HPN+ + P
Sbjct: 51 GTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 341 -LVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSS 398
+V +Y+S G+LY LLH +G LD RL + A+G+++ +N+ S
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH-RNLKSP 168
Query: 399 VILVDEDFDARIMDFGFSRLT-----------------------NGDASLQKDVHGFGVV 435
+LVD+ + ++ DFG SRL + ++ + DV+ FGV+
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 436 LLELVTGQKPF 446
L EL T Q+P+
Sbjct: 229 LWELATLQQPW 239
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEK---QFLLEMKQVGLLKHPNL--------EKP-- 340
GT ++A GS +A+K L + +FL E+ + L+HPN+ + P
Sbjct: 51 GTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 341 -LVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSS 398
+V +Y+S G+LY LLH +G LD RL + A+G+++ +++ S
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY-LHNRNPPIVHRDLKSP 168
Query: 399 VILVDEDFDARIMDFGFSRLT-----------------------NGDASLQKDVHGFGVV 435
+LVD+ + ++ DFG SRL + ++ + DV+ FGV+
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 436 LLELVTGQKPF 446
L EL T Q+P+
Sbjct: 229 LWELATLQQPW 239
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 47/214 (21%)
Query: 268 IKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMK 327
I + + LI N V + TW G T +AIK L + + FL E +
Sbjct: 6 IPRESLQLIKRLGNGQFGEVWMGTWNGNT---------KVAIKTLKPGTMSPESFLEEAQ 56
Query: 328 QVGLLKHPNL--------EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAAR 377
+ LKH L E+P+ V +YM+ G+L L AL P+ + + A
Sbjct: 57 IMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 378 GLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTN----------------- 420
G+++ +++ S+ ILV +I DFG +RL
Sbjct: 117 GMAYIERMNYIH---RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 421 -------GDASLQKDVHGFGVVLLELVT-GQKPF 446
G +++ DV FG++L ELVT G+ P+
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 26 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 133
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 194 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 226
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
+++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 23 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 130
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 191 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 223
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 199 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 306
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 199 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 306
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 22 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 129
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 190 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 24 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 131
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 192 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 224
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 199 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 306
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 282 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 389
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 482
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + ++H L
Sbjct: 33 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 140
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 200 EVWMGTWNGTT---------RVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YMS G+L L L P + + A G+++ +++
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---RDL 307
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG RL G +++ DV
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 368 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 400
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 30 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YM+ G+L L L P + + A G+++ +++
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH---RDL 137
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------- 337
V + TW GTT +AIK L + + FL E + + L+H L
Sbjct: 30 EVWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
E+P+ V +YM+ G+L L L P + + A G+++ +++
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH---RDL 137
Query: 396 SSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHG 431
++ ILV E+ ++ DFG +RL G +++ DV
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGYK 456
FG++L EL T G+ P+ ++ E GY+
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYR 230
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 329 VGLLKHPNLEKP-LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXX 387
+G + P P L+ +M G+LY++LH N +D ++ L ARG+++
Sbjct: 73 LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF-LHTLE 131
Query: 388 XXXXXQNISSSVILVDEDFDARI--MDFGFSRLTNG---------DASLQK--------- 427
++S +++DED ARI D FS + G +LQK
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRS 191
Query: 428 -DVHGFGVVLLELVTGQKPF 446
D+ F V+L ELVT + PF
Sbjct: 192 ADMWSFAVLLWELVTREVPF 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 35/195 (17%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK--------PL--VY 343
G + A + +A+K + + + FL E + L+H L K P+ +
Sbjct: 196 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT 255
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVD 403
++M+ G+L L S+ + P + A G+++ +++ ++ ILV
Sbjct: 256 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH---RDLRAANILVS 312
Query: 404 EDFDARIMDFGFSR--------------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE- 447
+I DFG +R + G +++ DV FG++L+E+VT G+ P+
Sbjct: 313 ASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 372
Query: 448 ------INASEEGYK 456
I A E GY+
Sbjct: 373 MSNPEVIRALERGYR 387
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 21 SFNDPQGKLSSWSLTNSSVGFIC------RFNGVSCWN---GLENRILSLELEEMNLSGQ 71
SFN+ G+L SLTN S + F+G N +N + L L+ +G+
Sbjct: 348 SFNEFSGELPE-SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 406
Query: 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHELGNCVYL 131
+P +L +C L L+LS N L G IP+ L L G IP EL L
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGS-LSKLRDLKLWLNMLEGEIPQELMYVKTL 465
Query: 132 NTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIP 170
TL L +N L S++ N L+G IP
Sbjct: 466 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 70 GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHELGNCV 129
G + + S+ L++S N L G IP ++ PYL G+IP E+G+
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLR 677
Query: 130 YLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIP 170
LN L LS N+ L + ++ N LSG IP
Sbjct: 678 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 37 SSVGFICRFNGVSCW-NGLENRIL----------SLELEEMNLSGQVPESLQSCKSLQVL 85
SS+G + + + W N LE I +L L+ +L+G++P L +C +L +
Sbjct: 433 SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 492
Query: 86 NLSTNNLFGKIPTQLCKW---FPYLVXXXXXXXXXXGTIPHELGNCVYLNTLYLSYN 139
+LS N L G+IP KW L G IP ELG+C L L L+ N
Sbjct: 493 SLSNNRLTGEIP----KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 57 RILSLELEEMNLSGQVPESLQS-CKSLQVLNLSTNNLFGKIPTQLCKWFP-YLVXXXXXX 114
++L L E SG++PESL + SL L+LS+NN G I LC+ L
Sbjct: 343 KVLDLSFNE--FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 400
Query: 115 XXXXGTIPHELGNCVYLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPS 171
G IP L NC L +L+LS+N LSG IPS
Sbjct: 401 NGFTGKIPPTLSNCSELVSLHLSFNY------------------------LSGTIPS 433
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGT 120
L++ LSG ++ +C L++LN+S+N G IP K YL G
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL---SLAENKFTGE 281
Query: 121 IPHEL-GNCVYLNTLYLSYNR 140
IP L G C L L LS N
Sbjct: 282 IPDFLSGACDTLTGLDLSGNH 302
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 19 IKSFNDPQGKLSSWSLTNSSVGFIC----RFNG-VSCWNGLENRILSLELEEMNLSGQVP 73
I FND G++ S +++ +I R G + W G + L+L + SG +P
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102
L C+SL L+L+TN G IP + K
Sbjct: 529 AELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
L L ++SG +P+ + + L +L+LS+N L G+IP +
Sbjct: 658 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 697
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIP 97
L+L L G++P+++ + L ++LS NNL G IP
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 34 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 93
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +N+ ++ ILV + +I DFG
Sbjct: 94 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RNLRAANILVSDTLSCKIADFG 150
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 151 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 210
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 211 TNPEVIQNLERGYR 224
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 21 SFNDPQGKLSSWSLTNSSVGFIC------RFNGVSCWN---GLENRILSLELEEMNLSGQ 71
SFN+ G+L SLTN S + F+G N +N + L L+ +G+
Sbjct: 351 SFNEFSGELPE-SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHELGNCVYL 131
+P +L +C L L+LS N L G IP+ L L G IP EL L
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGS-LSKLRDLKLWLNMLEGEIPQELMYVKTL 468
Query: 132 NTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIP 170
TL L +N L S++ N L+G IP
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 70 GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHELGNCV 129
G + + S+ L++S N L G IP ++ PYL G+IP E+G+
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLR 680
Query: 130 YLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIP 170
LN L LS N+ L + ++ N LSG IP
Sbjct: 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 37 SSVGFICRFNGVSCW-NGLENRIL----------SLELEEMNLSGQVPESLQSCKSLQVL 85
SS+G + + + W N LE I +L L+ +L+G++P L +C +L +
Sbjct: 436 SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 495
Query: 86 NLSTNNLFGKIPTQLCKW---FPYLVXXXXXXXXXXGTIPHELGNCVYLNTLYLSYN 139
+LS N L G+IP KW L G IP ELG+C L L L+ N
Sbjct: 496 SLSNNRLTGEIP----KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 57 RILSLELEEMNLSGQVPESLQS-CKSLQVLNLSTNNLFGKIPTQLCKWFP-YLVXXXXXX 114
++L L E SG++PESL + SL L+LS+NN G I LC+ L
Sbjct: 346 KVLDLSFNE--FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 115 XXXXGTIPHELGNCVYLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPS 171
G IP L NC L +L+LS+N LSG IPS
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNY------------------------LSGTIPS 436
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGT 120
L++ LSG ++ +C L++LN+S+N G IP K YL G
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL---SLAENKFTGE 284
Query: 121 IPHEL-GNCVYLNTLYLSYNR 140
IP L G C L L LS N
Sbjct: 285 IPDFLSGACDTLTGLDLSGNH 305
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 19 IKSFNDPQGKLSSWSLTNSSVGFIC----RFNG-VSCWNGLENRILSLELEEMNLSGQVP 73
I FND G++ S +++ +I R G + W G + L+L + SG +P
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102
L C+SL L+L+TN G IP + K
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
L L ++SG +P+ + + L +L+LS+N L G+IP +
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIP 97
L+L L G++P+++ + L ++LS NNL G IP
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 26 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 83
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH++ T + + I ARG+ + +++ S+ I
Sbjct: 84 IVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIH---RDLKSNNI 139
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 140 FLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 199
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 200 GIVLYELMTGQLPY 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 38 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 95
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH++ T + + I ARG+ + +++ S+ I
Sbjct: 96 IVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIH---RDLKSNNI 151
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 212 GIVLYELMTGQLPY 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 45/205 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK--------PL--VY 343
G + A + +A+K + + + FL E + L+H L K P+ +
Sbjct: 29 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT 88
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVD 403
++M+ G+L L S+ + P + A G+++ +++ ++ ILV
Sbjct: 89 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH---RDLRAANILVS 145
Query: 404 EDFDARIMDFGFSRLTN------------------------GDASLQKDVHGFGVVLLEL 439
+I DFG +R+ G +++ DV FG++L+E+
Sbjct: 146 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 440 VT-GQKPFE-------INASEEGYK 456
VT G+ P+ I A E GY+
Sbjct: 206 VTYGRIPYPGMSNPEVIRALERGYR 230
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 55/199 (27%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLEK-----------PLVYKYMSNGTLYS 353
+AIK L A + + FL E +G HPN+ + +V +YM NG+L +
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 354 LL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L H T + LR G+GA G+ + +++++ +LVD + ++
Sbjct: 140 FLRTHDGQFTIMQLVGMLR-GVGA--GMRYLSDLGYVH---RDLAARNVLVDSNLVCKVS 193
Query: 412 DFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLE-LVTGQK 444
DFG SR+ D S DV FGVV+ E L G++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 445 PF-------EINASEEGYK 456
P+ I++ EEGY+
Sbjct: 254 PYWNMTNRDVISSVEEGYR 272
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 55/199 (27%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLEK-----------PLVYKYMSNGTLYS 353
+AIK L A + + FL E +G HPN+ + +V +YM NG+L +
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 354 LL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L H T + LR G+GA G+ + +++++ +LVD + ++
Sbjct: 140 FLRTHDGQFTIMQLVGMLR-GVGA--GMRYLSDLGYVH---RDLAARNVLVDSNLVCKVS 193
Query: 412 DFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLE-LVTGQK 444
DFG SR+ D S DV FGVV+ E L G++
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 445 PF-------EINASEEGYK 456
P+ I++ EEGY+
Sbjct: 254 PYWNMTNRDVISSVEEGYR 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K + + E +F E + + L HP L E P +V +Y+SNG L + L
Sbjct: 35 VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
S+G L+ L + G+++ +++++ LVD D ++ DFG
Sbjct: 95 RSHGK-GLEPSQLLEMCYDVCEGMAF---LESHQFIHRDLAARNCLVDRDLCVKVSDFGM 150
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPFEINA 450
+R D S + DV FG+++ E+ + G+ P+++
Sbjct: 151 TRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210
Query: 451 SEE 453
+ E
Sbjct: 211 NSE 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 33 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 92
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 93 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 149
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 150 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 209
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 210 TNPEVIQNLERGYR 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 39 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 98
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 99 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 155
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 156 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 215
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 216 TNPEVIQNLERGYR 229
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 320 KQFLLEMKQVGLLKHPNL-------EKP------LVYKYMSNGTLYSLLHSNGNTALDWP 366
+ F E ++ + HPN+ + P L+ + G+LY++LH N +D
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQS 111
Query: 367 SRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARI--MDFGFSRLTNG--- 421
++ L ARG ++ ++S + +DED ARI D FS + G
Sbjct: 112 QAVKFALDXARGXAF-LHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXY 170
Query: 422 ------DASLQK----------DVHGFGVVLLELVTGQKPF-EINASEEGYK 456
+LQK D F V+L ELVT + PF +++ E G K
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXK 222
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 44 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 103
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 160
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 161 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 221 TNPEVIQNLERGYR 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL----------EKP 340
GT YK +A+K L+ +Q +VG+L+ H N+ +
Sbjct: 38 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 95
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH++ T + + I ARG+ + +++ S+ I
Sbjct: 96 IVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIH---RDLKSNNI 151
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 212 GIVLYELMTGQLPY 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 40 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 99
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 100 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 156
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 157 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 216
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 217 TNPEVIQNLERGYR 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 43 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 102
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 103 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 159
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 160 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 219
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 220 TNPEVIQNLERGYR 233
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 154
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 155 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 215 TNPEVIQNLERGYR 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 45/205 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK--------PL--VY 343
G + A + +A+K + + + FL E + L+H L K P+ +
Sbjct: 202 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT 261
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVD 403
++M+ G+L L S+ + P + A G+++ +++ ++ ILV
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH---RDLRAANILVS 318
Query: 404 EDFDARIMDFGFSRLTN------------------------GDASLQKDVHGFGVVLLEL 439
+I DFG +R+ G +++ DV FG++L+E+
Sbjct: 319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 440 VT-GQKPFE-------INASEEGYK 456
VT G+ P+ I A E GY+
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERGYR 403
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 154
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 215 TNPEVIQNLERGYR 228
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 44/178 (24%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK-------P--LVYKYMSNGTLYSLLHS 357
+AIK++ + + K F++E++Q+ + HPN+ K P LV +Y G+LY++LH
Sbjct: 35 VAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHG 93
Query: 358 -------NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI-SSSVILVDEDFDAR 409
A+ W L ++G+++ +++ +++LV +
Sbjct: 94 AEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 147
Query: 410 IMDFGF-----SRLTNGDASL---------------QKDVHGFGVVLLELVTGQKPFE 447
I DFG + +TN S + DV +G++L E++T +KPF+
Sbjct: 148 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 44/178 (24%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK-------P--LVYKYMSNGTLYSLLHS 357
+AIK++ + + K F++E++Q+ + HPN+ K P LV +Y G+LY++LH
Sbjct: 34 VAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHG 92
Query: 358 -------NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI-SSSVILVDEDFDAR 409
A+ W L ++G+++ +++ +++LV +
Sbjct: 93 AEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146
Query: 410 IMDFGF-----SRLTNGDASL---------------QKDVHGFGVVLLELVTGQKPFE 447
I DFG + +TN S + DV +G++L E++T +KPF+
Sbjct: 147 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 154
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 155 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 215 TNPEVIQNLERGYR 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 47 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 103
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 157
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 217
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 218 GERPYWEMSNQDVIKAVDEGYR 239
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 154
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 155 LARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 215 TNPEVIQNLERGYR 228
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 44 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 103
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 160
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 161 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 221 TNPEVIQNLERGYR 234
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 46 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 105
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 106 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 162
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 163 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 222
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 223 TNPEVIQNLERGYR 236
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 47 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 106
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 107 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 163
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 164 LARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 223
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 224 TNPEVIQNLERGYR 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 64 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 120
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 121 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 174
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 234
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 235 GERPYWEMSNQDVIKAVDEGYR 256
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSL 354
+ +A+K L + FL E + L+H L ++P+ + +YM NG+L
Sbjct: 48 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 107
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFG 414
L + L L + A G+++ +++ ++ ILV + +I DFG
Sbjct: 108 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH---RDLRAANILVSDTLSCKIADFG 164
Query: 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE-- 447
+RL G +++ DV FG++L E+VT G+ P+
Sbjct: 165 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 224
Query: 448 -----INASEEGYK 456
I E GY+
Sbjct: 225 TNPEVIQNLERGYR 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 53 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 109
Query: 351 LYSLLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L + L N T + LR G + G+ + +++++ IL++ +
Sbjct: 110 LDTFLKKNDGQFTVIQLVGMLR---GISAGMKYLSDMGYVH---RDLAARNILINSNLVC 163
Query: 409 RIMDFGFSRLTNGDASL--------------------------QKDVHGFGVVLLELVT- 441
++ DFG SR+ D DV +G+V+ E+V+
Sbjct: 164 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY 223
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A EEGY+
Sbjct: 224 GERPYWEMTNQDVIKAVEEGYR 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 39/180 (21%)
Query: 303 DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
+ + +A+K L + + FL E + L+H L E+P+ + +YM+ G+L
Sbjct: 36 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L S+ + P + A G+++ +++ ++ +LV E +I
Sbjct: 96 LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH---RDLRAANVLVSESLMCKIA 152
Query: 412 DFGFSRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
DFG +R+ + +++ DV FG++L E+VT G+ P+
Sbjct: 153 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 74 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 130
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 184
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 244
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 245 GERPYWEMSNQDVIKAVDEGYR 266
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGFVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 55/199 (27%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLE---------KP--LVYKYMSNGTLYS 353
+AIK L A + FL E +G HPN+ KP ++ +YM NG+L +
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 354 LLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L N T + LR G+G+ G+ + +++++ ILV+ + ++
Sbjct: 120 FLRKNDGRFTVIQLVGMLR-GIGS--GMKYLSDMSAVH---RDLAARNILVNSNLVCKVS 173
Query: 412 DFGFSRLTNGDASL--------------------------QKDVHGFGVVLLELVT-GQK 444
DFG SR+ D DV +G+V+ E+++ G++
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 445 PF-------EINASEEGYK 456
P+ I A EEGY+
Sbjct: 234 PYWDMSNQDVIKAIEEGYR 252
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P +V +YM G L L
Sbjct: 60 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 120 RECNREEVTAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHVVKVADFGL 176
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 177 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 55/199 (27%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLE---------KP--LVYKYMSNGTLYS 353
+AIK L A + FL E +G HPN+ KP ++ +YM NG+L +
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 354 LLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L N T + LR G+G+ G+ + +++++ ILV+ + ++
Sbjct: 105 FLRKNDGRFTVIQLVGMLR-GIGS--GMKYLSDMSYVH---RDLAARNILVNSNLVCKVS 158
Query: 412 DFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQK 444
DFG SR+ D + DV +G+V+ E+++ G++
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 445 PF-------EINASEEGYK 456
P+ I A EEGY+
Sbjct: 219 PYWDMSNQDVIKAIEEGYR 237
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 55/199 (27%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLE---------KP--LVYKYMSNGTLYS 353
+AIK L A + FL E +G HPN+ KP ++ +YM NG+L +
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 354 LLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L N T + LR G+G+ G+ + +++++ ILV+ + ++
Sbjct: 99 FLRKNDGRFTVIQLVGMLR-GIGS--GMKYLSDMSYVH---RDLAARNILVNSNLVCKVS 152
Query: 412 DFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQK 444
DFG SR+ D + DV +G+V+ E+++ G++
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 445 PF-------EINASEEGYK 456
P+ I A EEGY+
Sbjct: 213 PYWDMSNQDVIKAIEEGYR 231
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG +R+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 105
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 106 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 162
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 101 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 157
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 101 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 157
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 245 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 304
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +N+++ LV E+ ++ DFG
Sbjct: 305 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RNLAARNCLVGENHLVKVADFGL 361
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 362 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 106 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 162
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 287 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 346
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +N+++ LV E+ ++ DFG
Sbjct: 347 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RNLAARNCLVGENHLVKVADFGL 403
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 404 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 42 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 101
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 102 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 158
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 159 SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 42 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 101
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 102 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 158
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 159 SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 43 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 103 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 159
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 160 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 43 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 103 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 159
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 160 SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 54 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 113
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 114 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 170
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 171 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 43 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 103 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 159
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 160 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 106 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 162
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 163 SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 45 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 105 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 161
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
++ L + + + + +++++ LV E+ ++ DFG
Sbjct: 106 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 162
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 248 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +N+++ LV E+ ++ DFG
Sbjct: 308 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RNLAARNCLVGENHLVKVADFGL 364
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 365 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V +YM NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG R+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 157
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 157
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 98
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 99 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 155
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 156 SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 157
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 157
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V ++M NG
Sbjct: 74 VAIKTL---KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L + L H T + LR G A G+ + +++++ ILV+ +
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADMGYVH---RDLAARNILVNSNLVC 184
Query: 409 RIMDFGFSRLTNGDASL--------------------------QKDVHGFGVVLLELVT- 441
++ DFG SR+ D DV +G+V+ E+++
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 244
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A EEGY+
Sbjct: 245 GERPYWDMSNQDVIKAIEEGYR 266
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 99 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 155
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 156 SRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 106 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 162
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYSLL 355
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L L
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGF 415
+ L + + + + +++++ LV E+ ++ DFG
Sbjct: 99 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH---RDLAARNCLVGENHLVKVADFGL 155
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 156 SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 24 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 81
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 82 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 137
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 138 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 197
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 198 GIVLYELMTGQLPY 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 22 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 79
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 80 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 135
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 136 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 196 GIVLYELMTGQLPY 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 22 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 79
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 80 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 135
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 196 GIVLYELMTGQLPY 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 27 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 84
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 85 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 140
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 201 GIVLYELMTGQLPY 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 27 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 84
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 85 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 140
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 201 GIVLYELMTGQLPY 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V + M NG+
Sbjct: 47 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 103
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 157
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 217
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 218 GERPYWEMSNQDVIKAVDEGYR 239
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 42 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 99
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 100 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 155
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 156 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 215
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 216 GIVLYELMTGQLPY 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V + M NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGAVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 50 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 107
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 108 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 163
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 164 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 224 GIVLYELMTGQLPY 237
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 49 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 106
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 107 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 162
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 163 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 222
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 223 GIVLYELMTGQLPY 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL-------EKP--- 340
GT YK +A+K L+ +Q +VG+L+ H N+ KP
Sbjct: 50 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 107
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 108 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 163
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 164 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 224 GIVLYELMTGQLPY 237
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 61/202 (30%)
Query: 307 LAIKRLSACKLG--EKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGT 350
+AIK L K+G EKQ FL E +G HPN+ KP +V + M NG+
Sbjct: 76 VAIKTL---KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 351 LYSLL--HSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDA 408
L S L H T + LR G A G+ + +++++ IL++ +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVH---RDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG SR+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ I A +EGY+
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYR 268
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 39/180 (21%)
Query: 303 DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
+ + +A+K L + + FL E + L+H L E+P+ + ++M+ G+L
Sbjct: 35 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL 94
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L S+ + P + A G+++ +++ ++ +LV E +I
Sbjct: 95 LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH---RDLRAANVLVSESLMCKIA 151
Query: 412 DFGFSRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
DFG +R+ + +++ +V FG++L E+VT G+ P+
Sbjct: 152 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 47/194 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL----------EKP 340
GT YK +A+K L+ +Q +VG+L+ H N+ +
Sbjct: 22 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 79
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
+V ++ +LY LH T + + I A+G+ + +++ S+ I
Sbjct: 80 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIH---RDLKSNNI 135
Query: 401 LVDEDFDARIMDFGFS---------------------------RLTNGDA-SLQKDVHGF 432
+ ED +I DFG + R+ + + S Q DV+ F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 433 GVVLLELVTGQKPF 446
G+VL EL+TGQ P+
Sbjct: 196 GIVLYELMTGQLPY 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 57/201 (28%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYS 353
+AIK L + + + FL E +G HPN+ P ++ ++M NG+L S
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 354 LLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L N T + LR G A G+ + +++++ ILV+ + ++
Sbjct: 124 FLRQNDGQFTVIQLVGMLR---GIAAGMKYLADMNYVH---RDLAARNILVNSNLVCKVS 177
Query: 412 DFGFSRLTNGDAS----------------------------LQKDVHGFGVVLLELVT-G 442
DFG SR D S DV +G+V+ E+++ G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 443 QKPF-------EINASEEGYK 456
++P+ INA E+ Y+
Sbjct: 238 ERPYWDMTNQDVINAIEQDYR 258
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 43/177 (24%)
Query: 320 KQFLLEMKQVGLLKHPNLEKPL------------VYKYMSNGTLYSLLHSNGNTALDWPS 367
+ FL E + L+H NL + L V +YM+ G+L L S G + L
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 368 RLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---------- 417
L+ L + + +++++ +LV ED A++ DFG ++
Sbjct: 291 LLKFSLDVCEAMEY---LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347
Query: 418 ----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
L S + DV FG++L E+ + G+ P+ + E+GYK
Sbjct: 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 404
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 43/177 (24%)
Query: 320 KQFLLEMKQVGLLKHPNLEKPL------------VYKYMSNGTLYSLLHSNGNTALDWPS 367
+ FL E + L+H NL + L V +YM+ G+L L S G + L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 368 RLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---------- 417
L+ L + + +++++ +LV ED A++ DFG ++
Sbjct: 110 LLKFSLDVCEAMEY---LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 166
Query: 418 ----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
L S + DV FG++L E+ + G+ P+ + E+GYK
Sbjct: 167 LPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 223
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 43/177 (24%)
Query: 320 KQFLLEMKQVGLLKHPNLEKPL------------VYKYMSNGTLYSLLHSNGNTALDWPS 367
+ FL E + L+H NL + L V +YM+ G+L L S G + L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 368 RLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---------- 417
L+ L + + +++++ +LV ED A++ DFG ++
Sbjct: 104 LLKFSLDVCEAMEY---LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160
Query: 418 ----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
L S + DV FG++L E+ + G+ P+ + E+GYK
Sbjct: 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 43/177 (24%)
Query: 320 KQFLLEMKQVGLLKHPNLEKPL------------VYKYMSNGTLYSLLHSNGNTALDWPS 367
+ FL E + L+H NL + L V +YM+ G+L L S G + L
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 368 RLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---------- 417
L+ L + + +++++ +LV ED A++ DFG ++
Sbjct: 119 LLKFSLDVCEAMEY---LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175
Query: 418 ----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
L S + DV FG++L E+ + G+ P+ + E+GYK
Sbjct: 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 232
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 57/201 (28%)
Query: 307 LAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLYS 353
+AIK L + + + FL E +G HPN+ P ++ ++M NG+L S
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 354 LLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIM 411
L N T + LR G A G+ + + +++ ILV+ + ++
Sbjct: 98 FLRQNDGQFTVIQLVGMLR---GIAAGMKYLADMNYVH---RALAARNILVNSNLVCKVS 151
Query: 412 DFGFSRLTNGDAS----------------------------LQKDVHGFGVVLLELVT-G 442
DFG SR D S DV +G+V+ E+++ G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 443 QKPF-------EINASEEGYK 456
++P+ INA E+ Y+
Sbjct: 212 ERPYWDMTNQDVINAIEQDYR 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 55/212 (25%)
Query: 283 SAQNVLVSTWTGTTYKAMLLDGS-----MLAIKRLSACKLGEKQ---FLLEMKQVGLLKH 334
+ Q V+ + G YK ML S +AIK L A EKQ FL E +G H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSH 105
Query: 335 PNL---------EKPL--VYKYMSNGTLYSLLHSNGN--TALDWPSRLRIGLGAARGLSW 381
N+ KP+ + +YM NG L L + L LR G A G+ +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 382 XXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTNGDA------------------ 423
+++++ ILV+ + ++ DFG SR+ D
Sbjct: 163 LANMNYVH---RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 424 ---SLQK-----DVHGFGVVLLELVT-GQKPF 446
S +K DV FG+V+ E++T G++P+
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 42/184 (22%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEK-----------PLVYKYM 346
+L G +A+K + +L ++ E++ + +L HPN+ K LV +Y
Sbjct: 29 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 88
Query: 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDF 406
S G ++ L ++G W + +S +++ + +L+D D
Sbjct: 89 SGGEVFDYLVAHG-----WMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 143
Query: 407 DARIMDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQ 443
+ +I DFGFS T G+ + DV GV+L LV+G
Sbjct: 144 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 203
Query: 444 KPFE 447
PF+
Sbjct: 204 LPFD 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +AIK + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 37 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK-LFEVIETEKTLYLIMEY 95
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 96 ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKI 155
Query: 411 MDFGFS-RLTNG---DA-------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G DA + DV GV+L LV+G PF+
Sbjct: 156 ADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 272 LVHLIAATSNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSAC-KLGEKQFLLEMKQV 329
+ H I S+ VL G K + G ++ +K L + ++ FL E+K +
Sbjct: 2 MPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM 61
Query: 330 GLLKHPNLEK-----------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARG 378
L+HPN+ K + +Y+ GTL ++ S ++ W R+ A G
Sbjct: 62 RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASG 120
Query: 379 LSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRL 418
+++ ++++S LV E+ + + DFG +RL
Sbjct: 121 MAY---LHSMNIIHRDLNSHNCLVRENKNVVVADFGLARL 157
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +A+K + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK-LFEVIETEKTLYLVMEY 94
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKI 154
Query: 411 MDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G+ + DV GV+L LV+G PF+
Sbjct: 155 ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +A+K + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK-LFEVIETEKTLYLVMEY 94
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKI 154
Query: 411 MDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G+ + DV GV+L LV+G PF+
Sbjct: 155 ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 37/134 (27%)
Query: 341 LVYKYMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNIS 396
LV +Y+ TL + S+G +TA+++ +++ G+ A + ++I
Sbjct: 88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVH---------RDIK 138
Query: 397 SSVILVDEDFDARIMDFGFSRL--------TN---------------GDASLQ-KDVHGF 432
IL+D + +I DFG ++ TN G+A+ + D++
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSI 198
Query: 433 GVVLLELVTGQKPF 446
G+VL E++ G+ PF
Sbjct: 199 GIVLYEMLVGEPPF 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +AIK + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 34 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK-LFEVIETEKTLYLIMEY 92
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 93 ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKI 152
Query: 411 MDFGFSRLTNGDASL-----------------------QKDVHGFGVVLLELVTGQKPFE 447
DFGFS L + DV GV+L LV+G PF+
Sbjct: 153 ADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +A+K + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK-LFEVIETEKTLYLVMEY 94
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKI 154
Query: 411 MDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G+ + DV GV+L LV+G PF+
Sbjct: 155 ADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 42/218 (19%)
Query: 273 VHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL 332
+H++ S + + S G + L+ +AIK + + E F+ E + + L
Sbjct: 20 LHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL 79
Query: 333 KHPNL---------EKP--LVYKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLS 380
HP L + P LV+++M +G L L + G A + + L + L G++
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMA 137
Query: 381 WXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTNGDA----------------- 423
+ +++++ LV E+ ++ DFG +R D
Sbjct: 138 Y---LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
Query: 424 -------SLQKDVHGFGVVLLELVT-GQKPFEINASEE 453
S + DV FGV++ E+ + G+ P+E ++ E
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 79/218 (36%), Gaps = 56/218 (25%)
Query: 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKR--LSACKLGEKQFLLEMKQVGLLKHPNL 337
++ Q V+ S T A +AIKR L C+ + L E++ + HPN+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 338 -----------EKPLVYKYMSNGTLYSLL--------HSNGNTALDWPSRLRIGLGAARG 378
E LV K +S G++ ++ H +G LD + I G
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG--VLDESTIATILREVLEG 128
Query: 379 LSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRL--TNGDASLQK--------- 427
L + +++ + IL+ ED +I DFG S T GD + K
Sbjct: 129 LEYLHKNGQIH---RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 428 ------------------DVHGFGVVLLELVTGQKPFE 447
D+ FG+ +EL TG P+
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 79/217 (36%), Gaps = 56/217 (25%)
Query: 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKR--LSACKLGEKQFLLEMKQVGLLKHPNL 337
++ Q V+ S T A +AIKR L C+ + L E++ + HPN+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 338 -----------EKPLVYKYMSNGTLYSLL--------HSNGNTALDWPSRLRIGLGAARG 378
E LV K +S G++ ++ H +G LD + I G
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG--VLDESTIATILREVLEG 133
Query: 379 LSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRL--TNGDASLQK--------- 427
L + +++ + IL+ ED +I DFG S T GD + K
Sbjct: 134 LEYLHKNGQIH---RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 428 ------------------DVHGFGVVLLELVTGQKPF 446
D+ FG+ +EL TG P+
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 305 SMLAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLEK---------P--LVYKYMSNGTL 351
S +AIK L + ++FL E +G +HPN+ + P ++ ++M NG L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 352 YSLLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
S L N T + LR G A G+ + +++++ ILV+ + +
Sbjct: 105 DSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMSYVH---RDLAARNILVNSNLVCK 158
Query: 410 IMDFGFSRLTNGDASLQKDVHGFG 433
+ DFG SR ++S + G
Sbjct: 159 VSDFGLSRFLEENSSDPTETSSLG 182
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +A+K + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 37 VLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK-LFEVIETEKTLYLVMEY 95
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 96 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKI 155
Query: 411 MDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G+ + DV GV+L LV+G PF+
Sbjct: 156 ADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 57/203 (28%)
Query: 305 SMLAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLEK---------P--LVYKYMSNGTL 351
S +AIK L + ++FL E +G +HPN+ + P ++ ++M NG L
Sbjct: 43 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 352 YSLLHSNGN--TALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
S L N T + LR G A G+ + +++++ ILV+ + +
Sbjct: 103 DSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMSYVH---RDLAARNILVNSNLVCK 156
Query: 410 IMDFGFSRLTNGDAS----------------------------LQKDVHGFGVVLLELVT 441
+ DFG SR ++S D +G+V+ E+++
Sbjct: 157 VSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
Query: 442 -GQKPF-------EINASEEGYK 456
G++P+ INA E+ Y+
Sbjct: 217 FGERPYWDMSNQDVINAIEQDYR 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +A++ + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 36 ILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK-LFEVIETEKTLYLVMEY 94
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKI 154
Query: 411 MDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G+ + DV GV+L LV+G PF+
Sbjct: 155 ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL-H 356
+L G +A++ + +L ++ E++ + +L HPN+ K L + TLY ++ +
Sbjct: 36 ILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK-LFEVIETEKTLYLVMEY 94
Query: 357 SNGNTALDW-PSRLRIGLGAARG-----LSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
++G D+ + R+ AR +S +++ + +L+D D + +I
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKI 154
Query: 411 MDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQKPFE 447
DFGFS T G+ + DV GV+L LV+G PF+
Sbjct: 155 ADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 44/178 (24%)
Query: 369 LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR----------- 417
L ARG+ + +N+++ ILV E++ A+I DFG SR
Sbjct: 142 LHFAADVARGMDYLSQKQFIH---RNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 418 -----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465
L + DV +GV+L E+V+ G P+ E Y ++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--------EK 250
Query: 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523
L R++ ++ DDE+ ++ +C +P E+ S Q+ +SL + E+
Sbjct: 251 LPQGYRLEKPLN-------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 11 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 70
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 71 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 130
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 131 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 185 KEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 12 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 71
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 72 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 131
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 132 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 7 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 66
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 67 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 126
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 127 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 180
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 10 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 69
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 70 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 129
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 130 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 184 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 294 GTTYKAMLL-DGSMLAIKRL------SACKLGEK--QFLLEMKQVGLLKHPNLEK----- 339
G +K L+ D S++AIK L ++ EK +F E+ + L HPN+ K
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 340 ----PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
+V +++ G LY L + + W +LR+ L A G+ +
Sbjct: 93 HNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
Query: 396 SSSVIL--VDEDFD--ARIMDFGFSRLTNGDAS----------------------LQKDV 429
S ++ L +DE+ A++ DFG S+ + S + D
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 430 HGFGVVLLELVTGQKPFE 447
+ F ++L ++TG+ PF+
Sbjct: 212 YSFAMILYTILTGEGPFD 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 11 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 70
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 71 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 130
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 131 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 185 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 9 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 68
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 69 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 128
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 129 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 182
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 183 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 4 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 63
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 64 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 123
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 124 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 177
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 178 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 12 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 71
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 72 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 131
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 132 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 42/184 (22%)
Query: 301 LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEK-----------PLVYKYM 346
+L G +A+K + +L ++ E++ +L HPN+ K LV +Y
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYA 95
Query: 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDF 406
S G ++ L ++G + +R + + +S +++ + +L+D D
Sbjct: 96 SGGEVFDYLVAHGRXK-EKEARAKF----RQIVSAVQYCHQKFIVHRDLKAENLLLDADX 150
Query: 407 DARIMDFGFS-RLTNGDA----------------------SLQKDVHGFGVVLLELVTGQ 443
+ +I DFGFS T G+ + DV GV+L LV+G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 444 KPFE 447
PF+
Sbjct: 211 LPFD 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 30 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 89
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 90 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 149
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 150 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 203
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 204 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 31 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 90
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 91 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 150
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 151 VKDL---IGFGLQVAKGMKYLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 204
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 205 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 49/217 (22%)
Query: 282 FSAQNVLVSTWTGTTYKAMLLDGSM---LAIKRLSACKLGEKQFLLEMKQVGLLK---HP 335
A V++ST G+ + G +A+K L +QF +V +L+ H
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 336 NL----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXX 385
N+ +V ++ +LY LH T + I A+G+ +
Sbjct: 93 NILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK 151
Query: 386 XXXXXXXQNISSSVILVDEDFDARIMDFGFSRLT-------------------------- 419
+++ S+ I + E +I DFG + +
Sbjct: 152 NIIH---RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 420 --NGDASLQKDVHGFGVVLLELVTGQKPF-EINASEE 453
N S Q DV+ +G+VL EL+TG+ P+ IN ++
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 71 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 130
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 131 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 190
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 191 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 244
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 12 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 71
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 72 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 131
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 132 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 12 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 71
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 72 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 131
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 132 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGT 120
L + N+SG +P+ L K+L L+ S N L G +P + P LV G
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS-LPNLVGITFDGNRISGA 164
Query: 121 IPHELGNCVYLNT-LYLSYNR 140
IP G+ L T + +S NR
Sbjct: 165 IPDSYGSFSKLFTSMTISRNR 185
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIP 97
GL + L+L + G +P+ L K L LN+S NNL G+IP
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 13 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 72
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 73 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 132
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 133 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 186
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 13 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 72
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 73 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 132
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 133 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMLD 186
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 10 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 69
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 70 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 129
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 130 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 184 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 294 GTTYKAMLL-DGSMLAIKRL------SACKLGEK--QFLLEMKQVGLLKHPNLEK----- 339
G +K L+ D S++AIK L ++ EK +F E+ + L HPN+ K
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 340 ----PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
+V +++ G LY L + + W +LR+ L A G+ +
Sbjct: 93 HNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
Query: 396 SSSVIL--VDEDFD--ARIMDFGFSRLTNGDAS----------------------LQKDV 429
S ++ L +DE+ A++ DFG S+ + S + D
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 430 HGFGVVLLELVTGQKPFE 447
+ F ++L ++TG+ PF+
Sbjct: 212 YSFAMILYTILTGEGPFD 229
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 42/197 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LV 342
G + L+ +AIK + + E+ F+ E + + L HP L + P LV
Sbjct: 21 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 80
Query: 343 YKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVIL 401
+++M +G L L + G A + + L + L G+++ +++++ L
Sbjct: 81 FEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAY---LEEASVIHRDLAARNCL 135
Query: 402 VDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLL 437
V E+ ++ DFG +R D S + DV FGV++
Sbjct: 136 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 195
Query: 438 ELVT-GQKPFEINASEE 453
E+ + G+ P+E ++ E
Sbjct: 196 EVFSEGKIPYENRSNSE 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 52/192 (27%)
Query: 301 LLDGSMLAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL---------EKP------L 341
L D +A+K L A + F L E + L HP + E P +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSR-LRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
V +Y+ TL ++H+ G P R + + A + L++ +++ + I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNGIIH---RDVKPANI 147
Query: 401 LVDEDFDARIMDFGFSRL-------------------------TNGDA-SLQKDVHGFGV 434
++ ++MDFG +R GD+ + DV+ G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 435 VLLELVTGQKPF 446
VL E++TG+ PF
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 56/233 (24%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQ--NVLVSTWTGTTYKAMLLDGS----MLAIKRLS-ACK 316
L P + + H++ S+ V+ G Y LLD A+K L+
Sbjct: 17 LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 76
Query: 317 LGE-KQFLLEMKQVGLLKHPNL-----------EKPLVY-KYMSNGTLYSLL--HSNGNT 361
+GE QFL E + HPN+ PLV YM +G L + + ++ T
Sbjct: 77 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 136
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR---- 417
D + GL A+G+ + +++++ ++DE F ++ DFG +R
Sbjct: 137 VKDL---IGFGLQVAKGMKFLASKKFVH---RDLAARNCMLDEKFTVKVADFGLARDMYD 190
Query: 418 -----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L + + DV FGV+L EL+T G P+
Sbjct: 191 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 42/197 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LV 342
G + L+ +AIK + + E+ F+ E + + L HP L + P LV
Sbjct: 24 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83
Query: 343 YKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVIL 401
+++M +G L L + G A + + L + L G+++ +++++ L
Sbjct: 84 FEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAY---LEEACVIHRDLAARNCL 138
Query: 402 VDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLL 437
V E+ ++ DFG +R D S + DV FGV++
Sbjct: 139 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198
Query: 438 ELVT-GQKPFEINASEE 453
E+ + G+ P+E ++ E
Sbjct: 199 EVFSEGKIPYENRSNSE 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 52/192 (27%)
Query: 301 LLDGSMLAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL---------EKP------L 341
L D +A+K L A + F L E + L HP + E P +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSR-LRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
V +Y+ TL ++H+ G P R + + A + L++ +++ + I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNGIIH---RDVKPANI 147
Query: 401 LVDEDFDARIMDFGFSRL-------------------------TNGDA-SLQKDVHGFGV 434
++ ++MDFG +R GD+ + DV+ G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 435 VLLELVTGQKPF 446
VL E++TG+ PF
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 42/197 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LV 342
G + L+ +AIK + + E+ F+ E + + L HP L + P LV
Sbjct: 19 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 343 YKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVIL 401
+++M +G L L + G A + + L + L G+++ +++++ L
Sbjct: 79 FEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAY---LEEACVIHRDLAARNCL 133
Query: 402 VDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLL 437
V E+ ++ DFG +R D S + DV FGV++
Sbjct: 134 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 193
Query: 438 ELVT-GQKPFEINASEE 453
E+ + G+ P+E ++ E
Sbjct: 194 EVFSEGKIPYENRSNSE 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 42/197 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LV 342
G + L+ +AIK + + E+ F+ E + + L HP L + P LV
Sbjct: 21 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 80
Query: 343 YKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVIL 401
+++M +G L L + G A + + L + L G+++ +++++ L
Sbjct: 81 FEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAY---LEEACVIHRDLAARNCL 135
Query: 402 VDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLL 437
V E+ ++ DFG +R D S + DV FGV++
Sbjct: 136 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 195
Query: 438 ELVT-GQKPFEINASEE 453
E+ + G+ P+E ++ E
Sbjct: 196 EVFSEGKIPYENRSNSE 212
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 149
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 150 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 209
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 210 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 253
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+L+ +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 254 LLELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 298
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 33/177 (18%)
Query: 294 GTTYKAMLL----DGSMLAIKRLSACKLGEKQFLLEMKQVGLL---KHPNLEKP------ 340
G+ KA+L+ DG IK ++ ++ K+ ++V +L KHPN+ +
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE 94
Query: 341 -----LVYKYMSNGTLYSLLHSNG------NTALDWPSRLRIGLGAARGLSWXXXXXXXX 389
+V Y G L+ +++ + LDW ++ + L
Sbjct: 95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---------RK 145
Query: 390 XXXQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELVTGQKPF 446
++I S I + +D ++ DFG +R+ N L + G L + KP+
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPY 202
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 44/178 (24%)
Query: 369 LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR----------- 417
L ARG+ + +++++ ILV E++ A+I DFG SR
Sbjct: 135 LHFAADVARGMDYLSQKQFIH---RDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 418 -----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465
L + DV +GV+L E+V+ G P+ E Y ++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--------EK 243
Query: 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523
L R++ ++ DDE+ ++ +C +P E+ S Q+ +SL + E+
Sbjct: 244 LPQGYRLEKPLN-------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 49/165 (29%)
Query: 325 EMKQVGLLKHPN--------LEKP---LVYKYMSNGTLYSLLHSN---GNTALDWPSRLR 370
E K +LKHPN L++P LV ++ G L +L + ++W ++
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI- 114
Query: 371 IGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFD--------ARIMDFGFSR----- 417
ARG+++ +++ SS IL+ + + +I DFG +R
Sbjct: 115 -----ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 418 --LTNGDA--------------SLQKDVHGFGVVLLELVTGQKPF 446
++ A S DV +GV+L EL+TG+ PF
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 43/197 (21%)
Query: 289 VSTWTGTTYKAMLLDGSMLAIKRLSACKLGE----KQFLLEMKQVGLLKHPNLEK----- 339
V T+ L G +A+K L+ K+ + E++ + L +HP++ K
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 340 --P----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQ 393
P +V +Y+S G L+ + NG LD R+ G+ + +
Sbjct: 86 STPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVH---R 140
Query: 394 NISSSVILVDEDFDARIMDFGFSR-LTNGD----------------------ASLQKDVH 430
++ +L+D +A+I DFG S +++G+ A + D+
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 431 GFGVVLLELVTGQKPFE 447
GV+L L+ G PF+
Sbjct: 201 SSGVILYALLCGTLPFD 217
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 44/178 (24%)
Query: 369 LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSR----------- 417
L ARG+ + +++++ ILV E++ A+I DFG SR
Sbjct: 145 LHFAADVARGMDYLSQKQFIH---RDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 418 -----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465
L + DV +GV+L E+V+ G P+ E Y ++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--------EK 253
Query: 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523
L R++ ++ DDE+ ++ +C +P E+ S Q+ +SL + E+
Sbjct: 254 LPQGYRLEKPLN-------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 48/168 (28%)
Query: 321 QFLLEMKQVGLLKHPNL---------EKP------LVYKYMSNGTLYSLLHSNGNTALDW 365
+F E + L HP + E P +V +Y+ TL ++H+ G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---T 114
Query: 366 PSR-LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRL------ 418
P R + + A + L++ +++ + I++ ++MDFG +R
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIH---RDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 419 -------------------TNGDA-SLQKDVHGFGVVLLELVTGQKPF 446
GD+ + DV+ G VL E++TG+ PF
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 48/168 (28%)
Query: 321 QFLLEMKQVGLLKHPNL---------EKP------LVYKYMSNGTLYSLLHSNGNTALDW 365
+F E + L HP + E P +V +Y+ TL ++H+ G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---T 114
Query: 366 PSR-LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRL------ 418
P R + + A + L++ +++ + I++ ++MDFG +R
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIH---RDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 419 -------------------TNGDA-SLQKDVHGFGVVLLELVTGQKPF 446
GD+ + DV+ G VL E++TG+ PF
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLEKPLVYKYMSNG 349
G +K D G ++AIK+ + + +K L E++ + LKHPNL L+ +
Sbjct: 17 GVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN-LLEVFRRKR 75
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGA--ARGLSWXXXXXXXXXXXQN-----ISSSVILV 402
L+ + +T L R + G+ + ++W N + IL+
Sbjct: 76 RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135
Query: 403 DEDFDARIMDFGFSRLTNGDASLQKD 428
+ ++ DFGF+RL G + D
Sbjct: 136 TKHSVIKLCDFGFARLLTGPSDYYDD 161
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 52/192 (27%)
Query: 301 LLDGSMLAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL---------EKP------L 341
L D +A+K L A + F L E + L HP + E P +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSR-LRIGLGAARGLSWXXXXXXXXXXXQNISSSVI 400
V +Y+ TL ++H+ G P R + + A + L++ +++ + I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNGIIH---RDVKPANI 147
Query: 401 LVDEDFDARIMDFGFSRL-------------------------TNGDA-SLQKDVHGFGV 434
L+ +++DFG +R GD+ + DV+ G
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 435 VLLELVTGQKPF 446
VL E++TG+ PF
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 52/186 (27%)
Query: 307 LAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL---------EKP------LVYKYMS 347
+A+K L A + F L E + L HP + E P +V +Y+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 348 NGTLYSLLHSNGNTALDWPSR-LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDF 406
TL ++H+ G P R + + A + L++ +++ + I++
Sbjct: 117 GVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNGIIH---RDVKPANIMISATN 170
Query: 407 DARIMDFGFSRL-------------------------TNGDA-SLQKDVHGFGVVLLELV 440
++MDFG +R GD+ + DV+ G VL E++
Sbjct: 171 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 230
Query: 441 TGQKPF 446
TG+ PF
Sbjct: 231 TGEPPF 236
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 45/198 (22%)
Query: 294 GTTYKAMLL-DGSMLAIKRL------SACKLGEK--QFLLEMKQVGLLKHPNLEK----- 339
G +K L+ D S++AIK L ++ EK +F E+ + L HPN+ K
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 340 ----PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
+V +++ G LY L + + W +LR+ L A G+ +
Sbjct: 93 HNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
Query: 396 SSSVIL--VDEDFD--ARIMDFGFSRLTNGDAS----------------------LQKDV 429
S ++ L +DE+ A++ DF S+ + S + D
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 430 HGFGVVLLELVTGQKPFE 447
+ F ++L ++TG+ PF+
Sbjct: 212 YSFAMILYTILTGEGPFD 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 56/229 (24%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 246
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEIL 490
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K D+
Sbjct: 247 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKP-DNCPD 289
Query: 491 QFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 290 MLFELMRMCWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 335
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 155
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 156 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 215
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 216 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 259
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 260 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 304
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 42/197 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LV 342
G + L+ +AIK + + E+ F+ E + + L HP L + P LV
Sbjct: 22 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 343 YKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVIL 401
++M +G L L + G A + + L + L G+++ +++++ L
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAY---LEEACVIHRDLAARNCL 136
Query: 402 VDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLL 437
V E+ ++ DFG +R D S + DV FGV++
Sbjct: 137 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 196
Query: 438 ELVT-GQKPFEINASEE 453
E+ + G+ P+E ++ E
Sbjct: 197 EVFSEGKIPYENRSNSE 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 34/155 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLE--MKQVGLLKHPN--------------- 336
G YK L D +A+K S + F+ E + +V L++H N
Sbjct: 27 GAVYKGSL-DERPVAVKVFSFA--NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83
Query: 337 -LEKPLVYKYMSNGTL--YSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXX------XX 387
+E LV +Y NG+L Y LH++ DW S R+ RGL++
Sbjct: 84 RMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYK 138
Query: 388 XXXXXQNISSSVILVDEDFDARIMDFGFSRLTNGD 422
++++S +LV D I DFG S G+
Sbjct: 139 PAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 151
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ V EDF +I DFG +R L +G + DV
Sbjct: 152 AARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 212 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 255
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+L+ +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 256 LLELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 300
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 158
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 219 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 262
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 263 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 307
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 157
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 218 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 261
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 262 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 306
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 225 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 268
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 269 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 313
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 158
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 219 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 262
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 263 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 307
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 151
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 152 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 212 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 255
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 256 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 300
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 157
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 218 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 261
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 262 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 306
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 225 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 268
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 269 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 313
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 36/148 (24%)
Query: 329 VGLLKHPNLEKPLVYKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWXXXXX 386
+G++ P ++ YM +G L + S T D S GL ARG+ +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS---FGLQVARGMEYLAEQK 144
Query: 387 XXXXXXQNISSSVILVDEDFDARIMDFGFSR---------------------------LT 419
+++++ ++DE F ++ DFG +R L
Sbjct: 145 FVH---RDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 420 NGDASLQKDVHGFGVVLLELVT-GQKPF 446
+ + DV FGV+L EL+T G P+
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 341 LVYKYMSNGTLYSLLHS-----NGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNI 395
++ + M+ G L S L S N L PS ++ A +++
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 154
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ +V EDF +I DFG +R L +G + DV
Sbjct: 155 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 214
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD--DE 488
FGVVL E+ T +E+ Y+G LS+ ++ V++ L K + D
Sbjct: 215 SFGVVLWEIAT--------LAEQPYQG--------LSNEQVLRFVMEGGLLDKPDNCPDM 258
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL--GFSE--FY--EEN 533
+ + +++ C PK + S ++ + SI E++ GF E FY EEN
Sbjct: 259 LFELMRM---CWQYNPKMRPSFLEI---ISSIKEEMEPGFREVSFYYSEEN 303
>pdb|3DJC|A Chain A, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|B Chain B, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|C Chain C, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|D Chain D, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|E Chain E, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|F Chain F, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|G Chain G, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|H Chain H, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|I Chain I, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|J Chain J, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|K Chain K, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
pdb|3DJC|L Chain L, Crystal Structure Of Pantothenate Kinase From Legionella
Pneumophila
Length = 266
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 271 KLVHLIAATSNFSAQNVLV------STWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLL 324
++ + IAAT +F QN++V +T+ ++K L G++L RLSA L +
Sbjct: 111 RIANAIAATHSFPNQNIIVIDFGTATTFCAISHKKAYLGGAILPGLRLSADALSKNT--A 168
Query: 325 EMKQVGLLKHPNLEKPLVYKYMSNGTLYSLL 355
++ V ++K ++ + + +G Y +L
Sbjct: 169 KLPSVEIIKTESVVGRSTIESIQSGVYYGVL 199
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +N+++ ILV+ + +
Sbjct: 100 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RNLATRNILVENENRVK 155
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQKDV----------------HGF-------GVVL 436
+ +++D D +I DFG + D +KD+ H F G +L
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 233 YTLLVGKPPFETSCLKETY 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQKDV----------------HGF-------GVVL 436
+ +++D D +I DFG + D +KD+ H F G +L
Sbjct: 157 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 216
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 217 YTLLVGKPPFETSCLKETY 235
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 43/197 (21%)
Query: 289 VSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFL----LEMKQVGLLKHPNLEK----- 339
V T+ L G +A+K L+ K+ + E++ + L +HP++ K
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 340 --P----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQ 393
P +V +Y+S G L+ + +G RL + LS +
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL-----FQQILSAVDYCHRHMVVHR 135
Query: 394 NISSSVILVDEDFDARIMDFGFSR-LTNGD----------------------ASLQKDVH 430
++ +L+D +A+I DFG S +++G+ A + D+
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 431 GFGVVLLELVTGQKPFE 447
GV+L L+ G PF+
Sbjct: 196 SCGVILYALLCGTLPFD 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 43/197 (21%)
Query: 289 VSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFL----LEMKQVGLLKHPNLEK----- 339
V T+ L G +A+K L+ K+ + E++ + L +HP++ K
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 340 --P----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQ 393
P +V +Y+S G L+ + +G RL + LS +
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL-----FQQILSAVDYCHRHMVVHR 135
Query: 394 NISSSVILVDEDFDARIMDFGFSR-LTNGD----------------------ASLQKDVH 430
++ +L+D +A+I DFG S +++G+ A + D+
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 431 GFGVVLLELVTGQKPFE 447
GV+L L+ G PF+
Sbjct: 196 SCGVILYALLCGTLPFD 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L ++ +D L+ +G+ + +++++ ILV+ + +
Sbjct: 102 SLRDYLQAHAER-IDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 157
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase
(Serca) From Bovine Muscle
Length = 992
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 456 KGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACK---CVA-VRPKEKWSMY 511
KG + ++ G +DV D+A TG+ +DD L + AC+ C A V P K +
Sbjct: 628 KGTAIAICRRIGIFGENEDVADRAYTGREFDDLPLAEQREACRRACCFARVEPTHKSKIV 687
Query: 512 QVYISLCSIAEQLG 525
+ S I G
Sbjct: 688 EYLQSFDEITAMTG 701
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 27/82 (32%)
Query: 393 QNISSSVILVDEDFDARIMDFGFS-RL--------------------------TNGDASL 425
+++ S IL+DE ++ DFG S RL T D +
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 426 QKDVHGFGVVLLELVTGQKPFE 447
+ DV G+ L+EL TGQ P++
Sbjct: 209 RADVWSLGISLVELATGQFPYK 230
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 24/92 (26%)
Query: 33 SLTNSSVGFICRFNGVSCW-------NGLENRILS-----------LELEEMNLSGQVPE 74
S T++ V F FNG+S N + L L+L + L P
Sbjct: 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512
Query: 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPY 106
+ S SLQVLN+S NN F FPY
Sbjct: 513 AFNSLSSLQVLNMSHNNFFS------LDTFPY 538
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 24/92 (26%)
Query: 33 SLTNSSVGFICRFNGVSCW-------NGLENRILS-----------LELEEMNLSGQVPE 74
S T++ V F FNG+S N + L L+L + L P
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPY 106
+ S SLQVLN+S NN F FPY
Sbjct: 489 AFNSLSSLQVLNMSHNNFFS------LDTFPY 514
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 98 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 153
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 97 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 152
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 99 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 154
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPY 106
L+L + L P + S SLQVLN+S NN F FPY
Sbjct: 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS------LDTFPY 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 99 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 154
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 103 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 158
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 99 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 154
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 130 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 185
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 104 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 159
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 105 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 160
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 102 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 157
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 117 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 172
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 106 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 161
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2QPU|A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose
pdb|2QPU|B Chain B, Sugar Tongs Mutant S378p In Complex With Acarbose
pdb|2QPU|C Chain C, Sugar Tongs Mutant S378p In Complex With Acarbose
Length = 405
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 449 NASEEGYKGNLVNWIDQL---SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
N ++ ++ NLVNW+D++ +S+G + D K + + E+ + + K V
Sbjct: 219 NYDQDAHRQNLVNWVDKVGGAASAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGV 275
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 44/178 (24%)
Query: 304 GSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNLEK-------------PLVYKYMSNG 349
G ++A+K+L + + + F E++ + L+H N+ K L+ +Y+ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ + +++++ ILV+ + +
Sbjct: 117 SLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIH---RDLATRNILVENENRVK 172
Query: 410 IMDFGFSR--------------------------LTNGDASLQKDVHGFGVVLLELVT 441
I DFG ++ LT S+ DV FGVVL EL T
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1RP8|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1)
Inactive Mutant D180a In Complex With Maltoheptaose
pdb|1RP9|A Chain A, Crystal Structure Of Barley Alpha-amylase Isozyme 1 (amy1)
Inactive Mutant D180a In Complex With Acarbose
Length = 405
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 449 NASEEGYKGNLVNWIDQL---SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
N ++ ++ NLVNW+D++ +S+G + D K + + E+ + + K V
Sbjct: 219 NYDQDAHRQNLVNWVDKVGGAASAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGV 275
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|1HT6|A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha-
Amylase Isozyme 1
pdb|1P6W|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1)
In Complex With The Substrate Analogue, Methyl
4i,4ii,4iii- Tri-Thiomaltotetraoside (Thio-Dp4)
pdb|1RPK|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1)
In Complex With Acarbose
Length = 405
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 449 NASEEGYKGNLVNWIDQL---SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
N ++ ++ NLVNW+D++ +S+G + D K + + E+ + + K V
Sbjct: 219 NYDQDAHRQNLVNWVDKVGGAASAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGV 275
>pdb|3BSH|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) Double Mutant
Y105aY380A IN COMPLEX WITH INHIBITOR ACARBOSE
Length = 414
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 449 NASEEGYKGNLVNWIDQL---SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
N ++ ++ NLVNW+D++ +S+G + D K + + E+ + + K V
Sbjct: 219 NYDQDAHRQNLVNWVDKVGGAASAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGV 275
>pdb|2QPS|A Chain A, "sugar Tongs" Mutant Y380a In Complex With Acarbose
Length = 405
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 449 NASEEGYKGNLVNWIDQL---SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
N ++ ++ NLVNW+D++ +S+G + D K + + E+ + + K V
Sbjct: 219 NYDQDAHRQNLVNWVDKVGGAASAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGV 275
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 411 MDFGFSRLTNGDASLQK-DVHGFGVVLLELVTGQKPFEINASEEGYK 456
+D+ + G +K D+ GV+ E + G+ PFE N +E YK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3BSG|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant
Length = 414
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 449 NASEEGYKGNLVNWIDQL---SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
N ++ ++ NLVNW+D++ +S+G + D K + + E+ + + K V
Sbjct: 219 NYDQDAHRQNLVNWVDKVGGAASAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGV 275
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 321 QFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLLHSNGNTALDW 365
Q+ M+ V + + VYK S G + LLH G++AL W
Sbjct: 10 QYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSW 54
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 428 DVHGFGVVLLELVTGQKPFEINASEEGYK 456
D+ GV+ E + G+ PFE N +E YK
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 321 QFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLLHSNGNTALDW 365
Q+ M+ V + + VYK S G + LLH G++AL W
Sbjct: 14 QYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSW 58
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ ++ED + +I DFG + D +K DV G ++
Sbjct: 152 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 211
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 212 YTLLVGKPPFETSCLKETY 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ ++ED + +I DFG + D +K DV G ++
Sbjct: 148 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 207
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 208 YTLLVGKPPFETSCLKETY 226
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ ++ED + +I DFG + D +K DV G ++
Sbjct: 148 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 207
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 208 YTLLVGKPPFETSCLKETY 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 23/77 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTN-GDASL-----------------QKDVHG-----FGVVL 436
IL+D+D +I DFG + GDA QK H FGV+L
Sbjct: 149 ILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 208
Query: 437 LELVTGQKPFEINASEE 453
E++ GQ PF EE
Sbjct: 209 YEMLIGQSPFHGQDEEE 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ ++ED + +I DFG + D +K DV G ++
Sbjct: 172 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 231
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 232 YTLLVGKPPFETSCLKETY 250
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ ++ED + +I DFG + D +K DV G ++
Sbjct: 146 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 205
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 206 YTLLVGKPPFETSCLKETY 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 23/77 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTN-GDASL-----------------QKDVHG-----FGVVL 436
IL+D+D +I DFG + GDA QK H FGV+L
Sbjct: 150 ILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 209
Query: 437 LELVTGQKPFEINASEE 453
E++ GQ PF EE
Sbjct: 210 YEMLIGQSPFHGQDEEE 226
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ ++ED + +I DFG + D +K DV G ++
Sbjct: 170 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 229
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 230 YTLLVGKPPFETSCLKETY 248
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ +++D D +I DFG + D +K D+ G +L
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 233 YTLLVGKPPFETSCLKETY 251
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 23/79 (29%)
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
+ +++D D +I DFG + D +K D+ G +L
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 437 LELVTGQKPFEINASEEGY 455
L+ G+ PFE + +E Y
Sbjct: 233 YTLLVGKPPFETSCLKETY 251
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 42/190 (22%)
Query: 293 TGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLL-EMKQVGLLKHPNL-----------EK 339
+GT Y AM + G +AI++++ + +K+ ++ E+ + K+PN+ E
Sbjct: 34 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 93
Query: 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSV 399
+V +Y++ G+L ++ T +D +I L +NI S
Sbjct: 94 WVVMEYLAGGSLTDVVTE---TCMD---EGQIAAVCRECLQALEFLHSNQVIHRNIKSDN 147
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVL 436
IL+ D ++ DFGF + S + D+ G++
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 207
Query: 437 LELVTGQKPF 446
+E++ G+ P+
Sbjct: 208 IEMIEGEPPY 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,607,363
Number of Sequences: 62578
Number of extensions: 550687
Number of successful extensions: 1995
Number of sequences better than 100.0: 270
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 1701
Number of HSP's gapped (non-prelim): 328
length of query: 538
length of database: 14,973,337
effective HSP length: 103
effective length of query: 435
effective length of database: 8,527,803
effective search space: 3709594305
effective search space used: 3709594305
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)