Your job contains 1 sequence.
>040274
EISYELDTKVKKYLRGEDFKRQKLKGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSG
RYMAVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPN
GHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSH
NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETS
KQRREKEVHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVW
KNKTKGRNKPSKKAKKKQELIAHARRPFLDQQLKEEQSLSKKKQKLFEEVELPASLRRF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040274
(359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075750 - symbol:AT3G10530 "AT3G10530" species... 1015 2.6e-117 2
POMBASE|SPAC959.03c - symbol:SPAC959.03c "U3 snoRNP-assoc... 433 9.6e-44 2
ASPGD|ASPL0000002969 - symbol:AN6265 species:162425 "Emer... 416 4.6e-42 2
CGD|CAL0005357 - symbol:orf19.4835 species:5476 "Candida ... 445 5.2e-42 1
UNIPROTKB|Q5APD0 - symbol:CaO19.12298 "Putative uncharact... 445 5.2e-42 1
MGI|MGI:1931871 - symbol:Wdr46 "WD repeat domain 46" spec... 415 1.6e-40 2
UNIPROTKB|G4NCA1 - symbol:MGG_01100 "Small nucleolar ribo... 412 1.6e-38 1
UNIPROTKB|O15213 - symbol:WDR46 "WD repeat-containing pro... 403 2.7e-37 1
FB|FBgn0030000 - symbol:CG2260 species:7227 "Drosophila m... 398 1.0e-36 1
SGD|S000000884 - symbol:UTP7 "Nucleolar protein" species:... 219 6.0e-34 3
WB|WBGene00009211 - symbol:wdr-46 species:6239 "Caenorhab... 368 1.8e-33 1
DICTYBASE|DDB_G0280489 - symbol:wdr46 "BING4 C-terminal d... 308 5.1e-30 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 149 4.0e-09 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 158 1.9e-08 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 142 4.4e-08 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 149 1.9e-07 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 149 2.2e-07 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 149 2.2e-07 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 149 2.2e-07 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 149 2.3e-07 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 149 2.3e-07 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 146 4.1e-07 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 122 4.5e-07 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 147 6.7e-07 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 144 6.9e-07 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 143 9.0e-07 1
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 142 9.1e-07 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 139 1.4e-06 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 140 1.8e-06 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 137 1.9e-06 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 140 1.9e-06 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 142 2.2e-06 1
UNIPROTKB|Q8IU52 - symbol:TUWD12 "POC1 centriolar protein... 135 2.8e-06 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 136 2.9e-06 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 136 2.9e-06 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 136 3.0e-06 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 137 3.0e-06 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 133 4.1e-06 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 135 4.3e-06 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 137 4.4e-06 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 135 5.1e-06 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 138 5.2e-06 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 133 7.2e-06 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 132 8.6e-06 1
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 134 8.9e-06 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 131 9.0e-06 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 131 1.1e-05 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 131 1.1e-05 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 131 1.1e-05 1
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 134 1.2e-05 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 124 1.3e-05 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 134 1.3e-05 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 134 1.4e-05 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 133 1.6e-05 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 131 1.7e-05 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 132 1.8e-05 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 130 1.8e-05 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 129 2.2e-05 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 126 2.2e-05 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 131 2.9e-05 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 131 2.9e-05 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 131 2.9e-05 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 131 2.9e-05 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 131 2.9e-05 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 130 3.6e-05 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 131 3.7e-05 1
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 126 3.7e-05 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 126 4.1e-05 1
UNIPROTKB|F1RF38 - symbol:KATNB1 "Uncharacterized protein... 126 5.8e-05 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 126 6.4e-05 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 130 7.2e-05 1
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 123 8.4e-05 1
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 124 9.2e-05 1
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 124 9.2e-05 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 124 9.2e-05 1
MGI|MGI:106247 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA proce... 124 9.2e-05 1
RGD|708496 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA processin... 124 9.2e-05 1
UNIPROTKB|Q9JMJ4 - symbol:Prpf19 "Pre-mRNA-processing fac... 124 9.2e-05 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 124 9.2e-05 1
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 124 9.4e-05 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 125 0.00011 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 120 0.00012 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 122 0.00014 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 114 0.00015 2
UNIPROTKB|H3BT67 - symbol:KATNB1 "Katanin p80 WD40 repeat... 98 0.00019 1
UNIPROTKB|H3BTV8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 98 0.00019 1
FB|FBgn0261119 - symbol:Prp19 "Prp19" species:7227 "Droso... 121 0.00020 1
UNIPROTKB|Q9AV81 - symbol:PUB72 "U-box domain-containing ... 121 0.00021 1
POMBASE|SPBC1718.01 - symbol:pop1 "cullin 1 adaptor prote... 123 0.00022 1
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 119 0.00023 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 120 0.00024 1
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 119 0.00024 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 119 0.00024 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 119 0.00025 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 118 0.00025 2
UNIPROTKB|F1RKG5 - symbol:WSB2 "Uncharacterized protein" ... 118 0.00030 1
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 118 0.00030 1
UNIPROTKB|Q0V8J1 - symbol:WSB2 "WD repeat and SOCS box-co... 118 0.00031 1
UNIPROTKB|F1P6A3 - symbol:WSB2 "Uncharacterized protein" ... 118 0.00031 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 120 0.00036 1
WARNING: Descriptions of 26 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2075750 [details] [associations]
symbol:AT3G10530 "AT3G10530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AC013428
GO:GO:0080008 KO:K14768 InterPro:IPR012952 Pfam:PF08149
SMART:SM01033 EMBL:BT004313 EMBL:BT006135 IPI:IPI00533564
RefSeq:NP_187664.2 UniGene:At.39914 ProteinModelPortal:Q9LPP3
SMR:Q9LPP3 IntAct:Q9LPP3 STRING:Q9LPP3 PRIDE:Q9LPP3
EnsemblPlants:AT3G10530.1 GeneID:820218 KEGG:ath:AT3G10530
TAIR:At3g10530 InParanoid:Q9LPP3 OMA:GHSMGWS PhylomeDB:Q9LPP3
ProtClustDB:CLSN2690838 ArrayExpress:Q9LPP3 Genevestigator:Q9LPP3
Uniprot:Q9LPP3
Length = 536
Score = 1015 (362.4 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 199/294 (67%), Positives = 230/294 (78%)
Query: 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG 128
RTD+M VNP+N VV LGHSGGTVTMWKPT+ A L++M H GPVS++AFHPNGHLMAT+G
Sbjct: 241 RTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSG 300
Query: 129 KECKIKIWDLRKYEVLQTLTG-HAKTLDFSQKGLLAVGTGSFAQILGDFSG--SHNYSRY 185
KE KIKIWDLRK+E +QT+ HAKTL FSQKGLLA GTGSF QILGD SG SHNY+RY
Sbjct: 301 KERKIKIWDLRKFEEVQTIHSFHAKTLSFSQKGLLAAGTGSFVQILGDSSGGSSHNYTRY 360
Query: 186 MGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRRE 245
M +SMVKGYQI KV FRPYEDV+GIGHSMGWS IL+P S EPNFDSWVANPFETSKQRRE
Sbjct: 361 MNHSMVKGYQIEKVMFRPYEDVIGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRRE 420
Query: 246 KEVHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVWKNKTK 305
KEVHSLLDKL ETIML+PSKIG +R +++KEKP++ EAE E A+EA K KNKTK
Sbjct: 421 KEVHSLLDKLPPETIMLDPSKIGAMRPSRRKEKPSRGEIEAEKEVAIEAAKSTELKNKTK 480
Query: 306 GRNKPSKKAKKKQELIAHARRPFLDXXXXXXXXXXXXXXXXXXXVELPASLRRF 359
GRNKPSK+ KKK+E++ +A+R F + ELP SL+RF
Sbjct: 481 GRNKPSKRTKKKKEMVENAKRTFPEQEHNTAIKKRRIVEDAAA--ELPTSLKRF 532
Score = 161 (61.7 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 39/72 (54%), Positives = 46/72 (63%)
Query: 1 EISYELDTKVKKYLRGED-----FKRQKLKGQLPLREELYGKSAKAAAKVEKNLVHILWI 55
E EL+TKVKKYLRGE K +KLK QL RE+LYGKSAKAAAK+EK W+
Sbjct: 21 ESDVELETKVKKYLRGEGANLETLKDKKLKTQLASREKLYGKSAKAAAKIEK------WL 74
Query: 56 LPSSGRYMAVAG 67
LP+ Y+ G
Sbjct: 75 LPAEAGYLETEG 86
Score = 48 (22.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 61 RYM---AVAGRRTDLMRVNPFNGVVSLGHSGG 89
RYM V G + + + P+ V+ +GHS G
Sbjct: 359 RYMNHSMVKGYQIEKVMFRPYEDVIGIGHSMG 390
Score = 46 (21.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 106 LYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-TGHAKT 153
L +GPV+ L F N L+A+ ++ D+ ++ ++ TG +T
Sbjct: 194 LKERGPVARLRFLKNHFLLASVNMSGQLHYQDVTHGGMVASIRTGKGRT 242
Score = 39 (18.8 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 58 SSGRYMAVAGRRTDLMRVNPFN 79
+SGR+M GR+ L ++ N
Sbjct: 127 ASGRHMLAGGRKGHLALLDMMN 148
>POMBASE|SPAC959.03c [details] [associations]
symbol:SPAC959.03c "U3 snoRNP-associated protein Utp7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC959.03c EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 RefSeq:NP_594170.1
ProteinModelPortal:Q9P4X3 STRING:Q9P4X3 EnsemblFungi:SPAC959.03c.1
GeneID:2543484 KEGG:spo:SPAC959.03c HOGENOM:HOG000165037 KO:K14768
OMA:TTPLVKM OrthoDB:EOG4DRDMP NextBio:20804496 InterPro:IPR012952
Pfam:PF08149 SMART:SM01033 Uniprot:Q9P4X3
Length = 520
Score = 433 (157.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 99/248 (39%), Positives = 143/248 (57%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
++ NP N V +GH+ G VT+W P+++ L+KML H+GPV LA + +G M T G +
Sbjct: 228 VLHQNPHNAVEHVGHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADS 287
Query: 132 KIKIWDLRKYEVLQTL--TGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNS 189
+K+WDLR Y+ L + A+ L S +GLLAVG G A I D + YM N
Sbjct: 288 LLKVWDLRTYKELHSYYTPTPAQRLTLSDRGLLAVGWGPHATIWKDALRTKQNFPYM-NH 346
Query: 190 MVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREKEVH 249
++ + + + PYED+LGIGH+ G+ I+VP S EPN+DS+ +PF + KQR+E EV
Sbjct: 347 LLPSSSVVDLHYCPYEDILGIGHAKGFESIIVPGSGEPNYDSYENDPFASRKQRQETEVR 406
Query: 250 SLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVWKNKTKGRNK 309
LL+KL E I LN IG V A P+ + EAE E E + +V K K +G+N
Sbjct: 407 QLLEKLRPEMISLNADFIGNVDRAA----PSLRKAEAEEEKPPE--EKWVPKAKARGKNS 460
Query: 310 PSKKAKKK 317
++ +K
Sbjct: 461 ALRRYLRK 468
Score = 45 (20.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 5 ELDTKVKKYLRGEDFKRQKLKGQLPLREELYGKSAKAAAKVEKNL 49
+++ KKY RG +K+K + LR + K + VE +L
Sbjct: 10 DVNASTKKYSRGRKLNPKKIKDK-KLRSNIQ-KIEERIENVESSL 52
>ASPGD|ASPL0000002969 [details] [associations]
symbol:AN6265 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003676 EMBL:AACD01000107
EMBL:BN001301 GO:GO:0030686 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 HOGENOM:HOG000165037 KO:K14768
OrthoDB:EOG4DRDMP InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 OMA:YWEEETT RefSeq:XP_663869.1
ProteinModelPortal:Q5AZL5 STRING:Q5AZL5
EnsemblFungi:CADANIAT00006725 GeneID:2871161 KEGG:ani:AN6265.2
Uniprot:Q5AZL5
Length = 535
Score = 416 (151.5 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 93/279 (33%), Positives = 153/279 (54%)
Query: 51 HILWILPSSGRYMAV----AGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML 106
H+ + S+G+ +A G T L + NP+N ++ +GH GTVT+W P T L+K L
Sbjct: 216 HLKYTDTSTGQLVAEIPTKVGAPTSLAQ-NPWNAIMHVGHQNGTVTLWSPNTQTPLVKAL 274
Query: 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--AKTLDFSQKGLLAV 164
H+GPV ++A G M +TG++ K+++WD+R Y + + + H + S +GL AV
Sbjct: 275 VHRGPVRSMAIDRQGRYMVSTGQDLKMQVWDIRMYREVHSYSCHQPGAAVSISDRGLTAV 334
Query: 165 GTGSFAQIL-GDF-SGSHNYSRYMGNSMV---KGYQIGKVSFRPYEDVLGIGHSMGWSGI 219
G G+ + G F + + + + M G +I + + PYED+LG+ H G++ I
Sbjct: 335 GWGTQVSVWRGLFDAATADVGKVQSPYMSWGGDGQRIENLRWAPYEDILGVAHDKGFASI 394
Query: 220 LVPRSSEPNFDSWVANPFETSKQRREKEVHSLLDKLLLETIMLNPSKIGTVREAKKKEKP 279
+VP + EPNFD+ NP+E KQR+E EV +LL+KL I L+P+ +G V K
Sbjct: 395 IVPGAGEPNFDALEVNPYENPKQRQEAEVRALLNKLQPGMISLDPNFVGKVDTVSDKRSR 454
Query: 280 TKQGREAEMEAAVEAIKGFVWKNKTKGRNKPSKKAKKKQ 318
++ + E +E +K N+ +GRN +K +K+
Sbjct: 455 EEKDLDRRPEDTIEKLK-----NRGRGRNSALRKYLRKK 488
Score = 46 (21.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 18/55 (32%), Positives = 23/55 (41%)
Query: 11 KKYLRGE-----DFKRQKLKGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSG 60
KKY RG+ + +KL+ L EE Y +A A E L H L G
Sbjct: 27 KKYGRGKAVHTHSVRDKKLRSNLQAVEEKYKNAALRAKDAEILLEHEAGFLEPEG 81
>CGD|CAL0005357 [details] [associations]
symbol:orf19.4835 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005357 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AACQ01000001 EMBL:AACQ01000002 KO:K14768 InterPro:IPR012952
Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990 RefSeq:XP_723331.1
RefSeq:XP_723521.1 ProteinModelPortal:Q5APD0 STRING:Q5APD0
GeneID:3634818 GeneID:3634948 KEGG:cal:CaO19.12298
KEGG:cal:CaO19.4835 Uniprot:Q5APD0
Length = 527
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 100/258 (38%), Positives = 144/258 (55%)
Query: 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK 129
T M+ NP+N V LGH GTV+MW P L+K+ +GP+ LA G MA
Sbjct: 229 TQAMKHNPWNAVTCLGHGNGTVSMWAPNMPEPLVKLQVARGPIRDLAIDREGKYMAVAAA 288
Query: 130 ECKIKIWDLRKYEVLQTLTGH--AKTLDFSQKGLLAVGTGSFAQILGDF-SGSHNYSRYM 186
+ +KIWD+RK++ + A +LD S GLL+VG G I D G H YM
Sbjct: 289 DKTLKIWDIRKFKEVDNYYSQTPASSLDISDTGLLSVGWGPHVTIWKDILKGKHQSEPYM 348
Query: 187 GNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREK 246
N ++ G +I K F P+ED+LG+GH G++ I+VP S E N+D+ NP+E+ KQR+++
Sbjct: 349 -NHLIPGSKIEKAKFVPFEDILGVGHEEGFNSIIVPGSGEANYDALELNPYESVKQRQQQ 407
Query: 247 EVHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVW-KNKTK 305
EV SLLDKL +TI L+P+ IGTV + + K G E+ + K + K + K
Sbjct: 408 EVRSLLDKLPADTIALDPNVIGTV-DKRASTVRLKPGEITELADKTQQSKDKMEIKAEVK 466
Query: 306 GRNKPSKK--AKKKQELI 321
G+N ++ KK Q +I
Sbjct: 467 GKNSALRRHMRKKTQNVI 484
>UNIPROTKB|Q5APD0 [details] [associations]
symbol:CaO19.12298 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005357 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AACQ01000001 EMBL:AACQ01000002 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990
RefSeq:XP_723331.1 RefSeq:XP_723521.1 ProteinModelPortal:Q5APD0
STRING:Q5APD0 GeneID:3634818 GeneID:3634948 KEGG:cal:CaO19.12298
KEGG:cal:CaO19.4835 Uniprot:Q5APD0
Length = 527
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 100/258 (38%), Positives = 144/258 (55%)
Query: 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK 129
T M+ NP+N V LGH GTV+MW P L+K+ +GP+ LA G MA
Sbjct: 229 TQAMKHNPWNAVTCLGHGNGTVSMWAPNMPEPLVKLQVARGPIRDLAIDREGKYMAVAAA 288
Query: 130 ECKIKIWDLRKYEVLQTLTGH--AKTLDFSQKGLLAVGTGSFAQILGDF-SGSHNYSRYM 186
+ +KIWD+RK++ + A +LD S GLL+VG G I D G H YM
Sbjct: 289 DKTLKIWDIRKFKEVDNYYSQTPASSLDISDTGLLSVGWGPHVTIWKDILKGKHQSEPYM 348
Query: 187 GNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREK 246
N ++ G +I K F P+ED+LG+GH G++ I+VP S E N+D+ NP+E+ KQR+++
Sbjct: 349 -NHLIPGSKIEKAKFVPFEDILGVGHEEGFNSIIVPGSGEANYDALELNPYESVKQRQQQ 407
Query: 247 EVHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVW-KNKTK 305
EV SLLDKL +TI L+P+ IGTV + + K G E+ + K + K + K
Sbjct: 408 EVRSLLDKLPADTIALDPNVIGTV-DKRASTVRLKPGEITELADKTQQSKDKMEIKAEVK 466
Query: 306 GRNKPSKK--AKKKQELI 321
G+N ++ KK Q +I
Sbjct: 467 GKNSALRRHMRKKTQNVI 484
>MGI|MGI:1931871 [details] [associations]
symbol:Wdr46 "WD repeat domain 46" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1931871 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AF110520 EMBL:AF100956 HOGENOM:HOG000165037
KO:K14768 InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 GeneTree:ENSGT00390000007075 OMA:YWEEETT CTD:9277
HOVERGEN:HBG050687 OrthoDB:EOG49W2F6 EMBL:BC046977 IPI:IPI00129141
RefSeq:NP_065628.1 UniGene:Mm.2437 ProteinModelPortal:Q9Z0H1
SMR:Q9Z0H1 STRING:Q9Z0H1 PhosphoSite:Q9Z0H1 PaxDb:Q9Z0H1
PRIDE:Q9Z0H1 Ensembl:ENSMUST00000025170 GeneID:57315 KEGG:mmu:57315
UCSC:uc008cai.1 InParanoid:Q9Z0H1 ChiTaRS:WDR46 NextBio:313667
Bgee:Q9Z0H1 CleanEx:MM_WDR46 Genevestigator:Q9Z0H1
GermOnline:ENSMUSG00000024312 Uniprot:Q9Z0H1
Length = 622
Score = 415 (151.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 105/271 (38%), Positives = 156/271 (57%)
Query: 66 AGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMA 125
AGR + +M NP+N V+ LGHS GTV++W P L K+L H+G V A+A G MA
Sbjct: 316 AGRLS-VMAQNPYNAVIHLGHSNGTVSLWSPAVKEPLAKILCHRGGVRAVAVDSTGTYMA 374
Query: 126 TTGKECKIKIWDLR-KYEVL--QTLTGHAKTLDFSQKGLLAVGTGSFAQIL---GDFSGS 179
T+G + ++KI+DLR ++ L +TL A L FSQ+GLL G G I G S
Sbjct: 375 TSGLDHQLKIFDLRGTFQPLSSRTLPQGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPP 434
Query: 180 HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFET 239
Y+ + + G+ G + F P+EDVLG+GHS G++ +LVP ++EPNFD NP+ +
Sbjct: 435 SLEQPYLTHRL-SGHVHG-LQFCPFEDVLGVGHSGGFTSMLVPGAAEPNFDGLENNPYRS 492
Query: 240 SKQRREKEVHSLLDKLLLETIMLNPSKIGTVR----EAKKKEKPTKQGREAEMEAAVEAI 295
KQR+E EV +LL+K+ E I LNP + V E +KKE+ + G + + +AA +
Sbjct: 493 RKQRQEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQKKERIERLGYDPDAKAAFQP- 551
Query: 296 KGFVWKNKTKGRNKPSKKAKKKQELIAHARR 326
K K KGR+ + K+K++++ R
Sbjct: 552 -----KAKQKGRSSTASLVKRKKKVMDQEHR 577
Score = 37 (18.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 59 SGRYMAVAGRR 69
+GR++A+ GRR
Sbjct: 205 TGRHLALGGRR 215
>UNIPROTKB|G4NCA1 [details] [associations]
symbol:MGG_01100 "Small nucleolar ribonucleoprotein complex
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001235 GO:GO:0003676 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 RefSeq:XP_003717834.1
ProteinModelPortal:G4NCA1 EnsemblFungi:MGG_01100T0 GeneID:2675171
KEGG:mgr:MGG_01100 Uniprot:G4NCA1
Length = 556
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 98/271 (36%), Positives = 158/271 (58%)
Query: 58 SSGRYMA-VAGRR--TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSA 114
S+G+ ++ VA + T + NP+N ++ +GH+ GTVT+W P +S L+K+L H+GPV +
Sbjct: 245 STGQIVSEVASKLGPTQSLVQNPWNAILHMGHNNGTVTLWSPNSSDPLVKLLAHKGPVRS 304
Query: 115 LAFHPNGHLMATTGKECKIKIWDLRKY-EVLQTLTGH-AKTLDFSQKGLLAVGTGSFAQI 172
LA G M +TG++ ++ +WD+R + EV T A ++ S GL AVG G+ I
Sbjct: 305 LAIDREGRYMVSTGQDSRMAVWDIRMFKEVNNYFTRTPASSVAISDSGLTAVGWGTHTTI 364
Query: 173 L-GDFSGSHNYSRYMGNSMV----KGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEP 227
G F + + + + +G ++ +V + P+EDVLGIGH G+S ILVP + E
Sbjct: 365 WKGLFDKNAATQEKVQSPYLTWGGEGRRVERVRWCPFEDVLGIGHDGGFSSILVPGAGEA 424
Query: 228 NFDSWVANPFETSKQRREKEVHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAE 287
NFD+ NP+ET KQR+E EV SLL+KL E I L+P+ +G + + ++ ++ +A
Sbjct: 425 NFDALEINPYETVKQRQESEVKSLLNKLQPEMIALDPNFVGNLDLRSEAQRRAERDLDAP 484
Query: 288 MEAAVEAIKGFVWKNKTKGRNKPSKKAKKKQ 318
E + I+ N+ +G+N KK +KQ
Sbjct: 485 PEDIADEIR-----NRMRGKNSALKKYLRKQ 510
>UNIPROTKB|O15213 [details] [associations]
symbol:WDR46 "WD repeat-containing protein 46" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AL031228 EMBL:AL844527 EMBL:AL662827
EMBL:AL662820 EMBL:Z97184 EMBL:BX000343 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990
OMA:YWEEETT EMBL:AF447870 EMBL:BC000388 IPI:IPI00023126
RefSeq:NP_001157739.1 RefSeq:NP_005443.3 UniGene:Hs.520063
UniGene:Hs.671763 ProteinModelPortal:O15213 SMR:O15213
STRING:O15213 PhosphoSite:O15213 PaxDb:O15213 PRIDE:O15213
DNASU:9277 Ensembl:ENST00000374617 Ensembl:ENST00000383208
Ensembl:ENST00000432609 Ensembl:ENST00000432933
Ensembl:ENST00000457382 GeneID:9277 KEGG:hsa:9277 UCSC:uc003ods.3
CTD:9277 GeneCards:GC06M033246 H-InvDB:HIX0058254 HGNC:HGNC:13923
HPA:HPA043004 MIM:611440 neXtProt:NX_O15213 PharmGKB:PA25924
HOVERGEN:HBG050687 InParanoid:O15213 OrthoDB:EOG49W2F6
PhylomeDB:O15213 GenomeRNAi:9277 NextBio:34769 ArrayExpress:O15213
Bgee:O15213 CleanEx:HS_WDR46 Genevestigator:O15213 Uniprot:O15213
Length = 610
Score = 403 (146.9 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 106/273 (38%), Positives = 153/273 (56%)
Query: 64 AVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL 123
A AGR D+M NP+N V+ LGHS GTV++W P L K+L H+G V A+A G
Sbjct: 315 ARAGR-LDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTY 373
Query: 124 MATTGKECKIKIWDLR-KYEVLQTLT-GH-AKTLDFSQKGLLAVGTGSFAQIL---GDFS 177
MAT+G + ++KI+DLR Y+ L T T H A L FSQ+GLL G G I G S
Sbjct: 374 MATSGLDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAGQGKAS 433
Query: 178 GSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPF 237
Y+ + + G G + F P+EDVLG+GH+ G + +LVP + EPNFD +NP+
Sbjct: 434 PPSLEQPYLTHRL-SGPVHG-LQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPY 491
Query: 238 ETSKQRREKEVHSLLDKLLLETIMLNPSKIGTVR----EAKKKEKPTKQGREAEMEAAVE 293
+ KQR+E EV +LL+K+ E I L+P + V E KKE+ + G + + +A +
Sbjct: 492 RSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQGKKEQIERLGYDPQAKAPFQ 551
Query: 294 AIKGFVWKNKTKGRNKPSKKAKKKQELIAHARR 326
K K KGR+ + K+K++++ R
Sbjct: 552 P------KPKQKGRSSTASLVKRKRKVMDEEHR 578
>FB|FBgn0030000 [details] [associations]
symbol:CG2260 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
KO:K14768 InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 GeneTree:ENSGT00390000007075 OMA:YWEEETT
EMBL:AY095054 RefSeq:NP_572441.1 UniGene:Dm.12847 SMR:Q9W3K3
IntAct:Q9W3K3 MINT:MINT-873984 STRING:Q9W3K3
EnsemblMetazoa:FBtr0071194 GeneID:31732 KEGG:dme:Dmel_CG2260
UCSC:CG2260-RA FlyBase:FBgn0030000 InParanoid:Q9W3K3
OrthoDB:EOG4PZGP0 GenomeRNAi:31732 NextBio:775065 Uniprot:Q9W3K3
Length = 609
Score = 398 (145.2 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 99/265 (37%), Positives = 147/265 (55%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
++R NP NGV+ +G G V+MW P L K+L H +SALA P G + T G +
Sbjct: 300 MLRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCHSTAMSALAVEPKGQYLVTAGLDR 359
Query: 132 KIKIWDLRKYEVLQTLTGH-----AKTLDFSQKGLLAVGTGSFAQILGDF---SGSHNYS 183
+K+WD+R + LT A LD SQ+G+LA+ G++ + D GS + +
Sbjct: 360 AVKVWDIRMLVHDKPLTHFQLRLPANELDVSQRGMLALSQGTYLETYSDLLSGGGSGDGT 419
Query: 184 R--YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSK 241
R Y+ + G + F PYEDVLG+ + G+ +LVP S EPNFD+ NP+ETSK
Sbjct: 420 RLPYI-RQRCDAFVHG-LRFCPYEDVLGVSTAKGFQSLLVPGSGEPNFDAMEDNPYETSK 477
Query: 242 QRREKEVHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVWK 301
QRRE EVH+LL+K+ E I L+P +I V +EK + + ++A +K +
Sbjct: 478 QRREHEVHALLEKIPPELITLDPQEITGVDAPTLQEKIDAKRKLFHLKAPRINMKS---R 534
Query: 302 NKTKGRNKPSKKAKKKQELIAHARR 326
+K KGR +K A+ KQ ++ A+R
Sbjct: 535 HKMKGRGGTAKAARNKQ-IVKDAKR 558
>SGD|S000000884 [details] [associations]
symbol:UTP7 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000884 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006939 EMBL:U18839
GO:GO:0030686 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472
GO:GO:0000480 HOGENOM:HOG000165037 KO:K14768 OrthoDB:EOG4DRDMP
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 PIR:S50585
RefSeq:NP_011005.1 ProteinModelPortal:P40055 SMR:P40055
DIP:DIP-5398N IntAct:P40055 MINT:MINT-513710 STRING:P40055
PaxDb:P40055 PeptideAtlas:P40055 EnsemblFungi:YER082C GeneID:856815
KEGG:sce:YER082C CYGD:YER082c eggNOG:NOG301990
GeneTree:ENSGT00390000007075 OMA:YWEEETT NextBio:983088
Genevestigator:P40055 GermOnline:YER082C Uniprot:P40055
Length = 554
Score = 219 (82.2 bits), Expect = 6.0e-34, Sum P(3) = 6.0e-34
Identities = 43/106 (40%), Positives = 68/106 (64%)
Query: 166 TGSFAQILGDFSGS-HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRS 224
+G G G+ H + YM + + G ++ + F P+ED+LG+GH G + ++VP +
Sbjct: 348 SGDSKPCFGSMGGNPHRNTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGA 406
Query: 225 SEPNFDSWVANPFETSKQRREKEVHSLLDKLLLETIMLNPSKIGTV 270
E N+D+ NPFET KQR+E+EV +LL+KL +TI L+P+ IG+V
Sbjct: 407 GEANYDALELNPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSV 452
Score = 205 (77.2 bits), Expect = 6.0e-34, Sum P(3) = 6.0e-34
Identities = 42/109 (38%), Positives = 65/109 (59%)
Query: 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK 129
T M NP+N V+ LGHS GTV++W P+ L+K+L +GPV+++A +G+ MATTG
Sbjct: 235 TMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGA 294
Query: 130 ECKIKIWDLRKYEVL---QTLTGHAKTLDFSQKGLLAVGTGSFAQILGD 175
+ +KIWD+R ++ L ++L + S GLLA+ G + D
Sbjct: 295 DRSMKIWDIRNFKQLHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKD 343
Score = 44 (20.5 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 20/107 (18%), Positives = 40/107 (37%)
Query: 65 VAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLM 124
+ R D + P++ ++ G + +T L+ ++ GP A+A +P +M
Sbjct: 191 IEARHLDFL---PYHYLLVTAGETGWLKYHDVSTGQLVSELRTKAGPTMAMAQNPWNAVM 247
Query: 125 ATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKGLLAVGTGS 168
+ +W E L L G ++ + G TG+
Sbjct: 248 HLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGA 294
Score = 42 (19.8 bits), Expect = 6.0e-34, Sum P(3) = 6.0e-34
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 20 KRQKLKGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYM 63
K +KL+ L +E Y K+ +AA + ++LP S Y+
Sbjct: 38 KDKKLRAGLKKIDEQYKKAVSSAAATD-------YLLPESNGYL 74
>WB|WBGene00009211 [details] [associations]
symbol:wdr-46 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005730 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:Z70684 HOGENOM:HOG000165037
KO:K14768 InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 GeneTree:ENSGT00390000007075 OMA:YWEEETT
PIR:T21493 RefSeq:NP_502358.1 ProteinModelPortal:Q19873 SMR:Q19873
STRING:Q19873 PaxDb:Q19873 EnsemblMetazoa:F28D1.1.1
EnsemblMetazoa:F28D1.1.2 GeneID:178185 KEGG:cel:CELE_F28D1.1
UCSC:F28D1.1.1 CTD:178185 WormBase:F28D1.1 InParanoid:Q19873
NextBio:900078 Uniprot:Q19873
Length = 580
Score = 368 (134.6 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 80/207 (38%), Positives = 120/207 (57%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
D+M NP N ++ GH+ GTV++W P + L+K+L H V +A G+ MATTG +
Sbjct: 294 DVMCQNPANAIIHTGHTNGTVSLWSPNSKEPLVKILTHLSAVKGIAVDDQGNYMATTGLD 353
Query: 131 CKIKIWDLRKYEVLQ--TLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYS---RY 185
K +IWD+R + L +L + SQK +A G+ Q+ F G HN + Y
Sbjct: 354 RKCRIWDVRMFRQLHAYSLPFGVSNVAISQKMNVACAVGNHVQV---FRGMHNGTCKEPY 410
Query: 186 MGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRRE 245
+ ++ G + + F P+EDVLGIGH+ G++ +LVP + +PN D+ +NP+ET QR+E
Sbjct: 411 LVHNC--GGVVTDLRFVPWEDVLGIGHAGGFTSMLVPGAGDPNVDTLRSNPYETKSQRKE 468
Query: 246 KEVHSLLDKLLLETIMLNPSKIGTVRE 272
+E+ LLDK+ E I LNP I V E
Sbjct: 469 REIKQLLDKIQPELISLNPDDINKVNE 495
>DICTYBASE|DDB_G0280489 [details] [associations]
symbol:wdr46 "BING4 C-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0280489 Gene3D:2.130.10.10
SUPFAM:SSF50978 GenomeReviews:CM000152_GR GO:GO:0030515
EMBL:AAFI02000036 GO:GO:0030490 GO:GO:0005732 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990
RefSeq:XP_641204.1 ProteinModelPortal:Q54VA5 STRING:Q54VA5
EnsemblProtists:DDB0233108 GeneID:8622585 KEGG:ddi:DDB_G0280489
InParanoid:Q54VA5 OMA:CEFISEV Uniprot:Q54VA5
Length = 622
Score = 308 (113.5 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 85/256 (33%), Positives = 141/256 (55%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
NP N V++LG + G V MW P + ++K+ H+ P++++A +G+ + T+G + IKI
Sbjct: 363 NPQNAVMNLGFTTGIVQMWIPKSRNPIVKLHCHKSPITSMAVSLSGNHLVTSGLDGMIKI 422
Query: 136 WDLRK-YEVLQTLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGY 194
+DLR YE + HA F+ + T A + GD ++ + S+ + Y
Sbjct: 423 FDLRNTYEEM-----HAFRTKFTPNSISLSHTNVLA-VAGD-KETYLWKNPFDTSVKEPY 475
Query: 195 QIGK-------VSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREKE 247
I K V F P+EDVLGIG G+S ILVP S N+DS A+PF + K +RE++
Sbjct: 476 LIHKNASMARNVQFCPFEDVLGIGTDNGFSSILVPGSGIANYDSMEADPFASKKMKREQD 535
Query: 248 VHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVWKN--KTK 305
+ SLL+K+ + I L+P+ IGT+++ K ++ K R+ + + + F K +TK
Sbjct: 536 IKSLLEKIPHDMISLDPNIIGTIQQGVKTDE-NKHKRQDKQRQ--DKNRQFDPKKLEETK 592
Query: 306 GRNKPSKKAKKKQELI 321
+NK +K K + E++
Sbjct: 593 QKNK-ERKEKLESEIL 607
Score = 54 (24.1 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 11 KKYLRGE-----DFKRQKLKGQLPLREELYGKSAKAAAKVEKNLVH 51
+KYL+GE K +K ++ EL +SAKAA K+E L H
Sbjct: 147 RKYLKGEIVAPTGIKNPFMKTRINKIGELKLESAKAAQKMEMLLQH 192
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 149 (57.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 43/155 (27%), Positives = 71/155 (45%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + AG +D+ ++ +P + ++ G + TV +W A + H+G
Sbjct: 422 LWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRG 481
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGLLAVGTG 167
PV LAF PNG +A+ G++ ++K+WDL + + L GH T L FSQ L
Sbjct: 482 PVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASAS 541
Query: 168 SFAQI-LGDFSGSHNYSRYMG-NSMVKGYQIGKVS 200
+ + D +H + G +S + G G S
Sbjct: 542 MDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTS 576
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 142 (55.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/162 (24%), Positives = 75/162 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 51 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 110
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 111 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 170
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVL 208
L D + S + G++ G + V F P E +L
Sbjct: 171 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLL 208
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 41/173 (23%), Positives = 76/173 (43%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
YG+ A+ + N+ LW + G G + +R +P ++ TV
Sbjct: 116 YGEFV-ASGSQDTNIK--LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK 152
+W T ++ + H GPV+ + FHPN +L+A+ + I+ WDL K++V+ + G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 153 TLDFSQKGLLAVGTGSFAQILG-DFSGSHNYSRYMGNSMVKGYQIGKVSF-RP 203
+ ++ G VG +++G + + S + S+ G F RP
Sbjct: 233 PVRYA--GSWVVGLSPPPKVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRP 283
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
YG+ A+ + N+ LW + G G + +R +P ++ TV
Sbjct: 116 YGEFV-ASGSQDTNIK--LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
+W T ++ + H GPV+ + FHPN +L+A+ + I+ WDL K++V+ + G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
YG+ A+ + N+ LW + G G + +R +P ++ TV
Sbjct: 116 YGEFV-ASGSQDTNIK--LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
+W T ++ + H GPV+ + FHPN +L+A+ + I+ WDL K++V+ + G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
YG+ A+ + N+ LW + G G + +R +P ++ TV
Sbjct: 116 YGEFV-ASGSQDTNIK--LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
+W T ++ + H GPV+ + FHPN +L+A+ + I+ WDL K++V+ + G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
YG+ A+ + N+ LW + G G + +R +P ++ TV
Sbjct: 116 YGEFV-ASGSQDTNIK--LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
+W T ++ + H GPV+ + FHPN +L+A+ + I+ WDL K++V+ + G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH++ L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT---G-PVNVVEFHPNEYLLASGSS 209
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
YG+ A+ + N+ LW + G G + +R +P ++ TV
Sbjct: 116 YGEFV-ASGSQDTNIK--LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
+W T ++ + H GPV+ + FHPN +L+A+ + I+ WDL K++V+ + G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 43/156 (27%), Positives = 77/156 (49%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY-HQ 109
LW + AG D+ ++ +P + ++ G + TV +W T +++ H+
Sbjct: 406 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS-TQQGNSVRLFTGHR 464
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFS-QKGLLAVG 165
GPV +LAF PNG +A+ G++ ++K+WDL + + L GH +L FS L+A
Sbjct: 465 GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASA 524
Query: 166 TGSFAQILGDFSGSHNYSRYMGNSM-VKGYQIGKVS 200
+ + + D SH + G+S + G G++S
Sbjct: 525 SMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMS 560
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 122 (48.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W + H+GPV +L+F PNG +A+ G++ ++K+WDL + + L G
Sbjct: 3 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 62
Query: 150 HAKT---LDFS-QKGLLA 163
H + L FS GL+A
Sbjct: 63 HTDSITSLAFSPDSGLIA 80
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 147 (56.8 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 53 LWILPSSGRYMAVAGRRT--DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + + M++ G + D + N +V G S G + +W S ++ H+
Sbjct: 42 LWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRS 101
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTG 167
SA+ FHP G +A+ + +++WD RK +QT GH + T++FS G V G
Sbjct: 102 NCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGG 161
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 144 (55.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + AG D+ ++ +P + ++ G + TV +W + H+G
Sbjct: 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFS-QKGLLAVGT 166
PV +LAF PNG +A+ G++ ++K+WDL + + L GH +L FS L+A +
Sbjct: 470 PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASAS 529
Query: 167 GSFAQILGDFSGSHNYSRYMGNSM-VKGYQIGKVS 200
+ + D +H + G+S + G G++S
Sbjct: 530 MDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMS 564
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 143 (55.4 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + AG D+ ++ +P + ++ G + TV +W + H+G
Sbjct: 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFS-QKGLLA 163
PV +LAF PNG +A+ G++ ++K+WDL + + L GH +L FS GL+A
Sbjct: 470 PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA 526
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 142 (55.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 66 AGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMA 125
AG + +P + G + +W + H GPV+A+AF NG+ +A
Sbjct: 350 AGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLA 409
Query: 126 TTGKECKIKIWDLRKYEVLQTLT----GHAKTLDFSQKGL-LAVGTGSF-AQILGDFSGS 179
T ++ +K+WDLRK + +T+T K+L F Q G LAVG I +S
Sbjct: 410 TGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEV 469
Query: 180 HNYSRYMGNSMVKGYQIGK 198
N+S + G +V G G+
Sbjct: 470 LNFSDHSG--LVTGVAFGE 486
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + ++ S TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 195 HPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL---GDFSGSHNYSRYM 186
DL + +L TL GH A + FS+ G GS Q++ +F S +YSR +
Sbjct: 255 LDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFD-SVDYSRVL 310
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY-HQ 109
LW + AG D+ ++ +P + ++ G + TV +W T +++ H+
Sbjct: 410 LWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWS-TQQGNSVRLFTGHR 468
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL 154
GPV ALAF PNG +A+ G++ ++K+WDL + + L GH +
Sbjct: 469 GPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 513
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P V+ TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 227 HPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 286
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 287 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 327
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + AG D+ ++ +P + ++ G + TV +W + H+G
Sbjct: 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFS-QKGLLA 163
PV +L+F PNG +A+ G++ ++K+WDL + + L GH + L FS GL+A
Sbjct: 470 PVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 526
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 37/137 (27%), Positives = 65/137 (47%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW G +D +R +P ++ G + + +W+ T + + H+
Sbjct: 747 LWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRA 806
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG-LLAVGT 166
P+ +AF P+G L+AT G++ + +WDL + ++ + GH K +LDFS G +LA G+
Sbjct: 807 PIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGS 866
Query: 167 GSFAQILGDFSGSHNYS 183
L D + N S
Sbjct: 867 SDCTVRLWDVKKAFNSS 883
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
NP ++ S TV +W + LL H G V+ ++FHP+G+ + T + +KI
Sbjct: 65 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 124
Query: 136 WDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 125 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 165
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 76 NPFNG--VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKI 133
NP NG + S G S TV +W + LL H G V+ ++FHP+G+ + T + +
Sbjct: 195 NP-NGTCIASAG-SDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTL 252
Query: 134 KIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
KI DL + ++ TL GH T+ FS+ G L G+ AQ+L
Sbjct: 253 KILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVL 295
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T L+ H V+AL+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
NP ++ S TV +W + LL H G V+ ++FHP+G+ + T + +KI
Sbjct: 153 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Query: 136 WDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 213 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + AG D+ ++ +P + ++ G + TV +W + H+G
Sbjct: 428 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 487
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL 154
PV +LAF PNG +A+ G++ ++K+WDL + + L GH +
Sbjct: 488 PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 531
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 135 (52.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
NP ++ S TV +W + LL H G V+ ++FHP+G+ + T + +KI
Sbjct: 195 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 254
Query: 136 WDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 255 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 138 (53.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 38/168 (22%), Positives = 77/168 (45%)
Query: 53 LWILPSSGRYMAVAGRRT--DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + +++ G + D + + G+V+ G + GT+ +W + ++ + H+
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRS 102
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG--LLAVG 165
++ FHP G A+ + +KIWD+RK + T GH + L F+ G +++ G
Sbjct: 103 NCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGG 162
Query: 166 TGSFAQILGDFSGS--HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
+ ++ +G H + + G +I + F P+E +L G
Sbjct: 163 EDNVVKVWDLTAGKLLHEFKSHEG-------KIQSLDFHPHEFLLATG 203
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 41 AAAKVEKNLVHILWILPSSGRYMAVAG--RRTDLMRVNPFNGVVSLGHSGGTVTMWKPTT 98
A+ ++ NL +W + G G R +++R P + G V +W T
Sbjct: 117 ASGSLDTNLK--IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTA 174
Query: 99 SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQ---TLTGHAKTLD 155
LL + H+G + +L FHP+ L+AT + +K WDL +E++ T T + L
Sbjct: 175 GKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLT 234
Query: 156 FSQKG 160
F+ G
Sbjct: 235 FNPDG 239
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 41 AAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTT 98
A+ EK + LW + G + G ++ + +P +++ G + T+ +W P +
Sbjct: 171 ASGSAEKTIK--LWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPS 228
Query: 99 SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLD 155
+L + H + +LAF PNG L+A+ + IK+WD TL GH+ ++
Sbjct: 229 GSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVV 288
Query: 156 FSQKG-LLAVGTG 167
FS LL G+G
Sbjct: 289 FSPDSQLLESGSG 301
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P +++ G + T+ +W P + L + H V ++AF PNG L+A+ + IK+
Sbjct: 50 SPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKL 109
Query: 136 WDLRKYEVLQTLTGHAKTLD---FSQKGLL---AVGT 166
W+ + T+ GH+ ++ FS G L A+G+
Sbjct: 110 WNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P +++ G + T+ +W T L + H V L F P+G L+A+ + IK+
Sbjct: 164 SPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKL 223
Query: 136 WDLRKYEVLQTLTGHA---KTLDFSQKG-LLAVGTGSFAQILGDFS-GSHNYSRYMGNSM 190
WD + TL GH+ ++L FS G LLA G+ L D + GS ++ + M
Sbjct: 224 WDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDM 283
Query: 191 V 191
V
Sbjct: 284 V 284
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 132 (51.5 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 49/171 (28%), Positives = 69/171 (40%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL + KS + +W S + G R + + NP+ V+
Sbjct: 93 LPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + LAF+P L+AT + K+WD+ E +
Sbjct: 153 GSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEV 212
Query: 145 QTLTGH-AK--TLDFSQKGLLAVGTGSF--AQILGDF-SGS--HNYSRYMG 187
TL GH A+ +L F+ G V TGSF IL D SG H S + G
Sbjct: 213 STLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVLSGHRG 262
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 134 (52.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
D ++ +P + ++ G + TV +W + H GPV LAF PNG + + G++
Sbjct: 427 DCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGED 486
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFS-QKGLLAVGTGSFAQILGDFSGSHNYSRYM 186
+K+WDL + + L GH ++ FS ++A + + + D HN +
Sbjct: 487 QLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPAD 546
Query: 187 GNSM-VKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPN 228
G+S + G G++S VL + G S +LV E N
Sbjct: 547 GSSSELLGVYTGQMS-----TVLNVQFMAG-SRLLVTGIREEN 583
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 131 (51.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+ L+FHP+G+ + T + +KI
Sbjct: 158 HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 218 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 258
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+ L+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/123 (26%), Positives = 66/123 (53%)
Query: 52 ILWILPSSGRYMA-VAGRRTDLM-RVNPFNG-VVSLGHSGGTVTMWKPTTSALLIKMLYH 108
+LW +SG+ +A + G +++ + G +++ + GT ++ TT + K+ H
Sbjct: 286 MLWDA-TSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGH 344
Query: 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL---DFSQKGLLAVG 165
+G +S ++F+P G+ + T + +IWD++ + LQ L GH + F+ KG + +
Sbjct: 345 EGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVI- 403
Query: 166 TGS 168
TGS
Sbjct: 404 TGS 406
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 32/123 (26%), Positives = 52/123 (42%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
+W S + G R + + NP+ ++ G T +W T H
Sbjct: 118 VWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHT 177
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGT 166
+ L+F+P ++AT + K+WD++ E + TLTGH +L F G + T
Sbjct: 178 AEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRII-T 236
Query: 167 GSF 169
GSF
Sbjct: 237 GSF 239
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/148 (26%), Positives = 60/148 (40%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL KS + LW S + G R + + NP+ ++
Sbjct: 93 LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + L+F+P L+AT + K+WD++ E +
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Query: 145 QTLTGHAK---TLDFSQKGLLAVGTGSF 169
TLTGH+ +L F+ G + TGSF
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRII-TGSF 239
Score = 115 (45.5 bits), Expect = 0.00069, P = 0.00069
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
+++ + GT ++ T + K+ H+G +S ++F+P G+ + T + +IWD +
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Query: 141 YEVLQTLTGHAKTL---DFSQKGLLAVGTGS 168
+ LQ L GH + F+ KG + + TGS
Sbjct: 377 GQCLQVLEGHTDEIFSCAFNYKGDIII-TGS 406
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/120 (30%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW S+ G +D+ ++ +P + V+ G S TV +W T + M H+G
Sbjct: 518 LWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKG 577
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGLLAVGTG 167
VS+LAF G +A+ + I IWDL ++ TL H T + FS+ G + G
Sbjct: 578 SVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAG 637
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
G + +WK +T+ LL + H GPV F +G L A+ +C ++ W + TLT
Sbjct: 44 GKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLT 103
Query: 149 GHAK---TLDFSQKG--LLAVGTGSFAQILGDFSGS 179
H + T+ FS G LL+ G + A I SG+
Sbjct: 104 AHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGA 139
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 53 LWILPSSGRYMAVAGRRTDLM--RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + ++ G + TV +W + H+G
Sbjct: 591 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKG 650
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +LAF PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 651 PIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGS 710
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/165 (23%), Positives = 74/165 (44%)
Query: 53 LWILPSSGRYMAVAGRRT--DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + +++ G + D + + +V+ G + GT+ +W + ++ + H+
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTG 167
++ FHP G A+ + +KIWD+RK + T GH + L F+ G V G
Sbjct: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGG 162
Query: 168 SFAQI-LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
+ + D + + + + +G QI + F P+E +L G
Sbjct: 163 EDNIVKVWDLTAGKLLTEFKSH---EG-QIQSLDFHPHEFLLATG 203
Score = 129 (50.5 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 41 AAAKVEKNLVHILWILPSSGRYMAVAG--RRTDLMRVNPFNGVVSLGHSGGTVTMWKPTT 98
A+ ++ NL +W + G G R +++R P V G V +W T
Sbjct: 117 ASGSLDTNLK--IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Query: 99 SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT---LTGHAKTLD 155
LL + H+G + +L FHP+ L+AT + +K WDL +E++ + T + L
Sbjct: 175 GKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLS 234
Query: 156 FSQKG 160
F+ G
Sbjct: 235 FNPDG 239
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 53 LWILPSSGRYMAVAGRRTDLM--RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G S TV +W + H+G
Sbjct: 567 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKG 626
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +LAF PNG +A+ + ++ +WD+ ++ L GH T L FS+ G ++A G+
Sbjct: 627 PIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGS 686
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G + TV +W + H+G
Sbjct: 371 LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 430
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +L F PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 431 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 490
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/167 (23%), Positives = 73/167 (43%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W + M++ G T + ++++ ++ G G++ +W + +L +L H+
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ + IK+WD+R+ + H + L FS G LA
Sbjct: 107 NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + + G+S G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKVMFEFTGHS---G-PVNVVEFHPSEYLLASGSS 209
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+R +P ++ TV +W T ++ + H GPV+ + FHP+ +L+A+ +
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRT 212
Query: 133 IKIWDLRKYEVLQTLTGHA 151
I+ WDL K+ V+ + A
Sbjct: 213 IRFWDLEKFHVVSCIEEEA 231
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/103 (34%), Positives = 54/103 (52%)
Query: 76 NPFNG--VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKI 133
NP NG + S G S TV +W + LL H G V+ ++FHP+G+ + T + +
Sbjct: 195 NP-NGTCIASAG-SDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTL 252
Query: 134 KIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
KI DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 253 KILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
NP ++ S TV +W + LL H G V+ ++FHP+ + + T + +KI
Sbjct: 195 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKI 254
Query: 136 WDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 255 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
G V +W + LL ++ H+GPV + F P+G L+A++ + I++WD+ + + L L
Sbjct: 48 GCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLK 107
Query: 149 GHAKTLD 155
GH ++++
Sbjct: 108 GHQRSVE 114
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 79 NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDL 138
+G+++ G T+ +WKPTT+ L +++ H V++LAF P+ +A+ G +K+WD
Sbjct: 208 SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDC 267
Query: 139 RKYEVLQTLTG 149
+ L+TL G
Sbjct: 268 LTGKCLETLKG 278
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G + TV +W + H+G
Sbjct: 609 LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 668
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +L F PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 669 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 728
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G + TV +W + H+G
Sbjct: 611 LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 670
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +L F PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 671 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 730
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G + TV +W + H+G
Sbjct: 611 LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 670
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +L F PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 671 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 730
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G + TV +W + H+G
Sbjct: 612 LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 671
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +L F PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 672 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 731
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW AG D+ R +P + V+ G + TV +W + H+G
Sbjct: 612 LWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 671
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P+ +L F PNG +AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 672 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 731
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 38 SAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWK 95
S K A L+ I + +PS R ++ T + M ++P N +++ G + G V +W
Sbjct: 73 SKKLIAAFRSRLLTI-YEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWD 131
Query: 96 PTTSALLIKMLYHQGPVSALAF--HPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT 153
+ + H G +SAL F H N ++A+ + ++++WDL + GH+
Sbjct: 132 IAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSV 191
Query: 154 LDFSQKGLLAVGTGSF 169
+ +GL TGSF
Sbjct: 192 I----RGLTFEPTGSF 203
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 31/92 (33%), Positives = 52/92 (56%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
V++ G TV +W P T +L + H G V ++AF P+G L+A+ + +++WD
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 141 YEVLQTLTGHA---KTLDFSQKGLLAVGTGSF 169
+ QTL GH+ +++ FS G L + +GSF
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRL-LASGSF 799
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 53 LWILPSSGRYM-AVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW P++G + G ++ V +P +++ G TV +W P T +L + H
Sbjct: 721 LWD-PATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHS 779
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKGLLAVGT 166
V ++AF P+G L+A+ + +++WD + QTL GH+ T+ FS G L + +
Sbjct: 780 NWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRL-LAS 838
Query: 167 GSF 169
GSF
Sbjct: 839 GSF 841
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P+ ++++ + ++ + S LL + H PV+ +AFHP+GH + + + I+I
Sbjct: 195 HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Query: 136 WDLRKYEVLQTLTGHAKTLD---FSQKG-LLAVGTGSFAQILGDFSGSHNY 182
DL + + TLTGH ++ FS+ G A G GS Q+L S H Y
Sbjct: 255 LDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATG-GSDRQLLVWQSNLHTY 304
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+R P ++ + TV +W +A I+ H PV+ +A+ P G+L+A+ G +
Sbjct: 24 LRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRT 83
Query: 133 IKIWDLRKYEVLQTLTGHAK---TLDFSQKGLL 162
+KIW+ + V H+K ++DF G L
Sbjct: 84 VKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHL 116
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 38/148 (25%), Positives = 59/148 (39%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL KS + LW S + G R + + NP+ ++
Sbjct: 93 LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + L+F+P L+AT + K+WD++ E +
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEV 212
Query: 145 QTLTGHAK---TLDFSQKGLLAVGTGSF 169
TL GH+ +L F+ G + TGSF
Sbjct: 213 YTLRGHSAEIISLSFNTSGDRII-TGSF 239
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 31/122 (25%), Positives = 63/122 (51%)
Query: 53 LWILPSSGRYMA-VAGRRTDLM-RVNPFNG-VVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW ++G+ +A + G +++ + G +++ + GT ++ T + K+ H+
Sbjct: 287 LWDA-TNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHE 345
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL---DFSQKGLLAVGT 166
G +S ++F+P G+ + T + +IWD + + LQ L GH + F+ KG + + T
Sbjct: 346 GEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVI-T 404
Query: 167 GS 168
GS
Sbjct: 405 GS 406
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+R +P ++ TV +W T ++ + H GPV+ + FHPN +L+A+ +
Sbjct: 10 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 69
Query: 133 IKIWDLRKYEVLQTLTG 149
I+ WDL K++V+ + G
Sbjct: 70 IRFWDLEKFQVVSCIEG 86
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 29 PLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAG----RRTDLMRVNPFNGVVSL 84
PL + + K A + V LW +P +AV R TD++ +P + ++
Sbjct: 257 PLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVV-FSPVDDCLAT 315
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
+ T +WK T LL H ++ +AFHP+G + TT + ++WD+ L
Sbjct: 316 ASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Query: 145 QTLTGHAKT---LDFSQKGLLAVGTG--SFAQI 172
GH+++ + F Q G LA G S A++
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARV 407
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 43/178 (24%), Positives = 79/178 (44%)
Query: 3 SYELDTKVKKYLRGEDFKRQKLKGQLP-LREELYGKSAKAAAKVEKNLVHILWILPSSGR 61
S LD+ +K + ++ L+G +R + K A + LW P +G
Sbjct: 1061 SSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN-PLTGE 1119
Query: 62 YM-AVAGRR--TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFH 118
+ GR D + +P ++ G+ T+ +W T LL + H + ++ F
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 119 PNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKGLLAVGTGSFAQIL 173
P+G L+A+ + K+WD E+LQ GH+K ++ FS G L + + S+ + +
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKL-LASSSYGETI 1236
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G TV +W P T LL + H G V +LAF P+G L+A+ + I +WD E+L
Sbjct: 768 GSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELL 827
Query: 145 QTLTGHAKTL 154
QT GH ++
Sbjct: 828 QTFEGHPHSI 837
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 41/157 (26%), Positives = 73/157 (46%)
Query: 3 SYELDTKVKKYLRGEDFKRQKLKGQLP-LREELYGKSAKAAAK-VEKNLVHILWILPSSG 60
S LD+ +K + +Q L+G+ ++ + K A EKN V LW P++G
Sbjct: 893 SSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVK-LWN-PATG 950
Query: 61 RYM-AVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAF 117
+ + G + V +P ++ S T+ +W TT L H + A+AF
Sbjct: 951 ELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAF 1010
Query: 118 HPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL 154
P+G + + + IK+WDL E+ Q+L H++++
Sbjct: 1011 SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSV 1047
Score = 121 (47.7 bits), Expect = 0.00070, P = 0.00070
Identities = 36/137 (26%), Positives = 62/137 (45%)
Query: 30 LREELYGKSAKAAAKVEKNLVHILWILPSSGRYM-AVAGRRTDLMRV--NPFNGVVSLGH 86
+R + K A + +W P++G ++ GR + V +P ++ G
Sbjct: 879 VRSVAFSPDGKLLASSSLDSTIKVWN-PATGELQQSLEGRSGWVKSVAFSPDGKKLASGS 937
Query: 87 SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146
TV +W P T LL + H V ++AF P+G +A++ + IK+W+ E+ QT
Sbjct: 938 EKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQT 997
Query: 147 LTGH---AKTLDFSQKG 160
GH + + FS G
Sbjct: 998 FKGHDLWIRAVAFSPDG 1014
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 123 (48.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
+++ G + G + +W+ T LL+ + HQ V L+F PNG L+ + K ++IWDL
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLN 184
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 185 KHGKQIQVLSGH 196
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 418
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 419 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 418
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 419 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 418
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 419 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 418
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 419 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 418
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 419 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 418
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 419 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 360 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 419
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 420 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 460
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 124 (48.7 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + +W + H GP++++AF NG+ +AT + +K+
Sbjct: 368 HPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKL 427
Query: 136 WDLRKYEVLQTL----TGHAKTLDFSQKGL-LAVGTGSFAQI 172
WDLRK + +TL K+L F Q G LA+G G+ QI
Sbjct: 428 WDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 468
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 38/165 (23%), Positives = 71/165 (43%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W + M++ G + + ++ N V G G++ +W + +L ++ H+
Sbjct: 47 IWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+S+L FHP G +A+ + IK+WD+R+ + GH + L FS G LA +
Sbjct: 107 SISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASAS 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
L D + + ++ + V F P E +L G
Sbjct: 167 DDSTVKLWDLIAGKMITEFTSHTSA----VNVVQFHPNEYLLASG 207
Score = 113 (44.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 34/141 (24%), Positives = 66/141 (46%)
Query: 41 AAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRVNPFN--GV-VSLGHSGGTVTMWKPT 97
A+ V+ N+ LW + G G T +R F+ G ++ TV +W
Sbjct: 121 ASGSVDSNIK--LWDVRRKGCVFRYKGH-TQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 98 TSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTL 154
++ + H V+ + FHPN +L+A+ + +K+WDL K+ ++ + TG +++
Sbjct: 178 AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSV 237
Query: 155 DFSQKG-LLAVGTGSFAQILG 174
F+ G L G+ + ++ G
Sbjct: 238 LFNPDGSCLYSGSENTLRVYG 258
Score = 49 (22.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 36/154 (23%), Positives = 63/154 (40%)
Query: 176 FSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVAN 235
+SGS N R G + + + V + D L I ++ ++ S N SW
Sbjct: 247 YSGSENTLRVYGWEPDRCFDVVHVGWGKVSD-LAISNNQ----MIAVSYSHTNV-SWYVV 300
Query: 236 PFETSKQRREKEVHSLLDKLLLETIMLNPSK-IGTVREAKKKEKPTKQGREAEMEAAVEA 294
R K+ S++ L+ + + PS +GT + E+PT EM+ + EA
Sbjct: 301 DLN-----RVKKSGSVIQGLIQDKPIPAPSSALGTTLR-RNYERPTTSCTGQEMKQSSEA 354
Query: 295 IKGFVWKNKTKGRNKPSKKAKKK-QELIAHARRP 327
+ ++ R PS + +K+ +E A P
Sbjct: 355 DR----RSPEGERRSPSSEDEKEDKESSAEITNP 384
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/101 (29%), Positives = 50/101 (49%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ + TV +W + LL H V++L+FHP+G+ + T + +KI
Sbjct: 197 HPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A + FS+ G GS Q++
Sbjct: 257 LDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVM 297
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 30/115 (26%), Positives = 50/115 (43%)
Query: 74 RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKI 133
R +P +++ TV +W T+ + H G + + FHP+G +A G + +
Sbjct: 153 RFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTV 212
Query: 134 KIWDLRKYEVLQTLTGHA---KTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYS 183
K+WD+R +LQ H +L F G L+ S +IL G Y+
Sbjct: 213 KVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYT 267
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 79 NG--VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIW 136
NG + S G S V +W + LL H V+ L+FHP+G+ + T + +KI
Sbjct: 197 NGTCIASAG-SDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKIL 255
Query: 137 DLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
DL + ++ TL GH T+ FS+ G L G+ AQ+L
Sbjct: 256 DLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 114 (45.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/159 (22%), Positives = 68/159 (42%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + + + G + + P +VS G + +W + ++ + H
Sbjct: 291 LWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIR 350
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKGLLAVGTGSFA 170
+ A+A+ PNG+ +AT+ + +KIWDLRK + T+ H+ + S + G F
Sbjct: 351 QIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLV--SDVRYIESGVNRFI 408
Query: 171 QILGDFSGSHNYSRYMGNSMVK---GYQIGKVSFRPYED 206
G + G + S++K G++ +S Y D
Sbjct: 409 ATSG-YDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGD 446
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 1 EISYELDTKVKKYLR---------GEDF--KRQKLKGQLPLREELYG 36
+I YE D+KV++YLR GED +RQ+L+ QL + + L G
Sbjct: 45 KIPYE-DSKVREYLRRYGEPITYFGEDALARRQRLQ-QLMIEKSLEG 89
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 98 (39.6 bits), Expect = 0.00019, P = 0.00019
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS+L +G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTAWK------LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 149 GHAKTLD 155
GH ++
Sbjct: 61 GHTSPVE 67
>UNIPROTKB|H3BTV8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0030424 GO:GO:0043025 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000566785 Bgee:H3BTV8 Uniprot:H3BTV8
Length = 79
Score = 98 (39.6 bits), Expect = 0.00019, P = 0.00019
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS+L +G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTAWK------LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 149 GHAKTLD 155
GH ++
Sbjct: 61 GHTSPVE 67
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G V +W + + H GP+SA++F NG+ +AT + +K+
Sbjct: 359 HPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKL 418
Query: 136 WDLRK---YEVLQTLTGH-AKTLDFSQKGLLAVGTGSFAQI 172
WDLRK ++ +Q G+ K L F Q G GS ++
Sbjct: 419 WDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGSDVRV 459
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ G + V +W T + + K H GPV+A++F NG+ +AT + +K+
Sbjct: 361 HPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALD-GVKL 419
Query: 136 WDLRKYEVLQTLTGH-----AKTLDFSQKG-LLAVGTGSFAQI 172
WDLRK +T++ + +++F G LAVG GS ++
Sbjct: 420 WDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVG-GSDTRV 461
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 62 YMAVAGRRTDLMRVNPFNG--VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHP 119
Y+ TD +R G +VS + G T+ +WK +T L + H G V ++ +P
Sbjct: 569 YIRTLRGHTDSVREVACLGDLIVSASYDG-TLRVWKASTGVCLHVLRGHVGRVYSVTINP 627
Query: 120 NGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKGLLA 163
+ + G + KI+IW+L E+LQTL GH+ + F+Q L++
Sbjct: 628 SRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVS 674
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
V++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 125 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 185 KHGKQIQVLSGH 196
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 35/103 (33%), Positives = 52/103 (50%)
Query: 76 NPFNG--VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKI 133
NP NG + S G S V +W + LL H V+ L+FHP G+ + T + +
Sbjct: 195 NP-NGTCIASAG-SDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTV 252
Query: 134 KIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
K+ DL + ++ TL GH T+ FS+ G L G+ AQ+L
Sbjct: 253 KMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVL 295
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
V++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 127 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 187 KHGKQIQVLSGH 198
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWK 95
K KA + +++V I W S+ ++ A + P ++S G T+ MW
Sbjct: 266 KECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLS-GSRDKTIKMWD 324
Query: 96 PTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AK 152
+T L+ ++ H V + FHP G + + + ++IWD + ++TL+ H
Sbjct: 325 ISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVT 384
Query: 153 TLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 385 SLDFHKASPYVV-TGSVDQ 402
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
V++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 142 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 201
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 202 KHGKQIQVLSGH 213
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 118 (46.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 29/96 (30%), Positives = 50/96 (52%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
+ S G + T+ +W T+ L+ H V+ +FHP+G+ + + + IKI DL +
Sbjct: 201 IASSG-ADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Query: 141 YEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
++ TL GH T+ FS+ G L G+ +Q+L
Sbjct: 260 GRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVL 295
Score = 43 (20.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 224 SSEPNFDSWV-ANPFETSKQRREKE 247
SS F S + + PF T Q RE+E
Sbjct: 379 SSRAQFTSGMDSGPFRTHTQAREEE 403
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
+++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 185 KHGKQIQVLSGH 196
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
+++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 185 KHGKQIQVLSGH 196
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
+++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 187 KHGKQIQVLSGH 198
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLR 139
+++ G + G + +W+ T LL+ + HQ V L+F P+G L+ + K ++IWDL
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 140 KY-EVLQTLTGH 150
K+ + +Q L+GH
Sbjct: 187 KHGKQIQVLSGH 198
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 42/172 (24%), Positives = 71/172 (41%)
Query: 25 KGQL-PLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGV 81
KG P+ + +G A + LW AG +D+ + +P +
Sbjct: 418 KGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAY 477
Query: 82 VSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKY 141
V G S T +W + H PV+A+A P+GH MA+ E I +WD+
Sbjct: 478 VLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTG 537
Query: 142 EVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSM 190
++T+ GH +L FS++ + V GS + NY+ + +S+
Sbjct: 538 RRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSL 589
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 27/102 (26%), Positives = 54/102 (52%)
Query: 63 MAVAGRRTDLMRVNPFNGVVSLGHSG-GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNG 121
++++ D++ +N ++ G S G + +W+ + + ++K H ++ALA+ P+G
Sbjct: 291 LSISQSNIDVVSINKTGEWLAFGSSKFGQLLVWEWQSESYILKQQGHLDSMNALAYSPDG 350
Query: 122 HLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL---DFSQKG 160
+ T + KIK+WD++ L T T H + FS+KG
Sbjct: 351 QRIVTAADDGKIKVWDVKSGFCLVTFTEHTSGVTACQFSKKG 392
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + G + V +W + H V ++AF NG+ +AT ++ ++K+
Sbjct: 347 HPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKL 406
Query: 136 WDLRKYEVLQTLTGHAK----TLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSM 190
WDLRK + L+T K +L F G L +G G Q+L S S S +
Sbjct: 407 WDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGIG-GQKVQVLHVKSWSEVVSLSDHSGP 465
Query: 191 VKGYQIGK 198
V G + G+
Sbjct: 466 VTGVRFGE 473
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 36/133 (27%), Positives = 62/133 (46%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W + +AG +D+ ++ +P ++ G S TV +W T + + H+
Sbjct: 486 IWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 545
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG-LLAVGT 166
V +LA P+G MA+ ++ I +WDL + L GH +L +S +G LLA G+
Sbjct: 546 MVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGS 605
Query: 167 GSFAQILGDFSGS 179
L D + S
Sbjct: 606 ADCTVKLWDVTSS 618
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 29 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 87
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 88 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 126
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 201 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 257
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 258 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 317
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 318 VTSLDFHKTAPYVV-TGSVDQ 337
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 114 (45.2 bits), Expect = 0.00051, P = 0.00051
Identities = 34/125 (27%), Positives = 56/125 (44%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWK---PTTSAL--LIKMLYHQGPVSALAFHPNGHLMATT 127
+ ++ G+V ++ G +W+ TS L K+ H P+ F P+ L+AT
Sbjct: 166 LTISSDGGLVVASNTKGKCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATC 225
Query: 128 GKECKIKIWDLRKYEVLQTLTGHAKTL-D--FSQ-KGLLAVGTGSFAQILGDFSGSHNYS 183
+ +KIW+ +K+ V+QTL GH + + D FS L G+ L D
Sbjct: 226 SADHTVKIWNTKKFNVVQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQGDAVK 285
Query: 184 RYMGN 188
Y G+
Sbjct: 286 TYSGH 290
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 39/168 (23%), Positives = 72/168 (42%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W + M++ G T + ++++ ++ G G++ +W + +L +L H+
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ + IK+WD+R+ + H + L FS G LA
Sbjct: 107 NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP-YEDVLGIGHS 213
L D + + G+ G + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKVMFEFTGHY---G-PVNVVEFHPSIEYLLASGSS 210
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F +G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 47 KNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIK 104
K+L LW L + AG D+ V +P ++ G + +V +W T+ L+
Sbjct: 559 KDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRV 618
Query: 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL 154
+ V+ LAF P+G ++A G+E K++I+DL L L H+ ++
Sbjct: 619 FADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASI 668
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ G S V +W + A + K H G V+A++F NG+ +AT ++ +++
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRL 420
Query: 136 WDLRKYEVLQT-LTGHAKTLDFSQKG 160
WDLRK ++ L+ A +++F G
Sbjct: 421 WDLRKLRNFKSFLSADANSVEFDPSG 446
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG-LLA 163
H V++++ HP G+ +A+ G + KIKIWDLR+ + TL + K T+ F+Q G A
Sbjct: 271 HDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFA 330
Query: 164 VGTGS 168
G GS
Sbjct: 331 TG-GS 334
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK-YEVLQTLT 148
T+ +W T +L+ + H +S LA+ + H + +C ++IWD R YE L+ L
Sbjct: 66 TMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR 125
Query: 149 GHAK---TLDFSQKGLLAVGTGSFAQIL 173
GH ++F+ L V +GSF + +
Sbjct: 126 GHTNFVFCVNFNPPSNLIV-SGSFDETI 152
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W LL + H+GPV L FHP + + G + IK+W L + L TLTG
Sbjct: 34 TIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTG 93
Query: 150 H 150
H
Sbjct: 94 H 94
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 100 (40.3 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 83 SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDL 138
S GHS + +W T + H+GPV +A H +G L+AT G + K+ +WD+
Sbjct: 77 SAGHSR-QIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Score = 66 (28.3 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 251 LLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVWKNKTKGRNKP 310
LLD L E +++P + T E K EK ++ A ME + +K K K +
Sbjct: 800 LLDYTLGEMSVIDPETVET--EYPKDEKKKEKDVIAAMEQDTDELKQETPSRKRKSQKSK 857
Query: 311 SKKAKKKQELIAHAR 325
K KK+ LIA A+
Sbjct: 858 GKSNKKR--LIAEAQ 870
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 157 SQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNS 189
+ K + VGTG IL ++S ++ S
Sbjct: 434 TSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGS 466
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 36/159 (22%), Positives = 68/159 (42%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W + M++ G T + ++++ ++ G G++ +W + +L +L H+
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKGL-LAVGT 166
+ +L FHP G +A+ + IK+WD+R+ + H + L FS G LA
Sbjct: 107 NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE 205
L D + + G+ G + V F P E
Sbjct: 167 DDHTVKLWDLTAGKVMFEFTGHY---G-PVNVVEFHPSE 201
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI +Y A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 37 KSAKAAAKVEKNLVH-ILWILPSSGRYMAVA-GRRTDLM-RVNPFNGVVSLGHSGGTVTM 93
K KA + +++V I W SS ++ A G T + PF ++S G T+ M
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPF--LLS-GSRDKTIKM 322
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150
W +T L+ ++ H V + FH G + + + +++WD + ++TL H
Sbjct: 323 WDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHF 382
Query: 151 AKTLDFSQKGLLAVGTGSFAQ 171
+LDF + V TGS Q
Sbjct: 383 VTSLDFHKTAPYVV-TGSVDQ 402
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00093
Identities = 38/127 (29%), Positives = 54/127 (42%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NP---FNGVVSLGHSGGTVTMWKPTTSALLIKMLY 107
LW L S + G + RV +P F G HS +W ++
Sbjct: 292 LWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSW---RLWDLEVQEEILHQEG 348
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGL-LA 163
H V L FHP+G L T G + ++WDLR + L GH K +++FS G +A
Sbjct: 349 HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVA 408
Query: 164 VGTGSFA 170
G+G A
Sbjct: 409 TGSGDNA 415
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 359 340 0.00095 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 126
No. of states in DFA: 614 (65 KB)
Total size of DFA: 224 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.59u 0.23s 31.82t Elapsed: 00:00:02
Total cpu time: 31.61u 0.23s 31.84t Elapsed: 00:00:02
Start: Fri May 10 11:04:18 2013 End: Fri May 10 11:04:20 2013
WARNINGS ISSUED: 1