Query 040267
Match_columns 538
No_of_seqs 614 out of 4711
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 10:32:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2.8E-48 9.4E-53 384.2 13.1 225 280-525 13-292 (299)
2 4aoj_A High affinity nerve gro 100.0 1.2E-47 4E-52 384.9 14.6 223 280-523 41-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 8.9E-48 3E-52 382.2 13.2 218 282-520 28-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1E-46 3.4E-51 373.2 20.7 226 280-524 36-302 (307)
5 3hmm_A TGF-beta receptor type- 100.0 2.1E-46 7.2E-51 372.8 17.2 238 281-526 4-301 (303)
6 4b9d_A Serine/threonine-protei 100.0 7.2E-45 2.5E-49 365.1 16.7 215 280-515 24-276 (350)
7 4ase_A Vascular endothelial gr 100.0 2.2E-45 7.5E-50 371.4 12.9 232 272-523 56-348 (353)
8 3fpq_A Serine/threonine-protei 100.0 4E-44 1.4E-48 352.1 18.4 212 283-515 29-282 (290)
9 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-44 6.3E-49 360.5 16.2 221 280-525 58-319 (336)
10 4fih_A Serine/threonine-protei 100.0 3.6E-44 1.2E-48 359.5 17.1 213 280-515 74-323 (346)
11 3hyh_A Carbon catabolite-derep 100.0 2.2E-43 7.5E-48 343.8 18.2 211 280-515 13-262 (275)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.9E-44 2E-48 352.7 13.4 212 280-515 32-284 (311)
13 4fie_A Serine/threonine-protei 100.0 3.9E-43 1.3E-47 360.6 18.7 213 280-515 151-400 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-43 1.3E-47 346.9 10.5 207 280-510 24-271 (304)
15 3uim_A Brassinosteroid insensi 100.0 1.2E-41 4E-46 342.7 18.9 258 266-523 16-312 (326)
16 4g31_A Eukaryotic translation 100.0 2E-41 6.9E-46 335.5 16.2 213 280-515 5-279 (299)
17 2qkw_B Protein kinase; three-h 100.0 2.3E-40 7.8E-45 332.7 21.1 250 269-523 28-316 (321)
18 4b99_A Mitogen-activated prote 100.0 1.7E-40 5.8E-45 341.3 17.4 165 280-450 54-267 (398)
19 3soc_A Activin receptor type-2 100.0 5E-39 1.7E-43 323.2 16.7 236 279-525 23-321 (322)
20 4f9c_A Cell division cycle 7-r 100.0 7.4E-39 2.5E-43 325.6 18.1 167 275-450 16-251 (361)
21 2nru_A Interleukin-1 receptor- 100.0 8.5E-38 2.9E-42 311.7 24.3 247 267-522 12-306 (307)
22 1qcf_A Haematopoetic cell kina 100.0 7E-39 2.4E-43 337.3 11.9 228 278-526 186-448 (454)
23 4hcu_A Tyrosine-protein kinase 100.0 2.5E-38 8.5E-43 309.5 14.8 222 280-523 10-267 (269)
24 2qol_A Ephrin receptor; recept 100.0 2.8E-38 9.6E-43 324.1 15.2 225 279-525 44-312 (373)
25 3v5w_A G-protein coupled recep 100.0 5.3E-38 1.8E-42 336.7 17.7 216 279-515 188-449 (689)
26 3p86_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 312.9 16.1 230 277-527 34-303 (309)
27 3kul_A Ephrin type-A receptor 100.0 5.4E-38 1.9E-42 316.0 15.0 225 280-526 49-317 (325)
28 3uto_A Twitchin; kinase, muscl 100.0 9.7E-38 3.3E-42 336.1 17.9 217 280-515 157-410 (573)
29 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.2E-38 7.6E-43 333.2 12.6 228 279-527 183-445 (452)
30 2psq_A Fibroblast growth facto 100.0 9.9E-38 3.4E-42 319.8 16.2 225 279-524 80-366 (370)
31 3cbl_A C-FES, proto-oncogene t 100.0 2.2E-38 7.5E-43 325.6 11.2 224 279-524 113-376 (377)
32 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-38 6.3E-43 337.5 10.8 226 279-525 219-481 (495)
33 3ugc_A Tyrosine-protein kinase 100.0 1E-37 3.4E-42 309.4 15.1 232 280-524 10-293 (295)
34 3gen_A Tyrosine-protein kinase 100.0 7.8E-38 2.7E-42 308.2 13.8 223 279-523 23-281 (283)
35 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.1E-37 1E-41 301.5 17.8 223 279-523 7-265 (268)
36 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-37 4.4E-42 327.2 16.0 222 279-523 192-446 (450)
37 3q4u_A Activin receptor type-1 100.0 2.8E-37 9.5E-42 306.8 17.6 226 279-520 7-300 (301)
38 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-36 4E-41 304.0 21.0 225 280-525 10-285 (310)
39 3op5_A Serine/threonine-protei 100.0 2.1E-37 7.1E-42 316.8 15.1 239 278-529 33-336 (364)
40 3fxz_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 301.9 20.4 215 279-515 19-269 (297)
41 1qpc_A LCK kinase; alpha beta 100.0 1.4E-37 4.7E-42 305.8 12.6 226 279-525 12-272 (279)
42 3t9t_A Tyrosine-protein kinase 100.0 2.7E-37 9.3E-42 301.4 14.4 222 280-523 8-265 (267)
43 3g2f_A Bone morphogenetic prot 100.0 7E-37 2.4E-41 309.0 17.3 241 279-530 12-326 (336)
44 2c30_A Serine/threonine-protei 100.0 2.8E-36 9.7E-41 303.0 21.4 225 269-516 24-295 (321)
45 3poz_A Epidermal growth factor 100.0 1.3E-37 4.6E-42 313.4 11.7 221 280-522 15-278 (327)
46 2h8h_A Proto-oncogene tyrosine 100.0 7.1E-38 2.4E-42 336.0 10.1 229 278-527 265-528 (535)
47 3vhe_A Vascular endothelial gr 100.0 1.3E-37 4.5E-42 317.3 11.4 234 270-523 12-356 (359)
48 3lb7_A RAF proto-oncogene seri 100.0 5.1E-36 1.7E-40 299.2 22.6 227 279-524 35-302 (307)
49 3kfa_A Tyrosine-protein kinase 100.0 1E-37 3.4E-42 308.1 10.1 230 278-528 11-277 (288)
50 3kmu_A ILK, integrin-linked ki 100.0 5E-37 1.7E-41 299.9 14.8 222 280-522 10-270 (271)
51 3fe3_A MAP/microtubule affinit 100.0 1E-36 3.5E-41 306.9 17.1 214 279-516 14-265 (328)
52 3qup_A Tyrosine-protein kinase 100.0 5E-37 1.7E-41 308.4 14.5 232 277-529 20-305 (323)
53 3tt0_A Basic fibroblast growth 100.0 7.3E-37 2.5E-41 314.8 15.6 227 279-526 68-356 (382)
54 2ivs_A Proto-oncogene tyrosine 100.0 5.6E-37 1.9E-41 306.5 14.2 224 279-523 22-312 (314)
55 4f0f_A Serine/threonine-protei 100.0 8.8E-37 3E-41 301.3 15.2 222 280-520 19-287 (287)
56 3zgw_A Maternal embryonic leuc 100.0 2.5E-36 8.6E-41 306.1 18.6 214 279-516 9-261 (347)
57 3c1x_A Hepatocyte growth facto 100.0 1.3E-36 4.4E-41 311.6 16.0 229 282-532 91-365 (373)
58 2pvf_A Fibroblast growth facto 100.0 8.7E-37 3E-41 308.4 14.5 237 279-536 34-332 (334)
59 1luf_A Muscle-specific tyrosin 100.0 5.2E-37 1.8E-41 310.8 12.7 230 275-525 42-338 (343)
60 1mp8_A Focal adhesion kinase 1 100.0 9.2E-37 3.1E-41 300.4 14.1 224 279-524 14-278 (281)
61 2eva_A TAK1 kinase - TAB1 chim 100.0 9.3E-36 3.2E-40 297.3 21.3 229 280-526 8-267 (307)
62 3mdy_A Bone morphogenetic prot 100.0 5.8E-36 2E-40 302.2 20.0 238 276-526 33-335 (337)
63 2jii_A Serine/threonine-protei 100.0 5.2E-37 1.8E-41 312.3 12.3 235 280-530 42-344 (352)
64 4eqm_A Protein kinase; transfe 100.0 4.6E-36 1.6E-40 297.6 18.5 230 280-528 11-281 (294)
65 3dtc_A Mitogen-activated prote 100.0 1.1E-36 3.9E-41 297.8 14.0 217 280-520 7-271 (271)
66 4euu_A Serine/threonine-protei 100.0 6E-36 2.1E-40 300.2 19.5 238 280-521 9-308 (319)
67 1t46_A HOMO sapiens V-KIT hard 100.0 1.3E-36 4.5E-41 303.7 14.1 226 279-524 22-309 (313)
68 1byg_A CSK, protein (C-termina 100.0 9.6E-37 3.3E-41 299.7 12.2 222 279-523 20-274 (278)
69 1tki_A Titin; serine kinase, m 100.0 2.4E-36 8.2E-41 303.4 15.2 219 279-516 4-258 (321)
70 1csn_A Casein kinase-1; phosph 100.0 6.4E-36 2.2E-40 296.6 17.6 232 280-528 10-289 (298)
71 3lxp_A Non-receptor tyrosine-p 100.0 5.2E-37 1.8E-41 307.9 9.6 231 282-527 33-315 (318)
72 3og7_A AKAP9-BRAF fusion prote 100.0 5.1E-36 1.7E-40 296.4 16.5 225 279-522 23-288 (289)
73 3pls_A Macrophage-stimulating 100.0 1E-35 3.6E-40 295.0 18.6 226 282-528 23-293 (298)
74 3l9p_A Anaplastic lymphoma kin 100.0 4.3E-37 1.5E-41 314.7 8.6 224 280-524 71-347 (367)
75 3lzb_A Epidermal growth factor 100.0 2.1E-36 7.1E-41 304.8 13.5 221 280-522 15-278 (327)
76 3f66_A Hepatocyte growth facto 100.0 8.2E-36 2.8E-40 296.0 17.6 225 281-527 26-296 (298)
77 3kex_A Receptor tyrosine-prote 100.0 7E-37 2.4E-41 307.9 9.9 221 280-522 13-276 (325)
78 4hgt_A Casein kinase I isoform 100.0 8E-36 2.8E-40 295.4 17.3 235 278-529 7-287 (296)
79 1mqb_A Ephrin type-A receptor 100.0 3.9E-36 1.3E-40 303.5 15.2 224 281-526 45-313 (333)
80 2izr_A Casein kinase I isoform 100.0 2.6E-36 9E-41 304.3 13.9 232 280-529 9-288 (330)
81 2ozo_A Tyrosine-protein kinase 100.0 4.2E-36 1.4E-40 327.0 16.4 220 287-528 343-604 (613)
82 1rjb_A FL cytokine receptor; k 100.0 2E-36 6.7E-41 306.9 12.5 227 278-524 43-336 (344)
83 3brb_A Proto-oncogene tyrosine 100.0 6.5E-36 2.2E-40 299.0 16.1 230 274-524 28-310 (313)
84 3niz_A Rhodanese family protei 100.0 2.3E-35 7.9E-40 294.9 20.0 224 279-515 20-300 (311)
85 3gxj_A TGF-beta receptor type- 100.0 2.3E-37 7.9E-42 307.6 5.5 231 280-526 3-301 (303)
86 3cc6_A Protein tyrosine kinase 100.0 3.7E-36 1.3E-40 296.0 13.7 223 279-523 11-274 (281)
87 1b6c_B TGF-B superfamily recep 100.0 2.3E-35 7.9E-40 298.5 19.5 236 275-526 37-340 (342)
88 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-35 7.9E-40 292.3 19.1 234 279-529 8-287 (296)
89 2yab_A Death-associated protei 100.0 2.4E-35 8.3E-40 300.6 19.5 217 279-515 11-272 (361)
90 4fvq_A Tyrosine-protein kinase 100.0 1.2E-35 4E-40 293.4 16.6 227 280-529 8-282 (289)
91 1u59_A Tyrosine-protein kinase 100.0 3.4E-36 1.2E-40 297.3 12.7 225 281-527 10-277 (287)
92 1o6l_A RAC-beta serine/threoni 100.0 2.6E-35 8.8E-40 297.6 19.3 213 280-516 5-261 (337)
93 3tki_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 304.2 10.9 216 280-516 7-262 (323)
94 2xir_A Vascular endothelial gr 100.0 3.3E-36 1.1E-40 301.2 12.3 235 271-525 18-313 (316)
95 1ob3_A PFPK5, cell division co 100.0 2.9E-35 9.8E-40 290.8 18.3 223 280-515 2-280 (288)
96 1xbb_A Tyrosine-protein kinase 100.0 2.1E-36 7.2E-41 299.4 10.2 223 279-524 15-281 (291)
97 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-35 3.6E-40 300.3 15.1 211 280-516 9-259 (336)
98 2w1i_A JAK2; chromosomal rearr 100.0 8.3E-36 2.8E-40 300.1 14.3 232 280-524 41-324 (326)
99 4dc2_A Protein kinase C IOTA t 100.0 2E-35 6.9E-40 304.2 17.2 217 279-510 51-307 (396)
100 2y0a_A Death-associated protei 100.0 2.8E-35 9.5E-40 296.4 17.8 216 280-515 11-271 (326)
101 4e5w_A Tyrosine-protein kinase 100.0 9.6E-36 3.3E-40 296.0 14.1 228 281-521 22-301 (302)
102 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-35 4.5E-40 301.7 15.1 214 278-515 21-280 (353)
103 3uc3_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 303.6 14.4 220 279-516 19-275 (361)
104 4fl3_A Tyrosine-protein kinase 100.0 6.5E-36 2.2E-40 326.3 13.6 215 286-523 375-632 (635)
105 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-35 4.9E-40 294.4 14.6 213 280-515 13-292 (298)
106 2wqm_A Serine/threonine-protei 100.0 5.7E-35 1.9E-39 291.7 19.1 232 279-528 31-303 (310)
107 4eut_A Serine/threonine-protei 100.0 1.7E-35 5.7E-40 306.1 15.6 240 280-523 9-310 (396)
108 3lxl_A Tyrosine-protein kinase 100.0 2.3E-36 8E-41 304.3 8.7 232 280-524 23-305 (327)
109 3llt_A Serine/threonine kinase 100.0 6.3E-36 2.2E-40 305.2 12.0 178 269-450 24-263 (360)
110 3qd2_B Eukaryotic translation 100.0 9.2E-36 3.1E-40 299.8 12.7 214 279-515 5-325 (332)
111 1p4o_A Insulin-like growth fac 100.0 2.3E-36 8E-41 303.3 8.4 229 273-522 18-299 (322)
112 2i1m_A Macrophage colony-stimu 100.0 4.2E-36 1.4E-40 303.0 10.2 228 277-524 43-328 (333)
113 2v62_A Serine/threonine-protei 100.0 5.9E-36 2E-40 303.7 11.1 240 280-533 37-339 (345)
114 1fvr_A Tyrosine-protein kinase 100.0 1.2E-35 4.1E-40 299.1 13.0 225 280-525 25-303 (327)
115 2buj_A Serine/threonine-protei 100.0 9.9E-36 3.4E-40 298.1 12.3 225 280-523 29-307 (317)
116 3gni_B Strad alpha; kinase fol 100.0 4E-35 1.4E-39 302.5 16.9 170 279-451 24-242 (389)
117 2a19_B Interferon-induced, dou 100.0 5.9E-36 2E-40 294.5 10.2 217 280-525 11-277 (284)
118 3soa_A Calcium/calmodulin-depe 100.0 8.8E-35 3E-39 304.2 19.5 218 279-516 10-268 (444)
119 3g33_A Cell division protein k 100.0 1.1E-34 3.7E-39 289.5 19.3 227 278-515 7-296 (308)
120 3o0g_A Cell division protein k 100.0 3.4E-35 1.1E-39 290.9 15.4 225 280-515 2-282 (292)
121 3a8x_A Protein kinase C IOTA t 100.0 4.9E-35 1.7E-39 296.7 16.8 216 280-510 9-264 (345)
122 2w4o_A Calcium/calmodulin-depe 100.0 3.6E-35 1.2E-39 298.4 15.7 218 278-515 51-305 (349)
123 2pmi_A Negative RE, cyclin-dep 100.0 7.2E-35 2.5E-39 292.1 17.7 168 279-450 4-213 (317)
124 1fot_A TPK1 delta, CAMP-depend 100.0 1E-34 3.5E-39 291.0 18.7 212 280-515 6-258 (318)
125 2bdw_A Hypothetical protein K1 100.0 8.9E-35 3.1E-39 296.9 18.6 218 279-516 28-285 (362)
126 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.7E-35 1.9E-39 296.8 16.9 212 280-515 41-293 (350)
127 3m2w_A MAP kinase-activated pr 100.0 2.9E-35 1E-39 292.5 14.4 214 280-516 17-257 (299)
128 3is5_A Calcium-dependent prote 100.0 3.2E-35 1.1E-39 290.1 14.3 217 280-515 22-278 (285)
129 3ork_A Serine/threonine protei 100.0 5.8E-35 2E-39 292.0 16.3 224 279-522 11-281 (311)
130 3uqc_A Probable conserved tran 100.0 4.7E-35 1.6E-39 289.1 15.3 221 280-524 31-267 (286)
131 1nxk_A MAP kinase-activated pr 100.0 7.8E-35 2.7E-39 301.3 17.5 219 280-516 61-322 (400)
132 4fr4_A YANK1, serine/threonine 100.0 9.8E-35 3.3E-39 298.0 18.0 215 280-515 15-271 (384)
133 3cok_A Serine/threonine-protei 100.0 6.9E-35 2.4E-39 286.3 15.9 214 279-515 10-262 (278)
134 3sv0_A Casein kinase I-like; t 100.0 1E-34 3.4E-39 306.5 18.2 234 279-529 6-285 (483)
135 2eue_A Carbon catabolite derep 100.0 1.5E-34 5.3E-39 283.5 18.3 212 280-516 13-263 (275)
136 3q60_A ROP5B; pseudokinase, tr 100.0 9.2E-36 3.2E-40 305.3 9.6 223 280-521 62-360 (371)
137 3byv_A Rhoptry kinase; malaria 100.0 1.7E-35 5.7E-40 304.1 11.5 217 279-522 72-368 (377)
138 4agu_A Cyclin-dependent kinase 100.0 1.4E-34 4.6E-39 289.0 17.7 228 280-516 3-285 (311)
139 2h34_A Serine/threonine-protei 100.0 2.1E-34 7.2E-39 287.7 18.8 225 279-524 33-298 (309)
140 1u5q_A Serine/threonine protei 100.0 5E-35 1.7E-39 297.1 14.4 215 280-516 54-306 (348)
141 2y94_A 5'-AMP-activated protei 100.0 1E-34 3.6E-39 305.8 17.4 212 280-515 16-266 (476)
142 3c0i_A Peripheral plasma membr 100.0 2.6E-35 8.9E-40 299.7 12.4 217 280-515 24-286 (351)
143 2x7f_A TRAF2 and NCK-interacti 100.0 1.6E-35 5.4E-40 297.8 10.6 225 271-515 15-286 (326)
144 3v8s_A RHO-associated protein 100.0 2.7E-35 9.4E-40 304.7 12.6 224 272-516 61-330 (410)
145 1kob_A Twitchin; kinase, intra 100.0 1.8E-34 6E-39 296.9 18.6 219 279-516 50-305 (387)
146 1xjd_A Protein kinase C, theta 100.0 5.8E-35 2E-39 295.9 14.5 214 277-514 14-268 (345)
147 3fdn_A Serine/threonine-protei 100.0 1.5E-34 5.2E-39 284.1 17.0 214 279-516 8-258 (279)
148 3p1a_A MYT1 kinase, membrane-a 100.0 1.9E-35 6.7E-40 295.5 10.8 211 280-515 57-304 (311)
149 3a62_A Ribosomal protein S6 ki 100.0 2E-34 6.8E-39 290.2 18.2 213 279-515 16-276 (327)
150 1t4h_A Serine/threonine-protei 100.0 3.6E-34 1.2E-38 283.1 19.3 213 282-515 28-282 (290)
151 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-34 4.2E-39 296.3 16.4 219 278-524 63-341 (365)
152 3dls_A PAS domain-containing s 100.0 4.6E-35 1.6E-39 295.9 13.1 209 278-516 22-275 (335)
153 3ll6_A Cyclin G-associated kin 100.0 5E-35 1.7E-39 295.1 13.3 223 280-527 28-313 (337)
154 4aw2_A Serine/threonine-protei 100.0 2.5E-35 8.6E-40 307.4 11.3 228 271-516 65-339 (437)
155 2yfx_A Tyrosine-protein kinase 100.0 3E-35 1E-39 296.2 11.3 224 279-523 29-305 (327)
156 2a2a_A Death-associated protei 100.0 2.5E-34 8.5E-39 288.7 17.8 216 280-515 12-272 (321)
157 1wak_A Serine/threonine-protei 100.0 1E-34 3.5E-39 299.7 15.4 233 279-515 36-391 (397)
158 3kk8_A Calcium/calmodulin depe 100.0 1.5E-34 5.3E-39 284.7 16.0 218 279-516 5-262 (284)
159 3dbq_A Dual specificity protei 100.0 3.6E-35 1.2E-39 297.6 11.8 214 280-516 9-274 (343)
160 3i6u_A CDS1, serine/threonine- 100.0 1.5E-34 5.1E-39 301.1 16.2 220 277-515 132-399 (419)
161 2vd5_A DMPK protein; serine/th 100.0 2.8E-35 9.7E-40 304.8 10.6 227 270-515 51-327 (412)
162 2i0e_A Protein kinase C-beta I 100.0 2.3E-34 8E-39 292.4 17.1 214 278-515 18-276 (353)
163 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-34 4.5E-39 291.3 15.1 216 285-515 16-270 (325)
164 2x4f_A Myosin light chain kina 100.0 1.5E-34 5.2E-39 296.3 15.8 212 285-515 94-342 (373)
165 3f3z_A Calcium/calmodulin-depe 100.0 2.5E-34 8.6E-39 282.2 16.6 217 279-515 8-261 (277)
166 2vwi_A Serine/threonine-protei 100.0 7.2E-35 2.5E-39 289.5 12.8 225 278-515 13-287 (303)
167 3pg1_A Mitogen-activated prote 100.0 2.8E-34 9.6E-39 293.2 17.4 175 271-450 13-238 (362)
168 2w5a_A Serine/threonine-protei 100.0 2.7E-35 9.3E-40 289.3 9.4 219 279-518 5-270 (279)
169 1u46_A ACK-1, activated CDC42 100.0 2.6E-35 8.9E-40 291.1 9.0 223 280-523 18-285 (291)
170 1cm8_A Phosphorylated MAP kina 100.0 4.4E-34 1.5E-38 292.3 18.3 227 279-516 24-308 (367)
171 3bhy_A Death-associated protei 100.0 5.5E-34 1.9E-38 280.5 18.1 224 280-523 5-275 (283)
172 2zmd_A Dual specificity protei 100.0 9.9E-35 3.4E-39 299.5 13.3 214 280-516 56-321 (390)
173 2acx_A G protein-coupled recep 100.0 2.6E-34 8.8E-39 307.3 16.8 220 279-516 183-445 (576)
174 2ac3_A MAP kinase-interacting 100.0 2.3E-34 7.9E-39 288.0 15.5 225 280-515 12-295 (316)
175 3ttj_A Mitogen-activated prote 100.0 2.9E-34 9.8E-39 302.5 16.6 164 279-450 61-267 (464)
176 3hko_A Calcium/calmodulin-depe 100.0 2E-34 6.9E-39 292.1 14.8 224 274-515 20-330 (345)
177 1vzo_A Ribosomal protein S6 ki 100.0 5.6E-35 1.9E-39 297.7 10.6 218 279-516 53-322 (355)
178 3rp9_A Mitogen-activated prote 100.0 5.5E-34 1.9E-38 300.4 18.5 158 279-442 52-280 (458)
179 2r3i_A Cell division protein k 100.0 6.3E-34 2.2E-38 282.4 17.8 225 280-515 3-283 (299)
180 4aaa_A Cyclin-dependent kinase 100.0 1.7E-34 5.8E-39 291.2 13.8 232 280-516 25-307 (331)
181 2yex_A Serine/threonine-protei 100.0 8.5E-35 2.9E-39 285.2 11.2 216 279-515 6-261 (276)
182 2wtk_C Serine/threonine-protei 100.0 1.7E-33 5.9E-38 280.1 20.7 215 279-516 4-264 (305)
183 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-34 4.2E-39 288.3 12.3 214 280-517 22-272 (303)
184 1ua2_A CAK, cell division prot 100.0 7.1E-34 2.4E-38 288.5 18.1 229 276-516 6-292 (346)
185 3nsz_A CK II alpha, casein kin 100.0 2.8E-34 9.7E-39 289.1 15.1 159 280-448 36-233 (330)
186 2h6d_A 5'-AMP-activated protei 100.0 5.8E-34 2E-38 279.4 16.8 213 280-516 11-262 (276)
187 4ejn_A RAC-alpha serine/threon 100.0 3.6E-34 1.2E-38 300.8 16.4 214 279-515 147-404 (446)
188 3oz6_A Mitogen-activated prote 100.0 5.8E-34 2E-38 293.7 17.6 166 278-450 7-235 (388)
189 3mtl_A Cell division protein k 100.0 1.6E-34 5.3E-39 290.6 12.6 223 280-515 2-281 (324)
190 2y7j_A Phosphorylase B kinase 100.0 1.1E-33 3.8E-38 289.1 19.2 222 274-515 88-359 (365)
191 3eqc_A Dual specificity mitoge 100.0 2.5E-34 8.5E-39 293.4 14.2 166 280-450 33-234 (360)
192 1x8b_A WEE1HU, WEE1-like prote 100.0 9.2E-35 3.1E-39 286.3 10.5 213 279-515 10-279 (289)
193 2j0j_A Focal adhesion kinase 1 100.0 2E-34 6.8E-39 315.7 14.2 225 278-524 388-653 (656)
194 3kvw_A DYRK2, dual specificity 100.0 4.5E-34 1.5E-38 298.3 16.2 168 279-450 96-303 (429)
195 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.5E-34 1.2E-38 288.7 14.7 168 277-450 31-242 (329)
196 2vgo_A Serine/threonine-protei 100.0 8E-34 2.7E-38 279.7 16.9 213 280-516 14-263 (284)
197 2r5t_A Serine/threonine-protei 100.0 3.6E-34 1.2E-38 293.1 14.6 214 279-516 37-290 (373)
198 3nyv_A Calmodulin-domain prote 100.0 7.3E-34 2.5E-38 301.7 17.3 217 280-516 26-282 (484)
199 2clq_A Mitogen-activated prote 100.0 5.3E-34 1.8E-38 282.3 15.2 216 281-515 23-278 (295)
200 3q5i_A Protein kinase; CDPK, m 100.0 9.4E-34 3.2E-38 302.2 18.0 219 278-516 34-302 (504)
201 2ycf_A Serine/threonine-protei 100.0 6.6E-34 2.3E-38 285.7 15.7 218 279-515 9-274 (322)
202 2vx3_A Dual specificity tyrosi 100.0 1.4E-33 4.6E-38 290.4 18.2 171 278-450 52-262 (382)
203 2qr7_A Ribosomal protein S6 ki 100.0 4.8E-34 1.6E-38 289.1 14.6 218 279-516 21-278 (342)
204 3lm5_A Serine/threonine-protei 100.0 6.4E-34 2.2E-38 286.5 15.3 223 276-516 24-288 (327)
205 3mwu_A Calmodulin-domain prote 100.0 1.4E-33 4.8E-38 299.5 18.7 218 279-516 21-277 (486)
206 3eb0_A Putative uncharacterize 100.0 2.7E-34 9.4E-39 295.7 12.6 233 276-522 3-330 (383)
207 1zy4_A Serine/threonine-protei 100.0 6.5E-34 2.2E-38 282.4 14.5 216 279-515 5-283 (303)
208 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.1E-34 2.4E-38 303.0 15.8 219 279-515 184-448 (543)
209 2rku_A Serine/threonine-protei 100.0 9.1E-34 3.1E-38 280.8 15.5 213 280-516 15-266 (294)
210 2owb_A Serine/threonine-protei 100.0 8.6E-34 2.9E-38 286.6 15.5 214 279-516 40-292 (335)
211 2jam_A Calcium/calmodulin-depe 100.0 1.3E-33 4.5E-38 281.1 16.6 216 280-515 9-261 (304)
212 3qyz_A Mitogen-activated prote 100.0 1.3E-33 4.4E-38 288.7 16.9 166 279-451 26-237 (364)
213 3an0_A Dual specificity mitoge 100.0 2.2E-34 7.4E-39 291.4 11.0 219 277-515 48-310 (340)
214 3n9x_A Phosphotransferase; mal 100.0 1.1E-33 3.9E-38 295.6 16.7 163 279-447 25-253 (432)
215 2j7t_A Serine/threonine-protei 100.0 1.7E-33 5.8E-38 279.8 17.0 217 279-515 18-275 (302)
216 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-34 5.4E-39 289.5 9.6 224 278-525 31-305 (319)
217 2fst_X Mitogen-activated prote 100.0 5.9E-34 2E-38 291.3 14.0 165 279-450 28-234 (367)
218 3fme_A Dual specificity mitoge 100.0 9.7E-34 3.3E-38 279.7 15.1 217 279-515 6-266 (290)
219 3e3p_A Protein kinase, putativ 100.0 8.3E-34 2.8E-38 289.3 15.0 236 273-516 16-315 (360)
220 1phk_A Phosphorylase kinase; g 100.0 1.2E-33 4E-38 280.3 15.6 218 278-515 15-283 (298)
221 1z57_A Dual specificity protei 100.0 1.4E-33 4.9E-38 284.5 16.3 167 280-450 14-238 (339)
222 3lij_A Calcium/calmodulin depe 100.0 1.6E-33 5.6E-38 299.6 17.0 222 279-520 36-298 (494)
223 3mi9_A Cell division protein k 100.0 1.5E-33 5E-38 286.7 15.9 227 280-516 17-312 (351)
224 3com_A Serine/threonine-protei 100.0 2.2E-33 7.6E-38 280.6 17.0 217 278-515 27-278 (314)
225 1q8y_A SR protein kinase; tran 100.0 1E-33 3.6E-38 289.9 13.7 232 280-515 19-333 (373)
226 1blx_A Cyclin-dependent kinase 100.0 4.4E-33 1.5E-37 279.8 18.0 227 277-515 8-296 (326)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-33 6.3E-38 286.0 15.0 165 279-450 10-227 (353)
228 3fhr_A MAP kinase-activated pr 100.0 1.5E-33 5.2E-38 284.9 14.2 221 279-516 27-288 (336)
229 1j1b_A Glycogen synthase kinas 100.0 1.7E-33 5.9E-38 293.1 14.7 221 281-515 55-336 (420)
230 4exu_A Mitogen-activated prote 100.0 2.8E-33 9.7E-38 286.8 16.1 164 279-450 41-246 (371)
231 3pfq_A PKC-B, PKC-beta, protei 100.0 3.3E-33 1.1E-37 307.0 17.7 214 278-515 339-597 (674)
232 2i6l_A Mitogen-activated prote 100.0 1.8E-33 6E-38 281.6 14.0 164 280-450 11-229 (320)
233 2xrw_A Mitogen-activated prote 100.0 2.9E-33 9.8E-38 286.8 15.6 164 279-450 24-230 (371)
234 2eu9_A Dual specificity protei 100.0 2E-33 6.8E-38 285.5 14.2 167 280-450 19-243 (355)
235 2wei_A Calmodulin-domain prote 100.0 9.9E-33 3.4E-37 272.4 18.7 218 278-515 20-276 (287)
236 2pml_X PFPK7, Ser/Thr protein 100.0 1.9E-33 6.5E-38 285.3 13.9 223 279-515 30-322 (348)
237 4e7w_A Glycogen synthase kinas 100.0 3.6E-34 1.2E-38 295.8 8.4 224 280-516 40-322 (394)
238 3rgf_A Cyclin-dependent kinase 100.0 8.2E-33 2.8E-37 286.8 17.4 164 282-450 22-240 (405)
239 3coi_A Mitogen-activated prote 100.0 1.1E-32 3.8E-37 280.4 17.6 163 280-450 24-228 (353)
240 2iwi_A Serine/threonine-protei 100.0 7.6E-34 2.6E-38 283.8 8.3 212 274-515 25-283 (312)
241 3cek_A Dual specificity protei 100.0 2.3E-33 8E-38 280.5 10.6 216 278-516 26-293 (313)
242 3aln_A Dual specificity mitoge 100.0 6.5E-33 2.2E-37 279.0 13.8 220 279-515 21-285 (327)
243 3a99_A Proto-oncogene serine/t 100.0 1E-33 3.6E-38 284.1 7.3 209 277-515 40-293 (320)
244 3dzo_A Rhoptry kinase domain; 100.0 1.6E-32 5.6E-37 285.1 12.3 209 280-515 78-363 (413)
245 3qa8_A MGC80376 protein; kinas 100.0 2.9E-32 9.9E-37 294.4 12.8 233 280-522 14-309 (676)
246 2dyl_A Dual specificity mitoge 100.0 7.7E-32 2.6E-36 269.7 14.7 216 279-515 24-283 (318)
247 2rio_A Serine/threonine-protei 100.0 4.7E-32 1.6E-36 283.5 13.4 214 282-515 17-295 (434)
248 3p23_A Serine/threonine-protei 100.0 7.8E-32 2.7E-36 281.3 12.6 213 280-515 24-283 (432)
249 2pzi_A Probable serine/threoni 100.0 1.4E-31 4.9E-36 295.4 14.2 210 280-522 80-328 (681)
250 2vuw_A Serine/threonine-protei 100.0 7.1E-30 2.4E-34 257.9 7.0 161 280-447 20-278 (336)
251 1ogq_A PGIP-2, polygalacturona 99.9 8.8E-25 3E-29 218.3 11.8 170 7-182 2-179 (313)
252 4azs_A Methyltransferase WBDD; 99.9 7.3E-24 2.5E-28 227.9 8.7 152 288-447 242-418 (569)
253 4ecn_A Leucine-rich repeat pro 99.9 8E-23 2.7E-27 228.7 8.4 164 6-177 264-541 (876)
254 1zar_A RIO2 kinase; serine kin 99.9 9E-22 3.1E-26 193.2 10.8 139 271-422 81-245 (282)
255 4eco_A Uncharacterized protein 99.9 6.6E-22 2.3E-26 216.5 9.7 162 7-176 26-298 (636)
256 3en9_A Glycoprotease, O-sialog 99.8 1.1E-21 3.8E-26 209.8 10.2 123 283-421 339-481 (540)
257 3rgz_A Protein brassinosteroid 99.8 1.2E-21 4.2E-26 219.1 9.8 158 4-170 5-195 (768)
258 4fcg_A Uncharacterized protein 99.8 2.7E-21 9.3E-26 194.2 4.1 172 6-182 22-211 (328)
259 1zth_A RIO1 serine protein kin 99.8 1.4E-19 4.7E-24 175.3 9.5 130 282-421 49-221 (258)
260 3e6j_A Variable lymphocyte rec 99.8 7.9E-19 2.7E-23 166.9 13.4 141 40-182 16-164 (229)
261 3rgz_A Protein brassinosteroid 99.8 4.5E-19 1.5E-23 198.3 9.1 137 60-198 612-750 (768)
262 2v9t_B SLIT homolog 2 protein 99.8 3.4E-18 1.2E-22 161.4 12.8 148 40-188 8-166 (220)
263 2o6s_A Variable lymphocyte rec 99.7 8.6E-18 2.9E-22 157.1 13.9 142 40-182 4-153 (208)
264 2v70_A SLIT-2, SLIT homolog 2 99.7 5.2E-18 1.8E-22 160.2 11.5 142 40-182 8-158 (220)
265 1w8a_A SLIT protein; signaling 99.7 1.4E-17 4.9E-22 153.6 10.7 130 40-170 5-143 (192)
266 3m19_A Variable lymphocyte rec 99.7 2.6E-17 8.7E-22 158.6 11.4 126 56-182 35-160 (251)
267 2o6r_A Variable lymphocyte rec 99.7 4.8E-17 1.6E-21 147.9 11.2 130 40-170 4-141 (177)
268 2o6q_A Variable lymphocyte rec 99.7 1.6E-16 5.5E-21 154.8 12.9 126 56-182 37-162 (270)
269 4g8a_A TOLL-like receptor 4; l 99.7 1.6E-16 5.4E-21 173.3 11.8 158 24-182 8-178 (635)
270 1ogq_A PGIP-2, polygalacturona 99.7 4.5E-17 1.6E-21 162.3 6.8 136 57-193 150-310 (313)
271 2wfh_A SLIT homolog 2 protein 99.7 4.2E-16 1.4E-20 143.8 11.5 116 60-180 14-129 (193)
272 4fcg_A Uncharacterized protein 99.6 4.1E-16 1.4E-20 156.4 10.6 123 56-181 150-281 (328)
273 3m19_A Variable lymphocyte rec 99.6 1.3E-15 4.3E-20 146.7 12.3 126 56-182 59-184 (251)
274 4gyi_A RIO2 kinase; protein ki 99.6 4.2E-16 1.4E-20 157.3 8.8 137 274-421 89-267 (397)
275 3rfs_A Internalin B, repeat mo 99.6 2.2E-15 7.5E-20 146.9 13.3 124 56-180 85-208 (272)
276 2je0_A Acidic leucine-rich nuc 99.6 1.8E-16 6.2E-21 139.7 4.9 124 56-182 17-145 (149)
277 1w8a_A SLIT protein; signaling 99.6 1.4E-15 4.8E-20 140.2 10.7 120 59-182 11-131 (192)
278 2v70_A SLIT-2, SLIT homolog 2 99.6 1.5E-15 5.2E-20 143.1 10.7 114 56-170 57-170 (220)
279 2xot_A Amphoterin-induced prot 99.6 1.6E-15 5.4E-20 154.2 11.4 134 39-173 14-156 (361)
280 3v47_A TOLL-like receptor 5B a 99.6 9.8E-16 3.4E-20 160.5 10.0 142 41-182 6-159 (455)
281 2wfh_A SLIT homolog 2 protein 99.6 3.9E-15 1.3E-19 137.4 11.2 127 40-168 7-141 (193)
282 2ell_A Acidic leucine-rich nuc 99.6 1E-15 3.5E-20 137.8 6.8 126 55-183 23-153 (168)
283 2z81_A CD282 antigen, TOLL-lik 99.6 1.7E-15 5.7E-20 162.7 9.0 139 42-182 3-153 (549)
284 1ozn_A Reticulon 4 receptor; N 99.6 7.3E-15 2.5E-19 144.1 12.7 127 55-182 31-158 (285)
285 3vq2_A TLR4, TOLL-like recepto 99.6 4.8E-15 1.6E-19 161.2 12.5 127 55-182 31-158 (606)
286 2v9t_B SLIT homolog 2 protein 99.6 4.9E-15 1.7E-19 139.6 10.6 112 56-168 56-167 (220)
287 2z62_A TOLL-like receptor 4, v 99.6 1E-14 3.6E-19 142.2 12.5 127 55-182 27-154 (276)
288 2id5_A Lingo-1, leucine rich r 99.6 5E-15 1.7E-19 156.2 11.0 138 44-182 12-157 (477)
289 2z66_A Variable lymphocyte rec 99.6 2.9E-15 1E-19 148.5 8.4 141 40-182 4-155 (306)
290 2o6q_A Variable lymphocyte rec 99.6 2.1E-14 7.2E-19 139.7 13.2 125 56-181 61-185 (270)
291 3v47_A TOLL-like receptor 5B a 99.6 9E-15 3.1E-19 153.2 11.0 126 56-182 275-400 (455)
292 2z80_A TOLL-like receptor 2, v 99.5 6E-15 2.1E-19 149.4 9.0 140 40-182 27-179 (353)
293 1ozn_A Reticulon 4 receptor; N 99.5 9.2E-15 3.1E-19 143.4 9.9 125 56-181 80-205 (285)
294 3rfs_A Internalin B, repeat mo 99.5 2.1E-14 7.1E-19 139.9 12.2 124 56-182 63-186 (272)
295 1ziw_A TOLL-like receptor 3; i 99.5 2.3E-14 7.8E-19 158.0 13.3 127 55-182 24-150 (680)
296 1p9a_G Platelet glycoprotein I 99.5 2.1E-14 7.2E-19 141.3 11.4 120 56-179 31-150 (290)
297 3g39_A Variable lymphocyte rec 99.5 2.4E-14 8.1E-19 129.2 10.8 108 59-170 12-119 (170)
298 2o6s_A Variable lymphocyte rec 99.5 3.3E-14 1.1E-18 132.6 11.7 114 56-170 52-165 (208)
299 3j0a_A TOLL-like receptor 5; m 99.5 1.9E-14 6.6E-19 162.4 11.5 136 43-181 14-152 (844)
300 1p9a_G Platelet glycoprotein I 99.5 4.8E-14 1.6E-18 138.7 12.7 121 56-180 55-175 (290)
301 1dce_A Protein (RAB geranylger 99.5 1.6E-14 5.5E-19 155.2 10.0 109 57-171 442-551 (567)
302 2xot_A Amphoterin-induced prot 99.5 1.5E-14 5.1E-19 147.0 9.1 132 56-189 64-204 (361)
303 3oja_B Anopheles plasmodium-re 99.5 1.6E-14 5.4E-19 156.8 9.8 125 57-182 52-176 (597)
304 2z66_A Variable lymphocyte rec 99.5 2E-14 6.8E-19 142.4 9.5 120 57-177 102-223 (306)
305 4eco_A Uncharacterized protein 99.5 3.7E-15 1.3E-19 163.0 4.2 124 56-182 206-358 (636)
306 2r9u_A Variable lymphocyte rec 99.5 5E-14 1.7E-18 127.6 11.0 107 59-169 15-121 (174)
307 3e6j_A Variable lymphocyte rec 99.5 4.3E-14 1.5E-18 134.0 10.9 113 56-170 64-176 (229)
308 4b8c_D Glucose-repressible alc 99.5 9.2E-15 3.2E-19 161.8 7.0 116 56-176 224-339 (727)
309 2ft3_A Biglycan; proteoglycan, 99.5 6.7E-14 2.3E-18 140.4 12.5 133 40-176 30-172 (332)
310 2z62_A TOLL-like receptor 4, v 99.5 3.7E-14 1.3E-18 138.3 10.1 124 56-180 52-176 (276)
311 3oja_A Leucine-rich immune mol 99.5 2.1E-14 7.1E-19 151.9 8.7 132 43-180 109-240 (487)
312 2xwt_C Thyrotropin receptor; s 99.5 3.3E-14 1.1E-18 135.6 8.9 139 41-182 8-161 (239)
313 1xku_A Decorin; proteoglycan, 99.5 7.1E-14 2.4E-18 140.0 11.5 139 40-182 28-176 (330)
314 3zyi_A Leucine-rich repeat-con 99.5 5.5E-14 1.9E-18 147.3 11.0 137 45-182 56-201 (452)
315 2o6r_A Variable lymphocyte rec 99.5 1.2E-13 3.9E-18 125.4 11.6 121 58-182 9-129 (177)
316 3t6q_A CD180 antigen; protein- 99.5 5.6E-14 1.9E-18 152.7 11.2 124 55-180 32-156 (606)
317 4g8a_A TOLL-like receptor 4; l 99.5 6.1E-14 2.1E-18 152.8 9.8 134 56-190 445-583 (635)
318 3vq2_A TLR4, TOLL-like recepto 99.5 7.7E-14 2.6E-18 151.6 10.3 123 56-179 56-179 (606)
319 3oja_B Anopheles plasmodium-re 99.5 1.7E-13 5.9E-18 148.7 12.0 127 56-183 75-201 (597)
320 3zyj_A Leucine-rich repeat-con 99.5 1.6E-13 5.4E-18 143.2 11.2 137 45-182 45-190 (440)
321 2z63_A TOLL-like receptor 4, v 99.5 1.8E-13 6.3E-18 147.3 11.9 126 56-182 28-154 (570)
322 4b8c_D Glucose-repressible alc 99.5 6.6E-14 2.3E-18 154.9 8.4 106 72-182 216-321 (727)
323 2ell_A Acidic leucine-rich nuc 99.5 1.8E-13 6.1E-18 123.0 9.7 112 56-171 49-164 (168)
324 4ecn_A Leucine-rich repeat pro 99.4 7.2E-14 2.5E-18 156.4 8.5 122 56-182 491-624 (876)
325 2id5_A Lingo-1, leucine rich r 99.4 1.1E-13 3.7E-18 146.0 9.3 126 56-182 56-181 (477)
326 1wwl_A Monocyte differentiatio 99.4 2.8E-14 9.5E-19 141.9 4.3 110 56-167 95-215 (312)
327 4ezg_A Putative uncharacterize 99.4 1.5E-13 5.1E-18 127.1 8.6 119 57-181 45-163 (197)
328 2ifg_A High affinity nerve gro 99.4 2.1E-13 7.2E-18 137.6 10.4 110 42-168 7-118 (347)
329 2z80_A TOLL-like receptor 2, v 99.4 2.1E-13 7.3E-18 137.9 10.3 125 56-182 76-203 (353)
330 2z81_A CD282 antigen, TOLL-lik 99.4 1.4E-13 4.6E-18 147.8 9.4 125 56-181 50-176 (549)
331 3o6n_A APL1; leucine-rich repe 99.4 1.1E-13 3.9E-18 141.9 8.4 126 56-182 45-170 (390)
332 3t6q_A CD180 antigen; protein- 99.4 1.7E-13 5.9E-18 148.8 10.0 122 57-179 401-526 (606)
333 4ezg_A Putative uncharacterize 99.4 2.2E-13 7.6E-18 125.9 9.2 120 56-181 66-185 (197)
334 4glp_A Monocyte differentiatio 99.4 1.8E-13 6E-18 136.0 8.6 115 56-172 145-269 (310)
335 1wwl_A Monocyte differentiatio 99.4 2.8E-13 9.4E-18 134.7 10.1 117 56-174 149-273 (312)
336 2z63_A TOLL-like receptor 4, v 99.4 1.8E-13 6.2E-18 147.4 9.2 124 56-180 373-497 (570)
337 3g39_A Variable lymphocyte rec 99.4 4.1E-13 1.4E-17 121.0 9.8 104 41-145 7-118 (170)
338 3zyj_A Leucine-rich repeat-con 99.4 3.6E-13 1.2E-17 140.5 10.8 120 56-175 136-277 (440)
339 3o6n_A APL1; leucine-rich repe 99.4 5.7E-13 2E-17 136.6 12.0 125 56-182 69-194 (390)
340 2je0_A Acidic leucine-rich nuc 99.4 1.7E-13 5.7E-18 120.6 6.7 104 56-162 42-149 (149)
341 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 5E-13 1.7E-17 143.9 11.6 110 55-168 51-161 (562)
342 2z7x_B TOLL-like receptor 1, v 99.4 2.3E-13 7.8E-18 145.1 8.1 108 56-167 21-129 (520)
343 1a9n_A U2A', U2A'; complex (nu 99.4 1.8E-13 6.2E-18 124.1 6.1 120 56-182 19-145 (176)
344 2z7x_B TOLL-like receptor 1, v 99.4 5.3E-13 1.8E-17 142.2 10.7 123 55-181 323-448 (520)
345 3zyi_A Leucine-rich repeat-con 99.4 6E-13 2.1E-17 139.3 10.6 119 56-174 147-287 (452)
346 3cvr_A Invasion plasmid antige 99.4 4.2E-13 1.5E-17 143.6 9.3 132 29-184 33-170 (571)
347 3j0a_A TOLL-like receptor 5; m 99.4 5.8E-13 2E-17 150.4 10.4 120 56-176 48-171 (844)
348 3o53_A Protein LRIM1, AGAP0063 99.4 4.6E-13 1.6E-17 133.4 8.4 122 56-181 120-241 (317)
349 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 6.9E-13 2.4E-17 142.8 10.0 120 56-179 353-475 (562)
350 1ziw_A TOLL-like receptor 3; i 99.4 1.5E-12 5.1E-17 143.5 11.4 134 56-191 480-626 (680)
351 4glp_A Monocyte differentiatio 99.4 2.9E-13 9.8E-18 134.4 5.1 115 57-173 118-244 (310)
352 3oja_A Leucine-rich immune mol 99.3 2.9E-13 9.9E-18 143.1 4.6 112 57-174 35-165 (487)
353 1a9n_A U2A', U2A'; complex (nu 99.3 7.5E-13 2.6E-17 119.9 6.4 106 56-166 42-153 (176)
354 2ft3_A Biglycan; proteoglycan, 99.3 1.7E-12 5.9E-17 130.0 9.5 113 57-174 173-285 (332)
355 1h6t_A Internalin B; cell adhe 99.3 3.4E-12 1.2E-16 125.5 10.5 116 56-182 68-183 (291)
356 2xwt_C Thyrotropin receptor; s 99.3 1.2E-12 4E-17 124.8 6.6 112 56-171 55-173 (239)
357 1xku_A Decorin; proteoglycan, 99.3 6.3E-12 2.2E-16 125.7 12.1 114 56-174 171-284 (330)
358 2r9u_A Variable lymphocyte rec 99.3 5.3E-12 1.8E-16 114.1 10.2 104 42-147 11-122 (174)
359 3o53_A Protein LRIM1, AGAP0063 99.3 6.7E-13 2.3E-17 132.2 3.5 121 56-181 144-266 (317)
360 1xeu_A Internalin C; cellular 99.3 5.6E-12 1.9E-16 122.0 10.0 103 56-168 63-165 (263)
361 1ds9_A Outer arm dynein; leuci 99.3 2.1E-14 7.3E-19 132.9 -7.2 121 56-183 48-180 (198)
362 1ds9_A Outer arm dynein; leuci 99.3 2.5E-14 8.6E-19 132.4 -7.0 121 56-182 18-145 (198)
363 1h6u_A Internalin H; cell adhe 99.3 8.1E-12 2.8E-16 123.8 10.4 114 56-180 63-176 (308)
364 1h6u_A Internalin H; cell adhe 99.3 9.9E-12 3.4E-16 123.2 10.0 115 56-181 85-199 (308)
365 1h6t_A Internalin B; cell adhe 99.3 1.3E-11 4.4E-16 121.3 10.7 116 56-182 90-205 (291)
366 1xeu_A Internalin C; cellular 99.3 1.5E-11 5.3E-16 118.9 11.0 115 56-182 41-155 (263)
367 1m9s_A Internalin B; cell inva 99.3 9E-12 3.1E-16 134.6 10.2 114 56-180 65-178 (605)
368 1m9s_A Internalin B; cell inva 99.2 1.9E-11 6.4E-16 132.1 11.3 115 56-181 87-201 (605)
369 4ay9_X Follicle-stimulating ho 99.2 8E-12 2.7E-16 126.2 7.7 135 42-176 8-152 (350)
370 4fmz_A Internalin; leucine ric 99.2 1.4E-11 4.7E-16 124.1 9.3 114 57-179 200-313 (347)
371 1dce_A Protein (RAB geranylger 99.2 1.1E-11 3.7E-16 133.1 8.8 101 56-160 463-567 (567)
372 3cvr_A Invasion plasmid antige 99.2 7.1E-12 2.4E-16 134.1 6.3 107 57-181 121-234 (571)
373 1o6v_A Internalin A; bacterial 99.2 2.8E-11 9.6E-16 127.1 10.2 114 56-180 243-356 (466)
374 3bz5_A Internalin-J, INLJ; leu 99.2 6.1E-11 2.1E-15 124.1 11.9 99 57-167 43-141 (457)
375 1jl5_A Outer protein YOPM; leu 99.2 7.6E-11 2.6E-15 123.3 12.1 111 56-181 131-241 (454)
376 2ifg_A High affinity nerve gro 99.2 2.9E-11 1E-15 121.8 8.4 103 83-188 11-117 (347)
377 2ast_B S-phase kinase-associat 99.2 2.7E-12 9.1E-17 128.6 0.4 107 56-163 93-205 (336)
378 3bz5_A Internalin-J, INLJ; leu 99.2 1.1E-10 3.8E-15 122.1 11.8 100 56-167 127-226 (457)
379 1o6v_A Internalin A; bacterial 99.1 7.6E-11 2.6E-15 123.8 10.0 114 56-180 221-334 (466)
380 2ast_B S-phase kinase-associat 99.1 1.5E-12 5E-17 130.6 -3.1 125 56-182 70-200 (336)
381 4fmz_A Internalin; leucine ric 99.1 9E-11 3.1E-15 118.0 9.1 114 56-180 177-290 (347)
382 1jl5_A Outer protein YOPM; leu 99.1 7.8E-11 2.7E-15 123.2 7.8 109 56-176 257-382 (454)
383 3g06_A SSPH2 (leucine-rich rep 99.1 1.1E-10 3.6E-15 126.5 8.7 115 29-166 12-134 (622)
384 2ca6_A RAN GTPase-activating p 99.1 4.1E-12 1.4E-16 130.1 -2.5 123 57-179 95-246 (386)
385 3g06_A SSPH2 (leucine-rich rep 99.1 8.2E-11 2.8E-15 127.3 7.4 88 80-177 221-308 (622)
386 2ca6_A RAN GTPase-activating p 99.1 1.4E-11 4.7E-16 126.1 0.5 126 56-182 159-308 (386)
387 3goz_A Leucine-rich repeat-con 99.1 3.3E-11 1.1E-15 122.2 2.7 111 57-168 23-153 (362)
388 4ay9_X Follicle-stimulating ho 99.1 1.7E-10 5.9E-15 116.4 7.4 115 60-178 13-129 (350)
389 3goz_A Leucine-rich repeat-con 99.0 6E-11 2E-15 120.3 2.5 113 60-173 2-129 (362)
390 3tm0_A Aminoglycoside 3'-phosp 99.0 5.2E-10 1.8E-14 107.9 8.0 137 275-419 9-214 (263)
391 3rw6_A Nuclear RNA export fact 99.0 4E-11 1.4E-15 115.2 -1.1 142 41-186 76-260 (267)
392 1nd4_A Aminoglycoside 3'-phosp 98.9 3.2E-10 1.1E-14 108.9 4.4 119 289-419 29-215 (264)
393 1z7x_W Ribonuclease inhibitor; 98.9 1.2E-10 4.2E-15 121.8 -2.5 127 56-182 256-403 (461)
394 1z7x_W Ribonuclease inhibitor; 98.9 7.3E-11 2.5E-15 123.5 -4.2 117 56-173 227-361 (461)
395 3sg8_A APH(2'')-ID; antibiotic 98.8 4.6E-09 1.6E-13 103.6 7.3 154 285-447 25-288 (304)
396 3dxp_A Putative acyl-COA dehyd 98.8 1.1E-08 3.7E-13 103.5 9.1 130 285-419 43-249 (359)
397 3rw6_A Nuclear RNA export fact 98.7 5E-09 1.7E-13 100.5 2.8 80 77-159 167-257 (267)
398 3un9_A NLR family member X1; l 98.7 3.6E-09 1.2E-13 107.4 0.9 112 56-167 101-225 (372)
399 3un9_A NLR family member X1; l 98.6 1.2E-09 4E-14 111.0 -5.8 112 56-167 72-197 (372)
400 3sb4_A Hypothetical leucine ri 98.6 1.4E-07 4.7E-12 94.0 9.1 77 104-182 225-302 (329)
401 3ogk_B Coronatine-insensitive 98.5 1.6E-08 5.4E-13 109.1 0.0 125 56-181 378-517 (592)
402 3r70_A Aminoglycoside phosphot 98.4 5.2E-07 1.8E-11 89.5 10.1 130 281-419 38-238 (320)
403 1io0_A Tropomodulin; LRR prote 98.4 3.7E-08 1.3E-12 89.6 1.2 110 56-166 36-164 (185)
404 3sb4_A Hypothetical leucine ri 98.4 2.9E-07 9.8E-12 91.7 7.6 124 56-182 202-326 (329)
405 3ogk_B Coronatine-insensitive 98.3 2.2E-07 7.4E-12 100.2 4.3 105 57-163 139-253 (592)
406 3d1u_A Putative fructosamine-3 98.2 3.1E-06 1.1E-10 82.5 9.7 132 285-418 20-216 (288)
407 2p1m_B Transport inhibitor res 98.2 1.5E-07 5.1E-12 101.5 -1.6 122 57-182 106-240 (594)
408 3tdw_A Gentamicin resistance p 98.1 8.1E-06 2.8E-10 80.3 10.1 125 286-419 25-225 (306)
409 2p1m_B Transport inhibitor res 98.1 3E-07 1E-11 99.1 -1.0 125 56-182 372-511 (594)
410 3ovc_A Hygromycin-B 4-O-kinase 97.9 2.1E-05 7.3E-10 79.2 8.5 132 284-420 45-245 (362)
411 2ra8_A Uncharacterized protein 97.9 9.2E-07 3.1E-11 89.1 -1.8 109 56-168 172-294 (362)
412 1io0_A Tropomodulin; LRR prote 97.9 2.9E-06 9.9E-11 76.9 1.1 98 70-168 26-138 (185)
413 4gkh_A Aminoglycoside 3'-phosp 97.8 7.1E-05 2.4E-09 71.8 9.8 125 287-419 31-224 (272)
414 4fdw_A Leucine rich hypothetic 97.7 6.2E-05 2.1E-09 76.9 8.4 117 57-180 158-274 (401)
415 4fdw_A Leucine rich hypothetic 97.7 6.6E-05 2.2E-09 76.7 8.3 114 57-176 227-345 (401)
416 2ra8_A Uncharacterized protein 97.6 1.3E-05 4.3E-10 80.7 2.0 111 56-170 139-269 (362)
417 3ats_A Putative uncharacterize 97.6 2.9E-05 1E-09 77.9 4.7 32 388-419 222-253 (357)
418 2q83_A YTAA protein; 2635576, 97.5 0.00016 5.4E-09 71.8 8.4 46 387-439 221-266 (346)
419 2olc_A MTR kinase, methylthior 97.5 0.00017 5.9E-09 73.4 8.4 64 286-349 36-120 (397)
420 3e4g_A ATP synthase subunit S, 97.4 8.2E-05 2.8E-09 66.2 3.2 84 56-139 61-149 (176)
421 3f7w_A Putative fructosamine-3 97.2 0.0022 7.5E-08 62.0 11.9 66 285-350 20-96 (288)
422 3e4g_A ATP synthase subunit S, 97.1 9.4E-05 3.2E-09 65.8 0.8 92 72-164 53-150 (176)
423 3rfe_A Platelet glycoprotein I 97.0 0.0008 2.7E-08 56.8 5.7 55 60-117 12-67 (130)
424 3dxq_A Choline/ethanolamine ki 97.0 0.0012 4.1E-08 64.3 7.6 130 284-419 22-203 (301)
425 1zyl_A Hypothetical protein YI 97.0 0.0054 1.8E-07 60.3 12.2 130 287-419 33-224 (328)
426 2ppq_A HSK, HK, homoserine kin 96.9 0.0017 5.9E-08 63.7 7.6 161 270-439 7-231 (322)
427 3rfe_A Platelet glycoprotein I 96.8 0.0017 5.9E-08 54.7 6.0 36 131-166 33-68 (130)
428 2pyw_A Uncharacterized protein 96.7 0.0053 1.8E-07 62.8 9.8 31 388-419 232-262 (420)
429 3jr1_A Putative fructosamine-3 96.6 0.0034 1.2E-07 61.5 7.4 126 285-414 41-232 (312)
430 1nw1_A Choline kinase (49.2 KD 96.6 0.0031 1.1E-07 64.8 6.9 63 286-349 79-157 (429)
431 2qg7_A Ethanolamine kinase PV0 96.6 0.0039 1.3E-07 64.5 7.7 65 286-350 114-187 (458)
432 3feg_A Choline/ethanolamine ki 96.5 0.0035 1.2E-07 63.1 7.1 148 286-440 56-269 (379)
433 3csv_A Aminoglycoside phosphot 96.5 0.0038 1.3E-07 61.6 7.3 34 387-420 182-219 (333)
434 4gt6_A Cell surface protein; l 96.5 0.0086 2.9E-07 60.6 9.5 83 75-161 260-342 (394)
435 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00074 2.5E-08 61.1 1.2 37 57-93 42-83 (197)
436 3c5i_A Choline kinase; choline 96.4 0.0024 8.1E-08 64.2 4.7 45 388-440 212-256 (369)
437 4h09_A Hypothetical leucine ri 96.3 0.0066 2.2E-07 61.0 7.7 119 57-180 218-336 (379)
438 4fs7_A Uncharacterized protein 96.0 0.01 3.5E-07 60.0 7.1 101 74-180 291-391 (394)
439 4gt6_A Cell surface protein; l 96.0 0.0096 3.3E-07 60.3 6.9 104 57-165 266-369 (394)
440 4h09_A Hypothetical leucine ri 95.7 0.024 8.3E-07 56.8 8.7 99 75-177 212-310 (379)
441 3i1a_A Spectinomycin phosphotr 95.2 0.037 1.3E-06 54.7 7.5 33 388-420 206-238 (339)
442 4fs7_A Uncharacterized protein 95.1 0.042 1.4E-06 55.5 7.8 104 57-163 231-353 (394)
443 1pgv_A TMD-1, tropomodulin TMD 95.0 0.0073 2.5E-07 54.6 1.6 92 72-164 33-137 (197)
444 3mes_A Choline kinase; malaria 94.8 0.026 8.8E-07 57.6 5.3 147 286-440 76-306 (424)
445 3f2s_A CK, chetk-alpha, cholin 94.1 0.068 2.3E-06 54.0 6.5 47 388-441 244-296 (401)
446 2yle_A Protein spire homolog 1 94.1 0.26 8.9E-06 44.9 9.5 89 349-441 33-131 (229)
447 3g15_A CK, chetk-alpha, cholin 92.3 0.12 4.3E-06 52.2 5.3 44 390-440 246-295 (401)
448 2jwa_A Receptor tyrosine-prote 92.0 0.18 6.1E-06 32.9 3.8 18 211-228 17-34 (44)
449 2ks1_B Epidermal growth factor 91.4 0.12 4E-06 33.9 2.4 20 206-225 12-31 (44)
450 2l2t_A Receptor tyrosine-prote 91.4 0.24 8.3E-06 32.3 3.9 26 203-228 8-33 (44)
451 4ann_A ESSB; membrane protein, 86.6 0.46 1.6E-05 43.1 3.6 99 341-447 59-158 (215)
452 4ano_A ESSB; membrane protein, 83.6 0.72 2.5E-05 42.0 3.4 81 362-447 81-163 (219)
453 3cxl_A N-chimerin; SH2, RHO-GA 42.9 2.6 8.8E-05 43.3 -2.3 49 286-337 148-206 (463)
454 2klu_A T-cell surface glycopro 39.6 23 0.00077 25.0 2.8 16 212-227 14-29 (70)
455 2knc_A Integrin alpha-IIB; tra 37.9 49 0.0017 22.5 4.2 23 204-226 12-34 (54)
456 2l8s_A Integrin alpha-1; trans 37.8 38 0.0013 23.0 3.6 22 205-226 10-31 (54)
457 1cja_A Protein (actin-fragmin 35.6 92 0.0031 30.0 7.5 77 340-420 158-239 (342)
458 2k9y_A Ephrin type-A receptor 29.8 30 0.001 21.8 2.1 12 206-217 14-25 (41)
459 2lz0_A Uncharacterized protein 25.9 1.2E+02 0.0042 23.2 5.5 13 124-136 38-50 (100)
460 2k1a_A Integrin alpha-IIB; sin 22.5 93 0.0032 19.9 3.3 22 204-225 10-31 (42)
461 2lz0_A Uncharacterized protein 20.7 1.3E+02 0.0045 23.0 4.8 46 117-163 8-53 (100)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.8e-48 Score=384.23 Aligned_cols=225 Identities=24% Similarity=0.385 Sum_probs=178.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|...+.||+|+||.||+|++. ++..||||+++... ...++|.+|+++|++++|||| ..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 35667789999999999999863 36789999997543 335679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 342 VYKYMSNGTLYSLLHSNG-----------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
|||||++|+|.++|+..+ ...++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 3479999999999999999999999 99999999999999999999999
Q ss_pred EeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHH
Q 040267 411 MDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWID 464 (538)
Q Consensus 411 ~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 464 (538)
+|||+|+.... .++.++|||||||++|||+| |+.||...... .+...+
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i- 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECI- 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHH-
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH-
Confidence 99999974321 18899999999999999999 89999864321 122211
Q ss_pred HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 465 QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 465 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..+.... .+...+++ +.+++.+||+.||++||||+||.+.|+++.+..+
T Consensus 244 ---~~~~~~~------~p~~~~~~---~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 244 ---TQGRVLQ------RPRTCPQE---VYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp ---HHTCCCC------CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred ---HcCCCCC------CCccchHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 1222111 11122334 4455559999999999999999999999887643
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=384.90 Aligned_cols=223 Identities=25% Similarity=0.383 Sum_probs=174.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|...++||+|+||+||+|++. +++.||||+++... ...++|.+|+++|++++|||| ..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35666788999999999999864 47889999997543 335679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 342 VYKYMSNGTLYSLLHSNG-------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
|||||++|+|.++++... ...++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999997643 2369999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+|+.... .++.++|||||||++|||+| |+.||...... .+...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~ 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----EAIDC 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----HHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----HHHHH
Confidence 9999999985421 18899999999999999999 89999854321 12221
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+ ..+... .. +...+++ +.+|+.+||+.||++||||.||++.|+.+.+.
T Consensus 273 i----~~g~~~-----~~-p~~~~~~---~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 I----TQGREL-----ER-PRACPPE---VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp H----HHTCCC-----CC-CTTCCHH---HHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred H----HcCCCC-----CC-cccccHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1 111110 11 1122334 44555599999999999999999999998764
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.9e-48 Score=382.19 Aligned_cols=218 Identities=22% Similarity=0.340 Sum_probs=173.2
Q ss_pred CCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+...+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+.++++++|||| ..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 344578999999999999863 46789999997533 345789999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
||||++|+|.++|+... ...++|.++++|+.|||.||+|||+ .+||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCE
Confidence 99999999999997532 1368999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+|+.... .++.++|||||||++|||+| |+.||...... .+...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-----~~~~~ 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-----DVVEM 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----HHHHH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 9999999985321 18899999999999999999 89999864321 12222
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
+..+.... .+++....+.+|+.+||+.||++||||.||++.|+..
T Consensus 260 ----i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ----IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22222111 1112223455566699999999999999999999864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=373.24 Aligned_cols=226 Identities=24% Similarity=0.351 Sum_probs=175.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~ 346 (538)
+++...+.||+|+||+||+|++.+ .||||.++... ...++|.+|++++++++|||| ..+||||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~ 113 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcC
Confidence 456777899999999999999743 59999997533 234679999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.++++... ..++|.++.+|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 114 ~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 114 EGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp SSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999997654 369999999999999999999999 9999999999999999999999999999975321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||+||+.||...... ..+......+.. .+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--------~~~~~~~~~~~~----~p 257 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--------DQIIFMVGRGYA----SP 257 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--------HHHHHHHHTTCC----CC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcCCC----CC
Confidence 1677999999999999999999999753321 111111211111 11
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+. ..+......+.+++.+||+.||++||||.||++.|+.+...+
T Consensus 258 ~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 258 DLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred Ccc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 111 011112233445555999999999999999999999886543
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-46 Score=372.79 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=177.4
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~e~ 345 (538)
+|...+.||+|+||+||+|++ +|+.||||+++........+..|+..+.+++||||+ .||||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 456678999999999999998 689999999976443333345577777889999992 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-----HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|++|+|.++++... ++|..+.+++.|++.||+|||+.+ .++||||||||+|||+|+++++||+|||+|+...
T Consensus 83 ~~~gsL~~~l~~~~---l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 83 HEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCcHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999998754 999999999999999999999831 3499999999999999999999999999987432
Q ss_pred CC---------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccc------ccHHH
Q 040267 421 GD---------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK------GNLVN 461 (538)
Q Consensus 421 ~~---------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~------~~~~~ 461 (538)
.. ++.++|||||||++|||+||+.||......+... .....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 10 2457999999999999999988876433221110 00111
Q ss_pred HHHHHhccCCccccccccccCCC-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKG-YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.+......+.. ++.+.... ..+....+.+|+.+||+.||++||||.||++.|+++.++-+.
T Consensus 240 ~~~~~~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~i 301 (303)
T 3hmm_A 240 EMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp HHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCC
Confidence 22222222111 22221111 224556677788899999999999999999999999876543
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.2e-45 Score=365.12 Aligned_cols=215 Identities=20% Similarity=0.304 Sum_probs=170.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|++++++++|||| ..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788999999999999999995 569999999997543 234679999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
||++|+|.+++...+...+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999987665578999999999999999999999 9999999999999999999999999999986532
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++|||||||++|||+||+.||..... .+.+..... +.... +
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~-~~~~~-----~- 245 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIIS-GSFPP-----V- 245 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHH-TCCCC-----C-
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHc-CCCCC-----C-
Confidence 288999999999999999999999985432 122222221 11111 1
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.++.+++. +||+.||++|||+.|+++
T Consensus 246 ~~~~s~~~~~li~---~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 SLHYSYDLRSLVS---QLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 1123445565555 999999999999999986
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.2e-45 Score=371.37 Aligned_cols=232 Identities=20% Similarity=0.282 Sum_probs=182.2
Q ss_pred HHHHHHHhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCC-CCC-----
Q 040267 272 LVHLIAATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKH-PNL----- 337 (538)
Q Consensus 272 ~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H-~ni----- 337 (538)
.++.+...++|...+.||+|+||.||+|.+.. ++.||||.++... ...++|.+|+++|.+++| |||
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 34444556788999999999999999998532 3589999997543 234679999999999965 898
Q ss_pred -------cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCC
Q 040267 338 -------EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396 (538)
Q Consensus 338 -------~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 396 (538)
..++|||||++|+|.++|+... ...++|.+++.|+.|||.||+|||+ ++|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccC
Confidence 2369999999999999997532 2358999999999999999999999 999999999
Q ss_pred CCCeeeCCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCc
Q 040267 397 SSVILVDEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINA 450 (538)
Q Consensus 397 p~NIll~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~ 450 (538)
|+|||+++++.+||+|||+|+..... ++.++|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999865321 8899999999999999998 999998643
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+ .+ ...+..+.... . ++..+++ +.+++.+||+.||++||||.||++.|+++.+.
T Consensus 293 ~~~----~~----~~~i~~g~~~~-----~-p~~~~~~---~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 293 IDE----EF----CRRLKEGTRMR-----A-PDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CSH----HH----HHHHHHTCCCC-----C-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----HH----HHHHHcCCCCC-----C-CccCCHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 211 11 12222221111 1 1222334 44555599999999999999999999998765
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4e-44 Score=352.05 Aligned_cols=212 Identities=21% Similarity=0.275 Sum_probs=167.2
Q ss_pred CCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------ccEEE
Q 040267 283 SAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------KPLVY 343 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~ 343 (538)
...++||+|+||+||+|.. .++..||+|.+.... ...++|.+|++++++++||||+ .||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 3446799999999999995 468999999996533 2346799999999999999993 36899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeC-CCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVD-EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~ 420 (538)
|||++|+|.++++..+ .+++..+..|+.||+.||+|||+ .+ ||||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999998765 69999999999999999999998 66 99999999999998 47999999999998543
Q ss_pred CC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 421 GD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 421 ~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.. ++.++|||||||++|||+||+.||..... ..... .....+.....++
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~-~~i~~~~~~~~~~--- 252 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIY-RRVTSGVKPASFD--- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHH-HHHTTTCCCGGGG---
T ss_pred CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHH-HHHHcCCCCCCCC---
Confidence 21 88999999999999999999999975322 11111 1122211111111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.+++. +||+.||++|||+.|+++
T Consensus 253 --~~~~~~~~~li~---~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 --KVAIPEVKEIIE---GCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GCCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred --ccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 122334555555 999999999999999875
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-44 Score=360.50 Aligned_cols=221 Identities=17% Similarity=0.195 Sum_probs=176.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~~ 347 (538)
+.|...++||+|+||.||+|+. .+|+.||||+++.... ..+|+.++++++||||+ .|||||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 4577778999999999999995 4699999999975432 24799999999999993 469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTNG----- 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~----- 421 (538)
+|+|.++++..+ .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++ .+||+|||+|+....
T Consensus 134 gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 134 GGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999998765 69999999999999999999999 9999999999999999987 699999999975321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||+||+.||......+. +. .+ ... ... . .
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~-~i---~~~-~~~-~--~ 276 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CL-KI---ASE-PPP-I--R 276 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HH-HH---HHS-CCG-G--G
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HH-HH---HcC-CCC-c--h
Confidence 188999999999999999999999986443221 11 11 111 100 0 0
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.+ ....+.++.++++ +||+.||++|||+.|+++.|....++.+
T Consensus 277 ~~-~~~~s~~~~~li~---~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 277 EI-PPSCAPLTAQAIQ---EGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GS-CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred hc-CccCCHHHHHHHH---HHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 11 1223445555555 9999999999999999999998877654
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.6e-44 Score=359.49 Aligned_cols=213 Identities=19% Similarity=0.312 Sum_probs=172.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
..|+..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||| ..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4588888999999999999995 469999999996533 334668899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++... .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+.+...
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence 999999999864 49999999999999999999999 99999999999999999999999999999865321
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC-
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG- 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~- 482 (538)
|+.++|||||||++|||++|+.||......+ + ...... +. .+.+..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-----~---~~~i~~-~~-----~~~~~~~ 293 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----A---MKMIRD-NL-----PPRLKNL 293 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----H---HHHHHH-SS-----CCCCSCG
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----H---HHHHHc-CC-----CCCCCcc
Confidence 8899999999999999999999998643211 1 111111 10 111110
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +||+.||++|||+.|+++
T Consensus 294 ~~~s~~~~dli~---~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLD---RLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 112345566655 999999999999999876
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.2e-43 Score=343.83 Aligned_cols=211 Identities=19% Similarity=0.307 Sum_probs=165.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|+..+.||+|+||+||+|+. .+|+.||||.+++.. ...+++.+|++++++++||||+ .|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5899999999999999999994 569999999996532 2346799999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+ +|+|.+++...+ .+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 689999998766 69999999999999999999999 99999999999999999999999999999854321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||+||++|||+||+.||..... ....... ..+.. .+
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i-~~~~~------~~ 231 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNI-SNGVY------TL 231 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH-HHTCC------CC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHH-HcCCC------CC
Confidence 35789999999999999999999975332 1112111 11111 11
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....++++.++++ +||+.||++|||++|+++
T Consensus 232 -p~~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 -PKFLSPGAAGLIK---RMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -CTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCHHHHHHHH---HHccCChhHCcCHHHHHc
Confidence 1223445566655 999999999999999986
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.9e-44 Score=352.68 Aligned_cols=212 Identities=18% Similarity=0.253 Sum_probs=173.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||+||+|+. .+|+.||||++.+. ....+.+.+|+++|++++|||| ..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999995 56999999999743 2345679999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|||++|+|.+++...+ .+++.++..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999998765 59999999999999999999999 99999999999999999999999999999865311
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
++.++||||+||++|||+||+.||...+.. ....... .+.+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~-~~~~------ 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--------LIFAKII-KLEY------ 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCC------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-cCCC------
Confidence 788999999999999999999999854321 1111111 1111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+. +..++++.++++ +||+.||++|||++|++.
T Consensus 252 ~~p-~~~s~~~~dli~---~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 252 DFP-EKFFPKARDLVE---KLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CCC-TTCCHHHHHHHH---HHSCSSGGGSTTSGGGTC
T ss_pred CCC-cccCHHHHHHHH---HHccCCHhHCcChHHHcC
Confidence 111 123445666666 999999999999998753
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=360.58 Aligned_cols=213 Identities=19% Similarity=0.309 Sum_probs=173.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+.|+..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||| ..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4688889999999999999995 469999999997533 345668999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.++++.. .+++.++..|+.||+.||+|||+ .+||||||||+||||+.++.+||+|||+|+.+...
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 999999999865 49999999999999999999999 99999999999999999999999999999865321
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc-C
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT-G 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~ 482 (538)
|+.++|||||||++|||++|+.||......+ ....... + ..+.+. .
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--------~~~~i~~-~-----~~~~~~~~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRD-N-----LPPRLKNL 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHH-S-----CCCCCSCT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHc-C-----CCCCCccc
Confidence 8899999999999999999999998543211 1111111 1 011111 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.++++ +||+.||++|||+.|+++
T Consensus 371 ~~~s~~~~dli~---~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLD---RLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 223456666666 999999999999999876
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.7e-43 Score=346.87 Aligned_cols=207 Identities=19% Similarity=0.278 Sum_probs=161.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|+..+.||+|+||+||+|+.. +++.||||.+++.. ....++.+|++++++++|||| ..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46889999999999999999852 47899999997532 223568899999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||||++|+|.+++...+ .+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999998765 69999999999999999999999 9999999999999999999999999999985321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||+||++|||+||+.||...+.. +...... .+..
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~-~~~~------ 243 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--------ETMTMIL-KAKL------ 243 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCC------
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--------HHHHHHH-cCCC------
Confidence 1889999999999999999999999864322 1111111 1111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
.. ....+.++.++++ +||+.||++|||+
T Consensus 244 ~~-p~~~s~~~~~li~---~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 GM-PQFLSPEAQSLLR---MLFKRNPANRLGA 271 (304)
T ss_dssp CC-CTTSCHHHHHHHH---HHTCSSGGGSTTC
T ss_pred CC-CCcCCHHHHHHHH---HHcccCHHHCCCC
Confidence 01 1223445666666 9999999999985
No 15
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-41 Score=342.73 Aligned_cols=258 Identities=37% Similarity=0.640 Sum_probs=220.1
Q ss_pred cccccCHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------
Q 040267 266 PLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------ 337 (538)
Q Consensus 266 ~~~~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------ 337 (538)
....+++.++...+++|...+.||+|+||.||+|...+++.||||++.... ....++.+|++++++++||||
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 345788899999999999999999999999999998789999999997533 223468999999999999999
Q ss_pred -----cccEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 338 -----EKPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 338 -----~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 3469999999999999998754 245999999999999999999999933339999999999999999999999
Q ss_pred EeccCCcccCCC------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 411 MDFGFSRLTNGD------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 411 ~Dfg~a~~~~~~------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
+|||+++..... ++.++||||||+++|||+||+.||...............|+...
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999754321 57789999999999999999999974333333445678888887
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
........+.+..+...........+.+++.+||+.||++|||+.||++.|++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 777788888888888888888889999999999999999999999999999875433
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-41 Score=335.49 Aligned_cols=213 Identities=19% Similarity=0.280 Sum_probs=160.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE------------------ 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~------------------ 338 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|+++|++++||||+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4588889999999999999995 569999999996433 2346789999999999999992
Q ss_pred -----ccEEEeecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 339 -----KPLVYKYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 339 -----~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
.|+|||||++|+|.+++..... ...++..++.|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence 3689999999999999987652 235677789999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCC-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccc
Q 040267 413 FGFSRLTNG-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG 457 (538)
Q Consensus 413 fg~a~~~~~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 457 (538)
||+|+.... .++.++|||||||++|||++ ||.....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~------ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME------ 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH------
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH------
Confidence 999975321 18899999999999999996 7753110
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.. ......... .........+++.+||+.||++|||+.|+++
T Consensus 233 -~~~~~~~-~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 -RVRTLTD-VRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHH-HHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHH-HhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0111111 111111110 1112222344566999999999999999976
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.3e-40 Score=332.68 Aligned_cols=250 Identities=32% Similarity=0.537 Sum_probs=212.7
Q ss_pred ccCHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC----------
Q 040267 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL---------- 337 (538)
Q Consensus 269 ~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni---------- 337 (538)
.+.+.++...+++|...+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 345556677889999999999999999999998889999999987543 335679999999999999999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..++||||+++|+|.+++.... ...++|.++.+++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 3469999999999999997654 2359999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 415 FSRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 415 ~a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
+++.... .++.++||||||+++|||+||+.||......+ ......|.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESHNN 262 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHHTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhcccc
Confidence 9874321 16789999999999999999999998654432 23566777666666
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+.+...+++.+......+....+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 777778887777777778888888999999999999999999999999998754
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=341.28 Aligned_cols=165 Identities=23% Similarity=0.335 Sum_probs=145.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...+.||+|+||+||+|+. .+|+.||||+++.... ..+++.+|+++|++++||||+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688899999999999999995 5799999999975432 235688999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|||||||+ |+|.+++...+ .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 269999996 68999998765 69999999999999999999999 9999999999999999999999999999975
Q ss_pred cCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.. .++.++||||+||++|||++|+.||.+.+
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~ 267 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence 321 16889999999999999999999998644
No 19
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5e-39 Score=323.20 Aligned_cols=236 Identities=21% Similarity=0.250 Sum_probs=181.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~ 343 (538)
.++|...+.||+|+||.||+|+.. ++.||||+++........+..|+.++++++||||+ .++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 346788899999999999999874 78999999986555556677899999999999992 37999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CccccCCCCCCeeeCCCCCeEEEec
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP----------PCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~----------~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
||+++|+|.++++... +++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 102 e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 102 AFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp ECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred ecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999998754 9999999999999999999999 7 9999999999999999999999999
Q ss_pred cCCcccCCC------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccc-------
Q 040267 414 GFSRLTNGD------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK------- 456 (538)
Q Consensus 414 g~a~~~~~~------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~------- 456 (538)
|+++..... ++.++|||||||++|||+||+.||..........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999643211 2346799999999999999999998644322111
Q ss_pred -ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 457 -GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 457 -~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.....+..... .......+...... ......+.+++.+||+.||++|||+.||++.|+++.+..+
T Consensus 256 ~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~~ 321 (322)
T 3soc_A 256 HPSLEDMQEVVV-HKKKRPVLRDYWQK---HAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTN 321 (322)
T ss_dssp SCCHHHHHHHHT-TSCCCCCCCGGGGS---SHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CCchhhhhhhhh-cccCCCCccccccc---cchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 01122222111 11111111111111 1234446666669999999999999999999999987654
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.4e-39 Score=325.56 Aligned_cols=167 Identities=17% Similarity=0.287 Sum_probs=143.7
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
+....+.|...+.||+|+||+||+|+. .+++.||+|.+.... ...++.+|+++|..+ +|||| .
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 334567899999999999999999984 246789999987543 356788999999998 69999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSR 417 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 417 (538)
.|+||||+++|+|.+++. .+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+|||+|+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 469999999999999994 48999999999999999999999 999999999999999876 799999999996
Q ss_pred ccC----------------------------------------------------CCCCCccCcccHHHHHHHHHhCCCC
Q 040267 418 LTN----------------------------------------------------GDASLQKDVHGFGVVLLELVTGQKP 445 (538)
Q Consensus 418 ~~~----------------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p 445 (538)
... ..++.++||||+||++|||+||+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 321 0178899999999999999999999
Q ss_pred CCCCc
Q 040267 446 FEINA 450 (538)
Q Consensus 446 ~~~~~ 450 (538)
|....
T Consensus 247 f~~~~ 251 (361)
T 4f9c_A 247 FYKAS 251 (361)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 97543
No 21
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=8.5e-38 Score=311.67 Aligned_cols=247 Identities=29% Similarity=0.483 Sum_probs=198.4
Q ss_pred ccccCHHHHHHHhcCCCCC------CeEeecCCceEEEEEeCCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCC
Q 040267 267 LIKLKLVHLIAATSNFSAQ------NVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHP 335 (538)
Q Consensus 267 ~~~~~~~~l~~~~~~f~~~------~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ 335 (538)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||.+.... ...+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3468999999999999988 8999999999999987 68899999986422 2346799999999999999
Q ss_pred CC-----------cccEEEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 336 NL-----------EKPLVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 336 ni-----------~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
|| ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEc
Confidence 99 3469999999999999997532 2469999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCCC------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH
Q 040267 404 EDFDARIMDFGFSRLTNGD------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL 459 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 459 (538)
+++.+||+|||+++..... ++.++||||||+++|||++|+.||....... .+
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~ 243 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ----LL 243 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS----BT
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchH----HH
Confidence 9999999999998754321 5778999999999999999999998644322 12
Q ss_pred HHHHHHHhc-cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 460 VNWIDQLSS-SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 460 ~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
..+...... ...+.+.+++.+. .........+.+++.+||+.||.+|||+.+|++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222222211 1223344444432 3345566677788889999999999999999999998754
No 22
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7e-39 Score=337.33 Aligned_cols=228 Identities=20% Similarity=0.388 Sum_probs=184.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecC
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMS 347 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~ 347 (538)
..++|...+.||+|+||.||+|...++..||||.++......++|.+|++++++++|||| ..++||||++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~ 265 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 265 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecC
Confidence 456778889999999999999999888999999998766677899999999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.++++......+++..+.+++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 9999999986543358999999999999999999999 9999999999999999999999999999986432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||+| |+.||...... .+...+. ...... ..
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~---~~~~~~-------~~ 407 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALE---RGYRMP-------RP 407 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHH---HTCCCC-------CC
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH---cCCCCC-------CC
Confidence 16789999999999999999 99999753321 1111111 110100 01
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
...+++ +.+++.+||+.||++|||+.+|++.|+++......
T Consensus 408 ~~~~~~---l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 408 ENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp TTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred CCCCHH---HHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 122334 44555599999999999999999999988765443
No 23
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.5e-38 Score=309.48 Aligned_cols=222 Identities=23% Similarity=0.385 Sum_probs=181.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|...+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++|||| ..++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 4577788999999999999998888999999998777677889999999999999999 33699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 90 GCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp CBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999997654 368999999999999999999999 9999999999999999999999999999975422
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||...... ........... .. ...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~------~~-~~~ 230 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR------LY-KPR 230 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC------CC-CCT
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCcc------CC-CCC
Confidence 16789999999999999999 99999753321 11111111100 00 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+..+.++ +.+||+.||++|||+.|+++.|+++.++
T Consensus 231 ~~~~~~~~l---i~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQI---MNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHH---HHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 223444444 4499999999999999999999998864
No 24
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.8e-38 Score=324.13 Aligned_cols=225 Identities=22% Similarity=0.355 Sum_probs=172.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
.++|...+.||+|+||.||+|+.. ++..||||.++... ...+++.+|++++++++|||| ..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999854 47789999997532 234679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.++++..+ ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999998654 369999999999999999999999 9999999999999999999999999999875421
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++||||||+++|||++ |+.||...... .+...+ ..+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i----~~~~--- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAV----DEGY--- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHH----HTTE---
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----HcCC---
Confidence 16778999999999999998 99999753321 111111 1110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
...........+.+++.+||+.||++||++.||++.|+++.+..+
T Consensus 268 ------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 268 ------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp ------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred ------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 001111122335556669999999999999999999999977543
No 25
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.3e-38 Score=336.73 Aligned_cols=216 Identities=19% Similarity=0.243 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHH---HHHHHhcCCCCCCc-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLL---EMKQVGLLKHPNLE-----------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~H~ni~-----------~ 339 (538)
.++|...++||+|+||.||+|+. .+|+.||||++++.. .....+.+ ++.+++.++||||+ .
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999995 469999999996432 22233333 46777888999993 4
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+|||||+||+|.+++...+ .+++..+..|+.||+.||+|||+ .+||||||||+||||+.+|.+||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 69999999999999998765 69999999999999999999999 99999999999999999999999999999854
Q ss_pred CC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 420 NG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 420 ~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.. .++.++||||+||++|||++|+.||......+ ......... ....
T Consensus 343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~-~~~~----- 411 (689)
T 3v5w_A 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTL-TMAV----- 411 (689)
T ss_dssp SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHH-HCCC-----
T ss_pred CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhc-CCCC-----
Confidence 32 17889999999999999999999997533211 111111111 1111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
.+ ....+.++.++++ +||+.||.+|++ ++||++
T Consensus 412 -~~-p~~~S~~a~dLI~---~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 -EL-PDSFSPELRSLLE---GLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -CC-CTTSCHHHHHHHH---HHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -CC-CccCCHHHHHHHH---HHccCCHhHCCCCCCCCHHHHhc
Confidence 11 1223456666666 999999999998 677765
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.1e-38 Score=312.89 Aligned_cols=230 Identities=26% Similarity=0.428 Sum_probs=175.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
...++|...+.||+|+||.||+|.. +++.||||.+...... .+++.+|++++++++|||| ..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788889999999999999987 6889999999754322 3568899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999987541 248999999999999999999999 78 999999999999999999999999998643
Q ss_pred CC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 420 NG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 420 ~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.. .++.++||||||+++|||++|+.||...... .. ...........
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~---~~~~~~~~~~~--- 258 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QV---VAAVGFKCKRL--- 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HH---HHHHHHSCCCC---
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH---HHHHHhcCCCC---
Confidence 21 1678999999999999999999999853321 11 11111111100
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.+ ....+.++.+++ .+||+.||++|||+.|+++.|+.+.+....+
T Consensus 259 --~~-~~~~~~~l~~li---~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 259 --EI-PRNLNPQVAAII---EGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp --CC-CTTSCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred --CC-CccCCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 11 112233444444 4999999999999999999999998765444
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=316.03 Aligned_cols=225 Identities=24% Similarity=0.376 Sum_probs=177.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|... .+..||||.++... ...+.+.+|++++++++|||| ..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45777899999999999999964 34469999997532 334679999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
|||+++|+|.++++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999997653 369999999999999999999999 99999999999999999999999999999854321
Q ss_pred --------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 423 --------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 423 --------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
++.++||||||+++|||++ |+.||...... .+ ..........
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~---~~~~~~~~~~--- 273 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DV---ISSVEEGYRL--- 273 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HH---HHHHHTTCCC---
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HH---HHHHHcCCCC---
Confidence 5678999999999999999 99999753321 11 1111111000
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.. ....++++ .+++.+||+.||++|||+.||++.|+.+.+....
T Consensus 274 ---~~-~~~~~~~l---~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 274 ---PA-PMGCPHAL---HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ---CC-CTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ---CC-CCCcCHHH---HHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 00 11223344 4455599999999999999999999999876543
No 28
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.7e-38 Score=336.06 Aligned_cols=217 Identities=18% Similarity=0.327 Sum_probs=173.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|+++|+.++||||+ .|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 5789999999999999999995 569999999997543 3356788999999999999993 46999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC--CCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED--FDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++.... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 237 ~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 237 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999997543 269999999999999999999999 999999999999999854 89999999999865432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||+||++|||++|+.||......+ ...... ..... ++... .
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--------~~~~i~-~~~~~--~~~~~-~ 380 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--------TLRNVK-SCDWN--MDDSA-F 380 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHH-TTCCC--CCSGG-G
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHH-hCCCC--CCccc-c
Confidence 7889999999999999999999998643321 111111 11110 01111 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +||+.||.+|||+.|+++
T Consensus 381 ~~~s~~~~dli~---~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SGISEDGKDFIR---KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 123445566665 999999999999999986
No 29
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.2e-38 Score=333.22 Aligned_cols=228 Identities=22% Similarity=0.378 Sum_probs=182.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSN 348 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~ 348 (538)
.++|...+.||+|+||.||+|...++..||||.++......++|.+|++++++++|||| ..++||||+++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~ 262 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 262 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcC
Confidence 45677788999999999999999888889999998766667889999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 339 (452)
T 1fmk_A 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339 (452)
T ss_dssp CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence 999999986433469999999999999999999999 9999999999999999999999999999985432
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||+| |+.||...... .+ ... ...+... .. ..
T Consensus 340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~---~~~-i~~~~~~-----~~-~~ 404 (452)
T 1fmk_A 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EV---LDQ-VERGYRM-----PC-PP 404 (452)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HH---HHH-HHTTCCC-----CC-CT
T ss_pred CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HH---HHH-HHcCCCC-----CC-CC
Confidence 16789999999999999999 99999753321 11 111 1111100 00 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
..++. +.+++.+||+.||++|||+++|++.|+++.......
T Consensus 405 ~~~~~---l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 405 ECPES---LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp TSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred CCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 22334 445555999999999999999999999987655443
No 30
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.9e-38 Score=319.77 Aligned_cols=225 Identities=22% Similarity=0.346 Sum_probs=177.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe--------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML--------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|.. .++..||||.++... ...+++.+|+++++++ +||||
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35678889999999999999984 235579999997543 2346789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 3469999999999999998653 1358999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
+.++.+||+|||+++.... .++.++|||||||++|||+| |+.||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 9999999999999974321 16789999999999999999 99999864322
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+...+ ..+... .. ....+.++. +++.+||+.||++|||+.|+++.|+++....
T Consensus 313 -~~~~~~----~~~~~~-----~~-~~~~~~~l~---~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 -ELFKLL----KEGHRM-----DK-PANCTNELY---MMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp -GHHHHH----HTTCCC-----CC-CTTSCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -HHHHHH----hcCCCC-----CC-CCCCCHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 122111 111110 01 111233444 4555999999999999999999999987643
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.2e-38 Score=325.56 Aligned_cols=224 Identities=23% Similarity=0.370 Sum_probs=178.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|... +++.||||.++.... ..+++.+|++++++++|||| ..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356778899999999999999975 689999999975422 23468899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|+|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999998643 258999999999999999999999 99999999999999999999999999998753321
Q ss_pred -----------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
++.++|||||||++|||+| |+.||...... ..... ...+....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~----~~~~~~~~---- 335 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREF----VEKGGRLP---- 335 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHH----HHTTCCCC----
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH----HHcCCCCC----
Confidence 5678999999999999999 99999753321 11111 11111000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.....++++. +++.+||+.||++|||+.+|++.|+++.++.
T Consensus 336 --~~~~~~~~l~---~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 336 --CPELCPDAVF---RLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCCCHHHH---HHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0112233444 4555999999999999999999999998754
No 32
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.9e-38 Score=337.47 Aligned_cols=226 Identities=21% Similarity=0.370 Sum_probs=183.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|.... +..||||.++......++|.+|++++++++|||| ..++||||+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 4567788999999999999999754 8899999998766667889999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++.......+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 99999999987665579999999999999999999999 99999999999999999999999999999865321
Q ss_pred --------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++|||||||++|||+| |+.||...... .+...+. .+.. .. .
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~----~~~~-----~~-~ 440 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLE----KDYR-----ME-R 440 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHH----TTCC-----CC-C
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH----cCCC-----CC-C
Confidence 5678999999999999999 99999764321 1222221 1100 00 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
....+++ +.+++.+||+.||++|||+.+|++.|+.+.++..
T Consensus 441 ~~~~~~~---l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 481 (495)
T 1opk_A 441 PEGCPEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481 (495)
T ss_dssp CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSC
T ss_pred CCCCCHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHHhccc
Confidence 1122334 4455559999999999999999999998765443
No 33
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1e-37 Score=309.42 Aligned_cols=232 Identities=22% Similarity=0.302 Sum_probs=176.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
++|...+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|++++++++||||+ .+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4677789999999999999984 358899999997543 3346789999999999999992 46
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999998764 258999999999999999999999 999999999999999999999999999998542
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccc-------cccccHHHHHHHHh
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEE-------GYKGNLVNWIDQLS 467 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 467 (538)
. .++.++||||||+++|||+||..|+....... .........+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 2 16789999999999999999999987432110 00001111111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+... . .....++++. +++.+||+.||++|||+.|+++.|+++.+++
T Consensus 246 ~~~~~~-----~-~~~~~~~~l~---~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 246 KNNGRL-----P-RPDGCPDEIY---MIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HTTCCC-----C-CCTTCCHHHH---HHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hccCcC-----C-CCcCcCHHHH---HHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111100 0 0112233444 4555999999999999999999999998765
No 34
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.8e-38 Score=308.20 Aligned_cols=223 Identities=19% Similarity=0.303 Sum_probs=178.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++|...+.||+|+||.||+|...++..||+|.++......+++.+|++++.+++|||| ..++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 44677789999999999999999888899999998777677889999999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 103 NGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 999999997633 259999999999999999999999 9999999999999999999999999999975422
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||+| |+.||...... ........ +. .. ...
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~-~~-----~~-~~~ 243 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQ-GL-----RL-YRP 243 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHT-TC-----CC-CCC
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhc-cc-----CC-CCC
Confidence 16789999999999999998 99999753321 11111111 10 00 011
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...++.+. +++.+||+.||++|||+.|+++.|+++.++
T Consensus 244 ~~~~~~l~---~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVY---TIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHH---HHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHH---HHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 12233444 455599999999999999999999998765
No 35
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.1e-37 Score=301.48 Aligned_cols=223 Identities=24% Similarity=0.400 Sum_probs=181.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++|...+.||+|+||.||+|...++..||+|.++......+++.+|++++.+++|||| ..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 35677889999999999999998888899999998777677889999999999999999 3369999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----- 422 (538)
+|+|.+++...+ ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 87 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 87 NGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999997653 258999999999999999999999 99999999999999999999999999999754321
Q ss_pred -------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||||+++|||+| |+.||...... ........... . ...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---~----~~~ 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR---L----YRP 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC---C----CCC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC---C----CCC
Confidence 5679999999999999999 99999753321 11111111110 0 011
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...++.+.+ ++.+||+.||++|||+.|+++.|+++.++
T Consensus 228 ~~~~~~l~~---li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQ---IMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHH---HHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 122344444 44599999999999999999999988754
No 36
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-37 Score=327.23 Aligned_cols=222 Identities=22% Similarity=0.360 Sum_probs=179.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|.. .++.||||.++... ..+.|.+|++++++++|||| ..++||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 45677889999999999999998 47899999998644 45789999999999999999 246999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.+++...+...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 99999999987665558999999999999999999999 9999999999999999999999999999874322
Q ss_pred ---------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||+| |+.||...... .+...+ ..+... . .....
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i----~~~~~~-----~-~p~~~ 411 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRV----EKGYKM-----D-APDGC 411 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHH----HTTCCC-----C-CCTTC
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----HcCCCC-----C-CCCcC
Confidence 17889999999999999999 99999854322 122211 111100 0 01122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+.++. +++.+||+.||++|||+.++++.|+++...
T Consensus 412 ~~~l~---~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 412 PPAVY---DVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 33444 455599999999999999999999998754
No 37
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.8e-37 Score=306.84 Aligned_cols=226 Identities=23% Similarity=0.354 Sum_probs=171.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhc--CCCCCCc---------------ccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGL--LKHPNLE---------------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~ni~---------------~~l 341 (538)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..|.+++.. ++||||. .++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 45788889999999999999998 78999999987533 4556666666665 7999992 359
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH--------HCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
||||+++|+|.++++.. .+++..+.+++.|++.||+||| + .+|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeC
Confidence 99999999999999654 4999999999999999999999 7 99999999999999999999999999
Q ss_pred cCCcccCCC---------------------------------CCCccCcccHHHHHHHHHhC----------CCCCCCCc
Q 040267 414 GFSRLTNGD---------------------------------ASLQKDVHGFGVVLLELVTG----------QKPFEINA 450 (538)
Q Consensus 414 g~a~~~~~~---------------------------------~~~~~DV~S~Gvvl~elltg----------~~p~~~~~ 450 (538)
|+++..... ++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 998632110 12589999999999999999 78886533
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.... ................. +.... ........+.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~---~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDP---SFEDMRKVVCVDQQRPN-IPNRW---FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSC---CHHHHHHHHTTSCCCCC-CCGGG---GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCc---chhhhhHHHhccCCCCC-CChhh---ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3221 11111111111111111 11110 1223445566677799999999999999999999976
No 38
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=304.00 Aligned_cols=225 Identities=24% Similarity=0.380 Sum_probs=180.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc-cccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+... ....+.+.+|++++++++||||+ .++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4677789999999999999996 46899999988653 34456799999999999999993 36999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------ 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------ 420 (538)
++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 90 KGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999998754 369999999999999999999999 999999999999999999999999999996431
Q ss_pred -------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCccccccc-ccHHHHHHHHhc
Q 040267 421 -------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK-GNLVNWIDQLSS 468 (538)
Q Consensus 421 -------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~ 468 (538)
..++.++||||||+++|||++|..|+.......... ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-- 243 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--
Confidence 116789999999999999999999987644332211 1122221111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.. ...+.. +.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 244 -----------~~-~~~~~~---l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 244 -----------CP-PNCPPS---FFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp -----------CC-TTCCTT---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----------CC-CCCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 01 111223 4445559999999999999999999999987653
No 39
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.1e-37 Score=316.80 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=183.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc------------cHHHHHHHHHHHhcCCCCCCc-
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL------------GEKQFLLEMKQVGLLKHPNLE- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~H~ni~- 338 (538)
..++|...+.||+|+||.||+|...+ ++.||||.+..... ....+..|+..+..++||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578888999999999999998654 47899999865321 112344566677888999992
Q ss_pred --------------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-
Q 040267 339 --------------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD- 403 (538)
Q Consensus 339 --------------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~- 403 (538)
.++||||+ +|+|.+++.... ..+++.+++.|+.|++.||+|||+ .+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEec
Confidence 47999999 999999998753 369999999999999999999999 9999999999999999
Q ss_pred -CCCCeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 404 -EDFDARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 404 -~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
.++.+||+|||+++.... .++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999964311 1678899999999999999999999853221
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
.....+..... ...+..++++.+.....++++..+++ .||+.||.+||++.+|++.|+++.++.+...+
T Consensus 268 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~---~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 268 ----PKYVRDSKIRY-RENIASLMDKCFPAANAPGEIAKYME---TVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp ----HHHHHHHHHHH-HHCHHHHHHHHSCTTCCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred ----HHHHHHHHHHh-hhhHHHHHHHhcccccCHHHHHHHHH---HHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 11222221111 12344455555544444556666555 99999999999999999999999998877654
No 40
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-36 Score=301.85 Aligned_cols=215 Identities=18% Similarity=0.320 Sum_probs=171.3
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|. ..+++.||||.+.... ...+.+.+|+.++++++||||+ .++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4578899999999999999999 4579999999986433 3456789999999999999993 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... +++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 99 ~~~~~L~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp CTTCBHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCCCCHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 99999999998753 8999999999999999999999 9999999999999999999999999999875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||+||+.||...... .........+.. .... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~-~~~~----~ 239 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTP-ELQN----P 239 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCSC-CCSC----G
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC-CCCC----c
Confidence 1678999999999999999999999753321 111111111110 0000 0
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+..+.+ ++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~---li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRD---FLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHH---HHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHH---HHHHHccCChhHCcCHHHHhh
Confidence 112334444 445999999999999999986
No 41
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-37 Score=305.82 Aligned_cols=226 Identities=22% Similarity=0.386 Sum_probs=182.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSN 348 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~ 348 (538)
.++|...+.||+|+||.||+|...++..||+|.++......+.+.+|++++++++|||| ..++||||+++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN 91 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCC
Confidence 34677889999999999999998888899999998766667889999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------ 422 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------ 422 (538)
|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 999999976433358999999999999999999999 99999999999999999999999999999754321
Q ss_pred ------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
++.++||||||+++|||++ |+.||...... ....... .+. . .. ...
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~-~~~-~----~~-~~~ 233 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLE-RGY-R----MV-RPD 233 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHH-TTC-C----CC-CCT
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHh-ccc-C----CC-Ccc
Confidence 5668999999999999999 99999753221 1111111 110 0 00 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..++++.+ ++.+|++.||++|||+.++++.|+++.....
T Consensus 234 ~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 234 NCPEELYQ---LMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred cccHHHHH---HHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 22334444 5559999999999999999999999887654
No 42
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.7e-37 Score=301.43 Aligned_cols=222 Identities=24% Similarity=0.388 Sum_probs=181.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|...+.||+|+||.||+|...+++.||+|.++......+++.+|++++++++|||| ..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 4577788999999999999998888899999998776667889999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 88 GCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp CBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999998754 368999999999999999999999 9999999999999999999999999999875421
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||...... ........ +. . .. ...
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~i~~-~~-~----~~-~~~ 228 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDIST-GF-R----LY-KPR 228 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHT-TC-C----CC-CCT
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--------HHHHHHhc-CC-c----CC-CCc
Confidence 16778999999999999999 89999753221 11111111 10 0 00 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+..+.+ ++.+||+.||++|||+.|+++.|+++.++
T Consensus 229 ~~~~~l~~---li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 LASTHVYQ---IMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22334444 44599999999999999999999998864
No 43
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=309.03 Aligned_cols=241 Identities=22% Similarity=0.313 Sum_probs=174.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHH--HHHHhcCCCCCCcc----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLE--MKQVGLLKHPNLEK----------------P 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E--~~~l~~l~H~ni~~----------------~ 340 (538)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..| +..+..++||||.+ +
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 35788889999999999999987 78999999997543 3344444 44455689999922 5
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CccccCCCCCCeeeCCCCCeEEE
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP---------PCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~---------~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
+||||+++|+|.+++.... .++..+.+++.|++.||+|||+ . +|+||||||+|||++.++.+||+
T Consensus 89 lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEe
Confidence 8999999999999998765 6899999999999999999999 6 99999999999999999999999
Q ss_pred eccCCcccCCC--------------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccc
Q 040267 412 DFGFSRLTNGD--------------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEE 453 (538)
Q Consensus 412 Dfg~a~~~~~~--------------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~ 453 (538)
|||+++..... ++.++|||||||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 99999754210 2247899999999999999987765433322
Q ss_pred cccccHH---------HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 454 GYKGNLV---------NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 454 ~~~~~~~---------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
....... ...............+..... ........+.+++.+||+.||++|||+.|+++.|+++...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 1111110 111111111111111111111 11223445666666999999999999999999999999887
Q ss_pred CCCccc
Q 040267 525 GFSEFY 530 (538)
Q Consensus 525 ~~~~~~ 530 (538)
...+-.
T Consensus 321 ~~~~~~ 326 (336)
T 3g2f_A 321 ERNKSV 326 (336)
T ss_dssp CC----
T ss_pred HhcccC
Confidence 665433
No 44
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.8e-36 Score=302.96 Aligned_cols=225 Identities=18% Similarity=0.267 Sum_probs=178.2
Q ss_pred ccCHHHHHHHhcC----------CCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCC
Q 040267 269 KLKLVHLIAATSN----------FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPN 336 (538)
Q Consensus 269 ~~~~~~l~~~~~~----------f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~n 336 (538)
.++.+++..+++. |...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 5788888888765 556678999999999999965 79999999997533 44577899999999999999
Q ss_pred C-----------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC
Q 040267 337 L-----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED 405 (538)
Q Consensus 337 i-----------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 405 (538)
| ..++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence 9 346999999999999998754 49999999999999999999999 999999999999999999
Q ss_pred CCeEEEeccCCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHH
Q 040267 406 FDARIMDFGFSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 406 ~~~kl~Dfg~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 462 (538)
+.+||+|||+++.... .++.++||||||+++|||++|+.||...... ..
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--------~~ 249 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--------QA 249 (321)
T ss_dssp CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HH
T ss_pred CcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HH
Confidence 9999999999875432 1678899999999999999999999753221 11
Q ss_pred HHHHhccCCccccccccccC-CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTG-KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...... .. .+.+.. ...+.++.++++ +||+.||++|||+.|+++.
T Consensus 250 ~~~~~~-~~-----~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRD-SP-----PPKLKNSHKVSPVLRDFLE---RMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHH-SS-----CCCCTTGGGSCHHHHHHHH---HHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhc-CC-----CCCcCccccCCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 111111 11 011100 112334445555 9999999999999999874
No 45
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.3e-37 Score=313.44 Aligned_cols=221 Identities=23% Similarity=0.369 Sum_probs=172.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC----EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS----MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|+.. +++ .||+|.++... ...+++.+|+.++++++||||+ .++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v 94 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 45778899999999999999953 444 36888886432 4457899999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999998754 369999999999999999999999 9999999999999999999999999999875321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++|||||||++|||+| |+.||...... .+...+. .+..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~----~~~~---- 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILE----KGER---- 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCC----
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-----HHHHHHH----cCCC----
Confidence 16789999999999999999 99999864332 1222211 1110
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
..........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 238 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 -----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00111122345556669999999999999999999999865
No 46
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.1e-38 Score=336.04 Aligned_cols=229 Identities=22% Similarity=0.368 Sum_probs=184.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecC
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMS 347 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~ 347 (538)
..++|...+.||+|+||.||+|...++..||||+++......++|.+|++++++++||||+ .++||||++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~ 344 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 344 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhc
Confidence 3456778889999999999999998888899999987666678899999999999999993 469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.++++......+++.++++++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 9999999986433468999999999999999999999 9999999999999999999999999999986532
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||+| |+.||...... .+.. . +..+.... . .
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~---~-i~~~~~~~-----~-~ 486 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD---Q-VERGYRMP-----C-P 486 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHH---H-HHTTCCCC-----C-C
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---H-HHcCCCCC-----C-C
Confidence 16789999999999999999 99999753221 1111 1 11111000 0 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
...+++ +.+++.+||+.||++|||+.+|++.|+++.......
T Consensus 487 ~~~~~~---l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~ 528 (535)
T 2h8h_A 487 PECPES---LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528 (535)
T ss_dssp TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCS
T ss_pred CCCCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcc
Confidence 122334 445555999999999999999999999887655443
No 47
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.3e-37 Score=317.32 Aligned_cols=234 Identities=20% Similarity=0.276 Sum_probs=182.8
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC---
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL--- 337 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni--- 337 (538)
+...+.....++|...+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++.++ +||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455556678899999999999999999973 246799999997543 2235699999999999 79999
Q ss_pred ---------cccEEEeecCCCCHHHHhhcCCC------------------------------------------------
Q 040267 338 ---------EKPLVYKYMSNGTLYSLLHSNGN------------------------------------------------ 360 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 360 (538)
..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 25689999999999999986532
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 361 ----------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 361 ----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 128999999999999999999999 9999999999999999999999999999975422
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||+| |+.||......+ .+... ...+...
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~----~~~~~~~----- 315 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRR----LKEGTRM----- 315 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHH----HHHTCCC-----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHH----HHcCCCC-----
Confidence 16789999999999999998 999997543211 11111 1111110
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.. ....+.++. +++.+||+.||++|||+.||++.|+++.+.
T Consensus 316 ~~-~~~~~~~l~---~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 316 RA-PDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC-CCCCCHHHH---HHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 00 112233444 455599999999999999999999998764
No 48
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.1e-36 Score=299.18 Aligned_cols=227 Identities=24% Similarity=0.362 Sum_probs=175.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... ..+|+|.++... ...+.+.+|++++++++|||| ..++||||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 112 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW 112 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEec
Confidence 357888899999999999999864 358999887533 234678999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 113 CEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred CCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999997544 369999999999999999999999 9999999999999999999999999999874321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||++|+.||......+ .+... ...+.......
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~----~~~~~~~~~~~ 260 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFM----VGRGYASPDLS 260 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHH----HHHTCCCCCST
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH----HHHHH----HhcCCCCcchh
Confidence 15668999999999999999999997533211 11111 11111111000
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. +. ...++++.+ ++.+||+.||++|||+.||++.|+.+...+
T Consensus 261 ~-~~-~~~~~~l~~---li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 K-LY-KNCPKAMKR---LVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp T-SC-SSSCHHHHH---HHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred h-hh-cCCcHHHHH---HHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 0 10 112334444 455999999999999999999999988665
No 49
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-37 Score=308.13 Aligned_cols=230 Identities=21% Similarity=0.366 Sum_probs=186.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
..++|...+.||+|+||.||+|... ++..||+|.+.......+++.+|++++++++|||| ..++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 3456788899999999999999965 48899999998766667889999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 167 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence 999999999988665679999999999999999999999 99999999999999999999999999999765421
Q ss_pred ---------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||||+++|||++ |+.||...... .+...+.... ....
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~---------~~~~ 233 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDY---------RMER 233 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTC---------CCCC
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccC---------CCCC
Confidence 6778999999999999999 99999754321 1222211100 0000
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
....++.+.+ ++.+|++.||.+|||+.|+++.|+++.++...++
T Consensus 234 -~~~~~~~l~~---li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~~ 277 (288)
T 3kfa_A 234 -PEGCPEKVYE---LMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277 (288)
T ss_dssp -CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHH---HHHHHhCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 1122334444 4559999999999999999999999887655443
No 50
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5e-37 Score=299.94 Aligned_cols=222 Identities=22% Similarity=0.356 Sum_probs=175.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+. +++.||||.++... ...+++.+|+.++++++|||| ..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 4677889999999999999998 48899999997543 234579999999999999999 236999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||+++|+|.+++.......+++.++..++.|++.||+|||+ .+ |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999988765569999999999999999999999 77 99999999999999999999999988764332
Q ss_pred C---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 D---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
. ++.++||||||+++|||++|+.||...... .........+. .+..
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~-----~~~~ 232 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--------EIGMKVALEGL-----RPTI 232 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--------HHHHHHHHSCC-----CCCC
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--------HHHHHHHhcCC-----CCCC
Confidence 1 233799999999999999999999753321 11111111111 1111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. ...+.++.+++ .+||+.||++|||+.|+++.|+++.+
T Consensus 233 ~-~~~~~~~~~li---~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 P-PGISPHVSKLM---KICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp C-TTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred C-CCCCHHHHHHH---HHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 12233444444 49999999999999999999998864
No 51
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1e-36 Score=306.88 Aligned_cols=214 Identities=20% Similarity=0.345 Sum_probs=172.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+++++.++|||| ..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788889999999999999995 679999999997543 234568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999998765 59999999999999999999999 99999999999999999999999999999754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++|||||||++|||++|+.||..... ........ .+... +
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~-~~~~~------~ 233 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--------KELRERVL-RGKYR------I 233 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH-HCCCC------C
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHH-hCCCC------C
Confidence 34789999999999999999999985332 11121111 11110 0
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+...+.++..+++ +||+.||.+|||++|+++.
T Consensus 234 -p~~~s~~~~~li~---~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 -PFYMSTDCENLLK---RFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CTTSCHHHHHHHH---HHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 1123345555555 9999999999999999863
No 52
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5e-37 Score=308.43 Aligned_cols=232 Identities=22% Similarity=0.360 Sum_probs=170.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCC-CC---EEEEEEcccc---cccHHHHHHHHHHHhcCCCCCCc-----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLD-GS---MLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNLE----------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~-~~---~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni~----------- 338 (538)
...++|...+.||+|+||.||+|.... +. .||||.++.. ....+++.+|++++++++||||+
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678999999999999999999544 32 8999999753 23356799999999999999991
Q ss_pred ------ccEEEeecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 339 ------KPLVYKYMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 339 ------~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
.++||||+++|+|.+++.... ...+++.++.+++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCE
Confidence 179999999999999996532 2258999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+++.... .++.++||||||+++|||++ |+.||...... .+...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~ 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIYNY 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-----HHHHH
Confidence 9999999975422 16789999999999999999 99999864332 11111
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
+ ...... .. ....++++ .+++.+||+.||++|||+.|+++.|+++.+.......
T Consensus 252 ~---~~~~~~------~~-~~~~~~~l---~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 252 L---IGGNRL------KQ-PPECMEEV---YDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp H---HTTCCC------CC-CTTCCHHH---HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred H---hcCCCC------CC-CCccCHHH---HHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 1 111100 00 11122344 4455599999999999999999999999887665543
No 53
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=314.79 Aligned_cols=227 Identities=23% Similarity=0.322 Sum_probs=178.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|... ++..||||+++... ...+++.+|+++++++ +||||
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356788899999999999999842 23579999997543 2336789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++..... ..+++.++++|+.|++.||+|||+ .+|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence 34699999999999999987541 359999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
++++.+||+|||+++.... .++.++|||||||++|||++ |+.||......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999999975432 16779999999999999999 99999753221
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
..... ...+.... . ....++++.. ++.+||+.||++|||+.||++.|+++......
T Consensus 301 ----~~~~~-~~~~~~~~-----~-~~~~~~~l~~---li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 301 ----ELFKL-LKEGHRMD-----K-PSNCTNELYM---MMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp ----HHHHH-HHTTCCCC-----C-CSSCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred ----HHHHH-HHcCCCCC-----C-CccCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 11111 11111110 0 1122334444 55599999999999999999999999876543
No 54
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.6e-37 Score=306.53 Aligned_cols=224 Identities=23% Similarity=0.353 Sum_probs=177.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.++|...+.||+|+||.||+|.. .++..||||.++... ...+++.+|++++++++|||| ..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45678889999999999999985 235789999997543 234678999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN----------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp 397 (538)
++||||+++|+|.+++..... ..+++.++.+++.|++.||+|||+ .+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence 699999999999999986532 248999999999999999999999 9999999999
Q ss_pred CCeeeCCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcc
Q 040267 398 SVILVDEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINAS 451 (538)
Q Consensus 398 ~NIll~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~ 451 (538)
+||++++++.+||+|||+++..... ++.++||||||+++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999754221 5778999999999999999 9999976433
Q ss_pred cccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. .+...+. .+... .. ....++++. +++.+||+.||++|||+.|+++.|+++.++
T Consensus 259 ~-----~~~~~~~----~~~~~-----~~-~~~~~~~~~---~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 E-----RLFNLLK----TGHRM-----ER-PDNCSEEMY---RLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G-----GHHHHHH----TTCCC-----CC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H-----HHHHHhh----cCCcC-----CC-CccCCHHHH---HHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2 1222111 11100 01 112233444 455599999999999999999999998764
No 55
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.8e-37 Score=301.32 Aligned_cols=222 Identities=21% Similarity=0.386 Sum_probs=173.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc--------HHHHHHHHHHHhcCCCCCCc---------ccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG--------EKQFLLEMKQVGLLKHPNLE---------KPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~E~~~l~~l~H~ni~---------~~l 341 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+...... .+++.+|++++++++||||. .++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 5688889999999999999995 57899999998643211 16789999999999999993 369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCC-----eEEEecc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFD-----ARIMDFG 414 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl~Dfg 414 (538)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++. +||+|||
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 999999999999987654 369999999999999999999999 78 999999999999988776 9999999
Q ss_pred CCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 415 FSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 415 ~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
+++..... ++.++||||||+++|||++|+.||...... -..+.......+ .
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~-~ 247 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIKFINMIREEG-L 247 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC------HHHHHHHHHHSC-C
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc------HHHHHHHHhccC-C
Confidence 98743221 467899999999999999999999753321 111121111111 1
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
. +.+. ...++++.+ ++.+||+.||++|||+.|+++.|+++
T Consensus 248 ~----~~~~-~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 R----PTIP-EDCPPRLRN---VIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C----CCCC-TTSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C----CCCC-cccCHHHHH---HHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1 1111 122334444 44599999999999999999999864
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=306.07 Aligned_cols=214 Identities=20% Similarity=0.317 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+ .++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788899999999999999995 579999999996543 2235688999999999999993 359999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 89 ~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999997765 59999999999999999999999 99999999999999999999999999998743211
Q ss_pred -----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
++.++|||||||++|||++|+.||..... ......... +...
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--------~~~~~~i~~-~~~~------ 228 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--------MALYKKIMR-GKYD------ 228 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHH-TCCC------
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHc-CCCC------
Confidence 37889999999999999999999985322 111222111 1110
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+ ....+.++..+++ +||+.||++|||+.|+++.
T Consensus 229 ~-p~~~s~~~~~li~---~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 229 V-PKWLSPSSILLLQ---QMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp C-CTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHTC
T ss_pred C-CCCCCHHHHHHHH---HHcccCHhHCcCHHHHhcC
Confidence 1 1122344445555 9999999999999999874
No 57
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-36 Score=311.63 Aligned_cols=229 Identities=24% Similarity=0.380 Sum_probs=173.4
Q ss_pred CCCCCeEeecCCceEEEEEeC--CC--CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEEE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL--DG--SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLVY 343 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~--~~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv~ 343 (538)
|...+.||+|+||.||+|... ++ ..||+|.++... ...+++.+|+.++++++|||| ..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 555678999999999999853 22 368999987533 334679999999999999999 236999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 171 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp ECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred ECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999998654 358999999999999999999999 9999999999999999999999999999974321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||+| |..||...... .+...+. .+.. .
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~~~~~~~----~~~~--~ 315 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL----QGRR--L 315 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----CHHHHHH----TTCC--C
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----HHHHHHH----cCCC--C
Confidence 16789999999999999999 67777653321 2222211 1110 0
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCccccc
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~ 532 (538)
......++.+ .+++.+||+.||++|||+.|+++.|+++...+........
T Consensus 316 ----~~p~~~~~~l---~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~~~ 365 (373)
T 3c1x_A 316 ----LQPEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 365 (373)
T ss_dssp ----CCCTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBCCC
T ss_pred ----CCCCCCCHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccceeec
Confidence 0112223344 4455599999999999999999999999988765554433
No 58
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.7e-37 Score=308.36 Aligned_cols=237 Identities=22% Similarity=0.348 Sum_probs=178.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|... ++..||+|+++... ...+++.+|+++++++ +||||
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 457888899999999999999852 46789999997543 2346789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 34699999999999999986541 248999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
+.++.+||+|||+++..... ++.++||||||+++|||+| |+.||......
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 266 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 266 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----
Confidence 99999999999998754321 5778999999999999999 99999753221
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcccccCCCc
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEENSPF 536 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~p~ 536 (538)
.+...+ ..+... .. ....+.++. +++.+||+.||++|||+.|+++.|+++.....-.+..+.+.|+
T Consensus 267 -~~~~~~----~~~~~~-----~~-~~~~~~~l~---~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~~~~~l 332 (334)
T 2pvf_A 267 -ELFKLL----KEGHRM-----DK-PANCTNELY---MMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQPL 332 (334)
T ss_dssp -HHHHHH----HHTCCC-----CC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-----------
T ss_pred -HHHHHH----hcCCCC-----CC-CccCCHHHH---HHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccCCCCcc
Confidence 111111 111100 01 111233444 4555999999999999999999999998877666655555554
No 59
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-37 Score=310.77 Aligned_cols=230 Identities=24% Similarity=0.324 Sum_probs=180.3
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC---------
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL--------- 337 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni--------- 337 (538)
+....++|...+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++||||
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999963 34789999997543 234678999999999999999
Q ss_pred --cccEEEeecCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSNG----------------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQ 393 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~ 393 (538)
..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 3469999999999999998642 1469999999999999999999999 999999
Q ss_pred CCCCCCeeeCCCCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCC
Q 040267 394 NISSSVILVDEDFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE 447 (538)
Q Consensus 394 Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~ 447 (538)
||||+||+++.++.+||+|||+++... ..++.++||||||+++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999986421 116789999999999999999 999997
Q ss_pred CCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 448 INASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..... .... ....+.... . ....+.++. +++.+||+.||++|||+.||++.|+++.+.+.
T Consensus 279 ~~~~~--------~~~~-~~~~~~~~~-----~-~~~~~~~l~---~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 279 GMAHE--------EVIY-YVRDGNILA-----C-PENCPLELY---NLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TSCHH--------HHHH-HHHTTCCCC-----C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCChH--------HHHH-HHhCCCcCC-----C-CCCCCHHHH---HHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 53321 1111 111221111 1 112233444 45559999999999999999999999887654
No 60
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.2e-37 Score=300.41 Aligned_cols=224 Identities=21% Similarity=0.344 Sum_probs=171.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv 342 (538)
.++|...+.||+|+||.||+|.... +..||+|.++... ...+.+.+|+.++++++|||| ..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv 93 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 93 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence 3467788999999999999998643 4579999987532 234678999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999998654 358999999999999999999999 9999999999999999999999999999875432
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||++ |+.||...... .+...+. .+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~----~~~~~---- 236 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIE----NGERL---- 236 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCCC----
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHH----cCCCC----
Confidence 16778999999999999997 99999864322 2222211 11110
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.. ....+.++.. ++.+||+.||++|||+.|+++.|+++.++.
T Consensus 237 -~~-~~~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 -PM-PPNCPPTLYS---LMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp -CC-CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CC-CCCCCHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01 1122334444 455999999999999999999999987653
No 61
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=297.27 Aligned_cols=229 Identities=21% Similarity=0.338 Sum_probs=176.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------ccEEEeecCCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------KPLVYKYMSNGT 350 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------~~lv~e~~~~gs 350 (538)
++|...+.||+|+||.||+|.. .++.||+|.+... ...+.+.+|++++++++||||+ .++||||+++|+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 4577788999999999999998 4788999999753 3356799999999999999993 369999999999
Q ss_pred HHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-eEEEeccCCcccCC-------
Q 040267 351 LYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-ARIMDFGFSRLTNG------- 421 (538)
Q Consensus 351 L~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~------- 421 (538)
|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++.....
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 9999987542 34789999999999999999999855578999999999999998886 79999999864322
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
.++.++||||||+++|||+||+.||...... ......... .+... .... ..+..
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~-~~~~~-----~~~~-~~~~~ 232 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAVH-NGTRP-----PLIK-NLPKP 232 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS------HHHHHHHHH-TTCCC-----CCBT-TCCHH
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc------HHHHHHHHh-cCCCC-----Cccc-ccCHH
Confidence 2788999999999999999999999753221 111111111 11111 1111 12234
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
+. +++.+||+.||++|||+.|+++.|+.+.+.+..
T Consensus 233 l~---~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 233 IE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HH---HHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HH---HHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 44 455599999999999999999999999876643
No 62
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-36 Score=302.19 Aligned_cols=238 Identities=21% Similarity=0.327 Sum_probs=175.0
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC--CCCCCc---------------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL--KHPNLE--------------- 338 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~H~ni~--------------- 338 (538)
....++|...+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++... +||||+
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 344568999999999999999999984 8999999986533 34455566665554 899992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-----HPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
.++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 36999999999999999775 4999999999999999999999810 129999999999999999999999999
Q ss_pred cCCcccCCC---------------------------CCC------ccCcccHHHHHHHHHhC----------CCCCCCCc
Q 040267 414 GFSRLTNGD---------------------------ASL------QKDVHGFGVVLLELVTG----------QKPFEINA 450 (538)
Q Consensus 414 g~a~~~~~~---------------------------~~~------~~DV~S~Gvvl~elltg----------~~p~~~~~ 450 (538)
|+++..... .+. ++|||||||++|||+|| +.||....
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 999643211 222 38999999999999999 56665432
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.... .... ................... .......+.+++.+||+.||++|||+.||++.|+++.++...
T Consensus 267 ~~~~---~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 335 (337)
T 3mdy_A 267 PSDP---SYED-MREIVCIKKLRPSFPNRWS---SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335 (337)
T ss_dssp CSSC---CHHH-HHHHHTTSCCCCCCCGGGG---GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTC
T ss_pred CCCC---chhh-hHHHHhhhccCccccccch---hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhccc
Confidence 2211 1111 1111111111111111111 123455566777799999999999999999999999987654
No 63
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=312.34 Aligned_cols=235 Identities=16% Similarity=0.193 Sum_probs=182.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC---------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc-----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD---------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK----------- 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~----------- 339 (538)
++|...+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||+.
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 568888999999999999999653 789999998753 46889999999999988732
Q ss_pred ----------------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 340 ----------------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 340 ----------------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
++||||+ +|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVD 193 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEc
Confidence 6999999 9999999987633469999999999999999999999 9999999999999999
Q ss_pred CCC--CeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 404 EDF--DARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 404 ~~~--~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
.++ .+||+|||+++.... .++.++||||||+++|||++|+.||.....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 899999999964321 167799999999999999999999985431
Q ss_pred cccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCccc
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFY 530 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 530 (538)
.. ..+......... ......+........+.++.++++ +||+.||++|||+.+|++.|+++.++.+.+.+.
T Consensus 274 ~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~ 344 (352)
T 2jii_A 274 NT---EDIMKQKQKFVD--KPGPFVGPCGHWIRPSETLQKYLK---VVMALTYEEKPPYAMLRNNLEALLQDLRVSPYD 344 (352)
T ss_dssp CH---HHHHHHHHHHHH--SCCCEECTTSCEECCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTS
T ss_pred CH---HHHHHHHHhccC--ChhhhhhhccccCCCcHHHHHHHH---HHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCc
Confidence 11 112222221111 112222222111123445555555 999999999999999999999999998876543
No 64
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.6e-36 Score=297.57 Aligned_cols=230 Identities=19% Similarity=0.274 Sum_probs=179.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ...+++.+|+.++.+++|||| ..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4688889999999999999995 468999999985422 223678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998765 59999999999999999999999 9999999999999999999999999999975432
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||+||+.||...... .......... .... ...
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~-~~~~-~~~ 235 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--------SIAIKHIQDS-VPNV-TTD 235 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--------HHHHHHHSSC-CCCH-HHH
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhhcc-CCCc-chh
Confidence 1678899999999999999999999853321 1111111111 1110 011
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHhHHhcCCCc
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKW-SMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~i~~~~~~~~ 528 (538)
... ..++.+. +++.+|++.||++|| +++++.+.|+++..+....+
T Consensus 236 ~~~-~~~~~l~---~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~ 281 (294)
T 4eqm_A 236 VRK-DIPQSLS---NVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE 281 (294)
T ss_dssp SCT-TSCHHHH---HHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred ccc-CCCHHHH---HHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence 111 1233444 455599999999998 99999999998776554443
No 65
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-36 Score=297.81 Aligned_cols=217 Identities=23% Similarity=0.341 Sum_probs=165.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .++.||||.++... ...+.+.+|+++++.++|||| ..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 4678889999999999999997 48899999986532 224678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---ccccCCCCCCeeeCC--------CCCeEEEe
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP---CLHQNISSSVILVDE--------DFDARIMD 412 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~---ivH~Dlkp~NIll~~--------~~~~kl~D 412 (538)
||+++|+|.+++... .+++..+..++.|++.||+|||+ .+ |+||||||+||+++. ++.+||+|
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp ECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999654 59999999999999999999999 66 999999999999986 67899999
Q ss_pred ccCCcccCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 413 FGFSRLTNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 413 fg~a~~~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
||+++..... ++.++||||||+++|||++|+.||....... ........ .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~-~ 230 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--------VAYGVAMN-K 230 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--------HHHHHHTS-C
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHhhhcC-C
Confidence 9999754321 6789999999999999999999998533211 11111111 1
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.. ... ....++.+. +++.+||+.||++|||+.|+++.|+++
T Consensus 231 ~~----~~~-~~~~~~~~~---~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 LA----LPI-PSTCPEPFA---KLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CC----CCC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CC----CCC-CcccCHHHH---HHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 10 001 112233444 455599999999999999999999864
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=300.16 Aligned_cols=238 Identities=19% Similarity=0.265 Sum_probs=180.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++|||| ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45778899999999999999964 58999999997533 345778899999999999999 225999
Q ss_pred eecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEeccCCcc
Q 040267 344 KYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDFGFSRL 418 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~ 418 (538)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999986542 349999999999999999999999 999999999999999 7888899999999975
Q ss_pred cCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 419 TNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 419 ~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
... .++.++|||||||++|||+||+.||............+...... ..
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~p 244 (319)
T 4euu_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG-KP 244 (319)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH-CC
T ss_pred cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC-CC
Confidence 321 25678999999999999999999997543322221112221111 11
Q ss_pred cCCccccc---------ccccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 469 SGRIKDVI---------DKALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 469 ~~~~~~~~---------d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
...+..+. ...+. ..........+.+++.+||+.||++|||++|+++..++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111100 00111 1223444455666777999999999999999999988654
No 67
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.3e-36 Score=303.69 Aligned_cols=226 Identities=21% Similarity=0.351 Sum_probs=178.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
.++|...+.||+|+||.||+|+. .+++.||+|.++... ...+.+.+|+++++++ +|||| .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35678889999999999999984 346799999997543 2346789999999999 89999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGN----------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
.++||||+++|+|.+++..... ..+++..+.+++.|++.||+|||+ .+|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence 4699999999999999987542 248999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
+.++.+||+|||+++..... ++.++||||||+++|||+| |+.||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence 99999999999998754321 6778999999999999999 999997543211
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.....+. .+. . .. .....+.++..+ +.+||+.||.+|||+.|+++.|+++.++.
T Consensus 256 -~~~~~~~----~~~-~----~~-~~~~~~~~l~~l---i~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 -KFYKMIK----EGF-R----ML-SPEHAPAEMYDI---MKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp -HHHHHHH----HTC-C----CC-CCTTSCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHhc----cCC-C----CC-CcccCCHHHHHH---HHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1111111 110 0 00 111223444444 45999999999999999999999988764
No 68
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9.6e-37 Score=299.70 Aligned_cols=222 Identities=22% Similarity=0.362 Sum_probs=174.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++|||| ..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 35678889999999999999987 58899999997543 45779999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999986543348899999999999999999999 9999999999999999999999999999875432
Q ss_pred ---------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|||+| |+.||...... .+...+ ..+. .... ....
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~----~~~~-----~~~~-~~~~ 239 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRV----EKGY-----KMDA-PDGC 239 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHH----TTTC-----CCCC-CTTC
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----hcCC-----CCCC-cccC
Confidence 16789999999999999998 99999754321 111111 1110 0111 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+..+..++ .+||+.||++|||+.|+++.|+++...
T Consensus 240 ~~~l~~li---~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 240 PPAVYEVM---KNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHH---HHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 33444444 499999999999999999999998764
No 69
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-36 Score=303.44 Aligned_cols=219 Identities=15% Similarity=0.237 Sum_probs=173.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|... +++.||+|.++........+.+|+++++.++|||| ..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 457888899999999999999954 58899999998655556678999999999999999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC--CCCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE--DFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 84 ~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999997653 369999999999999999999999 99999999999999997 789999999999865331
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++|||||||++|||++|+.||...... ........ +... .+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~-~~~~--~~~~~~- 227 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMN-AEYT--FDEEAF- 227 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-TCCC--CCHHHH-
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHc-CCCC--CChhhh-
Confidence 578999999999999999999999753321 11111111 1100 000000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.++.++++ +|++.||++|||+.|+++.
T Consensus 228 ~~~s~~~~~li~---~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 KEISIEAMDFVD---RLLVKERKSRMTASEALQH 258 (321)
T ss_dssp TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhcC
Confidence 112334444444 9999999999999999973
No 70
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.4e-36 Score=296.56 Aligned_cols=232 Identities=15% Similarity=0.198 Sum_probs=178.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|++++.++ +|+|+ ..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 4688889999999999999994 578999999986432 234688999999999 78888 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-----eEEEeccCCcccCC
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-----ARIMDFGFSRLTNG 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~ 421 (538)
+++|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++....
T Consensus 89 -~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 89 -GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred -CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 999999998754 259999999999999999999999 99999999999999987766 99999999874321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++||||||+++|||++|+.||........ ......+........
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEKKQSTP 241 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHHHHHSC
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHhhccCcc
Confidence 157889999999999999999999986432111 011111111100000
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
.. .+. ...++++. +++.+||+.||++|||+.+|++.|+++.++.+..+
T Consensus 242 ~~-----~~~-~~~~~~l~---~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~ 289 (298)
T 1csn_A 242 LR-----ELC-AGFPEEFY---KYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTE 289 (298)
T ss_dssp HH-----HHT-TTSCHHHH---HHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred HH-----HHH-hhCcHHHH---HHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence 00 000 11233444 45559999999999999999999999999887664
No 71
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.2e-37 Score=307.89 Aligned_cols=231 Identities=19% Similarity=0.231 Sum_probs=176.4
Q ss_pred CCCCCeEeecCCceEEEEEeC-----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-------------ccE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-------------KPL 341 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-------------~~l 341 (538)
|...+.||+|+||.||++.+. +++.||||+++... ...+.+.+|++++++++||||. .++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 367789999999999998642 57899999997643 2346689999999999999992 269
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++.... +++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999998754 8999999999999999999999 9999999999999999999999999999976532
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccc----ccc--cHHHHHHHHhcc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEG----YKG--NLVNWIDQLSSS 469 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~----~~~--~~~~~~~~~~~~ 469 (538)
. ++.++||||||+++|||+||+.||........ ... .....+......
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 1 45688999999999999999999975321100 000 000011111111
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
+.. .. .....+.+ +.+++.+||+.||++|||+.|+++.|+++.+++...
T Consensus 267 ~~~-----~~-~~~~~~~~---l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 267 GER-----LP-RPDKCPAE---VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp TCC-----CC-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccC-----CC-CCccccHH---HHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 110 00 01122334 445555999999999999999999999998877543
No 72
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.1e-36 Score=296.38 Aligned_cols=225 Identities=24% Similarity=0.400 Sum_probs=170.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|+..+ .||+|.++.... ..+.+.+|++++++++|||| ..++||||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 100 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 100 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence 4568888999999999999998643 599999975432 23668999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 101 CEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred cCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999997654 369999999999999999999999 9999999999999999999999999999864321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||++|+.||......+ .+... ...+.......
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~----~~~~~~~~~~~ 248 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEM----VGRGSLSPDLS 248 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHH----HHHTSCCCCTT
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHH----hcccccCcchh
Confidence 15668999999999999999999997533211 11111 11111111111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. +. ...++++. +++.+||+.||++|||+.|+++.|+++.+
T Consensus 249 ~-~~-~~~~~~l~---~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 K-VR-SNCPKRMK---RLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp S-SC-TTSCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h-cc-ccCCHHHH---HHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1 11 11233444 45559999999999999999999998864
No 73
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-35 Score=295.03 Aligned_cols=226 Identities=24% Similarity=0.330 Sum_probs=174.4
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCC---EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEEE
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGS---MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLVY 343 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~---~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv~ 343 (538)
|...++||+|+||.||+|.. .++. .||+|.+.... ...+.+.+|++++++++|||| ..++|+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 44558899999999999984 3333 79999997533 234678999999999999999 236999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+.+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 103 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred ecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999998744 368999999999999999999999 9999999999999999999999999999974321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||++|..|+...... ..+...+.. +...
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~----~~~~--- 247 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQ----GRRL--- 247 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHT----TCCC---
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhc----CCCC---
Confidence 1578899999999999999966555432211 122222211 1100
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
......++.+.+ ++.+||+.||.+|||+.|+++.|+++.+++....
T Consensus 248 ---~~~~~~~~~l~~---li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 248 ---PQPEYCPDSLYQ---VMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ---CCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ---CCCccchHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 011122334444 4459999999999999999999999998875543
No 74
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=314.73 Aligned_cols=224 Identities=21% Similarity=0.320 Sum_probs=174.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|... ++..||||+++... ....++.+|+.++++++|||| ..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46788899999999999999943 36689999997532 334568899999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEEe
Q 040267 341 LVYKYMSNGTLYSLLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIMD 412 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 412 (538)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999998643 2458999999999999999999999 9999999999999999554 599999
Q ss_pred ccCCccc-------------------------CCCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHH
Q 040267 413 FGFSRLT-------------------------NGDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 413 fg~a~~~-------------------------~~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
||+++.. ...++.++|||||||++|||+| |+.||...... .+.. ..
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~---~i 299 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLE---FV 299 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH---HH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HH
Confidence 9998632 0127889999999999999998 99999753321 1111 11
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. .+.... . ....+.. +.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 300 ~-~~~~~~-----~-~~~~~~~---l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 300 T-SGGRMD-----P-PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp H-TTCCCC-----C-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred H-cCCCCC-----C-CccCCHH---HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 1 111000 0 1112334 445555999999999999999999999987653
No 75
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=304.76 Aligned_cols=221 Identities=23% Similarity=0.365 Sum_probs=172.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCC----EEEEEEcccc--cccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGS----MLAIKRLSAC--KLGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|.. .+++ .||+|.+... ....+++.+|+.++++++||||+ .++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v 94 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence 5688889999999999999995 3454 3578877542 34567899999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp ECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999998754 269999999999999999999999 9999999999999999999999999999975422
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||++ |+.||...... .+...+. .+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~----~~~~~~-- 239 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILE----KGERLP-- 239 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCCCC--
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHH----cCCCCC--
Confidence 16789999999999999999 99999864332 1222111 111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.....+.++. +++.+||+.||.+|||+.|+++.|+++.+
T Consensus 240 ----~~~~~~~~l~---~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 240 ----QPPICTIDVY---MIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----CCTTBCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ----CCccCCHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0112233444 45559999999999999999999999874
No 76
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.2e-36 Score=295.98 Aligned_cols=225 Identities=24% Similarity=0.363 Sum_probs=174.5
Q ss_pred CCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv 342 (538)
.|...+.||+|+||.||+|...+ ...||+|.+.... ...+++.+|+.++++++|||| ..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 46777899999999999999543 2368999987533 234678999999999999999 33699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 106 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999997644 368999999999999999999999 9999999999999999999999999999974421
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++||||||+++|||++ |..||...... ....... .+..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-----~~~~~~~----~~~~-- 250 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL----QGRR-- 250 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-----THHHHHH----TTCC--
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHHh----cCCC--
Confidence 16788999999999999999 55566543221 1211111 1110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.......++.+. +++.+||+.||++|||+.|+++.|+++..++...
T Consensus 251 ----~~~~~~~~~~l~---~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 251 ----LLQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp ----CCCCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred ----CCCCccCCHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 011122233444 4555999999999999999999999998876543
No 77
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7e-37 Score=307.88 Aligned_cols=221 Identities=21% Similarity=0.320 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCE----EEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSM----LAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|... +++. ||+|.+.... ...+++.+|+.++++++||||+ .++|
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v 92 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV 92 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence 46777899999999999999953 4543 8888875432 2335678899999999999993 3599
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999998653 268999999999999999999999 9999999999999999999999999999985432
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||+| |+.||...... .+...+. .+....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~----~~~~~~-- 237 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-----EVPDLLE----KGERLA-- 237 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-----HHHHHHH----TTCBCC--
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-----HHHHHHH----cCCCCC--
Confidence 16779999999999999999 99999864321 1222211 111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. ....+.+ +.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 238 ~----~~~~~~~---~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 238 Q----PQICTID---VYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp C----CTTBCTT---TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred C----CCcCcHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0111223 3445559999999999999999999999864
No 78
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8e-36 Score=295.41 Aligned_cols=235 Identities=17% Similarity=0.212 Sum_probs=177.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEe
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYK 344 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e 344 (538)
..++|...+.||+|+||.||+|.. .+++.||||.+..... .+++.+|+++++.++|+++ ..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 456799999999999999999995 5789999998754322 2458899999999998876 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+ +|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99 899999998544 259999999999999999999999 999999999999999 7889999999999974321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++|||||||++|||++|+.||......... ..+.......... .
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~-~ 238 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST-P 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS-C
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccccc-h
Confidence 1567899999999999999999999864332211 1111111111100 0
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
. +.+. ...++++. +++.+||+.||++|||+.+|++.|+++.++.+.+.+
T Consensus 239 ~-----~~~~-~~~~~~l~---~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 4hgt_A 239 I-----EVLC-KGYPSEFA---TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp H-----HHHT-TTSCHHHH---HHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTT
T ss_pred h-----hhhh-ccCCHHHH---HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcc
Confidence 0 0000 11233444 455599999999999999999999999998887653
No 79
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-36 Score=303.53 Aligned_cols=224 Identities=23% Similarity=0.347 Sum_probs=172.3
Q ss_pred CCCCCCeEeecCCceEEEEEeCC-----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD-----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...+.||+|+||.||+|.... +..||||.++... .....+.+|++++++++|||| ..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667899999999999998532 2369999997543 234568999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 125 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999998653 369999999999999999999999 9999999999999999999999999999875421
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||++ |+.||...... .+ .... ..+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~---~~~~-~~~~~~-- 269 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EV---MKAI-NDGFRL-- 269 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HH---HHHH-HTTCCC--
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HH---HHHH-HCCCcC--
Confidence 16778999999999999999 99999753221 11 1111 111100
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.. ....+..+ .+++.+||+.||++||++.|+++.|+++.+....
T Consensus 270 ---~~-~~~~~~~l---~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 270 ---PT-PMDCPSAI---YQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp ---CC-CTTCBHHH---HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ---CC-cccCCHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 00 11123344 4455599999999999999999999998775543
No 80
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.6e-36 Score=304.32 Aligned_cols=232 Identities=13% Similarity=0.164 Sum_probs=179.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||||.+.... ..+++.+|+++++++ +|||| ..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 5688889999999999999994 578999999986533 234688999999999 89999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-----eEEEeccCCcccCC
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-----ARIMDFGFSRLTNG 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~ 421 (538)
+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++....
T Consensus 88 -~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 88 -GPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred -CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 899999998753 369999999999999999999999 99999999999999998877 99999999975321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++|||||||++|||++|+.||...... .+.......... .
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~-~ 236 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD-----TLKERYQKIGDT-K 236 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS-----SHHHHHHHHHHH-H
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc-----cHHHHHHHHHhh-h
Confidence 1577899999999999999999999864321 111111111100 0
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
... ....+ ....+ + +.+++..||+.||.+||++.+|.+.|+++.++.+...+
T Consensus 237 ~~~-~~~~~-~~~~p-~---~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 288 (330)
T 2izr_A 237 RAT-PIEVL-CENFP-E---MATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFD 288 (330)
T ss_dssp HHS-CHHHH-TTTCH-H---HHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred ccC-CHHHH-hccCh-H---HHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 000 00001 11122 4 44455599999999999999999999999988876543
No 81
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=326.97 Aligned_cols=220 Identities=18% Similarity=0.261 Sum_probs=176.4
Q ss_pred eEeecCCceEEEEEeC---CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecCCCCH
Q 040267 287 VLVSTWTGTTYKAMLL---DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMSNGTL 351 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~~gsL 351 (538)
.||+|+||.||+|... ++..||||.++... ...+++.+|++++++++||||+ .++||||+++|+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L 422 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence 7999999999999853 45689999997532 3467899999999999999993 3599999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 423 ~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 423 HKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99997653 369999999999999999999999 9999999999999999999999999999986421
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++|||||||++|||+| |+.||...... .+... +..+.... . ...
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~----i~~~~~~~-----~-p~~ 563 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAF----IEQGKRME-----C-PPE 563 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-----HHHHH----HHTTCCCC-----C-CTT
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHH----HHcCCCCC-----C-CCc
Confidence 16789999999999999998 99999864321 12221 11111110 0 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
.+.+ +.+++.+||+.||++|||+.+|++.|+.+..+.....
T Consensus 564 ~~~~---l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~ 604 (613)
T 2ozo_A 564 CPPE---LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 604 (613)
T ss_dssp CCHH---HHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSC
T ss_pred CCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcccc
Confidence 2334 4455559999999999999999999999988775543
No 82
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-36 Score=306.88 Aligned_cols=227 Identities=22% Similarity=0.313 Sum_probs=175.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
..++|...+.||+|+||.||+|.. .++..||+|.++... ...+.+.+|+.++.++ +||||
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456788899999999999999995 235689999997532 3346799999999999 89999
Q ss_pred cccEEEeecCCCCHHHHhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGN---------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 396 (538)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 34699999999999999986542 238999999999999999999999 999999999
Q ss_pred CCCeeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCc
Q 040267 397 SSVILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINA 450 (538)
Q Consensus 397 p~NIll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~ 450 (538)
|+||+++.++.+||+|||++..... .++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999974321 16789999999999999998 999997643
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
... .+... ...+.. ... ....++++.. ++.+||+.||++|||+.|+++.|+.+....
T Consensus 280 ~~~----~~~~~----~~~~~~-----~~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VDA----NFYKL----IQNGFK-----MDQ-PFYATEEIYI---IMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CSH----HHHHH----HHTTCC-----CCC-CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cHH----HHHHH----HhcCCC-----CCC-CCCCCHHHHH---HHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 211 11111 111110 000 1122344444 445999999999999999999999886654
No 83
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.5e-36 Score=298.96 Aligned_cols=230 Identities=20% Similarity=0.328 Sum_probs=174.2
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc--------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
++....++|...+.||+|+||.||+|... ++..||+|.++.... ..+.+.+|+.++++++||||.
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33344567888899999999999999843 245899999975432 235688999999999999992
Q ss_pred --------ccEEEeecCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC
Q 040267 339 --------KPLVYKYMSNGTLYSLLHSN----GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF 406 (538)
Q Consensus 339 --------~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 406 (538)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC
Confidence 27899999999999999542 23469999999999999999999999 9999999999999999999
Q ss_pred CeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHH
Q 040267 407 DARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 407 ~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 460 (538)
.+||+|||+++.... .++.++||||||+++|||++ |+.||...... .+.
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~ 259 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMY 259 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHH
Confidence 999999999975421 16778999999999999999 88999754322 121
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+ . .+... ... ...+++ +.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 260 ~~~---~-~~~~~-----~~~-~~~~~~---l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 260 DYL---L-HGHRL-----KQP-EDCLDE---LYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HHH---H-TTCCC-----CCB-TTCCHH---HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHH---H-cCCCC-----CCC-ccccHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 1 11100 011 112234 445555999999999999999999999998765
No 84
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.3e-35 Score=294.94 Aligned_cols=224 Identities=20% Similarity=0.293 Sum_probs=169.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||+||+|+..+|+.||+|+++.... ..+.+.+|++++++++|||| ..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 356888899999999999999988899999999975332 23678899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9985 8888887654 359999999999999999999999 9999999999999999999999999999975431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC---Ccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG---RIKDVID 477 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 477 (538)
.++.++|||||||++|||++|+.||......+ ....+....... .+....+
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-----QLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-----HHHHHHHHHCCCCTTTSGGGTT
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHHCCCChHHhhhhhc
Confidence 16788999999999999999999998644322 111111111110 0000000
Q ss_pred ---------ccccC-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 ---------KALTG-------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 ---------~~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ...+.+ +.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQE---GIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHH---HHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhhhcccccccCCcHHHhCcccCHH---HHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000 011233 445555999999999999999986
No 85
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.3e-37 Score=307.56 Aligned_cols=231 Identities=19% Similarity=0.311 Sum_probs=162.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhc--CCCCCCc---------------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGL--LKHPNLE---------------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~ni~---------------~~lv 342 (538)
++|...+.||+|+||.||+|+. +++.||||+++.. ....+.+|.+++.. ++||||. .++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 5788999999999999999987 5899999998753 34667788888887 7899992 3699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH--------HCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
|||+++|+|.+++... .+++..+.+++.|++.||+||| + .+|+||||||+|||++.++.+||+|||
T Consensus 80 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeecC
Confidence 9999999999999765 4889999999999999999999 7 999999999999999999999999999
Q ss_pred CCcccCCC---------------------------------CCCccCcccHHHHHHHHHhC----------CCCCCCCcc
Q 040267 415 FSRLTNGD---------------------------------ASLQKDVHGFGVVLLELVTG----------QKPFEINAS 451 (538)
Q Consensus 415 ~a~~~~~~---------------------------------~~~~~DV~S~Gvvl~elltg----------~~p~~~~~~ 451 (538)
+++..... ++.++|||||||++|||+|| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 98643211 11478999999999999999 666654322
Q ss_pred cccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.......+... ............... ..+....+.+++.+||+.||++|||+.||++.|+++.++.+.
T Consensus 234 ~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~~ 301 (303)
T 3gxj_A 234 SDPSVEEMRKV----VCEQKLRPNIPNRWQ---SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp -CCCCC-CHHH----HTTSCCCCCCCGGGG---SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC---
T ss_pred CCccHHHHHHH----HHHhhcCCCcccccc---chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhccc
Confidence 21111111111 111111111111111 124455667777799999999999999999999998876543
No 86
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.7e-36 Score=295.97 Aligned_cols=223 Identities=18% Similarity=0.317 Sum_probs=175.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv 342 (538)
.++|...+.||+|+||.||+|...+ +..||+|.++... ...+++.+|++++++++|||| ..++|
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v 90 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence 4568888999999999999998532 3369999997542 235679999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 91 MELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999997644 358999999999999999999999 9999999999999999999999999999875432
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||+| |+.||...... .....+.. +....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~----~~~~~--- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEK----GDRLP--- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHH----TCCCC---
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhc----CCCCC---
Confidence 16778999999999999998 99999753322 12221111 11000
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.....++.+.. ++.+||+.||++|||+.|+++.|+++.+.
T Consensus 235 ---~~~~~~~~l~~---li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 ---KPDLCPPVLYT---LMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ---CCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHH---HHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 01112334444 45599999999999999999999998653
No 87
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.3e-35 Score=298.55 Aligned_cols=236 Identities=19% Similarity=0.311 Sum_probs=181.8
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhc--CCCCCC---------------
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGL--LKHPNL--------------- 337 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~ni--------------- 337 (538)
-....++|...+.||+|+||.||+|+. +++.||||.+... ....+.+|++++.. ++||||
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 344556899999999999999999998 6899999999653 34667888888887 789999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH--------HCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
..++||||+++|+|.+++... .+++.+++.++.|++.||+||| + .+|+||||||+||+++.++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEE
Confidence 236999999999999999875 4999999999999999999999 6 8999999999999999999999
Q ss_pred EEeccCCcccCCC---------------------------------CCCccCcccHHHHHHHHHhC----------CCCC
Q 040267 410 IMDFGFSRLTNGD---------------------------------ASLQKDVHGFGVVLLELVTG----------QKPF 446 (538)
Q Consensus 410 l~Dfg~a~~~~~~---------------------------------~~~~~DV~S~Gvvl~elltg----------~~p~ 446 (538)
|+|||+++..... ++.++||||||+++|||+|| +.||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 9999998643211 11579999999999999999 7788
Q ss_pred CCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 447 EINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
......+. ....+..... .......+.... ...+....+.+++.+||+.||++|||+.||++.|+++.++.+.
T Consensus 268 ~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~~ 340 (342)
T 1b6c_B 268 YDLVPSDP---SVEEMRKVVC-EQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340 (342)
T ss_dssp TTTSCSSC---CHHHHHHHHT-TSCCCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC-
T ss_pred cccCcCcc---cHHHHHHHHH-HHHhCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhcC
Confidence 65332211 2222222221 111111111111 1123455666777799999999999999999999999987664
No 88
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.3e-35 Score=292.25 Aligned_cols=234 Identities=18% Similarity=0.212 Sum_probs=180.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|+.+++.++|+++ ..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 45788889999999999999995 6799999999865332 3568899999999998876 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~- 421 (538)
+ +++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred c-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 9 899999998543 269999999999999999999999 9999999999999994 889999999999874321
Q ss_pred -----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 422 -----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 422 -----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.++.++||||||+++|||++|+.||......... ..+.......... ..
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~-~~ 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST-PI 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS-CH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-hhhhhhcccccCC-ch
Confidence 1567899999999999999999999864332111 1111111111110 00
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
+.+. ...++++. +++.+||+.||++|||+.+|++.|+++.++.+.+.+
T Consensus 240 -----~~~~-~~~~~~l~---~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 3uzp_A 240 -----EVLC-KGYPSEFA---TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp -----HHHT-TTSCHHHH---HHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSS
T ss_pred -----HHHH-hhCCHHHH---HHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccc
Confidence 0010 11233444 455599999999999999999999999998877643
No 89
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.4e-35 Score=300.59 Aligned_cols=217 Identities=17% Similarity=0.265 Sum_probs=171.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc-------cHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.+.|...+.||+|+||.||+|... +|+.||+|.++.... ..+.+.+|+.++++++|||| ..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888899999999999999954 689999999965321 34779999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGF 415 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 415 (538)
++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+||++++++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 69999999999999997655 69999999999999999999999 9999999999999998776 799999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
++.... .++.++|||||||++|||++|+.||......+ ...... .+...
T Consensus 166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--------~~~~i~-~~~~~ 236 (361)
T 2yab_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANIT-AVSYD 236 (361)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHH-TTCCC
T ss_pred ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHH-hcCCC
Confidence 975432 17789999999999999999999997643211 111111 11100
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.++... ...++++.++++ +||+.||++|||+.|+++
T Consensus 237 --~~~~~~-~~~s~~~~~li~---~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 --FDEEFF-SQTSELAKDFIR---KLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --CCHHHH-TTSCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred --CCchhc-cCCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 011100 112344555555 999999999999999985
No 90
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-35 Score=293.41 Aligned_cols=227 Identities=18% Similarity=0.216 Sum_probs=170.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CC-------CEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DG-------SMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~-------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
++|...+.||+|+||.||+|... ++ ..||+|.+.... ...+.+.+|++++++++|||| ..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 46778899999999999999853 33 479999997543 445779999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--------eEEE
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--------ARIM 411 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~ 411 (538)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeec
Confidence 69999999999999998754 248999999999999999999999 99999999999999998877 9999
Q ss_pred eccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 412 DFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 412 Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
|||++..... .++.++||||||+++|||++|..|+...... ............
T Consensus 164 Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~~~~~~~~~~~ 236 (289)
T 4fvq_A 164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------QRKLQFYEDRHQ 236 (289)
T ss_dssp CCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHTTCC
T ss_pred cCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------HHHHHHhhccCC
Confidence 9999975432 2788999999999999999965544322111 111111111111
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
.. ...+.++. +++.+||+.||++|||+.|+++.|+++....+.+..
T Consensus 237 ~~---------~~~~~~l~---~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 237 LP---------APKAAELA---NLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp CC---------CCSSCTTH---HHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred CC---------CCCCHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 11 11122334 455599999999999999999999998876655543
No 91
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-36 Score=297.27 Aligned_cols=225 Identities=19% Similarity=0.274 Sum_probs=177.1
Q ss_pred CCCCCC-eEeecCCceEEEEEeC---CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEEEe
Q 040267 281 NFSAQN-VLVSTWTGTTYKAMLL---DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLVYK 344 (538)
Q Consensus 281 ~f~~~~-~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e 344 (538)
+|...+ .||+|+||.||+|... ++..||+|.++... ...+++.+|++++++++||||. .++|||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 89 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME 89 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEE
Confidence 344444 8999999999999853 57789999997643 3356789999999999999993 469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 90 MAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp CCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred eCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999997543 369999999999999999999999 99999999999999999999999999998754311
Q ss_pred ------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
++.++||||||+++|||+| |+.||...... .+...+ ..+...
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i----~~~~~~---- 232 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFI----EQGKRM---- 232 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHH----HTTCCC----
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHH----hcCCcC----
Confidence 5678999999999999999 99999753321 111111 111111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.. ....+.++.. ++.+||+.||++|||+.|+++.|+++..+.+..
T Consensus 233 -~~-~~~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 233 -EC-PPECPPELYA---LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp -CC-CTTCCHHHHH---HHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred -CC-CCCcCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 11 1122334444 445999999999999999999999998776444
No 92
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.6e-35 Score=297.63 Aligned_cols=213 Identities=21% Similarity=0.275 Sum_probs=172.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.+++. ....+.+.+|+++++.++|||| ..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888899999999999999954 6999999999753 2345678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999998755 58999999999999999999999 9999999999999999999999999999875321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||...... ........ +.. .+
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~-~~~------~~ 224 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILM-EEI------RF 224 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC------CC
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--------HHHHHHHc-CCC------CC
Confidence 1688999999999999999999999753321 11111111 111 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
....+.++..+++ +||+.||++|| ++.||++.
T Consensus 225 -p~~~s~~~~~li~---~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 -PRTLSPEAKSLLA---GLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCCCHHHHHHHH---HHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1123445566665 99999999999 89998763
No 93
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-36 Score=304.17 Aligned_cols=216 Identities=19% Similarity=0.282 Sum_probs=168.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
++|...+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.+++.++||||+ .++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57888899999999999999954 78999999986433 2235688999999999999993 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 87 CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999998665 59999999999999999999999 9999999999999999999999999999974320
Q ss_pred ---------------------C-CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ---------------------D-ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ---------------------~-~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .+.++|||||||++|||++|+.||....... .....|.. .... ..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~----~~~~---~~~- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKE----KKTY---LNP- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHT----TCTT---STT-
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhc----cccc---CCc-
Confidence 0 3668999999999999999999997543211 11111111 1000 000
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++.+ ++.+||+.||++|||+.|+++.
T Consensus 231 --~~~~~~~~~~---li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 --WKKIDSAPLA---LLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --GGGSCHHHHH---HHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccCCHHHHH---HHHHHccCChhhCcCHHHHhhC
Confidence 0112234444 5559999999999999999764
No 94
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.3e-36 Score=301.17 Aligned_cols=235 Identities=20% Similarity=0.273 Sum_probs=183.0
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC----
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL---- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni---- 337 (538)
...+.....++|...+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++.++ +||||
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344445567899999999999999999983 3467999999975432 345789999999999 79999
Q ss_pred --------cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCC
Q 040267 338 --------EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395 (538)
Q Consensus 338 --------~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl 395 (538)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccC
Confidence 25699999999999999987542 128899999999999999999999 99999999
Q ss_pred CCCCeeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCC
Q 040267 396 SSSVILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEIN 449 (538)
Q Consensus 396 kp~NIll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~ 449 (538)
||+||+++.++.+||+|||+++.... .++.++||||||+++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999975422 16789999999999999998 99999753
Q ss_pred cccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 450 ASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
...+ .+... ...+... .. ....+.++ .+++.+||+.||.+|||+.||++.|+++.+...
T Consensus 255 ~~~~----~~~~~----~~~~~~~-----~~-~~~~~~~l---~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 255 KIDE----EFCRR----LKEGTRM-----RA-PDYTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCSH----HHHHH----HHHTCCC-----CC-CTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred chhH----HHHHH----hccCccC-----CC-CCCCCHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 3211 11111 1111100 01 11123344 445559999999999999999999999987654
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.9e-35 Score=290.85 Aligned_cols=223 Identities=21% Similarity=0.314 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++|||| ..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4678889999999999999998789999999996533 224678899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 985 9999987653 258999999999999999999999 999999999999999999999999999886422
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCccc----
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKD---- 474 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---- 474 (538)
..++.++|||||||++|||++|+.||......+ .+.... ..... ..+..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD----QLMRIF-RILGTPNSKNWPNVTEL 231 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHH-HHHCCCCTTTSTTGGGS
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHH-HHHCCCChhhchhhhcc
Confidence 116889999999999999999999998643211 111111 11110 00000
Q ss_pred -ccccccc----------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 -VIDKALT----------GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 -~~d~~l~----------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++... ....++++.+++ .+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li---~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLL---SKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHH---HHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccCccHHHHhhhcCHHHHHHH---HHHcCCCcccCCCHHHHhc
Confidence 0011000 011234444444 4999999999999999875
No 96
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.1e-36 Score=299.37 Aligned_cols=223 Identities=21% Similarity=0.272 Sum_probs=174.9
Q ss_pred hcCCCCCC-eEeecCCceEEEEEe---CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 279 TSNFSAQN-VLVSTWTGTTYKAML---LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~-~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
.++|...+ .||+|+||.||+|.. .+++.||||.++... ...+++.+|+++++.++|||| ..++
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l 94 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML 94 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence 34566666 899999999999963 346789999997543 224679999999999999999 3369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 95 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999998765 59999999999999999999999 9999999999999999999999999999875432
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. ++.++||||||+++|||+| |+.||...... .+.. ....+...
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~----~~~~~~~~- 239 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTA----MLEKGERM- 239 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH----HHHTTCCC-
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH----HHHcCCCC-
Confidence 1 4568999999999999999 99999853321 1111 11111111
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.. ....+..+.. ++.+||+.||++|||+.||++.|+++....
T Consensus 240 ----~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 240 ----GC-PAGCPREMYD---LMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp ----CC-CTTCCHHHHH---HHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ----CC-CCCCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11 1122334444 455999999999999999999999987654
No 97
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=300.25 Aligned_cols=211 Identities=18% Similarity=0.281 Sum_probs=169.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+++++.++||||+ .++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788889999999999999995 578999999986422 2346789999999999999993 36999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+ +|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 999 689999987655 59999999999999999999999 99999999999999999999999999999754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc-
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA- 479 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 479 (538)
.+.++|||||||++|||++|+.||......+.. ..+....
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------------~~i~~~~~ 225 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------------KKVNSCVY 225 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------------CCCCSSCC
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------------HHHHcCCC
Confidence 267899999999999999999999864322111 0000000
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
......+.++.++++ +||+.||.+|||+.|+++.
T Consensus 226 ~~p~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIR---RMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCTTSCHHHHHHHH---TTSCSSGGGSCCHHHHTTC
T ss_pred CCcccCCHHHHHHHH---HHcCCChhHCcCHHHHHhC
Confidence 011223445555555 9999999999999999863
No 98
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=300.13 Aligned_cols=232 Identities=22% Similarity=0.308 Sum_probs=177.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++||||. .+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577789999999999999984 358899999997543 3346799999999999999992 36
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999998754 359999999999999999999999 999999999999999999999999999997543
Q ss_pred CC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccc-------cccccHHHHHHHHh
Q 040267 421 GD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEE-------GYKGNLVNWIDQLS 467 (538)
Q Consensus 421 ~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 467 (538)
.. ++.++||||||+++|||+||..|+....... .........+....
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 21 4668999999999999999999986421100 00000111111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+... .. ....+.++ .+++.+||+.||++|||+.||++.|+++.+++
T Consensus 277 ~~~~~~-----~~-~~~~~~~l---~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 277 KNNGRL-----PR-PDGCPDEI---YMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HTTCCC-----CC-CTTCCHHH---HHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hcCCCC-----CC-CCcccHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111100 00 11223344 44555999999999999999999999998764
No 99
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-35 Score=304.18 Aligned_cols=217 Identities=17% Similarity=0.252 Sum_probs=166.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcC-CCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLL-KHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~H~ni-----------~~~l 341 (538)
.++|...++||+|+||.||+|+.. +++.||+|++++... ..+.+.+|..++.++ +|||| ..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457888999999999999999964 588999999975432 224578899999887 89999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999998765 59999999999999999999999 9999999999999999999999999999975211
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||......+........++.........
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 167899999999999999999999975433222111112222222221111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
.+ ....+.++.++++ +||+.||++||++
T Consensus 280 ~~-p~~~s~~~~~li~---~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 RI-PRSLSVKAASVLK---SFLNKDPKERLGC 307 (396)
T ss_dssp CC-CTTSCHHHHHHHH---HHTCSCTTTSTTC
T ss_pred CC-CCcCCHHHHHHHH---HHhcCCHhHcCCC
Confidence 01 1123345555555 9999999999996
No 100
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=296.39 Aligned_cols=216 Identities=17% Similarity=0.274 Sum_probs=170.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
+.|...+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|+.++++++|||| ..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45788899999999999999964 68999999986432 135779999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 91 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999997654 69999999999999999999999 9999999999999999887 8999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+.... .++.++|||||||++|||++|+.||......+ ....... ... .
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~~~~-~~~-~ 235 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANVSA-VNY-E 235 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHH-TCC-C
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHh-cCC-C
Confidence 76431 16789999999999999999999997533211 1111111 000 0
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ..... ...+.++.++++ +||+.||++|||+.|+++
T Consensus 236 ~-~~~~~-~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 F-EDEYF-SNTSALAKDFIR---RLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C-CHHHH-TTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred c-Ccccc-ccCCHHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 0 00000 112334444444 999999999999999987
No 101
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.6e-36 Score=295.97 Aligned_cols=228 Identities=19% Similarity=0.269 Sum_probs=172.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
.|...+.||+|+||.||+|++ .+++.||+|.++... ...+.+.+|++++++++||||. .+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 467778999999999999983 358899999997532 3457799999999999999992 36
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 102 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999996543 259999999999999999999999 999999999999999999999999999997543
Q ss_pred CC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccc------cccccHHHHHHHHhc
Q 040267 421 GD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEE------GYKGNLVNWIDQLSS 468 (538)
Q Consensus 421 ~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~------~~~~~~~~~~~~~~~ 468 (538)
.. ++.++||||||+++|||+||+.|+....... .........+.....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 21 4568999999999999999999875321100 000001111111111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.+... .. ....++++. +++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ~~~~~-----~~-~~~~~~~l~---~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKRL-----PC-PPNCPDEVY---QLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCCC-----CC-CTTCCHHHH---HHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCC-----CC-CCCCCHHHH---HHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11100 00 112233444 4555999999999999999999999875
No 102
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=301.73 Aligned_cols=214 Identities=18% Similarity=0.270 Sum_probs=170.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|...+.||+|+||.||+|+.. +++.||||++++. ....+.+.+|.+++..+ +|||| ..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999954 6899999999753 23346688999999988 69999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 101 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999998765 59999999999999999999999 999999999999999999999999999998532
Q ss_pred CC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 GD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.. ++.++|||||||++|||++|+.||...... +....... +..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~~----- 241 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILN-DEV----- 241 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC-----
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHc-CCC-----
Confidence 11 788999999999999999999999864322 11111111 111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSM------YQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~ 515 (538)
.. ....+..+..+++ +|++.||++||++ .|+++
T Consensus 242 -~~-p~~~~~~~~~li~---~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 -VY-PTWLHEDATGILK---SFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -CC-CTTSCHHHHHHHH---HHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -CC-CCCCCHHHHHHHH---HHhhhCHHHccCCcccCCHHHHhh
Confidence 00 1123345555555 9999999999998 67765
No 103
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-35 Score=303.58 Aligned_cols=220 Identities=19% Similarity=0.246 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+++.. +++.||||.+.......+.+.+|+.++++++|||| ..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 457888899999999999999964 78999999998766556789999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--eEEEeccCCcccCC---
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--ARIMDFGFSRLTNG--- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~--- 421 (538)
++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++....
T Consensus 99 ~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 99 SGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999997655 59999999999999999999999 99999999999999987765 99999999873221
Q ss_pred -------------------CC-CCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 -------------------DA-SLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 -------------------~~-~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.+ +.++|||||||++|||++|+.||....... .....+....... .. .. .
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~~~~~~~~~~-~~--~~---~ 243 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR----DYRKTIQRILSVK-YS--IP---D 243 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC----CHHHHHHHHHTTC-CC--CC---T
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH----HHHHHHHHHhcCC-CC--CC---C
Confidence 13 334899999999999999999998643322 2222222221111 00 00 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++..+++ +||+.||++|||+.|+++.
T Consensus 244 ~~~~s~~~~~li~---~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 DIRISPECCHLIS---RIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TSCCCHHHHHHHH---HHSCSCTTTSCCHHHHHTS
T ss_pred cCCCCHHHHHHHH---HHccCChhHCcCHHHHHhC
Confidence 1112345555555 9999999999999999874
No 104
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.5e-36 Score=326.33 Aligned_cols=215 Identities=21% Similarity=0.265 Sum_probs=172.4
Q ss_pred CeEeecCCceEEEEEe---CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAML---LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~~g 349 (538)
+.||+|+||.||+|.+ .+++.||||+++... ...+++.+|++++++++||||+ .++||||+++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 4799999999999964 246789999997533 2357899999999999999993 35999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 455 ~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 455 PLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999998765 69999999999999999999999 9999999999999999999999999999875422
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++ |+.||...... .+ ...+..+.... . .
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~----~~~i~~~~~~~-----~-p 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EV----TAMLEKGERMG-----C-P 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HH----HHHHHTTCCCC-----C-C
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HH----HHHHHcCCCCC-----C-C
Confidence 16789999999999999998 99999853321 11 11122211110 1 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...++++ .+++.+||+.||++|||+.+|++.|+++..+
T Consensus 595 ~~~~~~l---~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 595 AGCPREM---YDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp TTCCHHH---HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHH---HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1223344 4455599999999999999999999988654
No 105
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=294.45 Aligned_cols=213 Identities=22% Similarity=0.308 Sum_probs=163.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------------------------cHHHHHHHHHHHhc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------------------------GEKQFLLEMKQVGL 331 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~E~~~l~~ 331 (538)
++|...+.||+|+||.||+|.. .+++.||||.+..... ..+++.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5788889999999999999995 4688999999864321 12458899999999
Q ss_pred CCCCCC-------------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCC
Q 040267 332 LKHPNL-------------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398 (538)
Q Consensus 332 l~H~ni-------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 398 (538)
++|||| ..++||||+++|+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 999999 236999999999998876443 59999999999999999999999 99999999999
Q ss_pred CeeeCCCCCeEEEeccCCcccCCC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 399 VILVDEDFDARIMDFGFSRLTNGD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 399 NIll~~~~~~kl~Dfg~a~~~~~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
||+++.++.+||+|||+++..... ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~- 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI- 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH-
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH-
Confidence 999999999999999998754321 25678999999999999999999975321
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+..... ..... . + .....++++..++. +||+.||++|||+.|+++
T Consensus 246 -------~~~~~~~~-~~~~~-~--~--~~~~~~~~l~~li~---~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 -------MCLHSKIK-SQALE-F--P--DQPDIAEDLKDLIT---RMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -------HHHHHHHH-HCCCC-C--C--SSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred -------HHHHHHHh-cccCC-C--C--CccccCHHHHHHHH---HHhhcChhhCCCHHHHhc
Confidence 11111111 11110 0 0 01122344555555 999999999999999875
No 106
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.7e-35 Score=291.72 Aligned_cols=232 Identities=18% Similarity=0.297 Sum_probs=173.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv 342 (538)
.++|...+.||+|+||.||+|.. .+|+.||+|.++... ...+++.+|++++++++||||. .++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 34688889999999999999995 579999999997422 2346688999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999752 23468999999999999999999999 999999999999999999999999999987432
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++||||||+++|||++|+.||..... .......... ......
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~~--- 257 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIE-QCDYPP--- 257 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHHH-TTCSCC---
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHhh-cccCCC---
Confidence 2 167789999999999999999999975321 1222222211 111111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
......++++..+++ +||+.||++|||+.+|++.|+++......+.
T Consensus 258 --~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 258 --LPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp --CCTTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred --CcccccCHHHHHHHH---HHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 111223345555555 9999999999999999999999988776553
No 107
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=306.10 Aligned_cols=240 Identities=19% Similarity=0.270 Sum_probs=180.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++|||| ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45778899999999999999964 58999999997533 345778899999999999999 236999
Q ss_pred eecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEeccCCcc
Q 040267 344 KYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDFGFSRL 418 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~ 418 (538)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999998654 2349999999999999999999999 999999999999999 7788899999999975
Q ss_pred cCCC------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 419 TNGD------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 419 ~~~~------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
.... ++.++|||||||++|||++|+.||............+...... ..
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-~p 244 (396)
T 4eut_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG-KP 244 (396)
T ss_dssp CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS-CC
T ss_pred ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC-CC
Confidence 4321 2457899999999999999999997543322111111111111 00
Q ss_pred cCCccccc---c------ccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 469 SGRIKDVI---D------KAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 469 ~~~~~~~~---d------~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...+..+. + ..+ ...........+.+++.+||+.||++|||+.|+++.++++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111000 0 001 1122344455566677799999999999999999999998764
No 108
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.3e-36 Score=304.26 Aligned_cols=232 Identities=22% Similarity=0.273 Sum_probs=174.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||. .+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4677789999999999999984 357899999997643 3346689999999999999992 35
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 99999999999999986432 58999999999999999999999 999999999999999999999999999998543
Q ss_pred CC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccc------cccHHHHHHHHhc
Q 040267 421 GD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGY------KGNLVNWIDQLSS 468 (538)
Q Consensus 421 ~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~------~~~~~~~~~~~~~ 468 (538)
.. ++.++||||||+++|||++|+.||......... .......+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 21 467899999999999999999998743221000 0000011111111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+.. .. .....++++. +++.+||+.||++|||+.|+++.|+.+....
T Consensus 259 ~~~~-----~~-~~~~~~~~l~---~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 259 EGQR-----LP-APPACPAEVH---ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TTCC-----CC-CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cccC-----CC-CCCcccHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1110 00 0112233444 4555999999999999999999999986654
No 109
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.3e-36 Score=305.16 Aligned_cols=178 Identities=17% Similarity=0.264 Sum_probs=153.6
Q ss_pred ccCHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-----CCCC-----
Q 040267 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-----HPNL----- 337 (538)
Q Consensus 269 ~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----H~ni----- 337 (538)
.+++.+.....++|...+.||+|+||.||+|.. .+++.||||+++......+.+..|+.++++++ ||||
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 344444455677899999999999999999995 56899999999865555667888999999997 9999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-------
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE------- 404 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~------- 404 (538)
..++||||+ +++|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccc
Confidence 345999999 8999999988765569999999999999999999999 99999999999999986
Q ss_pred ------------------CCCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCC
Q 040267 405 ------------------DFDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPF 446 (538)
Q Consensus 405 ------------------~~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~ 446 (538)
++.+||+|||+++.... .++.++|||||||++|||+||+.||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 78999999999975432 2788999999999999999999999
Q ss_pred CCCc
Q 040267 447 EINA 450 (538)
Q Consensus 447 ~~~~ 450 (538)
....
T Consensus 260 ~~~~ 263 (360)
T 3llt_A 260 RTHE 263 (360)
T ss_dssp CCSS
T ss_pred CCCc
Confidence 8643
No 110
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.2e-36 Score=299.83 Aligned_cols=214 Identities=18% Similarity=0.231 Sum_probs=167.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
.++|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|++++++++||||+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 346888899999999999999965 79999999997432 3457799999999999999993
Q ss_pred ---------------------------------------------------ccEEEeecCCCCHHHHhhcCCC-CCCCHH
Q 040267 339 ---------------------------------------------------KPLVYKYMSNGTLYSLLHSNGN-TALDWP 366 (538)
Q Consensus 339 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~-~~l~~~ 366 (538)
.++||||+++|+|.+++..... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 4799999999999999987642 346777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------------------------
Q 040267 367 SRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------------------------- 421 (538)
Q Consensus 367 ~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------------- 421 (538)
.+++++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 899999999999999999 9999999999999999999999999999875421
Q ss_pred ----------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHH
Q 040267 422 ----------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQ 491 (538)
Q Consensus 422 ----------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 491 (538)
.++.++||||||+++|||++|..|+... ...... ........ ........
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~-~~~~~~~~---------~~~~~~~~ 301 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITD-VRNLKFPL---------LFTQKYPQ 301 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHH-HHTTCCCH---------HHHHHCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHH-hhccCCCc---------ccccCChh
Confidence 1688999999999999999987765320 001111 11111100 01122233
Q ss_pred HHHHHhHccCCCCCCCCCHHHHHH
Q 040267 492 FLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 492 l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+++.+||+.||++|||+.|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 455666999999999999999986
No 111
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.3e-36 Score=303.34 Aligned_cols=229 Identities=21% Similarity=0.302 Sum_probs=178.7
Q ss_pred HHHHHHhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------
Q 040267 273 VHLIAATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------- 337 (538)
++.....++|...+.||+|+||.||+|... +++.||+|.+.... ....++.+|++++++++||||
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678889999999999999999853 36789999997543 234568899999999999999
Q ss_pred ----cccEEEeecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC
Q 040267 338 ----EKPLVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED 405 (538)
Q Consensus 338 ----~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 405 (538)
..++||||+++|+|.+++.... ...+++..+++++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCC
Confidence 3469999999999999997532 1357999999999999999999999 999999999999999999
Q ss_pred CCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccH
Q 040267 406 FDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNL 459 (538)
Q Consensus 406 ~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 459 (538)
+.+||+|||+++.... .++.++||||||+++|||+| |+.||......
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------- 247 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------- 247 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-------
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-------
Confidence 9999999999874321 16789999999999999999 89999753221
Q ss_pred HHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 460 VNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 460 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
...... ..+..... ....+..+.. ++.+||+.||++|||+.|+++.|+++.+
T Consensus 248 -~~~~~~-~~~~~~~~------~~~~~~~l~~---li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 248 -QVLRFV-MEGGLLDK------PDNCPDMLFE---LMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -HHHHHH-HTTCCCCC------CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -HHHHHH-HcCCcCCC------CCCCCHHHHH---HHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111111 11111110 1122334444 4559999999999999999999988744
No 112
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.2e-36 Score=303.04 Aligned_cols=228 Identities=21% Similarity=0.336 Sum_probs=177.7
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCC-C-----CEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLD-G-----SMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~-~-----~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
...++|...+.||+|+||.||+|.... + ..||+|.++... ...+.+.+|+++++++ +||||
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 345678889999999999999999532 3 489999997543 2346789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE 404 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 404 (538)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECC
Confidence 3469999999999999997532 2358999999999999999999999 99999999999999999
Q ss_pred CCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccccc
Q 040267 405 DFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGN 458 (538)
Q Consensus 405 ~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 458 (538)
++.+||+|||+++.... .++.++||||||+++|||+| |..||....... .
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~ 275 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----K 275 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----H
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----H
Confidence 99999999999974321 16788999999999999999 999997533211 1
Q ss_pred HHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 459 LVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
+...+.. +.. .. .....++.+. +++.+||+.||++|||+.||++.|+++.++.
T Consensus 276 ~~~~~~~----~~~-----~~-~~~~~~~~l~---~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 276 FYKLVKD----GYQ-----MA-QPAFAPKNIY---SIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHHH----TCC-----CC-CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhc----CCC-----CC-CCCCCCHHHH---HHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1111111 100 00 0111233444 4555999999999999999999999987653
No 113
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=303.72 Aligned_cols=240 Identities=18% Similarity=0.167 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEcccccc------------cHHHHHHHHHHHhcCCCCCCc-----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACKL------------GEKQFLLEMKQVGLLKHPNLE----- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~H~ni~----- 338 (538)
++|...+.||+|+||.||+|... ++..||+|.+..... ....+.+|+..+..++||||.
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999964 578999999865321 123467888999999999992
Q ss_pred ----------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC--
Q 040267 339 ----------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-- 406 (538)
Q Consensus 339 ----------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-- 406 (538)
.++||||+ +++|.+++...+ .+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCC
Confidence 36999999 999999998765 69999999999999999999999 9999999999999999877
Q ss_pred CeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc
Q 040267 407 DARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK 456 (538)
Q Consensus 407 ~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~ 456 (538)
.+||+|||+++.... .++.++|||||||++|||+||+.||.......
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--- 267 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--- 267 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH---
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc---
Confidence 999999999964310 16789999999999999999999996422111
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcccccC
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEEN 533 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~ 533 (538)
............ .+...+.........++++.++++ +||+.||++|||+.+|++.|+++....+..+.....
T Consensus 268 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~~~ 339 (345)
T 2v62_A 268 -VAVQTAKTNLLD-ELPQSVLKWAPSGSSCCEIAQFLV---CAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKG 339 (345)
T ss_dssp -HHHHHHHHHHHH-TTTHHHHHHSCTTSCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCCTT
T ss_pred -HHHHHHHHhhcc-cccHHHHhhccccccHHHHHHHHH---HHhhcCcccCCCHHHHHHHHhccCCcccCCCcccCC
Confidence 111111111110 111111111111123344555555 999999999999999999999876655554444433
No 114
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-35 Score=299.07 Aligned_cols=225 Identities=28% Similarity=0.430 Sum_probs=175.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCE--EEEEEcccc--cccHHHHHHHHHHHhcC-CCCCCc-----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSM--LAIKRLSAC--KLGEKQFLLEMKQVGLL-KHPNLE-----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~--vavK~~~~~--~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv 342 (538)
++|...+.||+|+||.||+|.. .++.. ||+|.++.. ....+++.+|++++.++ +||||. .++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4688889999999999999995 35654 499998642 23345689999999999 899993 4699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
|||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence 99999999999998653 2468999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 409 RIMDFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 409 kl~Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
||+|||+++.... .++.++||||||+++|||+| |+.||..... ......
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~ 253 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEK 253 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHH
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHHHHH
Confidence 9999999863221 15789999999999999998 9999975332 111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.. .+. .... ....+..+.. ++.+||+.||++|||+.|+++.|+++.++..
T Consensus 254 ~~-~~~-----~~~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 254 LP-QGY-----RLEK-PLNCDDEVYD---LMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp GG-GTC-----CCCC-CTTBCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred hh-cCC-----CCCC-CCCCCHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11 110 0001 1122334444 4559999999999999999999999987654
No 115
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.9e-36 Score=298.10 Aligned_cols=225 Identities=18% Similarity=0.240 Sum_probs=172.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc---------------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE---------------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~---------------~~lv 342 (538)
++|...+.||+|+||.||++.. .+++.||||++.... ...+.+.+|++++++++||||. .++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4688889999999999999995 579999999986432 3456789999999999999992 2489
Q ss_pred EeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||+++|+|.+++... ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 9999999999999762 23469999999999999999999999 999999999999999999999999999865421
Q ss_pred C-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 421 G-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 421 ~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
. .++.++||||||+++|||++|+.||...... ...+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~- 261 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQ- 261 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHH-
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhh-
Confidence 0 0477999999999999999999999632111 001111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. ... .. .....+.++.. ++.+||+.||.+|||+.|+++.|+.+...
T Consensus 262 ---~-~~~----~~-~~~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 262 ---N-QLS----IP-QSPRHSSALWQ---LLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp ---C-C------CC-CCTTSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ---c-cCC----CC-ccccCCHHHHH---HHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 0 000 00 01122334444 55599999999999999999999987643
No 116
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4e-35 Score=302.55 Aligned_cols=170 Identities=18% Similarity=0.219 Sum_probs=147.2
Q ss_pred hcCCCCCCeEeec--CCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------ccE
Q 040267 279 TSNFSAQNVLVST--WTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-----------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G--~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-----------~~l 341 (538)
.++|...+.||+| +||.||+|+.. +++.||||+++.... ..+.+.+|++++++++||||+ .++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3467888999999 99999999965 699999999975432 235688899999999999993 369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc--
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT-- 419 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~-- 419 (538)
||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 9999999999999987654569999999999999999999999 99999999999999999999999999986421
Q ss_pred ----------------------------C--CCCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 420 ----------------------------N--GDASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 420 ----------------------------~--~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
. ..++.++|||||||++|||++|+.||.....
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 0 1267899999999999999999999986443
No 117
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.9e-36 Score=294.54 Aligned_cols=217 Identities=19% Similarity=0.274 Sum_probs=174.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc--------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-------------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-------------------- 338 (538)
.+|...+.||+|+||.||+|... +++.||+|.++... +.+.+|++++++++||||.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 46888899999999999999965 79999999997543 4577899999999999992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEEC
Confidence 3699999999999999986544479999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 412 DFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 412 Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
|||++..... .++.++||||||+++|||++|..|+... ..+... ...
T Consensus 165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~~-~~~ 233 (284)
T 2a19_B 165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFTD-LRD 233 (284)
T ss_dssp CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHHH-HHT
T ss_pred cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHHH-hhc
Confidence 9999875432 1678999999999999999999887521 111111 111
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
+.+ . ...+..+..++ .+||+.||++|||+.|+++.|+.+.+...
T Consensus 234 ~~~--------~-~~~~~~~~~li---~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 234 GII--------S-DIFDKKEKTLL---QKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp TCC--------C-TTSCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccc--------c-ccCCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 111 1 12233444444 49999999999999999999998876543
No 118
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=304.24 Aligned_cols=218 Identities=17% Similarity=0.249 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|++++++++|||| ..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45788889999999999999984 578999999997543 234568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++ +++.+||+|||+++...
T Consensus 90 E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 90 DLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp CCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999998765 69999999999999999999999 9999999999999998 46789999999997543
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++||||+||++|||++|+.||...... ...... ..+... ...
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--------~~~~~i-~~~~~~-~~~ 234 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--------RLYQQI-KAGAYD-FPS 234 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHH-HHTCCC-CCT
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--------HHHHHH-HhCCCC-CCc
Confidence 2 1778999999999999999999999753321 111111 111110 001
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+. ....++++.++++ +||+.||++|||+.|+++.
T Consensus 235 ~~--~~~~s~~~~~li~---~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 PE--WDTVTPEAKDLIN---KMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TT--TTTSCHHHHHHHH---HHSCSSTTTSCCHHHHHHS
T ss_pred cc--cccCCHHHHHHHH---HHcCCChhHCCCHHHHhcC
Confidence 11 1123345555555 9999999999999999873
No 119
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=289.47 Aligned_cols=227 Identities=20% Similarity=0.252 Sum_probs=168.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCC---CCCCc---------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLK---HPNLE--------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~---H~ni~--------- 338 (538)
.+++|...+.||+|+||.||+|.. .+++.||||.++... .....+.+|++++++++ ||||+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999994 578999999986322 12356778888877775 99992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+. |+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence 368999997 599999988765569999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc-
Q 040267 412 DFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS- 468 (538)
Q Consensus 412 Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 468 (538)
|||+++.... .++.++|||||||++|||++|+.||......+ .+.........
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH----HHHHHHHHHCCC
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCC
Confidence 9999975432 17889999999999999999999997643321 11111111100
Q ss_pred -cCCccccc---cccccC----------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 -SGRIKDVI---DKALTG----------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 -~~~~~~~~---d~~l~~----------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.... ...... ...++++ .+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESG---AQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHH---HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHH---HHHHHHHhcCCCccCCCHHHHhc
Confidence 00010000 000000 1122344 44555999999999999999876
No 120
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.4e-35 Score=290.88 Aligned_cols=225 Identities=19% Similarity=0.237 Sum_probs=165.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||+||+|.. .+++.||+|+++... ...+.+.+|++++++++|||| ..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678889999999999999996 468999999997433 223678899999999999999 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9986 6666665533 269999999999999999999999 9999999999999999999999999999975431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc--CCccccc--
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS--GRIKDVI-- 476 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 476 (538)
.++.++|||||||++|||++|..|+........ .+.......... ..+....
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD---QLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH---HHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhhhhhccc
Confidence 168899999999999999999888653222111 111111111100 0000000
Q ss_pred -cc----------ccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 477 -DK----------ALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 477 -d~----------~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+. .+. ....+.++.++++ +|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQ---NLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHH---HHhccChhhCCCHHHHhc
Confidence 00 000 0112344455555 999999999999999875
No 121
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.9e-35 Score=296.70 Aligned_cols=216 Identities=18% Similarity=0.249 Sum_probs=165.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|+.. +++.||+|.++... ...+.+.+|..++.++ +|||| ..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888899999999999999964 58899999997543 2235578899999988 89999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998754 59999999999999999999999 9999999999999999999999999999975211
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||++|+.||................+......... .
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------C
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------C
Confidence 167899999999999999999999975322111111111112221111111 1
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
+ ....+.++..+++ +||+.||++||++
T Consensus 238 ~-p~~~s~~~~~li~---~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 I-PRSLSVKAASVLK---SFLNKDPKERLGC 264 (345)
T ss_dssp C-CTTSCHHHHHHHH---HHTCSSTTTSTTC
T ss_pred C-CCCCCHHHHHHHH---HHhcCCHhHCCCC
Confidence 1 1123345555555 9999999999996
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=298.41 Aligned_cols=218 Identities=18% Similarity=0.274 Sum_probs=160.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
..++|...+.||+|+||.||+|+.. +++.||||.++... ..+.+.+|++++++++|||| ..++||||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3467888899999999999999965 58899999997543 34668899999999999999 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~- 421 (538)
+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999998765 58999999999999999999999 99999999999999975 88999999999875432
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||....... .+ ..... ..... ...+.
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~---~~~i~-~~~~~-~~~~~- 274 (349)
T 2w4o_A 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ----FM---FRRIL-NCEYY-FISPW- 274 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH----HH---HHHHH-TTCCC-CCTTT-
T ss_pred cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH----HH---HHHHH-hCCCc-cCCch-
Confidence 17889999999999999999999997533211 01 11111 11110 11110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.++.++++ +||+.||++|||+.|+++
T Consensus 275 -~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 -WDEVSLNAKDLVR---KLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred -hhhCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 0122334455555 999999999999999986
No 123
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.2e-35 Score=292.14 Aligned_cols=168 Identities=23% Similarity=0.327 Sum_probs=131.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.++... ...+.+.+|++++++++|||| ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46788999999999999999995 468999999996432 334678899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 345 YMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|++ |+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999987532 2358999999999999999999999 999999999999999999999999999987532
Q ss_pred C------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 G------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 ~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. .++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 16789999999999999999999998643
No 124
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-34 Score=291.00 Aligned_cols=212 Identities=17% Similarity=0.286 Sum_probs=171.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+.+++.++|||| ..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888899999999999999954 69999999997532 335678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 9999999999998765 59999999999999999999999 9999999999999999999999999999975432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ........ +.. .+ ..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~-~~~------~~-p~ 224 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILN-AEL------RF-PP 224 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-CCC------CC-CT
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-CCC------CC-CC
Confidence 1678999999999999999999999753321 11112111 111 01 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
..+.++.++++ +|++.||++|| +++|+++
T Consensus 225 ~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 225 FFNEDVKDLLS---RLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp TSCHHHHHHHH---HHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCHHHHHHHH---HHhccCHHHcCCCcCCCHHHHhc
Confidence 23445555555 99999999999 8888875
No 125
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=8.9e-35 Score=296.86 Aligned_cols=218 Identities=18% Similarity=0.254 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++|||| ..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999954 689999999975432 23568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||++....
T Consensus 108 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999998665 69999999999999999999999 999999999999999865 459999999997543
Q ss_pred C----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 G----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .++.++|||||||++|||++|+.||...... ...... ..+... ...+
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i-~~~~~~-~~~~ 252 (362)
T 2bdw_A 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQI-KAGAYD-YPSP 252 (362)
T ss_dssp TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-HHTCCC-CCTT
T ss_pred CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHH-HhCCCC-CCcc
Confidence 2 1778999999999999999999999753221 111111 111110 0000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. ...+.++.+++. +||+.||++|||+.|+++.
T Consensus 253 ~~--~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EW--DTVTPEAKSLID---SMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GG--GGSCHHHHHHHH---HHSCSSGGGSCCHHHHTTS
T ss_pred cc--cCCCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 00 112334455555 9999999999999998864
No 126
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.7e-35 Score=296.77 Aligned_cols=212 Identities=18% Similarity=0.315 Sum_probs=171.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+++++.++|||| ..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 46888899999999999999964 68999999996432 335678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999998755 59999999999999999999999 9999999999999999999999999999985432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ....... .+.. .+ ..
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~-~~~~------~~-p~ 259 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------QIYEKIV-SGKV------RF-PS 259 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCC------CC-CT
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--------HHHHHHH-cCCC------CC-CC
Confidence 2688999999999999999999999753321 1111111 1111 01 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
..+.++..+++ +||+.||++||+ ++||++
T Consensus 260 ~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 260 HFSSDLKDLLR---NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TCCHHHHHHHH---HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCHHHHHHHH---HHhhcCHHhccCCccCCHHHHHh
Confidence 23345555555 999999999998 888875
No 127
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.9e-35 Score=292.46 Aligned_cols=214 Identities=17% Similarity=0.249 Sum_probs=167.0
Q ss_pred cCCCCC-CeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHH-hcCCCCCCc---------------ccE
Q 040267 280 SNFSAQ-NVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQV-GLLKHPNLE---------------KPL 341 (538)
Q Consensus 280 ~~f~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l-~~l~H~ni~---------------~~l 341 (538)
++|... +.||+|+||.||+|.. .+++.||+|.++. ...+.+|+.++ +..+||||. .++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 456555 6799999999999995 5689999999864 34677888888 556899992 368
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++..
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 9999999999999998765679999999999999999999999 99999999999999998 78999999999998
Q ss_pred cCC-CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC-----CCcHHHHHHH
Q 040267 419 TNG-DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG-----KGYDDEILQF 492 (538)
Q Consensus 419 ~~~-~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-----~~~~~~~~~l 492 (538)
... .++.++|||||||++|||+||+.||......... ......+....... ...+.++.
T Consensus 170 ~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (299)
T 3m2w_A 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------PGMKTRIRMGQYEFPNPEWSEVSEEVK-- 234 (299)
T ss_dssp CTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCCSSCTTCCSSCHHHHTTSCHHHH--
T ss_pred cccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------HHHHHHHhhccccCCchhcccCCHHHH--
Confidence 765 4899999999999999999999999753321100 00000000000000 11233444
Q ss_pred HHHHhHccCCCCCCCCCHHHHHHH
Q 040267 493 LQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 493 ~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+++.+||+.||++|||+.|+++.
T Consensus 235 -~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 235 -MLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -HHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HHHHHHcccChhhCCCHHHHhcC
Confidence 45559999999999999999973
No 128
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-35 Score=290.14 Aligned_cols=217 Identities=21% Similarity=0.255 Sum_probs=167.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
++|...+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||. .++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4577889999999999999995 468999999997543 3457899999999999999993 3699999
Q ss_pred cCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccC
Q 040267 346 MSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 420 (538)
+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999986431 2469999999999999999999999 999999999999999 456889999999997543
Q ss_pred C---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 G---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .++.++||||||+++|||++|+.||...... ........... . ..
T Consensus 179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~-~----~~ 245 (285)
T 3is5_A 179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEP-N----YA 245 (285)
T ss_dssp --------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC-C----CC
T ss_pred CcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCc-c----cc
Confidence 2 1677899999999999999999999853321 11111111100 0 00
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
......++++.++++ +||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~li~---~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECRPLTPQAVDLLK---QMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--CCCCHHHHHHHH---HHTCSCTTTSCCHHHHHT
T ss_pred cccCcCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 001112344444444 999999999999999985
No 129
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.8e-35 Score=292.00 Aligned_cols=224 Identities=20% Similarity=0.301 Sum_probs=170.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCCc---------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNLE--------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni~--------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||+++.... ....+.+|++++.+++||||+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688889999999999999995 5789999999975432 235688999999999999991
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++||||+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 179999999999999998765 59999999999999999999999 9999999999999999999999999999874
Q ss_pred cCC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 419 TNG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 419 ~~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
... .++.++||||||+++|||+||+.||...... ............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--------SVAYQHVREDPI 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCCCC
Confidence 321 1678899999999999999999999753321 111111111110
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH-HHHHHhHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVY-ISLCSIAE 522 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl-~~L~~i~~ 522 (538)
.+.......+.++..+ +.+||+.||++||++.+++ +.+.++..
T Consensus 238 ----~~~~~~~~~~~~l~~l---i~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 238 ----PPSARHEGLSADLDAV---VLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ----CHHHHSTTCCHHHHHH---HHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ----CcccccCCCCHHHHHH---HHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 0111111223344444 4599999999999766555 55665543
No 130
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.7e-35 Score=289.07 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=170.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc----HHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||.+...... .+++.+|+..+.+++|||| ..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999964 4899999999764322 3678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA 423 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 423 (538)
||+++++|.+++... ....++.+|+.|++.||+|||+ .+|+||||||+|||++.++.+||++++.. ..+
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~----~~~ 179 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATM----PDA 179 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCC----TTC
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecccc----CCC
Confidence 999999999999642 3556789999999999999999 99999999999999999999999977654 347
Q ss_pred CCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCC
Q 040267 424 SLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVR 503 (538)
Q Consensus 424 ~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~d 503 (538)
+.++|||||||++|||+||+.||......+..... .. ........+.......++++..++ .+||+.|
T Consensus 180 ~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~l~~li---~~~l~~d 247 (286)
T 3uqc_A 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ER-DTAGQPIEPADIDRDIPFQISAVA---ARSVQGD 247 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CB-CTTSCBCCHHHHCTTSCHHHHHHH---HHHHCTT
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HH-HhccCCCChhhcccCCCHHHHHHH---HHHcccC
Confidence 89999999999999999999999864432211000 00 000000000000112233444444 4999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhc
Q 040267 504 PKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 504 P~~RPs~~evl~~L~~i~~~~ 524 (538)
|++| |+.|+++.|+++....
T Consensus 248 P~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 248 GGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp SSCC-CHHHHHHHHHHHHC--
T ss_pred CccC-CHHHHHHHHHHHhccC
Confidence 9999 9999999999987543
No 131
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.8e-35 Score=301.28 Aligned_cols=219 Identities=16% Similarity=0.255 Sum_probs=166.2
Q ss_pred cCCCCC-CeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhc-CCCCCCc---------------ccE
Q 040267 280 SNFSAQ-NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGL-LKHPNLE---------------KPL 341 (538)
Q Consensus 280 ~~f~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~-l~H~ni~---------------~~l 341 (538)
++|... ++||+|+||.||+|... +++.||||+++. ...+.+|+.++.+ .+||||+ .|+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 355554 68999999999999954 689999999864 2467788888744 5899992 368
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
||||+++|+|.+++.......+++.++..|+.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 9999999999999987655579999999999999999999999 99999999999999997 78999999999975
Q ss_pred cCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 419 TNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 419 ~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
... .++.++|||||||++|||++|+.||.......... .+...+. .+... ..
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~i~----~~~~~-~~ 287 (400)
T 1nxk_A 214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GMKTRIR----MGQYE-FP 287 (400)
T ss_dssp CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-SHHHHHH----HTCCC-CC
T ss_pred cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-HHHHHHH----cCccc-CC
Confidence 432 27889999999999999999999998644322111 1211111 11110 00
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+ .....++++.++++ +||+.||++|||+.|+++.
T Consensus 288 ~~--~~~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 288 NP--EWSEVSEEVKMLIR---NLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TT--TTTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred Cc--ccccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 00 01123345555555 9999999999999999874
No 132
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.8e-35 Score=298.03 Aligned_cols=215 Identities=20% Similarity=0.291 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+++++.++|||| ..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46888899999999999999954 58899999986432 334678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999998765 69999999999999999999999 9999999999999999999999999999975421
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||...... ........... ...
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~-~~~------ 237 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFET-TVV------ 237 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHH-CCC------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhh-ccc------
Confidence 1577899999999999999999999753321 11111111111 100
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWS-MYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 515 (538)
.. ....+.++..+++ +||+.||++||+ +++|.+
T Consensus 238 ~~-p~~~s~~~~~li~---~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TY-PSAWSQEMVSLLK---KLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CC-CTTSCHHHHHHHH---HHSCSSGGGSCCSHHHHHT
T ss_pred CC-CCcCCHHHHHHHH---HHhcCCHhHhcccHHHHHc
Confidence 00 1123345555555 999999999998 666654
No 133
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=286.33 Aligned_cols=214 Identities=21% Similarity=0.302 Sum_probs=167.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++|||| ..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688889999999999999995 579999999996432 234678999999999999999 33699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999998653 368999999999999999999999 9999999999999999999999999999875431
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||++|+.||......+.. .... .. +..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~----~~---~~~ 230 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL--------NKVV----LA---DYE 230 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CC----SS---CCC
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH--------HHHh----hc---ccC
Confidence 1567999999999999999999999754322110 0000 00 011
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....+.++.++++ +||+.||++|||+.++++
T Consensus 231 ~-~~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 M-PSFLSIEAKDLIH---QLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp C-CTTSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred C-ccccCHHHHHHHH---HHcccCHhhCCCHHHHhc
Confidence 1 1122344455554 999999999999999976
No 134
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-34 Score=306.48 Aligned_cols=234 Identities=20% Similarity=0.233 Sum_probs=178.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~ 345 (538)
.++|...++||+|+||.||+|.. .+++.||||++..... ..++.+|++++..++|++. ..++||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 35788999999999999999995 5699999998764332 3458899999999987554 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~- 421 (538)
+ +++|.+++.... ..+++.+++.|+.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 85 ~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred C-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 9 899999998643 269999999999999999999999 999999999999999 5889999999999974321
Q ss_pred -----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 422 -----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 422 -----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.++.++|||||||++|||++|+.||........ ......+.... .
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~----~ 233 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKK----V 233 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHH----H
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhcc----c
Confidence 156789999999999999999999986433211 01111111100 0
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
...++. +.. ..+++ +.+++..||+.||++||++.+|++.|+++....+...+
T Consensus 234 ~~~~~~-l~~-~~p~~---l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~ 285 (483)
T 3sv0_A 234 ATSIEA-LCR-GYPTE---FASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFD 285 (483)
T ss_dssp HSCHHH-HHT-TSCHH---HHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred cccHHH-Hhc-CCcHH---HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCcc
Confidence 011110 001 12234 44555599999999999999999999999887766643
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-34 Score=283.48 Aligned_cols=212 Identities=19% Similarity=0.309 Sum_probs=156.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+++++.++|||| ..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4789999999999999999994 568999999997532 235678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+ +++|.+++.... .+++.++.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 678888887665 59999999999999999999999 99999999999999999999999999999754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++||||||+++|||++|+.||...... ....... .+.. .+
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~-~~~~------~~ 231 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNIS-NGVY------TL 231 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCC------CC
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-hCCC------CC
Confidence 367899999999999999999999753221 1111111 1110 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+..+.++++ +|++.||++|||+.|+++.
T Consensus 232 -~~~~~~~~~~li~---~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 232 -PKFLSPGAAGLIK---RMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CTTSCHHHHHHHH---HHSCSSGGGSCCHHHHTTC
T ss_pred -CccCCHHHHHHHH---HHhhcCHhHCCCHHHHhhC
Confidence 1122344455555 9999999999999999763
No 136
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.2e-36 Score=305.35 Aligned_cols=223 Identities=8% Similarity=-0.022 Sum_probs=160.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHH---HHHhcCCCCCCc-------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEM---KQVGLLKHPNLE------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~---~~l~~l~H~ni~------------- 338 (538)
.+|...+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+ +.|+. +||||+
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 3577889999999999999995 478999999997643 2235577885 45555 699962
Q ss_pred ----------------------ccEEEeecCCCCHHHHhhcCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCc
Q 040267 339 ----------------------KPLVYKYMSNGTLYSLLHSNGNTALDWPSR------LRIGLGAARGLSWLHHCCHPPC 390 (538)
Q Consensus 339 ----------------------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~i 390 (538)
.++||||++ |+|.+++...+. .+++..+ ..++.|++.||+|||+ .+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQS---KGL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCC
Confidence 489999999 899999986432 3566666 7888999999999999 999
Q ss_pred cccCCCCCCeeeCCCCCeEEEeccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 391 LHQNISSSVILVDEDFDARIMDFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 391 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
+||||||+|||++.++.+||+|||+++.... .++.++|||||||++|||+||+.||..
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999875432 168899999999999999999999986
Q ss_pred CcccccccccHHHHHHHHhccCCccccccccccC---CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHHHhH
Q 040267 449 NASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG---KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI--SLCSIA 521 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~~i~ 521 (538)
........ ................ ...++.+.+++. +||+.||++|||+.|+++ .++++.
T Consensus 296 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 296 VTPGIKGS----------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG---RFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp CCTTCTTC----------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHH---HHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred cCcccccc----------hhhhhhhhccccccchhhccCCCHHHHHHHH---HHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 53321100 0000000000111111 122345555555 999999999999999985 344443
No 137
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.7e-35 Score=304.14 Aligned_cols=217 Identities=15% Similarity=0.125 Sum_probs=166.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHH---HHHhcCCCCCCc------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEM---KQVGLLKHPNLE------------ 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~---~~l~~l~H~ni~------------ 338 (538)
.++|...+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+ +.+++++||||+
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45678889999999999999994 57999999999632 22346789999 556666899981
Q ss_pred -----------------------ccEEEeecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 040267 339 -----------------------KPLVYKYMSNGTLYSLLHSNGN-----TALDWPSRLRIGLGAARGLSWLHHCCHPPC 390 (538)
Q Consensus 339 -----------------------~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 390 (538)
.++||||+ +|+|.+++...+. ..+++..++.|+.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 57999999 6899999986431 234468889999999999999999 999
Q ss_pred cccCCCCCCeeeCCCCCeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHH
Q 040267 391 LHQNISSSVILVDEDFDARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 391 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~ell 440 (538)
+||||||+|||++.++.+||+|||+++.... .++.++|||||||++|||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999985432 3778999999999999999
Q ss_pred hCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHH
Q 040267 441 TGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI--SLC 518 (538)
Q Consensus 441 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~ 518 (538)
||+.||........ ...+... ....++++.++++ +||+.||++|||+.|+++ .++
T Consensus 308 tg~~Pf~~~~~~~~-----------------~~~~~~~---~~~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 308 CADLPITKDAALGG-----------------SEWIFRS---CKNIPQPVRALLE---GFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HSSCCC------CC-----------------SGGGGSS---CCCCCHHHHHHHH---HHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HCCCCCcccccccc-----------------hhhhhhh---ccCCCHHHHHHHH---HHcCCCchhCCCHHHHhhChHHH
Confidence 99999975332111 1111110 0122345555555 999999999999999996 455
Q ss_pred HhHH
Q 040267 519 SIAE 522 (538)
Q Consensus 519 ~i~~ 522 (538)
++.+
T Consensus 365 ~~~~ 368 (377)
T 3byv_A 365 QLRT 368 (377)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 138
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=289.02 Aligned_cols=228 Identities=21% Similarity=0.298 Sum_probs=171.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
++|...+.||+|+||.||+|... +|+.||+|++...... .+.+.+|++++++++||||. .++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888899999999999999964 5899999998654322 35688999999999999993 369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887655 59999999999999999999999 9999999999999999999999999999975431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHH--------HHHHHhccCCc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN--------WIDQLSSSGRI 472 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 472 (538)
.++.++||||||+++|||++|+.||......+... .+.. +..........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY-LIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCSCCHHHHHHHHTCGGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhccccccccccccccccc
Confidence 26889999999999999999999998644322110 0000 00000000000
Q ss_pred c--ccccccc------cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 473 K--DVIDKAL------TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 473 ~--~~~d~~l------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...++.- .....+.. +.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYP---ALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHH---HHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHH---HHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0000000 00112223 4455559999999999999999863
No 139
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-34 Score=287.69 Aligned_cols=225 Identities=18% Similarity=0.246 Sum_probs=172.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.++++++|||| ..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999954 688999999975432 23678899999999999999 33699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998754 59999999999999999999999 9999999999999999999999999999864321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||++|+.||...... ......... .. .+
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~-~~---~~ 254 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---------VMGAHINQA-IP---RP 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---------HHHHHHHSC-CC---CG
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---------HHHHHhccC-CC---Cc
Confidence 1677999999999999999999999753211 111111111 00 01
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHhHHhc
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKW-SMYQVYISLCSIAEQL 524 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~i~~~~ 524 (538)
.......+.++..+++ +||+.||++|| |++++++.|+++....
T Consensus 255 ~~~~~~~~~~l~~li~---~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 255 STVRPGIPVAFDAVIA---RGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GGTSTTCCTHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cccCCCCCHHHHHHHH---HhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0111122334444555 99999999999 9999999999876544
No 140
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5e-35 Score=297.10 Aligned_cols=215 Identities=21% Similarity=0.308 Sum_probs=169.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
+.|...+.||+|+||.||+|.. .+++.||||++..... ..+++.+|++++++++||||+ .++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477888999999999999995 5789999999964322 235688999999999999993 35999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||++ |+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 9997 68888886433 369999999999999999999999 999999999999999999999999999987543
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
..++.++|||||||++|||++|+.||..... ........... .+...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--------~~~~~~~~~~~------~~~~~ 274 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNE------SPALQ 274 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC------CCCCC
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhcC------CCCCC
Confidence 1267789999999999999999999975322 11122222111 11111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....++.+..+++ +||+.||++|||+.++++.
T Consensus 275 ~~~~~~~l~~li~---~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 SGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCHHHHHHHH---HHcccChhhCcCHHHHhhC
Confidence 2233445555555 9999999999999999864
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1e-34 Score=305.78 Aligned_cols=212 Identities=22% Similarity=0.378 Sum_probs=171.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++|||| ..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788899999999999999964 79999999996532 234678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999998655 69999999999999999999999 99999999999999999999999999999864321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++|||||||++|||++|+.||...... ....... .+...
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~-~~~~~------- 234 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKIC-DGIFY------- 234 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHH-TTCCC-------
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHh-cCCcC-------
Confidence 357899999999999999999999853321 1111111 11110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+.++.++++ +||+.||++|||+.|+++
T Consensus 235 ~p~~~s~~~~~Li~---~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 TPQYLNPSVISLLK---HMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCTTCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CCccCCHHHHHHHH---HHcCCCchhCcCHHHHHh
Confidence 01122345555555 999999999999999987
No 142
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.6e-35 Score=299.68 Aligned_cols=217 Identities=17% Similarity=0.270 Sum_probs=167.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
+.|...+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+.+++.++|||| ..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4688889999999999999995 468999999986321 245779999999999999999 3369
Q ss_pred EEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a 416 (538)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999998886532 2358999999999999999999999 99999999999999986654 999999999
Q ss_pred cccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 417 RLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 417 ~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
+.... .++.++|||||||++|||++|+.||..... .+ ..... .+...
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~---~~~i~-~~~~~ 250 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RL---FEGII-KGKYK 250 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HH---HHHHH-HTCCC
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HH---HHHHH-cCCCC
Confidence 75432 167899999999999999999999975321 11 11111 11110
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.++... ...++++.+++ .+||+.||++|||+.|+++
T Consensus 251 --~~~~~~-~~~s~~~~~li---~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 --MNPRQW-SHISESAKDLV---RRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CCHHHH-TTSCHHHHHHH---HHHTCSSTTTSCCHHHHHT
T ss_pred --CCcccc-ccCCHHHHHHH---HHHCCCChhHCcCHHHHhc
Confidence 000000 11233444444 4999999999999999986
No 143
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=297.83 Aligned_cols=225 Identities=20% Similarity=0.301 Sum_probs=177.6
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc----------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE---------- 338 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~---------- 338 (538)
.+.++....++|...+.||+|+||.||+|.. .+++.||||.+.......+.+.+|+.++.++ +||||.
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3344555677899999999999999999996 5789999999976655668899999999999 799992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEEC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEe
Confidence 3699999999999999987644469999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 412 DFGFSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 412 Dfg~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|||++..... .++.++||||||+++|||++|+.||....... ..
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~ 243 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--------AL 243 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HH
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--------HH
Confidence 9999875321 15778999999999999999999997532211 11
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ... +.......+..+..+++ +||+.||++|||+.|+++
T Consensus 244 ~~~~~-~~~-----~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 FLIPR-NPA-----PRLKSKKWSKKFQSFIE---SCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHH-SCC-----CCCSCSCSCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred HHhhc-Ccc-----ccCCccccCHHHHHHHH---HHhccChhhCCCHHHHhh
Confidence 11111 111 11112223445555555 999999999999999987
No 144
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.7e-35 Score=304.75 Aligned_cols=224 Identities=16% Similarity=0.179 Sum_probs=175.8
Q ss_pred HHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC---------
Q 040267 272 LVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL--------- 337 (538)
Q Consensus 272 ~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni--------- 337 (538)
+.++....++|...++||+|+||.||+|+.. +++.||+|++++.. ...+.+.+|+.+++.++||||
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3456667788999999999999999999964 58999999996522 223458899999999999999
Q ss_pred --cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
..|+||||+++|+|.++++.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccce
Confidence 346999999999999999865 48999999999999999999999 9999999999999999999999999999
Q ss_pred CcccCCC----------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 416 SRLTNGD----------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 416 a~~~~~~----------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
++..... ++.++|||||||++|||++|+.||......+ ......
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--------~~~~i~ 286 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIM 286 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh--------HHHHHH
Confidence 9754321 4578999999999999999999998543221 111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
........ + .....+.++..+++ +|++.+|.+ ||+++||++.
T Consensus 287 ~~~~~~~~--p--~~~~~s~~~~~li~---~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 287 NHKNSLTF--P--DDNDISKEAKNLIC---AFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp THHHHCCC--C--TTCCCCHHHHHHHH---HHSSCGGGCTTSSCHHHHHTS
T ss_pred hccccccC--C--CcccccHHHHHHHH---HHccChhhhCCCCCHHHHhcC
Confidence 10000000 0 01123456666666 999999988 9999999864
No 145
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-34 Score=296.86 Aligned_cols=219 Identities=18% Similarity=0.296 Sum_probs=171.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|++++++++|||| ..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457888999999999999999954 68999999997543 334578999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC--CCCeEEEeccCCcccCCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE--DFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~- 422 (538)
+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999997653 359999999999999999999999 99999999999999974 478999999999865421
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++|||||||++|||++|+.||...... ........ .... .+...
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~i~~-~~~~--~~~~~- 273 (387)
T 1kob_A 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--------ETLQNVKR-CDWE--FDEDA- 273 (387)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHH-CCCC--CCSST-
T ss_pred ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-CCCC--CCccc-
Confidence 678899999999999999999999853321 11111111 1110 01111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++.++++ +||+.||++|||+.|+++.
T Consensus 274 ~~~~s~~~~~li~---~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIK---NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHH---HHcCCChhHCcCHHHHhhC
Confidence 0122345555555 9999999999999999873
No 146
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.8e-35 Score=295.93 Aligned_cols=214 Identities=21% Similarity=0.305 Sum_probs=170.3
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
...++|...+.||+|+||.||+|+.. +++.||+|.++.. ....+.+..|..++..+ +|||| ..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999964 6889999999753 23456688899999887 89999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 69999999999999998754 59999999999999999999999 99999999999999999999999999999753
Q ss_pred CC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 420 NG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 420 ~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.. .++.++|||||||++|||++|+.||...... ........ +.
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~-~~----- 234 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRM-DN----- 234 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CC-----
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHh-CC-----
Confidence 21 1688999999999999999999999853321 11111111 11
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMY-QVY 514 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 514 (538)
+.+ ....+.++.++++ +||+.||++||++. ||+
T Consensus 235 -~~~-p~~~s~~~~~li~---~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -PFY-PRWLEKEAKDLLV---KLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -CCC-CTTSCHHHHHHHH---HHSCSSGGGSBTTBSCGG
T ss_pred -CCC-CcccCHHHHHHHH---HHhcCCHhHcCCChHHHH
Confidence 111 1123445555555 99999999999997 664
No 147
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-34 Score=284.14 Aligned_cols=214 Identities=22% Similarity=0.284 Sum_probs=170.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|... ++..||+|.+.... .....+.+|+.++++++|||| ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457888899999999999999854 57899999986432 234678999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999998765 58999999999999999999999 9999999999999999999999999998864322
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++||||||+++|||++|+.||...... ........ .. ...
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~------~~~- 226 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISR-VE------FTF- 226 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-TC------CCC-
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHh-CC------CCC-
Confidence 1678999999999999999999999753321 11111111 10 001
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....++.+.++++ +||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PDFVTEGARDLIS---RLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CTTSCHHHHHHHH---HHCCSSGGGSCCHHHHHHC
T ss_pred CCcCCHHHHHHHH---HHhccChhhCCCHHHHhhC
Confidence 1123344555555 9999999999999999975
No 148
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=295.48 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=161.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcC-CCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLL-KHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~ 343 (538)
++|+..++||+|+||+||+|... +++.||||++..... ...++..|+..+.++ +||||+ .++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888999999999999999965 799999999865332 233455666666655 899993 36999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+ +|+|.+++...+ ..++|..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 679999887654 369999999999999999999999 8999999999999999999999999999875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++|..|+..... |. . ...+.. .+.+..
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~-~-~~~~~~----~~~~~~ 275 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----------WQ-Q-LRQGYL----PPEFTA 275 (311)
T ss_dssp ---CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HH-H-HTTTCC----CHHHHT
T ss_pred CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HH-H-HhccCC----Cccccc
Confidence 167899999999999999999777653111 11 1 111111 111111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++++ .+++.+||+.||++|||+.|+++
T Consensus 276 -~~~~~l---~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 276 -GLSSEL---RSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -TSCHHH---HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCCHHH---HHHHHHHcCCChhhCcCHHHHHh
Confidence 122344 44555999999999999999985
No 149
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2e-34 Score=290.23 Aligned_cols=213 Identities=18% Similarity=0.263 Sum_probs=163.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-----------~ 338 (538)
.++|...+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++++++|||| .
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688889999999999999996 468999999997532 223567889999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 469999999999999998755 58999999999999999999999 9999999999999999999999999999874
Q ss_pred cCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 419 TNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 419 ~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
... .++.++||||||+++|||++|+.||...... ........ ...
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~-~~~--- 238 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--------KTIDKILK-CKL--- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHH-TCC---
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHh-CCC---
Confidence 211 1678999999999999999999999853321 11111111 110
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
.+ ....+.++.++++ +||+.||++|| ++.|+++
T Consensus 239 ---~~-p~~~~~~~~~li~---~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ---NL-PPYLTQEARDLLK---KLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---CC-CTTSCHHHHHHHH---HHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CC-CCCCCHHHHHHHH---HHHhcCHhhccCCCCCCHHHHHc
Confidence 01 1123345555555 99999999999 7778776
No 150
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.6e-34 Score=283.06 Aligned_cols=213 Identities=22% Similarity=0.276 Sum_probs=166.8
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------ccEE
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------KPLV 342 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------~~lv 342 (538)
|...+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+ .++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 55567899999999999995 468899999987533 2346689999999999999992 3699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeC-CCCCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVD-EDFDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~ 419 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||++...
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999998754 58999999999999999999999 77 99999999999998 7899999999998643
Q ss_pred CC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 420 NG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 420 ~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.. .++.++||||||+++|||++|+.||..... ......... .+......+
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~-~~~~~~~~~-- 252 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVT-SGVKPASFD-- 252 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHT-TTCCCGGGG--
T ss_pred cccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHHHh-ccCCccccC--
Confidence 32 167899999999999999999999975322 111222111 111111111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++. +++.+||+.||++|||+.|+++
T Consensus 253 ---~~~~~~l~---~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 ---KVAIPEVK---EIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GCCCHHHH---HHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCCCHHHH---HHHHHHccCChhhCCCHHHHhh
Confidence 11223444 4555999999999999999985
No 151
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=296.33 Aligned_cols=219 Identities=14% Similarity=0.095 Sum_probs=174.4
Q ss_pred HhcCCCCCCeEeecCCceEEEEE------eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC---CCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAM------LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~------~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---H~ni----------- 337 (538)
..++|...+.||+|+||.||+|. ..+++.||||+++.. ...++..|++++.+++ |+||
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 34678888999999999999994 456889999999753 3567888888888887 8888
Q ss_pred cccEEEeecCCCCHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------
Q 040267 338 EKPLVYKYMSNGTLYSLLHSN---GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------- 404 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------- 404 (538)
..++||||+++|+|.+++... ....+++..++.|+.|++.||+|||+ .+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence 346999999999999999742 23469999999999999999999999 99999999999999998
Q ss_pred -CCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCccccccccc
Q 040267 405 -DFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGN 458 (538)
Q Consensus 405 -~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 458 (538)
++.+||+|||+++... ..++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 8999999999996321 016889999999999999999999996422110
Q ss_pred HHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCC-CCHHHHHHHHHHhHHhc
Q 040267 459 LVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK-WSMYQVYISLCSIAEQL 524 (538)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~evl~~L~~i~~~~ 524 (538)
..+...+......+....+++ .|++.+|.+| |++.++.+.|+++.+..
T Consensus 293 ---------------~~~~~~~~~~~~~~~~~~~~~---~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ---------------CKPEGLFRRLPHLDMWNEFFH---VMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ---------------EEECSCCTTCSSHHHHHHHHH---HHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ---------------eeechhccccCcHHHHHHHHH---HHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 011111222233556666666 9999999998 68899999999887664
No 152
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=295.87 Aligned_cols=209 Identities=19% Similarity=0.281 Sum_probs=169.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCCc---------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNLE--------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni~--------- 338 (538)
..++|...+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++++++||||+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356788999999999999999994 5688999999975431 223577899999999999993
Q ss_pred --ccEEEeecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 --KPLVYKYMSNG-TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 --~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 35999999877 9999998765 59999999999999999999999 9999999999999999999999999999
Q ss_pred CcccCCC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 416 SRLTNGD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 416 a~~~~~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
++..... .+.++||||||+++|||++|+.||...... .
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------~ 237 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------V 237 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------T
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------H
Confidence 9754321 367889999999999999999999742110 0
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..... .....++++..+++ +||+.||++|||+.|+++.
T Consensus 238 ~~~~~---~~~~~~~~l~~li~---~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 EAAIH---PPYLVSKELMSLVS---GLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TTCCC---CSSCCCHHHHHHHH---HHTCSSGGGSCCHHHHHHC
T ss_pred hhccC---CCcccCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 00000 11123345555555 9999999999999999874
No 153
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=295.09 Aligned_cols=223 Identities=21% Similarity=0.279 Sum_probs=171.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCC-CCCCc------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLK-HPNLE------------------ 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~ni~------------------ 338 (538)
.+|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++.++. ||||+
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4678889999999999999995 468999999986433 33467889999999996 99993
Q ss_pred -ccEEEeecCCCCHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCCeEEEecc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
.++||||+. |+|.+++... ....+++.+++.++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 368999996 7999988752 22369999999999999999999999 77 9999999999999999999999999
Q ss_pred CCcccCC--------------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc
Q 040267 415 FSRLTNG--------------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK 456 (538)
Q Consensus 415 ~a~~~~~--------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~ 456 (538)
+++.... .++.++||||||+++|||+||+.||.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--- 260 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--- 260 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---
Confidence 9875321 14668999999999999999999997532210
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
... +... .. .....+..+. +++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 261 -----~~~-----~~~~----~~-~~~~~~~~~~---~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 261 -----IVN-----GKYS----IP-PHDTQYTVFH---SLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp ---------------CC----CC-TTCCSSGGGH---HHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred -----hhc-----Cccc----CC-cccccchHHH---HHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 000 0000 00 0111222344 4555999999999999999999999998765443
No 154
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.5e-35 Score=307.36 Aligned_cols=228 Identities=17% Similarity=0.176 Sum_probs=176.6
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC--------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-------- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-------- 337 (538)
.+.++....++|...++||+|+||.||+|+.. +++.||+|++++.. .....+.+|+.++..++||||
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 44566667889999999999999999999965 47899999996522 122348899999999999999
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchh
Confidence 3469999999999999998743 269999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC-----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 415 FSRLTNG-----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 415 ~a~~~~~-----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
+++.... .++.++|||||||++|||++|+.||......+... .+..+...
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~-~i~~~~~~ 299 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKER 299 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHTHHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH-hhhhcccc
Confidence 9964321 15678999999999999999999998643321110 01110000
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
-.+ +.. ....++++.++++ +|+..+|++ ||+++|+++.
T Consensus 300 ----~~~-----p~~-~~~~s~~~~dLi~---~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 ----FQF-----PTQ-VTDVSENAKDLIR---RLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ----CCC-----CSS-CCCSCHHHHHHHH---TTSSCGGGCTTTTTTHHHHTS
T ss_pred ----ccC-----Ccc-cccCCHHHHHHHH---HHhcccccccCCCCHHHHhCC
Confidence 000 000 0123456666666 999888888 9999999863
No 155
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3e-35 Score=296.18 Aligned_cols=224 Identities=21% Similarity=0.339 Sum_probs=172.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.++|...+.||+|+||.||+|+. .++..||||.+.... ....++.+|+.++++++|||| ..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35788889999999999999984 247789999996432 334678999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEE
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN-----TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIM 411 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 411 (538)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence 699999999999999987542 358999999999999999999999 99999999999999994 4569999
Q ss_pred eccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 412 DFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 412 Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
|||+++... ..++.++||||||+++|||+| |+.||...... .+...+
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~-- 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFV-- 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHH--
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHH--
Confidence 999886321 126889999999999999998 99999753221 111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. .+.... . ....+..+. +++.+||+.||.+|||+.||++.|+.+...
T Consensus 259 -~-~~~~~~-----~-~~~~~~~l~---~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 259 -T-SGGRMD-----P-PKNCPGPVY---RIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -H-TTCCCC-----C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -h-cCCCCC-----C-CCCCCHHHH---HHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1 111100 0 111233444 455599999999999999999999988764
No 156
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.5e-34 Score=288.70 Aligned_cols=216 Identities=16% Similarity=0.242 Sum_probs=170.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|... +|+.||+|.++... ...+++.+|+.++++++|||| ..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45888899999999999999954 68999999996432 135779999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999998754 68999999999999999999999 9999999999999999887 7999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+.... .++.++||||||+++|||++|+.||...... ........ ...
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~-~~~-- 235 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITS-VSY-- 235 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHT-TCC--
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHh-ccc--
Confidence 75432 1678999999999999999999999753321 11111111 100
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++.... ..+..+.++ +.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~-~~~~~~~~l---i~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFS-HTSELAKDF---IRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHT-TCCHHHHHH---HHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhc-ccCHHHHHH---HHHHcCCChhhCcCHHHHhc
Confidence 00111101 122344444 44999999999999999987
No 157
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1e-34 Score=299.71 Aligned_cols=233 Identities=16% Similarity=0.215 Sum_probs=173.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC--------CCCC------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK--------HPNL------------ 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--------H~ni------------ 337 (538)
.++|...+.||+|+||.||+|+. .+++.||||+++......+.+.+|+++++.++ |+||
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 36788999999999999999984 56889999999866555678899999999996 5666
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCC-------
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDF------- 406 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~------- 406 (538)
..++||||+ +|+|.+++.......+++..+..++.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhh
Confidence 236999999 5677777766544569999999999999999999999 7 999999999999999775
Q ss_pred ------------------------------------------CeEEEeccCCcccCC--------------------CCC
Q 040267 407 ------------------------------------------DARIMDFGFSRLTNG--------------------DAS 424 (538)
Q Consensus 407 ------------------------------------------~~kl~Dfg~a~~~~~--------------------~~~ 424 (538)
.+||+|||+++.... .++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 271 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN 271 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCC
Confidence 899999999974432 278
Q ss_pred CccCcccHHHHHHHHHhCCCCCCCCcccccccc-cHHHHHHHHhcc--------CC-----------ccccccccc----
Q 040267 425 LQKDVHGFGVVLLELVTGQKPFEINASEEGYKG-NLVNWIDQLSSS--------GR-----------IKDVIDKAL---- 480 (538)
Q Consensus 425 ~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~--------~~-----------~~~~~d~~l---- 480 (538)
.++|||||||++|||+||+.||......+.... .....+...... +. ...+.+...
T Consensus 272 ~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 1wak_A 272 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351 (397)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred cHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchh
Confidence 899999999999999999999986443221110 111111111000 00 000000000
Q ss_pred -----cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 -----TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 -----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...........+.+++.+||+.||++|||+.|+++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01223455566778888999999999999999985
No 158
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.5e-34 Score=284.66 Aligned_cols=218 Identities=18% Similarity=0.252 Sum_probs=170.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|++++++++|||| ..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788899999999999999995 4589999999975432 23568899999999999999 336999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999988765 59999999999999999999999 99999999999999986655 9999999986443
Q ss_pred C----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 G----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .++.++||||||+++|||++|+.||...... ....... .+... ...+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~-~~~~~-~~~~ 229 (284)
T 3kk8_A 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIK-AGAYD-YPSP 229 (284)
T ss_dssp SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCCC-CCTT
T ss_pred cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHH-hcccc-CCch
Confidence 2 1678999999999999999999999753321 1111111 11110 0000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.....+.++.++++ +|++.||++|||+.|+++.
T Consensus 230 --~~~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 --EWDTVTPEAKSLID---SMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --TTTTSCHHHHHHHH---HHSCSSTTTSCCHHHHTTS
T ss_pred --hhcccCHHHHHHHH---HHcccChhhCCCHHHHhcC
Confidence 01122344555555 9999999999999999873
No 159
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=297.64 Aligned_cols=214 Identities=15% Similarity=0.210 Sum_probs=165.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCC--CCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKH--PNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H--~ni-----------~~~lv~ 343 (538)
+.|...+.||+|+||.||++...+++.||||++..... ..+.+.+|++++.+++| +|| ..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 45788899999999999999988899999999865332 23678999999999986 888 346899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
| +.+|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||+++....
T Consensus 89 e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp C-CCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred e-CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 9 46789999998765 69999999999999999999999 9999999999999997 57899999999975421
Q ss_pred ----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 422 ----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 422 ----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
.++.++|||||||++|||++|+.||..... .........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~ 234 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAII 234 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHHHH
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHHHHh
Confidence 145689999999999999999999974221 111111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...... .. ....+.++.+ ++.+||+.||.+|||+.|+++.
T Consensus 235 ~~~~~~-----~~-~~~~~~~l~~---li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 DPNHEI-----EF-PDIPEKDLQD---VLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CTTSCC-----CC-CCCSCHHHHH---HHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCccc-----CC-cccCCHHHHH---HHHHHcCCChhHCCCHHHHHhC
Confidence 111000 00 1122334444 4459999999999999999864
No 160
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.5e-34 Score=301.09 Aligned_cols=220 Identities=20% Similarity=0.278 Sum_probs=168.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCCc--------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
...++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++||||+
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3457899999999999999999995 4689999999864321 112478999999999999993
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEec
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDF 413 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Df 413 (538)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeec
Confidence 369999999999999987665 69999999999999999999999 999999999999999754 45999999
Q ss_pred cCCcccCCC-------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 414 GFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 414 g~a~~~~~~-------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
|+++..... ++.++|||||||++|||++|+.||....... .+...+.
T Consensus 287 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~i~---- 358 (419)
T 3i6u_A 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQIT---- 358 (419)
T ss_dssp STTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHHHHH----
T ss_pred ccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHHHHh----
Confidence 999854321 4568999999999999999999997533211 1222111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.... . +... ...++.+ .+++.+||+.||++|||+.|+++
T Consensus 359 ~~~~~~-~-~~~~-~~~~~~~---~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 SGKYNF-I-PEVW-AEVSEKA---LDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TTCCCC-C-HHHH-TTSCHHH---HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCCCCC-C-chhh-cccCHHH---HHHHHHHccCChhHCcCHHHHhC
Confidence 111100 0 0000 1122344 44555999999999999999987
No 161
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=304.82 Aligned_cols=227 Identities=18% Similarity=0.183 Sum_probs=175.3
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni------- 337 (538)
+.+.+.....++|...+.||+|+||.||+|+.. +|+.||+|++++.. ...+.+.+|..++..++||||
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667889999999999999999999964 69999999996522 122448899999999999999
Q ss_pred ----cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 338 ----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 338 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
..|+||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeec
Confidence 3469999999999999998643 259999999999999999999999 99999999999999999999999999
Q ss_pred cCCcccCC-------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHH
Q 040267 414 GFSRLTNG-------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 414 g~a~~~~~-------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 462 (538)
|+++.... .++.++|||||||++|||++|+.||......+.
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-------- 278 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-------- 278 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH--------
Confidence 99864321 147789999999999999999999986433211
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCC---CCHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK---WSMYQVYI 515 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~evl~ 515 (538)
......... ...-+.. ....+.++.++++ +|+. +|.+| |+++||++
T Consensus 279 ~~~i~~~~~--~~~~p~~-~~~~s~~~~dli~---~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 YGKIVHYKE--HLSLPLV-DEGVPEEARDFIQ---RLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHTHHH--HCCCC-----CCCHHHHHHHH---TTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHhccc--CcCCCcc-ccCCCHHHHHHHH---HHcC-ChhhcCCCCCHHHHhc
Confidence 111111000 0000111 1123456666666 9999 99998 58988875
No 162
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.3e-34 Score=292.41 Aligned_cols=214 Identities=20% Similarity=0.269 Sum_probs=169.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|...+.||+|+||.||+|+.. +++.||+|.++.. ....+.+..|..++..+ +|||| ..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3467899999999999999999965 4889999999753 23456788999999988 79999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999998755 59999999999999999999999 999999999999999999999999999997531
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++|||||||++|||++|+.||...... ........ +..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~~----- 238 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIME-HNV----- 238 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC-----
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-CCC-----
Confidence 1 1678999999999999999999999853321 11122111 111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
.+ ....+.++..+++ +||+.||++||+ ++||++
T Consensus 239 -~~-p~~~s~~~~~li~---~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 -AY-PKSMSKEAVAICK---GLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -CC-CTTSCHHHHHHHH---HHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -CC-CCCCCHHHHHHHH---HHhhcCHHHcCCCCCCCHHHHhc
Confidence 01 1123345555555 999999999996 466654
No 163
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.3e-34 Score=291.33 Aligned_cols=216 Identities=20% Similarity=0.291 Sum_probs=162.1
Q ss_pred CCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e~~~~gsL 351 (538)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.++..++ |||| ..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 478999999999999964 6899999999653 3467889999999997 9999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEEeccCCcccCC-------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIMDFGFSRLTNG------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~------- 421 (538)
.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++....
T Consensus 94 ~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 168 (325)
T 3kn6_A 94 FERIKKKK--HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168 (325)
T ss_dssp HHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccc
Confidence 99998765 69999999999999999999999 9999999999999997665 799999999975422
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|||++|+.||........ .....+.... ...+.... ..... ...
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~-i~~~~~~~-~~~~~--~~~ 243 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKK-IKKGDFSF-EGEAW--KNV 243 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHH-HTTTCCCC-CSHHH--HTS
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHH-HHcCCCCC-Ccccc--cCC
Confidence 167889999999999999999999986432211 1112222222 11111100 00000 012
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
++++. +++.+||+.||++|||+.|+++
T Consensus 244 s~~~~---~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 244 SQEAK---DLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CHHHH---HHHHHHHCCCTTTCCCTTTSTT
T ss_pred CHHHH---HHHHHHCCCChhHCCCHHHHhc
Confidence 23444 4555999999999999999874
No 164
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=296.26 Aligned_cols=212 Identities=20% Similarity=0.296 Sum_probs=162.1
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
.+.||+|+||.||+|.. .+|+.||+|+++... ...+++.+|++++++++|||| ..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56799999999999995 569999999997643 345679999999999999999 33699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee--CCCCCeEEEeccCCcccCCC-------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV--DEDFDARIMDFGFSRLTNGD------- 422 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~------- 422 (538)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 174 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 174 FDRIIDES-YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp HHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 99987643 258999999999999999999999 999999999999999 67789999999999864321
Q ss_pred ---------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHH
Q 040267 423 ---------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDD 487 (538)
Q Consensus 423 ---------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 487 (538)
++.++|||||||++|||++|+.||...... .......... . ...+... ...++
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~-~-~~~~~~~--~~~~~ 317 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACR-W-DLEDEEF--QDISE 317 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTC-C-CSCSGGG--TTSCH
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcc-C-CCChhhh--ccCCH
Confidence 577899999999999999999999854321 1111111111 0 0001100 12234
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 488 EILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 488 ~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
++.++++ +||+.||.+|||+.|+++
T Consensus 318 ~~~~li~---~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 318 EAKEFIS---KLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHH---HHcCCChhhCCCHHHHhc
Confidence 5555555 999999999999999997
No 165
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.5e-34 Score=282.17 Aligned_cols=217 Identities=17% Similarity=0.238 Sum_probs=170.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc-cccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++|||| ..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 346888899999999999999964 5789999999753 3446789999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCCC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 422 (538)
+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999998755 58999999999999999999999 999999999999999 78899999999998754321
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++||||||+++|||++|+.||...... ....... .+... ......
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~-~~~~~~- 231 (277)
T 3f3z_A 163 KMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIR-EGTFT-FPEKDW- 231 (277)
T ss_dssp SCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCCC-CCHHHH-
T ss_pred cchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHH-hCCCC-CCchhh-
Confidence 578999999999999999999999753321 1111111 11110 000000
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++. +++.+|++.||++|||+.|+++
T Consensus 232 -~~~~~~~~---~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 232 -LNVSPQAE---SLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -TTSCHHHH---HHHHHHTCSSTTTSCCHHHHTT
T ss_pred -hcCCHHHH---HHHHHHccCChhhCcCHHHHhc
Confidence 01223444 4555999999999999999986
No 166
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.2e-35 Score=289.55 Aligned_cols=225 Identities=24% Similarity=0.358 Sum_probs=156.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..++|...+.||+|+||.||+|.. .+++.||||.+.... ...+++.+|+.++++++|||| ..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 356788999999999999999994 468999999986532 334678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 344 KYMSNGTLYSLLHSN------GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 344 e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998741 22369999999999999999999999 999999999999999999999999999875
Q ss_pred ccCC-----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 418 LTNG-----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 418 ~~~~-----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
.... .++.++||||||+++|||++|+.||....... .........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~- 243 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK-----VLMLTLQND- 243 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----HHHHHHTSS-
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh-----HHHHHhccC-
Confidence 4311 16889999999999999999999998643321 111110000
Q ss_pred cCCcc-ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIK-DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~-~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ...++.... ..+.++.+ ++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~---li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGVQDKEMLK-KYGKSFRK---MISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC-----CCCC-CCCHHHHH---HHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccccccccchhhh-hhhHHHHH---HHHHHccCChhhCcCHHHHhh
Confidence 00010 011111111 22334444 455999999999999999986
No 167
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.8e-34 Score=293.17 Aligned_cols=175 Identities=22% Similarity=0.271 Sum_probs=150.2
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc------------cHHHHHHHHHHHhcCCCCCCc
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL------------GEKQFLLEMKQVGLLKHPNLE 338 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~H~ni~ 338 (538)
.+.++....++|...+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45688889999999999999999999999987899999999864221 126789999999999999992
Q ss_pred ----------------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 339 ----------------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 339 ----------------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
.++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEE
Confidence 269999998 68988887554 369999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccC-----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 403 DEDFDARIMDFGFSRLTN-----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~-----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.++.+||+|||+++... ..++.++|||||||++|||++|+.||....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999997322 126788999999999999999999998643
No 168
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-35 Score=289.27 Aligned_cols=219 Identities=21% Similarity=0.323 Sum_probs=171.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-------------ccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------~~l 341 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||. .++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457888899999999999999964 68999999997533 2345689999999999999992 369
Q ss_pred EEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----ccccCCCCCCeeeCCCCCeEEEecc
Q 040267 342 VYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPP-----CLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997532 2359999999999999999999999 77 9999999999999999999999999
Q ss_pred CCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 415 FSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 415 ~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
+++.... .++.++||||||+++|||++|+.||...... .+... ...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~----i~~~~ 232 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGK----IREGK 232 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH----HHHTC
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-----HHHHH----Hhhcc
Confidence 9875432 1678899999999999999999999853221 11111 11121
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
... +. ...++++.+++. +||+.||++|||+.||++.+.
T Consensus 233 ~~~-----~~-~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 233 FRR-----IP-YRYSDELNEIIT---RMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCC-----CC-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHTSTT
T ss_pred ccc-----CC-cccCHHHHHHHH---HHcCCCcccCCCHHHHHhChh
Confidence 111 11 122344455555 999999999999999987654
No 169
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.6e-35 Score=291.13 Aligned_cols=223 Identities=20% Similarity=0.273 Sum_probs=166.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--CCC--EEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--DGS--MLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
++|...+.||+|+||.||+|... +++ .||+|.++... ...+++.+|++++++++|||| ..++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 97 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence 46788899999999999999852 333 68999987532 234678999999999999999 3359
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+||+++|+|.+++.... ..+++..+.+++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 98 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999998643 258999999999999999999999 9999999999999999999999999999875432
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. ++.++||||||+++|||++ |+.||..... ..............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKEGERL- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTSCCCC-
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHccCCCC-
Confidence 1 4668999999999999999 9999975332 11222221111100
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. .....+.++ .+++.+||+.||++|||+.++++.|+++...
T Consensus 245 ----~-~~~~~~~~l---~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 ----P-RPEDCPQDI---YNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ----C-CCTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ----C-CCcCcCHHH---HHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0 011223344 4455599999999999999999999987654
No 170
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-34 Score=292.34 Aligned_cols=227 Identities=19% Similarity=0.288 Sum_probs=164.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+++++.++||||+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35688889999999999999995 569999999996432 2246688999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.|+||||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 27999999 78999999874 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH-------HHHHHHHhcc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL-------VNWIDQLSSS 469 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~ 469 (538)
.... .++.++||||+||++|||++|+.||......+.....+ ..+... ...
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~-~~~ 255 (367)
T 1cm8_A 177 QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR-LQS 255 (367)
T ss_dssp ECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT-CSC
T ss_pred ccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH-hhh
Confidence 5432 27889999999999999999999998643321100000 000000 000
Q ss_pred CC-------cccccccccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 470 GR-------IKDVIDKALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 470 ~~-------~~~~~d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. +.......+. ....+.++.++++ +|++.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~---~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH---HHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH---HHccCChhHCCCHHHHhcC
Confidence 00 0000000000 0112344555555 9999999999999999873
No 171
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.5e-34 Score=280.54 Aligned_cols=224 Identities=17% Similarity=0.273 Sum_probs=174.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|... +++.||+|.++... ...+.+.+|++++++++|||| ..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45788899999999999999965 68999999986432 135789999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+||||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999997654 59999999999999999999999 9999999999999999877 8999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
..... .++.++||||||+++|||++|+.||...... ....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~- 229 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTNIS-AVNYD- 229 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHH-TTCCC-
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHHhH-hcccC-
Confidence 75432 2678999999999999999999999753321 1111111 11100
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHHHhHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI--SLCSIAEQ 523 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~~i~~~ 523 (538)
.+.... ...++.+. +++.+||+.||++|||+.|+++ .++++..+
T Consensus 230 -~~~~~~-~~~~~~~~---~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 230 -FDEEYF-SNTSELAK---DFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp -CCHHHH-TTCCHHHH---HHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred -Ccchhc-ccCCHHHH---HHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 000000 11223444 4555999999999999999997 46665544
No 172
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.9e-35 Score=299.53 Aligned_cols=214 Identities=15% Similarity=0.203 Sum_probs=165.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC--CCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK--HPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--H~ni-----------~~~lv~ 343 (538)
.+|...+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++.+++ |||| ..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3588889999999999999998789999999996533 23467899999999996 5998 236899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
| +.+|+|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56789999998765 68999999999999999999999 9999999999999996 57999999999975421
Q ss_pred ----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 422 ----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 422 ----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
.++.++|||||||++|||++|+.||..... ....+....
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~~~ 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAII 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHHHh
Confidence 146689999999999999999999975321 111122222
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..... ... ....+.++.++ +.+||+.||++|||+.|+++.
T Consensus 282 ~~~~~-----~~~-~~~~~~~~~~l---i~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 DPNHE-----IEF-PDIPEKDLQDV---LKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CTTSC-----CCC-CCCSCHHHHHH---HHHHTCSSTTTSCCHHHHHTS
T ss_pred Ccccc-----CCC-CccchHHHHHH---HHHHcccChhhCCCHHHHhhC
Confidence 11110 000 11223344444 449999999999999999864
No 173
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.6e-34 Score=307.28 Aligned_cols=220 Identities=20% Similarity=0.237 Sum_probs=174.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...++||+|+||.||+|... +|+.||+|++... ......+.+|++++++++|||| ..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999964 6999999999643 2345668899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
|||+++|+|.+++...+...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999987665569999999999999999999999 99999999999999999999999999999865321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++|||||||++|||++|+.||....... ...... ....... ..+
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~-~~i~~~~------~~~ 408 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVE-RLVKEVP------EEY 408 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHH-HHHHHCC------CCC
T ss_pred ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHH-HHhhccc------ccC
Confidence 6788999999999999999999998643211 111111 1111110 011
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
....+.++..+++ +||+.||.+|| ++.||++.
T Consensus 409 -p~~~s~~~~dLI~---~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 -SERFSPQARSLCS---QLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -CccCCHHHHHHHH---HhccCCHHHcCCCCCCCHHHHHhC
Confidence 1223445566665 99999999999 78888753
No 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.3e-34 Score=288.02 Aligned_cols=225 Identities=18% Similarity=0.205 Sum_probs=166.8
Q ss_pred cCCCC-CCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEe
Q 040267 280 SNFSA-QNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~-~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e 344 (538)
+.|.. .+.||+|+||.||+|. ..+++.||||+++... ...+.+.+|++++.++ +|||| ..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45666 4789999999999999 4579999999997543 3467899999999985 79999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~~ 421 (538)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++.....
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998754 58999999999999999999999 99999999999999998766 99999999874320
Q ss_pred -----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccc------cHH
Q 040267 422 -----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG------NLV 460 (538)
Q Consensus 422 -----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~------~~~ 460 (538)
.++.++|||||||++|||++|+.||......+.... ...
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 046789999999999999999999986443221100 000
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+......+... ...... ...+.++. +++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~i~~~~~~-~~~~~~--~~~~~~~~---~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 247 NMLFESIQEGKYE-FPDKDW--AHISCAAK---DLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHCCCC-CCHHHH--TTSCHHHH---HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhccCcc-cCchhc--ccCCHHHH---HHHHHHhhCChhhCCCHHHHhc
Confidence 0111111111110 000000 11223444 4555999999999999999987
No 175
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.9e-34 Score=302.49 Aligned_cols=164 Identities=22% Similarity=0.265 Sum_probs=139.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|+.+++.++||||+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 45788899999999999999984 468999999997532 2346788999999999999992
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 2799999976 57776653 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||.+..
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 17889999999999999999999998643
No 176
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-34 Score=292.10 Aligned_cols=224 Identities=17% Similarity=0.182 Sum_probs=169.6
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc------cccHHHHHHHHHHHhcCCCCCCc--------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC------KLGEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
++....++|...+.||+|+||.||+|.. .++..||+|.+... ....+.+.+|++++++++||||+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3445667899999999999999999995 46889999998643 23346799999999999999993
Q ss_pred ---ccEEEeecCCCCHHHHhhcCC--------------------------------------CCCCCHHHHHHHHHHHHH
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNG--------------------------------------NTALDWPSRLRIGLGAAR 377 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~ia~ 377 (538)
.++||||+++|+|.+++.... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 369999999999999985210 112356778899999999
Q ss_pred HHHHHhcCCCCCccccCCCCCCeeeCCCC--CeEEEeccCCcccC-----------------------------CCCCCc
Q 040267 378 GLSWLHHCCHPPCLHQNISSSVILVDEDF--DARIMDFGFSRLTN-----------------------------GDASLQ 426 (538)
Q Consensus 378 ~L~yLH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~-----------------------------~~~~~~ 426 (538)
||+|||+ .+|+||||||+||+++.++ .+||+|||+++... ..++.+
T Consensus 180 ~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 9999999 9999999999999998776 89999999987421 126779
Q ss_pred cCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC
Q 040267 427 KDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE 506 (538)
Q Consensus 427 ~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~ 506 (538)
+||||||+++|||++|+.||...... ........... ....+.. ...+.++.++++ +||+.||++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~--~~~~~~~--~~~~~~~~~li~---~~l~~~p~~ 321 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKL--CFENPNY--NVLSPLARDLLS---NLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC--CTTSGGG--GGSCHHHHHHHH---HHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhccc--ccCCccc--ccCCHHHHHHHH---HHcCCChhH
Confidence 99999999999999999999754321 11111111110 0000100 012334455555 999999999
Q ss_pred CCCHHHHHH
Q 040267 507 KWSMYQVYI 515 (538)
Q Consensus 507 RPs~~evl~ 515 (538)
|||+.|+++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999987
No 177
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-35 Score=297.68 Aligned_cols=218 Identities=18% Similarity=0.241 Sum_probs=170.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
.++|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++.++ +||||
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999996 368999999997532 2345677899999999 69999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 3359999999999999998755 59999999999999999999999 999999999999999999999999999987
Q ss_pred ccCC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 418 LTNG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 418 ~~~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.... .++.++|||||||++|||++|+.||...... ..............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSE- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCC-
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhccC-
Confidence 4311 1567899999999999999999999753321 12222222221110
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
+... ...+..+.+ ++.+||+.||.+|| |+.|+++.
T Consensus 283 ------~~~~-~~~~~~~~~---li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 ------PPYP-QEMSALAKD---LIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CCCC-TTSCHHHHH---HHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CCCC-cccCHHHHH---HHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1111 112334444 44599999999999 99999875
No 178
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.5e-34 Score=300.44 Aligned_cols=158 Identities=19% Similarity=0.299 Sum_probs=129.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++++++||||+
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36799999999999999999985 468999999996532 2346788999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeccc-cchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 379999985 69999998754 69999999999999999999999 9999999999999999999999999999975
Q ss_pred cC---------------------------------------------------CCCCCccCcccHHHHHHHHHhC
Q 040267 419 TN---------------------------------------------------GDASLQKDVHGFGVVLLELVTG 442 (538)
Q Consensus 419 ~~---------------------------------------------------~~~~~~~DV~S~Gvvl~elltg 442 (538)
.. ..++.++|||||||++|||+||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32 1178899999999999999993
No 179
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.3e-34 Score=282.42 Aligned_cols=225 Identities=19% Similarity=0.292 Sum_probs=168.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++|||| ..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56888899999999999999964 68999999997533 223678899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|++ |+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 998 699999987755568999999999999999999999 9999999999999999999999999998764221
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC--cccc---
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR--IKDV--- 475 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 475 (538)
.++.++||||||+++|||+||+.||......+ .+............ +...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID----QLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGS
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHHHhCCCchhhhhHhhcC
Confidence 15788999999999999999999998643221 11111111110000 0000
Q ss_pred --cccccc----C------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 --IDKALT----G------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 --~d~~l~----~------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+... . ...++++.+ ++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRS---LLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHH---HHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHH---HHHHhcCcCcccCCCHHHHhc
Confidence 000000 0 112234444 455999999999999999986
No 180
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.7e-34 Score=291.19 Aligned_cols=232 Identities=18% Similarity=0.242 Sum_probs=168.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++|||| ..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46778899999999999999964 589999999865332 23557899999999999999 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999998876554 59999999999999999999999 9999999999999999999999999999864321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH-------HHHHHHHhccCCcc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL-------VNWIDQLSSSGRIK 473 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 473 (538)
.++.++||||||+++|||++|+.||......+...... ..+...........
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 26788999999999999999999998644321110000 00000000000011
Q ss_pred ccccccccCCCcH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 474 DVIDKALTGKGYD-----DEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 474 ~~~d~~l~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.+...... .....+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111100 112334555559999999999999999863
No 181
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.5e-35 Score=285.15 Aligned_cols=216 Identities=19% Similarity=0.280 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++.++|||| ..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356888899999999999999964 68999999986433 334678999999999999999 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+.....
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999997654 58999999999999999999999 9999999999999999999999999999864310
Q ss_pred ----------------------C-CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 ----------------------D-ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ----------------------~-~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .+.++||||||+++|||++|+.||....... .....|.. .... ..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~----~~~~---~~~ 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKE----KKTY---LNP 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS---HHHHHHHT----TCTT---STT
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHhhh----cccc---cCc
Confidence 0 3568999999999999999999997543211 11122211 1000 000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+..+.+ ++.+||+.||++|||+.|+++
T Consensus 231 ---~~~~~~~~~~---li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ---WKKIDSAPLA---LLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ---GGGSCHHHHH---HHHHHSCSSTTTSCCHHHHTT
T ss_pred ---hhhcCHHHHH---HHHHHCCCCchhCCCHHHHhc
Confidence 0112334444 445999999999999999876
No 182
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=280.09 Aligned_cols=215 Identities=20% Similarity=0.274 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-------------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-------------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-------------~~ 339 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.++... ...+.+.+|++++++++|||| ..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46799999999999999999995 468999999997532 234679999999999999999 23
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||+++| |.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 6999999876 8888876555579999999999999999999999 99999999999999999999999999999754
Q ss_pred CCC---------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 420 NGD---------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 420 ~~~---------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
... .+.++||||||+++|||++|+.||..... ........ .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~-~~~~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIG-KGSY 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHH-HCCC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHh-cCCC
Confidence 310 25689999999999999999999985322 11111111 1111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+.. ..+..+.++++ +||+.||++|||+.|+++.
T Consensus 231 ------~~~~-~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ------AIPG-DCGPPLSDLLK---GMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ------CCCS-SSCHHHHHHHH---HHTCSSTTTSCCHHHHHHS
T ss_pred ------CCCC-ccCHHHHHHHH---HHccCChhhCCCHHHHhcC
Confidence 1111 12334444444 9999999999999999974
No 183
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.2e-34 Score=288.33 Aligned_cols=214 Identities=18% Similarity=0.302 Sum_probs=170.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+.|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.++++++|||| ..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4577889999999999999985 468999999996432 345789999999999999999 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 9999999999754 59999999999999999999999 9999999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... .....+ ..... +.+..
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~----~~~~~-----~~~~~ 241 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLI----PKNNP-----PTLEG 241 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHH----HHSCC-----CCCCS
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHh----hcCCC-----CCCcc
Confidence 1578999999999999999999999753221 111111 11111 11111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
..+..+..++ .+||+.||++|||+.|+++..
T Consensus 242 -~~~~~l~~li---~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 -NYSKPLKEFV---EACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -SCCHHHHHHH---HHHCCSSGGGSCCHHHHTTCH
T ss_pred -ccCHHHHHHH---HHHcCCChhhCcCHHHHhhCh
Confidence 2233444444 499999999999999998753
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-34 Score=288.51 Aligned_cols=229 Identities=21% Similarity=0.301 Sum_probs=164.7
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc------HHHHHHHHHHHhcCCCCCC-----------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG------EKQFLLEMKQVGLLKHPNL----------- 337 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~H~ni----------- 337 (538)
....++|...+.||+|+||.||+|.. .+|+.||||.++..... .+.+.+|++++++++||||
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 34456899999999999999999995 46899999999743211 2468899999999999999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred ceEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 34699999986 8999887654 368999999999999999999999 999999999999999999999999999987
Q ss_pred ccCC------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc--cCC
Q 040267 418 LTNG------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--SGR 471 (538)
Q Consensus 418 ~~~~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 471 (538)
.... .++.++|||||||++|||++|..||......+ .+......... ...
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~----~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD----QLTRIFETLGTPTEEQ 236 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCTTT
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHcCCCChhh
Confidence 5421 15678999999999999999999997643221 11111111100 001
Q ss_pred cccc---ccc----cccC-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 472 IKDV---IDK----ALTG-------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 472 ~~~~---~d~----~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.+. .+. .... ...++++ .+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDL---LDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHH---HHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHH---HHHHHHHhccChhhCCCHHHHhcC
Confidence 1100 000 0000 1112344 445559999999999999999874
No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.8e-34 Score=289.15 Aligned_cols=159 Identities=17% Similarity=0.301 Sum_probs=141.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC-------------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL-------------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni-------------~~~lv~e 344 (538)
++|...+.||+|+||.||+|.. .+++.||||.++.. ..+.+.+|++++++++ |||| ..++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 5688889999999999999984 57899999999743 3577999999999997 9999 2369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTNG-- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~-- 421 (538)
|+++++|.+++.. +++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 114 HVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 9999999999863 8899999999999999999999 9999999999999999776 899999999975331
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
.++.++|||||||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 167899999999999999999999964
No 186
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.8e-34 Score=279.35 Aligned_cols=213 Identities=19% Similarity=0.332 Sum_probs=170.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.+++.++|||| ..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46888899999999999999965 69999999986432 334678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999998765 58999999999999999999999 99999999999999999999999999998754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++||||||+++|||++|+.||..... ....... ..+.. .+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~------~~ 230 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKI-RGGVF------YI 230 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH-HHCCC------CC
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHh-hcCcc------cC
Confidence 25689999999999999999999975322 1111111 11110 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++..+ +.+|++.||++|||+.|+++.
T Consensus 231 -~~~~~~~l~~l---i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 -PEYLNRSVATL---LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -CTTSCHHHHHH---HHHHTCSSGGGSCCHHHHHHS
T ss_pred -chhcCHHHHHH---HHHHccCChhhCCCHHHHHhC
Confidence 11223344444 449999999999999999874
No 187
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.6e-34 Score=300.80 Aligned_cols=214 Identities=21% Similarity=0.273 Sum_probs=162.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|.. .+|+.||||.++.. ......+.+|+++++.++|||| ..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45788899999999999999995 56899999999743 2233567889999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999998755 69999999999999999999995 26899999999999999999999999999975321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||++|+.||...... ........ ... .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~-~~~------~ 367 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILM-EEI------R 367 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC------C
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHh-CCC------C
Confidence 1788999999999999999999999753321 11111111 111 0
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
+ ....+.++.+++. +||+.||++|| |+.|+++
T Consensus 368 ~-p~~~~~~~~~li~---~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 F-PRTLGPEAKSLLS---GLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C-CTTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C-CccCCHHHHHHHH---HHcccCHHHhCCCCCCCHHHHHh
Confidence 1 1122345555555 99999999999 9999986
No 188
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.8e-34 Score=293.74 Aligned_cols=166 Identities=21% Similarity=0.336 Sum_probs=137.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC-CCCC-------------cc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK-HPNL-------------EK 339 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-H~ni-------------~~ 339 (538)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+.++.++. |||| ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 356788999999999999999995 568999999986432 33456889999999997 9999 23
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 79999998 5999999874 48999999999999999999999 99999999999999999999999999999743
Q ss_pred C---------------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 420 N---------------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 420 ~---------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. ..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 127889999999999999999999998643
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=290.63 Aligned_cols=223 Identities=20% Similarity=0.314 Sum_probs=167.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc--HHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG--EKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|... +++.||+|+++..... ...+.+|++++++++|||| ..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46788899999999999999964 6899999999753321 1245679999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
++ |+|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 97 59999988754 368999999999999999999999 999999999999999999999999999986432
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCccccccc
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKDVIDK 478 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~ 478 (538)
..++.++|||||||++|||++|+.||......+ ....+...... ..+......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-----QLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHhCCCChHhchhhhcc
Confidence 126889999999999999999999998643321 11222111111 011111100
Q ss_pred ---------ccc-------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ---------ALT-------GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ---------~l~-------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
... ....+.++. +++.+|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGA---DLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHH---HHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHH---HHHHHHcCcCcccCCCHHHHhc
Confidence 000 011223444 4555999999999999999987
No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.1e-33 Score=289.13 Aligned_cols=222 Identities=18% Similarity=0.281 Sum_probs=172.0
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---------cHHHHHHHHHHHhcC-CCCCC-----
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---------GEKQFLLEMKQVGLL-KHPNL----- 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l-~H~ni----- 337 (538)
......++|...+.||+|+||.||+|... +|+.||||+++.... ..+.+.+|+.++.++ +||||
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445667999999999999999999974 699999999864321 135678999999999 79999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEE
Confidence 3469999999999999998654 59999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 412 DFGFSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 412 Dfg~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|||++..... .++.++|||||||++|||++|+.||...... .. .
T Consensus 243 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-----~~---~ 314 (365)
T 2y7j_A 243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-----LM---L 314 (365)
T ss_dssp CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH---H
T ss_pred ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-----HH---H
Confidence 9999875432 1467899999999999999999999753221 11 1
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.. ...+... ...+.. ...+..+. +++.+||+.||++|||+.|+++
T Consensus 315 ~~-i~~~~~~-~~~~~~--~~~~~~~~---~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 RM-IMEGQYQ-FSSPEW--DDRSSTVK---DLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH-HHHTCCC-CCHHHH--SSSCHHHH---HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HH-HHhCCCC-CCCccc--ccCCHHHH---HHHHHHcCCChhHCcCHHHHhc
Confidence 11 1111110 000000 11223344 4555999999999999999986
No 191
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.5e-34 Score=293.38 Aligned_cols=166 Identities=22% Similarity=0.340 Sum_probs=145.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|... ++..||+|.++... ...+.+.+|++++++++|||| ..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46888899999999999999964 68999999997542 234678999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTN---- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~---- 420 (538)
+++|+|.+++...+ .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999998765 58999999999999999999998 6 89999999999999999999999999986321
Q ss_pred -----------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 -----------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 -----------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
..++.++||||||+++|||++|+.||....
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 127889999999999999999999997543
No 192
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=9.2e-35 Score=286.31 Aligned_cols=213 Identities=18% Similarity=0.255 Sum_probs=166.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc---cccHHHHHHHHHHHhcC-CCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC---KLGEKQFLLEMKQVGLL-KHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|... +++.||+|.++.. .....++.+|+..+..+ +|||| ..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999965 7999999999753 23356788999999999 89999 33589
Q ss_pred EeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------------
Q 040267 343 YKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------------- 404 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------------- 404 (538)
|||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999998642 1368999999999999999999999 99999999999999984
Q ss_pred ---CCCeEEEeccCCcccCCC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHH
Q 040267 405 ---DFDARIMDFGFSRLTNGD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461 (538)
Q Consensus 405 ---~~~~kl~Dfg~a~~~~~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 461 (538)
...+||+|||.+...... ++.++||||||+++|||++|..|+.... ...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~ 238 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------QWH 238 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------HHH
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------HHH
Confidence 447999999998765421 4468999999999999999998765321 111
Q ss_pred HHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ...+... .+. ...+.++.++++ +||+.||++|||+.|+++
T Consensus 239 ---~-~~~~~~~-----~~~-~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 239 ---E-IRQGRLP-----RIP-QVLSQEFTELLK---VMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---H-HHTTCCC-----CCS-SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ---H-HHcCCCC-----CCC-cccCHHHHHHHH---HHhCCCcccCCCHHHHhh
Confidence 1 1111111 111 122345555555 999999999999999975
No 193
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-34 Score=315.74 Aligned_cols=225 Identities=21% Similarity=0.339 Sum_probs=177.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
..++|...+.||+|+||.||+|.... +..||+|.++... ...+.+.+|+.++++++|||| ..++
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~l 467 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEE
Confidence 34567888999999999999998632 4579999987533 234679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999998654 358999999999999999999999 9999999999999999999999999999986532
Q ss_pred C------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 D------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ~------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
. ++.++||||||+++|||++ |..||...... .+...+ .. +....
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i---~~-~~~~~-- 612 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRI---EN-GERLP-- 612 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHH---HH-TCCCC--
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHH---Hc-CCCCC--
Confidence 1 6778999999999999997 99999753321 111111 11 11000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. ....+..+. +++.+||+.||++|||+.||++.|+++.++.
T Consensus 613 ---~-~~~~~~~l~---~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ---M-PPNCPPTLY---SLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ---C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---C-CccccHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1 111233444 4555999999999999999999999987653
No 194
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.5e-34 Score=298.29 Aligned_cols=168 Identities=20% Similarity=0.247 Sum_probs=145.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC------CCCCC-----------ccc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL------KHPNL-----------EKP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l------~H~ni-----------~~~ 340 (538)
..+|...+.||+|+||.||+|.. .+++.||||+++......+++.+|+++++.+ .|+|| ..+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 34688889999999999999985 4588999999987655556788899888887 45677 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--eEEEeccCCcc
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--ARIMDFGFSRL 418 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 418 (538)
+||||+. |+|.+++.......+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 699999988765569999999999999999999999 99999999999999999887 99999999865
Q ss_pred cCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
... .++.++|||||||++|||+||+.||....
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 252 EHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 432 17889999999999999999999998644
No 195
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.5e-34 Score=288.70 Aligned_cols=168 Identities=20% Similarity=0.283 Sum_probs=140.6
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------ccE
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-----------KPL 341 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-----------~~l 341 (538)
...++|...+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++||||+ .++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 4456799999999999999999984 4689999999975432 235678999999999999993 369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee-----CCCCCeEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV-----DEDFDARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~Dfg~a 416 (538)
||||++ |+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+||+|||++
T Consensus 111 v~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999998 59999998766 59999999999999999999999 999999999999999 45556999999998
Q ss_pred cccC------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 417 RLTN------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 417 ~~~~------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+... ..++.++|||||||++|||++|+.||....
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 242 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence 6432 116889999999999999999999997643
No 196
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8e-34 Score=279.72 Aligned_cols=213 Identities=21% Similarity=0.282 Sum_probs=170.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++|||| ..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999964 57899999986432 234678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998765 58999999999999999999999 9999999999999999999999999998864322
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... ........ .. ..+.
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~-~~------~~~~- 232 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVN-VD------LKFP- 232 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHT-TC------CCCC-
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhc-cc------cCCC-
Confidence 1678999999999999999999999753221 11111111 11 0111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.++.++++ +|++.||.+|||+.|+++.
T Consensus 233 ~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 233 PFLSDGSKDLIS---KLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp TTSCHHHHHHHH---HHSCSSGGGSCCHHHHHTC
T ss_pred CcCCHHHHHHHH---HHhhcCHhhCCCHHHHhhC
Confidence 122345555555 9999999999999999863
No 197
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.6e-34 Score=293.11 Aligned_cols=214 Identities=20% Similarity=0.257 Sum_probs=161.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHH-HhcCCCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQ-VGLLKHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~-l~~l~H~ni-----------~~~l 341 (538)
.++|...+.||+|+||.||+|+.. +++.||+|++++.. .....+.+|..+ ++.++|||| ..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357888999999999999999964 58899999997543 223456677776 577899999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999998755 58999999999999999999999 9999999999999999999999999999975211
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||...... +....... +..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~~------ 256 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILN-KPL------ 256 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHH-SCC------
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-ccc------
Confidence 1678999999999999999999999754321 11111111 111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+ ....+.++..+++ +||+.||.+||++.+.++.
T Consensus 257 ~~-~~~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 257 QL-KPNITNSARHLLE---GLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CC-CSSSCHHHHHHHH---HHTCSSGGGSTTTTTTHHH
T ss_pred CC-CCCCCHHHHHHHH---HHcccCHHhCCCCCCCHHH
Confidence 01 1123345555555 9999999999998644433
No 198
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.3e-34 Score=301.66 Aligned_cols=217 Identities=22% Similarity=0.294 Sum_probs=171.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||++... ....+.+.+|++++++++||||+ .++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46888899999999999999964 7899999998643 23467899999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 106 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp CCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999998765 59999999999999999999999 999999999999999 467899999999987543
Q ss_pred C---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 G---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .++.++||||+||++|||++|+.||...... .+...+ ..+..... .+.
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i----~~~~~~~~-~~~ 250 (484)
T 3nyv_A 181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY-----DILKKV----EKGKYTFE-LPQ 250 (484)
T ss_dssp CCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH----HHCCCCCC-SGG
T ss_pred cccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHH----HcCCCCCC-Ccc
Confidence 2 1788999999999999999999999864321 111111 11111100 000
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...++++..+++ +||+.||++|||+.|+++.
T Consensus 251 ~--~~~s~~~~~li~---~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 251 W--KKVSESAKDLIR---KMLTYVPSMRISARDALDH 282 (484)
T ss_dssp G--GGSCHHHHHHHH---HHTCSSGGGSCCHHHHHTS
T ss_pred c--ccCCHHHHHHHH---HHCCCChhHCcCHHHHhhC
Confidence 0 112345555555 9999999999999999863
No 199
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=282.32 Aligned_cols=216 Identities=19% Similarity=0.245 Sum_probs=165.6
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeecC
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~~ 347 (538)
.|....+||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++.++||||+ .++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345556999999999999995 568899999997543 3356799999999999999993 359999999
Q ss_pred CCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCCC---
Q 040267 348 NGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~--- 422 (538)
+++|.+++.... ...+++..+..++.|++.||+|||+ .+|+|+||||+||+++. ++.+||+|||++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 999999998753 3357789999999999999999999 99999999999999987 899999999998754320
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||||+++|||++|+.||....... ......... . ..+.+
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~-----~~~~~ 247 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ------AAMFKVGMF-K-----VHPEI 247 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH------HHHHHHHHH-C-----CCCCC
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh------HHHHhhccc-c-----ccccc
Confidence 5678999999999999999999997422110 011110000 0 01111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ...+.++..++ .+||+.||++|||+.|+++
T Consensus 248 ~-~~~~~~~~~li---~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 P-ESMSAEAKAFI---LKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp C-TTSCHHHHHHH---HHTTCSSTTTSCCHHHHHT
T ss_pred c-ccCCHHHHHHH---HHHccCChhhCCCHHHHhc
Confidence 1 12233444444 4999999999999999975
No 200
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.4e-34 Score=302.23 Aligned_cols=219 Identities=21% Similarity=0.262 Sum_probs=169.4
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--------------ccHHHHHHHHHHHhcCCCCCC-----
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--------------LGEKQFLLEMKQVGLLKHPNL----- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~H~ni----- 337 (538)
..++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++||||
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3567889999999999999999954 58899999996532 234678999999999999999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---Ce
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DA 408 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~ 408 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccE
Confidence 3469999999999999997755 59999999999999999999999 9999999999999998775 69
Q ss_pred EEEeccCCcccCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 409 RIMDFGFSRLTNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 409 kl~Dfg~a~~~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
||+|||+++..... ++.++||||+||++|||++|+.||...... ......
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i- 259 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIKKV- 259 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-
Confidence 99999999754321 678999999999999999999999864321 111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+.... +... ....+.++.++++ +|++.||.+|||+.|+++.
T Consensus 260 ~~~~~~~--~~~~-~~~~s~~~~~li~---~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYF--DFND-WKNISDEAKELIK---LMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCC--CHHH-HTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCC--Cccc-cCCCCHHHHHHHH---HHcCCChhHCCCHHHHhcC
Confidence 1111100 0000 0112344555555 9999999999999999863
No 201
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.6e-34 Score=285.69 Aligned_cols=218 Identities=20% Similarity=0.278 Sum_probs=167.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCC----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNL----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni----------~ 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++|||| .
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35688889999999999999995 4588999999864321 12348899999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccC
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGF 415 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 415 (538)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 469999999999999997654 69999999999999999999999 99999999999999987654 99999999
Q ss_pred CcccCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC
Q 040267 416 SRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG 470 (538)
Q Consensus 416 a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (538)
++.... .++.++||||||+++|||++|+.||....... .+...+.. +
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~----~ 235 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITS----G 235 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHHHHH----T
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHHHHh----C
Confidence 975432 26779999999999999999999997543221 22222211 1
Q ss_pred CccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 471 RIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 471 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... .+.... ..++. +.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~--~~~~~~-~~~~~---~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYNF--IPEVWA-EVSEK---ALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCC--CHHHHT-TSCHH---HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccc--Cchhhh-hcCHH---HHHHHHHHcccCHhhCCCHHHHhh
Confidence 1100 000001 12234 444555999999999999999985
No 202
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-33 Score=290.39 Aligned_cols=171 Identities=21% Similarity=0.262 Sum_probs=144.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCC-----C-----------cc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPN-----L-----------EK 339 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~n-----i-----------~~ 339 (538)
..++|...+.||+|+||.||+|... +++.||||+++.......++..|++++..++ |++ + ..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 3568899999999999999999954 6889999999865555567888999999885 665 3 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC--CCCCeEEEeccCCc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--EDFDARIMDFGFSR 417 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~ 417 (538)
++||||++ |+|.+++.......+++..+..++.|++.||+|||+ ...+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 69999996 599999987754569999999999999999999994 127899999999999994 57889999999997
Q ss_pred ccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 27889999999999999999999998643
No 203
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.8e-34 Score=289.09 Aligned_cols=218 Identities=18% Similarity=0.265 Sum_probs=166.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... +++.||||.++.... ...+|++++.++ +|||| ..|+||||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 456888899999999999999964 688999999975432 245688888888 79999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC----CCeEEEeccCCcccCC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED----FDARIMDFGFSRLTNG 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~ 421 (538)
+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+|||+++....
T Consensus 98 ~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 98 MKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 99999999998765 69999999999999999999999 999999999999998543 3599999999985432
Q ss_pred C-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 D-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. ++.++|||||||++|||++|+.||...... ...+.... +..+.... ..
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~-i~~~~~~~--~~ 244 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILAR-IGSGKFSL--SG 244 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHH-HHHCCCCC--CS
T ss_pred CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHH-HccCCccc--Cc
Confidence 1 556899999999999999999999753211 11122222 11121110 00
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. ....++++.++++ +||+.||++|||+.|+++.
T Consensus 245 ~~-~~~~s~~~~~li~---~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 GY-WNSVSDTAKDLVS---KMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TT-TTTSCHHHHHHHH---HHTCSSTTTSCCHHHHTTS
T ss_pred cc-cccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 00 1123445555555 9999999999999999864
No 204
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.4e-34 Score=286.54 Aligned_cols=223 Identities=19% Similarity=0.225 Sum_probs=170.6
Q ss_pred HHHhcCCCCC-CeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCC-CCCC-----------c
Q 040267 276 IAATSNFSAQ-NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK-HPNL-----------E 338 (538)
Q Consensus 276 ~~~~~~f~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-H~ni-----------~ 338 (538)
....+.|... +.||+|+||.||+|... +++.||+|.++... ....++.+|+.++..++ |||| .
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3444556665 78999999999999954 68999999997532 33578999999999995 6999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccC
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGF 415 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~ 415 (538)
.++||||+++|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 3699999999999999976655579999999999999999999999 99999999999999998 78999999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
++.... .++.++||||||+++|||++|+.||......+ ....... ...
T Consensus 181 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~-~~~- 250 (327)
T 3lm5_A 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--------TYLNISQ-VNV- 250 (327)
T ss_dssp CEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHH-TCC-
T ss_pred ccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--------HHHHHHh-ccc-
Confidence 975432 16789999999999999999999997533211 1111111 000
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+ .....+..+.+++ .+||+.||++|||++|+++.
T Consensus 251 ~~~~~--~~~~~~~~~~~li---~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 DYSEE--TFSSVSQLATDFI---QSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCCTT--TTTTSCHHHHHHH---HHHSCSSGGGSCCHHHHTTC
T ss_pred ccCch--hhcccCHHHHHHH---HHHcCCChhhCcCHHHHhCC
Confidence 00000 0112233444444 49999999999999999863
No 205
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.4e-33 Score=299.53 Aligned_cols=218 Identities=19% Similarity=0.299 Sum_probs=171.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
.++|...+.||+|+||+||+|... +++.||||++... ......+.+|++++++++||||+ .++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 346888899999999999999954 6899999998642 23467899999999999999993 36999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999987655 59999999999999999999999 9999999999999995 45689999999997543
Q ss_pred CC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 GD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.. ++.++||||+||++|||++|+.||...... ...... ..+...... +.
T Consensus 176 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i-~~~~~~~~~-~~ 245 (486)
T 3mwu_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRV-ETGKYAFDL-PQ 245 (486)
T ss_dssp CC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-HHTCCCSCS-GG
T ss_pred CCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-HhCCCCCCC-cc
Confidence 21 678899999999999999999999754321 111111 111111000 00
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...++++..+++ +||+.||++|||+.|+++.
T Consensus 246 ~--~~~s~~~~~li~---~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 W--RTISDDAKDLIR---KMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G--GGSCHHHHHHHH---HHTCSSTTTSCCHHHHHHC
T ss_pred c--CCCCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 0 112345555555 9999999999999999874
No 206
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.7e-34 Score=295.69 Aligned_cols=233 Identities=18% Similarity=0.224 Sum_probs=168.4
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
....++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 34567899999999999999999995 5799999999865432 234799999999999992
Q ss_pred ---------------------------------ccEEEeecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh
Q 040267 339 ---------------------------------KPLVYKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLH 383 (538)
Q Consensus 339 ---------------------------------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH 383 (538)
.++||||++ |+|.+.+.. .....+++..+..++.|++.||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 458999998 588887764 12246999999999999999999999
Q ss_pred cCCCCCccccCCCCCCeeeC-CCCCeEEEeccCCcccCC-----------------------CCCCccCcccHHHHHHHH
Q 040267 384 HCCHPPCLHQNISSSVILVD-EDFDARIMDFGFSRLTNG-----------------------DASLQKDVHGFGVVLLEL 439 (538)
Q Consensus 384 ~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~-----------------------~~~~~~DV~S~Gvvl~el 439 (538)
+ .+|+||||||+||+++ .++.+||+|||+++.... .++.++||||+||++|||
T Consensus 159 ~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 159 S---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp T---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred H---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 9 9999999999999997 688999999999975321 168899999999999999
Q ss_pred HhCCCCCCCCcccccccccHHHHHHHHhc---------cCCcccccccccc--------CCCcHHHHHHHHHHHhHccCC
Q 040267 440 VTGQKPFEINASEEGYKGNLVNWIDQLSS---------SGRIKDVIDKALT--------GKGYDDEILQFLQIACKCVAV 502 (538)
Q Consensus 440 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~~l~--------~~~~~~~~~~l~~l~~~cl~~ 502 (538)
++|+.||......+. +...+...-. .....+..-+... ....+.++. +++.+||+.
T Consensus 236 l~g~~pf~~~~~~~~----~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~L~~ 308 (383)
T 3eb0_A 236 ILGKPLFSGETSIDQ----LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI---DLLEQILRY 308 (383)
T ss_dssp HHSSCSSCCSSHHHH----HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHH---HHHHHHCCS
T ss_pred HhCCCCCCCCChHHH----HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHH---HHHHHHccC
Confidence 999999986433221 1111110000 0001111001111 111233444 455599999
Q ss_pred CCCCCCCHHHHHH--HHHHhHH
Q 040267 503 RPKEKWSMYQVYI--SLCSIAE 522 (538)
Q Consensus 503 dP~~RPs~~evl~--~L~~i~~ 522 (538)
||++|||+.|+++ .++++..
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 309 EPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp SGGGSCCHHHHHTSGGGHHHHH
T ss_pred ChhhCCCHHHHhcCHHHHHHHh
Confidence 9999999999985 3454443
No 207
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.5e-34 Score=282.36 Aligned_cols=216 Identities=23% Similarity=0.316 Sum_probs=167.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc------------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK------------------ 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~------------------ 339 (538)
.++|...+.||+|+||.||+|+. .+++.||||.++......+.+.+|+.++++++||||.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45688889999999999999995 47999999999765555577899999999999999932
Q ss_pred ------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 340 ------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 340 ------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeC
Confidence 58999999999999998654 357889999999999999999999 99999999999999999999999999
Q ss_pred cCCcccC--------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccc
Q 040267 414 GFSRLTN--------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGY 455 (538)
Q Consensus 414 g~a~~~~--------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~ 455 (538)
|++.... ..++.++||||||+++|||++ ||....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~----- 232 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM----- 232 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----
Confidence 9987542 126788999999999999998 554211
Q ss_pred cccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 456 KGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
........... .. ....+.+. ...+..+. +++.+||+.||++|||+.|+++
T Consensus 233 --~~~~~~~~~~~-~~--~~~~~~~~-~~~~~~~~---~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 --ERVNILKKLRS-VS--IEFPPDFD-DNKMKVEK---KIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --HHHHHHHHHHS-TT--CCCCTTCC-TTTSHHHH---HHHHHHTCSSGGGSCCHHHHHH
T ss_pred --hHHHHHHhccc-cc--cccCcccc-ccchHHHH---HHHHHHHhcCcccCcCHHHHhC
Confidence 11111111111 10 00111111 11223344 4555999999999999999986
No 208
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.1e-34 Score=303.02 Aligned_cols=219 Identities=17% Similarity=0.269 Sum_probs=171.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...++||+|+||.||+|+.. +|+.||+|++.+.. ...+.+.+|++++++++|||| ..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888899999999999999964 69999999996532 334678899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 3469999999999999999999999 999999999999999999999999999997532
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++|||||||++|||+||+.||....... ........... ...
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~----~~~~~~~~i~~-~~~----- 410 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRVLE-QAV----- 410 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC----CHHHHHHHHHH-CCC-----
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch----hHHHHHHHHhh-ccc-----
Confidence 1 16789999999999999999999998643211 11122222111 110
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSM-----YQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 515 (538)
.. ....+.++..+++ +||+.||++||++ .+|++
T Consensus 411 -~~-p~~~s~~~~~li~---~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 -TY-PDKFSPASKDFCE---ALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -CC-CTTSCHHHHHHHH---HHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -CC-CcccCHHHHHHHH---HhccCCHhHCCCCcccCHHHHHc
Confidence 01 1223445555555 9999999999975 56654
No 209
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.1e-34 Score=280.76 Aligned_cols=213 Identities=16% Similarity=0.241 Sum_probs=170.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++.++|||| ..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 46778899999999999999965 58899999986532 234668899999999999999 246999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp ECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999987654 59999999999999999999999 9999999999999999999999999999875431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++||||||+++|||++|+.||...... +....... ... .+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~------~~ 234 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKK-NEY------SI 234 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHT-TCC------CC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhh-ccC------CC
Confidence 1567899999999999999999999753321 11111111 110 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++.++++ +||+.||++|||+.|+++.
T Consensus 235 -~~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 -PKHINPVAASLIQ---KMLQTDPTARPTINELLND 266 (294)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSGGGSCCGGGGGGS
T ss_pred -ccccCHHHHHHHH---HHcccChhhCcCHHHHhhC
Confidence 1122334444444 9999999999999999874
No 210
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.6e-34 Score=286.57 Aligned_cols=214 Identities=16% Similarity=0.240 Sum_probs=170.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
..+|...+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+.+++.++|||| ..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888899999999999999964 58899999986532 234678899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999988654 59999999999999999999999 9999999999999999999999999999975431
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||++|+.||...... ........ ... .
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~-~~~------~ 259 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKK-NEY------S 259 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-TCC------C
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHhc-CCC------C
Confidence 1567899999999999999999999753221 11111111 110 0
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+ ....+.++.++++ +||+.||++|||+.|+++.
T Consensus 260 ~-~~~~~~~~~~li~---~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 I-PKHINPVAASLIQ---KMLQTDPTARPTINELLND 292 (335)
T ss_dssp C-CTTSCHHHHHHHH---HHTCSSGGGSCCGGGGGGS
T ss_pred C-CccCCHHHHHHHH---HHccCChhHCcCHHHHhcC
Confidence 1 1122334444554 9999999999999999874
No 211
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.3e-33 Score=281.06 Aligned_cols=216 Identities=18% Similarity=0.302 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+.++++++|||| ..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 46788899999999999999954 68999999997543 234568899999999999999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~-- 421 (538)
++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 89 SGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred CCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999997655 58999999999999999999999 999999999999999 7889999999999875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... ....... .+... . .... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~-~~~~~-~-~~~~-~ 231 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIK-EGYYE-F-ESPF-W 231 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHH-HCCCC-C-CTTT-T
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHH-cCCCC-C-Cccc-c
Confidence 1677999999999999999999999753321 1111111 11110 0 0001 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.+++. +|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 232 DDISESAKDFIC---HLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTSCHHHHHHHH---HHHCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 122344455555 999999999999999986
No 212
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-33 Score=288.65 Aligned_cols=166 Identities=23% Similarity=0.331 Sum_probs=144.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------------~ 339 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.+++||||+ .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45788899999999999999995 468899999997533 2236788999999999999992 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||++ |+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 69999997 5999999865 49999999999999999999999 99999999999999999999999999998743
Q ss_pred CC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 420 NG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 420 ~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
.. .++.++|||||||++|||++|+.||.....
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 21 168899999999999999999999986443
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.2e-34 Score=291.43 Aligned_cols=219 Identities=16% Similarity=0.281 Sum_probs=166.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc--cHHHHHHHHHH-HhcCCCCCC-----------cccE
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL--GEKQFLLEMKQ-VGLLKHPNL-----------EKPL 341 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~E~~~-l~~l~H~ni-----------~~~l 341 (538)
...++|...+.||+|+||.||+|.. .+|+.||||+++.... ...++..|+.+ ++.++|||| ..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3456788889999999999999995 5789999999975432 23455666665 788899999 3469
Q ss_pred EEeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
||||+++ +|.+++... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999975 999988742 22469999999999999999999998 6 999999999999999999999999998863
Q ss_pred cC--------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 419 TN--------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 419 ~~--------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.. ..++.++|||||||++|||+||+.||...... ...+........
T Consensus 204 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~~- 275 (340)
T 3an0_A 204 LVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS- 275 (340)
T ss_dssp HSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC-
T ss_pred cccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HHHHHHHhcCCC-
Confidence 21 12678999999999999999999999752211 111112111111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.......+.++ .+++.+||+.||++|||+.|+++
T Consensus 276 -----~~~~~~~~~~~~---~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 -----PQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -----CCCCGGGSCHHH---HHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----CCCCcccCCHHH---HHHHHHHccCCcccCcCHHHHhc
Confidence 111111123344 44555999999999999999987
No 214
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-33 Score=295.63 Aligned_cols=163 Identities=19% Similarity=0.251 Sum_probs=141.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||+++... ...+++.+|++++++++||||+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 45788899999999999999995 468899999997532 2346789999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 379999997 59999998754 69999999999999999999999 9999999999999999999999999999974
Q ss_pred cC----------------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCC
Q 040267 419 TN----------------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 419 ~~----------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
.. ..++.++|||||||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 31 117889999999999999998666554
No 215
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.7e-33 Score=279.76 Aligned_cols=217 Identities=17% Similarity=0.250 Sum_probs=168.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+++.+|++++++++|||| ..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 456888899999999999999965 58999999987533 445789999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc------
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT------ 419 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~------ 419 (538)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 99999999987633 259999999999999999999999 99999999999999999999999999986411
Q ss_pred ----------------------CCCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 420 ----------------------NGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 420 ----------------------~~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
...++.++||||||+++|||++|+.||...... .......... .....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~- 243 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSD-PPTLL- 243 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSC-CCCCS-
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HHHHHHhccC-CcccC-
Confidence 122677999999999999999999999753321 1111111111 11100
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+..+.. ++.+||+.||++|||+.|+++
T Consensus 244 ---~~~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 ---TPSKWSVEFRD---FLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SGGGSCHHHHH---HHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CccccCHHHHH---HHHHHcccChhhCCCHHHHhc
Confidence 01112334444 455999999999999999976
No 216
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=289.48 Aligned_cols=224 Identities=21% Similarity=0.294 Sum_probs=169.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..++|...+.||+|+||.||+|...+ .||+|.++... ...+.+.+|+.++++++|||| ..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678899999999999999999744 49999987432 223567889999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp BCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred ecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999998654 368999999999999999999999 9999999999999998 6799999999875431
Q ss_pred ----------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 421 ----------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 421 ----------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
..++.++||||||+++|||++|+.||...... ......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~ 255 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AIIWQM 255 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHHHHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHh
Confidence 01467899999999999999999999753321 111111
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..+.. +.......+.++. +++.+||+.||++|||+.++++.|+++.++..
T Consensus 256 -~~~~~-----~~~~~~~~~~~l~---~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 256 -GTGMK-----PNLSQIGMGKEIS---DILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp -HTTCC-----CCCCCSSCCTTHH---HHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred -ccCCC-----CCCCcCCCCHHHH---HHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11111 1111111223444 45559999999999999999999999887653
No 217
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.9e-34 Score=291.25 Aligned_cols=165 Identities=24% Similarity=0.347 Sum_probs=129.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+++++.++||||+
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 35788889999999999999994 568999999996532 2346788999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++|+||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 36899999 68999998763 59999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||....
T Consensus 181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5321 26789999999999999999999998643
No 218
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.7e-34 Score=279.68 Aligned_cols=217 Identities=16% Similarity=0.249 Sum_probs=158.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc--H-HHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG--E-KQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~-~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+++.||+|+++..... . +.+.++...++.++|||| ..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45688889999999999999995 57899999999754322 2 234455566888999999 346999
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
||++ |+|.+++... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 5888887641 22469999999999999999999999 7 99999999999999999999999999986432
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. .++.++||||||+++|||+||+.||...... ............
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~--- 231 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS--- 231 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC---
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHHHHHhccCC---
Confidence 1 1567899999999999999999999742211 111111111111
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.......+.++.+ ++.+||+.||++|||+.|+++
T Consensus 232 ---~~~~~~~~~~~~~~---li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 ---PQLPADKFSAEFVD---FTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CCCCTTTSCHHHHH---HHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCcccccCCHHHHH---HHHHHhhcChhhCcCHHHHHh
Confidence 11111123344444 445999999999999999987
No 219
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.3e-34 Score=289.31 Aligned_cols=236 Identities=18% Similarity=0.206 Sum_probs=163.0
Q ss_pred HHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-------------
Q 040267 273 VHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE------------- 338 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~------------- 338 (538)
.+.....++|...+.||+|+||.||+|.. .+++.||||++........++.+|++.+..++||||+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 45667788999999999999999999996 4689999999876555456677889999999999992
Q ss_pred -----ccEEEeecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCccccCCCCCCeeeCC-CCCe
Q 040267 339 -----KPLVYKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLH--HCCHPPCLHQNISSSVILVDE-DFDA 408 (538)
Q Consensus 339 -----~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~ivH~Dlkp~NIll~~-~~~~ 408 (538)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| + .+|+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcE
Confidence 4689999986 55554432 22346899999999999999999999 7 99999999999999996 8999
Q ss_pred EEEeccCCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHH-
Q 040267 409 RIMDFGFSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWID- 464 (538)
Q Consensus 409 kl~Dfg~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 464 (538)
||+|||+++.... .++.++|||||||++|||++|+.||......+. +...+.
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~----~~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ----LHEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHH
T ss_pred EEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH----HHHHHHH
Confidence 9999999975432 168899999999999999999999986443211 111111
Q ss_pred ----------HHhccCCcccccccc------ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 465 ----------QLSSSGRIKDVIDKA------LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 465 ----------~~~~~~~~~~~~d~~------l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
............+.. ............+.+++.+||+.||.+|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 110000000000000 0000000122344555559999999999999999874
No 220
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.2e-33 Score=280.33 Aligned_cols=218 Identities=19% Similarity=0.313 Sum_probs=169.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----------ccHHHHHHHHHHHhcCC-CCCC--------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----------LGEKQFLLEMKQVGLLK-HPNL-------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-H~ni-------- 337 (538)
..++|...+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++ ||||
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467888999999999999999964 68899999986432 12356889999999996 9999
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEeccc
Confidence 3469999999999999998754 59999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 415 FSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 415 ~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
++..... .++.++||||||+++|||++|+.||...... ......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~ 241 (298)
T 1phk_A 170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LMLRMI 241 (298)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH
T ss_pred chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--------HHHHHH
Confidence 9875432 1467899999999999999999999753221 111111
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. .+... ...+.. ...+..+ .+++.+||+.||++|||+.|+++
T Consensus 242 ~-~~~~~-~~~~~~--~~~~~~l---~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 242 M-SGNYQ-FGSPEW--DDYSDTV---KDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp H-HTCCC-CCTTTG--GGSCHHH---HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred h-cCCcc-cCcccc--cccCHHH---HHHHHHHccCCcccCCCHHHHHh
Confidence 1 11111 000000 1122344 44555999999999999999975
No 221
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.4e-33 Score=284.50 Aligned_cols=167 Identities=17% Similarity=0.264 Sum_probs=145.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe--CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCC------C-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML--LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN------L-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n------i-----------~~~ 340 (538)
++|...+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.++|++ + ..+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 4788889999999999999985 36889999999865555677899999999998765 4 336
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------------
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------------- 404 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------------- 404 (538)
+||||+ +++|.+++...+...+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 999999 8899999988765578999999999999999999999 99999999999999987
Q ss_pred ---CCCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 405 ---DFDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 405 ---~~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
++.+||+|||+++.... .++.++||||||+++|||++|+.||....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 67899999999875432 27889999999999999999999998643
No 222
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.6e-33 Score=299.62 Aligned_cols=222 Identities=18% Similarity=0.265 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
.+.|...+.||+|+||.||+|... ++..||+|.++... .....+.+|+.+++.++||||+ .++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346888899999999999999964 68899999997532 3356789999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999987665 59999999999999999999999 999999999999999764 559999999987543
Q ss_pred C---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 G---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .++.++||||+||++|||++|+.||...... ....... .+... ...+.
T Consensus 191 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~-~~~~~-~~~~~ 260 (494)
T 3lij_A 191 NQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVE-KGKYT-FDSPE 260 (494)
T ss_dssp TTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCCC-CCSGG
T ss_pred CCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-hCCCC-CCchh
Confidence 2 1678999999999999999999999864321 1111111 11111 00111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHh
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSI 520 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i 520 (538)
. ...+.++..+++ +||+.||.+|||+.|+++. +.+.
T Consensus 261 ~--~~~s~~~~~li~---~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 W--KNVSEGAKDLIK---QMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp G--TTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred c--ccCCHHHHHHHH---HHCCCChhhCccHHHHhcCcccccC
Confidence 1 122345555555 9999999999999999863 4444
No 223
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-33 Score=286.67 Aligned_cols=227 Identities=22% Similarity=0.259 Sum_probs=169.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...+.||+|+||.||+|.. .+|+.||+|++.... .....+.+|+++++.++||||+
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688889999999999999996 578999999986432 2346788999999999999992
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++||||+++ +|.+.+.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3699999985 8888776654 259999999999999999999999 99999999999999999999999999998
Q ss_pred cccC----------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 417 RLTN----------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 417 ~~~~----------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
+... ..++.++|||||||++|||+||+.||......+ ....+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~i~~~~~ 246 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-----QLALISQLCG 246 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHhC
Confidence 6432 116789999999999999999999998643221 1111111111
Q ss_pred c---CCccccccccc--------c-CCCcHHHH------HHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 469 S---GRIKDVIDKAL--------T-GKGYDDEI------LQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 469 ~---~~~~~~~d~~l--------~-~~~~~~~~------~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ......-+... . .....+.. ..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0 00000000000 0 00111111 224556669999999999999999873
No 224
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=280.57 Aligned_cols=217 Identities=18% Similarity=0.307 Sum_probs=165.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
..++|...+.||+|+||.||+|... +|+.||+|.+.... ..+++.+|+.++.+++|||| ..++||||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 3457888899999999999999964 58999999997543 34678999999999999999 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++.+||+|||++.....
T Consensus 106 ~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp CTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 99999999997432 269999999999999999999999 9999999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... ......... ....... .
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~----~ 248 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--------RAIFMIPTN-PPPTFRK----P 248 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-CCCCCSS----G
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcC-CCcccCC----c
Confidence 1578999999999999999999999753221 111111111 0000000 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+..+.. ++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~l~~---li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTD---FVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHH---HHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHH---HHHHHccCChhhCcCHHHHHh
Confidence 112334444 455999999999999999986
No 225
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-33 Score=289.90 Aligned_cols=232 Identities=16% Similarity=0.209 Sum_probs=171.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-----------CCCC----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-----------HPNL---------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------H~ni---------- 337 (538)
++|...+.||+|+||.||+|.. .+++.||||.+.......+.+.+|++++.+++ |+||
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 4688889999999999999995 56899999999866555677889999999886 7788
Q ss_pred -----cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeC------CC
Q 040267 338 -----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVD------ED 405 (538)
Q Consensus 338 -----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~------~~ 405 (538)
..++||||+ +++|.+++.......+++..+..++.||+.||+|||+ . +|+||||||+|||++ ..
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCc
Confidence 236899999 8899999987655569999999999999999999999 8 999999999999994 44
Q ss_pred CCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc--ccHHHHH
Q 040267 406 FDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK--GNLVNWI 463 (538)
Q Consensus 406 ~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~--~~~~~~~ 463 (538)
+.+||+|||+++.... .++.++|||||||++|||+||+.||.......... ..+....
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 5899999999975432 17889999999999999999999998543221100 0111111
Q ss_pred HHH-----------------hcc-CCcccccccc-------c--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQL-----------------SSS-GRIKDVIDKA-------L--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~-----------------~~~-~~~~~~~d~~-------l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
... ... +....+.... + ...........+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 000 000 0000000000 0 01233455566777888999999999999999987
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.4e-33 Score=279.83 Aligned_cols=227 Identities=19% Similarity=0.266 Sum_probs=169.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe--CCCCEEEEEEccccc---ccHHHHHHHHHHHhcC---CCCCCc----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML--LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLL---KHPNLE---------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~H~ni~---------- 338 (538)
.+.++|...+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.+++.+ +||||.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457889999999999999999996 468899999986432 1224567788777766 899992
Q ss_pred ------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 339 ------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 339 ------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
.++||||++ |+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEec
Confidence 358999998 699999987665569999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc-c
Q 040267 413 FGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-S 469 (538)
Q Consensus 413 fg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 469 (538)
||+++.... .++.++||||||+++|||++|+.||......+ ....+..... .
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~ 238 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-----QLGKILDVIGLP 238 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCC
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHHHcCCC
Confidence 999875431 16889999999999999999999998643221 1111111110 0
Q ss_pred --CCccc-------ccc----ccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 470 --GRIKD-------VID----KAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 470 --~~~~~-------~~d----~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+.. ... ..+ .....+..+.+++. +||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHH---HHcCCCcccCCCHHHHhc
Confidence 00000 000 000 00112334444444 999999999999999985
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.8e-33 Score=285.96 Aligned_cols=165 Identities=23% Similarity=0.328 Sum_probs=143.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------------~ 339 (538)
.++|...+.||+|+||.||+|... +|+.||||.++... ....++.+|++++++++||||. .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467888899999999999999964 68999999997433 2345688999999999999992 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||+. |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 69999997 5999999874 49999999999999999999999 99999999999999999999999999998743
Q ss_pred C----------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 420 N----------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 420 ~----------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. ..++.++|||||||++|||++|+.||....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 126778999999999999999999998643
No 228
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.5e-33 Score=284.91 Aligned_cols=221 Identities=18% Similarity=0.242 Sum_probs=157.1
Q ss_pred hcCCCCC-CeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccE
Q 040267 279 TSNFSAQ-NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPL 341 (538)
Q Consensus 279 ~~~f~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~l 341 (538)
.++|... ++||+|+||.||+|... +++.||||++..... ...+....+..++||||. .++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 4567774 46999999999999965 699999999965322 222233345667899982 468
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
||||+++|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.
T Consensus 104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999999988765679999999999999999999999 99999999999999986 45699999999975
Q ss_pred cCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 419 TNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 419 ~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.... ++.++||||||+++|||++|+.||.......... ........+.. ..
T Consensus 181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~-~~-- 252 (336)
T 3fhr_A 181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-----GMKRRIRLGQY-GF-- 252 (336)
T ss_dssp C----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CC--
T ss_pred ccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-----hHHHhhhcccc-cc--
Confidence 4321 4568899999999999999999997543221100 00000000000 00
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.......+.++.++++ +||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 253 PNPEWSEVSEDAKQLIR---LLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CTTTSTTCCHHHHHHHH---HHSCSSGGGSCCHHHHHHS
T ss_pred CchhhccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 00001122344555554 9999999999999999973
No 229
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-33 Score=293.14 Aligned_cols=221 Identities=22% Similarity=0.284 Sum_probs=162.4
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------------ccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------------KPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------------~~lv 342 (538)
+|...+.||+|+||.||+|+.. +|+.||||++..... ...+|++++++++||||+ .++|
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 5777899999999999999964 699999999865322 234799999999999993 2489
Q ss_pred EeecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~ 419 (538)
|||+++ +|.+.+.. .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 67666643 122469999999999999999999999 999999999999999965 56899999999753
Q ss_pred CC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc--------
Q 040267 420 NG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-------- 468 (538)
Q Consensus 420 ~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 468 (538)
.. .++.++|||||||++|||++|+.||......+ .+...+...-.
T Consensus 208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~----~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD----QLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCSCCHHHHHH
T ss_pred ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHHHHHh
Confidence 21 26789999999999999999999998643321 11111111000
Q ss_pred -cCCccccccccccC--------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 -SGRIKDVIDKALTG--------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 -~~~~~~~~d~~l~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+..-+.+.. ...+.++. +|+.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI---ALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHH---HHHHHHSCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHH---HHHHHhccCChhHCCCHHHHhC
Confidence 00111111111111 11123444 4555999999999999999986
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.8e-33 Score=286.85 Aligned_cols=164 Identities=21% Similarity=0.327 Sum_probs=140.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|+.+++.++||||+
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35788889999999999999995 4689999999975332 246788999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++||||+. |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 179999997 589888743 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 246 (371)
T 4exu_A 193 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246 (371)
T ss_dssp -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4321 26889999999999999999999998643
No 231
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.3e-33 Score=307.00 Aligned_cols=214 Identities=20% Similarity=0.267 Sum_probs=170.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|...++||+|+||.||+|.. .+++.||||++++. ....+.+..|..++..+ +||+| ..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 456799999999999999999995 46889999999753 23346788999999988 68988 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++...+ .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999998765 59999999999999999999999 999999999999999999999999999998521
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++|||||||++|||++|+.||...... +....... +..
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~-~~~----- 559 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIME-HNV----- 559 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHS-SCC-----
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-CCC-----
Confidence 1 1788999999999999999999999864321 11222221 111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSM-----YQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 515 (538)
.+ ....+.++.++++ +||+.||++||++ +||++
T Consensus 560 -~~-p~~~s~~~~~li~---~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 -AY-PKSMSKEAVAICK---GLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -CC-CTTSCHHHHHHHH---HHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -CC-CccCCHHHHHHHH---HHccCCHHHCCCCCCCcHHHHhc
Confidence 01 1223445666666 9999999999998 56654
No 232
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=281.63 Aligned_cols=164 Identities=24% Similarity=0.354 Sum_probs=136.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCcc------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLEK------------------ 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~~------------------ 339 (538)
++|...+.||+|+||.||+|... +++.||+|++.... ...+++.+|++++++++||||..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56788899999999999999965 48999999986543 33467899999999999999932
Q ss_pred -------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEE
Q 040267 340 -------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIM 411 (538)
Q Consensus 340 -------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 411 (538)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 48999998 6999999753 48999999999999999999999 9999999999999997 56799999
Q ss_pred eccCCcccC---------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 412 DFGFSRLTN---------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 412 Dfg~a~~~~---------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
|||+++... ..++.++||||||+++|||++|+.||....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 999997542 126778999999999999999999998643
No 233
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.9e-33 Score=286.82 Aligned_cols=164 Identities=21% Similarity=0.275 Sum_probs=139.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|+.+++.++||||+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788889999999999999985 468899999996532 2245688999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 2799999975 88888863 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||....
T Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 16889999999999999999999998643
No 234
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2e-33 Score=285.45 Aligned_cols=167 Identities=17% Similarity=0.267 Sum_probs=143.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CC-CEEEEEEcccccccHHHHHHHHHHHhcCCCCC------C-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DG-SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN------L-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n------i-----------~~~ 340 (538)
++|...+.||+|+||.||+|... ++ +.||+|+++......+.+.+|++++++++|++ + ..+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 57888899999999999999953 44 68999999865555677889999999998766 3 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee------------------
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV------------------ 402 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll------------------ 402 (538)
+||||+ ++++.+++.......+++.++..++.|++.||+|||+ .+|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 6688888877654579999999999999999999999 999999999999999
Q ss_pred -CCCCCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 403 -DEDFDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 403 -~~~~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.++.+||+|||+++.... .++.++|||||||++|||++|+.||....
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 5678999999999975332 27889999999999999999999998643
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.9e-33 Score=272.41 Aligned_cols=218 Identities=19% Similarity=0.282 Sum_probs=170.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
..++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++|||| ..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3457889999999999999999964 68999999986432 345789999999999999999 33599
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~ 419 (538)
+||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999987654 58999999999999999999999 999999999999999754 47999999998754
Q ss_pred CC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 420 NG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 420 ~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.. .++.++||||||+++|||++|+.||...... ...... ..+...... +
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~-~~~~~~~~~-~ 244 (287)
T 2wei_A 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRV-ETGKYAFDL-P 244 (287)
T ss_dssp CCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-HHCCCCCCS-G
T ss_pred cCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-HcCCCCCCc-h
Confidence 32 1678899999999999999999999753321 111111 111111000 0
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....++++..+++ +|++.||++|||+.|+++
T Consensus 245 ~--~~~~~~~~~~li~---~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 245 Q--WRTISDDAKDLIR---KMLTFHPSLRITATQCLE 276 (287)
T ss_dssp G--GTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHH
T ss_pred h--hhhcCHHHHHHHH---HHcccChhhCcCHHHHhc
Confidence 0 0112334444444 999999999999999987
No 236
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.9e-33 Score=285.25 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc------------------HHHHHHHHHHHhcCCCCCC---
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG------------------EKQFLLEMKQVGLLKHPNL--- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~E~~~l~~l~H~ni--- 337 (538)
.++|...+.||+|+||.||+|.. +++.||+|.+...... .+.+.+|++++++++||||
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 9999999999643211 1789999999999999999
Q ss_pred --------cccEEEeecCCCCHHHH------hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 --------EKPLVYKYMSNGTLYSL------LHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 --------~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ ..+|+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 34699999999999999 665434579999999999999999999996 37899999999999999
Q ss_pred CCCCeEEEeccCCcccCCC----------------------CCC-ccCcccHHHHHHHHHhCCCCCCCCcccccccccHH
Q 040267 404 EDFDARIMDFGFSRLTNGD----------------------ASL-QKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~----------------------~~~-~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 460 (538)
.++.+||+|||.+...... ++. ++||||||+++|||++|+.||...... ..+
T Consensus 187 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~- 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL----VEL- 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----HHH-
T ss_pred CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHH-
Confidence 9999999999999754221 223 899999999999999999999854321 111
Q ss_pred HHHHHHhccCCcccc------cccccc------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 461 NWIDQLSSSGRIKDV------IDKALT------GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~------~d~~l~------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... ..+..... ..+... ....+.++.+ ++.+||+.||++|||+.|+++
T Consensus 262 --~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 --FNNI-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDID---FLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHHH-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHH---HHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHH-hccCcCCccchhhhhccccccccccchhhcCHHHHH---HHHHHccCChhhCCCHHHHhc
Confidence 1111 11111000 000000 0122334444 555999999999999999987
No 237
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.6e-34 Score=295.79 Aligned_cols=224 Identities=18% Similarity=0.245 Sum_probs=161.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------------~~lv 342 (538)
.+|...+.||+|+||.||+|+..++..||+|++..... ...+|+++++.++||||+ .++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 35788899999999999999987777799998854322 123699999999999992 4589
Q ss_pred EeecCCCCHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~ 420 (538)
|||++++.+...... .....+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 999987544333221 112369999999999999999999999 9999999999999999 78999999999997532
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc---------
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--------- 468 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 468 (538)
. .++.++|||||||++|||++|+.||......+. +...+...-.
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~----l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ----LVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHHHCCCCHHHHHHH
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCCHHHHHhh
Confidence 1 178899999999999999999999986443211 1111111000
Q ss_pred cCCccccccccccC--------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 469 SGRIKDVIDKALTG--------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 469 ~~~~~~~~d~~l~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........-+.... ...+.++ .+++.+||+.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDA---IDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHH---HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHH---HHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000000 1122344 445559999999999999999874
No 238
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.2e-33 Score=286.80 Aligned_cols=164 Identities=24% Similarity=0.331 Sum_probs=130.8
Q ss_pred CCC-CCeEeecCCceEEEEEeC---CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-------------ccEEEe
Q 040267 282 FSA-QNVLVSTWTGTTYKAMLL---DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-------------KPLVYK 344 (538)
Q Consensus 282 f~~-~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-------------~~lv~e 344 (538)
|.. .++||+|+||.||+|+.. +++.||||++..... ...+.+|++++++++||||+ .++|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 443 458999999999999965 478999999975433 35788999999999999992 358999
Q ss_pred ecCCCCHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEec
Q 040267 345 YMSNGTLYSLLHSNG-------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDF 413 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Df 413 (538)
|++ |+|.+++.... ...+++..+..|+.|++.||+|||+ .+|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 997 48888876321 1248999999999999999999999 999999999999999 67899999999
Q ss_pred cCCcccCC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 414 GFSRLTNG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 414 g~a~~~~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
|+++.... .++.++|||||||++|||++|+.||....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99974321 16788999999999999999999997543
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=280.43 Aligned_cols=163 Identities=21% Similarity=0.327 Sum_probs=140.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ..+++.+|+.+++.++||||+
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4677889999999999999995 4689999999975332 235688999999999999991
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 279999997 588887753 48999999999999999999999 9999999999999999999999999999975
Q ss_pred cCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
... .++.++||||||+++|||++|+.||....
T Consensus 176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 321 26789999999999999999999998643
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=283.81 Aligned_cols=212 Identities=19% Similarity=0.302 Sum_probs=163.1
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc-------cHHHHHHHHHHHhcC----CCCCC----
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLL----KHPNL---- 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l----~H~ni---- 337 (538)
+.....++|...+.||+|+||.||+|.. .+++.||||.++.... ....+.+|+.++.++ +|+||
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3344567899999999999999999985 5689999999975432 123466799999998 89999
Q ss_pred -------cccEEEee-cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCe
Q 040267 338 -------EKPLVYKY-MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDA 408 (538)
Q Consensus 338 -------~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~ 408 (538)
..++|+|| +++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeE
Confidence 34689999 78999999998755 59999999999999999999999 9999999999999999 88999
Q ss_pred EEEeccCCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 409 RIMDFGFSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 409 kl~Dfg~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
||+|||+++..... .+.++||||||+++|||++|+.||..... ..
T Consensus 180 kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~--- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------IL--- 246 (312)
T ss_dssp EECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HH---
T ss_pred EEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------Hh---
Confidence 99999998765321 23489999999999999999999974210 00
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ... .+ ....+..+.. ++.+||+.||++|||+.|+++
T Consensus 247 -~-~~~------~~-~~~~~~~~~~---li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 -E-AEL------HF-PAHVSPDCCA---LIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -H-TCC------CC-CTTSCHHHHH---HHHHHTCSSTTTSCCHHHHHH
T ss_pred -h-hcc------CC-cccCCHHHHH---HHHHHccCChhhCcCHHHHhc
Confidence 0 000 01 1122334444 455999999999999999987
No 241
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.3e-33 Score=280.45 Aligned_cols=216 Identities=15% Similarity=0.210 Sum_probs=166.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC--CCCC-----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK--HPNL-----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--H~ni-----------~~~l 341 (538)
..++|...+.||+|+||.||++...+++.||||.+.... ...+.+.+|++++.+++ |+|| ..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 345688889999999999999998889999999996433 23467899999999997 5888 3358
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||| +.+++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||+++....
T Consensus 106 v~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 999 56789999998765 68999999999999999999999 99999999999999964 8999999999875321
Q ss_pred ------------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 422 ------------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 422 ------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
.++.++||||||+++|||++|+.||..... .......
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~~ 251 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA 251 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHH
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-------HHHHHHH
Confidence 245589999999999999999999975321 1111112
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....... ... ....+.++.++++ +||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~-----~~~-~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 IIDPNHE-----IEF-PDIPEKDLQDVLK---CCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHCTTSC-----CCC-CCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred HHhcccc-----cCC-cccchHHHHHHHH---HHccCCcccCcCHHHHhcC
Confidence 1111110 001 1122344444444 9999999999999999874
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.5e-33 Score=278.97 Aligned_cols=220 Identities=18% Similarity=0.273 Sum_probs=161.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHH-HHhcCCCCCCc-----------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMK-QVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~-~l~~l~H~ni~-----------~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+|+.||||+++... ....++..|+. +++.++||||. .++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35788889999999999999996 468999999997543 22345666666 77888999993 35899
Q ss_pred eecCCCCHHHHhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 344 KYMSNGTLYSLLHS---NGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 344 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
||+++ +|.+++.. .....+++..+.+++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 88887763 223469999999999999999999999 8 9999999999999999999999999999753
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. .++.++||||||+++|||++|+.||....... ....... .+...
T Consensus 177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~-~~~~~ 248 (327)
T 3aln_A 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQVV-KGDPP 248 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCC-CSCCC
T ss_pred ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHHHh-cCCCC
Confidence 21 15779999999999999999999997532110 0000000 00000
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+ .... ....+..+.+ ++.+||+.||++|||+.|+++
T Consensus 249 ~~-~~~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 249 QL-SNSE-EREFSPSFIN---FVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC-CCCS-SCCCCHHHHH---HHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-CCcc-cccCCHHHHH---HHHHHhhCChhhCcCHHHHHh
Confidence 00 0000 0112334444 455999999999999999986
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=1e-33 Score=284.09 Aligned_cols=209 Identities=19% Similarity=0.332 Sum_probs=166.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc-------cHHHHHHHHHHHhcCC--CCCC---------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLK--HPNL--------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~--H~ni--------- 337 (538)
...++|...+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|+.++++++ |+||
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456788899999999999999984 5689999999965321 1245778999999996 5998
Q ss_pred --cccEEEeecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEEec
Q 040267 338 --EKPLVYKYMSN-GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIMDF 413 (538)
Q Consensus 338 --~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Df 413 (538)
..++|+||+.+ ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 33589999976 89999998754 58999999999999999999999 9999999999999999 7799999999
Q ss_pred cCCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 414 GFSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 414 g~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
|+++..... .+.++||||||+++|||++|+.||..... ... +.
T Consensus 195 g~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------------~~~-~~ 259 (320)
T 3a99_A 195 GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------------IIR-GQ 259 (320)
T ss_dssp TTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------HHH-CC
T ss_pred ccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------------hhc-cc
Confidence 998754321 35678999999999999999999974210 000 00
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. . . ....++++..+++ +||+.||++|||+.||++
T Consensus 260 ~--~----~-~~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V--F----F-RQRVSSECQHLIR---WCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C--C----C-SSCCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred c--c----c-cccCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 0 0 1 1122344444444 999999999999999987
No 244
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.6e-32 Score=285.13 Aligned_cols=209 Identities=17% Similarity=0.147 Sum_probs=158.1
Q ss_pred cCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCC-CCC----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKH-PNL---------------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H-~ni---------------- 337 (538)
.+|...+.||+|+||+||+|. ..+|+.||||+++... ...+.+.+|+.+++.++| +|.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346677899999999999999 5579999999987322 234679999999999987 221
Q ss_pred ---------------------cccEEEeecCCCCHHHHhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 040267 338 ---------------------EKPLVYKYMSNGTLYSLLH-----SNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCL 391 (538)
Q Consensus 338 ---------------------~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iv 391 (538)
..+++|+++ +++|.+++. ......+++..++.++.|++.||+|||+ .+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 123455544 679999985 2223458889999999999999999999 9999
Q ss_pred ccCCCCCCeeeCCCCCeEEEeccCCcccCC-----------------------------CCCCccCcccHHHHHHHHHhC
Q 040267 392 HQNISSSVILVDEDFDARIMDFGFSRLTNG-----------------------------DASLQKDVHGFGVVLLELVTG 442 (538)
Q Consensus 392 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-----------------------------~~~~~~DV~S~Gvvl~elltg 442 (538)
||||||+|||++.++.+||+|||+++.... .++.++|||||||++|||+||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 999999999999999999999999864321 145699999999999999999
Q ss_pred CCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 443 QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 443 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.||......+.. ..++.. ....++++..++. +||+.||++|||+.|+++
T Consensus 314 ~~Pf~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~li~---~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 314 DLPNTDDAALGGS-----------------EWIFRS---CKNIPQPVRALLE---GFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SCCCCTTGGGSCS-----------------GGGGSS---CCCCCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcchhhhH-----------------HHHHhh---cccCCHHHHHHHH---HHccCChhhCcCHHHHHh
Confidence 9999864332111 111110 0122344455555 999999999999887754
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=2.9e-32 Score=294.42 Aligned_cols=233 Identities=18% Similarity=0.247 Sum_probs=168.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------------c
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------------K 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------------~ 339 (538)
++|...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+ .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999995 568999999987532 3346789999999999999992 2
Q ss_pred cEEEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccC
Q 040267 340 PLVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGF 415 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 415 (538)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 59999999999999998754 2358999999999999999999999 99999999999999997665 99999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC---
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG--- 470 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 470 (538)
+..... .++.++||||||+++|||++|+.||..... ...|........
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-------~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-------PVQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-------HHHSSTTCC------
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-------hhhhhhhhhcccchh
Confidence 976432 167899999999999999999999975321 111111110000
Q ss_pred -----Ccccc--ccccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH-----HHHHHHHhHH
Q 040267 471 -----RIKDV--IDKAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQ-----VYISLCSIAE 522 (538)
Q Consensus 471 -----~~~~~--~d~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e-----vl~~L~~i~~ 522 (538)
..... ....+ ...........+.+++.+||+.||++|||+.| ..+.+.++.+
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00000 00000 01112223344555555999999999999988 4456666544
No 246
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=7.7e-32 Score=269.67 Aligned_cols=216 Identities=17% Similarity=0.274 Sum_probs=152.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc--H-HHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG--E-KQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~-~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|... +|+.||||.+...... . +.+.++..+++.++|||| ..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 346778889999999999999964 6899999999754322 2 234455567888899999 336999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
||+ ++.+..+..... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~-~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 455655554322 368999999999999999999998 6 899999999999999999999999999864321
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||++|+.||...... ............
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~---- 247 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQEEP---- 247 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHSCC----
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhccCC----
Confidence 1567899999999999999999999752211 111112111110
Q ss_pred cccccc-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALT-GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+. ....+.++..++. +||+.||.+|||+.|+++
T Consensus 248 --~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 --PLLPGHMGFSGDFQSFVK---DCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --CCCCSSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred --CCCCccCCCCHHHHHHHH---HHccCChhHCcCHHHHhh
Confidence 0011 0112344555555 999999999999999986
No 247
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=4.7e-32 Score=283.53 Aligned_cols=214 Identities=19% Similarity=0.230 Sum_probs=156.8
Q ss_pred CCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEeecCCC
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYKYMSNG 349 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e~~~~g 349 (538)
|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+ .++||||+. |
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 33457899999999987776789999999986532 45678999999886 899993 368999996 6
Q ss_pred CHHHHhhcCCCC-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-------------CCeEEE
Q 040267 350 TLYSLLHSNGNT-----ALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-------------FDARIM 411 (538)
Q Consensus 350 sL~~~l~~~~~~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-------------~~~kl~ 411 (538)
+|.+++...... ..++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 999999875421 12344567899999999999999 999999999999999653 589999
Q ss_pred eccCCcccCC----------------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 412 DFGFSRLTNG----------------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 412 Dfg~a~~~~~----------------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
|||+++.... .++.++|||||||++|||+| |+.||......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---- 246 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 246 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH----
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh----
Confidence 9999874321 25678999999999999999 99999753221
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
......... ... .............+.+++.+||+.||++|||+.||++
T Consensus 247 --~~~i~~~~~---~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 --ESNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHHTCC---CCC-----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHhcCCC---Ccc-----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111111100 000 0111112233344556666999999999999999986
No 248
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=7.8e-32 Score=281.30 Aligned_cols=213 Identities=20% Similarity=0.251 Sum_probs=156.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e~~~ 347 (538)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+ .++||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 35777889999999997665566899999999965332 2356899999999 799993 369999996
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-----CCCeEEEeccCCcccCC-
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-----DFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~- 421 (538)
|+|.+++..... ...+..+..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+++....
T Consensus 102 -g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 102 -ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp -EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred -CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 599999987652 35556678999999999999999 99999999999999953 34688999999874321
Q ss_pred ----------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 422 ----------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 422 ----------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.++.++|||||||++|||+| |+.||...... . ..........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~---~~~~~~~~~~ 247 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------Q---ANILLGACSL 247 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------H---HHHHTTCCCC
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------H---HHHHhccCCc
Confidence 14568999999999999999 99999642211 0 1111111111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... .....+.. +.+++.+||+.||++|||+.||++
T Consensus 248 -~~~~---~~~~~~~~---~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 -DCLH---PEKHEDVI---ARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TTSC---TTCHHHHH---HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cccC---ccccccHH---HHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000 01112223 344555999999999999999984
No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.4e-31 Score=295.42 Aligned_cols=210 Identities=14% Similarity=0.202 Sum_probs=164.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------c-----c
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------E-----K 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~-----~ 339 (538)
++|...+.||+|+||.||+|... +++.||||.+.... .....+.+|++++.+++|||| . .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67888999999999999999964 58999999986432 234568899999999999999 1 4
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||+ .+|+||||||+|||++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 899999999999988754 59999999999999999999999 999999999999999986 9999999999865
Q ss_pred CCC------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 420 NGD------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 420 ~~~------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
... .+.++|||||||++|||++|..||....... +. .
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------~~-------~ 286 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------LP-------E 286 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------CC-------T
T ss_pred ccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc------------------cc-------c
Confidence 431 5678999999999999999998886421100 00 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHHHHHHhHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWS-MYQVYISLCSIAE 522 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~L~~i~~ 522 (538)
..........+.+++.+||+.||++||+ ++++.+.|..+..
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0001111234555666999999999994 6667777776543
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=7.1e-30 Score=257.88 Aligned_cols=161 Identities=14% Similarity=0.128 Sum_probs=135.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---------ccHHHHHHHHHHHhcCC---------CCCC----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---------LGEKQFLLEMKQVGLLK---------HPNL---- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~---------H~ni---- 337 (538)
++|...+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|++++++++ ||||
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4677889999999999999998 78999999997532 22377889999998886 5554
Q ss_pred -------------------------------------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 040267 338 -------------------------------------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLS 380 (538)
Q Consensus 338 -------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~ 380 (538)
..++||||+++|++.+.+... .+++.++..|+.||+.||+
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~---~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK---LSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT---CCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc---CCCHHHHHHHHHHHHHHHH
Confidence 146999999999777666542 5899999999999999999
Q ss_pred HHh-cCCCCCccccCCCCCCeeeCCCC--------------------CeEEEeccCCcccCCC-----------------
Q 040267 381 WLH-HCCHPPCLHQNISSSVILVDEDF--------------------DARIMDFGFSRLTNGD----------------- 422 (538)
Q Consensus 381 yLH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~----------------- 422 (538)
||| + .+|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 176 ~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~ 252 (336)
T 2vuw_A 176 VAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGD 252 (336)
T ss_dssp HHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCC
T ss_pred HHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCC
Confidence 999 8 9999999999999999887 8999999999854321
Q ss_pred CCCccCcccHHHH-HHHHHhCCCCCC
Q 040267 423 ASLQKDVHGFGVV-LLELVTGQKPFE 447 (538)
Q Consensus 423 ~~~~~DV~S~Gvv-l~elltg~~p~~ 447 (538)
.+.++||||+|++ .+++++|..||.
T Consensus 253 ~~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 253 GDYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp SSHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred CccceehhhhhCCCCcccccccCCCc
Confidence 4678999998777 777888999985
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.91 E-value=8.8e-25 Score=218.30 Aligned_cols=170 Identities=35% Similarity=0.520 Sum_probs=152.8
Q ss_pred CCChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCCc--ccccccCCC-CCCCEEEEEcCCCCccc--cCcccccCCC
Q 040267 7 ATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICR--FNGVSCWNG-LENRILSLELEEMNLSG--QVPESLQSCK 80 (538)
Q Consensus 7 ~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c~--w~gv~C~~~-~~~~l~~L~L~~n~l~g--~~p~~~~~l~ 80 (538)
.+.++|+.||+.|| ++.+|. .+++|..+ .+||. |.||.|+.. ..++|+.|+|++|+++| .+|+.|++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~----~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT----TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT----SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC----CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCC
Confidence 46678999999999 888876 78899742 35788 999999752 12689999999999999 9999999999
Q ss_pred CCCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEe
Q 040267 81 SLQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159 (538)
Q Consensus 81 ~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ 159 (538)
+|++|+|++ |+++|.+|..+.. +++|++|+|++|++++.+|..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCeeeCCCCCcccccCChhHhc-CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 999999995 9999999999987 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccccc-ccccc
Q 040267 160 VAYNCLSGRIPSFFNGAM-KMDML 182 (538)
Q Consensus 160 l~~N~l~g~~p~~~~~~~-~l~~~ 182 (538)
+++|.++|.+|..+..+. .|..+
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L 179 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSM 179 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEE
Confidence 999999999999887765 55443
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.89 E-value=7.3e-24 Score=227.95 Aligned_cols=152 Identities=19% Similarity=0.136 Sum_probs=111.8
Q ss_pred EeecCCceEEEEE-eCCCCEEEEEEccccc-----------ccHHHHHHHHHHHhcC-CCCCC-----------cccEEE
Q 040267 288 LVSTWTGTTYKAM-LLDGSMLAIKRLSACK-----------LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVY 343 (538)
Q Consensus 288 ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~ 343 (538)
.+.|+.|.++.++ .-.|+.+|+|.+.... ...++|.+|+++|+++ .|+|| ..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666666554 3358899999996431 1235699999999999 69999 457999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||++||+|.++|...+ .++.. +|+.||+.||+|+|+ .+||||||||+|||+++++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999998766 46653 589999999999999 99999999999999999999999999999977654
Q ss_pred CCCccCcccHHHHHHHHHhCCCCCC
Q 040267 423 ASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 423 ~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
....+++++.|++..|+++|+.++.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~~~~~ 418 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAENKSWN 418 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-------
T ss_pred ccccCceechhhccHHHhCCCCCCc
Confidence 4456677778888778777765543
No 253
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=8e-23 Score=228.74 Aligned_cols=164 Identities=21% Similarity=0.285 Sum_probs=142.7
Q ss_pred CCCChhhHHHHHHhh-cCCCCCCCCCCCCCCC---CCCCCCCcc------------cccccCCCCCCCEEEEEcCCCCcc
Q 040267 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTN---SSVGFICRF------------NGVSCWNGLENRILSLELEEMNLS 69 (538)
Q Consensus 6 ~~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~---~~~~~~c~w------------~gv~C~~~~~~~l~~L~L~~n~l~ 69 (538)
+++..+|+.||+.|| ++.+| +|+.+. ...+++|+| .||+|+. .++|+.|+|++|+|+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCE
T ss_pred cccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC--CCCEEEEECccCCCC
Confidence 344567999999999 88776 897643 112223999 9999975 579999999999999
Q ss_pred ccCcccccCCCCCCeEEc-cCCcCCCc-----------------------------------------------------
Q 040267 70 GQVPESLQSCKSLQVLNL-STNNLFGK----------------------------------------------------- 95 (538)
Q Consensus 70 g~~p~~~~~l~~L~~L~L-s~N~l~g~----------------------------------------------------- 95 (538)
|.+|++|++|++|+.|+| ++|.++|.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 88866555
Q ss_pred -----------------------CChhHhhcCCCCcEEEcccCCCCC-----------------CCCccCc--CCCCCcE
Q 040267 96 -----------------------IPTQLCKWFPYLVSLDLSNNDLSG-----------------TIPHELG--NCVYLNT 133 (538)
Q Consensus 96 -----------------------ip~~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~ 133 (538)
||..+++ +++|++|+|++|+|+| .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 8888887 9999999999999998 4999988 9999999
Q ss_pred eeecCccccCCCCccccCCccccEEeccccc-CCC-CCCccccccc
Q 040267 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNC-LSG-RIPSFFNGAM 177 (538)
Q Consensus 134 L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~-l~g-~~p~~~~~~~ 177 (538)
|+|++|++.|.+|..|.++++|+.|++++|+ |+| .+|..+..+.
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~ 541 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA 541 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh
Confidence 9999999999999999999999999999998 999 8898776554
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=9e-22 Score=193.20 Aligned_cols=139 Identities=12% Similarity=0.081 Sum_probs=114.4
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc-------------------cHHHHHHHHHHHhc
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-------------------GEKQFLLEMKQVGL 331 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~E~~~l~~ 331 (538)
.+..+......|...+.||+|+||.||+|...+|+.||+|.++.... ....+.+|++++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 44455566666777899999999999999997799999999964221 24568899999999
Q ss_pred CCCCCC-------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC
Q 040267 332 LKHPNL-------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE 404 (538)
Q Consensus 332 l~H~ni-------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 404 (538)
++|.++ ..++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+|||++
T Consensus 161 l~~~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 161 LQGLAVPKVYAWEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp TTTSSSCCEEEEETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-
T ss_pred ccCCCcCeEEeccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-
Confidence 986555 4579999999999998 422 2345799999999999999 9999999999999999
Q ss_pred CCCeEEEeccCCcccCCC
Q 040267 405 DFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 405 ~~~~kl~Dfg~a~~~~~~ 422 (538)
++.+||+|||+++.....
T Consensus 228 ~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 228 EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp TTEEEECCCTTCEETTST
T ss_pred CCcEEEEECCCCeECCCC
Confidence 999999999999876543
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.85 E-value=6.6e-22 Score=216.47 Aligned_cols=162 Identities=22% Similarity=0.297 Sum_probs=140.6
Q ss_pred CCChhhHHHHHHhh-cCCCCC--------CCCCCCCCCCCCCCCCCcc---cccccCCCCCCCEEEEEcCCCCccccCcc
Q 040267 7 ATAEDDVKCLAGIK-SFNDPQ--------GKLSSWSLTNSSVGFICRF---NGVSCWNGLENRILSLELEEMNLSGQVPE 74 (538)
Q Consensus 7 ~~~~~~~~~l~~~~-~~~~~~--------~~l~~W~~~~~~~~~~c~w---~gv~C~~~~~~~l~~L~L~~n~l~g~~p~ 74 (538)
+....|+.||..++ ++.++. ....+|..+ .++|.| .||+|+. .++|+.|+|++++++|.+|+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~----~~~c~w~~~~GV~C~~--~~~V~~L~L~~~~l~g~lp~ 99 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN----KELDMWGAQPGVSLNS--NGRVTGLSLEGFGASGRVPD 99 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS----SCGGGTTCCTTEEECT--TCCEEEEECTTSCCEEEECG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC----CCcccccCCCCeEEcC--CCCEEEEEecCcccCCcCCh
Confidence 34457999999998 765432 223478743 468999 9999975 37999999999999999999
Q ss_pred cccCCCCCCeEEccCCc---------------------------------------------------------------
Q 040267 75 SLQSCKSLQVLNLSTNN--------------------------------------------------------------- 91 (538)
Q Consensus 75 ~~~~l~~L~~L~Ls~N~--------------------------------------------------------------- 91 (538)
+|++|++|++|+|++|.
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 99999999999999984
Q ss_pred ---------------CCCcCChhHhhcCCCCcEEEcccCCCCCC-----------------CCccCc--CCCCCcEeeec
Q 040267 92 ---------------LFGKIPTQLCKWFPYLVSLDLSNNDLSGT-----------------IPHELG--NCVYLNTLYLS 137 (538)
Q Consensus 92 ---------------l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~ls 137 (538)
|+| ||..+++ +++|++|+|++|+++|. +|..++ ++++|++|+|+
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~ 257 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVY 257 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccchhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEec
Confidence 445 8988887 99999999999999986 999999 99999999999
Q ss_pred CccccCCCCccccCCccccEEeccccc-CCC-CCCcccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNC-LSG-RIPSFFNGA 176 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~-l~g-~~p~~~~~~ 176 (538)
+|+++|.+|..|.++++|+.|++++|+ ++| .+|..+..+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L 298 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL 298 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHH
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhh
Confidence 999999999999999999999999998 999 899877654
No 256
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=1.1e-21 Score=209.81 Aligned_cols=123 Identities=16% Similarity=0.248 Sum_probs=99.0
Q ss_pred CCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCCc-----------ccEE
Q 040267 283 SAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNLE-----------KPLV 342 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni~-----------~~lv 342 (538)
...+.||+|+||.||+|.. .++.+++|+...... ..+++.+|++++++++||||+ .++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 678899998643211 124589999999999999994 4699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||+++|+|.+++.. +..++.|++.||+|||+ .+|+||||||+|||+++ .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999975 45899999999999999 99999999999999999 999999999997754
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=1.2e-21 Score=219.12 Aligned_cols=158 Identities=27% Similarity=0.353 Sum_probs=122.9
Q ss_pred cCCCCChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCEEEEEcCCCCcccc---Cc------
Q 040267 4 TPTATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQ---VP------ 73 (538)
Q Consensus 4 ~~~~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c~w~gv~C~~~~~~~l~~L~L~~n~l~g~---~p------ 73 (538)
+++++.++|+.||+.|| ++.||. .+++|.. ..+||+|.||+|+ .++|+.|+|++++++|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~----~~~~C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSS----NKNPCTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCT----TSCGGGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCC----CCCCcCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhcc
Confidence 34455678999999999 888888 8999973 2469999999997 37999999999999987 54
Q ss_pred -----------------ccccCCCCCCeEEccCCcCCCcCCh--hHhhcCCCCcEEEcccCCCCCCCCccC-cCCCCCcE
Q 040267 74 -----------------ESLQSCKSLQVLNLSTNNLFGKIPT--QLCKWFPYLVSLDLSNNDLSGTIPHEL-GNCVYLNT 133 (538)
Q Consensus 74 -----------------~~~~~l~~L~~L~Ls~N~l~g~ip~--~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~ 133 (538)
..|+.+++|++|+|++|.++|.+|. .++. +++|++|+|++|.+++.+|..+ ..+++|++
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred CcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 4677888899999999999888888 7777 8889999999998888888765 77888888
Q ss_pred eeecCccccCCCCcc---ccCCccccEEecccccCCCCCC
Q 040267 134 LYLSYNRLSGPLPPQ---LSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 134 L~ls~N~l~g~~p~~---l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|+|++|++++..|.. +.++++|++|++++|.+++.+|
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 195 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD 195 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC
Confidence 888888887766655 5555555555555555555444
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.82 E-value=2.7e-21 Score=194.23 Aligned_cols=172 Identities=21% Similarity=0.309 Sum_probs=142.6
Q ss_pred CCCChhhHHHHHHhh-cC-CCCCCCCCCCCCCCCCCCCCCcccccccCC-------CCCCCEEEEEcCCCCccccCcccc
Q 040267 6 TATAEDDVKCLAGIK-SF-NDPQGKLSSWSLTNSSVGFICRFNGVSCWN-------GLENRILSLELEEMNLSGQVPESL 76 (538)
Q Consensus 6 ~~~~~~~~~~l~~~~-~~-~~~~~~l~~W~~~~~~~~~~c~w~gv~C~~-------~~~~~l~~L~L~~n~l~g~~p~~~ 76 (538)
+++..++..+|+.|| .+ .++.+.+++|..+.....++|.|.|+.|.. ....+|+.|+|++|+++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 345568899999999 56 577666788953222345789999999952 12367999999999998 888889
Q ss_pred cCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccC-----
Q 040267 77 QSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSS----- 151 (538)
Q Consensus 77 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~----- 151 (538)
+.+++|++|+|++|.++ .+|..+.. +++|++|+|++|.++ .+|..++.+++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~-l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQ-FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGG-GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhc-cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 99999999999999999 89988877 999999999999998 88999999999999999999999999987765
Q ss_pred ----CccccEEecccccCCCCCCcccccccccccc
Q 040267 152 ----LVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 152 ----l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+++|+.|++++|.++ .+|..+..+++|..+
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L 211 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSL 211 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEE
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEE
Confidence 889999999999998 788877777666544
No 259
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.4e-19 Score=175.34 Aligned_cols=130 Identities=15% Similarity=0.113 Sum_probs=105.1
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCE--EEEEEccccccc-------------------------HHHHHHHHHHHhcCC
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSM--LAIKRLSACKLG-------------------------EKQFLLEMKQVGLLK 333 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 333 (538)
|...+.||+|+||.||+|.. .+|+. ||||.++..... ...+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999996 68888 999987542111 135789999999998
Q ss_pred CCCC---------cccEEEeecCC-C----CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCccccCCCCC
Q 040267 334 HPNL---------EKPLVYKYMSN-G----TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-HCCHPPCLHQNISSS 398 (538)
Q Consensus 334 H~ni---------~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~ 398 (538)
|+++ ..++||||+.+ | +|.++... .++..+..++.|++.||.||| + .+|+||||||+
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~---~givHrDlkp~ 200 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQE---AELVHADLSEY 200 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHT---SCEECSSCSTT
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHH
Confidence 8765 34699999942 4 77776543 235567899999999999999 8 99999999999
Q ss_pred CeeeCCCCCeEEEeccCCcccCC
Q 040267 399 VILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 399 NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||+++ .++|+|||+|.....
T Consensus 201 NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp SEEESS--SEEECCCTTCEETTS
T ss_pred HEEEcC--cEEEEECcccccCCC
Confidence 999998 999999999987643
No 260
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=7.9e-19 Score=166.87 Aligned_cols=141 Identities=22% Similarity=0.305 Sum_probs=122.7
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|+|.+|.|.+. ....++.|+|++|++++..|..|..+++|+.|+|++|+|+ .+|...+..+++|++|+
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEE
Confidence 45799999999752 2357899999999999998999999999999999999997 67766544599999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+.+|..+
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 9999999776777899999999999999999 799999999999999999999998777777766655543
No 261
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.76 E-value=4.5e-19 Score=198.32 Aligned_cols=137 Identities=34% Similarity=0.551 Sum_probs=128.3
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCc
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (538)
.++++.|.++|.+|..++.+++|+.|||++|+|+|.+|..++. ++.|+.|+|++|+++|.+|..++++++|+.|||++|
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~-l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc-cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 3566778999999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred cccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCCCCCCCCCCC
Q 040267 140 RLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGGANLGSKCCD 198 (538)
Q Consensus 140 ~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~~~~~~~c~~ 198 (538)
+++|.+|..+.++++|++|++++|+|+|.+|.. |..+....+.+|+.+||.+.. .|..
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 999999999999999999999999999999964 677888899999999998876 7864
No 262
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=3.4e-18 Score=161.39 Aligned_cols=148 Identities=20% Similarity=0.229 Sum_probs=125.9
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|..|.|.+. ....++.|+|++|++++..+..|..+++|+.|+|++|.+++..|..+.. +++|++|+
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~ 86 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG-LRSLNSLV 86 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTT-CSSCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhC-CcCCCEEE
Confidence 45578999999752 1347899999999999888889999999999999999999777887776 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc---ccccccCC
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD---MLADSRLG 188 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~~~~l~ 188 (538)
|++|+++...+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|.|++..+..|..+++|. +.+|+..|
T Consensus 87 Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 87 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999999955555678999999999999999998899999999999999999999988887777665544 44454444
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.75 E-value=8.6e-18 Score=157.10 Aligned_cols=142 Identities=22% Similarity=0.273 Sum_probs=119.6
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|.+|.|... ...+++.|+|++|++++..+..|..+++|++|+|++|+++ .+|...+..+++|++|+
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEE
Confidence 34589999999752 1347999999999999777777899999999999999999 55655444499999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..+..+..+++|++|+|++|++++..+..|..+++|+.|++++|.+++..+..+..+++|..+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 153 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI 153 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEE
Confidence 99999996666678999999999999999997777778999999999999999998777667666655443
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=5.2e-18 Score=160.17 Aligned_cols=142 Identities=18% Similarity=0.167 Sum_probs=122.7
Q ss_pred CCCCcccccccCCCC--------CCCEEEEEcCCCCccccCc-ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEE
Q 040267 40 GFICRFNGVSCWNGL--------ENRILSLELEEMNLSGQVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSL 110 (538)
Q Consensus 40 ~~~c~w~gv~C~~~~--------~~~l~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L 110 (538)
.+.|.|..+.|.+.. ...++.|+|++|+|++..| ..|..+++|+.|+|++|.|++..|..+.. +++|++|
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~L 86 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG-ASGVNEI 86 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTT-CTTCCEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCC-CCCCCEE
Confidence 445789999997521 2457899999999998865 45899999999999999999655556665 9999999
Q ss_pred EcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 111 ~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..|..|..+.+|..+
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 158 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTL 158 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEE
Confidence 999999998878889999999999999999999889999999999999999999999989888776665543
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.4e-17 Score=153.65 Aligned_cols=130 Identities=21% Similarity=0.206 Sum_probs=95.8
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcc-cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSL 110 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L 110 (538)
.+.|.|..+.|.+. ....++.|+|++|++++..+. .|+.+++|++|+|++|.|++..|..+.. +++|++|
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L 83 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG-ASHIQEL 83 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCC-cccCCEE
Confidence 34578888888642 123677788888887765554 3777788888888888887666666665 7778888
Q ss_pred EcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 111 ~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|++|++++|.+++..+
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 888888877777777778888888888888887777777777888888888887777654
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=2.6e-17 Score=158.65 Aligned_cols=126 Identities=22% Similarity=0.246 Sum_probs=102.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..+..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD-LTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc-CCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 46888999999998888888888999999999999998665555555 88899999999999876667788888999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|+|++..|..|..+++|+.|+|++|.|++..+..|..+++|..+
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 160 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTL 160 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEE
Confidence 99998886666667888888999999998887777667666655543
No 267
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=4.8e-17 Score=147.93 Aligned_cols=130 Identities=21% Similarity=0.207 Sum_probs=107.4
Q ss_pred CCCCcccccccCCCC--------CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNGL--------ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|.++.|.+.. ...++.|+|++|++++..+..|..+++|++|+|++|+++ .+|...+..+++|++|+
T Consensus 4 ~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILY 82 (177)
T ss_dssp TCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEE
Confidence 345899999997521 347899999999999777777899999999999999998 45544333489999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997666678899999999999999996555567889999999999999998766
No 268
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.68 E-value=1.6e-16 Score=154.77 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=100.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..|..+++|++|+|++|.++ .+|..++..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 35788899988888776778888999999999999988 66666554588899999999988866666778888888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|.+++..|..|..+++|++|++++|.+++..+..|..+++|..+
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccccee
Confidence 88888887777778888888888888888887666666666555543
No 269
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.66 E-value=1.6e-16 Score=173.28 Aligned_cols=158 Identities=22% Similarity=0.211 Sum_probs=116.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc----ccccCC--------CCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc
Q 040267 24 DPQGKLSSWSLTNSSVGFICRFN----GVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN 91 (538)
Q Consensus 24 ~~~~~l~~W~~~~~~~~~~c~w~----gv~C~~--------~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~ 91 (538)
|+...+++|..+.+....+|.+. .|.|.+ +.+..++.|||++|+|++..|.+|.++++|++|+|++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 44445666665443333456542 367864 224578999999999998888899999999999999999
Q ss_pred CCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC-CCC
Q 040267 92 LFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG-RIP 170 (538)
Q Consensus 92 l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g-~~p 170 (538)
|++ +|+..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|++++|.+++ .+|
T Consensus 88 i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 88 IQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 994 555434449999999999999997666789999999999999999997767789999999999999999976 467
Q ss_pred cccccccccccc
Q 040267 171 SFFNGAMKMDML 182 (538)
Q Consensus 171 ~~~~~~~~l~~~ 182 (538)
..+..+++|+.+
T Consensus 167 ~~~~~l~~L~~L 178 (635)
T 4g8a_A 167 EYFSNLTNLEHL 178 (635)
T ss_dssp GGGGGCTTCCEE
T ss_pred hhhccchhhhhh
Confidence 777776666544
No 270
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.66 E-value=4.5e-17 Score=162.27 Aligned_cols=136 Identities=27% Similarity=0.397 Sum_probs=83.5
Q ss_pred CEEEEEcCCCCccccCcccccCCC-CCCeEEccCCcCCCcCChhHhh----------------------cCCCCcEEEcc
Q 040267 57 RILSLELEEMNLSGQVPESLQSCK-SLQVLNLSTNNLFGKIPTQLCK----------------------WFPYLVSLDLS 113 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~----------------------~l~~L~~L~Ls 113 (538)
+++.|+|++|.++|.+|..++.++ +|+.|+|++|.++|.+|..+.. .+++|+.|+|+
T Consensus 150 ~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 455566666666655665555555 5555555555555555544433 15555555555
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCCCC
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGGAN 191 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~~~ 191 (538)
+|.+++.+|. +..+++|++|+|++|+++|.+|..+..+++|+.|++++|+++|.+|.. +.++..+.+.+|+.+||.|
T Consensus 230 ~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp SSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 5555544443 556666777777777777777777777777777777777777777754 2334445566777777765
Q ss_pred CC
Q 040267 192 LG 193 (538)
Q Consensus 192 ~~ 193 (538)
..
T Consensus 309 ~~ 310 (313)
T 1ogq_A 309 LP 310 (313)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 271
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=4.2e-16 Score=143.84 Aligned_cols=116 Identities=28% Similarity=0.362 Sum_probs=81.1
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCc
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (538)
.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..+.. +++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~-l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGG-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhc-ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 3555566666 4555442 57777888888777 67766655 777888888888887666667777788888888888
Q ss_pred cccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 140 RLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 140 ~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+|++..|..|.++++|+.|+|++|.|++..+..|..+.+|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS 129 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcccc
Confidence 88776666777777888888888887765555555444433
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.64 E-value=4.1e-16 Score=156.36 Aligned_cols=123 Identities=21% Similarity=0.248 Sum_probs=83.1
Q ss_pred CCEEEEEcCCCCccccCcccccC---------CCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQS---------CKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.+++.|+|++|++.+.+|..++. +++|++|+|++|.++ .+|..+.. +++|++|+|++|.++ .+|..++
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN-LQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG-CTTCCEEEEESSCCC-CCCGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC-CCCCCEEEccCCCCC-cCchhhc
Confidence 35677777777777677666543 677777777777776 66666655 677777777777776 3555666
Q ss_pred CCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
.+++|++|+|++|++.+.+|..+.++++|+.|++++|++.+.+|..+.++++|..
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 281 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEK 281 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCE
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCE
Confidence 7777777777777777777777777777777777777777777766655555443
No 273
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.63 E-value=1.3e-15 Score=146.74 Aligned_cols=126 Identities=20% Similarity=0.188 Sum_probs=109.8
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..+..+..+++|++|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDH-LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcc-cCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 57999999999999988888999999999999999999544444444 99999999999999976666789999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|+|++..|..|..+++|+.|+|++|.|++..+..+..+++|..+
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 99999997667789999999999999999998888777766665543
No 274
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=4.2e-16 Score=157.31 Aligned_cols=137 Identities=12% Similarity=0.063 Sum_probs=103.9
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---------------cHH--------HHHHHHHHHh
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---------------GEK--------QFLLEMKQVG 330 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---------------~~~--------~~~~E~~~l~ 330 (538)
.+...-.-|...+.||.|++|.||+|...+|+.||||+++.... ... ...+|...|.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33343334888899999999999999988999999998753210 001 1245777888
Q ss_pred cCCCCCC---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCee
Q 040267 331 LLKHPNL---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401 (538)
Q Consensus 331 ~l~H~ni---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 401 (538)
++.+.++ ..+|||||+++++|.++... .....++.|++.+|.|||+ .+||||||||.|||
T Consensus 169 rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NIL 237 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAK---HGLIHGDFNEFNIL 237 (397)
T ss_dssp HHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEE
T ss_pred HHHhcCCCCCeeeeccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEE
Confidence 8866655 23599999999888765321 2345788999999999999 89999999999999
Q ss_pred eCCCCC----------eEEEeccCCcccCC
Q 040267 402 VDEDFD----------ARIMDFGFSRLTNG 421 (538)
Q Consensus 402 l~~~~~----------~kl~Dfg~a~~~~~ 421 (538)
+++++. +.|+||+-+.....
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred EeCCCCcccccccccceEEEEeCCcccCCC
Confidence 987763 89999997765543
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.62 E-value=2.2e-15 Score=146.88 Aligned_cols=124 Identities=22% Similarity=0.212 Sum_probs=74.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..++.+++|++|+|++|++++..|..+.. +++|++|+|++|++++..|..++.+++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDK-LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhcc-CCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 34666666666666555555666666666666666666433333333 66666666666666655455556666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..|..+..+++|+.|++++|.+++..|..+..+++|.
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 208 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCC
Confidence 666666655555556666666666666666665555554444433
No 276
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=1.8e-16 Score=139.73 Aligned_cols=124 Identities=22% Similarity=0.244 Sum_probs=109.1
Q ss_pred CCEEEEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+.. +++|++|+|++|.+++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPK-LNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCC-CTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhc-CCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 56899999999999 89999999999999999999999955 55555 9999999999999998899888889999999
Q ss_pred eecCccccCC-CCccccCCccccEEecccccCCCCCC---cccccccccccc
Q 040267 135 YLSYNRLSGP-LPPQLSSLVRLKQFSVAYNCLSGRIP---SFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~-~p~~l~~l~~L~~l~l~~N~l~g~~p---~~~~~~~~l~~~ 182 (538)
++++|.+++. .|..+..+++|+.|++++|.+++..+ ..+..+++|..+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 145 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEE
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccc
Confidence 9999999973 45889999999999999999998766 467777776655
No 277
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.62 E-value=1.4e-15 Score=140.23 Aligned_cols=120 Identities=22% Similarity=0.300 Sum_probs=105.9
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChh-HhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQ-LCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
+.|++++|+|+ .+|..+.. +|++|+|++|++++..|.. +.. +++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGR-LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGG-CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCcccccc-CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 67999999996 77876644 9999999999999655544 555 9999999999999999989999999999999999
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEE
Confidence 999999888889999999999999999999999888777666544
No 278
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.61 E-value=1.5e-15 Score=143.14 Aligned_cols=114 Identities=12% Similarity=0.127 Sum_probs=105.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+|++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..|..+++|++|+
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKG-LESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTT-CSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcC-CcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 57999999999999888889999999999999999999655555555 99999999999999998899999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|++++..|..|..+++|+.|++++|.+++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999999889999999999999999999997655
No 279
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.61 E-value=1.6e-15 Score=154.21 Aligned_cols=134 Identities=24% Similarity=0.211 Sum_probs=113.8
Q ss_pred CCCCCcccccccCCC--------CCCCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhhcCCCCcE
Q 040267 39 VGFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS 109 (538)
Q Consensus 39 ~~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~ 109 (538)
..+.|.+.-+.|.+. ....++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..+.. +++|++
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~ 92 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP-VPNLRY 92 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT-CTTCCE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC-CCCCCE
Confidence 345578888999752 234588999999999988888887 9999999999999999555555655 999999
Q ss_pred EEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccc
Q 040267 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 110 L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|.|++..+..|
T Consensus 93 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 93 LDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred EECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHh
Confidence 9999999997777789999999999999999998888999999999999999999997555555
No 280
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.61 E-value=9.8e-16 Score=160.52 Aligned_cols=142 Identities=18% Similarity=0.217 Sum_probs=121.0
Q ss_pred CCCcccc--cccCCC-------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 41 FICRFNG--VSCWNG-------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 41 ~~c~w~g--v~C~~~-------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
..|.|.+ |.|.+. .+.+++.|+|++|++++..|..|+++++|++|+|++|.+.+.+|...+..+++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3466655 788652 2357999999999999988999999999999999999999888765445599999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCcc--ccCCccccEEecccccCCCCCCcc-cccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ--LSSLVRLKQFSVAYNCLSGRIPSF-FNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~--l~~l~~L~~l~l~~N~l~g~~p~~-~~~~~~l~~~ 182 (538)
|++|++++..|..++.+++|++|+|++|++++.+|.. +.++++|+.|++++|.+++..|.. +.++++|..+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 159 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVL 159 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEE
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEE
Confidence 9999999888999999999999999999999866655 999999999999999999988865 6666666554
No 281
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=3.9e-15 Score=137.36 Aligned_cols=127 Identities=24% Similarity=0.275 Sum_probs=110.7
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|..+.|.+. ....++.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..|..+.. +++|++|+
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~-l~~L~~L~ 84 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSN-MTQLLTLI 84 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEE
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccC-CCCCCEEE
Confidence 34578888999752 2357999999999998 78899999999999999999999655555655 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|.+...
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999999988888899999999999999999976666799999999999999998753
No 282
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=1e-15 Score=137.78 Aligned_cols=126 Identities=23% Similarity=0.231 Sum_probs=105.1
Q ss_pred CCCEEEEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcE
Q 040267 55 ENRILSLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 133 (538)
..+++.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. ..+.. +++|++|+|++|++++.+|..+..+++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPK-LPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCC-CSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhcc-CCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 357899999999998 88898889999999999999999854 45555 899999999999999878888888999999
Q ss_pred eeecCccccCCC-CccccCCccccEEecccccCCCCCC---ccccccccccccc
Q 040267 134 LYLSYNRLSGPL-PPQLSSLVRLKQFSVAYNCLSGRIP---SFFNGAMKMDMLA 183 (538)
Q Consensus 134 L~ls~N~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~~p---~~~~~~~~l~~~~ 183 (538)
|+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|..+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 999999998632 2788999999999999999997665 4666666666553
No 283
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=1.7e-15 Score=162.69 Aligned_cols=139 Identities=24% Similarity=0.271 Sum_probs=117.2
Q ss_pred CCcccccccCCC----------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 42 ICRFNGVSCWNG----------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 42 ~c~w~gv~C~~~----------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.|.|.|+ |+.. ...+++.|+|++|++++..|..|.++++|++|+|++|++++..|..+.. +++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS-LGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc-cccCCEEE
Confidence 4888888 7531 1347999999999999988999999999999999999999777777776 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccC-CCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
|++|++++..|..++.+++|++|+|++|.+++ .+|..+.++++|+.|++++|.+.+.+| ..+.++++|+.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 99999997777779999999999999999997 467889999999999999998666665 567777666554
No 284
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.58 E-value=7.3e-15 Score=144.05 Aligned_cols=127 Identities=23% Similarity=0.224 Sum_probs=108.8
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC-CCCCCCccCcCCCCCcE
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND-LSGTIPHELGNCVYLNT 133 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~ 133 (538)
...++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|. ++...|..+..+++|++
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTG-LALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCC-ccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 457899999999999877788999999999999999999766777766 8999999999997 77666888999999999
Q ss_pred eeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 134 L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++|.+++..|..+.++++|++|++++|.+++..+..+..+++|..+
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 9999999998778889999999999999999998777767766665544
No 285
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=4.8e-15 Score=161.16 Aligned_cols=127 Identities=19% Similarity=0.220 Sum_probs=110.2
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..|+++++|++|
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHG-LHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhc-hhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 457899999999999888889999999999999999999666766666 8999999999999998889999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCC-CCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG-RIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g-~~p~~~~~~~~l~~~ 182 (538)
+|++|.+++..|..+.++++|++|++++|.+++ .+|..+.++++|+.+
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 158 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHV 158 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEE
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEE
Confidence 999999997777889999999999999999986 678888877776654
No 286
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.58 E-value=4.9e-15 Score=139.63 Aligned_cols=112 Identities=22% Similarity=0.253 Sum_probs=103.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|.|+ .+|...+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 57999999999999999999999999999999999999 77777655599999999999999988899999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|+|++..+..|..+++|+.|++++|.+...
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999999987778899999999999999999764
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.57 E-value=1e-14 Score=142.24 Aligned_cols=127 Identities=21% Similarity=0.187 Sum_probs=109.6
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+..++.|+|++|++++..+..|.++++|++|+|++|.+++..+..+.. +++|++|+|++|.+++..|..+..+++|++|
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccC-CcCCCEEECCCCccCccChhhhcCCccccEE
Confidence 346899999999999887778999999999999999999555555555 8999999999999998888889999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCC-CCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR-IPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~~~ 182 (538)
++++|++++..+..+..+++|+.|++++|.+++. +|..+..+++|+.+
T Consensus 106 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred ECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 9999999977776899999999999999999874 68888877776655
No 288
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.57 E-value=5e-15 Score=156.20 Aligned_cols=138 Identities=21% Similarity=0.181 Sum_probs=116.8
Q ss_pred cccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccC
Q 040267 44 RFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115 (538)
Q Consensus 44 ~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N 115 (538)
.|..|.|.+. .+..++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.. +++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN-LFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC-CccCCEEECCCC
Confidence 3678888642 2357899999999999888889999999999999999999777877776 999999999999
Q ss_pred CCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 116 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++++..+..|..+++|++|+|++|.+++..|..|.++++|+.|++++|.+++..|..|.++.+|..+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 157 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQL 157 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEE
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEE
Confidence 9986555568899999999999999998888889999999999999999988888777776665544
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.57 E-value=2.9e-15 Score=148.46 Aligned_cols=141 Identities=22% Similarity=0.216 Sum_probs=118.0
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCC--CcCChhHhhcCCCCcE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLF--GKIPTQLCKWFPYLVS 109 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~~l~~L~~ 109 (538)
.+.|.|.+|.|.+. ....++.|+|++|+++...+..|..+++|++|+|++|.++ |.+|..+.. +++|++
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~~~L~~ 82 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFG-TTSLKY 82 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHS-CSCCCE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccc-ccccCE
Confidence 34589999999752 2357999999999999554556899999999999999998 334677776 899999
Q ss_pred EEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCC-ccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 110 L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..+..+++|+.+
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 999999998 688889999999999999999996554 578999999999999999998888877776666544
No 290
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.56 E-value=2.1e-14 Score=139.68 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=80.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.++ .+|...+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 35777777777777544455567777777777777777 34433333367777777777777765556667777777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|..
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 7777777544455666777777777777777655555555444443
No 291
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.55 E-value=9e-15 Score=153.16 Aligned_cols=126 Identities=19% Similarity=0.225 Sum_probs=113.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++.+|..++.+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG-LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC-cccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 46899999999999999999999999999999999999777777776 99999999999999988889999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..|..|..+++|++|++++|++++..+..+..+++|..+
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 400 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKI 400 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEE
Confidence 99999998889999999999999999999998777666666555443
No 292
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.55 E-value=6e-15 Score=149.36 Aligned_cols=140 Identities=26% Similarity=0.289 Sum_probs=115.2
Q ss_pred CCCCcccccccCC----------CCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcE
Q 040267 40 GFICRFNGVSCWN----------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS 109 (538)
Q Consensus 40 ~~~c~w~gv~C~~----------~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~ 109 (538)
...|.|.|+ |+- ....+++.|+|++|++++..+..|.++++|+.|+|++|.+++..|..+.. +++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS-LGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCC-CCCCCE
Confidence 457999987 542 11347999999999999877778999999999999999999766666766 999999
Q ss_pred EEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCc--cccCCccccEEeccccc-CCCCCCcccccccccccc
Q 040267 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPP--QLSSLVRLKQFSVAYNC-LSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 110 L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~l~~l~~L~~l~l~~N~-l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++|++++..+..++.+++|++|+|++|++++ +|. .+..+++|+.|++++|+ +++..|..+.++++|+.+
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 9999999995444458999999999999999995 555 78999999999999994 666666777777666554
No 293
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.55 E-value=9.2e-15 Score=143.36 Aligned_cols=125 Identities=20% Similarity=0.209 Sum_probs=83.9
Q ss_pred CCEEEEEcCCCC-ccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMN-LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|. +++..|..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..+..++.+++|++|
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG-LAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhC-CcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 457777777776 65555666777777777777777777555555544 7777777777777775555556777777777
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
+|++|++++..+..|..+++|+.|++++|.+++..|..+..+++|..
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 77777777544455677777777777777777666666665555443
No 294
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.55 E-value=2.1e-14 Score=139.94 Aligned_cols=124 Identities=22% Similarity=0.214 Sum_probs=108.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++. +.+..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..++.+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK-LTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcC-CcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5699999999999973 47899999999999999999655554555 99999999999999977777799999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..|..+..+++|+.|++++|.+++..+..+..+++|..+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 99999998777778999999999999999998888777776666544
No 295
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.54 E-value=2.3e-14 Score=158.00 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=109.3
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+.+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..+..|+.+++|++|
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 357999999999999888888999999999999999999877877777 9999999999999985444469999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++|++++..|..|.++++|++|++++|.+++..|..+.++++|+.+
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 150 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEE
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEE
Confidence 999999997777889999999999999999998888877766665544
No 296
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.54 E-value=2.1e-14 Score=141.27 Aligned_cols=120 Identities=27% Similarity=0.273 Sum_probs=74.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..|..|..+++|+.|+|++|.+++ +|.. .. +++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~-l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GT-LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SC-CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CC-CCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 457777777777777767777777777777777777763 3332 22 566666666666665 5565666666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
|++|++++..|..|.++++|+.|++++|+|++..+..|..+++|
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 150 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCC
Confidence 66666665444556666666666666666665544444444433
No 297
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2.4e-14 Score=129.20 Aligned_cols=108 Identities=22% Similarity=0.224 Sum_probs=93.2
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecC
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (538)
+.|++++|+|+ .+|..+ .++|+.|+|++|+|++..|..+.. +++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~-l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDR-LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcC-cccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 45777788888 477665 389999999999999776777766 99999999999999976666789999999999999
Q ss_pred ccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 139 NRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 139 N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99997667779999999999999999997654
No 298
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.53 E-value=3.3e-14 Score=132.59 Aligned_cols=114 Identities=24% Similarity=0.214 Sum_probs=99.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.++ .+|...+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 57999999999999777777899999999999999999 45554433499999999999999977666789999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|++++..+..+..+++|+.|++++|.+.+..|
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999997666678999999999999999988766
No 299
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.53 E-value=1.9e-14 Score=162.42 Aligned_cols=136 Identities=19% Similarity=0.186 Sum_probs=104.8
Q ss_pred CcccccccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCC
Q 040267 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP 122 (538)
Q Consensus 43 c~w~gv~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p 122 (538)
|+|+.|.+ .+.+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+++..+..+++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 56777777 256789999999999888888888888888888888877777744333348888888888888887778
Q ss_pred ccCcCCCCCcEeeecCccccCCCCcc--ccCCccccEEecccccCCCCCC-ccccccccccc
Q 040267 123 HELGNCVYLNTLYLSYNRLSGPLPPQ--LSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDM 181 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~~p~~--l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~ 181 (538)
..|+.+++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|.++++|+.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~ 152 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKS 152 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCE
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCE
Confidence 88888888888888888888766654 7788888888888888877654 45666555543
No 300
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.52 E-value=4.8e-14 Score=138.71 Aligned_cols=121 Identities=29% Similarity=0.334 Sum_probs=71.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ . +.+++|++|+|++|.|+ .+|..+.. +++|++|+|++|++++..|..|..+++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~-l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQT-LPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTT-CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhcc-CCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 356666666666664322 2 55666666666666666 55655444 66666666666666654445566666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|.
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 175 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCC
Confidence 666666654445556666666666666666654444444444433
No 301
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.52 E-value=1.6e-14 Score=155.15 Aligned_cols=109 Identities=27% Similarity=0.278 Sum_probs=101.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|..++. +++|+.|+|++|+|++ +| .++.+++|++|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA-LRCLEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc-CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 47889999999997 676 999999999999999999 99999887 9999999999999996 78 8999999999999
Q ss_pred cCccccCCC-CccccCCccccEEecccccCCCCCCc
Q 040267 137 SYNRLSGPL-PPQLSSLVRLKQFSVAYNCLSGRIPS 171 (538)
Q Consensus 137 s~N~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~~p~ 171 (538)
++|+|++.. |..+..+++|+.|+|++|.|++.+|.
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 999999876 99999999999999999999987664
No 302
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.52 E-value=1.5e-14 Score=147.02 Aligned_cols=132 Identities=21% Similarity=0.199 Sum_probs=109.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..+.. +++|++|+|++|++++..|..|..+++|+.|+
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD-LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCC-CcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 57999999999999888889999999999999999999444444444 99999999999999988899999999999999
Q ss_pred ecCccccCCCCcc-c---cCCccccEEecccccCCCCCCcccccccc-----ccccccccCCC
Q 040267 136 LSYNRLSGPLPPQ-L---SSLVRLKQFSVAYNCLSGRIPSFFNGAMK-----MDMLADSRLGG 189 (538)
Q Consensus 136 ls~N~l~g~~p~~-l---~~l~~L~~l~l~~N~l~g~~p~~~~~~~~-----l~~~~~~~l~~ 189 (538)
|++|+|++ +|.. | ..+++|+.|+|++|+|++..+..+..+.. +.+.+|+..|.
T Consensus 143 L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 143 LSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99999996 5554 4 57999999999999999766566665543 44555655553
No 303
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=1.6e-14 Score=156.84 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=86.1
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.+..|++++|.+++..+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..|+.+++|++|+|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcC-CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4566777777776555555677777777777777777555555555 777777777777777666666777777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++|.|++..|..|.++++|++|++++|.+++..|..+.++++|..+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 7777775444445777777777777777777766666665555443
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.52 E-value=2e-14 Score=142.43 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=62.8
Q ss_pred CEEEEEcCCCCccccCc-ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCC-CCCccCcCCCCCcEe
Q 040267 57 RILSLELEEMNLSGQVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG-TIPHELGNCVYLNTL 134 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 134 (538)
+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++ .+|..+..+++|++|
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc-CcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 45555555555554433 34555555555555555555444444433 5555555555555554 345555555555555
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 177 (538)
+|++|.+++..|..+..+++|+.|++++|.+++..+..+..++
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 5555555554455555555555555555555544443443333
No 305
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.51 E-value=3.7e-15 Score=162.96 Aligned_cols=124 Identities=22% Similarity=0.426 Sum_probs=104.1
Q ss_pred CCEEEEEcCCCCcccc-----------------Cccccc--CCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC
Q 040267 56 NRILSLELEEMNLSGQ-----------------VPESLQ--SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 116 (538)
.+++.|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|..++. +++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCC
Confidence 5688899999999886 888888 8999999999999988889988877 8889999999998
Q ss_pred -CCC-CCCccCcCC------CCCcEeeecCccccCCCCc--cccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 117 -LSG-TIPHELGNC------VYLNTLYLSYNRLSGPLPP--QLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 117 -l~g-~~p~~~~~l------~~L~~L~ls~N~l~g~~p~--~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++| .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|+.|++++|.++|.+| .+..+++|..+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L 358 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASL 358 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEE
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEE
Confidence 888 788887776 88888888888888 7888 88888888888888888888888 66666555443
No 306
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=5e-14 Score=127.56 Aligned_cols=107 Identities=19% Similarity=0.177 Sum_probs=93.0
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecC
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (538)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..+.. +++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDH-LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcC-CcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 67899999996 7787664 89999999999999777777766 99999999999999965555679999999999999
Q ss_pred ccccCCCCccccCCccccEEecccccCCCCC
Q 040267 139 NRLSGPLPPQLSSLVRLKQFSVAYNCLSGRI 169 (538)
Q Consensus 139 N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~ 169 (538)
|+|++..+..|..+++|+.|+|++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999755566999999999999999998643
No 307
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.51 E-value=4.3e-14 Score=134.04 Aligned_cols=113 Identities=22% Similarity=0.206 Sum_probs=100.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+|++..+..|..+++|+.|+|++|.|+ .+|...+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 57999999999998666677899999999999999999 455554444999999999999999 8999999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|+|++..+..|..+++|+.|++++|.+++..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999997666789999999999999999997654
No 308
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=9.2e-15 Score=161.76 Aligned_cols=116 Identities=26% Similarity=0.427 Sum_probs=100.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..+.. +++|++|+|++|+|+ .+|..|+.|++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKN-LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGG-GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhC-CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 45778999999988 78888888999999999999998 88988876 899999999999998 8898999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
|++|.|+ .+|..|.+|++|+.|+|++|.|+|.+|..+...
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 9999997 788889999999999999999998888777543
No 309
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.51 E-value=6.7e-14 Score=140.39 Aligned_cols=133 Identities=23% Similarity=0.292 Sum_probs=114.0
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
++.|.|..+.|.+. ....++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.. +++|++|+
T Consensus 30 ~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 108 (332)
T 2ft3_A 30 GCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSP-LRKLQKLY 108 (332)
T ss_dssp SCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTT-CTTCCEEE
T ss_pred CCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhC-cCCCCEEE
Confidence 34578999999752 1347899999999999888889999999999999999999777877776 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCC--CCCCcccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS--GRIPSFFNGA 176 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~--g~~p~~~~~~ 176 (538)
|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++ +..|..+..+
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 172 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL 172 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC
Confidence 9999998 7887765 89999999999999766677999999999999999996 3666666654
No 310
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.50 E-value=3.7e-14 Score=138.30 Aligned_cols=124 Identities=18% Similarity=0.187 Sum_probs=109.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|++++|++++..+..++.+++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG-LSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC-CccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 57999999999999888888999999999999999999666666666 99999999999999977777899999999999
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.+++ .+|..+.++++|+.|++++|.+++..+..+..+.++.
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999987 4799999999999999999999988777776665544
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=2.1e-14 Score=151.85 Aligned_cols=132 Identities=20% Similarity=0.111 Sum_probs=105.6
Q ss_pred CcccccccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCC
Q 040267 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP 122 (538)
Q Consensus 43 c~w~gv~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p 122 (538)
|.+.++.|.. ...++.|+|++|++++..|..++.+++|+.|+|++|.+++.+|..++..+++|++|+|++|.+++. |
T Consensus 109 N~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~ 185 (487)
T 3oja_A 109 NNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (487)
T ss_dssp SCCCCEEECC--CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CcCCCCCccc--cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c
Confidence 4556666643 356899999999999888888999999999999999999888888764489999999999999865 3
Q ss_pred ccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 123 HELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
.+..+++|++|+|++|.|++ +|+.+..+++|+.|++++|.|++ +|..+..+++|.
T Consensus 186 -~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~ 240 (487)
T 3oja_A 186 -GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLE 240 (487)
T ss_dssp -CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCC
T ss_pred -ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCC
Confidence 34468999999999999996 55568889999999999999986 566665554443
No 312
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.50 E-value=3.3e-14 Score=135.61 Aligned_cols=139 Identities=16% Similarity=0.219 Sum_probs=114.1
Q ss_pred CCCcc-cccc--cCC-----CCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc-CCCcCChhHhhcCCCCcEEE
Q 040267 41 FICRF-NGVS--CWN-----GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 41 ~~c~w-~gv~--C~~-----~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~~l~~L~~L~ 111 (538)
+.|.+ .++. |.+ ..+..++.|+|++|++++..+..|..+++|+.|+|++|. ++ .+|...+..+++|++|+
T Consensus 8 C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~ 86 (239)
T 2xwt_C 8 CECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIE 86 (239)
T ss_dssp CSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEE
T ss_pred CeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEE
Confidence 34543 5554 853 123579999999999998888899999999999999997 77 56654444499999999
Q ss_pred ccc-CCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcccc---EEecccc-cCCCCCCcccccccccc-cc
Q 040267 112 LSN-NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLK---QFSVAYN-CLSGRIPSFFNGAMKMD-ML 182 (538)
Q Consensus 112 Ls~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~---~l~l~~N-~l~g~~p~~~~~~~~l~-~~ 182 (538)
|++ |++++..+..|..+++|++|+|++|.+++ +|. +..+++|+ .|++++| .+++..+..|.++.++. .+
T Consensus 87 l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp EEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred CCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 999 99997666789999999999999999996 887 88888888 9999999 99987777787777666 44
No 313
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.49 E-value=7.1e-14 Score=140.03 Aligned_cols=139 Identities=20% Similarity=0.263 Sum_probs=118.8
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
++.|.|..+.|.+. ....++.|+|++|++++..+..|+++++|++|+|++|.+++..|..+.. +++|++|+
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 106 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP-LVKLERLY 106 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEEE
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC-CCCCCEEE
Confidence 45678999999742 2357899999999999888889999999999999999999777888876 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC--CCCcccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG--RIPSFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g--~~p~~~~~~~~l~~~ 182 (538)
|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+..+.++++|..+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 9999998 7787665 799999999999998777789999999999999999964 667777777766654
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.49 E-value=5.5e-14 Score=147.29 Aligned_cols=137 Identities=19% Similarity=0.204 Sum_probs=114.8
Q ss_pred ccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC
Q 040267 45 FNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116 (538)
Q Consensus 45 w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 116 (538)
|..|.|.+. .+..++.|+|++|++++..|..|.++++|+.|+|++|.+++..|..+.. +++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNG-LASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccC-cccCCEEECCCCc
Confidence 567888752 2357999999999999999999999999999999999999766666665 9999999999999
Q ss_pred CCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+++..+..+..+++|++|+|++|.+++..+..|.++++|+.|++++|+..+.+| ..|.++.+|..+
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 997666779999999999999999997666789999999999999965555555 456666665544
No 315
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.49 E-value=1.2e-13 Score=125.41 Aligned_cols=121 Identities=21% Similarity=0.251 Sum_probs=99.5
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
.+.+++++++++ .+|..+ .++|+.|+|++|++++..+..+.. +++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDK-LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcC-cccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 367999999998 456544 379999999999999544444444 9999999999999996666678999999999999
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++++..|..+..+++|+.|++++|.+++..+..+..+++|..+
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 129 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEE
Confidence 999998777778999999999999999997766666666555443
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.49 E-value=5.6e-14 Score=152.68 Aligned_cols=124 Identities=19% Similarity=0.126 Sum_probs=106.8
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+..++.|+|++|++++..|..|+++++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..++.+++|++|
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 110 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS-QHRLDTLVLTANPLIFMAETALSGPKALKHL 110 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCSEECTTTTSSCTTCCEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC-ccccCeeeCCCCcccccChhhhcccccccEe
Confidence 457899999999999888999999999999999999999777877776 9999999999999998889999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCC-CCcccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR-IPSFFNGAMKMD 180 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~ 180 (538)
+|++|.+++..|..+.++++|++|++++|.+++. +|..+. +++|+
T Consensus 111 ~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~ 156 (606)
T 3t6q_A 111 FFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLK 156 (606)
T ss_dssp ECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCC
T ss_pred eccccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccC
Confidence 9999999976678889999999999999999874 344332 44433
No 317
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.47 E-value=6.1e-14 Score=152.79 Aligned_cols=134 Identities=16% Similarity=0.165 Sum_probs=115.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC-cCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG-KIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..+..++++.|.+++..|..+..+++|+.|+|++|++.+ .+|..+.. +++|++|+|++|++++..|..|+.+++|++|
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~-l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh-ccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 467889999999999999999999999999999998654 45665555 9999999999999999999999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccc----ccccccccccCCCC
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA----MKMDMLADSRLGGA 190 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~----~~l~~~~~~~l~~~ 190 (538)
+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..+ ..+...+|+..|.+
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 999999999888899999999999999999999999887654 33445566666543
No 318
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.47 E-value=7.7e-14 Score=151.58 Aligned_cols=123 Identities=17% Similarity=0.204 Sum_probs=113.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG-LTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT-CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCC-cccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 57999999999999988999999999999999999999777888877 99999999999999977778899999999999
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
|++|.+++ .+|..|.++++|++|++++|.+++..|..+..+.++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 179 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLREN 179 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcc
Confidence 99999986 689999999999999999999999888888776654
No 319
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.46 E-value=1.7e-13 Score=148.66 Aligned_cols=127 Identities=20% Similarity=0.189 Sum_probs=109.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|+.+++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++..+..|+.+++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcC-CCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46899999999999988889999999999999999999766666666 99999999999999955555579999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLA 183 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 183 (538)
|++|.+++..|..|.++++|+.|++++|.+++..+..+.++..+.+.+
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 201 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhccc
Confidence 999999998898999999999999999999987555555555444433
No 320
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.46 E-value=1.6e-13 Score=143.23 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=113.3
Q ss_pred ccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC
Q 040267 45 FNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116 (538)
Q Consensus 45 w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 116 (538)
|..|.|.+. ....++.|+|++|++++..+..|.++++|+.|+|++|.+++..|..+.. +++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~-l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG-LANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTT-CSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccC-CccCCEEECCCCc
Confidence 567899752 2356899999999999988899999999999999999999555555555 9999999999999
Q ss_pred CCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+++..+..|..+++|++|+|++|.+++..+..|.++++|+.|++++|+..+.++ ..|.++.+|+.+
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 996666689999999999999999997667789999999999999965555555 456666665544
No 321
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=147.30 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=79.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..|.++++|++|+|++|++++..|..+.. +++|++|+|++|++++..|..|+.+++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccC-chhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 45666777777776666666667777777777777766444444444 66677777777766655556666666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCC-CCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG-RIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g-~~p~~~~~~~~l~~~ 182 (538)
|++|++++..+..+.++++|++|++++|.+++ .+|..+.++++|+.+
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 154 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEE
Confidence 66666664433356666666666666666665 356655555544433
No 322
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.45 E-value=6.6e-14 Score=154.92 Aligned_cols=106 Identities=31% Similarity=0.464 Sum_probs=93.5
Q ss_pred CcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccC
Q 040267 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSS 151 (538)
Q Consensus 72 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~ 151 (538)
.|..+..++.|+.|+|++|.+. .+|..++. +++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|.+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFK-YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGG-CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcC-CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 3667889999999999999999 89999987 999999999999999 99999999999999999999999 88999999
Q ss_pred CccccEEecccccCCCCCCcccccccccccc
Q 040267 152 LVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 152 l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++|+|++|.|+ .+|..|..+.+|..+
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 999999999999997 778888877776654
No 323
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.45 E-value=1.8e-13 Score=122.99 Aligned_cols=112 Identities=23% Similarity=0.220 Sum_probs=98.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC-CCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT-IPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.. +++|++|+|++|.+++. .+..+..+++|++|
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK-LPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHH-CTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhh-CCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 4699999999999976 78999999999999999999878887766 99999999999999853 22789999999999
Q ss_pred eecCccccCCCC---ccccCCccccEEecccccCCCCCCc
Q 040267 135 YLSYNRLSGPLP---PQLSSLVRLKQFSVAYNCLSGRIPS 171 (538)
Q Consensus 135 ~ls~N~l~g~~p---~~l~~l~~L~~l~l~~N~l~g~~p~ 171 (538)
+|++|.+++..+ ..+..+++|++|++++|.+.. +|.
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~ 164 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE-APD 164 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB-CCS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh-ccc
Confidence 999999996544 489999999999999999874 443
No 324
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=7.2e-14 Score=156.44 Aligned_cols=122 Identities=22% Similarity=0.330 Sum_probs=111.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc-CCC-cCChhHhhcCC-------CCcEEEcccCCCCCCCCc--c
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFG-KIPTQLCKWFP-------YLVSLDLSNNDLSGTIPH--E 124 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~ip~~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~ 124 (538)
.+++.|+|++|++.|.+|..|+++++|+.|+|++|+ |+| .+|..++. ++ +|++|+|++|+++ .+|. .
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~-L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR-LADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHH-HHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHh-hhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 569999999999999999999999999999999998 998 89988876 55 9999999999999 8998 8
Q ss_pred CcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccc-cccc
Q 040267 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK-MDML 182 (538)
Q Consensus 125 ~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~-l~~~ 182 (538)
++++++|+.|+|++|+++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |..+
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L 624 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGL 624 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEE
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEE
Confidence 999999999999999999 899 8999999999999999999 88887777666 5544
No 325
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.45 E-value=1.1e-13 Score=145.95 Aligned_cols=126 Identities=22% Similarity=0.210 Sum_probs=108.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++..|..|.++++|++|+|++|.++ .+|...+..+++|++|+|++|++++..|..+..+++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 56999999999999988999999999999999999998 56655444489999999999999988888999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|.+++..|..|.++++|+.|++++|.+++..+..+..+++|..+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 181 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 181 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEE
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEE
Confidence 99999998888899999999999999999997766666666655543
No 326
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.45 E-value=2.8e-14 Score=141.92 Aligned_cols=110 Identities=22% Similarity=0.261 Sum_probs=90.0
Q ss_pred CCEEEEEcCCCCccccCcccc--cCCCCCCeEEccCCcCCCcCChhHhhcC-----CCCcEEEcccCCCCCCCCccCcCC
Q 040267 56 NRILSLELEEMNLSGQVPESL--QSCKSLQVLNLSTNNLFGKIPTQLCKWF-----PYLVSLDLSNNDLSGTIPHELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l 128 (538)
.+++.|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..+.. + ++|++|+|++|++++..|..++.+
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~-l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE-LQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH-HHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH-HHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 468888888888888888876 8888899999999988866 776665 5 888999999999887777888888
Q ss_pred CCCcEeeecCccccCC--CCccc--cCCccccEEecccccCCC
Q 040267 129 VYLNTLYLSYNRLSGP--LPPQL--SSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~--~p~~l--~~l~~L~~l~l~~N~l~g 167 (538)
++|++|+|++|+++|. +|..+ ..+++|+.|++++|.+++
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 8999999999888765 34444 788888888888888884
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.44 E-value=1.5e-13 Score=127.06 Aligned_cols=119 Identities=12% Similarity=0.208 Sum_probs=77.6
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|+|++|+++ .+| .+..+++|++|++++|.++ . +..+.. +++|++|++++|.+++..|..++.+++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~-l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISG-LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTT-CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhc-CCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 4667777777776 445 4667777777777777554 2 234444 677777777777777666667777777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|.+++..|..+..+++|+.|++++|.+.+.+| .+..+++|..
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~ 163 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKS 163 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCE
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCE
Confidence 7777776666667777777777777776333444 3444444443
No 328
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.44 E-value=2.1e-13 Score=137.58 Aligned_cols=110 Identities=20% Similarity=0.190 Sum_probs=92.0
Q ss_pred CCcccccccCCCCCCCEEEEEcCCC-CccccCcccccCCCCCCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCC
Q 040267 42 ICRFNGVSCWNGLENRILSLELEEM-NLSGQVPESLQSCKSLQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119 (538)
Q Consensus 42 ~c~w~gv~C~~~~~~~l~~L~L~~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 119 (538)
.|.|..|.|. ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..+.. +++|++|+|++|+|++
T Consensus 7 ~C~~~~v~~~-------------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~-l~~L~~L~l~~N~l~~ 70 (347)
T 2ifg_A 7 PHGSSGLRCT-------------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRG-LGELRNLTIVKSGLRF 70 (347)
T ss_dssp CSSSSCEECC-------------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCS-CCCCSEEECCSSCCCE
T ss_pred cccCCEEEcC-------------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhcc-ccCCCEEECCCCccce
Confidence 3777777774 34 677 4788 99999999999996 9999555556655 9999999999999999
Q ss_pred CCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 120 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
..|..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|.|...
T Consensus 71 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 71 VAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp ECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred eCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 8898999999999999999999965555555555 99999999999864
No 329
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.44 E-value=2.1e-13 Score=137.92 Aligned_cols=125 Identities=19% Similarity=0.196 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc--cCcCCCCCcE
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH--ELGNCVYLNT 133 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 133 (538)
.+++.|+|++|++++..|..|.++++|++|+|++|.++ .+|...+..+++|++|+|++|+++ .+|. .+..+++|++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 57999999999999988889999999999999999999 577664444999999999999998 5665 7899999999
Q ss_pred eeecCcc-ccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 134 LYLSYNR-LSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 134 L~ls~N~-l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++++|+ +++..|..|.++++|+.|++++|.+++..|..+..+++|..+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 203 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHL 203 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEE
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCee
Confidence 9999994 776667889999999999999999999889888887776655
No 330
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.44 E-value=1.4e-13 Score=147.77 Aligned_cols=125 Identities=17% Similarity=0.160 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCC-CCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG-TIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|++++..|..|+.+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++ .+|..++.+++|++|
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP-LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT-CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc-CCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 57999999999999988899999999999999999999666655766 9999999999999986 467889999999999
Q ss_pred eecCccccCCCC-ccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 135 YLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 135 ~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++++|.+.+.+| ..|.++++|+.|++++|.+++.+|..+..+.++..
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 999999666676 58999999999999999999998988776655443
No 331
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.44 E-value=1.1e-13 Score=141.87 Aligned_cols=126 Identities=18% Similarity=0.160 Sum_probs=101.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|++++|.++...+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccC-CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46788999999888655555788999999999999998555556655 89999999999999877777889999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|.++...+..|.++++|++|++++|.+++..|..+..+++|+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 99999984333446889999999999999988777777776666554
No 332
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.44 E-value=1.7e-13 Score=148.80 Aligned_cols=122 Identities=23% Similarity=0.196 Sum_probs=67.2
Q ss_pred CEEEEEcCCCCccccCccc-ccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC---CCccCcCCCCCc
Q 040267 57 RILSLELEEMNLSGQVPES-LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT---IPHELGNCVYLN 132 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~---~p~~~~~l~~L~ 132 (538)
+++.|+|++|.+++..|+. +..+++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++. .+..+..+++|+
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG-LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT-CTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC-CCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 4566666666665554433 555666666666666665555544444 55555666655555541 223455555555
Q ss_pred EeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 133 ~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
+|+|++|++++..|..|.++++|+.|++++|++++..|..+.+++.+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 55555555555555555555555555555555555555555544443
No 333
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.43 E-value=2.2e-13 Score=125.86 Aligned_cols=120 Identities=17% Similarity=0.249 Sum_probs=100.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.++ .++.+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSG-LTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTT-CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcC-CCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 46899999999765 3457899999999999999999878888776 99999999999999988888999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.+.+.+| .+..+++|+.|++++|.+++. + .+..+++|..
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~ 185 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQ 185 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCE
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCE
Confidence 99998444677 689999999999999999874 3 4555555443
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.43 E-value=1.8e-13 Score=135.96 Aligned_cols=115 Identities=22% Similarity=0.282 Sum_probs=76.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCc--CChhH-hhcCCCCcEEEcccCCCCCCCCc----cCcCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK--IPTQL-CKWFPYLVSLDLSNNDLSGTIPH----ELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--ip~~~-~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l 128 (538)
.+++.|+|++|++++..|..++.+++|++|+|++|++.+. ++... ...+++|++|+|++|+++ .+|. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 4688888888888877777888888888888888887652 22111 122666777777777775 3333 24566
Q ss_pred CCCcEeeecCccccCCCCccccCC---ccccEEecccccCCCCCCcc
Q 040267 129 VYLNTLYLSYNRLSGPLPPQLSSL---VRLKQFSVAYNCLSGRIPSF 172 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~~p~~l~~l---~~L~~l~l~~N~l~g~~p~~ 172 (538)
++|++|+|++|++++..|..+..+ ++|+.|++++|+|+ .+|..
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~ 269 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKG 269 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhh
Confidence 777777777777776666666655 46777777777777 44543
No 335
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.43 E-value=2.8e-13 Score=134.69 Aligned_cols=117 Identities=23% Similarity=0.284 Sum_probs=80.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCc--CChhH--hhcCCCCcEEEcccCCCCC--CCC-ccCcCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK--IPTQL--CKWFPYLVSLDLSNNDLSG--TIP-HELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--ip~~~--~~~l~~L~~L~Ls~N~l~g--~~p-~~~~~l 128 (538)
.+++.|+|++|++++..|..|+.+++|++|+|++|++.|. +|..+ .. +++|++|+|++|++++ .++ ..+..+
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~l 227 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK-FPTLQVLALRNAGMETPSGVCSALAAAR 227 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS-CTTCCEEECTTSCCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc-CCCCCEEECCCCcCcchHHHHHHHHhcC
Confidence 4678888888888877777788888888888888887765 23333 33 7777777777777762 222 233566
Q ss_pred CCCcEeeecCccccCCCC-ccccCCccccEEecccccCCCCCCcccc
Q 040267 129 VYLNTLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
++|++|+|++|++++..| ..+..+++|+.|++++|.|+ .+|..+.
T Consensus 228 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 228 VQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp CCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred CCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 777777777777777664 44556677777777777777 5565443
No 336
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.43 E-value=1.8e-13 Score=147.40 Aligned_cols=124 Identities=17% Similarity=0.173 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++..+. +..+++|+.|++++|.+++..|...+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 373 ~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp SCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 3567777777777654333 666666666666666666554432222366666666666666666666666666666666
Q ss_pred ecCcccc-CCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLS-GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~-g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.++ +.+|..+..+++|+.|++++|.+++..|..+..+++|.
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 6666665 45666666666666666666666665565555544443
No 337
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.1e-13 Score=121.01 Aligned_cols=104 Identities=20% Similarity=0.265 Sum_probs=89.5
Q ss_pred CCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEc
Q 040267 41 FICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112 (538)
Q Consensus 41 ~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 112 (538)
+.|.|+.+.|.+. ....++.|+|++|+|++..|..|..+++|++|+|++|+|+ .+|...+..+++|++|+|
T Consensus 7 C~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 7 CSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEEC
Confidence 4578999999752 1357899999999999998999999999999999999999 566555444999999999
Q ss_pred ccCCCCCCCCccCcCCCCCcEeeecCccccCCC
Q 040267 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPL 145 (538)
Q Consensus 113 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 145 (538)
++|+|++..|..|..+++|++|+|++|.++..-
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999999766667999999999999999998643
No 338
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.42 E-value=3.6e-13 Score=140.51 Aligned_cols=120 Identities=20% Similarity=0.196 Sum_probs=63.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhc----------------------CCCCcEEEcc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW----------------------FPYLVSLDLS 113 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~----------------------l~~L~~L~Ls 113 (538)
.+++.|+|++|.+++..+..|..+++|+.|+|++|+..+.+|...+.. +++|+.|+|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls 215 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLS 215 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECT
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECC
Confidence 356677777777665554455555555555555533333444332222 4455555555
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccc
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~ 175 (538)
+|.+++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..
T Consensus 216 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 216 GNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred CCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 55555444555555555555555555555555555555555555555555555544444433
No 339
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.42 E-value=5.7e-13 Score=136.63 Aligned_cols=125 Identities=21% Similarity=0.252 Sum_probs=107.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L 134 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|.++ .+|.. ++.+++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcC-CCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 46899999999999888889999999999999999999766666666 999999999999999 55554 6999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++|.+++..|..+..+++|+.|++++|.+++.....+.++..+...
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~ 194 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVS 194 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecc
Confidence 999999998888889999999999999999997644445555444443
No 340
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.42 E-value=1.7e-13 Score=120.56 Aligned_cols=104 Identities=21% Similarity=0.188 Sum_probs=92.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC-CCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT-IPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|++++. ..++.+++|++|+|++|.+++.+|..+.. +++|++|++++|.+++. .|..++.+++|++|
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK-CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH-CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh-CCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 5799999999999976 78999999999999999999878887766 99999999999999863 45889999999999
Q ss_pred eecCccccCCCC---ccccCCccccEEeccc
Q 040267 135 YLSYNRLSGPLP---PQLSSLVRLKQFSVAY 162 (538)
Q Consensus 135 ~ls~N~l~g~~p---~~l~~l~~L~~l~l~~ 162 (538)
++++|.+++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999997655 5789999999999874
No 341
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.41 E-value=5e-13 Score=143.92 Aligned_cols=110 Identities=23% Similarity=0.202 Sum_probs=98.6
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|+++ .+|.. .+++|++|
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L 126 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF-NQDLEYLDVSHNRLQ-NISCC--PMASLRHL 126 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT-CTTCCEEECTTSCCC-EECSC--CCTTCSEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC-CCCCCEEECCCCcCC-ccCcc--ccccCCEE
Confidence 357999999999999888889999999999999999999777777766 999999999999998 78876 89999999
Q ss_pred eecCccccC-CCCccccCCccccEEecccccCCCC
Q 040267 135 YLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 135 ~ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
+|++|++++ .+|..|.++++|++|++++|.+++.
T Consensus 127 ~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 127 DLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL 161 (562)
T ss_dssp ECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT
T ss_pred ECCCCCccccCchHhhcccCcccEEecCCCccccC
Confidence 999999997 5678999999999999999999864
No 342
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.40 E-value=2.3e-13 Score=145.06 Aligned_cols=108 Identities=23% Similarity=0.252 Sum_probs=88.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|++++..|..+.. +++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKF-NQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTT-CTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhc-ccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 46888888888888777778888888888888888888666777766 888888888888887 67766 788888888
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCC
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
|++|.+++ .+|..|+++++|++|++++|.+++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch
Confidence 88888887 577888888888888888888876
No 343
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=1.8e-13 Score=124.05 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=94.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCC-CCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCK-SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..++.|+|++|+++. +|. +..+. +|+.|+|++|.+++ + ..+.. +++|++|+|++|++++..|..+..+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRK-L-DGFPL-LRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCE-E-CCCCC-CSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCc-c-ccccc-CCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 358999999999984 454 55554 99999999999985 4 45555 8999999999999985444445899999999
Q ss_pred eecCccccCCCCc--cccCCccccEEecccccCCCCCCcc----cccccccccc
Q 040267 135 YLSYNRLSGPLPP--QLSSLVRLKQFSVAYNCLSGRIPSF----FNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~--~l~~l~~L~~l~l~~N~l~g~~p~~----~~~~~~l~~~ 182 (538)
+|++|+++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|..+
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEE
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCcccee
Confidence 99999996 6776 78899999999999999984 4553 6666666555
No 344
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.40 E-value=5.3e-13 Score=142.22 Aligned_cols=123 Identities=24% Similarity=0.202 Sum_probs=98.9
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC--cCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCC
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYL 131 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L 131 (538)
..+++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+.. +++|++|+|++|.+++.+|.. +..+++|
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~-l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ-MKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT-CTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh-CCCCCEEECCCCcCCcccccchhccCccC
Confidence 3568999999999998889999999999999999999986 56666666 899999999999998767764 7788888
Q ss_pred cEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 132 ~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|+|++|.+++.+|..+. ++|+.|++++|+++ .+|..+..+++|..
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQE 448 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCE
Confidence 8888888888877776664 67888888888888 66765555555543
No 345
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.40 E-value=6e-13 Score=139.31 Aligned_cols=119 Identities=18% Similarity=0.155 Sum_probs=63.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccC--------------------
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN-------------------- 115 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N-------------------- 115 (538)
.+++.|+|++|++++..+..|..+++|+.|+|++|+..+.+|...+..+++|++|+|++|
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls 226 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMS 226 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECT
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECc
Confidence 467788888888776555555555555555555543333444433333445555555544
Q ss_pred --CCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 116 --DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 116 --~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
.+++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+.
T Consensus 227 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp TSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred CCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 44444444455555555555555555544444555555555555555555544444333
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.39 E-value=4.2e-13 Score=143.57 Aligned_cols=132 Identities=25% Similarity=0.387 Sum_probs=98.4
Q ss_pred CCCCCCCCCCCCCCC-----ccccc-ccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhh
Q 040267 29 LSSWSLTNSSVGFIC-----RFNGV-SCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102 (538)
Q Consensus 29 l~~W~~~~~~~~~~c-----~w~gv-~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~ 102 (538)
+.+|..+ ..+| .|.|+ .|.. ++++.|+|++|+|++ +|..+ +++|+.|+|++|+|+ .+| .
T Consensus 33 l~~W~~~----~~~~~~~~~~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip-~--- 97 (571)
T 3cvr_A 33 WDKWEKQ----ALPGENRNEAVSLLKECLI---NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP-E--- 97 (571)
T ss_dssp HHHHHTT----CCTTCCHHHHHHHHHHHHH---TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC-C---
T ss_pred HHHHhcc----CCccccccchhhhcccccc---CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc-c---
Confidence 4457532 3467 79999 7853 479999999999987 77766 378999999999998 788 2
Q ss_pred cCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 103 WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 103 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
.+++|++|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|++++|.|++ +|..+.++..|.+.
T Consensus 98 ~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls 168 (571)
T 3cvr_A 98 LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVR 168 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECC
T ss_pred ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECC
Confidence 27889999999999986 777 655 88888888888886 776 56788888888888886 55544444444444
Q ss_pred cc
Q 040267 183 AD 184 (538)
Q Consensus 183 ~~ 184 (538)
+|
T Consensus 169 ~N 170 (571)
T 3cvr_A 169 NN 170 (571)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 347
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.39 E-value=5.8e-13 Score=150.37 Aligned_cols=120 Identities=20% Similarity=0.214 Sum_probs=97.1
Q ss_pred CCEEEEEcCCCCccccC-cccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCcc--CcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQV-PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE--LGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~ 132 (538)
.+++.|+|++|++.+.+ |..|+++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++.+|.. ++++++|+
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQG-LFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCS-CSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccC-CcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 46888888888777676 667888888888888888888777777766 888888888888888777765 88888888
Q ss_pred EeeecCccccCCCC-ccccCCccccEEecccccCCCCCCcccccc
Q 040267 133 TLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 133 ~L~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
+|+|++|.+++..| ..|.++++|+.|++++|.+++..|..+..+
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 88888888887654 568888888888888888888877776554
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.38 E-value=4.6e-13 Score=133.38 Aligned_cols=122 Identities=19% Similarity=0.082 Sum_probs=89.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..++.+++|++|+|++|.+++..|..+...+++|++|+|++|.+++. | ....+++|++|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEE
Confidence 35777888888887777777778888888888888888666666654478888888888888744 3 334578888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|++++ +|+.+..+++|+.|++++|.+++ +|..+..+++|..
T Consensus 198 Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~ 241 (317)
T 3o53_A 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEH 241 (317)
T ss_dssp CCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCE
T ss_pred CCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCE
Confidence 88888884 55568888888888888888884 5665555544443
No 349
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.38 E-value=6.9e-13 Score=142.83 Aligned_cols=120 Identities=23% Similarity=0.210 Sum_probs=78.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC--cCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 132 (538)
.+++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+.. +++|++|+|++|++++.+|.. +..+++|+
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKN-MSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTT-CTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcC-CCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 467888888888887778778888888888888888874 23344444 777888888888887656653 56666666
Q ss_pred EeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 133 ~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
+|+|++|++++.+|..+. ++|+.|++++|+++ .+|..+..+++|
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 666666666655554443 45666666666665 344433344333
No 350
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.36 E-value=1.5e-12 Score=143.46 Aligned_cols=134 Identities=22% Similarity=0.270 Sum_probs=87.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcC----C----hhHhhcCCCCcEEEcccCCCCCCCCc-cCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKI----P----TQLCKWFPYLVSLDLSNNDLSGTIPH-ELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i----p----~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~ 126 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|.+++.. | ..+.. +++|++|+|++|+++ .+|. .|.
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~-l~~L~~L~L~~N~l~-~i~~~~~~ 557 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG-LSHLHILNLESNGFD-EIPVEVFK 557 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT-CTTCCEEECCSSCCC-CCCTTTTT
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC-CCCCCEEECCCCCCC-CCCHHHcc
Confidence 35677777777777666666777777777777777776421 1 11333 677777777777777 4444 477
Q ss_pred CCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccc----ccccccccccccCCCCC
Q 040267 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN----GAMKMDMLADSRLGGAN 191 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~----~~~~l~~~~~~~l~~~~ 191 (538)
.+++|+.|+|++|++++..|..|.++++|+.|++++|+|++..|..+. ++..+.+.+|+..|.+.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 777777888877777755555567777788888888877776665443 34445555666666543
No 351
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.36 E-value=2.9e-13 Score=134.43 Aligned_cols=115 Identities=19% Similarity=0.145 Sum_probs=60.5
Q ss_pred CEEEEEcCCCCccccCc----ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC--C--CccCcCC
Q 040267 57 RILSLELEEMNLSGQVP----ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT--I--PHELGNC 128 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~--~--p~~~~~l 128 (538)
+++.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|++.+. + +..++.+
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRA-FPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCC-CTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhcc-CCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 45556666666655433 23345556666666666665444444433 56666666666665432 1 1223455
Q ss_pred CCCcEeeecCccccCCCCc----cccCCccccEEecccccCCCCCCccc
Q 040267 129 VYLNTLYLSYNRLSGPLPP----QLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~~p~----~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
++|++|+|++|+++ .+|. .+..+++|++|+|++|.+++..|..+
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 56666666666665 2222 13455566666666666665555443
No 352
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.35 E-value=2.9e-13 Score=143.06 Aligned_cols=112 Identities=22% Similarity=0.232 Sum_probs=61.9
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCC-------------------
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL------------------- 117 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l------------------- 117 (538)
+|+.|+|++|++++..|..|+.+++|++|+|++|.+++.+| +.. +++|++|+|++|.+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~-l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LES-LSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTT-CTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--ccc-CCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 35555555555555444455555555555555555554333 222 44444444444433
Q ss_pred CCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
++..+ ..+++|+.|+|++|.+++..|..+..+++|+.|+|++|.|++.+|..+.
T Consensus 112 ~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 112 SRVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp CCEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CCCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 32222 2345667777777777766666677777777777777777776665543
No 353
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.34 E-value=7.5e-13 Score=119.94 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=93.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc--cCcCCCCCcE
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH--ELGNCVYLNT 133 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 133 (538)
.+++.|+|++|++++. +.+..+++|+.|+|++|.++ .+|+.++..+++|++|+|++|+++ .+|. .+..+++|+.
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 3699999999999975 67999999999999999999 566555334999999999999996 6776 8999999999
Q ss_pred eeecCccccCCCCcc----ccCCccccEEecccccCC
Q 040267 134 LYLSYNRLSGPLPPQ----LSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 134 L~ls~N~l~g~~p~~----l~~l~~L~~l~l~~N~l~ 166 (538)
|+|++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 118 L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 118 LCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999 57775 899999999999999775
No 354
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.34 E-value=1.7e-12 Score=130.02 Aligned_cols=113 Identities=25% Similarity=0.308 Sum_probs=87.6
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|++++|++++ +|..+. ++|+.|+|++|.+++..|..+.. +++|+.|+|++|++++..|..+..+++|+.|+|
T Consensus 173 ~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 173 KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTT-CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 57788888888875 555443 67888888888888666566665 788888888888888776767888888888888
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
++|+++ .+|..+..+++|+.|++++|.+++..+..|.
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 888888 6788888888888888888888866555554
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.33 E-value=3.4e-12 Score=125.51 Aligned_cols=116 Identities=30% Similarity=0.400 Sum_probs=89.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ +..+++|+.|+|++|.+++ +|. +.. +++|++|+|++|++++ + ..+..+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hcc-CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 468888999988886544 8888888888888888884 443 555 8888888888888875 3 4678888888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++. ..+..+++|+.|++++|.+++..| +..+++|..+
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 888888864 568888888888888888887554 5555555443
No 356
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.32 E-value=1.2e-12 Score=124.77 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=93.1
Q ss_pred CCEEEEEcCCCC-ccccCcccccCCCCCCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCc-
Q 040267 56 NRILSLELEEMN-LSGQVPESLQSCKSLQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN- 132 (538)
Q Consensus 56 ~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 132 (538)
.+++.|+|++|+ +++..+..|..+++|++|+|++ |.++ .+|...+..+++|++|+|++|.+++ +|. ++.+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 568999999997 8876667899999999999998 9998 5554433348999999999999985 776 88888888
Q ss_pred --EeeecCc-cccCCCCccccCCcccc-EEecccccCCCCCCc
Q 040267 133 --TLYLSYN-RLSGPLPPQLSSLVRLK-QFSVAYNCLSGRIPS 171 (538)
Q Consensus 133 --~L~ls~N-~l~g~~p~~l~~l~~L~-~l~l~~N~l~g~~p~ 171 (538)
+|++++| .+++..+..|.++++|+ .|++++|.++ .+|.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~ 173 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQG 173 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCH
Confidence 9999999 89876666788999999 9999999998 4554
No 357
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.32 E-value=6.3e-12 Score=125.75 Aligned_cols=114 Identities=24% Similarity=0.275 Sum_probs=100.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|++++|+++. +|..+. ++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++..|..+..+++|++|+
T Consensus 171 ~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 171 KKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKG-LNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp TTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTT-CTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred CCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 468999999999984 665554 89999999999999777777776 99999999999999988788899999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
|++|.++ .+|..+..+++|+.|++++|++++..+..|.
T Consensus 247 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 9999999 7999999999999999999999987666664
No 358
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.32 E-value=5.3e-12 Score=114.13 Aligned_cols=104 Identities=25% Similarity=0.280 Sum_probs=86.3
Q ss_pred CCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcc
Q 040267 42 ICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS 113 (538)
Q Consensus 42 ~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls 113 (538)
.|...-+.|.+. ....++.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|...+..+++|++|+|+
T Consensus 11 ~C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 11 SCDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp EECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred EECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECC
Confidence 355566777642 2357899999999999998999999999999999999999 4666654449999999999
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCc
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPP 147 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 147 (538)
+|+|++..+..|..+++|++|+|++|.+.. .|.
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~ 122 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECR 122 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCT-TBG
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCccc-ccc
Confidence 999996555569999999999999999994 443
No 359
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.30 E-value=6.7e-13 Score=132.23 Aligned_cols=121 Identities=25% Similarity=0.348 Sum_probs=104.6
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|.+++..+..+. .+++|++|+|++|.+++ +|... . +++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~-~-l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQV-V-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECCC-C-CTTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccccc-c-cccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 5799999999999988887774 79999999999999994 45433 3 899999999999999 466679999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCC-CCCCccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS-GRIPSFFNGAMKMDM 181 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~-g~~p~~~~~~~~l~~ 181 (538)
+|++|+++ .+|..+..+++|+.|++++|.++ +.+|.++..++.+..
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~ 266 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQT 266 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHH
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceE
Confidence 99999999 58989999999999999999999 777777776665543
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.30 E-value=5.6e-12 Score=122.02 Aligned_cols=103 Identities=23% Similarity=0.275 Sum_probs=65.8
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ +..+++|+.|+|++|++++ +|... .++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~---~~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP---SACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC---CSSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc---cCcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 356677777777765433 6667777777777777763 44321 1667777777777764 33 466677777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|++++ +| .+..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch
Confidence 77777764 33 466677777777777777654
No 361
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.29 E-value=2.1e-14 Score=132.87 Aligned_cols=121 Identities=23% Similarity=0.277 Sum_probs=100.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+.. +++|++|+|++|++++ +| .+..+++|++|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~-~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV-ADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH-HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc-CCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 468999999999987 66 8889999999999999998 78887665 7899999999999985 55 688899999999
Q ss_pred ecCccccCCCC--ccccCCccccEEecccccCCCCCCcc----------ccccccccccc
Q 040267 136 LSYNRLSGPLP--PQLSSLVRLKQFSVAYNCLSGRIPSF----------FNGAMKMDMLA 183 (538)
Q Consensus 136 ls~N~l~g~~p--~~l~~l~~L~~l~l~~N~l~g~~p~~----------~~~~~~l~~~~ 183 (538)
|++|++++ +| ..+..+++|++|++++|.+++.+|.. +..+++|..++
T Consensus 122 l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred CCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 99999985 43 47889999999999999998876652 55666676664
No 362
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.29 E-value=2.5e-14 Score=132.39 Aligned_cols=121 Identities=26% Similarity=0.365 Sum_probs=101.7
Q ss_pred CCEEEEEcCCCCccccCcc------cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCC
Q 040267 56 NRILSLELEEMNLSGQVPE------SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCV 129 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 129 (538)
.+++.++|+.+.++|.+|. .+..+++|++|+|++|.+++ +| .+.. +++|++|+|++|.++ .+|..+..++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~-l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSG-MENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHH-HTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-cccc-CCCCCEEECCCCCcc-cccchhhcCC
Confidence 3567778888888888776 89999999999999999995 88 7776 999999999999998 7898888889
Q ss_pred CCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 130 YLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 130 ~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+|++|+|++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|..+
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 99999999999996 66 68899999999999999986432 345555555443
No 363
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.28 E-value=8.1e-12 Score=123.83 Aligned_cols=114 Identities=25% Similarity=0.469 Sum_probs=77.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+.. +++|++|+|++|++++ +|. +..+++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~-l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAG-LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTT-CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcC-CCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 457778888887775433 7777888888888888773 44 4444 7778888888887774 443 77777777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.+++ +|. +..+++|+.|++++|.+++..+ +..+++|.
T Consensus 136 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~ 176 (308)
T 1h6u_A 136 LDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLT 176 (308)
T ss_dssp CCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCC
T ss_pred CCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh--hcCCCCCC
Confidence 77777775 333 6777777777777777775433 44444443
No 364
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.27 E-value=9.9e-12 Score=123.18 Aligned_cols=115 Identities=22% Similarity=0.319 Sum_probs=91.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++. + .+..+++|+.|+|++|.+++ +|. +.. +++|++|+|++|.+++. |. ++.+++|+.|+
T Consensus 85 ~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 85 TKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAG-LSNLQVLYLDLNQITNI-SP-LAGLTNLQYLS 157 (308)
T ss_dssp CSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTT-CTTCCEEECCSSCCCCC-GG-GGGCTTCCEEE
T ss_pred CCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcC-CCCCCEEECCCCccCcC-cc-ccCCCCccEEE
Confidence 5789999999999863 3 68899999999999999984 554 555 89999999999999854 43 88899999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.+++ +|. +..+++|+.|++++|.+++..+ +..+++|..
T Consensus 158 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 199 (308)
T 1h6u_A 158 IGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIE 199 (308)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred ccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCE
Confidence 99999985 544 8888999999999999986544 455544443
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.27 E-value=1.3e-11 Score=121.33 Aligned_cols=116 Identities=30% Similarity=0.435 Sum_probs=97.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++ +| .+..+++|++|+|++|.+++ ++ .+.. +++|++|+|++|++++. ..++.+++|+.|+
T Consensus 90 ~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~-~l~~-l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp TTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-Ch-hhcC-CCCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 579999999999986 33 49999999999999999995 44 5665 99999999999999864 6799999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..| +..+++|+.|++++|.+++ +|. +..+++|..+
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L 205 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVL 205 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEE
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEE
Confidence 99999997544 9999999999999999986 443 5555555443
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.26 E-value=1.5e-11 Score=118.88 Aligned_cols=115 Identities=22% Similarity=0.295 Sum_probs=95.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+++ .+| .+..+++|+.|+|++|.+++ +|. +.. +++|++|+|++|++++ +|.... ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~-l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKD-LTKLEELSVNRNRLKN-LNGIPS--ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTT-CSSCCEEECCSSCCSC-CTTCCC--SSCCEEE
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hcc-CCCCCEEECCCCccCC-cCcccc--CcccEEE
Confidence 46899999999998 455 68999999999999999995 555 665 9999999999999985 565333 9999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++ +| .+..+++|+.|++++|++++. | .+..+++|..+
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L 155 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVL 155 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEE
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEE
Confidence 99999996 44 599999999999999999975 4 46656555543
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.26 E-value=9e-12 Score=134.62 Aligned_cols=114 Identities=30% Similarity=0.401 Sum_probs=74.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+|+.|+|++|+|++..| +..+++|+.|+|++|.|++ +| .+.. +++|+.|+|++|.+++ + +.+..|++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhcc-CCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 457777777777776444 6777777777777777763 44 4444 6777777777777764 3 3466677777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.+++. ..+..+++|+.|+|++|.|++..| +..+++|.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 178 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 178 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCC
Confidence 777777753 456667777777777777776555 44444443
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.24 E-value=1.9e-11 Score=132.14 Aligned_cols=115 Identities=30% Similarity=0.406 Sum_probs=96.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+|+.|+|++|.|++ +| .+..+++|+.|+|++|.|++ +| .+.. +++|+.|+|++|.+++. ..++.|++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp TTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccC-CCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 579999999999986 33 78999999999999999995 54 4666 99999999999999864 6789999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.|++..| +..+++|+.|+|++|.|++. | .+..+++|..
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~ 201 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDV 201 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSE
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCE
Confidence 99999997655 89999999999999999874 4 3555555543
No 369
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.24 E-value=8e-12 Score=126.19 Aligned_cols=135 Identities=15% Similarity=0.121 Sum_probs=99.8
Q ss_pred CCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcE-EEc
Q 040267 42 ICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS-LDL 112 (538)
Q Consensus 42 ~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~-L~L 112 (538)
-|.|..|.|.+. .+..++.|+|++|+|+...+..|.++++|++|+|++|.+.+.+|...+..+++|.. +.+
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 478888999642 23468889999999986555678889999999999999887888766555777664 667
Q ss_pred ccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEeccc-ccCCCCCCcccccc
Q 040267 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAY-NCLSGRIPSFFNGA 176 (538)
Q Consensus 113 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~-N~l~g~~p~~~~~~ 176 (538)
++|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |.+....+..|..+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 77888877777888899999999999999876666666666777777765 44554333444433
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.24 E-value=1.4e-11 Score=124.09 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=57.7
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|++++|.+++..+ +..+++|+.|+|++|.+++ +|. +.. +++|++|++++|.+++ + ..+..+++|++|++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~-l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LAN-LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTT-CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhc-CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 45555555555554333 4555555555555555552 332 333 5555555555555543 2 23555555555555
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
++|.+++ + +.+..+++|+.|++++|.+++..|..+..+++|
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 5555553 2 234555555555555555555544444444333
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.23 E-value=1.1e-11 Score=133.09 Aligned_cols=101 Identities=27% Similarity=0.292 Sum_probs=89.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCC-CccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTI-PHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L 134 (538)
.+++.|+|++|+|+ .+|..|+.+++|+.|+|++|.|++ +| .+.. +++|++|+|++|+|++.. |..++.+++|+.|
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~-l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN-LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT-CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC-CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 46999999999999 889999999999999999999995 88 7776 999999999999999877 9999999999999
Q ss_pred eecCccccCCCCcc---ccCCccccEEec
Q 040267 135 YLSYNRLSGPLPPQ---LSSLVRLKQFSV 160 (538)
Q Consensus 135 ~ls~N~l~g~~p~~---l~~l~~L~~l~l 160 (538)
+|++|.|++..|.. +..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999765532 234788888864
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.22 E-value=7.1e-12 Score=134.09 Aligned_cols=107 Identities=26% Similarity=0.291 Sum_probs=73.0
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. . +++|++|+|++|+|++ +|. +. ++|+.|+|
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~-l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~L 187 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---L-PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDV 187 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---C-CTTCCEEECCSSCCSC-CCC-CC--TTCCEEEC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---c-CCCcCEEECCCCCCCC-cch-hh--CCCCEEEC
Confidence 56667777777765 554 56778888888888874 665 2 6778888888888875 776 55 77888888
Q ss_pred cCccccCCCCccccCCccc-------cEEecccccCCCCCCccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRL-------KQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L-------~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|+|+ .+|. +.. +| +.|+|++|.|+ .+|..+..+++|..
T Consensus 188 s~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp CSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred cCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 888887 5666 544 66 77777777777 46665554554443
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.21 E-value=2.8e-11 Score=127.09 Aligned_cols=114 Identities=26% Similarity=0.376 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++..| +..+++|+.|+|++|.+++. |. +.. +++|+.|+|++|++++..| ++.+++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~-l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAG-LTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTT-CTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccC-CCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 357777777777776544 67777777777777777743 33 444 6777777777777765333 66677777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..| +..+++|+.|++++|.+++. ..+..+++|.
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 356 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNIN 356 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCC
Confidence 77777775444 56666777777777776654 2344444433
No 374
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.19 E-value=6.1e-11 Score=124.10 Aligned_cols=99 Identities=21% Similarity=0.251 Sum_probs=58.8
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|+|++|++++. | .++.+++|++|+|++|++++ +| +.. +++|++|+|++|.+++ +| ++.+++|++|+|
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~-l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQ-NTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTT-CTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--ccc-CCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 456666666666643 3 45666666666666666664 33 333 6666666666666664 23 556666666666
Q ss_pred cCccccCCCCccccCCccccEEecccccCCC
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
++|++++ +| +..+++|+.|++++|.+++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 6666664 33 5566666666666666665
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.18 E-value=7.6e-11 Score=123.28 Aligned_cols=111 Identities=25% Similarity=0.403 Sum_probs=77.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++ +| +++++++|++|++++|++++ +|.. .++|++|++++|++++ +| .++.+++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 467788888888875 66 58888888888888888874 6643 4568888888888875 66 577888888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
+++|++++ +|... ++|+.|++++|.++ .+|. +..+++|..
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~ 241 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTT 241 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCE
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCE
Confidence 88888775 55432 36677777777776 5553 445444443
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=2.9e-11 Score=121.76 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=86.1
Q ss_pred CeEEccCC-cCCCcCChhHhhcCCCCcEEEccc-CCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEec
Q 040267 83 QVLNLSTN-NLFGKIPTQLCKWFPYLVSLDLSN-NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160 (538)
Q Consensus 83 ~~L~Ls~N-~l~g~ip~~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 160 (538)
..+++++| +|+ .||. +.. +++|+.|+|++ |+|++..|..|+.|++|+.|+|++|+|++..|..|.+|++|+.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~-~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPG-AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCS-CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCC-CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45799998 898 6998 776 89999999996 9999877789999999999999999999988999999999999999
Q ss_pred ccccCCCCCCcccccc--ccccccccccCC
Q 040267 161 AYNCLSGRIPSFFNGA--MKMDMLADSRLG 188 (538)
Q Consensus 161 ~~N~l~g~~p~~~~~~--~~l~~~~~~~l~ 188 (538)
++|+|++..+..|..+ ..|.+.+|..-|
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccC
Confidence 9999998777666553 333333444333
No 377
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.17 E-value=2.7e-12 Score=128.64 Aligned_cols=107 Identities=23% Similarity=0.327 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCCcccc-CcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccC-CCCC-CCCccCcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQ-VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN-DLSG-TIPHELGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N-~l~g-~~p~~~~~l~~L~ 132 (538)
.+++.|+|++|++++. +|..+..+++|++|+|++|.+++..|..+.. +++|++|+|++| .+++ .+|..+..+++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 3466666666666654 5556666666666666666666556655555 666666666666 4554 2454555566666
Q ss_pred EeeecCc-cccCC-CCccccCCc-cccEEecccc
Q 040267 133 TLYLSYN-RLSGP-LPPQLSSLV-RLKQFSVAYN 163 (538)
Q Consensus 133 ~L~ls~N-~l~g~-~p~~l~~l~-~L~~l~l~~N 163 (538)
+|+|++| .+++. +|..+..++ +|+.|++++|
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666666 65543 445555555 6666666666
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.16 E-value=1.1e-10 Score=122.11 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=60.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++. + ++.+++|++|++++|...+.++ +.. +++|++|++++|++++ +| ++.+++|+.|+
T Consensus 127 ~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~~-l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~ 197 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VTP-QTQLTTLDCSFNKITE-LD--VSQNKLLNRLN 197 (457)
T ss_dssp TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CTT-CTTCCEEECCSSCCCC-CC--CTTCTTCCEEE
T ss_pred CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--ccc-CCcCCEEECCCCccce-ec--cccCCCCCEEE
Confidence 4677788888887763 2 6666666666666665555553 333 5666666666666664 44 55556666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
+++|++++. .+..+++|+.|++++|++++
T Consensus 198 l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 198 CDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 666666542 25555566666666666655
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.15 E-value=7.6e-11 Score=123.78 Aligned_cols=114 Identities=26% Similarity=0.354 Sum_probs=94.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++. +.+..+++|+.|+|++|.+++..| +.. +++|+.|++++|.+++. |. +..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~-l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG-LTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT-CTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc-CCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 5689999999999864 468889999999999999996554 555 89999999999999864 43 88999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..| +..+++|+.|++++|++++..| +..+++|.
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 99999997444 8889999999999999998766 44444443
No 380
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.14 E-value=1.5e-12 Score=130.58 Aligned_cols=125 Identities=20% Similarity=0.181 Sum_probs=103.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCc-CChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK-IPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+.. +++|++|+|++|.+++..|..++.+++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~-~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQ-CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTT-BCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhh-CCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 5689999999999977665 56799999999999999866 7777666 8999999999999998888889999999999
Q ss_pred eecCc-cccCC-CCccccCCccccEEecccc-cCCCC-CCccccccc-ccccc
Q 040267 135 YLSYN-RLSGP-LPPQLSSLVRLKQFSVAYN-CLSGR-IPSFFNGAM-KMDML 182 (538)
Q Consensus 135 ~ls~N-~l~g~-~p~~l~~l~~L~~l~l~~N-~l~g~-~p~~~~~~~-~l~~~ 182 (538)
+|++| .+++. +|..+.++++|+.|++++| .+++. ++..+..++ +|..+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L 200 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL 200 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEE
Confidence 99999 68763 6777888999999999999 88864 565555555 54443
No 381
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.13 E-value=9e-11 Score=118.03 Aligned_cols=114 Identities=25% Similarity=0.359 Sum_probs=80.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|++++|.+++..+ +..+++|+.|++++|.+++..+ +.. +++|++|++++|.+++ +|. +..+++|++|+
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~-~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VAN-MTRLNSLKIGNNKITD-LSP-LANLSQLTWLE 249 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGG-CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhc-CCcCCEEEccCCccCC-Ccc-hhcCCCCCEEE
Confidence 457788888888775433 7778888888888888874433 444 7888888888888874 343 77788888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+++|.+++ + +.+..+++|+.|++++|.+++. | .+..+++|.
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~ 290 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLN 290 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCS
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCC
Confidence 88888875 3 4577788888888888888764 3 344444443
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.11 E-value=7.8e-11 Score=123.21 Aligned_cols=109 Identities=33% Similarity=0.483 Sum_probs=74.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC--cCChhH-------------hhcCCCCcEEEcccCCCCCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG--KIPTQL-------------CKWFPYLVSLDLSNNDLSGT 120 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~-------------~~~l~~L~~L~Ls~N~l~g~ 120 (538)
.+++.|++++|.+++ +|.. +++|+.|+|++|.+++ .+|..+ ....++|++|++++|++++
T Consensus 257 ~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 257 PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-
T ss_pred cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-
Confidence 356666666666664 4432 2555666666665554 233221 1112578889999998885
Q ss_pred CCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC--CCCcccccc
Q 040267 121 IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG--RIPSFFNGA 176 (538)
Q Consensus 121 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g--~~p~~~~~~ 176 (538)
+|.. +++|++|++++|+++ .+|. .+++|+.|++++|++++ .+|..+..+
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L 382 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL 382 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh
Confidence 6754 578999999999998 5777 46889999999999998 778777655
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.10 E-value=1.1e-10 Score=126.46 Aligned_cols=115 Identities=28% Similarity=0.355 Sum_probs=67.3
Q ss_pred CCCCCCCCCCCCCCCcccccc--------cCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhH
Q 040267 29 LSSWSLTNSSVGFICRFNGVS--------CWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100 (538)
Q Consensus 29 l~~W~~~~~~~~~~c~w~gv~--------C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~ 100 (538)
.++|... ..+|.|.|.. |.. ..++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|.
T Consensus 12 w~~W~~~----~~~~~~~~r~~~~~~~~~c~~---~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-- 78 (622)
T 3g06_A 12 WSAWRRA----APAEESRGRAAVVQKMRACLN---NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-- 78 (622)
T ss_dssp HHHHHHT----CCGGGHHHHHHHHHHHHHHHH---HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC--
T ss_pred HHHHHhc----CCcchhccccccCcccccccC---CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC--
Confidence 3457542 3478887642 321 24677777777776 5665554 56777777777766 5655
Q ss_pred hhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCC
Q 040267 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 101 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
. +++|++|+|++|+++ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+++
T Consensus 79 -~-l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 79 -L-PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp -C-CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS
T ss_pred -c-CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC
Confidence 2 566777777777766 4554 45666666666666663 443 2344444555554444
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.09 E-value=4.1e-12 Score=130.09 Aligned_cols=123 Identities=18% Similarity=0.239 Sum_probs=62.3
Q ss_pred CEEEEEcCCCCccc----cCcccccCCCCCCeEEccCCcCCCcCChhHhhc---C---------CCCcEEEcccCCCC-C
Q 040267 57 RILSLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW---F---------PYLVSLDLSNNDLS-G 119 (538)
Q Consensus 57 ~l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~---l---------~~L~~L~Ls~N~l~-g 119 (538)
+++.|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+... + ++|++|+|++|+++ +
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 45556666665555 345555555556666666555543322222221 2 55556666666554 3
Q ss_pred CCC---ccCcCCCCCcEeeecCcccc--C---CCCccccCCccccEEecccccCC----CCCCccccccccc
Q 040267 120 TIP---HELGNCVYLNTLYLSYNRLS--G---PLPPQLSSLVRLKQFSVAYNCLS----GRIPSFFNGAMKM 179 (538)
Q Consensus 120 ~~p---~~~~~l~~L~~L~ls~N~l~--g---~~p~~l~~l~~L~~l~l~~N~l~----g~~p~~~~~~~~l 179 (538)
.+| ..+..+++|++|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCc
Confidence 333 23445555666666666555 2 22334555556666666666554 3444444444333
No 385
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.09 E-value=8.2e-11 Score=127.35 Aligned_cols=88 Identities=27% Similarity=0.249 Sum_probs=49.6
Q ss_pred CCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEe
Q 040267 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159 (538)
Q Consensus 80 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ 159 (538)
++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp~----~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LPV----LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCEEEccCCccCc-CCC----CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 445555555555552 441 2455566666666555 4444 4455666666666666 5566666666666666
Q ss_pred cccccCCCCCCccccccc
Q 040267 160 VAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 160 l~~N~l~g~~p~~~~~~~ 177 (538)
|++|.+++.+|..+..+.
T Consensus 291 L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 291 LEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSCCCCHHHHHHHHHHH
T ss_pred ecCCCCCCcCHHHHHhcc
Confidence 666666665555544443
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.08 E-value=1.4e-11 Score=126.14 Aligned_cols=126 Identities=20% Similarity=0.246 Sum_probs=103.8
Q ss_pred CCEEEEEcCCCCcc-ccCc---ccccCCCCCCeEEccCCcCC--C---cCChhHhhcCCCCcEEEcccCCCC----CCCC
Q 040267 56 NRILSLELEEMNLS-GQVP---ESLQSCKSLQVLNLSTNNLF--G---KIPTQLCKWFPYLVSLDLSNNDLS----GTIP 122 (538)
Q Consensus 56 ~~l~~L~L~~n~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~--g---~ip~~~~~~l~~L~~L~Ls~N~l~----g~~p 122 (538)
.+++.|+|++|+++ +.+| ..+..+++|+.|+|++|.++ | .+|..+.. +++|++|+|++|.++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~-~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY-CQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGG-CTTCCEEECCSSCCHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhc-CCCccEEECcCCCCCcHHHHHHH
Confidence 67999999999998 4555 57788999999999999998 3 23435555 899999999999996 6788
Q ss_pred ccCcCCCCCcEeeecCccccCC----CCcccc--CCccccEEecccccCCC----CCCccc-ccccccccc
Q 040267 123 HELGNCVYLNTLYLSYNRLSGP----LPPQLS--SLVRLKQFSVAYNCLSG----RIPSFF-NGAMKMDML 182 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~----~p~~l~--~l~~L~~l~l~~N~l~g----~~p~~~-~~~~~l~~~ 182 (538)
..+..+++|+.|+|++|.+++. +|..+. .+++|+.|+|++|.+++ .+|..+ .++++|..+
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L 308 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFL 308 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEE
Confidence 8999999999999999999976 577774 48999999999999998 477665 445555544
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.06 E-value=3.3e-11 Score=122.20 Aligned_cols=111 Identities=26% Similarity=0.258 Sum_probs=68.9
Q ss_pred CEEEEEcCCCCccccCc----ccccCCC-CCCeEEccCCcCCCcCChhHhhcC-----CCCcEEEcccCCCCCCCCccCc
Q 040267 57 RILSLELEEMNLSGQVP----ESLQSCK-SLQVLNLSTNNLFGKIPTQLCKWF-----PYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.++.|+|++|++++..+ ..+..++ +|++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~-~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ-ILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH-HHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH-HHhccCCCccEEECcCCcCChHHHHHHH
Confidence 46777777777766555 5566666 6777777777776555555544 3 6677777777777655554333
Q ss_pred ----CC-CCCcEeeecCccccCCCCcccc----C-CccccEEecccccCCCC
Q 040267 127 ----NC-VYLNTLYLSYNRLSGPLPPQLS----S-LVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 127 ----~l-~~L~~L~ls~N~l~g~~p~~l~----~-l~~L~~l~l~~N~l~g~ 168 (538)
.+ ++|++|+|++|.+++..+..+. . .++|+.|++++|.+++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 33 6677777777777655444332 2 24677777777776643
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.05 E-value=1.7e-10 Score=116.37 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=95.3
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc-cCcCCCCCcE-eeec
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH-ELGNCVYLNT-LYLS 137 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L~ls 137 (538)
.++-++++|+ .+|..+ .++|+.|+|++|+|+ .||...+..+++|++|+|++|++.+.+|. .|.++++|.. +.++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 5778899998 778766 468999999999999 78876555599999999999999877775 5788988765 6778
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 178 (538)
+|+++...|..|..+++|++|++++|.+++..+..+....+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 129 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 129 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSS
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccch
Confidence 89999877889999999999999999999776655544433
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.02 E-value=6e-11 Score=120.33 Aligned_cols=113 Identities=27% Similarity=0.263 Sum_probs=95.5
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCC----hhHhhcCC-CCcEEEcccCCCCCCCCccCcCC-----C
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIP----TQLCKWFP-YLVSLDLSNNDLSGTIPHELGNC-----V 129 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip----~~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~ 129 (538)
.++|+.|+++|.+|..+...++|++|+|++|.+++..+ ..+.. ++ +|++|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~-~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFAN-TPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHT-CCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHh-CCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 46899999999999988888889999999999996555 44444 77 89999999999998878777765 9
Q ss_pred CCcEeeecCccccCCCCccccC----C-ccccEEecccccCCCCCCccc
Q 040267 130 YLNTLYLSYNRLSGPLPPQLSS----L-VRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 130 ~L~~L~ls~N~l~g~~p~~l~~----l-~~L~~l~l~~N~l~g~~p~~~ 173 (538)
+|++|+|++|.+++..+..+.. + ++|+.|++++|.+++..+..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 129 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF 129 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH
Confidence 9999999999999877765544 4 899999999999998766554
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.00 E-value=5.2e-10 Score=107.86 Aligned_cols=137 Identities=15% Similarity=0.021 Sum_probs=101.2
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCC-CCCC-----------cccE
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLK-HPNL-----------EKPL 341 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~ni-----------~~~l 341 (538)
+....++|.....++.|+.+.||++.. +++.+++|...... .....+.+|+++++.+. |..+ ..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 334455677777788888899999985 46899999986422 22346889999998885 3333 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC------------------------------------ 385 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------ 385 (538)
||||++|.+|.+.+. +......++.+++++|+.||+.
T Consensus 88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 999999999987632 1123457889999999999981
Q ss_pred --------------------CCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 386 --------------------CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 386 --------------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
....++|+|++|.||+++++..+.|+||+.+...
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 0144899999999999987656679999886543
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.97 E-value=4e-11 Score=115.21 Aligned_cols=142 Identities=20% Similarity=0.167 Sum_probs=96.6
Q ss_pred CCCcccccccCCCCCCCEEEEEcCC---CCccccCccc------------------------ccCCCCCCe--EEccCCc
Q 040267 41 FICRFNGVSCWNGLENRILSLELEE---MNLSGQVPES------------------------LQSCKSLQV--LNLSTNN 91 (538)
Q Consensus 41 ~~c~w~gv~C~~~~~~~l~~L~L~~---n~l~g~~p~~------------------------~~~l~~L~~--L~Ls~N~ 91 (538)
..|+|.|+.|+.+ ..+|+.+...+ ..+.|.++++ |...+.|.. ++++.|.
T Consensus 76 ~l~~~~g~i~~~~-~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 76 ALKAVNYKILDRE-NRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHHTTSSCBCTT-SCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHHhcCcEEECCC-CCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 4689999999753 24666665544 2334444321 222333443 5667774
Q ss_pred CCCcCChh---HhhcCCCCcEEEcccCCCCC--CCCccCcCCCCCcEeeecCccccCCCCccccCCc--cccEEeccccc
Q 040267 92 LFGKIPTQ---LCKWFPYLVSLDLSNNDLSG--TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLV--RLKQFSVAYNC 164 (538)
Q Consensus 92 l~g~ip~~---~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~--~L~~l~l~~N~ 164 (538)
.. .++.. +...+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 33 33322 22348999999999999997 5667778999999999999999974 3344454 89999999999
Q ss_pred CCCCCCc-------ccccccccccccccc
Q 040267 165 LSGRIPS-------FFNGAMKMDMLADSR 186 (538)
Q Consensus 165 l~g~~p~-------~~~~~~~l~~~~~~~ 186 (538)
+++.+|. .+..+++|..++...
T Consensus 232 l~~~~~~~~~y~~~il~~~P~L~~LDg~~ 260 (267)
T 3rw6_A 232 LCDTFRDQSTYISAIRERFPKLLRLDGHE 260 (267)
T ss_dssp TGGGCSSHHHHHHHHHHHCTTCCEESSCB
T ss_pred CccccCcchhHHHHHHHHCcccCeECCcC
Confidence 9988773 245667777776544
No 392
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.95 E-value=3.2e-10 Score=108.90 Aligned_cols=119 Identities=13% Similarity=0.074 Sum_probs=88.0
Q ss_pred eecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-------------cccEEEeecCCCCHHHHh
Q 040267 289 VSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------------EKPLVYKYMSNGTLYSLL 355 (538)
Q Consensus 289 g~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~e~~~~gsL~~~l 355 (538)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.++ ..++||||++|.+|. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355668999998777888999997653 22457789999888865454 237999999998884 2
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------------
Q 040267 356 HSNGNTALDWPSRLRIGLGAARGLSWLHHCC------------------------------------------------- 386 (538)
Q Consensus 356 ~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------------------- 386 (538)
.. .+ ...++.++++.|+.||+..
T Consensus 105 ~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (264)
T 1nd4_A 105 SH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA 176 (264)
T ss_dssp SC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred Cc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence 11 12 2367788888888888721
Q ss_pred ------CCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 387 ------HPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 387 ------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
...++|+|++|.||+++++..+.|.||+.+...
T Consensus 177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112999999999999987766779999997654
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.86 E-value=1.2e-10 Score=121.77 Aligned_cols=127 Identities=21% Similarity=0.186 Sum_probs=97.4
Q ss_pred CCEEEEEcCCCCcccc----CcccccCCCCCCeEEccCCcCCCcCChhHhhc----CCCCcEEEcccCCCCCC----CCc
Q 040267 56 NRILSLELEEMNLSGQ----VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW----FPYLVSLDLSNNDLSGT----IPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~----l~~L~~L~Ls~N~l~g~----~p~ 123 (538)
.+++.|+|++|++++. ++..+..+++|++|+|++|.+++..+..+... .++|++|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5799999999999865 67778889999999999999876555444431 26899999999998865 566
Q ss_pred cCcCCCCCcEeeecCccccCCCCccccC-----CccccEEecccccCCC----CCCcccccccccccc
Q 040267 124 ELGNCVYLNTLYLSYNRLSGPLPPQLSS-----LVRLKQFSVAYNCLSG----RIPSFFNGAMKMDML 182 (538)
Q Consensus 124 ~~~~l~~L~~L~ls~N~l~g~~p~~l~~-----l~~L~~l~l~~N~l~g----~~p~~~~~~~~l~~~ 182 (538)
.+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++|..+
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL 403 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEE
Confidence 6778899999999999988655554442 6789999999999886 667666555555443
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.86 E-value=7.3e-11 Score=123.47 Aligned_cols=117 Identities=18% Similarity=0.154 Sum_probs=93.9
Q ss_pred CCEEEEEcCCCCccccC-----cccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCCCCCCccCc
Q 040267 56 NRILSLELEEMNLSGQV-----PESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.+++.|+|++|.+++.- +..+..+++|+.|+|++|.+++. +|..+.. +++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA-KESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH-CTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh-CCCcceEECCCCCCchHHHHHHH
Confidence 56999999999998643 23334689999999999999964 6777766 99999999999999765444433
Q ss_pred -----CCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCCCCCccc
Q 040267 127 -----NCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 127 -----~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
..++|+.|+|++|.+++. +|..+..+++|+.|++++|.+++..+..+
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 361 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHH
Confidence 337999999999999976 57778888999999999999987644433
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=4.6e-09 Score=103.63 Aligned_cols=154 Identities=19% Similarity=0.172 Sum_probs=111.8
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC----------------cccEEEeecC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL----------------EKPLVYKYMS 347 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni----------------~~~lv~e~~~ 347 (538)
.+.++.|....||+.. ..+++|..... .....+.+|.++++.+. +..+ ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4568999999999863 46888886532 23467889999998873 3333 3478999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC------------------------------------------ 385 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------------ 385 (538)
|.++.+.... .++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 100 GVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9888654332 367778888888888888888851
Q ss_pred -------------CCCCccccCCCCCCeeeCC--CCCeEEEeccCCcccCCC------------------------CCCc
Q 040267 386 -------------CHPPCLHQNISSSVILVDE--DFDARIMDFGFSRLTNGD------------------------ASLQ 426 (538)
Q Consensus 386 -------------~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~------------------------~~~~ 426 (538)
....++|+|++|.||++++ ...+.|.||+.+...... |...
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1135799999999999998 456789999987643211 1111
Q ss_pred ------------cCcccHHHHHHHHHhCCCCCC
Q 040267 427 ------------KDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 427 ------------~DV~S~Gvvl~elltg~~p~~ 447 (538)
.+.|++|.++|++.+|..+|.
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 378889999999998887664
No 396
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.78 E-value=1.1e-08 Score=103.46 Aligned_cols=130 Identities=12% Similarity=0.153 Sum_probs=95.9
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcc--ccc--ccHHHHHHHHHHHhcCCCCCC----------------cccEEEe
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLS--ACK--LGEKQFLLEMKQVGLLKHPNL----------------EKPLVYK 344 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~E~~~l~~l~H~ni----------------~~~lv~e 344 (538)
.+.++.|.++.||+.... +..+++|+.. ... .....+.+|+++++.+.+.++ ..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456889999999999875 4678888876 332 223568889999998874333 2579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-------------------------------------- 386 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------- 386 (538)
|+++..+.+... ..++..++..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999877754211 24778889999999999999999720
Q ss_pred -----------------CCCccccCCCCCCeeeCCCCC--eEEEeccCCccc
Q 040267 387 -----------------HPPCLHQNISSSVILVDEDFD--ARIMDFGFSRLT 419 (538)
Q Consensus 387 -----------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~ 419 (538)
...++|+|++|.||+++.++. +.|.||+.+..-
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 256999999999999997753 689999988653
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=5e-09 Score=100.55 Aligned_cols=80 Identities=29% Similarity=0.391 Sum_probs=66.6
Q ss_pred cCCCCCCeEEccCCcCCC--cCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCC--CCcEeeecCccccCCCCc-----
Q 040267 77 QSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCV--YLNTLYLSYNRLSGPLPP----- 147 (538)
Q Consensus 77 ~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~ls~N~l~g~~p~----- 147 (538)
.++++|+.|+|++|+|++ .+|..+.. +++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~-l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHH-STTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhh-CCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 468999999999999997 66777666 99999999999999965 3344444 999999999999988873
Q ss_pred --cccCCccccEEe
Q 040267 148 --QLSSLVRLKQFS 159 (538)
Q Consensus 148 --~l~~l~~L~~l~ 159 (538)
.+..+++|+.||
T Consensus 244 ~~il~~~P~L~~LD 257 (267)
T 3rw6_A 244 SAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHCTTCCEES
T ss_pred HHHHHHCcccCeEC
Confidence 367788888876
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.66 E-value=3.6e-09 Score=107.45 Aligned_cols=112 Identities=23% Similarity=0.204 Sum_probs=79.9
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhh----cCCCCcEEEcccCCCCC----CCCccCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCK----WFPYLVSLDLSNNDLSG----TIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~----~l~~L~~L~Ls~N~l~g----~~p~~~~ 126 (538)
..++.|+|++|+++..-...+. .+++|+.|+|++|.|+..-...++. ..++|++|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4689999999998754333333 3567888999999887543333332 24678899999988864 2444456
Q ss_pred CCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCC
Q 040267 127 NCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
.+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 788888999999888742 35556677788889999888875
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.56 E-value=1.2e-09 Score=111.01 Aligned_cols=112 Identities=21% Similarity=0.169 Sum_probs=87.2
Q ss_pred CCEEEEEcCCCCccccCcccccC-----CCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccC-----
Q 040267 56 NRILSLELEEMNLSGQVPESLQS-----CKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL----- 125 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~----- 125 (538)
..++.|+|++|+++..-...+.. .++|+.|+|++|.++..-...+...+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46899999999998654443332 37999999999999855445555557889999999999975444333
Q ss_pred cCCCCCcEeeecCccccC----CCCccccCCccccEEecccccCCC
Q 040267 126 GNCVYLNTLYLSYNRLSG----PLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 126 ~~l~~L~~L~ls~N~l~g----~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 356889999999999974 245566788999999999999875
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=1.4e-07 Score=94.04 Aligned_cols=77 Identities=22% Similarity=0.240 Sum_probs=52.1
Q ss_pred CCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcccc-EEecccccCCCCCCcccccccccccc
Q 040267 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLK-QFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 104 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~-~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++..-+..|.+|++|+ .+++.+ .++..-+..|.++.+|..+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 567778888877777444446777888888888777 6644456677777787 777777 5654445666666655544
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.48 E-value=1.6e-08 Score=109.14 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=90.2
Q ss_pred CCEEEEEcCCCCccccCcccccC-CCCCCeEEcc----CCcCCCc-----CChhHhhcCCCCcEEEcccC--CCCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQS-CKSLQVLNLS----TNNLFGK-----IPTQLCKWFPYLVSLDLSNN--DLSGTIPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----ip~~~~~~l~~L~~L~Ls~N--~l~g~~p~ 123 (538)
.+++.|+|+.|++++..+..++. +++|+.|+|+ .|.+++. ++..+.. +++|+.|+|++| .+++..+.
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~-~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIG-CKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHH-CTTCCEEEEECCGGGCCHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHh-CCCCCEEEEecCCCCccHHHHH
Confidence 46889999889998887777776 8899999996 7788853 4444444 889999999753 36665555
Q ss_pred cCc-CCCCCcEeeecCccccC-CCCccccCCccccEEecccccCCCC-CCccccccccccc
Q 040267 124 ELG-NCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGR-IPSFFNGAMKMDM 181 (538)
Q Consensus 124 ~~~-~l~~L~~L~ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~~ 181 (538)
.++ .+++|++|+|++|++++ .++..+.++++|+.|++++|.+++. ++..+..+++|+.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 517 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRY 517 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCE
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCe
Confidence 554 37889999999998876 3556667888899999999988654 3333334444443
No 402
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=5.2e-07 Score=89.48 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=97.4
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC--CCC---------cccEEEeecCCC
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH--PNL---------EKPLVYKYMSNG 349 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H--~ni---------~~~lv~e~~~~g 349 (538)
.....+.++.|....||+. +..+++|...... ....+.+|.+++..+.+ ..+ ..++||||++|.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~~~~~lvme~i~G~ 112 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKGE 112 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEECSSCEEEECCCCB
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEecCCcEEEEeecCCc
Confidence 4556678999999999998 6678888764322 23568899999888876 222 357999999998
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC------------------------------------------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCH------------------------------------------ 387 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~------------------------------------------ 387 (538)
++.+.... .++..++..++.++++.++.||+...
T Consensus 113 ~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
T 3r70_A 113 RITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEH 188 (320)
T ss_dssp CCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred cccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHH
Confidence 88643321 36677778888888888888885221
Q ss_pred ------------------CCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 388 ------------------PPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 388 ------------------~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
..++|+|++|.||+++++..+.|.||+.+...
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 189 IETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23499999999999998666799999998654
No 403
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=3.7e-08 Score=89.64 Aligned_cols=110 Identities=16% Similarity=0.204 Sum_probs=81.3
Q ss_pred CCEEEEEcCCC-Ccccc----CcccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCCCC----CC
Q 040267 56 NRILSLELEEM-NLSGQ----VPESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLSGT----IP 122 (538)
Q Consensus 56 ~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p 122 (538)
..++.|+|++| ++... +...+...++|++|+|++|.+... +...+.. .+.|++|+|++|.++.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~-n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV-NNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHH-CSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHh-CCCcCEEECcCCcCCHHHHHHHH
Confidence 46899999998 88642 455677788999999999998742 2333333 57899999999998743 45
Q ss_pred ccCcCCCCCcEeee--cCccccCC----CCccccCCccccEEecccccCC
Q 040267 123 HELGNCVYLNTLYL--SYNRLSGP----LPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 123 ~~~~~l~~L~~L~l--s~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
..+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777788999999 78888743 3344555678999999888775
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=2.9e-07 Score=91.72 Aligned_cols=124 Identities=18% Similarity=0.142 Sum_probs=87.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCc-Ee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN-TL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L 134 (538)
..+..+.+.++-...........+++|+.|+|++|+++ .||...+..+.+|+.|+|++| +...-+..|.+|++|+ .+
T Consensus 202 ~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 202 RDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 34566666544222111111123788888888888888 788777777888888888887 6644455788888888 88
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++.+ +++..-+..|.+|++|+.+++++|.++..-+..|.++++|+.+
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 8887 6664456788888888888888888886666677777766543
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.33 E-value=2.2e-07 Score=100.21 Aligned_cols=105 Identities=12% Similarity=0.187 Sum_probs=74.7
Q ss_pred CEEEEEcCCCC-ccc-cCcccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCC----CCCCccCc
Q 040267 57 RILSLELEEMN-LSG-QVPESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLS----GTIPHELG 126 (538)
Q Consensus 57 ~l~~L~L~~n~-l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~ 126 (538)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+.. +++|++|+|++|.++ +.++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~-~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH-NTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH-CCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc-CCCccEEEeeccCCCccCHHHHHHHHh
Confidence 48888888876 221 2233344788888888888888755 3333344 888888888888887 34444566
Q ss_pred CCCCCcEeeecCccccCCCCccccCCccccEEecccc
Q 040267 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N 163 (538)
++++|+.|+|++|.+++ +|..+.++++|+.|+++.+
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 78888888888888885 6777777788888887753
No 406
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.23 E-value=3.1e-06 Score=82.47 Aligned_cols=132 Identities=19% Similarity=0.200 Sum_probs=86.9
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCC-C---------cccEEEeecCCCCHH-
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPN-L---------EKPLVYKYMSNGTLY- 352 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~n-i---------~~~lv~e~~~~gsL~- 352 (538)
.+.|+.|.++.||++...+|+.+++|+..... .....|..|++.|+.+++.+ + ..++||||++++++.
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~~~lvme~l~g~~~~~ 99 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERPPTP 99 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCCCCH
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEecCcEEEEEecccCCCCh
Confidence 46799999999999998889999999975422 23467899999999998753 2 357999999998742
Q ss_pred -------HH---hhcCCCC-------------------CCCHHHHH---HH-----------------HHHHHHHHHHHh
Q 040267 353 -------SL---LHSNGNT-------------------ALDWPSRL---RI-----------------GLGAARGLSWLH 383 (538)
Q Consensus 353 -------~~---l~~~~~~-------------------~l~~~~~~---~i-----------------~~~ia~~L~yLH 383 (538)
+. +|..... .-+|.... ++ ...+-+.++.+.
T Consensus 100 ~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~~l~ 179 (288)
T 3d1u_A 100 EAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLDALD 179 (288)
T ss_dssp HHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 11 2322110 01343321 00 111112222232
Q ss_pred ----cCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 384 ----HCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 384 ----~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
....+.++|+|+.|.||+++.+ .+.|.|| .+..
T Consensus 180 ~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~~ 216 (288)
T 3d1u_A 180 HLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAHG 216 (288)
T ss_dssp HHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCEE
T ss_pred HHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcCC
Confidence 2234679999999999999884 5889999 6543
No 407
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.16 E-value=1.5e-07 Score=101.47 Aligned_cols=122 Identities=20% Similarity=0.247 Sum_probs=74.2
Q ss_pred CEEEEEcCCCCccccCccccc-CCCCCCeEEccCC-cCCCc-CChhHhhcCCCCcEEEcccCCCCCCCCccC----cCCC
Q 040267 57 RILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTN-NLFGK-IPTQLCKWFPYLVSLDLSNNDLSGTIPHEL----GNCV 129 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l~ 129 (538)
+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.. +++|++|+|++|.+++..+..+ ..++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~-~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAAT-CRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHH-CTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHh-CCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 577777777777766666665 5777888887777 44432 3333323 7778888887777665444333 3566
Q ss_pred CCcEeeecCccccCCCC-----ccccCCccccEEecccc-cCCCCCCcccccccccccc
Q 040267 130 YLNTLYLSYNRLSGPLP-----PQLSSLVRLKQFSVAYN-CLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 130 ~L~~L~ls~N~l~g~~p-----~~l~~l~~L~~l~l~~N-~l~g~~p~~~~~~~~l~~~ 182 (538)
+|+.|+|++|. +.++ ..+.++++|+.|++++| .+++ +|..+..+++|..+
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L 240 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEEL 240 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEE
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEc
Confidence 77788877776 2222 11234577777777777 3333 55555555555444
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.12 E-value=8.1e-06 Score=80.28 Aligned_cols=125 Identities=16% Similarity=0.156 Sum_probs=86.6
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCC-CC--------------cccEEEeecCCCC
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHP-NL--------------EKPLVYKYMSNGT 350 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~-ni--------------~~~lv~e~~~~gs 350 (538)
+.++.|....||+. |..+++|.-.. ......+.+|.++|..+.+. .+ ..++||||++|.+
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 46788888899987 56788887432 22346788999999998652 22 2579999999988
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 040267 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC--------------------------------------------- 385 (538)
Q Consensus 351 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------------------------- 385 (538)
+.+.... .++..++..++.++++.|+.||+.
T Consensus 100 l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 100 LGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred Cchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 7763211 234445555555555555555541
Q ss_pred ------------CCCCccccCCCCCCeeeCC---CCCe-EEEeccCCccc
Q 040267 386 ------------CHPPCLHQNISSSVILVDE---DFDA-RIMDFGFSRLT 419 (538)
Q Consensus 386 ------------~~~~ivH~Dlkp~NIll~~---~~~~-kl~Dfg~a~~~ 419 (538)
....++|+|++|.||+++. ++.+ .|.||+.+..-
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999997 4554 89999988764
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.10 E-value=3e-07 Score=99.08 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=91.5
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEcc--C----CcCCCc-----CChhHhhcCCCCcEEEcccCCCCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLS--T----NNLFGK-----IPTQLCKWFPYLVSLDLSNNDLSGTIPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g~-----ip~~~~~~l~~L~~L~Ls~N~l~g~~p~ 123 (538)
.+++.|++..|++++.....+. .+++|+.|+|+ + |.+++. ++..+.. +++|+.|+|++ .+++..+.
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~-~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEH-CKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHH-CTTCCEEECCS-SCCHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhh-CCCccEEeecC-cccHHHHH
Confidence 4688999999999987777776 58999999999 4 666621 2222334 89999999977 67766666
Q ss_pred cCcC-CCCCcEeeecCccccCCCCccc-cCCccccEEecccccCCCCCCc-ccccccccccc
Q 040267 124 ELGN-CVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPS-FFNGAMKMDML 182 (538)
Q Consensus 124 ~~~~-l~~L~~L~ls~N~l~g~~p~~l-~~l~~L~~l~l~~N~l~g~~p~-~~~~~~~l~~~ 182 (538)
.++. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ....+++|+.+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 511 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSL 511 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEE
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEE
Confidence 6665 8999999999999986555555 6689999999999999654332 23334555444
No 410
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.91 E-value=2.1e-05 Score=79.21 Aligned_cols=132 Identities=12% Similarity=0.158 Sum_probs=81.7
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------------cccEEEeecCCC
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------------EKPLVYKYMSNG 349 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------------~~~lv~e~~~~g 349 (538)
..+.++.|....+|+... ++..+++|..... ..+..|..++..+....+ ..++||||+++.
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 346688999999999886 5788999987542 358889888888764343 246999999976
Q ss_pred CHHHH------------------hhcCCCC---------------CCCHHHHH---------------------HHHHHH
Q 040267 350 TLYSL------------------LHSNGNT---------------ALDWPSRL---------------------RIGLGA 375 (538)
Q Consensus 350 sL~~~------------------l~~~~~~---------------~l~~~~~~---------------------~i~~~i 375 (538)
++.+. |+..... .-+|...+ .....+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 55321 1111000 00111110 111111
Q ss_pred HHHHHHHhcC-CCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 376 ARGLSWLHHC-CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 376 a~~L~yLH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
..-++++... ..+.++|+|+.|.||+++++..+.|.||+.+..-.
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 2222233221 11468999999999999877778899999887643
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.89 E-value=9.2e-07 Score=89.08 Aligned_cols=109 Identities=15% Similarity=0.128 Sum_probs=76.9
Q ss_pred CCEEEEEcCCCC-ccccCcccccCCCCCCeEEccCCcCCCcCChhHhh-cCCCCcEEEccc--CCCCCC-----CCccC-
Q 040267 56 NRILSLELEEMN-LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK-WFPYLVSLDLSN--NDLSGT-----IPHEL- 125 (538)
Q Consensus 56 ~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~l~~L~~L~Ls~--N~l~g~-----~p~~~- 125 (538)
++++.|+|++|. + .+++ +. +++|+.|+|..|.++......+.. .+|+|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 579999998873 3 2444 43 899999999998887544444442 389999999963 222221 11122
Q ss_pred -cCCCCCcEeeecCccccCCCCcccc---CCccccEEecccccCCCC
Q 040267 126 -GNCVYLNTLYLSYNRLSGPLPPQLS---SLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 126 -~~l~~L~~L~ls~N~l~g~~p~~l~---~l~~L~~l~l~~N~l~g~ 168 (538)
..+++|++|+|++|.+++..+..+. .+++|+.|+|+.|.+++.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3579999999999999854443343 578999999999999864
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.86 E-value=2.9e-06 Score=76.94 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=75.3
Q ss_pred ccCcccccCCCCCCeEEccCC-cCCCc----CChhHhhcCCCCcEEEcccCCCCCC----CCccCcCCCCCcEeeecCcc
Q 040267 70 GQVPESLQSCKSLQVLNLSTN-NLFGK----IPTQLCKWFPYLVSLDLSNNDLSGT----IPHELGNCVYLNTLYLSYNR 140 (538)
Q Consensus 70 g~~p~~~~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~ 140 (538)
..+...+...++|++|+|++| .+... +...+.. .++|++|+|++|.+... +...+...++|++|+|++|.
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~-~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKT-NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTT-CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHh-CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 345566788999999999999 88743 2233333 68899999999999742 33445567899999999999
Q ss_pred ccCC----CCccccCCccccEEec--ccccCCCC
Q 040267 141 LSGP----LPPQLSSLVRLKQFSV--AYNCLSGR 168 (538)
Q Consensus 141 l~g~----~p~~l~~l~~L~~l~l--~~N~l~g~ 168 (538)
|+.. +...+...++|+.|+| ++|.++..
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 9853 4566777889999999 88998753
No 413
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.79 E-value=7.1e-05 Score=71.82 Aligned_cols=125 Identities=19% Similarity=0.128 Sum_probs=84.9
Q ss_pred eEeecCCc-eEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCC----CCC--------cccEEEeecCCCCHH
Q 040267 287 VLVSTWTG-TTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH----PNL--------EKPLVYKYMSNGTLY 352 (538)
Q Consensus 287 ~ig~G~~g-~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H----~ni--------~~~lv~e~~~~gsL~ 352 (538)
.+..|..+ .||+.... ++..+++|+-... ....+.+|...|+.+.. |.+ ..++|||++++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 35556555 58988754 4678899986532 24567889999887742 222 347999999998887
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 040267 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC----------------------------------------------- 385 (538)
Q Consensus 353 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~----------------------------------------------- 385 (538)
+..... ......++.+++..|+-||+.
T Consensus 109 ~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 109 QVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred ccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 765432 123334556666666666631
Q ss_pred --------CCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 386 --------CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 386 --------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
....++|+|+.+.||++++++.+-|.||+.+..-
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 0113789999999999998777779999987654
No 414
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.71 E-value=6.2e-05 Score=76.86 Aligned_cols=117 Identities=13% Similarity=0.137 Sum_probs=76.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.+.|.+ +++..-+..|.+|++|+.++|++|+++ .||...+. ..+|+.+.|.+| +...-...|.+|++|+.++|
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477777775 666555677888889999999888888 78877777 678888888744 65444556778888888888
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
..| ++..-...|.+ .+|+.+.+ .|.++..-+..|.++.+|.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 764 43222334444 55666666 3334433344455444443
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.70 E-value=6.6e-05 Score=76.68 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=62.9
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCC-----CCCCccCcCCCCC
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS-----GTIPHELGNCVYL 131 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L 131 (538)
+++.|+|+++ ++..-...|.+ .+|+.+.| .|+++ .|+...+..+++|+.+++.+|.+. ..-+..|.+|++|
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 4666777653 44333344555 56677766 34454 555555555667777777666553 1223456666677
Q ss_pred cEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccc
Q 040267 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 132 ~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
+.++|. |.++-.-...|.+|.+|+.+++..| ++..-+..|.++
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 777666 3355333455666666777766444 443333444443
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.65 E-value=1.3e-05 Score=80.70 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=75.8
Q ss_pred CCEEEEEcCCCCc---------cccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCc
Q 040267 56 NRILSLELEEMNL---------SGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l---------~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.+|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+|. + . +++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~-~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-P-RPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-B-CTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-c-CCCCcEEEEecCCCChHHHHHHH
Confidence 4688888876543 1235566778899999999988412 3554 2 4 78999999998887644333443
Q ss_pred --CCCCCcEeeecC--ccccCC-----CCccc--cCCccccEEecccccCCCCCC
Q 040267 127 --NCVYLNTLYLSY--NRLSGP-----LPPQL--SSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 127 --~l~~L~~L~ls~--N~l~g~-----~p~~l--~~l~~L~~l~l~~N~l~g~~p 170 (538)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|.+|.++...+
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~ 269 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVV 269 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHH
Confidence 789999999964 332222 11122 247899999999998875433
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.65 E-value=2.9e-05 Score=77.88 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.9
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
..++|+|+.|.||+++++..+.|.||+.+..-
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g 253 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVALG 253 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCEEE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccccC
Confidence 57899999999999996545789999987653
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.55 E-value=0.00016 Score=71.78 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=35.0
Q ss_pred CCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHH
Q 040267 387 HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLEL 439 (538)
Q Consensus 387 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~el 439 (538)
...++|+|+++.||+++.++.+.|.||+.+..-. -+|-++.++..+
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~-------~~~Dla~~l~~~ 266 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDL-------PIRDLRKMIIPL 266 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEECC-------THHHHHHHHHHH
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcccCC-------hHHHHHHHHHHH
Confidence 4789999999999999888899999999865432 234455555555
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.52 E-value=0.00017 Score=73.38 Aligned_cols=64 Identities=13% Similarity=0.013 Sum_probs=42.9
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc--------ccHHHHHHHHHHHhcCCC------CCC------cccEEEe
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--------LGEKQFLLEMKQVGLLKH------PNL------EKPLVYK 344 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~H------~ni------~~~lv~e 344 (538)
+.+|.|..+.||++... +++.++||...... ....++..|.+++..+.. |.+ ..++|||
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvmE 115 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME 115 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEEE
Confidence 56899999999999854 46889999864311 123456778888877632 222 3469999
Q ss_pred ecCCC
Q 040267 345 YMSNG 349 (538)
Q Consensus 345 ~~~~g 349 (538)
|+++.
T Consensus 116 ~l~g~ 120 (397)
T 2olc_A 116 DLSHL 120 (397)
T ss_dssp CCTTS
T ss_pred eCCCc
Confidence 99763
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.37 E-value=8.2e-05 Score=66.16 Aligned_cols=84 Identities=10% Similarity=0.112 Sum_probs=53.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc-CCCcCChhHhhc---CCCCcEEEcccCC-CCCCCCccCcCCCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFGKIPTQLCKW---FPYLVSLDLSNND-LSGTIPHELGNCVY 130 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~~---l~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 130 (538)
-+++.|||+++.++..--..+..+++|+.|+|+++. ++..--..+... .++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 358888988888775544567788888888888885 553222233330 1357888888764 65332334556666
Q ss_pred CcEeeecCc
Q 040267 131 LNTLYLSYN 139 (538)
Q Consensus 131 L~~L~ls~N 139 (538)
|+.|+|++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 677766654
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.22 E-value=0.0022 Score=61.98 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=50.0
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCC-CCC---------cccEEEeecCCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKH-PNL---------EKPLVYKYMSNGT 350 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H-~ni---------~~~lv~e~~~~gs 350 (538)
.+.+|.|..+.||+....+|+.|.+|+-.... .....|..|.+.|+.+.- ..+ ..++||||++.+.
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeecccC
Confidence 45689999999999999999999999876433 223457889998888742 222 4468999998764
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.11 E-value=9.4e-05 Score=65.78 Aligned_cols=92 Identities=9% Similarity=0.048 Sum_probs=64.5
Q ss_pred CcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC-CCCCCCccCcCC----CCCcEeeecCcc-ccCCC
Q 040267 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND-LSGTIPHELGNC----VYLNTLYLSYNR-LSGPL 145 (538)
Q Consensus 72 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~ls~N~-l~g~~ 145 (538)
+|.....--.|+.|||+++.++..=-..+.. +++|+.|+|+++. ++..--..++.+ ++|++|+|+++. +|..=
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~-~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEG-LQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTT-CSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcC-CCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 3443323347999999999987543344554 9999999999985 664433445554 479999999974 76422
Q ss_pred CccccCCccccEEeccccc
Q 040267 146 PPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 146 p~~l~~l~~L~~l~l~~N~ 164 (538)
=..+.++++|+.|+++++.
T Consensus 132 l~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHGGGCTTCCEEEEESCT
T ss_pred HHHHhcCCCCCEEECCCCC
Confidence 2346788999999999875
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.02 E-value=0.0008 Score=56.81 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=26.2
Q ss_pred EEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCC
Q 040267 60 SLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117 (538)
Q Consensus 60 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l 117 (538)
.++.++++|+ ..+|..+ -++|+.|+|++|+|+ .+|...+..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 3444555554 2334321 124555555555555 44444444455555555555544
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.99 E-value=0.0012 Score=64.32 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=70.2
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC----CCC------cccEEEeec-CCCCHH
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH----PNL------EKPLVYKYM-SNGTLY 352 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H----~ni------~~~lv~e~~-~~gsL~ 352 (538)
..+.|+.|....+|+. ..+++|+............+|+.+++.+.. |.+ ..++++||+ ++.++.
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTCCEEEECCTTCEECC
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEECCCCEEEEeecCCCccCC
Confidence 3577889999999998 568888876432111123457777666532 333 256899999 553332
Q ss_pred H------------------HhhcCCC---CCCCH-HHHHHHHHH--------------HHHHHH----HHhc-CCCCCcc
Q 040267 353 S------------------LLHSNGN---TALDW-PSRLRIGLG--------------AARGLS----WLHH-CCHPPCL 391 (538)
Q Consensus 353 ~------------------~l~~~~~---~~l~~-~~~~~i~~~--------------ia~~L~----yLH~-~~~~~iv 391 (538)
. .+|.... ...+. ....++... +...+. .+.. .....++
T Consensus 97 ~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~ 176 (301)
T 3dxq_A 97 PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAAC 176 (301)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEE
T ss_pred HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceee
Confidence 1 0111110 00111 111111100 111111 1111 1234589
Q ss_pred ccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 392 HQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 392 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+|+.|.||+ .+++.+.++||..+..-
T Consensus 177 HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 177 HCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 9999999999 55678899999887654
No 425
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.97 E-value=0.0054 Score=60.28 Aligned_cols=130 Identities=13% Similarity=0.071 Sum_probs=76.8
Q ss_pred eEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC-----CCCc-------------ccEEEeecCC
Q 040267 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH-----PNLE-------------KPLVYKYMSN 348 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H-----~ni~-------------~~lv~e~~~~ 348 (538)
.++ |....||+....+|+.+++|...........+..|..++..+.. |.+. .+++|||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 466 77889999887778789999987543445677778887776642 2221 1468999987
Q ss_pred CCHH-----HH---------hhc----CC---CCCCCHHHH----HHH---------------HHHHHHHHHHHhc----
Q 040267 349 GTLY-----SL---------LHS----NG---NTALDWPSR----LRI---------------GLGAARGLSWLHH---- 384 (538)
Q Consensus 349 gsL~-----~~---------l~~----~~---~~~l~~~~~----~~i---------------~~~ia~~L~yLH~---- 384 (538)
..+. .+ +|. .. ...+++... ..+ ...+...++.+.+
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4321 11 111 00 011222211 001 1111112223221
Q ss_pred CCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 385 CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 385 ~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
.....++|+|+++.||+++ + .+.|.||+.+..-
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 1235689999999999999 4 8999999887654
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.87 E-value=0.0017 Score=63.73 Aligned_cols=161 Identities=9% Similarity=0.066 Sum_probs=88.8
Q ss_pred cCHHHHHHHhcCCCCC-----CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC-----CCCc-
Q 040267 270 LKLVHLIAATSNFSAQ-----NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH-----PNLE- 338 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~-----~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H-----~ni~- 338 (538)
++.+++......|... +.|+.|....+|+....+| .+++|..... ...+++..|+.++..+.. |.+.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 4555666655556542 3355677788999987666 6888988652 122345667777666532 2221
Q ss_pred -------------ccEEEeecCCCCHHH--------------HhhcC----CCC---C---CCHHHHHH-----------
Q 040267 339 -------------KPLVYKYMSNGTLYS--------------LLHSN----GNT---A---LDWPSRLR----------- 370 (538)
Q Consensus 339 -------------~~lv~e~~~~gsL~~--------------~l~~~----~~~---~---l~~~~~~~----------- 370 (538)
.+++++|++|..+.. .+|.. ... . ..|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 258999998754311 01211 000 0 12332111
Q ss_pred -HHHHHHHHHHHHhc----CCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHH
Q 040267 371 -IGLGAARGLSWLHH----CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLEL 439 (538)
Q Consensus 371 -i~~~ia~~L~yLH~----~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~el 439 (538)
+...+...++++++ .....++|+|+.+.||+++++..+.|.||+.+..- .=+|-+++++..+
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g-------~~~~Dla~~l~~~ 231 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACND-------LLAYDVSICLNAW 231 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE-------EHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCc-------hhHHHHHHHHHHH
Confidence 01123445555553 12356999999999999988766689999886542 1234455555544
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.81 E-value=0.0017 Score=54.70 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=17.5
Q ss_pred CcEeeecCccccCCCCccccCCccccEEecccccCC
Q 040267 131 LNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 131 L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 444444444444322334445555555555555543
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.69 E-value=0.0053 Score=62.84 Aligned_cols=31 Identities=19% Similarity=0.406 Sum_probs=27.7
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
..++|+|++|.||+++.++ +++.||+.+..-
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 7899999999999998876 999999987754
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.61 E-value=0.0034 Score=61.46 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=79.3
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC------CCC--------cccEEEeecCCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH------PNL--------EKPLVYKYMSNGT 350 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H------~ni--------~~~lv~e~~~~gs 350 (538)
.+.|+.|....+|+... ++..+++|..... ....+..|.+.|+.+.. |.+ ..++||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 35688999999999886 5678889987543 35668889888887742 222 2479999999875
Q ss_pred HH--------H---HhhcCCC-C-------------------CCCHHHHH---HHHH----------------HHHHH-H
Q 040267 351 LY--------S---LLHSNGN-T-------------------ALDWPSRL---RIGL----------------GAARG-L 379 (538)
Q Consensus 351 L~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~~----------------~ia~~-L 379 (538)
+. + .+|.... . .-+|.... ++.. .+... .
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 42 1 1222211 0 12455322 1111 11111 2
Q ss_pred HHHhc-CCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 380 SWLHH-CCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 380 ~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23421 2346799999999999999887 8899973
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.56 E-value=0.0031 Score=64.82 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=43.8
Q ss_pred CeEeecCCceEEEEEeCC--------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.|+.|....+|+....+ +..+++|+.... .....+.+|..++..+...++ ...+|+||+++.
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~g~v~e~l~G~ 157 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSR 157 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCEEEEEeCCc
Confidence 457788889999998753 578999988432 222566689998888754344 123799999863
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.55 E-value=0.0039 Score=64.50 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=42.0
Q ss_pred CeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNGT 350 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~gs 350 (538)
+.|+.|....+|+....+ +..+++|+............+|..++..+...++ ...+||||+++.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETTEEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCCeEEEEeeCCcc
Confidence 457788889999998765 4788899875422111122578888888865555 2237999998743
No 432
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.53 E-value=0.0035 Score=63.10 Aligned_cols=148 Identities=16% Similarity=0.166 Sum_probs=87.3
Q ss_pred CeEeecCCceEEEEEeCC--------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.+..|-...+|+....+ ++.+++|+..........+.+|.++++.+.-.++ ...+||||++|.
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g~v~e~i~G~ 135 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSR 135 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCSEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccEEEEecCc
Confidence 356677788899998642 4789999864432345567789999887753333 223899999875
Q ss_pred CHHH--------------H---hhcCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHHh----c
Q 040267 350 TLYS--------------L---LHSNG---NTALD--WPSRLRIGLGAAR-------------------GLSWLH----H 384 (538)
Q Consensus 350 sL~~--------------~---l~~~~---~~~l~--~~~~~~i~~~ia~-------------------~L~yLH----~ 384 (538)
+|.. . +|... .+... |.+..++..++.. .+..|. .
T Consensus 136 ~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~ 215 (379)
T 3feg_A 136 PLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLES 215 (379)
T ss_dssp ECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHT
T ss_pred cCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhh
Confidence 4421 1 12111 11122 4555555544322 223332 2
Q ss_pred -CCCCCccccCCCCCCeeeCCC----CCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 385 -CCHPPCLHQNISSSVILVDED----FDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 385 -~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
.....++|+|+.+.||+++.+ +.+.+.||..+..- .=.|-+|..+.|..
T Consensus 216 ~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~-------~~~~Dla~~~~~~~ 269 (379)
T 3feg_A 216 TPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN-------YRGFDIGNHFCEWV 269 (379)
T ss_dssp SCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE-------EHHHHHHHHHHHTT
T ss_pred cCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC-------ChHHHHHHHHHHHH
Confidence 123468999999999999876 78999999886543 22455777777765
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.53 E-value=0.0038 Score=61.59 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=28.8
Q ss_pred CCCccccCCCCCCeeeCCC----CCeEEEeccCCcccC
Q 040267 387 HPPCLHQNISSSVILVDED----FDARIMDFGFSRLTN 420 (538)
Q Consensus 387 ~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~ 420 (538)
...++|+|+.+.||+++.+ ..+.|.||+.+..-.
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 3679999999999999875 678999999887653
No 434
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.45 E-value=0.0086 Score=60.63 Aligned_cols=83 Identities=14% Similarity=0.307 Sum_probs=36.6
Q ss_pred cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcc
Q 040267 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVR 154 (538)
Q Consensus 75 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~ 154 (538)
.|.+++.|+.+.+..+.. .+....+..++.|+.+.+. +.++..-...|.+|.+|+.++|..| ++-.-..+|.+|.+
T Consensus 260 aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 445555555555543332 2333333334555555553 2233222234455555555555432 33122334555555
Q ss_pred ccEEecc
Q 040267 155 LKQFSVA 161 (538)
Q Consensus 155 L~~l~l~ 161 (538)
|+.+.+.
T Consensus 336 L~~i~ip 342 (394)
T 4gt6_A 336 LERIAIP 342 (394)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 5555554
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.44 E-value=0.00074 Score=61.14 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=17.9
Q ss_pred CEEEEEcCCC-Cccc----cCcccccCCCCCCeEEccCCcCC
Q 040267 57 RILSLELEEM-NLSG----QVPESLQSCKSLQVLNLSTNNLF 93 (538)
Q Consensus 57 ~l~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~ 93 (538)
.++.|+|++| ++.. .+...+..-+.|+.|+|++|.+.
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 4555555553 4432 12333444455555555555554
No 436
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.37 E-value=0.0024 Score=64.17 Aligned_cols=45 Identities=16% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
..++|+|+.+.||+++++. +.|+||..+..-. =.|=+|.++.+..
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~g~-------~~~Dla~~~~~~~ 256 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGFNF-------LATDIANFFIETS 256 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEEEE-------HHHHHHHHHHGGG
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCCCc-------hHHHHHHHHHHHh
Confidence 4689999999999998654 8999998865431 2344666666654
No 437
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.33 E-value=0.0066 Score=61.04 Aligned_cols=119 Identities=12% Similarity=0.138 Sum_probs=66.6
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.+..+.+..+ +...-...+.++..|+.+.+..+ ++ .|....+..+.+|+.+.+..+ +...-...|..|++|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 3455555433 33333445666777777777654 44 455555555667777777543 43222345667777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
.+|.++..-+..|.++.+|+.+.+..+ ++..-..+|.++.+|.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 336 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALS 336 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCC
Confidence 766666333456677777777777544 3322233455444443
No 438
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.99 E-value=0.01 Score=60.04 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=75.2
Q ss_pred ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCc
Q 040267 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLV 153 (538)
Q Consensus 74 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~ 153 (538)
..+..+.+|+.+.+..+ ++ .|+...+..+.+|+.++|.++ ++-.-...|.+|++|+.+++..| ++..-..+|.+|.
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred ccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 45778999999999765 55 677776766899999999755 66334567999999999999877 6634456899999
Q ss_pred cccEEecccccCCCCCCcccccccccc
Q 040267 154 RLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 154 ~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+|+.+++..|- + .+...|.+.++|+
T Consensus 367 ~L~~i~lp~~~-~-~~~~~F~~c~~L~ 391 (394)
T 4fs7_A 367 NLKKVELPKRL-E-QYRYDFEDTTKFK 391 (394)
T ss_dssp TCCEEEEEGGG-G-GGGGGBCTTCEEE
T ss_pred CCCEEEECCCC-E-EhhheecCCCCCc
Confidence 99999997662 2 2234565555554
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.98 E-value=0.0096 Score=60.25 Aligned_cols=104 Identities=13% Similarity=0.243 Sum_probs=80.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.+.+.++-.+ .-...|.++++|+.+.+. +.++ .|+...+..+.+|+.++|..| ++-.-...|.+|.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 4677777654432 445678899999999996 5566 788887877999999999865 55344567999999999999
Q ss_pred cCccccCCCCccccCCccccEEecccccC
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l 165 (538)
..+ ++-.-..+|.+|.+|+.+++.+|..
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 765 6633457899999999999998754
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.74 E-value=0.024 Score=56.80 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=42.7
Q ss_pred cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcc
Q 040267 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVR 154 (538)
Q Consensus 75 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~ 154 (538)
.+..+.+|+.+.+..+ +. .++...+..+..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++.+
T Consensus 212 ~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred ccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 3444455555555433 22 233333333455555555443 33222334445555555555432 22122234455555
Q ss_pred ccEEecccccCCCCCCccccccc
Q 040267 155 LKQFSVAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 155 L~~l~l~~N~l~g~~p~~~~~~~ 177 (538)
|+.+.+.++.++..-...|.++.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccccccccceehhhhhcCCC
Confidence 55555555544433233444433
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.16 E-value=0.037 Score=54.73 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=28.8
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
..++|+|+.+.||++++++.+.|.||+.+....
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 569999999999999988889999998876543
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.08 E-value=0.042 Score=55.47 Aligned_cols=104 Identities=12% Similarity=0.181 Sum_probs=46.5
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCC-------------------CcCChhHhhcCCCCcEEEcccCCC
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLF-------------------GKIPTQLCKWFPYLVSLDLSNNDL 117 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~-------------------g~ip~~~~~~l~~L~~L~Ls~N~l 117 (538)
.++.+.+... ++..-...+..+..|+.+.+..+... ..++...+..+.+|+.+.+.++ +
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i 308 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-V 308 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-C
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-c
Confidence 3555555432 22222334555666666666554332 0122222223455555555433 3
Q ss_pred CCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccc
Q 040267 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163 (538)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N 163 (538)
...-...|.+|++|+.++|..+ ++-.-..+|.+|.+|+.+++..|
T Consensus 309 ~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 309 KFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3222334555555555555432 33222344555555555555444
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.00 E-value=0.0073 Score=54.58 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=63.2
Q ss_pred CcccccCCCCCCeEEccCC-cCCCc----CChhHhhcCCCCcEEEcccCCCCCC----CCccCcCCCCCcEeeecCcccc
Q 040267 72 VPESLQSCKSLQVLNLSTN-NLFGK----IPTQLCKWFPYLVSLDLSNNDLSGT----IPHELGNCVYLNTLYLSYNRLS 142 (538)
Q Consensus 72 ~p~~~~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 142 (538)
+...+.+-+.|++|+|++| .+... +-..+.. -..|+.|+|++|++... +-..+..-++|+.|+|++|.|+
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~-N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhh-CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3344566789999999986 76522 2222333 46799999999999732 2223445688999999999998
Q ss_pred CC----CCccccCCccccEEeccccc
Q 040267 143 GP----LPPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 143 g~----~p~~l~~l~~L~~l~l~~N~ 164 (538)
.. +-..+..-+.|+.|+|++|.
T Consensus 112 ~~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 112 PELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHHHHhhCCceeEEECCCCc
Confidence 42 22345555679999998763
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.80 E-value=0.026 Score=57.64 Aligned_cols=147 Identities=10% Similarity=0.138 Sum_probs=87.2
Q ss_pred CeEeecCCceEEEEEeCC--------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.+..|-...+|+....+ +..+++|+............+|.++++.+.-.++ ..++|+||++|.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~~~~I~efI~G~ 155 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFIDGE 155 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCCSE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcCCCEEEEEeCCc
Confidence 356677788899998753 5789999875432111224568887777743233 335899999985
Q ss_pred CHHH--------------Hh---hc----C-------CCCCCCHHHHHHHHHHH-------------------HHHHHHH
Q 040267 350 TLYS--------------LL---HS----N-------GNTALDWPSRLRIGLGA-------------------ARGLSWL 382 (538)
Q Consensus 350 sL~~--------------~l---~~----~-------~~~~l~~~~~~~i~~~i-------------------a~~L~yL 382 (538)
.|.. .+ |. . .....-|.+..++..++ ...+.+|
T Consensus 156 ~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e~~~L 235 (424)
T 3mes_A 156 PLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEEIDQL 235 (424)
T ss_dssp ECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHH
T ss_pred cCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHHHHHH
Confidence 4311 01 11 0 11111244444443322 2223333
Q ss_pred hc---------------------CCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 383 HH---------------------CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 383 H~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
.+ .....++|+|+.+.||+ +.++.+.+.||..+... .=.|-+|..+.|..
T Consensus 236 ~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~-------~~~~Dla~~~~~~~ 306 (424)
T 3mes_A 236 EELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN-------FAGADIANYFCEYI 306 (424)
T ss_dssp HHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEE-------EHHHHHHHHHHTTT
T ss_pred HHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcC-------ChHHHHHHHHHHHH
Confidence 21 11245899999999999 77889999999886543 22456777777765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.11 E-value=0.068 Score=54.00 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=37.3
Q ss_pred CCccccCCCCCCeeeCCC------CCeEEEeccCCcccCCCCCCccCcccHHHHHHHHHh
Q 040267 388 PPCLHQNISSSVILVDED------FDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELVT 441 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ellt 441 (538)
..++|+|+.+.||+++++ +.+.++||..+... .=.|-+|..+.|...
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~-------~~~~Dla~~~~e~~~ 296 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN-------YRGFDIGNHFCEWMY 296 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEE-------EHHHHHHHHHHHTTE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCcC-------ChHHHHHHHHHHHHh
Confidence 468999999999999876 78999999886543 335678888888764
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.06 E-value=0.26 Score=44.91 Aligned_cols=89 Identities=12% Similarity=0.119 Sum_probs=60.9
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc-----ccCC--
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-----LTNG-- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~-----~~~~-- 421 (538)
-+|.+.|...+ .++++.+++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.+...+ ..+. ...+
T Consensus 33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~~~~~~~~~pe~ 108 (229)
T 2yle_A 33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADDAGEPPPVAGKL 108 (229)
T ss_dssp EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------CC
T ss_pred ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-ccccccccCCCChhh
Confidence 37999998765 3799999999999999998776210001 1222346899999999987764 2221 1111
Q ss_pred ---CCCCccCcccHHHHHHHHHh
Q 040267 422 ---DASLQKDVHGFGVVLLELVT 441 (538)
Q Consensus 422 ---~~~~~~DV~S~Gvvl~ellt 441 (538)
..+.+.=|||+|+++|.-+-
T Consensus 109 ~~~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 109 GYSQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp SSSSSCHHHHHHHHHHHHHHHHT
T ss_pred ccccchHHHHHHHHHHHHHHHhh
Confidence 13677889999999999886
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.32 E-value=0.12 Score=52.17 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=33.3
Q ss_pred ccccCCCCCCeee------CCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 390 CLHQNISSSVILV------DEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 390 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
++|+|+.+.||++ +++..++++||..|..-.. .|=+|..+.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~-------~fDlan~f~ew~ 295 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR-------GFDIGNHFCEWM 295 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH-------HHHHHHHHHHTT
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc-------hHhHHHHHHHHh
Confidence 5799999999999 4567899999988765422 344677777765
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=92.00 E-value=0.18 Score=32.89 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=6.7
Q ss_pred hhhhhhhHHHHHHHHHHh
Q 040267 211 GAFGAAPSLMLVFGLWLW 228 (538)
Q Consensus 211 ~i~~~~~~l~l~~~~~~~ 228 (538)
.+.|++.++++++++.+|
T Consensus 17 ~vVGvll~vi~~l~~~~~ 34 (44)
T 2jwa_A 17 AVVGILLVVVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 333433333333333333
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.44 E-value=0.12 Score=33.92 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=9.1
Q ss_pred HHHhhhhhhhhhHHHHHHHH
Q 040267 206 AIIAAGAFGAAPSLMLVFGL 225 (538)
Q Consensus 206 ~ii~~~i~~~~~~l~l~~~~ 225 (538)
.+++.++++++.+++++++.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~ 31 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGI 31 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHHHHHH
Confidence 34444454444444444433
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.41 E-value=0.24 Score=32.33 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=12.5
Q ss_pred hhHHHHhhhhhhhhhHHHHHHHHHHh
Q 040267 203 KLAAIIAAGAFGAAPSLMLVFGLWLW 228 (538)
Q Consensus 203 ~~~~ii~~~i~~~~~~l~l~~~~~~~ 228 (538)
....+++.++.+++.+++++++.+++
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~ 33 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVY 33 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHH
Confidence 33445555555555554444443333
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.56 E-value=0.46 Score=43.14 Aligned_cols=99 Identities=9% Similarity=0.040 Sum_probs=71.7
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
++..|-...+...+-.-. .++...+++++..|+....+++. =+|--+.|+|+++|.++.+++.-.|+...+.
T Consensus 59 v~~~y~~~~~~~~f~~ik---~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 59 FQIHYDINDNHTPFDNIK---SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp EEEEECCCTTSEEGGGGG---GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTTBS
T ss_pred EEEEEEcCcccCCHHHHH---hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccCCC
Confidence 445554443333333222 37889999999999998876664 2678899999999999999999999876665
Q ss_pred CC-CCCccCcccHHHHHHHHHhCCCCCC
Q 040267 421 GD-ASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 421 ~~-~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
+. .+...=.-.+=+++..+++++..|+
T Consensus 131 P~~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 131 PLPVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 44 2333334478888999999998886
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.58 E-value=0.72 Score=42.01 Aligned_cols=81 Identities=12% Similarity=0.179 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCc-ccHHHHHHHH
Q 040267 362 ALDWPSRLRIGLGAARGLS-WLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDV-HGFGVVLLEL 439 (538)
Q Consensus 362 ~l~~~~~~~i~~~ia~~L~-yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV-~S~Gvvl~el 439 (538)
.++...+++++..++.... +++. -+|--+.|+||++|.++.+++.-.|+-..+.+.-....|. -.+=+++..+
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP~e~~ee~fl~qyKali~al 155 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESLPPDEWDDERLLREVKATVLAL 155 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTBSSCSCCHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 3788999999999988666 5554 3677889999999999999999999877665432223333 4677888888
Q ss_pred HhCCCCCC
Q 040267 440 VTGQKPFE 447 (538)
Q Consensus 440 ltg~~p~~ 447 (538)
+.++..|+
T Consensus 156 l~~K~~Fe 163 (219)
T 4ano_A 156 TEGEYRFD 163 (219)
T ss_dssp TTCSSCHH
T ss_pred HcCCCCHH
Confidence 88887775
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=42.89 E-value=2.6 Score=43.29 Aligned_cols=49 Identities=4% Similarity=-0.163 Sum_probs=10.2
Q ss_pred CeEeecCCceEEEEEeCC-CCEEEE------EEccccc---ccHHHHHHHHHHHhcCCCCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD-GSMLAI------KRLSACK---LGEKQFLLEMKQVGLLKHPNL 337 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~~~vav------K~~~~~~---~~~~~~~~E~~~l~~l~H~ni 337 (538)
+.+| ||.||+|.+.. ..+||| |..+... .....|.+|..++...+|||+
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~ni 206 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKY 206 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------
T ss_pred ccCC---chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccccccccc
Confidence 4565 99999999754 468888 7665422 223458889999999999998
No 454
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=39.56 E-value=23 Score=25.04 Aligned_cols=16 Identities=19% Similarity=-0.058 Sum_probs=6.2
Q ss_pred hhhhhhHHHHHHHHHH
Q 040267 212 AFGAAPSLMLVFGLWL 227 (538)
Q Consensus 212 i~~~~~~l~l~~~~~~ 227 (538)
+++++..++++...++
T Consensus 14 lGg~~~lll~~glcI~ 29 (70)
T 2klu_A 14 LGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHH
Confidence 3333333334443334
No 455
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.91 E-value=49 Score=22.49 Aligned_cols=23 Identities=17% Similarity=0.296 Sum_probs=11.4
Q ss_pred hHHHHhhhhhhhhhHHHHHHHHH
Q 040267 204 LAAIIAAGAFGAAPSLMLVFGLW 226 (538)
Q Consensus 204 ~~~ii~~~i~~~~~~l~l~~~~~ 226 (538)
...+++++++|.++..+++++++
T Consensus 12 ~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 12 IWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555444444443
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=37.85 E-value=38 Score=22.99 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=11.0
Q ss_pred HHHHhhhhhhhhhHHHHHHHHH
Q 040267 205 AAIIAAGAFGAAPSLMLVFGLW 226 (538)
Q Consensus 205 ~~ii~~~i~~~~~~l~l~~~~~ 226 (538)
..+++++++|.++..+++++++
T Consensus 10 WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555444444443
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.63 E-value=92 Score=30.05 Aligned_cols=77 Identities=14% Similarity=0.038 Sum_probs=41.0
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHH--HHHHHHHhcCC-CCCccc-cCCCCCCeeeCCCC-CeEEEecc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGA--ARGLSWLHHCC-HPPCLH-QNISSSVILVDEDF-DARIMDFG 414 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i--a~~L~yLH~~~-~~~ivH-~Dlkp~NIll~~~~-~~kl~Dfg 414 (538)
+++|||.+|..|.+.-+..-...+.. +...++ +-++.++.... ..+.+. .--.+.||+++++. .+.++|.+
T Consensus 158 ~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 158 ILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp EEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred eehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 48999998755543221100001221 222222 23455554432 223322 23578899998654 48999999
Q ss_pred CCcccC
Q 040267 415 FSRLTN 420 (538)
Q Consensus 415 ~a~~~~ 420 (538)
.+....
T Consensus 234 ~af~~~ 239 (342)
T 1cja_A 234 IIPLDA 239 (342)
T ss_dssp CCCCCS
T ss_pred ccccCC
Confidence 986643
No 458
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=29.76 E-value=30 Score=21.77 Aligned_cols=12 Identities=33% Similarity=0.396 Sum_probs=4.8
Q ss_pred HHHhhhhhhhhh
Q 040267 206 AIIAAGAFGAAP 217 (538)
Q Consensus 206 ~ii~~~i~~~~~ 217 (538)
.++.+.+.+.+.
T Consensus 14 ~I~~~vv~Gv~l 25 (41)
T 2k9y_A 14 AVIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEEeehhHHHHH
Confidence 344444444333
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.88 E-value=1.2e+02 Score=23.19 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=5.7
Q ss_pred cCcCCCCCcEeee
Q 040267 124 ELGNCVYLNTLYL 136 (538)
Q Consensus 124 ~~~~l~~L~~L~l 136 (538)
.|.+|.+|+.+.+
T Consensus 38 aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 38 MFSGCTALEKLIL 50 (100)
T ss_dssp SSTTCTTCCCEEE
T ss_pred HHhccCCccEEEE
Confidence 3444444444444
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=22.50 E-value=93 Score=19.89 Aligned_cols=22 Identities=14% Similarity=0.095 Sum_probs=10.3
Q ss_pred hHHHHhhhhhhhhhHHHHHHHH
Q 040267 204 LAAIIAAGAFGAAPSLMLVFGL 225 (538)
Q Consensus 204 ~~~ii~~~i~~~~~~l~l~~~~ 225 (538)
...++.+++.|.+...++++++
T Consensus 10 ~wiIi~s~l~GLllL~li~~~L 31 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTILVLAM 31 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555544444444444
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.75 E-value=1.3e+02 Score=23.00 Aligned_cols=46 Identities=9% Similarity=0.060 Sum_probs=31.5
Q ss_pred CCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccc
Q 040267 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163 (538)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N 163 (538)
++..-...|.+|++|+.+.|..+ ++..-...|.+|.+|+.+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34333456778888888888764 44233567888999998888654
Done!