BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040274
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P4X3|UTP7_SCHPO Probable U3 small nucleolar RNA-associated protein 7
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp7 PE=3 SV=1
Length = 520
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 162/290 (55%), Gaps = 18/290 (6%)
Query: 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK 129
+ ++ NP N V +GH+ G VT+W P+++ L+KML H+GPV LA + +G M T G
Sbjct: 226 SHVLHQNPHNAVEHVGHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGA 285
Query: 130 ECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMG 187
+ +K+WDLR Y+ L + A+ L S +GLLAVG G A I D + YM
Sbjct: 286 DSLLKVWDLRTYKELHSYYTPTPAQRLTLSDRGLLAVGWGPHATIWKDALRTKQNFPYM- 344
Query: 188 NSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREKE 247
N ++ + + + PYED+LGIGH+ G+ I+VP S EPN+DS+ +PF + KQR+E E
Sbjct: 345 NHLLPSSSVVDLHYCPYEDILGIGHAKGFESIIVPGSGEPNYDSYENDPFASRKQRQETE 404
Query: 248 VHSLLDKLLLETIMLNPSKIGTVREAKKKEKPTKQGREAEMEAAVEAIKGFVWKNKTKGR 307
V LL+KL E I LN IG V ++ R+AE E + +V K K +G+
Sbjct: 405 VRQLLEKLRPEMISLNADFIGNV------DRAAPSLRKAEAEEEKPPEEKWVPKAKARGK 458
Query: 308 NKPSKKAKKKQELIAHARRPFLDQQLKEEQSLSKKK----QKLFEEVELP 353
N ++ +K HAR ++LK E+SL +K Q++ E +LP
Sbjct: 459 NSALRRYLRK-----HARNVVDQRRLKVEKSLEIEKKMRAQRVRREQKLP 503
>sp|Q5TJE7|WDR46_CANFA WD repeat-containing protein 46 OS=Canis familiaris GN=WDR46 PE=3
SV=1
Length = 612
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 169/301 (56%), Gaps = 20/301 (6%)
Query: 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG 128
R D+M NP+N V+ LGHS GTV++W P L K+L H+G V A+A G MAT+G
Sbjct: 320 RLDVMTKNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSG 379
Query: 129 KECKIKIWDLR-KYEVL--QTLTGHAKTLDFSQKGLLAVGTGSFAQI---LGDFSGSHNY 182
+ ++KI+DLR ++ L +TL A L FSQ+GLLA G I G S
Sbjct: 380 LDHQLKIFDLRGMFQPLSARTLPQGAGHLAFSQRGLLAAGMSDVVNIWMGQGMASPPSLE 439
Query: 183 SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQ 242
Y+ + + G+ G + F P+EDVLG+GHS G + +LVP ++EPNFD NP+ + KQ
Sbjct: 440 QPYLTHRL-SGHVHG-LHFCPFEDVLGLGHSGGITSMLVPGAAEPNFDGLENNPYRSQKQ 497
Query: 243 RREKEVHSLLDKLLLETIMLNPSKIGTVR----EAKKKEKPTKQGREAEMEAAVEAIKGF 298
R+E EV +LL+K+ E I L+P + V E +KKE+ + G + E +A F
Sbjct: 498 RQEWEVKALLEKVPAELICLDPRALAEVDVISLEQEKKERIERLGYDPEAKAP------F 551
Query: 299 VWKNKTKGRNKPSKKAKKKQELIAHARRPFLDQQLKEEQSLSKKKQKLFEEVELPASLRR 358
K K KGR+ + K++++++ R + Q L+++ +KK K + P++L R
Sbjct: 552 QPKPKQKGRSSTASLVKRRRKVMDKEHRDKVRQSLEQQPQKQEKKAKPLK--ARPSALDR 609
Query: 359 F 359
F
Sbjct: 610 F 610
>sp|Q9Z0H1|WDR46_MOUSE WD repeat-containing protein 46 OS=Mus musculus GN=Wdr46 PE=2 SV=1
Length = 622
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 170/307 (55%), Gaps = 19/307 (6%)
Query: 63 MAVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGH 122
+ V R +M NP+N V+ LGHS GTV++W P L K+L H+G V A+A G
Sbjct: 312 LNVRAGRLSVMAQNPYNAVIHLGHSNGTVSLWSPAVKEPLAKILCHRGGVRAVAVDSTGT 371
Query: 123 LMATTGKECKIKIWDLR-KYEVL--QTLTGHAKTLDFSQKGLLAVGTGSFAQIL---GDF 176
MAT+G + ++KI+DLR ++ L +TL A L FSQ+GLL G G I G
Sbjct: 372 YMATSGLDHQLKIFDLRGTFQPLSSRTLPQGAGHLAFSQRGLLVAGMGDVVNIWAGQGKA 431
Query: 177 SGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANP 236
S Y+ + + G+ G + F P+EDVLG+GHS G++ +LVP ++EPNFD NP
Sbjct: 432 SPPSLEQPYLTHRL-SGHVHG-LQFCPFEDVLGVGHSGGFTSMLVPGAAEPNFDGLENNP 489
Query: 237 FETSKQRREKEVHSLLDKLLLETIMLNPSKIGTVR----EAKKKEKPTKQGREAEMEAAV 292
+ + KQR+E EV +LL+K+ E I LNP + V E +KKE+ + G + + +AA
Sbjct: 490 YRSRKQRQEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQKKERIERLGYDPDAKAA- 548
Query: 293 EAIKGFVWKNKTKGRNKPSKKAKKKQELIAHARRPFLDQQLKEEQSLSKKKQKLFEEVEL 352
F K K KGR+ + K+K++++ R + Q L E+Q KK+
Sbjct: 549 -----FQPKAKQKGRSSTASLVKRKKKVMDQEHRDKVRQSL-EQQQQKKKQDMAMPPGAR 602
Query: 353 PASLRRF 359
P++L RF
Sbjct: 603 PSALDRF 609
>sp|O15213|WDR46_HUMAN WD repeat-containing protein 46 OS=Homo sapiens GN=WDR46 PE=1 SV=3
Length = 610
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 165/304 (54%), Gaps = 27/304 (8%)
Query: 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG 128
R D+M NP+N V+ LGHS GTV++W P L K+L H+G V A+A G MAT+G
Sbjct: 319 RLDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSG 378
Query: 129 KECKIKIWDLR-KYEVL--QTLTGHAKTLDFSQKGLLAVGTGSFAQIL---GDFSGSHNY 182
+ ++KI+DLR Y+ L +TL A L FSQ+GLL G G I G S
Sbjct: 379 LDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPPSLE 438
Query: 183 SRYMGNSM---VKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVANPFET 239
Y+ + + V G Q F P+EDVLG+GH+ G + +LVP + EPNFD +NP+ +
Sbjct: 439 QPYLTHRLSGPVHGLQ-----FCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPYRS 493
Query: 240 SKQRREKEVHSLLDKLLLETIMLNPSKIGTVR----EAKKKEKPTKQGREAEMEAAVEAI 295
KQR+E EV +LL+K+ E I L+P + V E KKE+ + G + + +A
Sbjct: 494 RKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQGKKEQIERLGYDPQAKAP---- 549
Query: 296 KGFVWKNKTKGRNKPSKKAKKKQELIAHARRPFLDQQLKEEQSLSKKKQKLFEEVELPAS 355
F K K KGR+ + K+K++++ R + Q L+++ K+ K P++
Sbjct: 550 --FQPKPKQKGRSSTASLVKRKRKVMDEEHRDKVRQSLQQQHH---KEAKAKPTGARPSA 604
Query: 356 LRRF 359
L RF
Sbjct: 605 LDRF 608
>sp|P40055|UTP7_YEAST U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP7 PE=1
SV=1
Length = 554
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 167/302 (55%), Gaps = 34/302 (11%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
M NP+N V+ LGHS GTV++W P+ L+K+L +GPV+++A +G+ MATTG +
Sbjct: 238 MAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGADRS 297
Query: 133 IKIWDLRKYEVL---QTLTGHAKTLDFSQKGLLAVGTGSFAQILGD---FSGS------- 179
+KIWD+R ++ L ++L + S GLLA+ G + D SG
Sbjct: 298 MKIWDIRNFKQLHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKDALKLSGDSKPCFGS 357
Query: 180 -----HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWVA 234
H + YM + + G ++ + F P+ED+LG+GH G + ++VP + E N+D+
Sbjct: 358 MGGNPHRNTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALEL 416
Query: 235 NPFETSKQRREKEVHSLLDKLLLETIMLNPSKIGTVRE--------AKKKEKPT-KQGRE 285
NPFET KQR+E+EV +LL+KL +TI L+P+ IG+V + AK + T +
Sbjct: 417 NPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSVDKRSSTIRLNAKDLAQTTMDANNK 476
Query: 286 AEMEAAVEAIKGFVWKNKTKGRNKPSKK-AKKKQELIAHARRPFLDQQLKEEQSLSKKKQ 344
A+ + + +K V KG+N + +KK + + R+ + +QL +E+++ K+
Sbjct: 477 AKTNSDIPDVKPDV-----KGKNSGLRSFLRKKTQNVIDERKLRVQKQLDKEKNIRKRNH 531
Query: 345 KL 346
++
Sbjct: 532 QI 533
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA---KTLDFSQKG-LLAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH+ + L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT----GPVNVVEFHPNEYLLASGSS 209
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
+R +P ++ TV +W T ++ + H GPV+ + FHPN +L+A+ +
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 132 KIKIWDLRKYEVLQTLTG 149
I+ WDL K++V+ + G
Sbjct: 212 TIRFWDLEKFQVVSCIEG 229
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS+L +G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTAWK------LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 149 GHAKTLDF----SQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ + + L+ G+ S + + D + MG+ I + F PY
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA----NICSLDFHPY 116
Query: 205 EDVLGIG 211
+ + G
Sbjct: 117 GEFVASG 123
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 23/136 (16%)
Query: 58 SSGRYMAVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAF 117
+SGR +A G D RVN +W ++ + H PV ++
Sbjct: 31 ASGRLLATGG---DDCRVN----------------LWSINKPNCIMSLTGHTSPVESVRL 71
Query: 118 HPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG-LLAVGTGSFAQIL 173
+ L+ + I++WDL ++L+TL GH +LDF G +A G+ L
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 174 GDFSGSHNYSRYMGNS 189
D RY G+S
Sbjct: 132 WDIRRKGCVFRYRGHS 147
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + M++ G + + +R+N ++ G G++ +W + +L ++ H+
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA---KTLDFSQKG-LLAVGT 166
+ +L FHP G +A+ ++ IK+WD+R+ + GH+ + L FS G LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
L D + S + G++ + V F P E +L G S
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHT----GPVNVVEFHPNEYLLASGSS 209
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
+R +P ++ TV +W T ++ + H GPV+ + FHPN +L+A+ +
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 132 KIKIWDLRKYEVLQTLTG 149
I+ WDL K++V+ + G
Sbjct: 212 TIRFWDLEKFQVVSCIEG 229
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS+L +G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTAWK------LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 149 GHAKTLDF----SQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ + + L+ G+ S + + D + MG+ I + F PY
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA----NICSLDFHPY 116
Query: 205 EDVLGIG 211
+ + G
Sbjct: 117 GEFVASG 123
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 23/136 (16%)
Query: 58 SSGRYMAVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAF 117
+SGR +A G D RVN +W ++ + H PV ++
Sbjct: 31 ASGRLLATGG---DDCRVN----------------LWSINKPNCIMSLTGHTSPVESVRL 71
Query: 118 HPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG-LLAVGTGSFAQIL 173
+ L+ + I++WDL ++L+TL GH +LDF G +A G+ L
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 174 GDFSGSHNYSRYMGNS 189
D RY G+S
Sbjct: 132 WDIRRKGCVFRYRGHS 147
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + SS + G + + V NP ++ G S TV +W+ +S L H
Sbjct: 1184 LWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTS 1243
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKG-LLAVGT 166
V+++ F+P+G ++A+ + +++WD+ + L T GH ++ F+ G +LA G+
Sbjct: 1244 WVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGS 1303
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
G L + S S + G++ + V+F P +L G
Sbjct: 1304 GDQTVRLWEISSSKCLHTFQGHTS----WVSSVTFSPDGTMLASG 1344
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P +++ G TV +W ++ L + H V ++ F P+G L+A+ + +++
Sbjct: 1377 SPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRL 1436
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGS 168
W++ E L TL GH +++ FS GL+ + +GS
Sbjct: 1437 WNISSGECLYTLHGHINSVRSVAFSSDGLI-LASGS 1471
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + SS G + V NP +++ G TV +W+ ++S L H
Sbjct: 1268 LWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTS 1327
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG-LLAVGT 166
VS++ F P+G ++A+ + +++W + E L T GH ++ FS G +LA G+
Sbjct: 1328 WVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGS 1387
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQ--IGKVSFRPYEDVLGIG 211
G Q + +S S Y ++G+ +G + F P +L G
Sbjct: 1388 GD--QTVRLWSISSGKCLY----TLQGHNNWVGSIVFSPDGTLLASG 1428
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFN---GVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + SS + G T +R F+ +++ G TV +W ++ L + H
Sbjct: 1016 LWDISSSQCFYIFQGH-TSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHT 1074
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGT 166
V ++ F P+G ++A+ G + +++WD+ L TL G+ + L FS G + +
Sbjct: 1075 SCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNG-VTLAN 1133
Query: 167 GSFAQIL 173
GS QI+
Sbjct: 1134 GSSDQIV 1140
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ G TV +W ++S L + H V+++ F+P+G +A+ + +++
Sbjct: 1167 SPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRL 1226
Query: 136 WDLRKYEVLQTLTGHAKTLD---FSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMV 191
W++ + L T GH ++ F+ G +LA G+ L D S S + G++
Sbjct: 1227 WEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHT-- 1284
Query: 192 KGYQIGKVSFRPYEDVLGIG 211
+ V+F P +L G
Sbjct: 1285 --NWVNSVAFNPDGSMLASG 1302
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 22/185 (11%)
Query: 11 KKYLRGEDFKRQKLKGQLPLREELYGKSAKAAAKVEKNLVHILW--ILPSSGRYMAVAGR 68
K L G D + G + S + E NL + ++ IL G + VA
Sbjct: 822 KMVLEGRDLSHTVIIGA-----DFTNTSLRCVNFTEANLAYSVFTKIL---GSVLTVA-- 871
Query: 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG 128
+P + + G SGG V W+ T L+ H V+++ F +G ++A+
Sbjct: 872 ------FSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS 925
Query: 129 KECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGL-LAVGTGSFAQILGDFSGSHNYSR 184
+ +++WD+ + L+T GH +++ FS L LA G+ L D S
Sbjct: 926 DDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYI 985
Query: 185 YMGNS 189
+ G++
Sbjct: 986 FQGHT 990
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPF--NGV-VSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + SSG + T +R F NGV ++ G S V +W ++ L + H
Sbjct: 1100 LWDI-SSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHT 1158
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKG-LLAVG 165
V+A+AF P+G +A+ + +++WD+ + L L GH ++ F+ G LA G
Sbjct: 1159 NWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASG 1218
Query: 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
+ L + + S + G++ + V F P +L G S
Sbjct: 1219 SSDQTVRLWEINSSKCLCTFQGHTS----WVNSVVFNPDGSMLASGSS 1262
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFNGVVSLGHSGG---TVTMWKPTTSALLIKMLYHQ 109
LW + SSG + T +R F+ ++ SGG V +W ++ L + +
Sbjct: 1058 LWDI-SSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYT 1116
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKG-LLAVG 165
V L F PNG +A + +++WD+ + L TL GH ++ FS G LA G
Sbjct: 1117 SWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASG 1176
Query: 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
+G L D S S G++ + V F P L G S
Sbjct: 1177 SGDQTVRLWDISSSKCLYILQGHTS----WVNSVVFNPDGSTLASGSS 1220
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 53 LWILPSSGRYMAVAGRRTDLMR---VNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + SSG+ + T +R +P + +++ G S TV +W ++ L H
Sbjct: 932 LWDI-SSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHT 990
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKG-LLAVG 165
G V ++AF+ +G ++AT + +++WD+ + GH +++ FS G +LA G
Sbjct: 991 GWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASG 1050
Query: 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
+ L D S + G++ + V F P +L G
Sbjct: 1051 SDDQTVRLWDISSGNCLYTLQGHTSC----VRSVVFSPDGAMLASG 1092
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P +++ G TV +W ++ L + H V ++AF +G ++A+ + IK+
Sbjct: 1419 SPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKL 1478
Query: 136 WDLRKYEVLQTL 147
WD++ E ++TL
Sbjct: 1479 WDVKTGECIKTL 1490
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKG-LLAVG 165
G V +AF P+G L AT ++ W+ + L T GH ++ FSQ G +LA G
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924
Query: 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
+ L D S + G++ ++ V F P +L G S
Sbjct: 925 SDDQTVRLWDISSGQCLKTFKGHTS----RVRSVVFSPNSLMLASGSS 968
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + ++ S TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 195 HPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL---GDFSGSHNYSRYM 186
DL + +L TL GH A + FS+ G GS Q++ +F S +YSR +
Sbjct: 255 LDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFD-SVDYSRVL 310
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W ++ L+ G S + FHP+ +AT + +++WD+R + +LQ
Sbjct: 167 TVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQV 226
Query: 150 HA---KTLDFSQKG--LLAVGTGSFAQILGDFSG 178
H+ L F G LL + S +IL G
Sbjct: 227 HSAAVNALSFHPSGNHLLTASSDSTLKILDLLEG 260
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 15/167 (8%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVT 92
+ S K A + ++W + R G + + V +P +++ TV
Sbjct: 26 FSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVR 85
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH-- 150
+W P+ + H G V ++ F +G + T + IK+W + + +++ TL H
Sbjct: 86 LWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNN 145
Query: 151 -AKTLDFSQKGLLAVGT----------GSFAQILGDFSGSHNYSRYM 186
+ FS G L V S Q++ F YS Y+
Sbjct: 146 WVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYV 192
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ G G V W+ + LL ++ H GPV F P+GHL A+ +C +++
Sbjct: 30 SPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRL 89
Query: 136 WDLRKYEVLQTLTGHAKTLD 155
WD+ + + L+ L GH ++++
Sbjct: 90 WDVARAKCLRVLKGHQRSVE 109
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 79 NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDL 138
+G+++ G T+ +WKPTTS+LLI++ H V ++AF P+ +A+ G +K+WD
Sbjct: 203 SGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC 262
Query: 139 RKYEVLQTLTG---HAKTLDFSQKGLLAV 164
+ L+TL G A T F+ G + V
Sbjct: 263 NTGKCLETLKGVLDVAHTCAFTPDGKILV 291
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
R +P + + TV +W + L + HQ V ++F P+ +A+ G +
Sbjct: 68 FCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK 127
Query: 132 KIKIWDLRKYEVLQTLTGHAKTL---DFSQKGLLAVGTGSF 169
++ +WD++ ++L+ L GH ++ DFS + + TGS+
Sbjct: 128 RVMLWDVQSGQMLRLLVGHRDSIQSSDFSPT-VNCLATGSW 167
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 91 VTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLR------KYEVL 144
V +W + +L ++ H+ + + F P + +AT + + IWDLR ++ L
Sbjct: 129 VMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQAL 188
Query: 145 QTLTGHAKTLDFSQKGLLAVGT 166
+ + + L +S GLLA G+
Sbjct: 189 EGHSANISCLCYSASGLLASGS 210
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAV 164
H G V++ AF P+G ++ T ++ + W+ R ++L L GH K FS G L
Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHL-- 77
Query: 165 GTGSFAQILGDFSGS-HNYSRYMGNSMVKGYQ--IGKVSFRPYEDVLGIGHSMGW 216
FA D + + +R ++KG+Q + VSF P L G GW
Sbjct: 78 ----FASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASG---GW 125
>sp|B7FNU7|LIS1_PHATC Lissencephaly-1 homolog OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=PHATRDRAFT_17300 PE=3 SV=1
Length = 439
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
+RV+P VV G G+V +W + + + H V+ LAF P G +A+ +
Sbjct: 134 CVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPTGSHLASCSTDL 193
Query: 132 KIKIWDLRKYEVLQTLTGHAKTL 154
IK+WD + Y ++TL GH T+
Sbjct: 194 SIKLWDFQTYACIKTLRGHDHTI 216
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147
TV +WK + ++ L+ + H V ++ HPNG+ + ++ + I+++D++ L+TL
Sbjct: 347 TVRLWKVSEASCLMVLKAHDNWVRSVLIHPNGNYILSSSDDKSIRVFDIKNERCLRTL 404
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKGLLAVGTG 167
H V+ + HP ++ + ++ +K+WD E ++TL GH T++ GL TG
Sbjct: 128 HSSVVTCVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVN----GLAFTPTG 183
Query: 168 S-FAQILGDFSGS-HNYSRYMGNSMVKGYQ--IGKVSFRPY 204
S A D S ++ Y ++G+ I V F P+
Sbjct: 184 SHLASCSTDLSIKLWDFQTYACIKTLRGHDHTISSVVFLPF 224
Score = 35.0 bits (79), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHP-NGHLMATT--------GKECKIKIWDLRK 140
++ +W T A + + H +S++ F P G L+ TT ++C +K+WDL
Sbjct: 194 SIKLWDFQTYACIKTLRGHDHTISSVVFLPFGGDLLTTTKCKRLLSASRDCTVKVWDLET 253
Query: 141 YEVLQTLTGH 150
QT+ H
Sbjct: 254 GFCDQTIHDH 263
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW S+ G +D+ ++ +P + V+ G S TV +W T + M H+G
Sbjct: 518 LWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKG 577
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTG 167
VS+LAF G +A+ + I IWDL ++ TL H T+ FS+ G + G
Sbjct: 578 SVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAG 637
Query: 168 --------SFAQILGDFSGSH 180
F ++ D+ +H
Sbjct: 638 LDNNLTLWDFHKVTEDYISNH 658
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T +W ++ L + H V + FHPN + +AT + +++WD + ++ +TG
Sbjct: 515 TARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG 574
Query: 150 H---AKTLDFSQKG-LLAVGTGSFAQILGDFSG 178
H +L FS G LA G+ I+ D S
Sbjct: 575 HKGSVSSLAFSACGRYLASGSVDHNIIIWDLSN 607
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA 151
++ H GPV AF P +L+ + ++ I++W L + + T GH
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHV 492
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T+ +W T + ++ H PV + F P+G+ + + ++W + L+
Sbjct: 472 STIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV 531
Query: 149 GHAKTLDFSQ 158
GH +D Q
Sbjct: 532 GHLSDVDCVQ 541
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
D ++ +P + ++ G + TV +W + H+GPV +LAF PNG +A+ G++
Sbjct: 430 DCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGED 489
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFS-QKGLLAVGT 166
++K+WDL + + L GH +L FS GL+A +
Sbjct: 490 QRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASAS 529
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+ ++P++ + G T +W + L H V + FHPN + +AT +
Sbjct: 390 LDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 133 IKIWDLRKYEVLQTLTGH---AKTLDFSQKG 160
+++W ++ ++ TGH +L FS G
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK 152
+W + L ++ H +++L F P+ L+A+ + +++WD+R T +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN-------TYCSA 546
Query: 153 TLDFSQKGLLAVGTGSFAQILG 174
D S L+ V TG + +L
Sbjct: 547 PADGSSSELVGVYTGQMSNVLS 568
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 94 WKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK- 152
W P A + + H+ P++++AFHP ++A+ ++ +KIWD E +TL GH K
Sbjct: 94 WLPRAPAAHV-LTGHRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTKP 152
Query: 153 --TLDFSQKGLLAVGTGS--FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVL 208
LDF KG L V S F +I + N ++G+ + + V F P + ++
Sbjct: 153 VNDLDFDHKGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHD----HAVSAVRFMPGDQLI 208
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 30 LREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHS 87
L+EEL A+ AA W LP + + G R L + +P +++
Sbjct: 76 LQEELSMSPARRAASQAD------W-LPRAPAAHVLTGHRAPLTSIAFHPQYSILASASE 128
Query: 88 GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLR-KYEVLQT 146
TV +W T + H PV+ L F GHL+ T + IKIWD + +++ +T
Sbjct: 129 DTTVKIWDWETGEFERTLKGHTKPVNDLDFDHKGHLLVTCSSDLFIKIWDSQNEWKNTKT 188
Query: 147 LTGH 150
GH
Sbjct: 189 FVGH 192
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W T ++ + H V ALAFHP+G + ++ + +++W+L L+ +
Sbjct: 320 TVKLWDTQTGQMIRNLAGHDNWVRALAFHPSGKYLLSSSDDKTVRVWELSTGRCLRIVEA 379
Query: 150 HA 151
H+
Sbjct: 380 HS 381
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 20/90 (22%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHP--------------------N 120
+++ G TV +W P T ++ H+ V A+AF P +
Sbjct: 249 MLASGSKDQTVRLWDPLTGEPKSELRGHENDVEAVAFAPISAYAAIRELAGIPNDRTKRH 308
Query: 121 GHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
G +A+ ++ +K+WD + ++++ L GH
Sbjct: 309 GLFLASGARDKTVKLWDTQTGQMIRNLAGH 338
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK 152
H VSA+ F P L+ + ++ I+++D+ ++TL+GH++
Sbjct: 192 HDHAVSAVRFMPGDQLIVSASRDRTIRVFDVASTHQVRTLSGHSE 236
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
D ++ +P + ++ G + TV +W + H+GPV +L+F PNG +A+ G++
Sbjct: 430 DCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGED 489
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFS-QKGLLA 163
++K+WDL + + L GH +L FS GL+A
Sbjct: 490 QRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 526
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+ ++PF+ + G T +W + L H V + FHPN + +AT +
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 133 IKIWDLRKYEVLQTLTGH---AKTLDFSQKG 160
+++W ++ ++ TGH +L FS G
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG 480
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK 152
+W + L ++ H +++LAF P+ L+A+ + +++WD+R T
Sbjct: 494 LWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS-------TCCNT 546
Query: 153 TLDFSQKGLLAVGTGSFAQILG 174
D S L+ V TG + +L
Sbjct: 547 PADGSSGELVGVYTGQMSNVLS 568
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 58 SSGRYMAVAGR--RTDLMRVNPFNGVVSL-GHS--------------------GGTVTMW 94
S+GR +A G R ++ VN N V+SL GH+ G++ +W
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 95 KPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---A 151
+ +L +L H+ + +L FHP G +A+ + IK+WD+R+ + H
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV 150
Query: 152 KTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGI 210
+ L FS G LA L D + + G+S + V F P E +L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHS----GPVNVVEFHPSEYLLAS 206
Query: 211 GHS 213
G S
Sbjct: 207 GSS 209
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
+R +P ++ TV +W T ++ + H GPV+ + FHP+ +L+A+ +
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDR 211
Query: 132 KIKIWDLRKYEVLQTLTGHA---KTLDFSQKGLLAVG 165
I+ WDL K+ V+ + A + + F+ G G
Sbjct: 212 TIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYG 248
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS+L G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTAWK------LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT 60
Query: 149 GHAKTLDFSQ----KGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ Q + L+ G+ S + + D + +G+ I + F PY
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA----NICSLDFHPY 116
Query: 205 EDVLGIG 211
+ G
Sbjct: 117 GSFVASG 123
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + NP ++ S TV +W + LL H G V+ ++FHP+G+ + T +
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSD 249
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
+KI DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 52 ILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
+LW R G + + V +P +++ TV +W P + H
Sbjct: 43 MLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 102
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGT 166
PV ++ F +G +AT ++ IK+W + + L +L H + FS G L V
Sbjct: 103 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 162
Query: 167 G----------SFAQILGDFSGSHNYSRYM 186
+ Q + +FS S ++ ++
Sbjct: 163 SEDKTIKIWDTTNKQCVNNFSDSVGFANFV 192
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 20/179 (11%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFNG---VVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LWI G++ + V+ F+ ++ ++ +W L + H
Sbjct: 86 LWIPDKRGKFSEFKAHTAPVRSVD-FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHT 144
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKGLLAVGT 166
V F P+G L+ + ++ IKIWD + + + G A +DF+ G
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASA 204
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQ-----IGKVSFRPYEDVLGIGHSMGWSGIL 220
GS + N +++ YQ + +SF P + L S G IL
Sbjct: 205 GSDQTV--------KVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKIL 255
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 59 SGRYMAVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFH 118
SG AVA ++ +P +++ G + TV +W T A + + H VS +A++
Sbjct: 37 SGHTKAVAA-----VKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWN 91
Query: 119 PNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
PNG +AT + +K+WD L+TLTGH +F + +GSF + L
Sbjct: 92 PNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETL 149
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + R +AG + V NP ++ ++ +W T A L + H
Sbjct: 66 LWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTN 125
Query: 111 PVSALAFH-PNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKGLLAV 164
V F GHL+A+ + +++WD+R L+ + H+ + FS G + V
Sbjct: 126 YVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVV 183
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147
T+ +W + L ++ H PV++ AF +G ++ T+ + I++WD + L+TL
Sbjct: 148 TLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTL 205
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W T+ + H G V+ + FHP+G +A G + +K+WD R + +LQ
Sbjct: 168 TVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQL 227
Query: 150 HA---KTLDFSQKG--LLAVGTGSFAQILGDFSG 178
H+ L F G L+ + S +IL G
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 52 ILWILPSSGRYMAVAGRRTDLMRVN--PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
++W + R G + + VN P +++ G TV +W P H
Sbjct: 44 MIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 103
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAV 164
V ++ F +G + T + +K+W + L +LT H + FS G L V
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIV 161
Score = 35.0 bits (79), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W L + H V F P+G L+ + + +K+WD E + +
Sbjct: 126 TVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE 185
Query: 150 H---AKTLDFSQKGLLAVGTG 167
H +DF G G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAG 206
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIW 136
G T+ +W + + H+ V+ + F P+GHL+A+ ++ ++IW
Sbjct: 37 GSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+AL+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W T+ + H G V+ + FHP+G +A G + +K+WD+R + +LQ
Sbjct: 168 TVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 227
Query: 150 HA---KTLDFSQKG--LLAVGTGSFAQILGDFSG 178
H+ L F G L+ + S +IL G
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 261
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W L + H V F P+G L+ + + +K+WD E + +
Sbjct: 126 TVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 185
Query: 150 H---AKTLDFSQKGLLAVGTG 167
H +DF G G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAG 206
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 85 GHSGGTVTMW--KPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIW 136
G + +W KP T A + H+ V+ + F P+GHL+A+ ++ ++IW
Sbjct: 37 GSMDSCLMVWHMKPQTRAY--RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 66 AGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL 123
AG D+ R +P + V+ G + TV +W + H+GP+ +L F PNG
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 124 MATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
+AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 730
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
GTV +W T L+ H PV F P G+ + G + ++W Y+ L+
Sbjct: 565 GTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA 624
Query: 149 GHAKTLDFSQ----KGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ ++ +A G+ L D + + G+ KG I ++F P
Sbjct: 625 GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH---KG-PIHSLTFSPN 680
Query: 205 EDVLGIGHSMG 215
L G + G
Sbjct: 681 GRFLATGATDG 691
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 103 IKMLY-HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
+K+LY H GPV +F P+ + + ++ ++ +++W L+ + L GH
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 584
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 66 AGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL 123
AG D+ R +P + V+ G + TV +W + H+GP+ +L F PNG
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 124 MATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
+AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 731
Score = 38.5 bits (88), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
GTV +W T L+ H PV F P G+ + G + ++W Y+ L+
Sbjct: 566 GTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA 625
Query: 149 GHAKTLDFSQ----KGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ ++ +A G+ L D + + G+ KG I ++F P
Sbjct: 626 GHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH---KG-PIHSLTFSPN 681
Query: 205 EDVLGIGHSMG 215
L G + G
Sbjct: 682 GRFLATGATDG 692
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 103 IKMLY-HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
+K+LY H GPV +F P+ + + ++ ++ +++W L+ + L GH
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 585
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
Query: 50 VHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY 107
VH LW + M++ G T + +R N ++ G G++ +W + +L ++
Sbjct: 45 VH-LWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMG 103
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKG-LLA 163
H+ VS+L FHP G +A+ + IK+WD+R+ + GH + L FS G LA
Sbjct: 104 HKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLA 163
Query: 164 VGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213
+ + L D + + M + + F P E +L G +
Sbjct: 164 SASDDHSVKLWDLTA----GKMMAELSEHKGPVNIIEFHPNEYLLASGSA 209
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
+R +P ++ +V +W T ++ ++ H+GPV+ + FHPN +L+A+ +
Sbjct: 152 CLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADR 211
Query: 132 KIKIWDLRKYEVLQTLTGH---AKTLDFSQKG 160
++ WDL K++++ G + + FS G
Sbjct: 212 TVRFWDLEKFQLVGCTEGETIPVRAILFSNDG 243
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS++ +G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTTWK------LQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLT 60
Query: 149 GHAKTLDF----SQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ + + L+ G+ S + + D + MG+ + + F PY
Sbjct: 61 GHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKA----NVSSLDFHPY 116
Query: 205 EDVLGIG 211
+ + G
Sbjct: 117 GEFVASG 123
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
+V+ G V +W ++ + H PV ++ F+ + L+ + ++IWDL
Sbjct: 35 LVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEA 94
Query: 141 YEVLQTLTGH---AKTLDFSQKGLLAVGTGSF 169
++L+TL GH +LDF G V +GS
Sbjct: 95 AKILRTLMGHKANVSSLDFHPYGEF-VASGSL 125
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + NP ++ S TV +W + LL H G V+ ++FHP+ + + T +
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSD 249
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
+KI DL + ++ TL GH T+ FS+ G L G+ Q+L
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 44/213 (20%)
Query: 52 ILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
+LW R G + + V +P +++ TV +W P + H
Sbjct: 43 MLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 102
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGT 166
PV ++ F +G +AT ++ IK+W + + L +L H + FS G L V
Sbjct: 103 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 162
Query: 167 G----------SFAQILGDFSGSHNYSRYMG------------------------NSMVK 192
+ Q + +FS S ++ ++ N +++
Sbjct: 163 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Query: 193 GYQ-----IGKVSFRPYEDVLGIGHSMGWSGIL 220
YQ + +SF P ++ L S G IL
Sbjct: 223 HYQVHSGGVNCISFHPSDNYLVTASSDGTLKIL 255
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + +P + + S GT+ + L+ + H GPV ++F G L A+ G +
Sbjct: 232 NCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Query: 131 CKIKIW 136
++ +W
Sbjct: 292 TQVLLW 297
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
G V +W + LL ++ H+GPV + F P+G L+A++ + I++WD+ + + L L
Sbjct: 48 GCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLK 107
Query: 149 GHAKTLD 155
GH ++++
Sbjct: 108 GHQRSVE 114
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 79 NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDL 138
+G+++ G T+ +WKPTT+ L +++ H V++LAF P+ +A+ G +K+WD
Sbjct: 208 SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDC 267
Query: 139 RKYEVLQTLTGH---AKTLDFSQKGLLAV 164
+ L+TL G A F+ G L V
Sbjct: 268 LTGKCLETLKGMLDVAHACIFTPDGKLLV 296
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAV 164
H G V+ AF P+G + T + + +W + +L L GH K+ FS G L
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 165 GTGSFAQI-LGDFSGSHNYSRYMGNSMVKGYQ--IGKVSFRPYEDVLGIGHSMGW 216
+ S I L D +R ++KG+Q + VSF P L G GW
Sbjct: 85 SSSSDHSIRLWDV------ARSKCLHVLKGHQRSVETVSFSPDSKQLASG---GW 130
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLR------KYEVLQTLTGHAKTLDFSQ 158
++ H + + F P +AT + + IWDLR Y L+ TG+ L +S
Sbjct: 148 LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA 207
Query: 159 KGLLAVGT 166
GLLA G+
Sbjct: 208 SGLLASGS 215
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL + KS + + +W S + G R + + NP+ ++
Sbjct: 93 LPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + LAF+P L+AT + K+WD++ E
Sbjct: 153 GSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEA 212
Query: 145 QTLTGHAK---TLDFSQKGLLAVGTGSF 169
TL+GHA +L F+ G + TGSF
Sbjct: 213 LTLSGHAAEIISLSFNTTGDRLI-TGSF 239
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFNGV---VSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + S + ++G +++ ++ FN + G TV++W+ + + ++ H+
Sbjct: 203 LWDIQSGEEALTLSGHAAEIISLS-FNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHR 261
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
G +S+ F+ + L+AT + K+WD + + TLTGH
Sbjct: 262 GEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGH 302
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 25 KGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVV 82
+G++ + + S A A ++K+ LW + + G +++ V + +V
Sbjct: 261 RGEISSAQFNWDCSLIATASMDKSCK--LWDSLNGKCVATLTGHEDEVLDVTFDSTGQLV 318
Query: 83 SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE 142
+ + GT ++ ++ L K+ H+G +S + F+ G+ + T + ++W+ E
Sbjct: 319 ATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGE 378
Query: 143 VLQTLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKG 193
LQ L GH + FS + NY GN+++ G
Sbjct: 379 CLQVLKGHTDEI---------------------FSCAFNYE---GNTIITG 405
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + Y G +++ + NP + +++ G T +W + + + H
Sbjct: 161 LWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAA 220
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
+ +L+F+ G + T + + +W++ + TL GH
Sbjct: 221 EIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGH 260
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 102 LIKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFS 157
L K+L H P++ +AF+ +G T + K+WD E L TL GH + F+
Sbjct: 84 LFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFN 143
Query: 158 QKGLLAVGTGSFAQILGDFSGSHN--YSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
+ TGSF + +S Y + G++ +I ++F P ++ G
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTA----EIVCLAFNPQSTLIATG 195
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 5 ELDTKVKKYLRGEDFKRQKLKGQLPLREELYGKS---AKAAAKVEKNLVHILWI----LP 57
+L+ + +YL +D ++ L R L KS +K A +EK V ++ + +
Sbjct: 11 DLNKSIAEYLYAQDL--TEIADSLCARLSLDYKSEPNSKYAGLLEKKWVSVIRLQKKLIE 68
Query: 58 SSGRYMAV-------AGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
S RY A+ RR D +V+ W PT A + H+
Sbjct: 69 SENRYTALQEDIAAGPARRRD-AQVD-----------------WLPTAPARY-TLTSHRA 109
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P++ +AFHP L+A+ ++ +KIWD +TL GH + +DF KG LA +
Sbjct: 110 PITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGVDFDSKGSFLATCS 169
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQ--IGKVSFRPYEDVLG 209
+ + D N + Y G ++ +G++ + V F P +D++
Sbjct: 170 SDLSIKVWDTQQWDN-AGYSGKTL-RGHEHTVSTVKFLPGDDLIA 212
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
H+ VS + F P L+A+ ++ I+IW++ ++T+TGH
Sbjct: 195 HEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRTITGH 237
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 19/83 (22%)
Query: 87 SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHP-------------------NGHLMATT 127
S T +W PT+ + ++ H V +AF P G +AT
Sbjct: 258 SDNTARVWDPTSGVMKMEFRGHGHIVEVIAFAPLASYAAIRELAGLKAATKAPGAYIATG 317
Query: 128 GKECKIKIWDLRKYEVLQTLTGH 150
++ +KIWD+ + L+T++GH
Sbjct: 318 SRDKTVKIWDVHSGQELRTVSGH 340
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 82 VSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKY 141
++ G TV +W + L + H + L FHP+G + + + I++W+L
Sbjct: 314 IATGSRDKTVKIWDVHSGQELRTVSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTG 373
Query: 142 EVLQTLTGHA 151
+ + H+
Sbjct: 374 RCMXVVEAHS 383
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 58 SSGRYMAVAGR--RTDLMRVNPFNGVVSL-GHSG--------------------GTVTMW 94
SSGR +A G R ++ V+ N ++SL GH+ G++ +W
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLW 90
Query: 95 KPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---A 151
+ +L ++ H+ +S+L FHP G +A+ + IK+WD+R+ + GH
Sbjct: 91 DLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAV 150
Query: 152 KTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGI 210
+ L FS G LA + L D + + ++ + V F P E +L
Sbjct: 151 RCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA----VNVVQFHPNEYLLAS 206
Query: 211 GHS 213
G +
Sbjct: 207 GSA 209
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-- 147
TV +W ++ + H V+ + FHPN +L+A+ + +K+WDL K+ ++ +
Sbjct: 170 TVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEG 229
Query: 148 -TGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED 206
TG +++ F+ G +SGS N R G + + + V + D
Sbjct: 230 ETGVVRSVLFNPDGSCL------------YSGSENTLRVYGWEPDRCFDVVHVGWGKVSD 277
Query: 207 VLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREKEVHSLLDKLLLETIMLNPSK 266
L I ++ ++ S N +V + R K+ S++ L+ + + PS
Sbjct: 278 -LAISNNQ----MIAVSYSHTNVSWYVVD------LNRVKKSGSVIQGLIQDKPIPAPSS 326
Query: 267 IGTVREAKKKEKPTKQGREAEMEAAVEA 294
+ E+PT EM+ + EA
Sbjct: 327 ALGTTLRRNYERPTTSCTGQEMKQSSEA 354
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T+ MW +T L+ ++ H V + FHP G + T + ++IWD + +
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVTCADDKTLRIWDYKNKRCM 373
Query: 145 QTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
+TL H +LDF K V TGS Q +
Sbjct: 374 KTLCAHEHFVTSLDF-HKAAPYVVTGSVDQTV 404
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI RY A++G R+ + RV +P V+ T+ +W T + H
Sbjct: 94 WIPRPPERY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDLTGKLLASCSADMTIKLWDFQSFECIRTMHGH 191
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLA 163
H+ PV+ + FHP +M + ++ IK+WD + +TL GH + + F G LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLA 166
Query: 164 VGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED 206
+ L DF G+ + + V+ P D
Sbjct: 167 SCSADMTIKLWDFQSFECIRTMHGHD----HNVSSVAIMPNGD 205
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W + + M H VS++A PNG + + ++ +K+W++ ++T TG
Sbjct: 173 TIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTG 232
Query: 150 H 150
H
Sbjct: 233 H 233
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 59 SGRYMAVAGRRTDLM---RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSAL 115
+G+Y++ TD + +P + ++ + +V +W +T +L H V A+
Sbjct: 967 TGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAV 1026
Query: 116 AFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTL 154
FHP G ++AT +C +K+W++ + L+TL+ H+ +
Sbjct: 1027 VFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKI 1065
Score = 49.7 bits (117), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 91 VTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V +W + + H+ V ++AFHP+G +A+ + IK+WD++ LQTLTGH
Sbjct: 708 VKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGH 767
Query: 151 A---KTLDFSQKG 160
+ + FS G
Sbjct: 768 TDWVRCVAFSPDG 780
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-- 147
T+ +W L + H V +AF P+G+ +A++ + IK+WD+ + + L+TL
Sbjct: 749 TIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKS 808
Query: 148 -TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNS 189
TG +++ FS G LA G+G + ++ Y+G++
Sbjct: 809 HTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHT 852
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 53 LWILPSSGRYMAVAGRRTDL---MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + S+G+ + +D M +P +++ + +V +W T + + H
Sbjct: 1046 LWNI-STGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHS 1104
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V + F PNG ++AT + +KIWD ++ + L+TLTGH
Sbjct: 1105 NRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGH 1145
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 91 VTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V +W+ + LL+ H V + F P+G ++A+ G + +K+W +R ++TLTGH
Sbjct: 666 VRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGH 725
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + S+G+ + TD + +P +++ G + TV +W +T L + H
Sbjct: 1004 LWNI-STGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHS 1062
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA 151
+ +A+ P+G L+A+ + +++WD + L GH+
Sbjct: 1063 DKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHS 1104
Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W + L + H G V ++AF +G +A+ + IKIW+ E L+T G
Sbjct: 791 TIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIG 850
Query: 150 HAKTL 154
H ++
Sbjct: 851 HTNSV 855
Score = 40.4 bits (93), Expect = 0.022, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFNG---VVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + S G+ + T +R F+ ++ G T+ +W T L + H
Sbjct: 794 LWDV-SQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHT 852
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKG 160
V ++A+ P+ ++ + + IK+WD + + ++TL GH ++ FS G
Sbjct: 853 NSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDG 906
Score = 38.9 bits (89), Expect = 0.058, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDF 156
G + + AF P G L+AT +C +++W+++ ++L GH+ + F
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRF 689
Score = 38.5 bits (88), Expect = 0.078, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147
TV +W T + H VS++AF P+G ++A+ ++ ++IW+++ E LQ L
Sbjct: 1169 TVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQIL 1226
Score = 36.6 bits (83), Expect = 0.31, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P +++ G + TV +W T + + H + +AF P+ +A+ + +++
Sbjct: 945 SPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRL 1004
Query: 136 WDLRKYEVLQTLTGH 150
W++ + Q L H
Sbjct: 1005 WNISTGQCFQILLEH 1019
Score = 36.2 bits (82), Expect = 0.42, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P + ++ G T+ +W T + + H V ++AF P+G +A + +++
Sbjct: 861 SPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRL 920
Query: 136 WDLRKYEVLQTLTGH---AKTLDFS-QKGLLAVGTGSFAQILGDFSGSHNYSRYMGNS 189
W+ R + L+ G+ A + FS + +LA G+ L D+ S G++
Sbjct: 921 WNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHT 978
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 29 PLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAG----RRTDLMRVNPFNGVVSL 84
PL + + K A + V LW +P +AV R TD++ +P + ++
Sbjct: 257 PLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVV-FSPVDDCLAT 315
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
+ T +WK T LL H ++ +AFHP+G + TT + ++WD+ L
Sbjct: 316 ASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Query: 145 QTLTGHAKT---LDFSQKGLLAVGTG 167
GH+++ + F Q G LA G
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCG 400
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA 151
+W T ++ H PV ++ F PNG+ +A+ G++ + +IWDLR + L + HA
Sbjct: 407 VWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHA 465
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK 152
+W T A L+ H V +AF +G L A+ G + ++WDLR + GH K
Sbjct: 365 LWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424
Query: 153 ---TLDFSQKG 160
+++FS G
Sbjct: 425 PVFSVNFSPNG 435
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVN--PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W L + + G + VN P ++ G +W L + H
Sbjct: 407 VWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHAN 466
Query: 111 PVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
VS + + P G+ +AT + K+ IW R + ++++L GH
Sbjct: 467 LVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGH 507
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 67 GRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMAT 126
G + + +P ++ + TV +W + L+ H G V++L+FHP+G+ + T
Sbjct: 186 GGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLIT 245
Query: 127 TGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
+ +K+ DL + +L TL GH ++ FS++G GS Q++
Sbjct: 246 ASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSREGEFFASGGSDEQVM 295
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W T+ + H G V+ + FHP+G +A + +K+WD+R +++Q
Sbjct: 167 TIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQV 226
Query: 150 HA---KTLDFSQKG--LLAVGTGSFAQILGDFSG 178
H+ +L F G L+ S ++L G
Sbjct: 227 HSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEG 260
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 52 ILWILPSSGRYMAVAGRRTDLMRVN--PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
++W + R G + ++ V+ P +++ TV +W P+ H
Sbjct: 43 MIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHT 102
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAV 164
G V +++F +G + T + IK+W + + + L +L H + FS G L V
Sbjct: 103 GTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIV 160
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFNG---VVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW+ PS V T +R F+G + T+ +W L + H
Sbjct: 86 LWV-PSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHI 144
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDF 156
V F P+G L+ + + IK+WD E + + H ++F
Sbjct: 145 NWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNF 191
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 88 GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147
T+ +W LL + H+GPV L FHP + + G + IK+W L + L TL
Sbjct: 32 SSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTL 91
Query: 148 TGHAKTLDF 156
TGH LD+
Sbjct: 92 TGH---LDY 97
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
H V ++ FHP+ +L+ + G++ +++WDL K
Sbjct: 252 HTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDK 284
>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1
PE=2 SV=1
Length = 391
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+R P ++ + TV +W +A I+ H PV+ +A+ P G+L+A+ G +
Sbjct: 24 LRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRT 83
Query: 133 IKIWDLRKYEVLQTLTGHAK---TLDFSQKGLL 162
+KIW+ + V H+K ++DF G L
Sbjct: 84 VKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHL 116
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P+ ++++ + ++ + S LL + H PV+ +AFHP+GH + + + I+I
Sbjct: 195 HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Query: 136 WDLRKYEVLQTLTGHAKTLD---FSQKGLLAVGTGSFAQILGDFSGSHNY 182
DL + + TLTGH ++ FS+ G GS Q+L S H Y
Sbjct: 255 LDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTY 304
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 20/146 (13%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRVNPFNGVV---------SLG 85
+G A + ILW L + R + A P NGV S G
Sbjct: 26 FGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSA------PVNGVAWSPKGNLVASAG 79
Query: 86 HSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQ 145
H TV +W+P + + + H V ++ F GHLM T + KIW + + + +
Sbjct: 80 HDR-TVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVS 138
Query: 146 TLTGH---AKTLDFSQKGLLAVGTGS 168
+ ++ FS G L V T S
Sbjct: 139 SFAQQNNWVRSAKFSPNGKL-VATAS 163
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---G 149
+W+ + V + F PNG L+AT + ++I+D+ E ++T T
Sbjct: 128 IWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERA 187
Query: 150 HAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP 203
+ L + G +LAV G + D SGS Y +V + V+F P
Sbjct: 188 APRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLY----VVHSAPVNDVAFHP 238
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL + KS + +W S + G R + + NP+ V+
Sbjct: 93 LPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + LAF+P L+AT + K+WD+ E +
Sbjct: 153 GSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEV 212
Query: 145 QTLTGHAK---TLDFSQKGLLAVGTGSF 169
TL GH +L F+ G V TGSF
Sbjct: 213 STLAGHFAEIISLCFNTTGDRLV-TGSF 239
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + S +AG +++ + N + G T +W + + + H+G
Sbjct: 203 LWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRG 262
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
+S + F+ + L+AT + K+WD + L TL GH
Sbjct: 263 EISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH 302
Score = 35.0 bits (79), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/132 (18%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 25 KGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVV 82
+G++ + + S A A ++K+ +W + G +++ V N ++
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCK--VWDAEGGQCLATLLGHNDEVLDVCFNYTGQLI 318
Query: 83 SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE 142
+ + GT ++ T L ++ H+G +S + F+ G + T + ++W ++
Sbjct: 319 ATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGA 378
Query: 143 VLQTLTGHAKTL 154
LQ L GH+ +
Sbjct: 379 CLQVLEGHSDEI 390
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAV 164
H P++ +AF+ +G T + KIWD E L TL GH + F+ V
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKV 150
Query: 165 GTGSFAQILGDFSGSHNYSRYMGNSMVKGY--QIGKVSFRPYEDVLGIG 211
TGSF + +S Y +G+ +I ++F P ++ G
Sbjct: 151 ATGSFDKTCKLWSAETGKCFY----TFRGHTAEIVCLAFNPQSTLVATG 195
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 5 ELDTKVKKYLRGEDFKRQKLKGQLPLREELYGKS---AKAAAKVEKNLVHILWI----LP 57
+L+ + +YL +D ++ L R L KS +K A +EK V ++ + +
Sbjct: 11 DLNKSIAEYLYAQDL--TEIADSLCARLSLDYKSEPNSKYAGLLEKKWVSVIRLQKKLIE 68
Query: 58 SSGRYMAV-----AG--RRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
S RY A+ AG RR D +V+ W PT A + H+
Sbjct: 69 SENRYTALQEDIAAGPARRRD-AQVD-----------------WLPTAPARY-TLTSHRA 109
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGT 166
P++ +AFHP L+A+ ++ +KIWD +TL GH + +DF KG LA +
Sbjct: 110 PITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGVDFDSKGSFLATCS 169
Query: 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQ--IGKVSFRPYEDVLG 209
+ + D N + Y G ++ +G++ + V F P +D++
Sbjct: 170 SDLSIKVWDTQQWDN-AGYSGKTL-RGHEHTVSTVKFLPGDDLIA 212
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 19/83 (22%)
Query: 87 SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHP-------------------NGHLMATT 127
S T +W PT+ + ++ H V +AF P G +AT
Sbjct: 258 SDNTARVWDPTSGVMKMEFRGHGHIVEVIAFAPLASYAAIRELAGLKAATKAPGAYIATG 317
Query: 128 GKECKIKIWDLRKYEVLQTLTGH 150
++ +KIWD+ + L+TL+GH
Sbjct: 318 SRDKTVKIWDVHSGQELRTLSGH 340
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
H+ VS + F P L+A+ ++ I+IW++ ++ +TGH
Sbjct: 195 HEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRMITGH 237
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 82 VSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKY 141
++ G TV +W + L + H + L FHP+G + + + I++W+L
Sbjct: 314 IATGSRDKTVKIWDVHSGQELRTLSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTG 373
Query: 142 EVLQTLTGHA 151
++ + H+
Sbjct: 374 RCMKVVEAHS 383
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 67 GRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMAT 126
G + + +P ++ + TV +W + L+ H G V++L+FHP+G+ + T
Sbjct: 186 GGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLIT 245
Query: 127 TGKECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
+ +K+ DL + +L TL GH + FS++G GS Q++
Sbjct: 246 ASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSDEQVM 295
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W T+ + H G V+ + FHP+G +A + +K+WD+R +++Q
Sbjct: 167 TIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQV 226
Query: 150 HA---KTLDFSQKG--LLAVGTGSFAQILGDFSG 178
H+ +L F G L+ S ++L G
Sbjct: 227 HSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEG 260
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRVN--PFNGVVSLGHSGGTVT 92
+ + K A + ++W + + R G + ++ V+ P +++ TV
Sbjct: 26 FNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVR 85
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH-- 150
+W P+ H G V +++F +G + T + IK+W + + + L +L H
Sbjct: 86 LWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHIN 145
Query: 151 -AKTLDFSQKGLLAV 164
+ FS G L V
Sbjct: 146 WVRCAKFSPDGRLIV 160
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W L + H V F P+G L+ + + IK+WD E +Q+
Sbjct: 125 TIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCE 184
Query: 150 HAKTLDF 156
H ++F
Sbjct: 185 HGGFVNF 191
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 58 SSGRYMAVAGR--RTDLMRVNPFNGVVSL-GHS--------------------GGTVTMW 94
SSGR +A G R +L VN N ++SL GH+ G++ +W
Sbjct: 31 SSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVW 90
Query: 95 KPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---A 151
+ +L ++ H+ V +L FHP G +A+ + IK+WD+R+ + GH
Sbjct: 91 DLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAV 150
Query: 152 KTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGI 210
+ L FS G LA + + L D + + M + + F P E +L
Sbjct: 151 RCLRFSPDGKWLASASDDHSVKLWDLTA----GKMMAELSEHKGPVNIIEFHPNEYLLAS 206
Query: 211 GHS 213
G +
Sbjct: 207 GSA 209
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC 131
+R +P ++ +V +W T ++ ++ H+GPV+ + FHPN +L+A+ +
Sbjct: 152 CLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADR 211
Query: 132 KIKIWDLRKYEVLQTLTGH---AKTLDFSQKG 160
++ WDL K++++ G + + FS G
Sbjct: 212 TVRFWDLEKFQLIGCTEGETIPVRAILFSSDG 243
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAF-HPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148
T T WK L +++ H VS++ +G L+AT G +C++ +W + K + +LT
Sbjct: 7 TKTTWK------LQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLT 60
Query: 149 GHAKTLDF----SQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204
GH ++ + + L+ G+ S + + D + MG+ + + F PY
Sbjct: 61 GHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKA----NVCSLDFHPY 116
Query: 205 EDVLGIG 211
D + G
Sbjct: 117 GDFVASG 123
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVN--PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
+W L ++ + G + ++ ++ P+ V+ G + +W + + H
Sbjct: 89 VWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQ 148
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V L F P+G +A+ + +K+WDL +++ L+ H
Sbjct: 149 AVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEH 188
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
+P ++ TV +W T LL H V+ L+FHP+G+ + T + +KI
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
Query: 136 WDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
DL + +L TL GH A T+ FS+ G GS Q++
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W ++ + H G V+ + FHP+G +A G + +K+WD+R + +LQ
Sbjct: 168 TVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 227
Query: 150 HAKT---LDFSQKG--LLAVGTGSFAQILGDFSG 178
H+ L F G L+ + S +IL G
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
TV +W L + H V F P+G L+ + + +K+WD E + +
Sbjct: 126 TVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE 185
Query: 150 H---AKTLDFSQKGLLAVGTG 167
H +DF G G
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAG 206
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + +P ++ S V +W + LL H V+ L+FHP+G+ + T +
Sbjct: 190 NFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
+KI DL + ++ TL GH T+ FS+ G L G+ AQ+L
Sbjct: 250 GTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT- 148
++ +W L + H V F P+G L+ + ++ IKIWD + + +
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSD 184
Query: 149 --GHAKTLDFSQKGLLAVGTGS-FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE 205
G A +DFS G GS A + D +R + + V + +SF P
Sbjct: 185 SVGFANFVDFSPNGTCIASAGSDHAVRIWDI----RMNRLLQHYQVHSCGVNCLSFHPSG 240
Query: 206 DVLGIGHSMGWSGIL 220
+ L S G IL
Sbjct: 241 NSLVTASSDGTVKIL 255
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 15/170 (8%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
+ + K A + +LW L R G + + ++ +P +++ TV
Sbjct: 26 FSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVR 85
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH-- 150
+W + H PV ++ F +G + T ++ IK+W + + L +L H
Sbjct: 86 LWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTH 145
Query: 151 -AKTLDFSQKGLLAVGTG----------SFAQILGDFSGSHNYSRYMGNS 189
+ FS G L V + Q + +FS S ++ ++ S
Sbjct: 146 WVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFS 195
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + +P + S GTV + L+ + H GPV ++F +G L + G +
Sbjct: 232 NCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGAD 291
Query: 131 CKIKIW 136
++ +W
Sbjct: 292 AQVLVW 297
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 53 LWILPSSGRYMAVAGRRT--DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + +++ G + D + + +V+ G + GT+ +W + ++ + H+
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTG 167
++ FHP G A+ + +KIWD+RK + T GH + L F+ G V G
Sbjct: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGG 162
Query: 168 SFAQI-LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
+ + D + + + + QI + F P+E +L G
Sbjct: 163 EDNIVKVWDLTAGKLLTEFKSHE----GQIQSLDFHPHEFLLATG 203
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 41 AAAKVEKNLVHILWILPSSGRYMAVAG--RRTDLMRVNPFNGVVSLGHSGGTVTMWKPTT 98
A+ ++ NL +W + G G R +++R P V G V +W T
Sbjct: 117 ASGSLDTNLK--IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Query: 99 SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT---LTGHAKTLD 155
LL + H+G + +L FHP+ L+AT + +K WDL +E++ + T + L
Sbjct: 175 GKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLS 234
Query: 156 FSQKG 160
F+ G
Sbjct: 235 FNPDG 239
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 91 VTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V +W ++ + H + ++ F + L+A IK+WDL + ++++TLTGH
Sbjct: 41 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Query: 151 ---AKTLDF 156
++DF
Sbjct: 101 RSNCISVDF 109
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL + KS + + +W S + G R + + NP+ ++
Sbjct: 93 LPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + L F+P L+AT + K+WD++ E
Sbjct: 153 GSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEA 212
Query: 145 QTLTGHAK---TLDFSQKGLLAVGTGSF 169
TL+GHA +L F+ G + TGSF
Sbjct: 213 LTLSGHAAEIISLSFNTTGDRLI-TGSF 239
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRVNPFNGV---VSLGHSGGTVTMWKPTTSALLIKMLYHQ 109
LW + S + ++G +++ ++ FN + G TV++W+ + + ++ H+
Sbjct: 203 LWDIQSGEEALTLSGHAAEIISLS-FNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHR 261
Query: 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
G +S+ F+ + L+AT + K+WD + + TLTGH
Sbjct: 262 GEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGH 302
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 25 KGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVV 82
+G++ + + S A A ++K+ LW + + G +++ V + +V
Sbjct: 261 RGEISSAQFNWDCSLIATASMDKSCK--LWDSLNGKCVATLTGHDDEVLDVTFDSTGQLV 318
Query: 83 SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE 142
+ + GT ++ ++ L K+ H+G +S + F+ G+ + T + ++WD E
Sbjct: 319 ATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGE 378
Query: 143 VLQTLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKG 193
LQ L GH + FS + NY GN+++ G
Sbjct: 379 CLQVLKGHTDEI---------------------FSCAFNYE---GNTIITG 405
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + Y G +++ + NP + +++ G T +W + + + H
Sbjct: 161 LWSAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAA 220
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
+ +L+F+ G + T + + +W++ + TL GH
Sbjct: 221 EIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGH 260
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 102 LIKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH---AKTLDFS 157
L K+L H P++ +AF+ +G T + K+WD E L TL GH + F+
Sbjct: 84 LFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFN 143
Query: 158 QKGLLAVGTGSFAQILGDFSGSHN--YSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211
+ TGSF + +S Y + G++ +I + F P ++ G
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTA----EIVCLVFNPQSTLIATG 195
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG 128
++ + NP V+ TV +W T+ LL H V++L+FHP+G+ + T
Sbjct: 188 HSNYVDFNPMGTCVASAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTAS 247
Query: 129 KECKIKIWDLRKYEVLQTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
+ +KI DL + ++ TL GH ++ FS+ G + AQ+L
Sbjct: 248 NDGTVKILDLLEGRLIYTLHGHQGPVLSVAFSKSGDQFASGATDAQVL 295
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 74 RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKI 133
R +P +++ TV +W T + + ++G + + F+P G +A+ G + +
Sbjct: 151 RFSPDGRLIASCSDDKTVRIWDITNRLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTV 210
Query: 134 KIWDLRKYEVLQTLTGH---AKTLDFSQKG--LLAVGTGSFAQILGDFSG 178
K+WD+R ++LQ H +L F G LL +IL G
Sbjct: 211 KVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILDLLEG 260
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT- 148
++ W L + H V F P+G L+A+ + ++IWD+ + T
Sbjct: 125 SIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNRLCINTFVD 184
Query: 149 --GHAKTLDFSQKGLLAVGTG 167
GH+ +DF+ G G
Sbjct: 185 YKGHSNYVDFNPMGTCVASAG 205
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 5/133 (3%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRR--TDLMRVNPFNGVVSLGHSGGTVT 92
+ K A + ++W R G + ++ +P +V+ TV
Sbjct: 26 FSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVASSSKDRTVR 85
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH-- 150
+W P + H V + F +GH T + IK W+L + L +LT H
Sbjct: 86 LWAPNIKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTN 145
Query: 151 -AKTLDFSQKGLL 162
+ FS G L
Sbjct: 146 WVRCARFSPDGRL 158
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + NP ++ S V +W + LL H V+ L+FHP G+ + T +
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Query: 131 CKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLAVGTGSFAQIL 173
+K+ DL + ++ TL GH T+ FS+ G L G+ AQ+L
Sbjct: 250 GTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVL 295
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 61 RYMAVAGRRTDLMRVNPFNG----VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALA 116
R++ R T +R F+ +VS T+ +W T + G + +
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK-TIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 117 FHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA 151
F+PNG +A+ G + +KIWD+R ++LQ H+
Sbjct: 194 FNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHS 228
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 35 YGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVT 92
+ + K A + +LW L R G + + ++ +P +++ TV
Sbjct: 26 FSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVR 85
Query: 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH-- 150
+W + H PV ++ F +G L+ T ++ IK+W + + L +L H
Sbjct: 86 LWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTH 145
Query: 151 -AKTLDFSQKGLLAVGTG----------SFAQILGDFSGSHNYSRYM 186
+ FS G L V + Q + +FS S ++ ++
Sbjct: 146 WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV 192
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT- 148
++ +W L + H V F P+G L+ + ++ IKIWD + + +
Sbjct: 125 SIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 149 --GHAKTLDFSQKGLLAVGTGSFAQI-LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE 205
G A +DF+ G GS + + D ++ + + V + +SF P
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHAVKIWDI----RMNKLLQHYQVHSCGVNCLSFHPLG 240
Query: 206 DVLGIGHSMG 215
+ L S G
Sbjct: 241 NSLVTASSDG 250
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
+ + +P + S GTV M L+ + H GPV ++F +G L+ + G +
Sbjct: 232 NCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGAD 291
Query: 131 CKIKIW 136
++ IW
Sbjct: 292 AQVLIW 297
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 49 LVHILWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKML 106
LV + IL + G R + V + +++ GTV +W P L +
Sbjct: 540 LVSLQQILSQIAEKNVLTGHRDGVTSVAISSHKNLIASASRDGTVHLWTPQ-GEFLREFT 598
Query: 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK---TLDFSQKGLLA 163
H G + + F PNG + AT G++ +KIWDL +LQTL GH ++ FS G +
Sbjct: 599 GHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDG-NLLQTLKGHQDSVYSVSFSPDGEIL 657
Query: 164 VGT 166
T
Sbjct: 658 AST 660
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 67 GRRTDLMRVN--PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLM 124
G + RV+ P + + TV +W LL + HQ V +++F P+G ++
Sbjct: 599 GHTGSIYRVDFSPNGKIFATAGQDQTVKIWD-LDGNLLQTLKGHQDSVYSVSFSPDGEIL 657
Query: 125 ATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKGLLAVGTGSFAQI-LGDFSGSH 180
A+T ++ +++W R + L L GH K++D FS G V QI L D G
Sbjct: 658 ASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDG-- 715
Query: 181 NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223
N R G V + V++ P ++L + G + P+
Sbjct: 716 NLIRQFGLPEVAFF---GVNWHPNGNLLAVAADDGTVRLWTPQ 755
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 82 VSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKY 141
++ G G +T+W L+ ++ H ++ L + PNG + + G+E KIW +
Sbjct: 1012 LAAGDEQGNLTLWN-FDGTLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVEG- 1069
Query: 142 EVLQTLTGHAKTLD 155
++L TL +D
Sbjct: 1070 QLLHTLKSDPLPID 1083
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Query: 28 LPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVAGRRTDLMRV---NPFNGVVSL 84
LPL KS + LW S + G R + + NP+ ++
Sbjct: 93 LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T +W T H + L+F+P L+AT + K+WD++ E +
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Query: 145 QTLTGHAK---TLDFSQKGLLAVGTGSF 169
TLTGH+ +L F+ G + TGSF
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRII-TGSF 239
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
+++ + GT ++ T + K+ H+G +S ++F+P G+ + T + +IWD +
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Query: 141 YEVLQTLTGHAK---TLDFSQKGLLAVGTGS 168
+ LQ L GH + F+ KG + + TGS
Sbjct: 377 GQCLQVLEGHTDEIFSCAFNYKGDIII-TGS 406
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 16/170 (9%)
Query: 53 LWILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + S + G +++ + N + G TVT+W+ T + ++ H
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCA 262
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAK-----TLDFSQKGLLAVG 165
+S+ F+ + L+ T + K+WD + + TLTGH D++ K +
Sbjct: 263 EISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATAS 322
Query: 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGY--QIGKVSFRPYEDVLGIGHS 213
A+I FS + + ++G+ +I K+SF P + L G S
Sbjct: 323 ADGTARI---FSAATRECV----TKLEGHEGEISKISFNPQGNRLLTGSS 365
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 53 LWILPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW + + Y G ++ + NP + +V+ G T +W + + + H
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSA 220
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHA 151
+ +L+F+ +G+ + T + + +W+ + TL GH
Sbjct: 221 EIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 85 GHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144
G T+ MW +T L+ ++ H V + FHP G + + + ++IWD + +
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCM 373
Query: 145 QTLTGH---AKTLDFSQKGLLAVGTGSFAQIL 173
+TL+ H +LDF K V TGS Q +
Sbjct: 374 KTLSAHEHFVTSLDF-HKASPYVVTGSVDQTV 404
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLA 163
H+ PV+ + FHP LM + ++ IK+WD + +TL GH + + F Q G LLA
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 164 VGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED 206
+ L DF G G+ + + V+ P D
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHD----HNVSSVAIMPNGD 205
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 54 WILPSSGRYMAVAGRRTDLMRV--NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111
WI P A++G R+ + RV +P ++ T+ +W + H
Sbjct: 94 WI-PRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDS 152
Query: 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH 150
V ++F G L+A+ + IK+WD + +E ++T+ GH
Sbjct: 153 VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149
T+ +W + M H VS++A PNG + + ++ +K+W++ ++T TG
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTG 232
Query: 150 H 150
H
Sbjct: 233 H 233
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 56 LPSSGRYMAVAGRRTDL--MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVS 113
+PS R ++ T + M ++P N +++ G + G V +W + + H G +S
Sbjct: 90 IPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVIS 149
Query: 114 ALAF--HPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKGLLAVGTGSF 169
AL F H N ++A+ + ++++WDL + GH+ + +GL TGSF
Sbjct: 150 ALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVI----RGLTFEPTGSF 203
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKG---- 160
M H+ PV + P L+AT G E +K+WD+ V + GH + G
Sbjct: 99 MKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQN 158
Query: 161 --LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP 203
+LA G L D + S + + + G+S V I ++F P
Sbjct: 159 TWVLASGADDSRVRLWDLNSSRSMAVFEGHSSV----IRGLTFEP 199
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 44/87 (50%)
Query: 68 RRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATT 127
R + ++V+ +++ T+ +W +T ++ + H+ V A +F+P +A+
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASG 525
Query: 128 GKECKIKIWDLRKYEVLQTLTGHAKTL 154
+ I+IW++ + +QTL GH +
Sbjct: 526 SGDRTIRIWNVDTQQCVQTLEGHTGAI 552
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 76 NPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
NPF+ ++ G T+ +W T + + H G + L + G + + + +K+
Sbjct: 516 NPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKV 575
Query: 136 WDLRKYEVLQTLTGH 150
W L E + TL H
Sbjct: 576 WSLSSGECVATLDNH 590
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKGLLAVGTG 167
H V+A+ +G ++A+ ++ IK+WD EV+ L GH ++G+ A
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGH-------RRGVWACSFN 516
Query: 168 SFAQILGDFSG 178
F++ L SG
Sbjct: 517 PFSRQLASGSG 527
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/67 (19%), Positives = 32/67 (47%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
V++ G V +W +S + H + L F P G + + ++ +++W+++K
Sbjct: 161 VLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKK 220
Query: 141 YEVLQTL 147
++T+
Sbjct: 221 RSAVRTI 227
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+ +P ++ G S T+ +W+ + LL + H+ V+ + F P+G +A+ +
Sbjct: 1119 VSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHS 1178
Query: 133 IKIWDLRKYEVLQTLTGHAK---TLDFSQKG 160
IK+WD ++L TLTGH+ T+ FS G
Sbjct: 1179 IKLWDTTSGQLLMTLTGHSAGVITVRFSPDG 1209
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 53 LWILPSSGRYMAVAGRRTDLM--RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG 110
LW S M + G ++ R +P ++ G TV +W LL + HQ
Sbjct: 1181 LWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQD 1240
Query: 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKT---LDFSQKG 160
V++L+F P+G +A+ + IK+W + ++++TL GH + ++FS G
Sbjct: 1241 WVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDG 1293
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 7 DTKVKKYLRGEDFKRQKLKGQLPLREELYGKSAKAAAKVEKNLVHILWILPSSGRYMAVA 66
D K K L G D + K+ + K A ++ LW + S G++
Sbjct: 1435 DGKALKTLIGHDNEVNKVN---------FSPDGKTLASASRDNTVKLWNV-SDGKFKKTL 1484
Query: 67 GRRTD---LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL 123
TD + +P +++ + T+ +W + L+ + H V ++ F+P+G +
Sbjct: 1485 KGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSM 1544
Query: 124 MATTGKECKIKIWDLRKYEVLQTLTGHAKTL---DFSQKG 160
+A+T + +K+W +L T +GH+ + FS G
Sbjct: 1545 LASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDG 1584
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 87 SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146
S ++ +W T+ LL+ + H V + F P+G +A ++ +K+W + ++L+T
Sbjct: 1175 SDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKT 1234
Query: 147 LTGH---AKTLDFSQKG 160
L GH +L FS G
Sbjct: 1235 LNGHQDWVNSLSFSPDG 1251
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140
+++ + G + +W +LL K L + ++F P G L+A+ + +KIW +R
Sbjct: 1377 IIATAGADGNIQLWHSQDGSLL-KTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRD 1435
Query: 141 YEVLQTLTGH---AKTLDFSQKG 160
+ L+TL GH ++FS G
Sbjct: 1436 GKALKTLIGHDNEVNKVNFSPDG 1458
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLD---FSQKG 160
H+ V +++F P+G +A+ G + IK+W +L+T+TGH +T++ FS G
Sbjct: 1112 HEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDG 1167
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+ P +++ ++ TV +W+ L ++ H V+ + F P+G +A+ ++
Sbjct: 1410 ISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNT 1469
Query: 133 IKIWDLRKYEVLQTLTGHAKT---LDFSQKG-LLAVGTGSFAQILGD-FSGSHNYSRYMG 187
+K+W++ + +TL GH + FS G ++A + L D FSG+ S
Sbjct: 1470 VKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAH 1529
Query: 188 NSMVKGYQIGKVSFRP 203
N +V V+F P
Sbjct: 1530 NDLVY-----SVNFNP 1540
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK 132
+ NP +++ + TV +W+ LL H V + +F P+G +A+ ++
Sbjct: 1536 VNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKT 1595
Query: 133 IKIWDLRKYEVLQTLTGH 150
+KIW + + +L TL H
Sbjct: 1596 VKIWQIDGH-LLTTLPQH 1612
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 77 PFNGVVSLGHSGGTVTMW-KPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKI 135
P + +++ T+ +W +P S L ++L V A++F +G ++AT G + I++
Sbjct: 1332 PDSNIIASASLDNTIRLWQRPLISPL--EVLAGNSGVYAVSFLHDGSIIATAGADGNIQL 1389
Query: 136 WDLRKYEVLQTLTGH 150
W + +L+TL G+
Sbjct: 1390 WHSQDGSLLKTLPGN 1404
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 71 DLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE 130
D + +P V G S T MW +T + L H PV ++A P+G ++T ++
Sbjct: 613 DCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSED 672
Query: 131 CKIKIWDLRKYEVLQTLTGHAK----TLDFSQKGLLAVGTGS 168
I +WD+ + L+ + GH K +L +S++G + + G+
Sbjct: 673 GIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGA 714
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 77 PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIW 136
P N + G TV +W T L+ H PV ++F P GH AT + ++W
Sbjct: 535 PDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLW 594
Query: 137 DLRKYEVLQTLTGHAKTLD---FSQKGLLAVGTGS 168
L+ GH +D F G V TGS
Sbjct: 595 SCDHIYPLRIFAGHLNDVDCVSFHPNGCY-VFTGS 628
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 73 MRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH-QGPVSALAFHPNGHLMATTGKEC 131
+ V P +S G G + +W T L +M H + + +L++ G+++ + G +
Sbjct: 657 IAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADH 716
Query: 132 KIKIWDLRK 140
+++WDL+K
Sbjct: 717 TVRVWDLKK 725
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,091,181
Number of Sequences: 539616
Number of extensions: 5788279
Number of successful extensions: 25762
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 419
Number of HSP's that attempted gapping in prelim test: 22190
Number of HSP's gapped (non-prelim): 3675
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)