Query 040274
Match_columns 359
No_of_seqs 465 out of 3468
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 10:36:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 8E-28 2.7E-32 218.2 23.9 165 52-221 126-318 (321)
2 2ynn_A Coatomer subunit beta'; 100.0 1.9E-27 6.6E-32 213.9 25.3 181 52-236 17-259 (304)
3 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-27 4.9E-32 218.6 23.3 166 52-221 20-222 (345)
4 4gqb_B Methylosome protein 50; 100.0 3.5E-27 1.2E-31 216.1 25.6 164 52-219 34-241 (344)
5 4gqb_B Methylosome protein 50; 100.0 2.7E-27 9.3E-32 216.8 24.3 167 52-224 86-289 (344)
6 4ery_A WD repeat-containing pr 100.0 1.4E-26 4.7E-31 208.5 27.1 165 52-220 27-219 (312)
7 1vyh_C Platelet-activating fac 100.0 6.7E-27 2.3E-31 219.3 24.8 169 52-225 154-370 (410)
8 3ow8_A WD repeat-containing pr 100.0 8.3E-27 2.8E-31 211.5 24.4 170 52-226 84-281 (321)
9 1vyh_C Platelet-activating fac 100.0 8.3E-27 2.8E-31 218.7 24.5 164 52-220 112-323 (410)
10 1got_B GT-beta; complex (GTP-b 100.0 1.2E-26 4E-31 212.1 24.3 147 69-220 186-339 (340)
11 1erj_A Transcriptional repress 100.0 2.2E-26 7.5E-31 214.5 26.0 168 52-221 68-284 (393)
12 2pbi_B Guanine nucleotide-bind 99.9 4.6E-26 1.6E-30 209.4 25.7 172 52-226 110-317 (354)
13 4g56_B MGC81050 protein; prote 99.9 3.8E-26 1.3E-30 210.3 23.5 180 52-235 46-300 (357)
14 2pbi_B Guanine nucleotide-bind 99.9 7.6E-26 2.6E-30 207.9 24.7 164 52-220 158-353 (354)
15 4g56_B MGC81050 protein; prote 99.9 3.7E-26 1.3E-30 210.3 22.0 169 52-225 98-302 (357)
16 1got_B GT-beta; complex (GTP-b 99.9 1.3E-25 4.4E-30 205.1 25.3 165 52-222 59-255 (340)
17 3iz6_a 40S ribosomal protein R 99.9 1.2E-25 4.2E-30 208.5 23.5 156 69-225 207-376 (380)
18 3fm0_A Protein CIAO1; WDR39,SG 99.9 2.8E-25 9.6E-30 203.4 23.3 172 52-223 65-282 (345)
19 2ynn_A Coatomer subunit beta'; 99.9 2.8E-25 9.7E-30 199.7 22.5 150 69-222 15-170 (304)
20 3frx_A Guanine nucleotide-bind 99.9 1.1E-24 3.7E-29 197.3 25.4 168 52-225 21-228 (319)
21 1erj_A Transcriptional repress 99.9 5.4E-25 1.8E-29 205.1 23.9 170 52-226 127-343 (393)
22 3vl1_A 26S proteasome regulato 99.9 8.8E-25 3E-29 204.4 24.2 177 52-232 101-330 (420)
23 2xzm_R RACK1; ribosome, transl 99.9 3.7E-24 1.3E-28 195.7 25.9 166 52-223 25-243 (343)
24 2pm7_B Protein transport prote 99.9 2.3E-24 7.9E-29 193.1 23.1 170 52-225 13-239 (297)
25 1gxr_A ESG1, transducin-like e 99.9 5.6E-24 1.9E-28 192.3 25.7 170 52-227 101-299 (337)
26 4ery_A WD repeat-containing pr 99.9 4.1E-24 1.4E-28 192.3 24.6 173 52-226 69-270 (312)
27 4aow_A Guanine nucleotide-bind 99.9 6.9E-24 2.4E-28 192.3 24.9 155 69-225 173-338 (340)
28 1nr0_A Actin interacting prote 99.9 3.5E-24 1.2E-28 210.9 24.6 170 52-223 107-354 (611)
29 3iz6_a 40S ribosomal protein R 99.9 6.5E-25 2.2E-29 203.6 18.0 168 52-223 70-279 (380)
30 2hes_X YDR267CP; beta-propelle 99.9 3.9E-24 1.3E-28 194.5 22.8 165 52-222 18-228 (330)
31 2xzm_R RACK1; ribosome, transl 99.9 4.7E-24 1.6E-28 195.0 23.4 170 52-223 122-339 (343)
32 2hes_X YDR267CP; beta-propelle 99.9 2.3E-24 7.9E-29 196.0 21.0 168 52-222 111-326 (330)
33 4h5i_A Guanine nucleotide-exch 99.9 2.7E-24 9.4E-29 198.4 21.6 165 52-222 137-341 (365)
34 2ymu_A WD-40 repeat protein; u 99.9 4.3E-24 1.5E-28 208.0 23.9 162 52-221 389-577 (577)
35 1nr0_A Actin interacting prote 99.9 6.3E-24 2.2E-28 209.1 25.1 168 52-224 22-270 (611)
36 3frx_A Guanine nucleotide-bind 99.9 1.2E-23 4E-28 190.5 24.5 171 52-223 111-316 (319)
37 4h5i_A Guanine nucleotide-exch 99.9 3.1E-24 1.1E-28 198.0 20.5 146 70-221 136-297 (365)
38 3jrp_A Fusion protein of prote 99.9 4.7E-24 1.6E-28 196.0 21.6 170 52-225 15-241 (379)
39 2ymu_A WD-40 repeat protein; u 99.9 8.6E-24 2.9E-28 205.9 24.5 163 52-222 348-537 (577)
40 3dwl_C Actin-related protein 2 99.9 6.2E-25 2.1E-29 202.7 15.5 171 52-227 15-239 (377)
41 3bg1_A Protein SEC13 homolog; 99.9 2.1E-24 7.2E-29 195.1 18.0 169 52-224 17-247 (316)
42 3f3f_A Nucleoporin SEH1; struc 99.9 1E-23 3.5E-28 190.7 22.4 171 52-226 15-339 (351)
43 1gxr_A ESG1, transducin-like e 99.9 3.9E-23 1.3E-27 186.7 25.5 164 52-221 55-252 (337)
44 4e54_B DNA damage-binding prot 99.9 5.8E-24 2E-28 200.7 20.6 173 52-229 123-332 (435)
45 2pm7_B Protein transport prote 99.9 3.4E-23 1.2E-27 185.4 23.8 170 52-223 57-284 (297)
46 3dm0_A Maltose-binding peripla 99.9 2.1E-23 7.2E-28 208.3 23.7 169 52-225 386-593 (694)
47 3vl1_A 26S proteasome regulato 99.9 8.7E-24 3E-28 197.7 19.5 167 52-220 60-274 (420)
48 3dm0_A Maltose-binding peripla 99.9 2E-23 7E-28 208.4 23.3 171 52-223 476-692 (694)
49 2j04_B YDR362CP, TAU91; beta p 99.9 3.9E-24 1.3E-28 206.1 17.4 166 52-223 211-427 (524)
50 3ei3_B DNA damage-binding prot 99.9 7.1E-23 2.4E-27 189.4 24.9 164 52-222 77-280 (383)
51 2pm9_A Protein WEB1, protein t 99.9 3.3E-23 1.1E-27 193.2 21.7 166 52-221 71-291 (416)
52 2aq5_A Coronin-1A; WD40 repeat 99.9 1.3E-22 4.4E-27 189.2 25.0 173 52-227 85-302 (402)
53 3dwl_C Actin-related protein 2 99.9 1.2E-23 4.2E-28 193.9 17.7 166 52-221 59-279 (377)
54 3mkq_A Coatomer beta'-subunit; 99.9 7.4E-23 2.5E-27 207.2 23.9 165 52-220 17-213 (814)
55 1k8k_C P40, ARP2/3 complex 41 99.9 1.6E-22 5.3E-27 185.6 23.9 170 52-225 12-234 (372)
56 4aez_A CDC20, WD repeat-contai 99.9 2.7E-22 9.3E-27 187.1 25.1 163 52-222 138-334 (401)
57 3zwl_B Eukaryotic translation 99.9 1.2E-22 4.1E-27 185.7 22.2 169 52-225 36-250 (369)
58 2j04_A TAU60, YPL007P, hypothe 99.9 8.3E-23 2.8E-27 194.2 21.0 145 69-223 87-253 (588)
59 1k8k_C P40, ARP2/3 complex 41 99.9 2E-22 7E-27 184.8 22.7 168 52-223 100-360 (372)
60 4e54_B DNA damage-binding prot 99.9 8.5E-23 2.9E-27 192.7 20.6 146 69-220 121-278 (435)
61 3zwl_B Eukaryotic translation 99.9 4.1E-22 1.4E-26 182.1 24.5 166 52-222 119-344 (369)
62 3k26_A Polycomb protein EED; W 99.9 2E-22 6.8E-27 184.2 21.3 169 52-222 73-364 (366)
63 3jro_A Fusion protein of prote 99.9 9.7E-23 3.3E-27 205.3 20.9 165 52-220 13-234 (753)
64 3jrp_A Fusion protein of prote 99.9 4.8E-22 1.6E-26 182.5 23.6 171 52-223 59-286 (379)
65 3mmy_A MRNA export factor; mRN 99.9 1.5E-22 5.3E-27 184.9 20.1 158 52-215 43-337 (368)
66 2xyi_A Probable histone-bindin 99.9 3.7E-22 1.3E-26 188.1 23.2 170 52-222 185-408 (430)
67 3ei3_B DNA damage-binding prot 99.9 1.5E-22 5.2E-27 187.2 19.9 165 52-222 167-380 (383)
68 4gga_A P55CDC, cell division c 99.9 5.2E-22 1.8E-26 186.4 23.8 149 69-222 232-393 (420)
69 2oaj_A Protein SNI1; WD40 repe 99.9 1.9E-22 6.5E-27 206.6 22.4 170 52-226 21-244 (902)
70 2w18_A PALB2, fancn, partner a 99.9 3.8E-22 1.3E-26 178.8 21.4 166 52-221 160-354 (356)
71 2aq5_A Coronin-1A; WD40 repeat 99.9 4.4E-22 1.5E-26 185.6 22.8 148 69-220 83-250 (402)
72 3bg1_A Protein SEC13 homolog; 99.9 9.1E-23 3.1E-27 184.3 17.6 168 52-223 61-292 (316)
73 1r5m_A SIR4-interacting protei 99.9 6.4E-22 2.2E-26 184.4 23.6 168 52-224 112-361 (425)
74 4aow_A Guanine nucleotide-bind 99.9 1.4E-21 4.9E-26 176.9 24.2 165 52-221 42-243 (340)
75 1sq9_A Antiviral protein SKI8; 99.9 7.3E-22 2.5E-26 183.0 22.3 152 70-224 189-395 (397)
76 4a11_B DNA excision repair pro 99.9 1E-21 3.6E-26 182.1 23.2 172 52-227 103-368 (408)
77 1yfq_A Cell cycle arrest prote 99.9 4.5E-22 1.5E-26 180.6 19.9 169 52-225 15-226 (342)
78 3k26_A Polycomb protein EED; W 99.9 1.1E-21 3.9E-26 179.1 22.4 155 69-227 71-263 (366)
79 3i2n_A WD repeat-containing pr 99.9 7E-22 2.4E-26 180.1 20.8 164 52-221 22-240 (357)
80 3dw8_B Serine/threonine-protei 99.9 1.1E-21 3.8E-26 184.7 22.5 180 52-233 32-324 (447)
81 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-21 3.9E-26 185.7 22.4 151 70-226 105-273 (450)
82 1r5m_A SIR4-interacting protei 99.9 1.8E-21 6.1E-26 181.3 23.2 164 52-221 49-275 (425)
83 2xyi_A Probable histone-bindin 99.9 1.5E-21 5.1E-26 183.9 22.2 169 52-224 132-353 (430)
84 4a11_B DNA excision repair pro 99.9 5E-21 1.7E-25 177.5 25.2 173 52-225 47-277 (408)
85 3sfz_A APAF-1, apoptotic pepti 99.9 1.4E-21 4.7E-26 206.9 24.1 167 52-220 619-867 (1249)
86 3lrv_A PRE-mRNA-splicing facto 99.9 7.4E-22 2.5E-26 180.3 18.9 167 52-228 129-337 (343)
87 3lrv_A PRE-mRNA-splicing facto 99.9 1.6E-21 5.6E-26 178.0 21.2 155 69-225 127-293 (343)
88 3f3f_A Nucleoporin SEH1; struc 99.9 2.2E-21 7.7E-26 175.2 21.5 110 69-178 13-144 (351)
89 4aez_A CDC20, WD repeat-contai 99.9 2.6E-21 8.9E-26 180.4 22.5 169 52-226 180-382 (401)
90 3dw8_B Serine/threonine-protei 99.9 1.7E-21 5.9E-26 183.4 21.4 155 70-226 180-375 (447)
91 2pm9_A Protein WEB1, protein t 99.9 1.7E-21 6E-26 181.5 21.1 170 52-226 117-339 (416)
92 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.1E-21 1E-25 182.8 22.6 169 52-222 106-337 (450)
93 3odt_A Protein DOA1; ubiquitin 99.9 8E-21 2.7E-25 169.8 23.5 163 52-226 63-257 (313)
94 4ggc_A P55CDC, cell division c 99.9 8.2E-21 2.8E-25 170.3 23.6 150 69-223 152-314 (318)
95 2j04_B YDR362CP, TAU91; beta p 99.9 8.8E-22 3E-26 189.7 18.3 170 52-223 270-516 (524)
96 3i2n_A WD repeat-containing pr 99.9 2.8E-21 9.7E-26 176.0 19.5 170 52-226 69-293 (357)
97 2j04_A TAU60, YPL007P, hypothe 99.9 2.6E-21 9E-26 184.0 19.6 162 52-222 89-295 (588)
98 3mkq_A Coatomer beta'-subunit; 99.9 2.6E-21 8.9E-26 195.9 20.9 150 69-222 15-170 (814)
99 3gre_A Serine/threonine-protei 99.9 2.6E-21 9E-26 182.0 18.8 174 52-227 115-362 (437)
100 1sq9_A Antiviral protein SKI8; 99.9 4.2E-21 1.4E-25 177.9 19.7 169 52-226 66-324 (397)
101 3gre_A Serine/threonine-protei 99.9 3E-21 1E-25 181.6 18.7 170 52-226 67-294 (437)
102 3jro_A Fusion protein of prote 99.9 5.4E-21 1.9E-25 192.6 21.7 171 52-223 57-284 (753)
103 3v7d_B Cell division control p 99.9 9.6E-21 3.3E-25 179.6 22.2 176 55-236 127-381 (464)
104 3vu4_A KMHSV2; beta-propeller 99.9 1.7E-20 5.9E-25 172.2 23.1 168 52-225 23-272 (355)
105 3odt_A Protein DOA1; ubiquitin 99.9 2.6E-20 9E-25 166.5 22.1 161 52-223 108-295 (313)
106 1pgu_A Actin interacting prote 99.9 1.4E-20 4.9E-25 184.0 21.9 164 52-222 410-612 (615)
107 3mmy_A MRNA export factor; mRN 99.9 2.9E-20 9.9E-25 169.7 21.1 110 69-178 41-161 (368)
108 3sfz_A APAF-1, apoptotic pepti 99.9 1.9E-20 6.5E-25 198.2 22.5 152 69-225 617-775 (1249)
109 4gga_A P55CDC, cell division c 99.9 6.9E-20 2.4E-24 171.9 22.5 146 69-220 107-257 (420)
110 1yfq_A Cell cycle arrest prote 99.8 3.3E-20 1.1E-24 168.2 18.7 171 52-226 60-284 (342)
111 1pgu_A Actin interacting prote 99.8 1.5E-19 5E-24 176.8 23.7 164 52-223 68-282 (615)
112 4gq1_A NUP37; propeller, trans 99.8 2.9E-20 1E-24 173.1 17.6 146 74-220 96-282 (393)
113 4gq1_A NUP37; propeller, trans 99.8 3E-20 1E-24 173.0 16.9 167 52-223 140-389 (393)
114 3v7d_B Cell division control p 99.8 1.8E-19 6.3E-24 170.7 22.4 146 74-226 275-423 (464)
115 3vu4_A KMHSV2; beta-propeller 99.8 2.5E-19 8.5E-24 164.5 21.8 142 81-223 149-335 (355)
116 4ggc_A P55CDC, cell division c 99.8 3.5E-19 1.2E-23 159.6 21.8 150 70-225 28-182 (318)
117 1p22_A F-BOX/WD-repeat protein 99.8 7.5E-19 2.6E-23 165.5 23.0 143 69-222 215-363 (435)
118 1p22_A F-BOX/WD-repeat protein 99.8 7.2E-19 2.5E-23 165.6 21.7 158 53-221 136-322 (435)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.8 8.2E-19 2.8E-23 165.6 22.0 155 55-220 124-304 (445)
120 1l0q_A Surface layer protein; 99.8 4.3E-18 1.5E-22 157.4 25.4 162 52-220 35-229 (391)
121 1l0q_A Surface layer protein; 99.8 2.9E-18 1E-22 158.6 24.0 167 52-225 77-276 (391)
122 2oaj_A Protein SNI1; WD40 repe 99.8 4E-19 1.4E-23 182.0 19.5 148 69-223 19-181 (902)
123 2w18_A PALB2, fancn, partner a 99.8 1.9E-18 6.6E-23 154.8 20.2 167 52-226 115-316 (356)
124 2oit_A Nucleoporin 214KDA; NH2 99.8 6.1E-19 2.1E-23 166.3 17.9 158 52-211 40-258 (434)
125 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3E-18 1E-22 161.7 21.9 158 52-216 243-430 (445)
126 3bws_A Protein LP49; two-domai 99.8 1.2E-17 4.1E-22 156.6 22.9 156 52-214 173-365 (433)
127 3bws_A Protein LP49; two-domai 99.8 1.2E-17 4E-22 156.6 20.8 168 52-225 126-335 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.9E-17 2E-21 151.8 22.2 156 52-215 182-375 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.7 4.6E-16 1.6E-20 146.6 21.0 181 52-233 96-342 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.6E-15 5.5E-20 142.0 21.5 148 69-223 180-343 (415)
131 2ojh_A Uncharacterized protein 99.7 1.6E-15 5.3E-20 133.7 19.1 156 52-214 45-237 (297)
132 3vgz_A Uncharacterized protein 99.7 7.1E-15 2.4E-19 133.5 23.3 173 52-225 44-263 (353)
133 1nir_A Nitrite reductase; hemo 99.7 3.3E-15 1.1E-19 144.6 20.6 165 54-223 143-354 (543)
134 2ecf_A Dipeptidyl peptidase IV 99.7 3E-15 1E-19 150.1 20.2 138 70-213 111-305 (741)
135 1ri6_A Putative isomerase YBHE 99.7 9.6E-15 3.3E-19 131.8 21.4 169 52-222 87-306 (343)
136 1ri6_A Putative isomerase YBHE 99.7 1.1E-14 3.9E-19 131.3 21.2 171 52-223 41-261 (343)
137 3vgz_A Uncharacterized protein 99.6 1.1E-14 3.9E-19 132.1 20.4 158 52-215 144-335 (353)
138 1pby_B Quinohemoprotein amine 99.6 1.5E-14 5E-19 130.3 20.5 165 52-226 37-312 (337)
139 3u4y_A Uncharacterized protein 99.6 5E-14 1.7E-18 127.0 22.5 156 69-226 42-209 (331)
140 3hfq_A Uncharacterized protein 99.6 8.2E-14 2.8E-18 126.6 22.8 167 52-222 89-315 (347)
141 1xfd_A DIP, dipeptidyl aminope 99.6 3.3E-15 1.1E-19 149.4 14.3 159 52-213 20-274 (723)
142 2ojh_A Uncharacterized protein 99.6 2.8E-14 9.5E-19 125.6 18.4 149 69-223 43-203 (297)
143 3u4y_A Uncharacterized protein 99.6 5.4E-14 1.8E-18 126.8 20.0 167 52-225 43-253 (331)
144 2z3z_A Dipeptidyl aminopeptida 99.6 1.1E-14 3.8E-19 145.2 17.0 168 52-221 85-339 (706)
145 3hfq_A Uncharacterized protein 99.6 9.3E-14 3.2E-18 126.3 21.7 172 52-223 43-270 (347)
146 1k32_A Tricorn protease; prote 99.6 1.2E-14 4E-19 151.5 17.7 162 52-221 299-499 (1045)
147 1xfd_A DIP, dipeptidyl aminope 99.6 1.5E-14 5.3E-19 144.4 17.5 159 52-215 64-329 (723)
148 1jmx_B Amine dehydrogenase; ox 99.6 5.5E-14 1.9E-18 127.3 18.2 163 52-225 46-326 (349)
149 2ecf_A Dipeptidyl peptidase IV 99.6 2.2E-14 7.5E-19 143.8 16.8 145 69-215 38-230 (741)
150 3scy_A Hypothetical bacterial 99.6 9.2E-13 3.1E-17 120.4 24.7 150 71-222 158-335 (361)
151 1nir_A Nitrite reductase; hemo 99.6 2.9E-13 9.9E-18 131.0 21.6 171 52-224 182-402 (543)
152 1z68_A Fibroblast activation p 99.5 3.2E-14 1.1E-18 142.2 14.2 142 72-214 20-189 (719)
153 2z3z_A Dipeptidyl aminopeptida 99.5 1.2E-13 4.2E-18 137.7 18.3 141 70-214 183-376 (706)
154 1z68_A Fibroblast activation p 99.5 4.7E-14 1.6E-18 141.0 14.2 152 52-212 19-271 (719)
155 3o4h_A Acylamino-acid-releasin 99.5 1.3E-13 4.4E-18 134.6 15.4 139 71-222 153-311 (582)
156 3o4h_A Acylamino-acid-releasin 99.5 4E-13 1.4E-17 131.1 17.6 163 51-222 24-225 (582)
157 1k32_A Tricorn protease; prote 99.5 2E-13 6.9E-18 142.2 16.2 156 52-215 248-442 (1045)
158 3scy_A Hypothetical bacterial 99.5 8.6E-12 3E-16 113.9 23.6 168 52-223 53-290 (361)
159 3pe7_A Oligogalacturonate lyas 99.5 2.2E-12 7.5E-17 118.8 18.5 156 54-213 41-257 (388)
160 4a5s_A Dipeptidyl peptidase 4 99.5 1.4E-12 4.7E-17 131.0 17.9 172 52-226 20-296 (740)
161 1jof_A Carboxy-CIS,CIS-muconat 99.5 3.7E-12 1.3E-16 116.9 19.1 172 52-223 43-290 (365)
162 1jof_A Carboxy-CIS,CIS-muconat 99.5 2.8E-12 9.5E-17 117.7 18.2 150 69-222 146-339 (365)
163 4a5s_A Dipeptidyl peptidase 4 99.5 9.2E-13 3.1E-17 132.3 15.9 145 69-215 18-192 (740)
164 1jmx_B Amine dehydrogenase; ox 99.4 2.3E-12 8E-17 116.4 16.1 148 72-225 4-176 (349)
165 1xip_A Nucleoporin NUP159; bet 99.4 6E-12 2.1E-16 115.6 18.2 152 52-211 41-231 (388)
166 1pby_B Quinohemoprotein amine 99.4 6.3E-12 2.2E-16 112.9 16.4 138 80-225 2-164 (337)
167 1q7f_A NHL, brain tumor CG1071 99.4 1.8E-10 6E-15 101.6 23.4 147 69-222 122-278 (286)
168 2gop_A Trilobed protease; beta 99.4 4.4E-11 1.5E-15 108.4 19.2 154 52-220 62-288 (347)
169 3fvz_A Peptidyl-glycine alpha- 99.4 7.2E-11 2.5E-15 106.7 20.6 167 52-222 94-320 (329)
170 3c5m_A Oligogalacturonate lyas 99.3 3.6E-12 1.2E-16 117.4 11.1 159 52-214 39-258 (396)
171 3e5z_A Putative gluconolactona 99.3 2.2E-10 7.6E-15 101.6 21.3 158 52-219 72-282 (296)
172 2xdw_A Prolyl endopeptidase; a 99.3 1.1E-10 3.7E-15 116.7 21.1 167 52-221 128-363 (710)
173 1q7f_A NHL, brain tumor CG1071 99.3 6.3E-10 2.2E-14 98.0 22.3 165 52-222 33-236 (286)
174 1rwi_B Serine/threonine-protei 99.3 3.9E-10 1.3E-14 98.3 20.3 165 52-221 70-261 (270)
175 2dg1_A DRP35, lactonase; beta 99.3 3.3E-10 1.1E-14 102.0 19.1 149 69-223 46-212 (333)
176 3azo_A Aminopeptidase; POP fam 99.3 8.5E-11 2.9E-15 116.2 16.5 148 70-221 132-320 (662)
177 3azo_A Aminopeptidase; POP fam 99.2 9.4E-11 3.2E-15 115.9 15.9 145 72-221 81-269 (662)
178 3pe7_A Oligogalacturonate lyas 99.2 3.7E-11 1.3E-15 110.5 12.0 136 73-214 41-209 (388)
179 2dg1_A DRP35, lactonase; beta 99.2 2.2E-09 7.4E-14 96.7 23.1 169 52-222 48-261 (333)
180 1rwi_B Serine/threonine-protei 99.2 1.2E-09 4.1E-14 95.1 20.7 165 52-223 27-221 (270)
181 2xdw_A Prolyl endopeptidase; a 99.2 3.4E-10 1.2E-14 113.0 19.2 139 70-214 127-306 (710)
182 2bkl_A Prolyl endopeptidase; m 99.2 5.9E-10 2E-14 111.1 20.3 167 52-222 124-347 (695)
183 3fvz_A Peptidyl-glycine alpha- 99.2 1.2E-09 4E-14 98.7 20.6 153 69-223 25-226 (329)
184 1xip_A Nucleoporin NUP159; bet 99.2 1.2E-10 4.2E-15 107.0 13.9 141 69-226 39-193 (388)
185 3e5z_A Putative gluconolactona 99.2 1E-09 3.5E-14 97.3 18.9 146 69-223 29-201 (296)
186 2bkl_A Prolyl endopeptidase; m 99.1 7.1E-10 2.4E-14 110.5 16.0 133 70-212 123-288 (695)
187 2gop_A Trilobed protease; beta 99.1 1.6E-09 5.3E-14 98.1 16.2 135 69-215 60-236 (347)
188 3no2_A Uncharacterized protein 99.1 1.1E-08 3.7E-13 90.0 20.8 158 52-212 40-231 (276)
189 2z2n_A Virginiamycin B lyase; 99.1 4.2E-08 1.4E-12 86.3 23.9 172 52-233 60-261 (299)
190 1yr2_A Prolyl oligopeptidase; 99.1 4.7E-09 1.6E-13 105.3 19.6 164 52-222 166-391 (741)
191 3no2_A Uncharacterized protein 99.1 1E-08 3.4E-13 90.3 19.2 161 55-226 19-197 (276)
192 3dr2_A Exported gluconolactona 99.1 7.1E-09 2.4E-13 92.4 18.4 158 52-219 89-302 (305)
193 1qks_A Cytochrome CD1 nitrite 99.1 9.5E-09 3.2E-13 99.5 20.6 151 69-224 198-373 (567)
194 2z2n_A Virginiamycin B lyase; 99.1 4.3E-08 1.5E-12 86.2 23.0 163 52-222 18-211 (299)
195 3g4e_A Regucalcin; six bladed 99.0 3.9E-08 1.3E-12 87.3 20.8 155 52-213 57-261 (297)
196 3dsm_A Uncharacterized protein 99.0 2.8E-08 9.4E-13 89.7 19.8 145 72-223 135-301 (328)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 9.4E-08 3.2E-12 84.8 21.9 147 70-223 119-298 (314)
198 3c5m_A Oligogalacturonate lyas 99.0 8.3E-09 2.8E-13 94.7 14.5 140 69-213 189-370 (396)
199 3dsm_A Uncharacterized protein 99.0 4.6E-08 1.6E-12 88.2 18.9 150 69-225 85-254 (328)
200 2oiz_A Aromatic amine dehydrog 99.0 2.3E-08 7.8E-13 91.5 16.9 135 78-221 14-179 (361)
201 2oiz_A Aromatic amine dehydrog 98.9 1.9E-08 6.4E-13 92.1 15.6 154 72-225 54-231 (361)
202 2qc5_A Streptogramin B lactona 98.9 4.4E-07 1.5E-11 79.6 23.8 164 52-222 65-258 (300)
203 2qc5_A Streptogramin B lactona 98.9 5.1E-07 1.8E-11 79.2 23.5 164 52-222 23-216 (300)
204 2ghs_A AGR_C_1268P; regucalcin 98.9 2.1E-07 7.1E-12 83.8 20.6 154 52-214 93-292 (326)
205 3g4e_A Regucalcin; six bladed 98.9 2.3E-07 8E-12 82.2 20.6 153 69-225 55-230 (297)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 2.6E-07 8.8E-12 82.0 20.0 152 70-225 73-257 (314)
207 3hrp_A Uncharacterized protein 98.9 2.9E-07 1E-11 85.6 20.8 167 52-222 134-352 (409)
208 1yr2_A Prolyl oligopeptidase; 98.8 4.2E-08 1.4E-12 98.4 15.0 138 70-214 165-336 (741)
209 2mad_H Methylamine dehydrogena 98.8 6.4E-07 2.2E-11 82.2 21.3 164 52-226 69-352 (373)
210 2ghs_A AGR_C_1268P; regucalcin 98.8 7.4E-07 2.5E-11 80.1 21.3 149 69-222 91-258 (326)
211 3dr2_A Exported gluconolactona 98.8 5E-07 1.7E-11 80.3 19.5 150 63-222 40-222 (305)
212 3iuj_A Prolyl endopeptidase; h 98.8 3.6E-07 1.2E-11 90.9 18.7 160 52-219 132-352 (693)
213 3sjl_D Methylamine dehydrogena 98.7 1E-06 3.4E-11 80.7 19.3 153 72-226 82-258 (386)
214 3hrp_A Uncharacterized protein 98.7 5.4E-07 1.9E-11 83.8 17.9 150 69-222 132-296 (409)
215 1qks_A Cytochrome CD1 nitrite 98.7 8.1E-07 2.8E-11 86.0 19.6 142 77-220 165-325 (567)
216 3sjl_D Methylamine dehydrogena 98.7 4.2E-07 1.5E-11 83.1 16.6 107 76-185 41-176 (386)
217 2qe8_A Uncharacterized protein 98.7 1.1E-06 3.9E-11 79.4 18.7 167 52-222 20-276 (343)
218 2hz6_A Endoplasmic reticulum t 98.6 1.7E-08 5.9E-13 92.6 4.6 138 78-226 8-151 (369)
219 3c75_H MADH, methylamine dehyd 98.6 3.4E-06 1.2E-10 78.4 19.3 150 72-227 181-405 (426)
220 2iwa_A Glutamine cyclotransfer 98.6 8.1E-06 2.8E-10 70.8 19.3 154 70-226 23-183 (266)
221 3iuj_A Prolyl endopeptidase; h 98.6 6.3E-07 2.2E-11 89.1 13.8 138 69-213 130-299 (693)
222 2mad_H Methylamine dehydrogena 98.6 5.5E-06 1.9E-10 76.0 19.0 148 72-224 70-243 (373)
223 2qe8_A Uncharacterized protein 98.6 2.7E-06 9.3E-11 76.9 16.8 145 69-215 18-216 (343)
224 2ece_A 462AA long hypothetical 98.5 4.1E-06 1.4E-10 77.5 17.4 149 73-222 143-350 (462)
225 2iwa_A Glutamine cyclotransfer 98.5 5.7E-06 1.9E-10 71.7 16.5 163 52-220 24-233 (266)
226 2ece_A 462AA long hypothetical 98.4 1.3E-05 4.5E-10 74.1 17.6 141 72-212 192-399 (462)
227 3c75_H MADH, methylamine dehyd 98.4 5.8E-06 2E-10 76.9 15.3 149 72-225 122-296 (426)
228 3nol_A Glutamine cyclotransfer 98.4 1.4E-05 4.7E-10 68.7 16.1 160 70-234 45-210 (262)
229 2hz6_A Endoplasmic reticulum t 98.4 3.8E-08 1.3E-12 90.3 0.1 148 70-226 40-194 (369)
230 3nok_A Glutaminyl cyclase; bet 98.4 1.1E-05 3.8E-10 69.3 15.0 155 70-234 57-219 (268)
231 1fwx_A Nitrous oxide reductase 98.3 1E-05 3.4E-10 77.5 15.5 154 69-224 135-361 (595)
232 1mda_H Methylamine dehydrogena 98.3 6.3E-06 2.1E-10 75.2 13.3 68 72-139 69-157 (368)
233 1fwx_A Nitrous oxide reductase 98.3 4E-06 1.4E-10 80.2 11.7 141 71-213 198-407 (595)
234 3nol_A Glutamine cyclotransfer 98.3 6.2E-05 2.1E-09 64.6 17.1 132 77-213 94-244 (262)
235 3mbr_X Glutamine cyclotransfer 98.3 0.00011 3.6E-09 62.6 18.2 157 70-234 23-188 (243)
236 2xe4_A Oligopeptidase B; hydro 98.3 7.7E-05 2.6E-09 74.8 20.4 165 52-221 177-395 (751)
237 2p9w_A MAL S 1 allergenic prot 98.2 0.00014 5E-09 64.5 18.2 152 70-223 15-214 (334)
238 1kb0_A Quinohemoprotein alcoho 98.2 4.7E-05 1.6E-09 75.3 16.7 151 71-227 246-510 (677)
239 1npe_A Nidogen, entactin; glyc 98.1 0.00066 2.3E-08 58.6 21.6 147 69-224 80-238 (267)
240 2fp8_A Strictosidine synthase; 98.1 0.00033 1.1E-08 62.4 20.1 147 70-221 128-310 (322)
241 3hxj_A Pyrrolo-quinoline quino 98.1 0.00013 4.6E-09 64.7 16.2 141 69-222 138-282 (330)
242 1npe_A Nidogen, entactin; glyc 98.0 0.0011 3.6E-08 57.3 21.0 149 69-222 37-196 (267)
243 2xe4_A Oligopeptidase B; hydro 98.0 6.2E-05 2.1E-09 75.5 14.8 107 69-178 175-305 (751)
244 3mbr_X Glutamine cyclotransfer 98.0 0.00052 1.8E-08 58.3 17.8 127 81-212 77-222 (243)
245 1yiq_A Quinohemoprotein alcoho 98.0 0.00015 5.1E-09 71.9 16.5 149 72-226 239-507 (689)
246 2fp8_A Strictosidine synthase; 98.0 0.00061 2.1E-08 60.6 19.0 158 58-223 7-215 (322)
247 3qqz_A Putative uncharacterize 98.0 0.0028 9.5E-08 54.4 22.2 185 69-266 28-235 (255)
248 2p4o_A Hypothetical protein; p 98.0 0.0018 6.2E-08 57.1 21.1 164 52-222 35-240 (306)
249 3qqz_A Putative uncharacterize 98.0 0.0016 5.4E-08 55.9 19.8 167 52-221 30-250 (255)
250 1kb0_A Quinohemoprotein alcoho 97.9 9.8E-05 3.4E-09 73.1 13.2 126 80-209 328-535 (677)
251 1mda_H Methylamine dehydrogena 97.9 6.6E-05 2.3E-09 68.4 10.6 86 90-177 47-158 (368)
252 3hxj_A Pyrrolo-quinoline quino 97.8 0.0003 1E-08 62.4 14.0 131 79-221 107-241 (330)
253 2xbg_A YCF48-like protein; pho 97.8 0.003 1E-07 56.4 20.5 142 69-217 164-315 (327)
254 3nok_A Glutaminyl cyclase; bet 97.8 0.00083 2.8E-08 57.7 15.4 127 80-211 107-252 (268)
255 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.00077 2.6E-08 61.2 16.2 144 78-226 52-209 (376)
256 3tc9_A Hypothetical hydrolase; 97.8 0.00087 3E-08 62.4 16.7 148 69-222 138-299 (430)
257 1yiq_A Quinohemoprotein alcoho 97.8 0.00036 1.2E-08 69.2 14.5 127 81-211 321-536 (689)
258 2p4o_A Hypothetical protein; p 97.8 0.0034 1.2E-07 55.3 19.5 121 87-215 136-279 (306)
259 3v64_C Agrin; beta propeller, 97.6 0.018 6.1E-07 51.9 22.4 146 69-221 117-272 (349)
260 3v64_C Agrin; beta propeller, 97.6 0.024 8.1E-07 51.0 22.8 148 69-221 74-231 (349)
261 1kv9_A Type II quinohemoprotei 97.6 0.002 6.8E-08 63.6 16.5 74 72-145 234-338 (668)
262 4hw6_A Hypothetical protein, I 97.6 0.0057 2E-07 56.9 18.7 167 52-221 185-430 (433)
263 4a2l_A BT_4663, two-component 97.6 0.02 6.9E-07 57.5 23.9 143 69-216 358-519 (795)
264 3tc9_A Hypothetical hydrolase; 97.5 0.012 4E-07 54.8 20.4 88 52-139 182-300 (430)
265 3v65_B Low-density lipoprotein 97.5 0.021 7.1E-07 52.2 21.8 147 69-221 160-315 (386)
266 1tl2_A L10, protein (tachylect 97.5 0.0028 9.6E-08 52.7 13.5 137 69-215 42-201 (236)
267 2xbg_A YCF48-like protein; pho 97.5 0.022 7.6E-07 50.7 20.9 142 70-214 124-270 (327)
268 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.0044 1.5E-07 56.1 16.4 141 79-234 143-303 (376)
269 3v65_B Low-density lipoprotein 97.4 0.023 8E-07 51.8 20.9 148 69-221 117-274 (386)
270 3pbp_A Nucleoporin NUP82; beta 97.4 0.012 4.2E-07 53.8 17.9 142 78-222 31-210 (452)
271 3v9f_A Two-component system se 97.4 0.02 6.9E-07 57.4 21.6 146 69-220 408-564 (781)
272 3v9f_A Two-component system se 97.4 0.029 9.9E-07 56.2 22.1 143 70-218 452-606 (781)
273 2ad6_A Methanol dehydrogenase 97.3 0.008 2.7E-07 58.1 17.1 74 73-147 240-342 (571)
274 4hw6_A Hypothetical protein, I 97.3 0.015 5E-07 54.1 18.4 150 69-222 140-302 (433)
275 1ijq_A LDL receptor, low-densi 97.3 0.065 2.2E-06 47.3 21.7 149 69-222 31-193 (316)
276 4a2l_A BT_4663, two-component 97.3 0.015 5.1E-07 58.4 19.1 141 70-217 408-565 (795)
277 2ad6_A Methanol dehydrogenase 97.3 0.002 7E-08 62.3 12.1 105 81-186 318-502 (571)
278 1k3i_A Galactose oxidase precu 97.3 0.0095 3.3E-07 58.5 17.0 72 71-142 246-325 (656)
279 1flg_A Protein (quinoprotein e 97.3 0.014 4.6E-07 56.6 17.6 75 72-147 250-362 (582)
280 2ism_A Putative oxidoreductase 97.2 0.036 1.2E-06 49.9 19.2 93 69-164 32-151 (352)
281 1w6s_A Methanol dehydrogenase 97.2 0.017 5.9E-07 56.0 17.6 75 72-147 245-349 (599)
282 3sov_A LRP-6, low-density lipo 97.2 0.11 3.8E-06 45.9 21.9 150 69-225 80-239 (318)
283 3p5b_L Low density lipoprotein 97.2 0.094 3.2E-06 48.1 21.6 148 69-221 113-274 (400)
284 3p5b_L Low density lipoprotein 97.1 0.16 5.5E-06 46.5 23.4 150 69-222 160-318 (400)
285 1ijq_A LDL receptor, low-densi 97.1 0.13 4.5E-06 45.3 23.8 151 69-224 78-238 (316)
286 1tl2_A L10, protein (tachylect 97.1 0.016 5.6E-07 48.1 13.6 133 77-216 2-155 (236)
287 2p9w_A MAL S 1 allergenic prot 97.1 0.15 5.1E-06 45.2 21.3 107 70-177 65-215 (334)
288 3kya_A Putative phosphatase; s 97.0 0.036 1.2E-06 52.2 17.3 149 69-220 140-337 (496)
289 1kv9_A Type II quinohemoprotei 97.0 0.0079 2.7E-07 59.3 13.5 129 81-213 316-521 (668)
290 3kya_A Putative phosphatase; s 97.0 0.036 1.2E-06 52.2 17.0 105 69-174 187-338 (496)
291 3a9g_A Putative uncharacterize 96.9 0.059 2E-06 48.6 17.6 94 69-164 30-151 (354)
292 3das_A Putative oxidoreductase 96.9 0.097 3.3E-06 46.9 18.4 140 68-212 32-220 (347)
293 2ism_A Putative oxidoreductase 96.8 0.13 4.6E-06 46.1 19.3 115 52-166 34-221 (352)
294 1flg_A Protein (quinoprotein e 96.8 0.0086 2.9E-07 58.0 11.8 123 81-207 338-542 (582)
295 3sre_A PON1, serum paraoxonase 96.8 0.066 2.3E-06 48.2 16.6 140 70-214 114-287 (355)
296 3sov_A LRP-6, low-density lipo 96.8 0.26 9E-06 43.5 20.8 148 69-221 36-194 (318)
297 1cru_A Protein (soluble quinop 96.7 0.14 4.6E-06 47.9 18.4 97 69-165 28-162 (454)
298 3pbp_A Nucleoporin NUP82; beta 96.6 0.024 8.2E-07 51.9 12.3 103 69-173 67-208 (452)
299 1w6s_A Methanol dehydrogenase 96.6 0.021 7.2E-07 55.4 12.7 124 80-207 324-529 (599)
300 2g8s_A Glucose/sorbosone dehyd 96.6 0.098 3.4E-06 47.0 16.3 101 64-164 14-146 (353)
301 3sre_A PON1, serum paraoxonase 96.5 0.21 7.3E-06 44.8 17.5 127 87-221 81-249 (355)
302 1k3i_A Galactose oxidase precu 96.4 0.033 1.1E-06 54.7 12.9 108 71-178 189-324 (656)
303 3m0c_C LDL receptor, low-densi 96.4 0.38 1.3E-05 48.1 20.5 139 69-212 425-576 (791)
304 3m0c_C LDL receptor, low-densi 96.4 0.96 3.3E-05 45.3 23.9 108 69-176 472-588 (791)
305 1n7d_A LDL receptor, low-densi 96.3 0.022 7.5E-07 56.4 11.1 106 70-176 455-570 (699)
306 1n7d_A LDL receptor, low-densi 96.3 0.031 1.1E-06 55.3 12.0 149 69-222 407-569 (699)
307 3amr_A 3-phytase; beta-propell 96.2 0.41 1.4E-05 42.7 17.4 134 79-221 40-207 (355)
308 3s94_A LRP-6, low-density lipo 96.1 0.67 2.3E-05 45.0 20.4 107 69-176 85-201 (619)
309 4a0p_A LRP6, LRP-6, low-densit 96.1 1.2 4E-05 43.4 23.5 150 69-225 81-238 (628)
310 3amr_A 3-phytase; beta-propell 96.0 0.77 2.6E-05 41.0 20.8 162 59-223 58-262 (355)
311 4a0p_A LRP6, LRP-6, low-densit 95.6 1 3.5E-05 43.8 19.2 146 69-220 38-193 (628)
312 2xzh_A Clathrin heavy chain 1; 95.4 1.3 4.5E-05 39.1 18.0 120 89-212 49-170 (365)
313 3s94_A LRP-6, low-density lipo 95.2 2.5 8.5E-05 41.0 21.2 147 69-221 350-507 (619)
314 3a9g_A Putative uncharacterize 95.2 1.7 5.7E-05 38.9 20.9 116 52-167 32-217 (354)
315 1bpo_A Protein (clathrin); cla 95.1 2 6.8E-05 39.6 17.8 120 89-212 48-169 (494)
316 3s25_A Hypothetical 7-bladed b 94.9 0.39 1.3E-05 42.1 12.5 127 72-214 57-204 (302)
317 3s25_A Hypothetical 7-bladed b 94.6 0.73 2.5E-05 40.3 13.5 127 71-213 107-242 (302)
318 3ei3_A DNA damage-binding prot 94.4 1.4 4.8E-05 46.1 17.1 88 90-178 808-914 (1158)
319 2g8s_A Glucose/sorbosone dehyd 94.2 0.96 3.3E-05 40.4 13.8 116 52-167 21-217 (353)
320 3ott_A Two-component system se 94.2 4.9 0.00017 39.7 21.1 139 70-216 193-345 (758)
321 2xn4_A Kelch-like protein 2; s 94.1 1.3 4.3E-05 38.3 14.1 99 78-178 108-230 (302)
322 3das_A Putative oxidoreductase 93.7 1.6 5.6E-05 38.9 13.9 106 107-212 29-158 (347)
323 1cru_A Protein (soluble quinop 93.1 1.6 5.6E-05 40.5 13.7 105 109-213 26-163 (454)
324 2vpj_A Kelch-like protein 12; 92.7 2.4 8.3E-05 36.4 13.6 99 78-178 112-232 (301)
325 2zwa_A Leucine carboxyl methyl 92.3 2.5 8.6E-05 41.6 14.4 71 72-142 494-579 (695)
326 2be1_A Serine/threonine-protei 92.2 0.22 7.4E-06 44.5 6.0 99 80-178 11-131 (339)
327 4gq2_M Nucleoporin NUP120; bet 92.0 8.7 0.0003 39.3 18.3 37 111-147 237-273 (950)
328 3sbq_A Nitrous-oxide reductase 91.9 0.64 2.2E-05 44.1 8.9 67 110-176 323-407 (638)
329 2vpj_A Kelch-like protein 12; 91.7 2.4 8.2E-05 36.4 12.3 98 78-178 62-185 (301)
330 3ott_A Two-component system se 91.6 11 0.00039 37.1 20.4 139 69-215 64-212 (758)
331 3ii7_A Kelch-like protein 7; p 90.9 2.5 8.6E-05 36.4 11.6 98 78-178 55-179 (306)
332 3ii7_A Kelch-like protein 7; p 90.5 5.7 0.00019 34.1 13.5 99 78-178 101-226 (306)
333 1zgk_A Kelch-like ECH-associat 89.8 2.3 8E-05 36.7 10.4 98 78-178 121-241 (308)
334 4asc_A Kelch repeat and BTB do 89.7 4.4 0.00015 35.0 12.1 98 78-178 98-222 (315)
335 2xn4_A Kelch-like protein 2; s 89.2 6.2 0.00021 33.8 12.6 98 78-178 61-183 (302)
336 1xi4_A Clathrin heavy chain; a 89.1 3.7 0.00013 43.6 12.4 120 89-212 48-169 (1630)
337 2zwa_A Leucine carboxyl methyl 88.8 10 0.00035 37.2 15.2 102 77-178 396-523 (695)
338 2wg3_C Hedgehog-interacting pr 88.4 10 0.00035 35.1 14.1 103 63-165 9-157 (463)
339 2woz_A Kelch repeat and BTB do 88.4 4.6 0.00016 34.9 11.3 100 78-178 109-232 (318)
340 2xzh_A Clathrin heavy chain 1; 87.0 4.9 0.00017 35.5 10.1 71 70-140 262-332 (365)
341 1zgk_A Kelch-like ECH-associat 87.0 7.1 0.00024 33.6 11.6 98 78-178 70-194 (308)
342 4asc_A Kelch repeat and BTB do 86.9 14 0.00048 31.7 13.5 100 77-178 44-175 (315)
343 3qhy_B Beta-lactamase inhibito 86.8 14 0.00048 31.6 16.6 116 52-175 74-205 (282)
344 2uvk_A YJHT; unknown function, 85.4 7.2 0.00025 34.3 11.0 49 89-138 168-224 (357)
345 3ei3_A DNA damage-binding prot 85.3 39 0.0013 35.3 20.8 93 81-174 525-633 (1158)
346 1bpo_A Protein (clathrin); cla 84.8 8.2 0.00028 35.6 10.8 68 70-137 261-328 (494)
347 2uvk_A YJHT; unknown function, 84.2 15 0.0005 32.2 12.5 53 78-130 65-128 (357)
348 2woz_A Kelch repeat and BTB do 83.5 16 0.00054 31.4 12.2 100 76-178 54-185 (318)
349 3sbq_A Nitrous-oxide reductase 82.7 3.6 0.00012 39.1 7.7 78 52-129 326-454 (638)
350 3qhy_B Beta-lactamase inhibito 80.7 26 0.00088 29.9 16.6 117 52-176 35-167 (282)
351 2wg3_C Hedgehog-interacting pr 80.5 26 0.00089 32.4 12.9 104 110-215 14-160 (463)
352 4gq2_M Nucleoporin NUP120; bet 79.2 7 0.00024 40.0 9.3 38 69-106 237-274 (950)
353 4fhn_B Nucleoporin NUP120; pro 77.6 6.7 0.00023 41.0 8.8 37 111-147 239-275 (1139)
354 2be1_A Serine/threonine-protei 73.5 8.2 0.00028 34.2 7.0 104 122-226 11-132 (339)
355 3b7f_A Glycosyl hydrolase, BNR 72.4 52 0.0018 29.2 16.6 144 69-215 56-254 (394)
356 4a9v_A PHOX; hydrolase, beta-p 72.3 18 0.0006 34.5 9.2 60 69-128 477-549 (592)
357 1xi4_A Clathrin heavy chain; a 71.8 95 0.0033 33.4 15.1 137 88-226 124-291 (1630)
358 3zwu_A Alkaline phosphatase PH 71.6 15 0.0005 35.3 8.7 57 71-127 479-548 (592)
359 3kci_A Probable E3 ubiquitin-p 70.0 60 0.002 28.9 16.0 96 80-175 63-185 (389)
360 3mez_B Mannose-specific lectin 62.5 40 0.0014 24.1 11.0 53 121-174 24-81 (113)
361 3f7f_A Nucleoporin NUP120; nuc 61.5 12 0.00042 36.6 6.0 34 112-147 224-257 (729)
362 4a9v_A PHOX; hydrolase, beta-p 59.4 29 0.00098 33.1 7.9 57 151-211 478-548 (592)
363 4fhn_B Nucleoporin NUP120; pro 58.8 8.4 0.00029 40.3 4.7 38 69-106 239-276 (1139)
364 3q6k_A 43.2 kDa salivary prote 58.0 1E+02 0.0036 27.5 11.6 106 110-216 87-246 (381)
365 3b7f_A Glycosyl hydrolase, BNR 54.6 1.1E+02 0.0039 26.9 16.1 92 80-174 23-144 (394)
366 3zwu_A Alkaline phosphatase PH 53.8 33 0.0011 32.8 7.5 56 152-211 479-548 (592)
367 3f7f_A Nucleoporin NUP120; nuc 49.3 25 0.00085 34.5 5.9 37 69-107 223-259 (729)
368 4h3o_A Lectin; cadmium, plant 46.4 74 0.0025 22.3 10.2 16 52-67 21-36 (105)
369 4hvt_A Ritya.17583.B, post-pro 45.1 2.3E+02 0.0079 27.7 17.1 127 89-220 216-375 (711)
370 3kci_A Probable E3 ubiquitin-p 44.8 1.6E+02 0.0056 25.9 18.2 124 52-175 118-291 (389)
371 3dzw_A Agglutinin; lectin, man 44.4 81 0.0028 22.2 10.0 14 197-210 84-97 (109)
372 3a0c_A Mannose/sialic acid-bin 42.0 89 0.003 22.0 12.1 14 196-209 84-97 (110)
373 3q6k_A 43.2 kDa salivary prote 38.4 2.2E+02 0.0074 25.4 11.8 15 52-66 223-241 (381)
374 3uc1_A DNA gyrase subunit A; D 37.5 2E+02 0.007 24.9 18.1 144 77-220 51-224 (327)
375 1b2p_A Protein (lectin); manno 31.5 1.4E+02 0.0049 21.3 11.9 15 196-210 94-108 (119)
376 3a0c_A Mannose/sialic acid-bin 31.1 1.4E+02 0.0047 21.0 10.4 83 70-174 21-104 (110)
377 3no0_A DNA gyrase subunit A; D 30.5 2.4E+02 0.0083 23.6 16.5 150 70-220 26-192 (276)
378 3ije_A Integrin alpha-V; integ 25.7 5.4E+02 0.019 26.2 12.1 65 75-139 231-321 (967)
379 3uc1_A DNA gyrase subunit A; D 24.4 3.4E+02 0.012 23.4 19.9 97 78-175 108-226 (327)
380 1sqj_A OXG-RCBH, oligoxylogluc 24.0 5.2E+02 0.018 25.4 18.1 142 69-214 16-190 (789)
381 2cn3_A Xyloglucanase, beta-1,4 23.4 5.2E+02 0.018 25.1 16.0 50 69-119 24-81 (737)
382 3mez_B Mannose-specific lectin 23.1 2E+02 0.0069 20.2 10.2 26 113-140 59-84 (113)
383 1q47_A Semaphorin 3A; beta pro 21.8 3.2E+02 0.011 25.3 8.3 56 80-135 422-487 (495)
384 3v4v_A Integrin alpha-4; cell 20.1 5.7E+02 0.019 24.3 10.6 87 88-174 189-310 (597)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=8e-28 Score=218.24 Aligned_cols=165 Identities=15% Similarity=0.209 Sum_probs=149.6
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
++++|+|+|++|++|+. .|.+++|+|++.+|++|+.||.|++||+.+++.+..+.+|
T Consensus 126 ~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h 205 (321)
T 3ow8_A 126 WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 205 (321)
T ss_dssp CCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc
Confidence 78999999999999875 5889999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYS 183 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~ 183 (359)
..+|++++|+|++.+|++++.|+.|++||++++..+..+. +.|.+++|+|+| +++++.|++|+|||+.+. ....
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~ 284 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVH 284 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEE
Confidence 9999999999999999999999999999999998888874 458999999999 888999999999997554 5556
Q ss_pred ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 184 RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 184 ~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
.+..|.. .|.+++|+|++.+|++++.||.+.+|.
T Consensus 285 ~~~~h~~----~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 285 TFFDHQD----QVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EECCCSS----CEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEcCCCC----cEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 6666644 899999999999999999999888876
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=1.9e-27 Score=213.87 Aligned_cols=181 Identities=10% Similarity=0.151 Sum_probs=151.4
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
++++|+|||.+|++++. .|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|
T Consensus 17 ~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h 96 (304)
T 2ynn_A 17 KGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH 96 (304)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCC
Confidence 89999999999999886 7899999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCC-eeeEee---cCCceeEEEcCC-C--cEEEEcCCcEEEEcCCCCCcc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKY-EVLQTL---TGHAKTLDFSQK-G--LLAVGTGSFAQILGDFSGSHN 181 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~-~~~~~~---~~~v~~~~~s~~-g--l~~~~~d~~i~v~d~~~~~~~ 181 (359)
.+.|++++|+|++.+|++|+.|++|++||++++ .....+ ...|.+++|+|+ + +++++.|++|++||+......
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 999999999999999999999999999999987 444555 345899999994 4 788899999999997554332
Q ss_pred ccccccccCCCCcceeEEEEcc--CCCEEEEEeCCCeEEE------------------------------EEcCCCCCce
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRP--YEDVLGIGHSMGWSGI------------------------------LVPRSSEPNF 229 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~g~~dg~~~i------------------------------~~~gs~~~~~ 229 (359)
......+ ...+..+.|+| ++.+|++|+.||.+++ +++++.|+.+
T Consensus 177 ~~~~~~~----~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 177 FTLTTGQ----ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp EEEECCC----TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred ceeccCC----cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE
Confidence 2222222 23688888886 6789999999998877 3556667778
Q ss_pred eeeccCC
Q 040274 230 DSWVANP 236 (359)
Q Consensus 230 ~~~~~~~ 236 (359)
++|+...
T Consensus 253 ~iWd~~~ 259 (304)
T 2ynn_A 253 KIWNSST 259 (304)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8887653
No 3
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=218.60 Aligned_cols=166 Identities=15% Similarity=0.265 Sum_probs=142.9
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC--cceE
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTS--ALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~--~~~~ 103 (359)
++++|+|||++|++|+. .|.+++|+|++.+|++|+.|++|++||+.++ .++.
T Consensus 20 ~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 20 WFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT 99 (345)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEE
Confidence 78999999999999886 6899999999999999999999999998876 4567
Q ss_pred EeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCe---eeEee---cCCceeEEEcCCC--cEEEEcCCcEEEEcC
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE---VLQTL---TGHAKTLDFSQKG--LLAVGTGSFAQILGD 175 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~---~~~~~---~~~v~~~~~s~~g--l~~~~~d~~i~v~d~ 175 (359)
.+.+|...|++++|+|++++|++++.|++|++||+..+. ++..+ ...|.+++|+|++ +++++.|+.|++||+
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 888999999999999999999999999999999998753 34444 3458999999999 788889999999996
Q ss_pred CCCCc-cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 176 FSGSH-NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
..... ....+.+|. ..|++++|+|+|.+|++|+.||.++||.
T Consensus 180 ~~~~~~~~~~~~~h~----~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 180 EEDDWVCCATLEGHE----STVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp ETTEEEEEEEECCCS----SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCEEEEEEecCCC----CceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 54321 223445554 3899999999999999999999999985
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=3.5e-27 Score=216.08 Aligned_cols=164 Identities=18% Similarity=0.228 Sum_probs=137.3
Q ss_pred eEEEECCCCCEEEEecc---------------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTT 98 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~ 98 (359)
.+++|+|||++|++++. .|.+++|+|++ .|++|+.||+|+|||+.+
T Consensus 34 ~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~ 112 (344)
T 4gqb_B 34 EAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDE 112 (344)
T ss_dssp EEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECT
T ss_pred EEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccC
Confidence 89999999999998864 58999999985 788999999999999999
Q ss_pred CcceEE----eecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC---cEEEEcCC
Q 040274 99 SALLIK----MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG---LLAVGTGS 168 (359)
Q Consensus 99 ~~~~~~----~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g---l~~~~~d~ 168 (359)
++.+.. +.+|.+.|++++|+|+|++|++|+.|++|++||+.+++++.++. +.|++++|+|++ +++++.|+
T Consensus 113 ~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~ 192 (344)
T 4gqb_B 113 NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDN 192 (344)
T ss_dssp TSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccc
Confidence 876544 34899999999999999999999999999999999999999885 458999999988 67888999
Q ss_pred cEEEEcCCCCCccccccccccCCCCcceeEEEEccC-CCEEEEEeCCCeEEE
Q 040274 169 FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY-EDVLGIGHSMGWSGI 219 (359)
Q Consensus 169 ~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~g~~dg~~~i 219 (359)
+|++||+... .....+..+. ++..+.+++|+|+ +.+|++|+.||.+++
T Consensus 193 ~v~iwd~~~~-~~~~~~~~~~--~~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 193 RILLWDTRCP-KPASQIGCSA--PGYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp CEEEEETTSS-SCEEECC------CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred cccccccccc-ceeeeeecce--eeccceeeeecCCCCcceEEeccCCcEEE
Confidence 9999997655 3333332221 3346899999995 568899999998877
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=2.7e-27 Score=216.83 Aligned_cols=167 Identities=13% Similarity=0.109 Sum_probs=142.7
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEE
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~ 104 (359)
.+++|+||+. |++|+. .|++++|+|++.+|++|+.||+|++||+.+++++..
T Consensus 86 ~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 86 ADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp EEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 8899999975 555554 689999999999999999999999999999999999
Q ss_pred eecCCCCeEEEEEecCC-CEEEEecCCCeEEEEEcCCCeeeEeec-----CCceeEEEcCCC---cEEEEcCCcEEEEcC
Q 040274 105 MLYHQGPVSALAFHPNG-HLMATTGKECKIKIWDLRKYEVLQTLT-----GHAKTLDFSQKG---LLAVGTGSFAQILGD 175 (359)
Q Consensus 105 ~~~h~~~v~~l~~~p~g-~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~v~~~~~s~~g---l~~~~~d~~i~v~d~ 175 (359)
+.+|.+.|++++|+|++ .+|++++.|++|++||+++++++..+. ..+.+++|+|++ +++++.|+.|+|||+
T Consensus 165 ~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 165 YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 99999999999999987 478999999999999999998877762 247899999976 566788999999997
Q ss_pred CCCCccccccccccCCCCcceeEEEEccCC-CEEEEEeCCCeEEEEEcCC
Q 040274 176 FSGSHNYSRYMGNSMVKGYQIGKVSFRPYE-DVLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~g~~dg~~~i~~~gs 224 (359)
... ..+..+..|.. .|++++|+|++ .+|++|+.||.++||....
T Consensus 245 ~~~-~~~~~~~~h~~----~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 245 KST-SCVLSSAVHSQ----CVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp CC---CCEEEECCSS----CEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred CCC-cEEEEEcCCCC----CEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 654 56666666654 89999999998 6899999999999975543
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=1.4e-26 Score=208.54 Aligned_cols=165 Identities=15% Similarity=0.268 Sum_probs=146.5
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|+|+|++|++|+. .|.+++|+|++.+|++|+.||.|++||+.+++++..+.+|
T Consensus 27 ~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 106 (312)
T 4ery_A 27 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 106 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCC
Confidence 89999999999999876 7899999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYS 183 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~ 183 (359)
...|.+++|+|++.+|++++.|+.|++||+++++++..+. ..+.+++|+|+| +++++.|+.|++||+... ....
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~ 185 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLK 185 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-ceee
Confidence 9999999999999999999999999999999998888873 468999999999 788889999999997655 3333
Q ss_pred ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 184 RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 184 ~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
.+..+ +...+.+++|+|++.+|++++.||.+.+|
T Consensus 186 ~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 186 TLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLW 219 (312)
T ss_dssp EECCS---SCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred EEecc---CCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 33222 33479999999999999999999988774
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=6.7e-27 Score=219.29 Aligned_cols=169 Identities=14% Similarity=0.177 Sum_probs=151.8
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|+|+|++|++|+. .|.+++|+|++.+|++|+.|++|++||+.++.++..+.+|
T Consensus 154 ~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h 233 (410)
T 1vyh_C 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 233 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC
Confidence 88999999999999986 7999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCC--------------------C--cEE
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQK--------------------G--LLA 163 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~--------------------g--l~~ 163 (359)
...|.++.|+|+|.+|++|+.|++|++||+.++.+...+. ..|.+++|+|+ | +++
T Consensus 234 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 313 (410)
T 1vyh_C 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE
Confidence 9999999999999999999999999999999998888773 45899999995 5 788
Q ss_pred EEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 164 VGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 164 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
++.|+.|++||+..+ .....+.+|.. .|.+++|+|+|.+|++|+.||.+++|....+
T Consensus 314 gs~D~~i~iwd~~~~-~~~~~~~~h~~----~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 314 GSRDKTIKMWDVSTG-MCLMTLVGHDN----WVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EETTSEEEEEETTTT-EEEEEEECCSS----CEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred EeCCCeEEEEECCCC-ceEEEEECCCC----cEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 889999999997654 55566666644 8999999999999999999999999876544
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=8.3e-27 Score=211.53 Aligned_cols=170 Identities=15% Similarity=0.170 Sum_probs=152.2
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|+|++.++++++. .+.+++|+|++.+|++|+.||.|++|++.++.....+..|
T Consensus 84 ~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 84 VSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC
Confidence 88999999999999876 5778999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYS 183 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~ 183 (359)
...|.+++|+|+|.+|++++.|+.|++||+.+++++..+. ..|++++|+|++ +++++.|+.|++||+... ....
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~ 242 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAG 242 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-CEEE
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeE
Confidence 9999999999999999999999999999999999988884 458999999999 778888999999997554 4455
Q ss_pred ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 184 RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 184 ~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
.+..|.. .|.+++|+|++.+|++|+.||.+.+|....+.
T Consensus 243 ~~~~h~~----~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 243 TLSGHAS----WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp EECCCSS----CEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEcCCCC----ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 5566644 79999999999999999999999998766543
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=8.3e-27 Score=218.66 Aligned_cols=164 Identities=15% Similarity=0.191 Sum_probs=147.7
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
++++|+|++.+|++|+. .|++++|+|++.+|++|+.||+|++||+.++.++..+.+|
T Consensus 112 ~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 191 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191 (410)
T ss_dssp EEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCC
Confidence 89999999999999976 7999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecC---CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG---HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYS 183 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~ 183 (359)
...|++++|+|++.+|++|+.|++|++||++++.++.++.+ .+.++.|+|+| +++++.|+.|++||+... ....
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-~~~~ 270 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKA 270 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-ceee
Confidence 99999999999999999999999999999999999888844 48999999999 788889999999997554 4445
Q ss_pred ccccccCCCCcceeEEEEccC--------------------CCEEEEEeCCCeEEEE
Q 040274 184 RYMGNSMVKGYQIGKVSFRPY--------------------EDVLGIGHSMGWSGIL 220 (359)
Q Consensus 184 ~~~~~~~~~~~~v~~~~~sp~--------------------~~~l~~g~~dg~~~i~ 220 (359)
.+..|.. .|.+++|+|+ |.+|++|+.||.+.+|
T Consensus 271 ~~~~h~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iw 323 (410)
T 1vyh_C 271 ELREHRH----VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323 (410)
T ss_dssp EECCCSS----CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEE
T ss_pred EecCCCc----eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEE
Confidence 5555544 8999999996 6789999999998874
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.2e-26 Score=212.05 Aligned_cols=147 Identities=17% Similarity=0.266 Sum_probs=132.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.|.+++|+|++.+|++|+.||+|++||+.++.++..+.+|...|++++|+|++.+|++++.|++|++||+++++.+..+.
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999988877762
Q ss_pred -----CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 149 -----GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 149 -----~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
..+++++|+|+| +++++.|+.|++||+... .....+.+|.. .|.+++|+|+|.+|++|+.||.+.||
T Consensus 266 ~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 266 HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-DRAGVLAGHDN----RVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC-cEeeEeecCCC----cEEEEEEcCCCCEEEEEcCCccEEec
Confidence 258999999999 778888999999996554 45556666654 89999999999999999999988887
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=2.2e-26 Score=214.49 Aligned_cols=168 Identities=15% Similarity=0.234 Sum_probs=145.2
Q ss_pred eEEEECCCCCEEEEecc----------------------------------------ceeEEEEcCCCCEEEEEeCCCeE
Q 040274 52 ILWILPSSGRYMAVAGR----------------------------------------RTDLMRVNPFNGVVSLGHSGGTV 91 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------------------------~v~~l~~sp~~~~l~tg~~dg~v 91 (359)
++++|+|||++|++|+. .|.+++|+|++.+|++|+.||.|
T Consensus 68 ~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i 147 (393)
T 1erj_A 68 CCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLI 147 (393)
T ss_dssp CEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeE
Confidence 89999999999999864 17899999999999999999999
Q ss_pred EEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcC-CC--cEEEEc
Q 040274 92 TMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQ-KG--LLAVGT 166 (359)
Q Consensus 92 ~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~-~g--l~~~~~ 166 (359)
++||+.+++.+..+.+|...|++++|+|++.+|++++.|++|++||++++++...+ ...+.+++|+| +| +++++.
T Consensus 148 ~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 148 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999887766 56689999999 77 778889
Q ss_pred CCcEEEEcCCCCCcccccccc----ccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 167 GSFAQILGDFSGSHNYSRYMG----NSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 167 d~~i~v~d~~~~~~~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
|+.|++||+..+ .....+.. ..+ |...|++++|+|+|.+|++|+.||.+.+|.
T Consensus 228 d~~v~iwd~~~~-~~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 228 DRAVRVWDSETG-FLVERLDSENESGTG-HKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp TSCEEEEETTTC-CEEEEEC------CC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCcEEEEECCCC-cEEEeecccccCCCC-CCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 999999997654 33322210 011 344899999999999999999999988874
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=4.6e-26 Score=209.41 Aligned_cols=172 Identities=16% Similarity=0.217 Sum_probs=148.6
Q ss_pred eEEEECCCCCEEEEecc-----------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~ 102 (359)
.+++|+|+|.+|++|+. .|.+++|+|++..|++|+.||+|++||+.+++++
T Consensus 110 ~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 110 MACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp CEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 67899999999999875 4789999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEEEec--CCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcC
Q 040274 103 IKMLYHQGPVSALAFHP--NGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGD 175 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p--~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~ 175 (359)
..+.+|...|.+++|+| +|.+|++|+.|+.|++||+++++++..+. ..|++++|+|+| +++++.|++|++||+
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~ 269 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 269 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999999988 57899999999999999999999988884 458999999999 888899999999997
Q ss_pred CCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 176 FSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
... .....+..+. +...+.+++|+|+|.+|++|+.|+.+.+|....+.
T Consensus 270 ~~~-~~~~~~~~~~--~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 270 RAD-REVAIYSKES--IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp TTT-EEEEEECCTT--CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCC-cEEEEEcCCC--cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 654 3333333221 23368999999999999999999999999865543
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=3.8e-26 Score=210.26 Aligned_cols=180 Identities=17% Similarity=0.236 Sum_probs=141.4
Q ss_pred eEEEECCCCCEEEEecc---------------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTT 98 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~ 98 (359)
.+++|||||++|++|+. .|++++|+|++. +++++.||+|+|||+.+
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~ 124 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILE 124 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC----
T ss_pred EEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccc
Confidence 89999999999999863 589999999875 55678899999999988
Q ss_pred CcceE----EeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC---cEEEEcCC
Q 040274 99 SALLI----KMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG---LLAVGTGS 168 (359)
Q Consensus 99 ~~~~~----~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g---l~~~~~d~ 168 (359)
++.+. ...+|.+.|++++|+|++.+|++++.|+.|++||+.+++++..+. +.|++++|+|++ +++++.|+
T Consensus 125 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 125 KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp ----CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTS
T ss_pred cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCC
Confidence 76543 344899999999999999999999999999999999999988884 458999999987 67888999
Q ss_pred cEEEEcCCCCCccccccccccCCCCcceeEEEEccCC-CEEEEEeCCCeEEE----------------------------
Q 040274 169 FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE-DVLGIGHSMGWSGI---------------------------- 219 (359)
Q Consensus 169 ~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~g~~dg~~~i---------------------------- 219 (359)
.|++||+... .....+..+. +...+++++|+|++ .+|++|+.|+.+.+
T Consensus 205 ~v~~wd~~~~-~~~~~~~~~~--~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~ 281 (357)
T 4g56_B 205 RILLWDTRKP-KPATRIDFCA--SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHS 281 (357)
T ss_dssp CEEECCTTSS-SCBCBCCCTT--CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSS
T ss_pred ceEEEECCCC-ceeeeeeecc--ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCC
Confidence 9999997665 3333222221 33479999999975 68899999998877
Q ss_pred ---EEcCCCCCceeeeccC
Q 040274 220 ---LVPRSSEPNFDSWVAN 235 (359)
Q Consensus 220 ---~~~gs~~~~~~~~~~~ 235 (359)
+++++.|+.+++|+++
T Consensus 282 ~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 282 SPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp SCCEEEEETTSCEEEECTT
T ss_pred CCEEEEEeCCCEEEEEECC
Confidence 3556667888888764
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=7.6e-26 Score=207.94 Aligned_cols=164 Identities=15% Similarity=0.221 Sum_probs=145.3
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCcceEEee
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNP--FNGVVSLGHSGGTVTMWKPTTSALLIKML 106 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp--~~~~l~tg~~dg~v~lwd~~~~~~~~~~~ 106 (359)
.++.|+|++.+|++++. .|.+++|+| ++.+|++|+.||.|++||+.+++++..+.
T Consensus 158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 78999999999999876 688999988 46899999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec-----CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCC
Q 040274 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT-----GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGS 179 (359)
Q Consensus 107 ~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~ 179 (359)
+|...|++++|+|++.+|++++.|++|++||++++..+..+. ..+++++|+|+| +++++.|+.|++||+..+
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~- 316 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG- 316 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC-
Confidence 999999999999999999999999999999999988776662 246899999999 777888999999997554
Q ss_pred ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 180 HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
.....+.+|.. .|++++|+|+|.+|++|+.||.+++|
T Consensus 317 ~~~~~l~~h~~----~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 317 SRVSILFGHEN----RVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp SEEEEECCCSS----CEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ceEEEEECCCC----cEEEEEECCCCCEEEEEcCCCCEEec
Confidence 44555666644 89999999999999999999988887
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=3.7e-26 Score=210.30 Aligned_cols=169 Identities=13% Similarity=0.112 Sum_probs=145.0
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEe
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKM 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~ 105 (359)
++++|+|++.+|+.+.. .|++++|+|++.+|++|+.||.|++||+.+++++..+
T Consensus 98 ~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 98 TDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp EEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 89999999988876654 6899999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEecCCC-EEEEecCCCeEEEEEcCCCeeeEee-----cCCceeEEEcCCC---cEEEEcCCcEEEEcCC
Q 040274 106 LYHQGPVSALAFHPNGH-LMATTGKECKIKIWDLRKYEVLQTL-----TGHAKTLDFSQKG---LLAVGTGSFAQILGDF 176 (359)
Q Consensus 106 ~~h~~~v~~l~~~p~g~-~l~s~~~d~~i~vwd~~~~~~~~~~-----~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~ 176 (359)
.+|...|++++|+|++. ++++++.|+.|++||+++++++..+ ...+++++|+|++ +++++.|+.|++||+.
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 99999999999999874 7899999999999999998876655 3457999999986 5567789999999975
Q ss_pred CCCccccccccccCCCCcceeEEEEccCC-CEEEEEeCCCeEEEEEcCCC
Q 040274 177 SGSHNYSRYMGNSMVKGYQIGKVSFRPYE-DVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~g~~dg~~~i~~~gs~ 225 (359)
.. .....+..|.. .|++++|+|++ .+|++|+.||.++||...++
T Consensus 258 ~~-~~~~~~~~~~~----~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 258 NP-DSAQTSAVHSQ----NITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp CG-GGCEEECCCSS----CEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred CC-cEeEEEeccce----eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 54 55555655544 89999999987 68999999999999865433
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.3e-25 Score=205.12 Aligned_cols=165 Identities=15% Similarity=0.230 Sum_probs=144.7
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----ceEE
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA----LLIK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~----~~~~ 104 (359)
++++|+|||++|++|+. .|.+++|+|++.+|++|+.|+.|++|++.++. ....
T Consensus 59 ~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~ 138 (340)
T 1got_B 59 YAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138 (340)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEE
Confidence 89999999999999986 58899999999999999999999999998753 4556
Q ss_pred eecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCC
Q 040274 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGS 179 (359)
Q Consensus 105 ~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~ 179 (359)
+.+|.+.|.++.|++++. +++++.|++|++||+.+++++..+. +.|.+++|+|++ +++++.|+.|++||+...
T Consensus 139 ~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~- 216 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG- 216 (340)
T ss_dssp EECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-
T ss_pred ecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-
Confidence 779999999999998874 8899999999999999999988884 458999999999 778889999999997654
Q ss_pred ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 180 HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
.....+..|.. .|++++|+|++.+|++|+.||.+++|..
T Consensus 217 ~~~~~~~~h~~----~v~~v~~~p~~~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 217 MCRQTFTGHES----DINAICFFPNGNAFATGSDDATCRLFDL 255 (340)
T ss_dssp SEEEEECCCSS----CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEEcCCcC----CEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 45555666644 7999999999999999999999988754
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=1.2e-25 Score=208.51 Aligned_cols=156 Identities=17% Similarity=0.181 Sum_probs=128.2
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCeEEEEeCC-CCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNP-FNGVVSLGHSGGTVTMWKPT-TSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~-~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.|.+++|+| ++.+|++|+.||+|++||++ ++.++..+.+|.+.|++++|+|++.+|++|+.|++|++||++++..+..
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 467788877 78899999999999999997 4577888999999999999999999999999999999999999998877
Q ss_pred ecC----------CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 147 LTG----------HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 147 ~~~----------~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
+.. .+++++|+|+| +++++.|+.|++||+... .....+......|...|++++|+|+|.+|++|+.|
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~-~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA-EMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC-CEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC-ceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 722 27899999999 777778999999997554 33322211101144589999999999999999999
Q ss_pred CeEEEEEcCCC
Q 040274 215 GWSGILVPRSS 225 (359)
Q Consensus 215 g~~~i~~~gs~ 225 (359)
|.+.||.....
T Consensus 366 ~~i~iW~~~~~ 376 (380)
T 3iz6_a 366 KNLKIWAFSGH 376 (380)
T ss_dssp SCEEEEECCSS
T ss_pred CCEEEEecCCC
Confidence 98888876543
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=2.8e-25 Score=203.36 Aligned_cols=172 Identities=14% Similarity=0.185 Sum_probs=140.8
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---ceE
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA---LLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~---~~~ 103 (359)
.+++|+|+|++|++|+. .|.+++|+|++.+|++|+.|++|++||+.++. ++.
T Consensus 65 ~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 144 (345)
T 3fm0_A 65 RKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS 144 (345)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEE
Confidence 89999999999999885 68999999999999999999999999998763 456
Q ss_pred EeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCe--eeEee---cCCceeEEEcCCC--cEEEEcCCcEEEEcCC
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE--VLQTL---TGHAKTLDFSQKG--LLAVGTGSFAQILGDF 176 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~--~~~~~---~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~ 176 (359)
.+.+|...|.+++|+|++.+|++++.|+.|++||+..+. ++.++ .+.|++++|+|+| +++++.|++|+|||..
T Consensus 145 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 145 VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 677999999999999999999999999999999998875 34455 3468999999999 8888999999999953
Q ss_pred CCCcccc-----------ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 177 SGSHNYS-----------RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 177 ~~~~~~~-----------~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
....... .+......+...|.+++|+|++..|++++.|+.+++|...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 225 LPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp CTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred cCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 3211110 0001111144579999999999999999999988888654
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=2.8e-25 Score=199.66 Aligned_cols=150 Identities=13% Similarity=0.144 Sum_probs=134.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.|++++|+|++.+|++|+.||+|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++||+.+++++..+.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999888884
Q ss_pred ---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEcc-CCCEEEEEeCCCeEEEEEc
Q 040274 149 ---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP-YEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 149 ---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~g~~dg~~~i~~~ 222 (359)
+.|++++|+|++ +++++.|++|++||+.........+..|.. .|.+++|+| ++.+|++|+.||.+.+|..
T Consensus 95 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~----~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH----FVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS----CEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC----cEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 458999999999 888999999999997655444455556644 899999999 6789999999999888654
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=1.1e-24 Score=197.26 Aligned_cols=168 Identities=11% Similarity=0.182 Sum_probs=145.9
Q ss_pred eEEEECCCC-CEEEEecc----------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce
Q 040274 52 ILWILPSSG-RYMAVAGR----------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL 102 (359)
Q Consensus 52 ~~l~~spdg-~~l~~~~~----------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~ 102 (359)
++++|+|++ ++|++|+. .|.+++|+|++.+|++|+.|++|++||+.+++++
T Consensus 21 ~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 21 TSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee
Confidence 889999965 88998876 6889999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCC------C--cEEEEcCCcEE
Q 040274 103 IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQK------G--LLAVGTGSFAQ 171 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~------g--l~~~~~d~~i~ 171 (359)
..+.+|...|.+++|+|++.+|++++.|++|++||++ +.++..+ ...+.++.|+|. + +++++.|+.|+
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 179 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEE
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEE
Confidence 9999999999999999999999999999999999997 4555555 345889999884 3 78889999999
Q ss_pred EEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 172 ILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 172 v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
+||+... .....+.+|.. .|.+++|+|+|.+|++|+.||.+++|....+
T Consensus 180 ~wd~~~~-~~~~~~~~h~~----~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 180 AWNLNQF-QIEADFIGHNS----NINTLTASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEETTTT-EEEEEECCCCS----CEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred EEECCcc-hhheeecCCCC----cEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 9997543 44445555644 8999999999999999999999999976554
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=5.4e-25 Score=205.06 Aligned_cols=170 Identities=14% Similarity=0.222 Sum_probs=143.4
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|+|||++|++|+. .|.+++|+|++.+|++|+.|++|++||+.++.+...+. +
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~ 205 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-I 205 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-C
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-c
Confidence 68999999999999886 69999999999999999999999999999998877764 5
Q ss_pred CCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCeeeEee----------cCCceeEEEcCCC--cEEEEcCCcEEEEcC
Q 040274 109 QGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYEVLQTL----------TGHAKTLDFSQKG--LLAVGTGSFAQILGD 175 (359)
Q Consensus 109 ~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~~~~~~----------~~~v~~~~~s~~g--l~~~~~d~~i~v~d~ 175 (359)
...+.+++|+| ++.+|++++.|+.|++||++++..+..+ ...|++++|+|+| +++++.|+.|++||+
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 67799999999 8999999999999999999998877665 2358999999999 888889999999997
Q ss_pred CCCCc-----------cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 176 FSGSH-----------NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 176 ~~~~~-----------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
..... ....+.+|. ..|.+++|+|++.+|++|+.||.+.+|...++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHK----DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp ---------------CEEEEEECCS----SCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCcccccCCCCCcceEEEeccc----CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 64321 122334443 379999999999999999999999998765544
No 22
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=8.8e-25 Score=204.44 Aligned_cols=177 Identities=12% Similarity=0.155 Sum_probs=149.5
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
....|+|+|++|++|+. .|++++|+|++.+|++|+.||.|++||+.+++.+..+.+|
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 44468999999999876 7999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---------------------------CCceeEEEcCCC-
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---------------------------GHAKTLDFSQKG- 160 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---------------------------~~v~~~~~s~~g- 160 (359)
.+.|++++|+|++.+|++++.|+.|++||+++++++..+. ..+.+++|+|+|
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 9999999999999999999999999999999998887773 335567778999
Q ss_pred -cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCC-EEEEEeCCCeEEEEEcCCCCCceeee
Q 040274 161 -LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED-VLGIGHSMGWSGILVPRSSEPNFDSW 232 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~~dg~~~i~~~gs~~~~~~~~ 232 (359)
+++++.|+.|++||+............| ...|++++|+|++. +|++|+.||.+.+|....+...+..+
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKEQTIQLPSKF----TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCTT----SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred EEEEEcCCCeEEEEECCCCceeEEccccc----CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhh
Confidence 7788889999999976654333333333 34899999999999 99999999999997766554433333
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=3.7e-24 Score=195.65 Aligned_cols=166 Identities=14% Similarity=0.178 Sum_probs=141.6
Q ss_pred eEEEE-----CC-CCCEEEEecc------------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEe
Q 040274 52 ILWIL-----PS-SGRYMAVAGR------------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWK 95 (359)
Q Consensus 52 ~~l~~-----sp-dg~~l~~~~~------------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd 95 (359)
++++| ++ ||.+|++|+. .|++++|+|++.+|++|+.|++|++||
T Consensus 25 ~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd 104 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWD 104 (343)
T ss_dssp EEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEE
T ss_pred hheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 78888 66 9999999886 588999999999999999999999999
Q ss_pred CCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee-----cCCceeEEEcCCC----------
Q 040274 96 PTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-----TGHAKTLDFSQKG---------- 160 (359)
Q Consensus 96 ~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~-----~~~v~~~~~s~~g---------- 160 (359)
+.+++.+..+.+|...|++++|+|++.+|++++.|++|++||+......... ...+.+++|+|++
T Consensus 105 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 184 (343)
T 2xzm_R 105 LRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFA 184 (343)
T ss_dssp TTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSC
T ss_pred CCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCC
Confidence 9999999999999999999999999999999999999999999843322221 3458999999974
Q ss_pred --cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 161 --LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 161 --l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+++++.|+.|++||. .. .....+..|.. .|.+++|+|+|.+|++|+.||.+.+|...
T Consensus 185 ~~l~s~~~d~~i~iwd~-~~-~~~~~~~~h~~----~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 185 PYFASVGWDGRLKVWNT-NF-QIRYTFKAHES----NVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CEEEEEETTSEEEEEET-TT-EEEEEEECCSS----CEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred CEEEEEcCCCEEEEEcC-CC-ceeEEEcCccc----cceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 788889999999993 32 34444555543 89999999999999999999999998763
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=2.3e-24 Score=193.05 Aligned_cols=170 Identities=13% Similarity=0.182 Sum_probs=140.8
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCc--ce
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNP--FNGVVSLGHSGGTVTMWKPTTSA--LL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp--~~~~l~tg~~dg~v~lwd~~~~~--~~ 102 (359)
++++|+|+|++|++|+. .|++++|+| ++.+|++|+.||+|++||+.++. .+
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~ 92 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI 92 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence 78999999999999886 789999986 38899999999999999998874 56
Q ss_pred EEeecCCCCeEEEEEecC--CCEEEEecCCCeEEEEEcCCCee--eEee---cCCceeEEEcCC-------------C--
Q 040274 103 IKMLYHQGPVSALAFHPN--GHLMATTGKECKIKIWDLRKYEV--LQTL---TGHAKTLDFSQK-------------G-- 160 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~--g~~l~s~~~d~~i~vwd~~~~~~--~~~~---~~~v~~~~~s~~-------------g-- 160 (359)
..+.+|...|.+++|+|+ |.+|++++.|+.|++||++++.. ...+ ...|.+++|+|+ +
T Consensus 93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCE
T ss_pred EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcce
Confidence 677889999999999997 89999999999999999987632 2233 456899999996 4
Q ss_pred cEEEEcCCcEEEEcCCCCCc---cccccccccCCCCcceeEEEEccCC---CEEEEEeCCCeEEEEEcCCC
Q 040274 161 LLAVGTGSFAQILGDFSGSH---NYSRYMGNSMVKGYQIGKVSFRPYE---DVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 161 l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~v~~~~~sp~~---~~l~~g~~dg~~~i~~~gs~ 225 (359)
+++++.|+.|++||+..... ....+.+|. ..|.+++|+|++ .+|++|+.|+.+.||.....
T Consensus 173 l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~----~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 173 FVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEEETTSCEEEEEEETTTTEEEEEEEECCCS----SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEcCCCcEEEEEEcCCCceEEEEEEecCCC----CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 78888999999999755432 223444554 389999999985 89999999999999976543
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=5.6e-24 Score=192.32 Aligned_cols=170 Identities=16% Similarity=0.159 Sum_probs=150.3
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML 106 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~ 106 (359)
.+++|+|+|++|++++. .|.+++|+|++.+|++++.||.|++||+.+++.+..+.
T Consensus 101 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~ 180 (337)
T 1gxr_A 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180 (337)
T ss_dssp EEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee
Confidence 88999999999999875 68999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccc
Q 040274 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNY 182 (359)
Q Consensus 107 ~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~ 182 (359)
.|...|.+++|+|++.+|++++.|+.|++||+++++.+..+ ...+.+++|+|+| +++++.++.|++||+.... .
T Consensus 181 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--~ 258 (337)
T 1gxr_A 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--K 258 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--E
T ss_pred cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--e
Confidence 99999999999999999999999999999999999887776 5678999999999 7777889999999976542 2
Q ss_pred cccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCCC
Q 040274 183 SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEP 227 (359)
Q Consensus 183 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~ 227 (359)
..+..|. ..|.+++|+|++.+|++++.||.+.+|....+..
T Consensus 259 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 259 YQLHLHE----SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEECCCS----SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEcCCc----cceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 2334443 4899999999999999999999999988765543
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=4.1e-24 Score=192.32 Aligned_cols=173 Identities=21% Similarity=0.249 Sum_probs=146.3
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|+|+|++|++|+. .|.+++|+|++.+|++|+.||.|++||+.++.++..+..|
T Consensus 69 ~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 148 (312)
T 4ery_A 69 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 148 (312)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC
Confidence 89999999999999876 6899999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee----cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL----TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNY 182 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~ 182 (359)
..+|.+++|+|++.+|++++.|+.|++||+++++.+..+ ...+.+++|+|++ +++++.|+.|++||+... ...
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~ 227 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCL 227 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEE
Confidence 999999999999999999999999999999999887776 2457899999999 788888999999997554 455
Q ss_pred cccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 183 SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 183 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
..+..|.. ....+......+++.+|++|+.||.+.+|....+.
T Consensus 228 ~~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 228 KTYTGHKN-EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEECSSCC-SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EEEEecCC-ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 55555543 11223333344678999999999999998765543
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=6.9e-24 Score=192.27 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=130.0
Q ss_pred ceeEEEEcCCC--CEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFN--GVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~--~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+.+++|++++ .++++++.|+.|++||+.++..+..+.+|.+.|++++|+|++.+|++|+.|+.|++||+++..++..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 67888888754 5788999999999999999999999999999999999999999999999999999999999998888
Q ss_pred e--cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCcccccccc------ccCCCCcceeEEEEccCCCEEEEEeCCCeE
Q 040274 147 L--TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMG------NSMVKGYQIGKVSFRPYEDVLGIGHSMGWS 217 (359)
Q Consensus 147 ~--~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~ 217 (359)
+ ...+.+++|+|++ +++++.|+.|++||+... .....+.. ... +...|++++|+|+|++|++|+.||.+
T Consensus 253 ~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 253 LDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGK-IIVDELKQEVISTSSKA-EPPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp EECSSCEEEEEECSSSSEEEEEETTEEEEEETTTT-EEEEEECCC-------C-CCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred ecCCceEEeeecCCCCceeeccCCCEEEEEECCCC-eEEEeccccceeeeccC-CCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 8 4568999999999 889999999999996543 22221111 111 34479999999999999999999999
Q ss_pred EEEEcCCC
Q 040274 218 GILVPRSS 225 (359)
Q Consensus 218 ~i~~~gs~ 225 (359)
+||...+|
T Consensus 331 ~iW~~~tG 338 (340)
T 4aow_A 331 RVWQVTIG 338 (340)
T ss_dssp EEEEEEC-
T ss_pred EEEeCCCc
Confidence 99876554
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=3.5e-24 Score=210.94 Aligned_cols=170 Identities=15% Similarity=0.114 Sum_probs=145.0
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCcceEEe
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNG-VVSLGHSGGTVTMWKPTTSALLIKM 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~-~l~tg~~dg~v~lwd~~~~~~~~~~ 105 (359)
.+++|+|||++|++++. .|++++|+|++. .|++|+.|++|++||..+++++..+
T Consensus 107 ~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l 186 (611)
T 1nr0_A 107 KDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF 186 (611)
T ss_dssp EEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee
Confidence 89999999999998652 689999999986 6999999999999999999889999
Q ss_pred ecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec----------CCceeEEEcCCC--cEEEEcCCcEEEE
Q 040274 106 LYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT----------GHAKTLDFSQKG--LLAVGTGSFAQIL 173 (359)
Q Consensus 106 ~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~----------~~v~~~~~s~~g--l~~~~~d~~i~v~ 173 (359)
.+|...|++++|+|+|.+|++++.|++|++||+.+++++..+. +.|.+++|+|+| +++++.|++|++|
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 266 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 9999999999999999999999999999999999988877662 348999999999 8889999999999
Q ss_pred cCCCCCcccccc----------------------------------------ccccCCCCcceeEEEEccCCCEEEEEeC
Q 040274 174 GDFSGSHNYSRY----------------------------------------MGNSMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 174 d~~~~~~~~~~~----------------------------------------~~~~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
|+.... ....+ ....+ |...|++++|+|+|.+|++|+.
T Consensus 267 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 267 NVATLK-VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp ETTTTE-EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEET
T ss_pred eCCCCc-eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEEEEEeC
Confidence 976532 11111 00111 4458999999999999999999
Q ss_pred CCeEEEEEcC
Q 040274 214 MGWSGILVPR 223 (359)
Q Consensus 214 dg~~~i~~~g 223 (359)
|+.+++|...
T Consensus 345 D~~v~~Wd~~ 354 (611)
T 1nr0_A 345 EGHINSWDIS 354 (611)
T ss_dssp TSCEEEEETT
T ss_pred CCcEEEEECC
Confidence 9999998754
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=6.5e-25 Score=203.58 Aligned_cols=168 Identities=14% Similarity=0.210 Sum_probs=144.7
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-------c
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA-------L 101 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~-------~ 101 (359)
++++|+|+|++|++|+. .|.+++|+|++.+|++|+.|+.|++||+.+.. .
T Consensus 70 ~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~ 149 (380)
T 3iz6_a 70 YSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPV 149 (380)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccc
Confidence 99999999999999987 68899999999999999999999999987532 3
Q ss_pred eEEeecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEee-----c---CCceeEEEcC-CC--cEEEEcCCc
Q 040274 102 LIKMLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQTL-----T---GHAKTLDFSQ-KG--LLAVGTGSF 169 (359)
Q Consensus 102 ~~~~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~~-----~---~~v~~~~~s~-~g--l~~~~~d~~ 169 (359)
...+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+ . ..+.+++|++ ++ +++++.|+.
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 4567799999999999996 457999999999999999999887766 2 3478999987 55 888999999
Q ss_pred EEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 170 AQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 170 i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
|++||+.........+.+|.. .|++++|+|++.+|++|+.||.+++|...
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~----~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEG----DINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSS----CCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred EEEEECCCCCcceEEECCcCC----CeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 999998755566666777754 89999999999999999999999998654
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.9e-24 Score=194.50 Aligned_cols=165 Identities=16% Similarity=0.241 Sum_probs=131.7
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC------
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTT------ 98 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~------ 98 (359)
++++|+|+ +|++|+. .|.+++|+|++.+|++|+.|++|++||+..
T Consensus 18 ~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~ 95 (330)
T 2hes_X 18 WSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF 95 (330)
T ss_dssp EEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C
T ss_pred eeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc
Confidence 77778776 6776654 588999999999999999999999999853
Q ss_pred -CcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC----CeeeEeec---CCceeEEEcCCC--cEEEEcCC
Q 040274 99 -SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK----YEVLQTLT---GHAKTLDFSQKG--LLAVGTGS 168 (359)
Q Consensus 99 -~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~----~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~ 168 (359)
..++..+.+|...|++++|+|+|.+|++|+.|++|++||++. .+++..+. ..|.+++|+|++ +++++.|+
T Consensus 96 ~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 175 (330)
T 2hes_X 96 EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD 175 (330)
T ss_dssp CCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 345677889999999999999999999999999999999953 24555553 458999999999 88888999
Q ss_pred cEEEEcCCCCC-ccccccccccCCCCcceeEEEEccC--CCEEEEEeCCCeEEEEEc
Q 040274 169 FAQILGDFSGS-HNYSRYMGNSMVKGYQIGKVSFRPY--EDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 169 ~i~v~d~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~g~~dg~~~i~~~ 222 (359)
+|++||+.... .....+.+|.. .|.+++|+|+ +.+|++|+.|+.+++|..
T Consensus 176 ~i~iW~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 176 TVRIWKDYDDDWECVAVLNGHEG----TVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp CEEEEEEETTEEEEEEEECCCSS----CEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred eEEEEECCCCCeeEEEEccCCCC----cEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 99999965432 23445555644 8999999999 678999999999998864
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=4.7e-24 Score=194.95 Aligned_cols=170 Identities=21% Similarity=0.267 Sum_probs=139.5
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCC----------CEEEEEeCCCeEEEEeC
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFN----------GVVSLGHSGGTVTMWKP 96 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~----------~~l~tg~~dg~v~lwd~ 96 (359)
++++|+|+|++|++++. .|.+++|+|++ .+|++|+.||.|++||.
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 201 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT 201 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC
Confidence 89999999999999875 47899999986 79999999999999994
Q ss_pred CCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC-CeeeEee--cCCceeEEEcCCC-cEEEEcCCcEEE
Q 040274 97 TTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK-YEVLQTL--TGHAKTLDFSQKG-LLAVGTGSFAQI 172 (359)
Q Consensus 97 ~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~-~~~~~~~--~~~v~~~~~s~~g-l~~~~~d~~i~v 172 (359)
+......+.+|...|++++|+|+|.+|++|+.|+.|++||+.. ..+...+ ...|.+++|+|++ +++++.|+.|++
T Consensus 202 -~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~i 280 (343)
T 2xzm_R 202 -NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKI 280 (343)
T ss_dssp -TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEE
T ss_pred -CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEE
Confidence 4566778889999999999999999999999999999999954 3444444 4568999999999 888889999999
Q ss_pred EcCCCCCccc-cccc--------cccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 173 LGDFSGSHNY-SRYM--------GNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 173 ~d~~~~~~~~-~~~~--------~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
||+....... ..+. ...+ +...|++++|+|+|.+|++|+.||.+++|...
T Consensus 281 w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 281 FNLMTQSKAPVCTIEAEPITKAEGQKG-KNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EESSSCCSCSEEECCCCSGGGBTTBCC-SCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred EEeCCCCCCceEEeecCcchhhhhhcC-CCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 9976542211 0111 0111 34479999999999999999999998888653
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.3e-24 Score=196.04 Aligned_cols=168 Identities=15% Similarity=0.271 Sum_probs=136.3
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC--cce
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTS--ALL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~--~~~ 102 (359)
.+++|+|+|++|++|+. .|.+++|+|++.+|++|+.|++|++||+.++ .++
T Consensus 111 ~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 111 KGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 89999999999999875 5889999999999999999999999998776 677
Q ss_pred EEeecCCCCeEEEEEecC--CCEEEEecCCCeEEEEEcCCC--------eeeEee----cCCceeEEEcCCC-cEEEEcC
Q 040274 103 IKMLYHQGPVSALAFHPN--GHLMATTGKECKIKIWDLRKY--------EVLQTL----TGHAKTLDFSQKG-LLAVGTG 167 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~--g~~l~s~~~d~~i~vwd~~~~--------~~~~~~----~~~v~~~~~s~~g-l~~~~~d 167 (359)
..+.+|.+.|.+++|+|+ +.+|++++.|++|++||+..+ .+...+ ...|.+++|++++ +++++.|
T Consensus 191 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d 270 (330)
T 2hes_X 191 AVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGAD 270 (330)
T ss_dssp EEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETT
T ss_pred EEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCC
Confidence 888999999999999998 778999999999999999764 334443 3458999999888 8899999
Q ss_pred CcEEEEcCCCCCc-ccc-ccccccCCCCcceeEEEEcc--CCCEEEEEeCCCeEEEEEc
Q 040274 168 SFAQILGDFSGSH-NYS-RYMGNSMVKGYQIGKVSFRP--YEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 168 ~~i~v~d~~~~~~-~~~-~~~~~~~~~~~~v~~~~~sp--~~~~l~~g~~dg~~~i~~~ 222 (359)
+.|+|||...+.. ... ....| ....|.+++|+| ++.+|++|+.||.++||..
T Consensus 271 g~v~iw~~~~~~~~~~~~~~~~h---~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 271 GVLAVYEEVDGEWKVFAKRALCH---GVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp SCEEEEEEETTEEEEEEEESCTT---TTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred CEEEEEEcCCCceEEEecccccc---ccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 9999999644311 111 11233 222699999999 7899999999998888754
No 33
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=2.7e-24 Score=198.43 Aligned_cols=165 Identities=10% Similarity=0.081 Sum_probs=132.1
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceE--Ee
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLI--KM 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~--~~ 105 (359)
.+++|||||++|++++. .|.+++|+|+|.+|++++.+ .+.+|+..++..+. ..
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTD 215 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECC
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeec
Confidence 47999999999876542 79999999999999999865 55666666666543 34
Q ss_pred ecCCCCeEEEEEecCCCEEEEecCCC----eEEEEEcCCCee----eEee---cCCceeEEEcCCC--cEEEEcCCcEEE
Q 040274 106 LYHQGPVSALAFHPNGHLMATTGKEC----KIKIWDLRKYEV----LQTL---TGHAKTLDFSQKG--LLAVGTGSFAQI 172 (359)
Q Consensus 106 ~~h~~~v~~l~~~p~g~~l~s~~~d~----~i~vwd~~~~~~----~~~~---~~~v~~~~~s~~g--l~~~~~d~~i~v 172 (359)
..|...|.+++|+|++.++++++.|+ .+++||+..... ...+ ...|++++|||+| +++++.|++|+|
T Consensus 216 ~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 216 FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 47889999999999999999999887 688999877643 2233 3458999999999 777889999999
Q ss_pred EcCCCCCccccc-cccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 173 LGDFSGSHNYSR-YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 173 ~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
||+.+. ..+.. ..+|.. .|++++|+|||++|++|+.|++++||.-
T Consensus 296 wd~~~~-~~~~~~~~gH~~----~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 296 VKLKDL-SMSKIFKQAHSF----AITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EETTTT-EEEEEETTSSSS----CEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred EECCCC-cEEEEecCcccC----CEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 997655 44444 345654 8999999999999999999998887754
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=4.3e-24 Score=208.01 Aligned_cols=162 Identities=20% Similarity=0.325 Sum_probs=143.5
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~ 109 (359)
.+++|+|||++|++++. .|++++|+|++.+|++++.|+.|++||. ++..+..+.+|.
T Consensus 389 ~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~ 467 (577)
T 2ymu_A 389 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHS 467 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCC
Confidence 78999999999999875 7899999999999999999999999996 467788899999
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccc
Q 040274 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSR 184 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~ 184 (359)
..|++++|+|++.+|++++.|+.|++||. +++++..+. +.|++++|+|+| +++++.|+.|+|||. . +.....
T Consensus 468 ~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~-~~~~~~ 544 (577)
T 2ymu_A 468 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N-GQLLQT 544 (577)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T-SCEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C-CCEEEE
Confidence 99999999999999999999999999995 577777774 458999999999 778889999999994 3 355666
Q ss_pred cccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 185 YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 185 ~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+.+|.. .|++++|+|||++|++++.|+.+.+|.
T Consensus 545 ~~~h~~----~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 545 LTGHSS----SVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EECCSS----CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCC----CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 667754 899999999999999999999888773
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=6.3e-24 Score=209.07 Aligned_cols=168 Identities=10% Similarity=0.208 Sum_probs=137.2
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc--eEE---
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSAL--LIK--- 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~--~~~--- 104 (359)
++++|+|||++|++++. .|++++|+|+|.+|++|+.||+|+|||+.++.. ...
T Consensus 22 ~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~ 101 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPV 101 (611)
T ss_dssp CCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEEC
T ss_pred eEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecc
Confidence 88999999999999875 799999999999999999999999999864322 122
Q ss_pred -----------------------------------------eecCCCCeEEEEEecCCC-EEEEecCCCeEEEEEcCCCe
Q 040274 105 -----------------------------------------MLYHQGPVSALAFHPNGH-LMATTGKECKIKIWDLRKYE 142 (359)
Q Consensus 105 -----------------------------------------~~~h~~~v~~l~~~p~g~-~l~s~~~d~~i~vwd~~~~~ 142 (359)
+.+|...|++++|+|++. .|++++.|++|++||..+++
T Consensus 102 ~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 102 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 234666677777777765 58899999999999999988
Q ss_pred eeEeecC---CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccc-------cccCCCCcceeEEEEccCCCEEEE
Q 040274 143 VLQTLTG---HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYM-------GNSMVKGYQIGKVSFRPYEDVLGI 210 (359)
Q Consensus 143 ~~~~~~~---~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~~~~~~~v~~~~~sp~~~~l~~ 210 (359)
++.++.+ .|++++|+|+| +++++.|++|++||+..+ .....+. .| ...|.+++|+|+|.+|++
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g-~~~~~~~~~~~~~~~h----~~~V~~v~~spdg~~l~s 256 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG-TKTGVFEDDSLKNVAH----SGSVFGLTWSPDGTKIAS 256 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEECBCTTSSSCSS----SSCEEEEEECTTSSEEEE
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC-cEeeeecccccccccc----CCCEEEEEECCCCCEEEE
Confidence 8888854 58999999999 788899999999997554 3333331 34 348999999999999999
Q ss_pred EeCCCeEEEEEcCC
Q 040274 211 GHSMGWSGILVPRS 224 (359)
Q Consensus 211 g~~dg~~~i~~~gs 224 (359)
|+.|+.+++|...+
T Consensus 257 ~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 257 ASADKTIKIWNVAT 270 (611)
T ss_dssp EETTSEEEEEETTT
T ss_pred EeCCCeEEEEeCCC
Confidence 99999999997543
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.92 E-value=1.2e-23 Score=190.46 Aligned_cols=171 Identities=16% Similarity=0.193 Sum_probs=143.5
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCC------CCEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPF------NGVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~------~~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
++++|+|++.+|++|+. .|.++.|+|. +.+|++|+.|+.|++||+.+.....
T Consensus 111 ~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 190 (319)
T 3frx_A 111 MSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA 190 (319)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe
Confidence 89999999999999886 5788999985 4489999999999999999999889
Q ss_pred EeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCc
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSH 180 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~ 180 (359)
.+.+|...|++++|+|+|.+|++++.|+.|++||+.+++++..+ ...+.+++|+|++ +++++.++.+.+|++... .
T Consensus 191 ~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~-~ 269 (319)
T 3frx_A 191 DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQ-Y 269 (319)
T ss_dssp EECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTE-E
T ss_pred eecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC-e
Confidence 99999999999999999999999999999999999999988888 4568999999999 777777888999996432 2
Q ss_pred ccccccc----ccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 181 NYSRYMG----NSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 181 ~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
....+.. +...+...+.+++|+|+|++|++|+.||.+++|...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 270 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 2211111 111123468999999999999999999988888643
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.92 E-value=3.1e-24 Score=198.05 Aligned_cols=146 Identities=11% Similarity=0.128 Sum_probs=113.7
Q ss_pred eeEEEEcCCCCEEEEEe--CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 70 TDLMRVNPFNGVVSLGH--SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~--~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
+.+++|||||+++++++ .|++|+|||+.++.++..+. |.+.|++++|+|+|.+|++++.| .+.+|+..++..+...
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARK 213 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeee
Confidence 56899999999876554 78999999999999888874 78889999999999999999855 5677777777655433
Q ss_pred -----cCCceeEEEcCCC--cEEEEcCC----cEEEEcCCCCCccc---cccccccCCCCcceeEEEEccCCCEEEEEeC
Q 040274 148 -----TGHAKTLDFSQKG--LLAVGTGS----FAQILGDFSGSHNY---SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 148 -----~~~v~~~~~s~~g--l~~~~~d~----~i~v~d~~~~~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
...+.+++|+|+| +++++.++ .+.+|++....... ..+..| ...|++++|+|+|++|++|+.
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR----FKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS----CSCEEEEEECTTSCEEEEEET
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC----CCCeEeEEECCCCCceEEEcC
Confidence 2348999999999 67777765 57888864432211 223334 347999999999999999999
Q ss_pred CCeEEEEE
Q 040274 214 MGWSGILV 221 (359)
Q Consensus 214 dg~~~i~~ 221 (359)
|+.++||.
T Consensus 290 D~~V~iwd 297 (365)
T 4h5i_A 290 DNSIALVK 297 (365)
T ss_dssp TSCEEEEE
T ss_pred CCEEEEEE
Confidence 99988843
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.7e-24 Score=195.95 Aligned_cols=170 Identities=14% Similarity=0.195 Sum_probs=143.9
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--ce
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTSA--LL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~~--~~ 102 (359)
.+++|+|+|++|++|+. .|++++|+|+ +.+|++|+.||.|++||+.++. .+
T Consensus 15 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 94 (379)
T 3jrp_A 15 HDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI 94 (379)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEe
Confidence 89999999999999975 7999999987 8999999999999999999886 67
Q ss_pred EEeecCCCCeEEEEEecC--CCEEEEecCCCeEEEEEcCCCee--eEee---cCCceeEEEcC-------------CC--
Q 040274 103 IKMLYHQGPVSALAFHPN--GHLMATTGKECKIKIWDLRKYEV--LQTL---TGHAKTLDFSQ-------------KG-- 160 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~--g~~l~s~~~d~~i~vwd~~~~~~--~~~~---~~~v~~~~~s~-------------~g-- 160 (359)
..+..|...|++++|+|+ +.+|++++.|+.|++||++++.. ...+ ...+.+++|+| ++
T Consensus 95 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 95 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCE
T ss_pred eeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCE
Confidence 778889999999999999 99999999999999999998743 2222 45689999999 56
Q ss_pred cEEEEcCCcEEEEcCCCCCccc---cccccccCCCCcceeEEEEccC---CCEEEEEeCCCeEEEEEcCCC
Q 040274 161 LLAVGTGSFAQILGDFSGSHNY---SRYMGNSMVKGYQIGKVSFRPY---EDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 161 l~~~~~d~~i~v~d~~~~~~~~---~~~~~~~~~~~~~v~~~~~sp~---~~~l~~g~~dg~~~i~~~gs~ 225 (359)
+++++.|+.|++||+....... ..+..| ...|.+++|+|+ +.+|++++.||.+.+|....+
T Consensus 175 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h----~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 175 FVTGGADNLVKIWKYNSDAQTYVLESTLEGH----SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEETTSCEEEEEEETTTTEEEEEEEECCC----SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEeCCCeEEEEEecCCCcceeeEEEEecc----cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 8888899999999976543222 233344 348999999999 899999999999999876554
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=8.6e-24 Score=205.90 Aligned_cols=163 Identities=18% Similarity=0.321 Sum_probs=143.6
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~ 109 (359)
.+++|+|+|++|++++. .|.+++|+|++.+|++|+.|+.|++||. +++.+..+.+|.
T Consensus 348 ~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~ 426 (577)
T 2ymu_A 348 WGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS 426 (577)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC
Confidence 78999999999999876 7899999999999999999999999996 467788899999
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccc
Q 040274 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSR 184 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~ 184 (359)
..|++++|+|++.+|++++.|+.|++||+. ++.+..+ ...|++++|+|+| +++++.|+.|++||. ++ .....
T Consensus 427 ~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~-~~~~~ 503 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG-QLLQT 503 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS-CEEEE
T ss_pred CCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC-CEEEE
Confidence 999999999999999999999999999964 5666666 4568999999999 777888999999994 33 45566
Q ss_pred cccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 185 YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 185 ~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+..|.. .|++++|+|+|++|++|+.||.+++|..
T Consensus 504 ~~~h~~----~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 504 LTGHSS----SVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EECCSS----CEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EeCCCC----CEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 666654 8999999999999999999999999863
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=6.2e-25 Score=202.65 Aligned_cols=171 Identities=14% Similarity=0.146 Sum_probs=137.0
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---ceE
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA---LLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~---~~~ 103 (359)
++++|+|||++|++|+. .|++++|+|++.+|++|+.||+|++||+.++. +..
T Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 15 YEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred EEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence 88999999999999865 79999999999999999999999999999877 677
Q ss_pred EeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCe---eeEee----cCCceeEEEcCCC--cEEEEcCCcEEEEc
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE---VLQTL----TGHAKTLDFSQKG--LLAVGTGSFAQILG 174 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~---~~~~~----~~~v~~~~~s~~g--l~~~~~d~~i~v~d 174 (359)
.+.+|...|++++|+|++.+|++++.|+.|++||++++. .+..+ .+.|++++|+|++ +++++.|+.|++||
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 788999999999999999999999999999999999876 34555 3458999999999 78888999999999
Q ss_pred CCCCC-----------------ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCCC
Q 040274 175 DFSGS-----------------HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEP 227 (359)
Q Consensus 175 ~~~~~-----------------~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~ 227 (359)
+.... .....+ . +...|++++|+|++.+|++|+.||.+.+|....+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEY-P----SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECC-C----CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEecccCCCccccccccccchhhhhhcc-c----CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 74221 122222 3 445899999999999999999999999988776654
No 41
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=2.1e-24 Score=195.12 Aligned_cols=169 Identities=10% Similarity=0.109 Sum_probs=139.7
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCc--ce
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNP--FNGVVSLGHSGGTVTMWKPTTSA--LL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp--~~~~l~tg~~dg~v~lwd~~~~~--~~ 102 (359)
++++|+|+|++|++|+. .|.+++|+| ++.+|++|+.|++|++||+.++. .+
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKS 96 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEE
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEE
Confidence 89999999999999986 789999986 48899999999999999999874 56
Q ss_pred EEeecCCCCeEEEEEecC--CCEEEEecCCCeEEEEEcCCCee---eEee---cCCceeEEEcCC---------------
Q 040274 103 IKMLYHQGPVSALAFHPN--GHLMATTGKECKIKIWDLRKYEV---LQTL---TGHAKTLDFSQK--------------- 159 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~--g~~l~s~~~d~~i~vwd~~~~~~---~~~~---~~~v~~~~~s~~--------------- 159 (359)
..+.+|...|++++|+|+ +.+|++++.|++|++||++.+.. ...+ ...+.+++|+|+
T Consensus 97 ~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 97 HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCC
T ss_pred EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCc
Confidence 677899999999999997 78999999999999999987532 2233 345789999997
Q ss_pred --C--cEEEEcCCcEEEEcCCCCC--ccccccccccCCCCcceeEEEEccCC----CEEEEEeCCCeEEEEEcCC
Q 040274 160 --G--LLAVGTGSFAQILGDFSGS--HNYSRYMGNSMVKGYQIGKVSFRPYE----DVLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 160 --g--l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~~g~~dg~~~i~~~gs 224 (359)
+ +++++.|+.|++||+.... .....+..|. ..|.+++|+|++ .+|++|+.||.+.||....
T Consensus 177 ~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~----~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS----DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS----SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccceEEEecCCCeEEEEEeCCCCccceeeecccCC----CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 3 6778889999999975332 2334455554 389999999987 8999999999999997644
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=1e-23 Score=190.73 Aligned_cols=171 Identities=13% Similarity=0.146 Sum_probs=141.8
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCC---
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNP--FNGVVSLGHSGGTVTMWKPTTS--- 99 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp--~~~~l~tg~~dg~v~lwd~~~~--- 99 (359)
.+++|+|+|++|++|+. .|++++|+| ++.+|++|+.||.|++||+.++
T Consensus 15 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~ 94 (351)
T 3f3f_A 15 HDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEE 94 (351)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCT
T ss_pred eEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccc
Confidence 89999999999999886 799999999 5999999999999999999887
Q ss_pred ------cceEEeecCCCCeEEEEEecC--CCEEEEecCCCeEEEEEcCCCee----------------------------
Q 040274 100 ------ALLIKMLYHQGPVSALAFHPN--GHLMATTGKECKIKIWDLRKYEV---------------------------- 143 (359)
Q Consensus 100 ------~~~~~~~~h~~~v~~l~~~p~--g~~l~s~~~d~~i~vwd~~~~~~---------------------------- 143 (359)
.++..+..|.+.|++++|+|+ +.+|++++.|+.|++||+++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (351)
T 3f3f_A 95 CSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLS 174 (351)
T ss_dssp TSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEE
T ss_pred ccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEE
Confidence 457778899999999999999 99999999999999999875432
Q ss_pred --------------------------------eEee---cCCceeEEEcCCC------cEEEEcCCcEEEEcCCCCC---
Q 040274 144 --------------------------------LQTL---TGHAKTLDFSQKG------LLAVGTGSFAQILGDFSGS--- 179 (359)
Q Consensus 144 --------------------------------~~~~---~~~v~~~~~s~~g------l~~~~~d~~i~v~d~~~~~--- 179 (359)
+..+ .+.|++++|+|++ +++++.|+.|++||+....
T Consensus 175 ~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 175 WCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPL 254 (351)
T ss_dssp ECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---
T ss_pred eccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcc
Confidence 2222 2357899999995 7888899999999975431
Q ss_pred ------------------------------------------ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeE
Q 040274 180 ------------------------------------------HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWS 217 (359)
Q Consensus 180 ------------------------------------------~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~ 217 (359)
.....+..| ...|++++|+|++.+|++|+.||.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 255 ASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH----NGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ------------------------------------CCSEEEEEEEEECTT----SSCEEEEEECSSSCCEEEEETTSCE
T ss_pred ccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc----cccEEEEEEcCCCCEEEEecCCCcE
Confidence 112223333 3489999999999999999999988
Q ss_pred EEEEcCCCC
Q 040274 218 GILVPRSSE 226 (359)
Q Consensus 218 ~i~~~gs~~ 226 (359)
.+|....+.
T Consensus 331 ~iw~~~~~~ 339 (351)
T 3f3f_A 331 RLWKATYSN 339 (351)
T ss_dssp EEEEECTTS
T ss_pred EEEecCcCc
Confidence 888776543
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=3.9e-23 Score=186.74 Aligned_cols=164 Identities=16% Similarity=0.270 Sum_probs=142.6
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--ce
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA--LL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~--~~ 102 (359)
.+++|+|+|++|++++. .|.+++|+|++.+|++|+.||.|++||+.++. ..
T Consensus 55 ~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 134 (337)
T 1gxr_A 55 CAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK 134 (337)
T ss_dssp CEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEE
T ss_pred EEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCccee
Confidence 89999999999999877 58999999999999999999999999999887 56
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCC
Q 040274 103 IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFS 177 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~ 177 (359)
..+..|...|++++|+|++.+|++++.|+.|++||+++++.+..+. +.+.+++|+|++ +++++.|+.|.+||+..
T Consensus 135 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred eecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 6777899999999999999999999999999999999998888773 568999999999 77888899999999765
Q ss_pred CCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 178 GSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
. .....+ .+ ...+.+++|+|++.+|++++.+|.+.+|.
T Consensus 215 ~-~~~~~~-~~----~~~v~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 215 G-RQLQQH-DF----TSQIFSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp T-EEEEEE-EC----SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred C-ceEeee-cC----CCceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 4 333332 22 23799999999999999999999887743
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=5.8e-24 Score=200.71 Aligned_cols=173 Identities=10% Similarity=0.019 Sum_probs=139.4
Q ss_pred eEEEECC-CCCEEEEecc-------------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcceEE
Q 040274 52 ILWILPS-SGRYMAVAGR-------------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALLIK 104 (359)
Q Consensus 52 ~~l~~sp-dg~~l~~~~~-------------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~~~ 104 (359)
++|+|+| ++++||+|+. .|++|+|+| ++.+|++|+.||+|++||+.++.....
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF 202 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE
Confidence 7999999 6778999876 799999999 688999999999999999987644333
Q ss_pred eec--CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC---cEEEEcCCcEEEEcCC
Q 040274 105 MLY--HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG---LLAVGTGSFAQILGDF 176 (359)
Q Consensus 105 ~~~--h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~ 176 (359)
... +...+.+++|+|++.+|++|+.||.|++||++. +.+..+ ...|++++|+|++ +++++.|+.|+|||+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 332 344678999999999999999999999999874 455555 4568999999987 5577889999999976
Q ss_pred CCCccccc--cccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCCCce
Q 040274 177 SGSHNYSR--YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNF 229 (359)
Q Consensus 177 ~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~~~ 229 (359)
........ ...| ...|++++|+|+|.+|++|+.||.+.||....++...
T Consensus 282 ~~~~~~~~~~~~~h----~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 282 QVRGKASFLYSLPH----RHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp TCCSSSCCSBCCBC----SSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred cccccceEEEeeec----cccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 65322222 2233 4489999999999999999999999999887665443
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.92 E-value=3.4e-23 Score=185.40 Aligned_cols=170 Identities=14% Similarity=0.133 Sum_probs=137.7
Q ss_pred eEEEECC--CCCEEEEecc-------------------------ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--
Q 040274 52 ILWILPS--SGRYMAVAGR-------------------------RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTSA-- 100 (359)
Q Consensus 52 ~~l~~sp--dg~~l~~~~~-------------------------~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~~-- 100 (359)
++++|+| +|++|++|+. .|.+++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 57 ~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 57 WRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT 136 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB
T ss_pred EEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce
Confidence 8999986 4899999876 6889999997 8899999999999999998763
Q ss_pred ceEEeecCCCCeEEEEEecC-------------CCEEEEecCCCeEEEEEcCCCe----eeEeec---CCceeEEEcCC-
Q 040274 101 LLIKMLYHQGPVSALAFHPN-------------GHLMATTGKECKIKIWDLRKYE----VLQTLT---GHAKTLDFSQK- 159 (359)
Q Consensus 101 ~~~~~~~h~~~v~~l~~~p~-------------g~~l~s~~~d~~i~vwd~~~~~----~~~~~~---~~v~~~~~s~~- 159 (359)
....+.+|...|++++|+|+ +.+|++|+.|++|++||++++. .+.++. +.|.+++|+|+
T Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 24567799999999999997 5799999999999999998765 445554 45899999998
Q ss_pred --C--cEEEEcCCcEEEEcCCCCCccc--cccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 160 --G--LLAVGTGSFAQILGDFSGSHNY--SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 160 --g--l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+ +++++.|++|+|||+....... ..+..+ . +...|.+++|+|+|.+|++|+.||.+++|...
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEE-K-FPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS-C-CSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCceEEEEEECCCcEEEEEeCCCCCccceeeeecc-c-CCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 3 7888899999999975532111 122111 1 33479999999999999999999988888754
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=2.1e-23 Score=208.29 Aligned_cols=169 Identities=12% Similarity=0.153 Sum_probs=145.8
Q ss_pred eEEEECCCC-CEEEEecc----------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce
Q 040274 52 ILWILPSSG-RYMAVAGR----------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL 102 (359)
Q Consensus 52 ~~l~~spdg-~~l~~~~~----------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~ 102 (359)
++++|+|++ .+|++|+. .|.+++|+|++.+|++|+.||+|+|||+.++..+
T Consensus 386 ~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 386 TAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp EEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 899999864 78888876 5899999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee------cCCceeEEEcCCC----cEEEEcCCcEEE
Q 040274 103 IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL------TGHAKTLDFSQKG----LLAVGTGSFAQI 172 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~------~~~v~~~~~s~~g----l~~~~~d~~i~v 172 (359)
..+.+|...|++++|+|++.+|++++.|++|++||+......... ...|.+++|+|++ +++++.|++|++
T Consensus 466 ~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 466 RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 999999999999999999999999999999999998754332222 2348999999986 788899999999
Q ss_pred EcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 173 LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 173 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
||+... .....+..|.. .|++++|+|++.+|++|+.||.+++|...++
T Consensus 546 wd~~~~-~~~~~~~~h~~----~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 546 WNLSNC-KLRSTLAGHTG----YVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp EETTTC-CEEEEECCCSS----CEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred EECCCC-cEEEEEcCCCC----CEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 997554 45555666644 8999999999999999999999999876554
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=8.7e-24 Score=197.65 Aligned_cols=167 Identities=14% Similarity=0.194 Sum_probs=140.0
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~ 109 (359)
.+++|+|+|++|++++. .+....|+|++.+|++|+.||.|++||+.++.....+.+|.
T Consensus 60 ~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp TTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS
T ss_pred cceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc
Confidence 57899999999999885 34445789999999999999999999999998888888999
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccc
Q 040274 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSR 184 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~ 184 (359)
+.|++++|+|++.+|++++.|+.|++||+.+++.+..+. +.|++++|+|++ +++++.|+.|++||+... .....
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~ 218 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG-TTIHT 218 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEEE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC-ceeEE
Confidence 999999999999999999999999999999998887774 568999999999 888889999999997654 44444
Q ss_pred cccccCCCC---------------------cceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 185 YMGNSMVKG---------------------YQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 185 ~~~~~~~~~---------------------~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
+..+.. +. ..+.+++|+|++.+|++|+.||.+.+|
T Consensus 219 ~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 219 FNRKEN-PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp ECBTTB-TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred eecCCC-CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 443322 22 245556668999999999999988774
No 48
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=2e-23 Score=208.37 Aligned_cols=171 Identities=21% Similarity=0.208 Sum_probs=144.0
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCC--CEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFN--GVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~--~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
.+++|+|+|++|++|+. .|.|++|+|++ ..|++|+.||+|++||+.++....
T Consensus 476 ~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~ 555 (694)
T 3dm0_A 476 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 555 (694)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE
Confidence 89999999999999886 48999999976 689999999999999999999999
Q ss_pred EeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCc
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSH 180 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~ 180 (359)
.+.+|.+.|++++|+|+|.+|++|+.|+.|++||+++++.+..+ ...+.+++|+|++ +++++.++.|+|||+... .
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~-~ 634 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESK-S 634 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTT-E
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCC-C
Confidence 99999999999999999999999999999999999999988877 4568999999999 888888899999997654 3
Q ss_pred cccccccccC---------------CCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 181 NYSRYMGNSM---------------VKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 181 ~~~~~~~~~~---------------~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
....+..+.. .+...+++++|+|+|.+|++|+.||.++||..+
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 635 IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 2222211100 011137899999999999999999988887643
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.9e-24 Score=206.08 Aligned_cols=166 Identities=9% Similarity=0.035 Sum_probs=138.5
Q ss_pred eEEEECCC------CCEEEEecc----------------------------------ceeEEEEcCCCCEEEEEeCCCeE
Q 040274 52 ILWILPSS------GRYMAVAGR----------------------------------RTDLMRVNPFNGVVSLGHSGGTV 91 (359)
Q Consensus 52 ~~l~~spd------g~~l~~~~~----------------------------------~v~~l~~sp~~~~l~tg~~dg~v 91 (359)
++++|+|+ +.+||+++. .|++++|+|++ .|++|+.||+|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE
Confidence 78999986 578988775 36789999864 89999999999
Q ss_pred EEEeCCCC-cceEEeecCCCCeEEE--EEecCC-CEEEEecCCCeEEEEEcCCCeeeEeec-----CCceeEEEcCCC--
Q 040274 92 TMWKPTTS-ALLIKMLYHQGPVSAL--AFHPNG-HLMATTGKECKIKIWDLRKYEVLQTLT-----GHAKTLDFSQKG-- 160 (359)
Q Consensus 92 ~lwd~~~~-~~~~~~~~h~~~v~~l--~~~p~g-~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~v~~~~~s~~g-- 160 (359)
++||+.++ .+...+.+|.+.|+++ .|+|+| .+|+||+.|++|+|||+++++++.++. +.+.+++|+|++
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS 369 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe
Confidence 99999976 4556688999999999 568888 899999999999999999887655542 247899999998
Q ss_pred cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 161 LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 161 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+++++.|++|++||+... .....+.+|.. .|++++|+|+|.+|++|+.||.+++|...
T Consensus 370 l~s~~~d~tv~lwd~~~~-~~~~~l~gH~~----~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAA-FAVHPLVSRET----TITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEEECSSSEEEEEETTCT-TCCEEEEECSS----CEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred EEEeCCCCcEEEEECccc-ccceeeecCCC----ceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 777788899999997654 44445566654 89999999999999999999999988653
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=7.1e-23 Score=189.45 Aligned_cols=164 Identities=8% Similarity=0.035 Sum_probs=138.3
Q ss_pred eEEEECCCC-CEEEEecc-------------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcceEE
Q 040274 52 ILWILPSSG-RYMAVAGR-------------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALLIK 104 (359)
Q Consensus 52 ~~l~~spdg-~~l~~~~~-------------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~~~ 104 (359)
++++|+|+| ++|++|+. .|.+++|+| ++.+|++|+.||.|++||+.+ ..+..
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~ 155 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQV 155 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEE
T ss_pred EEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEE
Confidence 999999999 99999876 789999999 779999999999999999985 55555
Q ss_pred eecC---CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC---cEEEEcCCcEEEEcC
Q 040274 105 MLYH---QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG---LLAVGTGSFAQILGD 175 (359)
Q Consensus 105 ~~~h---~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g---l~~~~~d~~i~v~d~ 175 (359)
+..| ...|.+++|+|++.+|++++.|+.|++||++ +.++..+ .+.|.+++|+|++ +++++.|+.|++||+
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEG
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeC
Confidence 5544 4889999999999999999999999999994 6666666 4568999999998 677888999999997
Q ss_pred CCCC---ccccccccccCCCCcceeEEEEcc-CCCEEEEEeCCCeEEEEEc
Q 040274 176 FSGS---HNYSRYMGNSMVKGYQIGKVSFRP-YEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 176 ~~~~---~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~g~~dg~~~i~~~ 222 (359)
.... .....+ .|. ..|.+++|+| ++.+|++++.||.+.+|..
T Consensus 235 ~~~~~~~~~~~~~-~~~----~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 235 RNIKDKNSYIAEM-PHE----KPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp GGCCSTTCEEEEE-ECS----SCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred CCCCcccceEEEe-cCC----CceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 6532 122222 343 4899999999 9999999999999999864
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.3e-23 Score=193.16 Aligned_cols=166 Identities=14% Similarity=0.175 Sum_probs=142.0
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCc---
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPF-NGVVSLGHSGGTVTMWKPTTSA--- 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~-~~~l~tg~~dg~v~lwd~~~~~--- 100 (359)
.+++|+|+|.+|++++. .|++++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 71 ~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 150 (416)
T 2pm9_A 71 NDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESP 150 (416)
T ss_dssp EEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCT
T ss_pred EEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 89999999999999865 7999999998 8999999999999999999876
Q ss_pred ---ceEE---eecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEeec---------CCceeEEEcCCC---c
Q 040274 101 ---LLIK---MLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQTLT---------GHAKTLDFSQKG---L 161 (359)
Q Consensus 101 ---~~~~---~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~~~---------~~v~~~~~s~~g---l 161 (359)
.... +..|...|++++|+|+ +.+|++++.|+.|++||+++++.+..+. ..+.+++|+|++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 151 SNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230 (416)
T ss_dssp TTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred ccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEE
Confidence 3333 3579999999999998 7899999999999999999998887773 348999999997 6
Q ss_pred EEEEcCC---cEEEEcCCCCCccccccc-cccCCCCcceeEEEEcc-CCCEEEEEeCCCeEEEEE
Q 040274 162 LAVGTGS---FAQILGDFSGSHNYSRYM-GNSMVKGYQIGKVSFRP-YEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 162 ~~~~~d~---~i~v~d~~~~~~~~~~~~-~~~~~~~~~v~~~~~sp-~~~~l~~g~~dg~~~i~~ 221 (359)
++++.++ .|++||+.........+. .|.. .|.+++|+| ++.+|++|+.||.+.+|.
T Consensus 231 ~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQK----GILSLDWCHQDEHLLLSSGRDNTVLLWN 291 (416)
T ss_dssp EEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS----CEEEEEECSSCSSCEEEEESSSEEEEEC
T ss_pred EEEECCCCCceEEEEeCCCCCCCcEEeecCccC----ceeEEEeCCCCCCeEEEEeCCCCEEEee
Confidence 6677777 999999876545555555 5543 899999999 999999999999988743
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=1.3e-22 Score=189.20 Aligned_cols=173 Identities=14% Similarity=0.197 Sum_probs=146.4
Q ss_pred eEEEECC-CCCEEEEecc------------------------------ceeEEEEcCCC-CEEEEEeCCCeEEEEeCCCC
Q 040274 52 ILWILPS-SGRYMAVAGR------------------------------RTDLMRVNPFN-GVVSLGHSGGTVTMWKPTTS 99 (359)
Q Consensus 52 ~~l~~sp-dg~~l~~~~~------------------------------~v~~l~~sp~~-~~l~tg~~dg~v~lwd~~~~ 99 (359)
.+++|+| ++++|++|+. .|++++|+|++ .+|++|+.||.|++||+.++
T Consensus 85 ~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 164 (402)
T 2aq5_A 85 LDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG 164 (402)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC
Confidence 8999999 9999999876 68999999997 69999999999999999999
Q ss_pred cceEEe--ecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee-cC----CceeEEEcCCC-cEEEE----cC
Q 040274 100 ALLIKM--LYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-TG----HAKTLDFSQKG-LLAVG----TG 167 (359)
Q Consensus 100 ~~~~~~--~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~-~~----~v~~~~~s~~g-l~~~~----~d 167 (359)
+.+..+ .+|.+.|++++|+|++.+|++++.|+.|++||+++++.+..+ .. .+.++.|+|+| +++++ .+
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d 244 (402)
T 2aq5_A 165 AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSE 244 (402)
T ss_dssp EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCC
T ss_pred CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCC
Confidence 999998 789999999999999999999999999999999999988877 32 27899999999 55554 78
Q ss_pred CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEE-EeCCCeEEEEEcCCCCC
Q 040274 168 SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGI-GHSMGWSGILVPRSSEP 227 (359)
Q Consensus 168 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-g~~dg~~~i~~~gs~~~ 227 (359)
+.|.+||+............. +...|.+++|+|++.+|++ |+.||.+.+|....+.+
T Consensus 245 ~~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 245 RQVALWDTKHLEEPLSLQELD---TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEEEETTBCSSCSEEEECC---CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred ceEEEEcCccccCCceEEecc---CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 999999976654333222211 2336999999999999964 55799999998876664
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.2e-23 Score=193.90 Aligned_cols=166 Identities=12% Similarity=0.120 Sum_probs=136.4
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---ce
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA---LL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~---~~ 102 (359)
++++|+|+|++|++++. .|.+++|+|++.+|++|+.|+.|++||+.++. ..
T Consensus 59 ~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 138 (377)
T 3dwl_C 59 TCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS 138 (377)
T ss_dssp EEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee
Confidence 89999999999999886 78999999999999999999999999999876 46
Q ss_pred EEeec-CCCCeEEEEEecCCCEEEEecCCCeEEEEEcC------------------CCeeeEee--cCCceeEEEcCCC-
Q 040274 103 IKMLY-HQGPVSALAFHPNGHLMATTGKECKIKIWDLR------------------KYEVLQTL--TGHAKTLDFSQKG- 160 (359)
Q Consensus 103 ~~~~~-h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~------------------~~~~~~~~--~~~v~~~~~s~~g- 160 (359)
..+.. |...|++++|+|++.+|++++.|+.|++||+. .+.++..+ .+.|++++|+|+|
T Consensus 139 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 139 KHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGN 218 (377)
T ss_dssp EEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSS
T ss_pred eEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCC
Confidence 77777 99999999999999999999999999999985 34455554 3458999999999
Q ss_pred -cEEEEcCCcEEEEcCCCCCcc---ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 161 -LLAVGTGSFAQILGDFSGSHN---YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+++++.|+.|++||+...... ...+..|.. .|.+++|+|++.+|++|+.++.+.++.
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~~~~~~~~~ 279 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQL----PLRSLLWANESAIVAAGYNYSPILLQG 279 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSSS----CEEEEEEEETTEEEEEESSSSEEEECC
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCC----ceEEEEEcCCCCEEEEEcCCcEEEEEe
Confidence 778889999999997665332 444555543 799999999999999998888764433
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=7.4e-23 Score=207.24 Aligned_cols=165 Identities=8% Similarity=0.072 Sum_probs=141.3
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|||+|.+|++++. .|++++|+|++.+|++|+.||.|++||+.++..+..+.+|
T Consensus 17 ~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence 89999999999999876 7999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCC-eeeEee---cCCceeEEEcC-CC--cEEEEcCCcEEEEcCCCCCcc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKY-EVLQTL---TGHAKTLDFSQ-KG--LLAVGTGSFAQILGDFSGSHN 181 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~-~~~~~~---~~~v~~~~~s~-~g--l~~~~~d~~i~v~d~~~~~~~ 181 (359)
.+.|++++|+|++.+|++++.||.|++||+.++ .....+ ...+.+++|+| ++ +++++.|+.|.+||+... ..
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~-~~ 175 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-TP 175 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS-SC
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cc
Confidence 999999999999999999999999999999986 555555 45689999999 66 888889999999997554 33
Q ss_pred ccccccccCCCCcceeEEEEcc--CCCEEEEEeCCCeEEEE
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRP--YEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~g~~dg~~~i~ 220 (359)
...+..+ +...+.+++|+| ++.+|++|+.+|.+.+|
T Consensus 176 ~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 176 NFTLTTG---QERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp SEEEECC---CTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred eeEEecC---CCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 3333333 223688888888 88888888888877663
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=1.6e-22 Score=185.62 Aligned_cols=170 Identities=9% Similarity=0.031 Sum_probs=142.2
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEE--
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIK-- 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~-- 104 (359)
++++|+|+|++|++++. .|++++|+|++.+|++|+.||.|++||+.+++....
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEE
Confidence 89999999999999965 789999999999999999999999999988865444
Q ss_pred eecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee---eEee----cCCceeEEEcCCC--cEEEEcCCcEEEEcC
Q 040274 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV---LQTL----TGHAKTLDFSQKG--LLAVGTGSFAQILGD 175 (359)
Q Consensus 105 ~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~---~~~~----~~~v~~~~~s~~g--l~~~~~d~~i~v~d~ 175 (359)
+..|...|++++|+|++.+|++++.|+.|++||+..+.. ...+ ...+.+++|+|++ +++++.|+.|++||+
T Consensus 92 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 92 ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 457999999999999999999999999999999988652 2333 3568999999999 778888999999996
Q ss_pred CC-----------------CCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 176 FS-----------------GSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 176 ~~-----------------~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
.. .......+..| ...|.+++|+|++.+|++++.||.+.+|....+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSS----CGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCC----SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred ccccccccccccccccccchhhheEecCCC----CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 32 12333344444 348999999999999999999999998766544
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=2.7e-22 Score=187.09 Aligned_cols=163 Identities=19% Similarity=0.241 Sum_probs=137.4
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCC-CCcceEEeec
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPT-TSALLIKMLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~-~~~~~~~~~~ 107 (359)
.+++|+|+|++|++|+. .|.+++|+ +.+|++|+.||.|.+||+. ....+..+.+
T Consensus 138 ~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 215 (401)
T 4aez_A 138 ASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQG 215 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred EEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcC
Confidence 89999999999999875 78999994 5699999999999999999 4566788889
Q ss_pred CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC--cEEEE---cCCcEEEEcCCCCC
Q 040274 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG--LLAVG---TGSFAQILGDFSGS 179 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g--l~~~~---~d~~i~v~d~~~~~ 179 (359)
|.+.|.+++|+|++.+|++++.|+.|++||++++.++..+ ...|.+++|+|++ +++++ .|+.|++||+...
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~- 294 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG- 294 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-
Confidence 9999999999999999999999999999999998888777 4568999999987 55543 5899999997654
Q ss_pred ccccccccccCCCCcceeEEEEccCCCEEEE--EeCCCeEEEEEc
Q 040274 180 HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGI--GHSMGWSGILVP 222 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~--g~~dg~~~i~~~ 222 (359)
.....+. + ...|.+++|+|++.+|++ |+.+|.+.+|..
T Consensus 295 ~~~~~~~-~----~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 295 ARVNTVD-A----GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp CEEEEEE-C----SSCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred CEEEEEe-C----CCcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 4444443 2 237999999999999999 448998887543
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-22 Score=185.70 Aligned_cols=169 Identities=13% Similarity=0.158 Sum_probs=146.2
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.+++|+|+|++|++++. .|.+++|+|++.+|++++.||.|++||+.+++.+..+. |
T Consensus 36 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~ 114 (369)
T 3zwl_B 36 TQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-S 114 (369)
T ss_dssp EEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-C
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-c
Confidence 89999999999999876 79999999999999999999999999999999888886 8
Q ss_pred CCCeEEEEEecCCCEEEEecCC-----CeEEEEEcCCCee-----------eEee---cC--CceeEEEcCCC--cEEEE
Q 040274 109 QGPVSALAFHPNGHLMATTGKE-----CKIKIWDLRKYEV-----------LQTL---TG--HAKTLDFSQKG--LLAVG 165 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d-----~~i~vwd~~~~~~-----------~~~~---~~--~v~~~~~s~~g--l~~~~ 165 (359)
...|.+++|+|++.+|++++.+ +.|.+||+..... +..+ .+ .+.+++|+|++ +++++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 8999999999999999999998 9999999976532 1222 12 68999999999 77888
Q ss_pred cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 166 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
.++.|.+||+.........+..|.. .|.+++|+|++.+|++++.||.+.+|....+
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSIDLHEK----SISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEECCCCcEeEEEEecCCC----ceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 8999999997764455666666644 8999999999999999999999999876543
No 58
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.3e-23 Score=194.22 Aligned_cols=145 Identities=10% Similarity=0.194 Sum_probs=117.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCC-----CeEEEEEecCCCEEEEecCCCeEEEEEcCCCe-
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG-----PVSALAFHPNGHLMATTGKECKIKIWDLRKYE- 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~-----~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~- 142 (359)
.|.+++|||+|.+|++++.||.|++||..+ ++..+. |.. .|.+++|||||++|++|+.||+|++||+.++.
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 699999999999999999999999999554 566666 666 49999999999999999999999999999874
Q ss_pred ------eeEee----c---CCceeEEEcCCCcEEEEcCCcEEEEcCCCCCcc--cccc-ccccCCCCcceeEEEEccCCC
Q 040274 143 ------VLQTL----T---GHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHN--YSRY-MGNSMVKGYQIGKVSFRPYED 206 (359)
Q Consensus 143 ------~~~~~----~---~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~--~~~~-~~~~~~~~~~v~~~~~sp~~~ 206 (359)
.+.++ . +.|.+++|+|+|+++++.|++|++||+...... ...+ ..|. ..|.+++|+ |.
T Consensus 164 ~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~----~~V~svaFs--g~ 237 (588)
T 2j04_A 164 NTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASR----RKITDLKIV--DY 237 (588)
T ss_dssp TCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCS----SCCCCEEEE--TT
T ss_pred ccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeeccccc----CcEEEEEEE--CC
Confidence 24555 2 368999999999888889999999997554311 1223 2343 379999999 68
Q ss_pred EEEEEeCCCeEEEEEcC
Q 040274 207 VLGIGHSMGWSGILVPR 223 (359)
Q Consensus 207 ~l~~g~~dg~~~i~~~g 223 (359)
+|++++ ++.+.+|...
T Consensus 238 ~LASa~-~~tIkLWd~~ 253 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLK 253 (588)
T ss_dssp EEEEEC-SSEEEEEETT
T ss_pred EEEEEe-CCeEEEEECC
Confidence 999987 5888876543
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.90 E-value=2e-22 Score=184.85 Aligned_cols=168 Identities=15% Similarity=0.114 Sum_probs=141.7
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeC--------
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKP-------- 96 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~-------- 96 (359)
.+++|+|+|++|++++. .|.+++|+|++.+|++|+.||.|++||+
T Consensus 100 ~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 179 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 179 (372)
T ss_dssp EEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCC
T ss_pred eEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccc
Confidence 89999999999999875 6899999999999999999999999995
Q ss_pred ----------CCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC-cE
Q 040274 97 ----------TTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG-LL 162 (359)
Q Consensus 97 ----------~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g-l~ 162 (359)
.++.++..+.+|...|++++|+|++.+|++++.|+.|++||+++++++..+. ..+.+++|+|+| ++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 180 PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLV 259 (372)
T ss_dssp CCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEE
T ss_pred ccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEE
Confidence 4677888888999999999999999999999999999999999999888883 468999999999 77
Q ss_pred EEEcCCcEEEEcCCC--CCc-c-----------------c-------------------ccc-ccccCCCCcceeEEEEc
Q 040274 163 AVGTGSFAQILGDFS--GSH-N-----------------Y-------------------SRY-MGNSMVKGYQIGKVSFR 202 (359)
Q Consensus 163 ~~~~d~~i~v~d~~~--~~~-~-----------------~-------------------~~~-~~~~~~~~~~v~~~~~s 202 (359)
+++.|+.|++|++.. +.. . . ..+ .+ |...|++++|+
T Consensus 260 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~ 335 (372)
T 1k8k_C 260 AAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL----HKNSVSQISVL 335 (372)
T ss_dssp EEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSS----SSSCEEEEEEE
T ss_pred EEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccccc----ccCCcceeEEe
Confidence 778999999999755 200 0 0 111 13 44589999977
Q ss_pred -cCC---CEEEEEeCCCeEEEEEcC
Q 040274 203 -PYE---DVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 203 -p~~---~~l~~g~~dg~~~i~~~g 223 (359)
++| .+|++|+.||.+.+|...
T Consensus 336 ~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 336 SGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp ESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cCCCcceeeEEEecCCCceEEEEec
Confidence 566 899999999977777653
No 60
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=8.5e-23 Score=192.70 Aligned_cols=146 Identities=17% Similarity=0.211 Sum_probs=119.5
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcce--EEeecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCeee
Q 040274 69 RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALL--IKMLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYEVL 144 (359)
Q Consensus 69 ~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~--~~~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~~~ 144 (359)
.|+||+||| ++.+|++|+.||.|+|||+.++... ..+.+|.+.|++|+|+| ++.+|++|+.||+|++||+.+....
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 699999999 5679999999999999999877543 44568999999999998 7899999999999999999876443
Q ss_pred Eee-----cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCC-EEEEEeCCCe
Q 040274 145 QTL-----TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED-VLGIGHSMGW 216 (359)
Q Consensus 145 ~~~-----~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~~dg~ 216 (359)
... ...+.+++|+|++ +++++.||.|++||+.. .....+..|.. .|++++|+|++. +|++|+.|+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~----~v~~v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG--KELWNLRMHKK----KVTHVALNPCCDWFLATASVDQT 274 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS--CBCCCSBCCSS----CEEEEEECTTCSSEEEEEETTSB
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc--ceeEEEecccc----eEEeeeecCCCceEEEEecCcce
Confidence 222 2346899999999 77788899999999643 34445555544 899999999986 7889999998
Q ss_pred EEEE
Q 040274 217 SGIL 220 (359)
Q Consensus 217 ~~i~ 220 (359)
+.||
T Consensus 275 v~iw 278 (435)
T 4e54_B 275 VKIW 278 (435)
T ss_dssp CCEE
T ss_pred eeEE
Confidence 7774
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4.1e-22 Score=182.12 Aligned_cols=166 Identities=13% Similarity=0.176 Sum_probs=144.8
Q ss_pred eEEEECCCCCEEEEecc-----------------------------------------ceeEEEEcCCCCEEEEEeCCCe
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------------------------RTDLMRVNPFNGVVSLGHSGGT 90 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------------------------~v~~l~~sp~~~~l~tg~~dg~ 90 (359)
.+++|+|+|++|++++. .+.+++|+|++.+|++|+.||.
T Consensus 119 ~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 198 (369)
T 3zwl_B 119 KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGK 198 (369)
T ss_dssp EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSE
T ss_pred EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCE
Confidence 88999999999998642 5889999999999999999999
Q ss_pred EEEEeCCC-CcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--cEEEE
Q 040274 91 VTMWKPTT-SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAVG 165 (359)
Q Consensus 91 v~lwd~~~-~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~~ 165 (359)
|++||+.+ +..+..+..|...|.+++|+|++.+|++++.|+.|++||+.++..+..+ ...+.+++|+|++ +++++
T Consensus 199 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp EEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEee
Confidence 99999998 6888889899999999999999999999999999999999999888877 4568999999999 66666
Q ss_pred cCC--------------cEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 166 TGS--------------FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 166 ~d~--------------~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
.++ .+.+||.... .....+..|.. .|++++|+|++.+|++|+.||.+.+|..
T Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 279 GQEAKDVTTTSANEGKFEARFYHKIFE-EEIGRVQGHFG----PLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp CCC-------------CEEEEEETTTC-CEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred cCCCceEEEEecCCCcceeEEEecCCC-cchhheecccC----cEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 666 7999996554 55556666644 8999999999999999999997777654
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=2e-22 Score=184.18 Aligned_cols=169 Identities=13% Similarity=0.115 Sum_probs=137.7
Q ss_pred eEEEECCC----CCEEEEecc-----------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSS----GRYMAVAGR-----------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spd----g~~l~~~~~-----------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
++++|+|+ |.+|++|+. .|++++|+| ++.+|++|+.||.|++||+.+++.+.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVA 152 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEE
Confidence 88999998 678998876 799999999 89999999999999999999999888
Q ss_pred Ee---ecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeee------------------------------------
Q 040274 104 KM---LYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL------------------------------------ 144 (359)
Q Consensus 104 ~~---~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~------------------------------------ 144 (359)
.+ .+|...|.+++|+|++.+|++++.|+.|++||+++++.+
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred EecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 88 689999999999999999999999999999998754211
Q ss_pred ----------------------------------------------Eee---cCCceeEEEcCC--C--cEEEEcCCcEE
Q 040274 145 ----------------------------------------------QTL---TGHAKTLDFSQK--G--LLAVGTGSFAQ 171 (359)
Q Consensus 145 ----------------------------------------------~~~---~~~v~~~~~s~~--g--l~~~~~d~~i~ 171 (359)
..+ ...+++++|+|+ | +++++.||.|+
T Consensus 233 ~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 233 YVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp CCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEE
T ss_pred eEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEE
Confidence 111 123667888888 7 66777889999
Q ss_pred EEcCCCCCccc---cccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 172 ILGDFSGSHNY---SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 172 v~d~~~~~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+||+....... ..+..|. +...|++++|+|++.+|++|+.||.+.+|..
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHK--CGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTT--CCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEECCCCCCccccceEEcccc--cCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 99976543221 1334441 2458999999999999999999998888753
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=9.7e-23 Score=205.30 Aligned_cols=165 Identities=13% Similarity=0.179 Sum_probs=140.5
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--ce
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTSA--LL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~~--~~ 102 (359)
.+++|+|+|++|++|+. .|++++|+|+ +.+|++|+.||.|++||+.++. .+
T Consensus 13 ~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 13 HDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI 92 (753)
T ss_dssp EEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccc
Confidence 88999999999999875 7999999987 8999999999999999999886 67
Q ss_pred EEeecCCCCeEEEEEecC--CCEEEEecCCCeEEEEEcCCCee--eEee---cCCceeEEEcC-------------CC--
Q 040274 103 IKMLYHQGPVSALAFHPN--GHLMATTGKECKIKIWDLRKYEV--LQTL---TGHAKTLDFSQ-------------KG-- 160 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~--g~~l~s~~~d~~i~vwd~~~~~~--~~~~---~~~v~~~~~s~-------------~g-- 160 (359)
..+.+|...|++++|+|+ +.+|++|+.||.|++||++++.. ...+ ...|.+++|+| ++
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 778899999999999999 99999999999999999988733 2222 45689999999 36
Q ss_pred cEEEEcCCcEEEEcCCCCCcc---ccccccccCCCCcceeEEEEccC---CCEEEEEeCCCeEEEE
Q 040274 161 LLAVGTGSFAQILGDFSGSHN---YSRYMGNSMVKGYQIGKVSFRPY---EDVLGIGHSMGWSGIL 220 (359)
Q Consensus 161 l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~g~~dg~~~i~ 220 (359)
+++++.||.|++||+...... ...+..| ...|++++|+|+ +.+|++|+.||.+.+|
T Consensus 173 l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h----~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDAQTYVLESTLEGH----SDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp EEEEETTSCEEEEEEETTTTEEEEEEEECCC----SSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred EEEEECCCeEEEEeccCCcccceeeeeecCC----CCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 888889999999997655322 2233344 348999999999 9999999999998874
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4.8e-22 Score=182.50 Aligned_cols=171 Identities=14% Similarity=0.155 Sum_probs=140.8
Q ss_pred eEEEECCC--CCEEEEecc-------------------------ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--
Q 040274 52 ILWILPSS--GRYMAVAGR-------------------------RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTSA-- 100 (359)
Q Consensus 52 ~~l~~spd--g~~l~~~~~-------------------------~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~~-- 100 (359)
++++|+|+ +++|++++. .|.+++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 59 ~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 59 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 138 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC
T ss_pred EEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce
Confidence 88999987 999999886 7999999998 9999999999999999998873
Q ss_pred ceEEeecCCCCeEEEEEec-------------CCCEEEEecCCCeEEEEEcCCCe----eeEee---cCCceeEEEcCC-
Q 040274 101 LLIKMLYHQGPVSALAFHP-------------NGHLMATTGKECKIKIWDLRKYE----VLQTL---TGHAKTLDFSQK- 159 (359)
Q Consensus 101 ~~~~~~~h~~~v~~l~~~p-------------~g~~l~s~~~d~~i~vwd~~~~~----~~~~~---~~~v~~~~~s~~- 159 (359)
....+..|...|++++|+| ++.+|++++.|+.|++||++++. .+..+ .+.|.+++|+|+
T Consensus 139 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 139 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 218 (379)
T ss_dssp CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC
Confidence 3456678999999999999 69999999999999999998764 33444 356899999999
Q ss_pred --C--cEEEEcCCcEEEEcCCCCCcccc-ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 160 --G--LLAVGTGSFAQILGDFSGSHNYS-RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 160 --g--l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+ +++++.|+.|++||+........ ....... +...|++++|+|++.+|++++.||.+.+|...
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC-CSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCCCeEEEEeCCCEEEEEeCCCCCccceeeeecccc-CCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 7 88888999999999766432211 1111111 34479999999999999999999999888754
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=1.5e-22 Score=184.91 Aligned_cols=158 Identities=15% Similarity=0.196 Sum_probs=134.4
Q ss_pred eEEEECCC---CCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSS---GRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spd---g~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
++++|+|+ |++|++|+. .|++++|+|++.+|++|+.||.|++||+.++..+.
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee
Confidence 99999999 699999886 79999999999999999999999999999887665
Q ss_pred EeecCCCCeEEEEE--ecCCCEEEEecCCCeEEEEEcCCCeeeEee----------------------------------
Q 040274 104 KMLYHQGPVSALAF--HPNGHLMATTGKECKIKIWDLRKYEVLQTL---------------------------------- 147 (359)
Q Consensus 104 ~~~~h~~~v~~l~~--~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---------------------------------- 147 (359)
+..|...|++++| +|++.+|++++.|+.|++||+++++++..+
T Consensus 123 -~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 123 -IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP 201 (368)
T ss_dssp -EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC
T ss_pred -eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc
Confidence 5689999999999 889999999999999999998765422111
Q ss_pred --------------------------------------------------------cC---------------CceeEEE
Q 040274 148 --------------------------------------------------------TG---------------HAKTLDF 156 (359)
Q Consensus 148 --------------------------------------------------------~~---------------~v~~~~~ 156 (359)
.+ .|++++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 281 (368)
T 3mmy_A 202 SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF 281 (368)
T ss_dssp EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE
T ss_pred chhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE
Confidence 00 4788999
Q ss_pred cCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 157 SQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 157 s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
+|+| +++++.||.|++||+... .....+..|.. .|.+++|+|+|.+|++|+.|+
T Consensus 282 sp~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~----~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 282 HPVHGTLATVGSDGRFSFWDKDAR-TKLKTSEQLDQ----PISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTT-EEEEECCCCSS----CEEEEEECTTSSCEEEEECCC
T ss_pred ecCCCEEEEEccCCeEEEEECCCC-cEEEEecCCCC----CceEEEECCCCCeEEEEeccc
Confidence 9999 788889999999997654 55555555543 899999999999999999887
No 66
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=3.7e-22 Score=188.07 Aligned_cols=170 Identities=14% Similarity=0.162 Sum_probs=140.4
Q ss_pred eEEEECCCCC-EEEEecc------------------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC
Q 040274 52 ILWILPSSGR-YMAVAGR------------------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTS 99 (359)
Q Consensus 52 ~~l~~spdg~-~l~~~~~------------------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~ 99 (359)
++++|+|++. +|++|+. .|.+++|+| ++.+|++|+.||.|++||++++
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp CCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred EEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 8999999999 8888875 589999999 7789999999999999999987
Q ss_pred ---cceEEeecCCCCeEEEEEecCCC-EEEEecCCCeEEEEEcCC-CeeeEee---cCCceeEEEcCCC---cEEEEcCC
Q 040274 100 ---ALLIKMLYHQGPVSALAFHPNGH-LMATTGKECKIKIWDLRK-YEVLQTL---TGHAKTLDFSQKG---LLAVGTGS 168 (359)
Q Consensus 100 ---~~~~~~~~h~~~v~~l~~~p~g~-~l~s~~~d~~i~vwd~~~-~~~~~~~---~~~v~~~~~s~~g---l~~~~~d~ 168 (359)
.++..+..|...|++++|+|++. +|++|+.||.|++||+++ ..++..+ .+.|++++|+|++ +++++.|+
T Consensus 265 ~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 265 NTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp CSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 57778889999999999999887 689999999999999998 4566666 4568999999998 67778899
Q ss_pred cEEEEcCCCCCcc----------ccccccccCCCCcceeEEEEccCCC-EEEEEeCCCeEEEEEc
Q 040274 169 FAQILGDFSGSHN----------YSRYMGNSMVKGYQIGKVSFRPYED-VLGIGHSMGWSGILVP 222 (359)
Q Consensus 169 ~i~v~d~~~~~~~----------~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~~dg~~~i~~~ 222 (359)
.|.|||+...... ...+..+.. |...|.+++|+|++. +|++++.||.+.||..
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 9999997653211 122223322 445899999999999 8899998887777654
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.90 E-value=1.5e-22 Score=187.20 Aligned_cols=165 Identities=18% Similarity=0.185 Sum_probs=133.9
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCC-EEEEEeCCCeEEEEeCCC----CcceEE
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNG-VVSLGHSGGTVTMWKPTT----SALLIK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~-~l~tg~~dg~v~lwd~~~----~~~~~~ 104 (359)
.+++|+|+|++|++|+. .|.+++|+|++. +|++|+.||.|++||+.+ +.++..
T Consensus 167 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE
T ss_pred EEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE
Confidence 78999999999999876 799999999998 999999999999999987 555555
Q ss_pred eecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCeeeEeec--------------------CCceeEEEcCCC-cE
Q 040274 105 MLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYEVLQTLT--------------------GHAKTLDFSQKG-LL 162 (359)
Q Consensus 105 ~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~~~~~~~--------------------~~v~~~~~s~~g-l~ 162 (359)
+ +|...|++++|+| ++.+|++++.|+.|++||++++..+..+. +.+..++|+|+| +
T Consensus 247 ~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~- 324 (383)
T 3ei3_B 247 M-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL- 324 (383)
T ss_dssp E-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-
T ss_pred e-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-
Confidence 5 7999999999999 99999999999999999999877655542 122335666666 5
Q ss_pred EEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 163 AVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 163 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+++.|+.|++||+..+ .....+..+. +...+.+++|+|++.+|++|+ ||.+.||..
T Consensus 325 s~s~d~~i~iwd~~~~-~~~~~l~~~~--~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 325 LLNDKRTIDIYDANSG-GLVHQLRDPN--AAGIISLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CTTCCCCEEEEETTTC-CEEEEECBTT--BCSCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred ccCCCCeEEEEecCCC-ceeeeecCCC--CCceEEEEEEecCccEEEEec-CCcEEEEec
Confidence 6668999999997655 4555555432 233677889999999999997 887777764
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.90 E-value=5.2e-22 Score=186.36 Aligned_cols=149 Identities=16% Similarity=0.203 Sum_probs=123.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----ceEEeecCCCCeEEEEEecCC-CEEEE--ecCCCeEEEEEcCCC
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA----LLIKMLYHQGPVSALAFHPNG-HLMAT--TGKECKIKIWDLRKY 141 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~----~~~~~~~h~~~v~~l~~~p~g-~~l~s--~~~d~~i~vwd~~~~ 141 (359)
.+.++.|+|++.++++++.||.|++|+..++. .+..+..|.+.|.+++|+|++ .++++ |+.|++|++||+.++
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred ceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 67889999999999999999999999998764 355677899999999999965 45554 457999999999999
Q ss_pred eeeEee--cCCceeEEEcCCC--cEEEE--cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 142 EVLQTL--TGHAKTLDFSQKG--LLAVG--TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 142 ~~~~~~--~~~v~~~~~s~~g--l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
.++..+ ...+.++.|+|++ +++++ .|+.|+|||+.+. ..+..+.+|.. .|++++|+|+|.+|++|+.||
T Consensus 312 ~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~gH~~----~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 312 ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTS----RVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSS----CEEEEEECTTSSCEEEEETTT
T ss_pred ccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCC
Confidence 998888 4568999999998 55554 5899999997554 56667777754 899999999999999999999
Q ss_pred eEEEEEc
Q 040274 216 WSGILVP 222 (359)
Q Consensus 216 ~~~i~~~ 222 (359)
.++||..
T Consensus 387 tvriWdv 393 (420)
T 4gga_A 387 TLRLWRC 393 (420)
T ss_dssp EEEEECC
T ss_pred eEEEEEC
Confidence 7776643
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.9e-22 Score=206.59 Aligned_cols=170 Identities=9% Similarity=0.029 Sum_probs=143.1
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~ 109 (359)
++++|+|+|++||+|+. .|.+++|+| +.+|++++.|++|++||+.+++++..+. |.
T Consensus 21 ~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~ 98 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VP 98 (902)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CC
Confidence 89999999999999985 689999999 8899999999999999999999888885 77
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeee-----------Eee---cCCceeEEEcCCC---cEEEEcCCcEEE
Q 040274 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL-----------QTL---TGHAKTLDFSQKG---LLAVGTGSFAQI 172 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~-----------~~~---~~~v~~~~~s~~g---l~~~~~d~~i~v 172 (359)
+.|++++|+|++.+|++|+.||+|++||+.++.+. ..+ .+.|++++|+|++ +++++.|+.| +
T Consensus 99 ~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-l 177 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-T 177 (902)
T ss_dssp SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-E
T ss_pred CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-E
Confidence 89999999999999999999999999999988753 111 3568999999974 7778889999 9
Q ss_pred EcCCCCCccccccccc---------------cCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 173 LGDFSGSHNYSRYMGN---------------SMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 173 ~d~~~~~~~~~~~~~~---------------~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
||+... .....+..| .. +...|++++|+|+|.+|++|+.||.+.+|....+.
T Consensus 178 Wd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~-h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 178 YSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEK-RTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EETTTT-EEEEEECCCBCTTCCCSTTCCCTTSC-BCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EECCCC-ceEEEEecccCCcCCCcccccccccc-cCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 997654 333333333 01 23479999999999999999999999999876554
No 70
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=3.8e-22 Score=178.75 Aligned_cols=166 Identities=14% Similarity=0.095 Sum_probs=125.8
Q ss_pred eEEEECCCCCEEEEecc---ceeEEEEcC---CCCEEEEEeCCCeEEEEeCCCCcceEEeecCC---CCeEEEEEecCCC
Q 040274 52 ILWILPSSGRYMAVAGR---RTDLMRVNP---FNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ---GPVSALAFHPNGH 122 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---~v~~l~~sp---~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~---~~v~~l~~~p~g~ 122 (359)
..++++|+|+.+++... .++.++|+| ++.+|++|+.|++|+|||+.+++++.++.+|. ..+.+++|+|+|.
T Consensus 160 ~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~ 239 (356)
T 2w18_A 160 EVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL 239 (356)
T ss_dssp EEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE
T ss_pred EEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC
Confidence 57888999988775221 688888888 67999999999999999999999999998654 3677889999998
Q ss_pred EE------------EEecCCCeEEEEEcCCCeeeEee-----cCCc-eeEEEcCCC--cEEEEcCCcEEEEcCCCCCccc
Q 040274 123 LM------------ATTGKECKIKIWDLRKYEVLQTL-----TGHA-KTLDFSQKG--LLAVGTGSFAQILGDFSGSHNY 182 (359)
Q Consensus 123 ~l------------~s~~~d~~i~vwd~~~~~~~~~~-----~~~v-~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~ 182 (359)
++ ++|+.|++|++||..++..+..+ .++. ..+..+.++ +++++.|++|+|||+.++ ...
T Consensus 240 ~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tG-k~l 318 (356)
T 2w18_A 240 LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLG-QCT 318 (356)
T ss_dssp EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTC-SEE
T ss_pred EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCC-cEE
Confidence 76 56788999999999999887654 2331 122222235 667778999999997655 566
Q ss_pred cccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 183 SRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 183 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
..+.+|.. ..+.+++|+|||.+|++|+.|+.++||.
T Consensus 319 ~tL~gH~~---~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 319 ALLPPVSD---QHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEECCC-----CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEecCCCC---CeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 66766632 2345689999999999999999888775
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.90 E-value=4.4e-22 Score=185.58 Aligned_cols=148 Identities=18% Similarity=0.276 Sum_probs=128.3
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC-------cceEEeecCCCCeEEEEEecCC-CEEEEecCCCeEEEEEcC
Q 040274 69 RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTS-------ALLIKMLYHQGPVSALAFHPNG-HLMATTGKECKIKIWDLR 139 (359)
Q Consensus 69 ~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~-------~~~~~~~~h~~~v~~l~~~p~g-~~l~s~~~d~~i~vwd~~ 139 (359)
.|++++|+| ++.+|++|+.||.|++||+.++ .++..+.+|...|++++|+|++ .+|++++.|+.|++||+.
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 799999999 8999999999999999999987 6788899999999999999998 699999999999999999
Q ss_pred CCeeeEee--c---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccccc-ccccCCCCcceeEEEEccCCCEEEEE
Q 040274 140 KYEVLQTL--T---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRY-MGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 140 ~~~~~~~~--~---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
+++.+..+ . +.|.+++|+|+| +++++.|+.|++||+... .....+ ..|. +..+.++.|+|++.+|++|
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG-TVVAEKDRPHE---GTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-EEEEEEECSSC---SSSCCEEEECSTTEEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC-ceeeeeccCCC---CCcceEEEEcCCCcEEEEe
Confidence 99988777 3 458999999999 788889999999997654 444444 4553 2348999999999999999
Q ss_pred ---eCCCeEEEE
Q 040274 212 ---HSMGWSGIL 220 (359)
Q Consensus 212 ---~~dg~~~i~ 220 (359)
+.++.+.+|
T Consensus 239 ~~~~~d~~i~iw 250 (402)
T 2aq5_A 239 FSRMSERQVALW 250 (402)
T ss_dssp ECTTCCEEEEEE
T ss_pred ccCCCCceEEEE
Confidence 788887774
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=9.1e-23 Score=184.33 Aligned_cols=168 Identities=13% Similarity=0.092 Sum_probs=136.8
Q ss_pred eEEEECC--CCCEEEEecc-------------------------ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCcc-
Q 040274 52 ILWILPS--SGRYMAVAGR-------------------------RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTSAL- 101 (359)
Q Consensus 52 ~~l~~sp--dg~~l~~~~~-------------------------~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~~~- 101 (359)
++++|+| +|++|++|+. .|.+++|+|+ +.+|++|+.||+|++||+.++..
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred EEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence 8899976 4899999875 5889999997 78999999999999999987632
Q ss_pred --eEEeecCCCCeEEEEEecC-----------------CCEEEEecCCCeEEEEEcCCC---eeeEeec---CCceeEEE
Q 040274 102 --LIKMLYHQGPVSALAFHPN-----------------GHLMATTGKECKIKIWDLRKY---EVLQTLT---GHAKTLDF 156 (359)
Q Consensus 102 --~~~~~~h~~~v~~l~~~p~-----------------g~~l~s~~~d~~i~vwd~~~~---~~~~~~~---~~v~~~~~ 156 (359)
...+.+|...|.+++|+|+ +.+|++|+.|++|++||++.. .++..+. +.|.+++|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 3455689999999999997 468999999999999999754 4555664 45899999
Q ss_pred cCCC------cEEEEcCCcEEEEcCCCCC---ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 157 SQKG------LLAVGTGSFAQILGDFSGS---HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 157 s~~g------l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+|++ +++++.|++|+|||+.... .....+..|. ..|.+++|+|++.+|++|+.||.+++|...
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~----~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN----DVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECS----SCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCC----CcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9974 7889999999999975421 1122333443 389999999999999999999999999764
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6.4e-22 Score=184.37 Aligned_cols=168 Identities=9% Similarity=0.137 Sum_probs=141.1
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce-------
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL------- 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~------- 102 (359)
.+++|+|+|++|++++. .|.+++|+|++.+|++++.||.|++||+.++..+
T Consensus 112 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence 78889999999888875 7888999998888999988999988888765433
Q ss_pred -------------------------------------------------EEeecCCCCeEEEEEecCCCEEEEecCCCeE
Q 040274 103 -------------------------------------------------IKMLYHQGPVSALAFHPNGHLMATTGKECKI 133 (359)
Q Consensus 103 -------------------------------------------------~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i 133 (359)
..+..|...|++++|+|++.+|++++.|+.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 3444678899999999999999999999999
Q ss_pred EEEEcCCCeeeEee---cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEE
Q 040274 134 KIWDLRKYEVLQTL---TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLG 209 (359)
Q Consensus 134 ~vwd~~~~~~~~~~---~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 209 (359)
++||+++++.+..+ ...+.+++|+|++ +++++.|+.|++||+... .....+..|.. .|.+++|+|++.+|+
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~----~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN-TLLALSIVDGV----PIFAGRISQDGQKYA 346 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTT-EEEEEEECTTC----CEEEEEECTTSSEEE
T ss_pred EEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCC-cEeEecccCCc----cEEEEEEcCCCCEEE
Confidence 99999998887777 4568999999999 888999999999997554 45555555533 899999999999999
Q ss_pred EEeCCCeEEEEEcCC
Q 040274 210 IGHSMGWSGILVPRS 224 (359)
Q Consensus 210 ~g~~dg~~~i~~~gs 224 (359)
+|+.||.+.+|....
T Consensus 347 ~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 347 VAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEETTSCEEEEECHH
T ss_pred EEECCCeEEEEECCC
Confidence 999999888886543
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=1.4e-21 Score=176.92 Aligned_cols=165 Identities=14% Similarity=0.197 Sum_probs=142.6
Q ss_pred eEEEECCC-CCEEEEecc----------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce
Q 040274 52 ILWILPSS-GRYMAVAGR----------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL 102 (359)
Q Consensus 52 ~~l~~spd-g~~l~~~~~----------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~ 102 (359)
++|+|+|+ +++|++|+. .|.+++|+|++.+|++|+.|+.|++|+.......
T Consensus 42 ~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 42 TQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp EEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccccee
Confidence 99999997 689999886 6899999999999999999999999999998888
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee----cCCceeEEEcCCC----cEEEEcCCcEEEEc
Q 040274 103 IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL----TGHAKTLDFSQKG----LLAVGTGSFAQILG 174 (359)
Q Consensus 103 ~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~v~~~~~s~~g----l~~~~~d~~i~v~d 174 (359)
.....+...+..+.+++++.+|++++.|+.+++||+......... ...+.+++|++++ +++++.|+.|++||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 888889999999999999999999999999999999876543332 3457899999876 56788899999999
Q ss_pred CCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 175 DFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+... .....+..|.. .|++++|+|++.+|++|+.||.+.+|.
T Consensus 202 ~~~~-~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 202 LANC-KLKTNHIGHTG----YLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp TTTT-EEEEEECCCSS----CEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred CCCC-ceeeEecCCCC----cEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 6554 55555666644 899999999999999999999988853
No 75
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.89 E-value=7.3e-22 Score=183.05 Aligned_cols=152 Identities=15% Similarity=0.148 Sum_probs=129.8
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec---C---CCCeEEEEEecCCCEEEEecCC---CeEEEEEcCC
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY---H---QGPVSALAFHPNGHLMATTGKE---CKIKIWDLRK 140 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~---h---~~~v~~l~~~p~g~~l~s~~~d---~~i~vwd~~~ 140 (359)
|.+++|+|++ +|++|+.||.|++||+.++.++..+.. | ...|.+++|+|++.+|++++.| +.|++||+++
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 6789999999 999999999999999999999999998 9 9999999999999999999999 9999999999
Q ss_pred CeeeEeecC----------------CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccc------cc--------
Q 040274 141 YEVLQTLTG----------------HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYM------GN-------- 188 (359)
Q Consensus 141 ~~~~~~~~~----------------~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~------~~-------- 188 (359)
++++..+.+ .|.+++|+|++ +++++.|+.|++||+... .....+. .|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBC
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhccc
Confidence 988777743 47999999999 778888999999997654 4444444 33
Q ss_pred ----cCCCCcceeEEEEccCC----------CEEEEEeCCCeEEEEEcCC
Q 040274 189 ----SMVKGYQIGKVSFRPYE----------DVLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 189 ----~~~~~~~v~~~~~sp~~----------~~l~~g~~dg~~~i~~~gs 224 (359)
.. |...|++++|+|++ .+|++|+.||.+.+|...+
T Consensus 347 ~~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 347 EHGDSL-AEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTSCBC-SSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccc-cCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 00 14589999999998 7999999999888887544
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.89 E-value=1e-21 Score=182.08 Aligned_cols=172 Identities=20% Similarity=0.282 Sum_probs=141.3
Q ss_pred eEEEECC-CCCEEEEecc----------------------ceeEEEEcCCC---CEEEEEeCCCeEEEEeCCCCcceEEe
Q 040274 52 ILWILPS-SGRYMAVAGR----------------------RTDLMRVNPFN---GVVSLGHSGGTVTMWKPTTSALLIKM 105 (359)
Q Consensus 52 ~~l~~sp-dg~~l~~~~~----------------------~v~~l~~sp~~---~~l~tg~~dg~v~lwd~~~~~~~~~~ 105 (359)
.+++|+| ++.+|++++. .+.++.|+|.+ .++++|+.||.|++||+.++..+..+
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL 182 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee
Confidence 8999999 7888988875 67899998844 49999999999999999999999999
Q ss_pred ecCCCCeEEEEEecCCC-EEEEecCCCeEEEEEcCCCe-eeEee------------------cCCceeEEEcCCC--cEE
Q 040274 106 LYHQGPVSALAFHPNGH-LMATTGKECKIKIWDLRKYE-VLQTL------------------TGHAKTLDFSQKG--LLA 163 (359)
Q Consensus 106 ~~h~~~v~~l~~~p~g~-~l~s~~~d~~i~vwd~~~~~-~~~~~------------------~~~v~~~~~s~~g--l~~ 163 (359)
.+|.+.|++++|+|++. +|++++.||.|++||++++. ++..+ .+.|.+++|+|+| +++
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE
Confidence 99999999999999998 58999999999999998764 23322 3458999999999 788
Q ss_pred EEcCCcEEEEcCCCCCcc----------------------------------------------ccccccccCCCCccee
Q 040274 164 VGTGSFAQILGDFSGSHN----------------------------------------------YSRYMGNSMVKGYQIG 197 (359)
Q Consensus 164 ~~~d~~i~v~d~~~~~~~----------------------------------------------~~~~~~~~~~~~~~v~ 197 (359)
++.|+.|++||+...... ...+.. |...|+
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~v~ 338 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG----HYKTVD 338 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC----CSSCEE
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc----CCCeEE
Confidence 889999999997654211 111122 445899
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEcCCCCC
Q 040274 198 KVSFRPYEDVLGIGHSMGWSGILVPRSSEP 227 (359)
Q Consensus 198 ~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~ 227 (359)
+++|+|++.+|++|+.||.+.+|.......
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 999999999999999999999988776543
No 77
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=4.5e-22 Score=180.59 Aligned_cols=169 Identities=11% Similarity=-0.002 Sum_probs=143.9
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCC-EEEEEeCCCeEEEEeC-CCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNG-VVSLGHSGGTVTMWKP-TTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~-~l~tg~~dg~v~lwd~-~~~~~~~ 103 (359)
++++|+|+|.+|++++. .|++++|+|++. +|++|+.||.|++||+ .++. ..
T Consensus 15 ~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-~~ 93 (342)
T 1yfq_A 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS-FQ 93 (342)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS-EE
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc-eE
Confidence 89999999999999876 799999999999 9999999999999999 7765 46
Q ss_pred Eeec--CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC---------CeeeEee--cCCceeEEEcCCCcEEEEcCCcE
Q 040274 104 KMLY--HQGPVSALAFHPNGHLMATTGKECKIKIWDLRK---------YEVLQTL--TGHAKTLDFSQKGLLAVGTGSFA 170 (359)
Q Consensus 104 ~~~~--h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~---------~~~~~~~--~~~v~~~~~s~~gl~~~~~d~~i 170 (359)
.+.+ |...|++++|+| +.+|++++.|+.|++||+++ ++++..+ .+.+.+++|+|+++++++.++.|
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 172 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQV 172 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEE
T ss_pred eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeE
Confidence 7778 999999999999 99999999999999999987 6666555 56789999999998899999999
Q ss_pred EEEcCCC-CCccccccccccCCCCcceeEEEEcc-CCCEEEEEeCCCeEEEEEcCCC
Q 040274 171 QILGDFS-GSHNYSRYMGNSMVKGYQIGKVSFRP-YEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 171 ~v~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
.+||+.. ........... +...|.+++|+| ++.+|++|+.+|.+.+|.....
T Consensus 173 ~i~d~~~~~~~~~~~~~~~---~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESG---LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEESSCCTTCCCEEEECS---CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred EEEECCccccccceeeecC---CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 9999766 32222222211 334799999999 9999999999999999876554
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1.1e-21 Score=179.13 Aligned_cols=155 Identities=13% Similarity=0.209 Sum_probs=130.9
Q ss_pred ceeEEEEcCC----CCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCee
Q 040274 69 RTDLMRVNPF----NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYEV 143 (359)
Q Consensus 69 ~v~~l~~sp~----~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~~ 143 (359)
.|++++|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|++++|+| ++.+|++++.||.|++||+++++.
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence 3899999998 66999999999999999999999999999999999999999 999999999999999999999988
Q ss_pred eEee------cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccccccc-------------------------ccC
Q 040274 144 LQTL------TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMG-------------------------NSM 190 (359)
Q Consensus 144 ~~~~------~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~-------------------------~~~ 190 (359)
+..+ ...|.+++|+|++ +++++.|+.|++||+... .....+.. ...
T Consensus 151 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 151 VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK-RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH-HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC-ccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 7776 3458999999999 888889999999997643 22221111 000
Q ss_pred CCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCCC
Q 040274 191 VKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEP 227 (359)
Q Consensus 191 ~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~ 227 (359)
+...|.+++|+ +++|++++.||.+.+|.......
T Consensus 230 -~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 230 -HRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp -CSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTC
T ss_pred -CcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccc
Confidence 33479999998 78999999999999998876654
No 79
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.89 E-value=7e-22 Score=180.07 Aligned_cols=164 Identities=12% Similarity=0.125 Sum_probs=134.6
Q ss_pred eEEEECCCCCEEEEec-----c-----------------------ceeEEEEcCC---CCEEEEEeCCCeEEEEeCCCCc
Q 040274 52 ILWILPSSGRYMAVAG-----R-----------------------RTDLMRVNPF---NGVVSLGHSGGTVTMWKPTTSA 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~-----~-----------------------~v~~l~~sp~---~~~l~tg~~dg~v~lwd~~~~~ 100 (359)
++++|+|+|..+++++ . .|++++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 22 ~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 101 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE 101 (357)
T ss_dssp EEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS
T ss_pred EEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC
Confidence 8999999997665444 3 7999999998 6999999999999999999987
Q ss_pred -ceEEeecCCCCeEEEEE------ecCCCEEEEecCCCeEEEEEcCCCe-eeEee---cC----CceeEE----EcCCC-
Q 040274 101 -LLIKMLYHQGPVSALAF------HPNGHLMATTGKECKIKIWDLRKYE-VLQTL---TG----HAKTLD----FSQKG- 160 (359)
Q Consensus 101 -~~~~~~~h~~~v~~l~~------~p~g~~l~s~~~d~~i~vwd~~~~~-~~~~~---~~----~v~~~~----~s~~g- 160 (359)
++..+.+|...|+++.| +|++.+|++++.|+.|++||+.++. ++..+ .+ .+.+++ |+|++
T Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 102 MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER 181 (357)
T ss_dssp SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC
T ss_pred ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC
Confidence 88899999999999955 6799999999999999999999876 66666 22 577777 77888
Q ss_pred -cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEcc---CCCEEEEEeCCCeEEEEE
Q 040274 161 -LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP---YEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~g~~dg~~~i~~ 221 (359)
+++++.++.|++||+.... . .....|. ..|.+++|+| ++.+|++|+.||.+.+|.
T Consensus 182 ~l~~~~~d~~i~i~d~~~~~-~-~~~~~~~----~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 182 VVCAGYDNGDIKLFDLRNMA-L-RWETNIK----NGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp EEEEEETTSEEEEEETTTTE-E-EEEEECS----SCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred EEEEEccCCeEEEEECccCc-e-eeecCCC----CceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 7778888999999976552 2 2223333 3799999999 999999999999877753
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=184.72 Aligned_cols=180 Identities=10% Similarity=0.105 Sum_probs=140.9
Q ss_pred eEEEECCCCCEEEEecc--------------------------------c--------------eeEEEEcCCC--CEEE
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------------R--------------TDLMRVNPFN--GVVS 83 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------------~--------------v~~l~~sp~~--~~l~ 83 (359)
.+++|+|+|++|++|+. . |++++|+|++ ..|+
T Consensus 32 ~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~ 111 (447)
T 3dw8_B 32 STVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFL 111 (447)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEE
Confidence 89999999999999875 1 8889999988 7999
Q ss_pred EEeCCCeEEEEeCCCCcce---------------------------------------EE-eecCCCCeEEEEEecCCCE
Q 040274 84 LGHSGGTVTMWKPTTSALL---------------------------------------IK-MLYHQGPVSALAFHPNGHL 123 (359)
Q Consensus 84 tg~~dg~v~lwd~~~~~~~---------------------------------------~~-~~~h~~~v~~l~~~p~g~~ 123 (359)
+|+.||+|++||+.++... .. ..+|...|++++|+|++.+
T Consensus 112 s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 191 (447)
T 3dw8_B 112 LSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYET 191 (447)
T ss_dssp EEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSE
T ss_pred EeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCE
Confidence 9999999999998764331 12 3579999999999999999
Q ss_pred EEEecCCCeEEEEEcCC-CeeeEe-------e---cCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCcc---ccccc
Q 040274 124 MATTGKECKIKIWDLRK-YEVLQT-------L---TGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHN---YSRYM 186 (359)
Q Consensus 124 l~s~~~d~~i~vwd~~~-~~~~~~-------~---~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~---~~~~~ 186 (359)
|++| .|+.|++||+.+ +..+.. + ...|++++|+|+| +++++.|+.|++||+...... ...+.
T Consensus 192 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE 270 (447)
T ss_dssp EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC
T ss_pred EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec
Confidence 9998 799999999994 444442 2 3458999999997 788889999999997665321 33344
Q ss_pred cccCC--------CCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCCCceeeec
Q 040274 187 GNSMV--------KGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWV 233 (359)
Q Consensus 187 ~~~~~--------~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~~~~~~~ 233 (359)
.|... +...|.+++|+|+|.+|++++. |.+.+|........+..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 271 EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 33200 0126999999999999999999 9999998876344444444
No 81
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-21 Score=185.71 Aligned_cols=151 Identities=6% Similarity=0.010 Sum_probs=128.8
Q ss_pred eeEEEEcCCCCEE-EEEeCCCeEEEEeCC--CCcceEEee--cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeee
Q 040274 70 TDLMRVNPFNGVV-SLGHSGGTVTMWKPT--TSALLIKML--YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144 (359)
Q Consensus 70 v~~l~~sp~~~~l-~tg~~dg~v~lwd~~--~~~~~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~ 144 (359)
|++++|+|++.+| ++|+.||.|++||+. ++..+..+. .|...|++++|+|++.+|++++.||.|++||+.++...
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEE 184 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCS
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccc
Confidence 8899999999996 899999999999999 888888876 66789999999999999999999999999999887644
Q ss_pred E----ee---cCCceeEEEcCC---C--cEEEEcCCcEEEEcCCCCCccccc-cccccCCCCcceeEEEEccCCCEEEEE
Q 040274 145 Q----TL---TGHAKTLDFSQK---G--LLAVGTGSFAQILGDFSGSHNYSR-YMGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 145 ~----~~---~~~v~~~~~s~~---g--l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
. .+ .+.|++++|+|+ + +++++.|+.|++||+... ..... +.+|. ..|.+++|+ ++.+|++|
T Consensus 185 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~h~----~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 185 KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-FIVDKWLFGHK----HFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-TCEEEECCCCS----SCEEEEEEC-STTEEEEE
T ss_pred cccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-ceeeeeecCCC----CceEEEEEC-CCCEEEEE
Confidence 3 33 456899999999 7 788889999999997655 33333 44554 389999999 99999999
Q ss_pred eCCCeEEEEEcCCCC
Q 040274 212 HSMGWSGILVPRSSE 226 (359)
Q Consensus 212 ~~dg~~~i~~~gs~~ 226 (359)
+.|+.+.+|...++.
T Consensus 259 ~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 259 GGDDKIFAWDWKTGK 273 (450)
T ss_dssp ESSSEEEEEETTTCC
T ss_pred eCCCeEEEEECCCCc
Confidence 999999999876654
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.8e-21 Score=181.31 Aligned_cols=164 Identities=13% Similarity=0.230 Sum_probs=143.4
Q ss_pred eEEEECCCCC-EEEEecc-------------------------------------------ceeEEEEcCCCCEEEEEeC
Q 040274 52 ILWILPSSGR-YMAVAGR-------------------------------------------RTDLMRVNPFNGVVSLGHS 87 (359)
Q Consensus 52 ~~l~~spdg~-~l~~~~~-------------------------------------------~v~~l~~sp~~~~l~tg~~ 87 (359)
.+++|+|+|+ +|++|+. .|++++|+|++.+|++|+.
T Consensus 49 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 128 (425)
T 1r5m_A 49 VSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE 128 (425)
T ss_dssp SEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeC
Confidence 8999999999 9988764 3778999999999999999
Q ss_pred CCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CC--------------
Q 040274 88 GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GH-------------- 150 (359)
Q Consensus 88 dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~-------------- 150 (359)
||.|++|| .++..+..+.+|...|++++|+|++.+|++++.|+.|++||+.+++.+..+. ..
T Consensus 129 dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (425)
T 1r5m_A 129 NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGS 207 (425)
T ss_dssp TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CC
T ss_pred CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcc
Confidence 99999999 6678888899999999999999999999999999999999999998887772 22
Q ss_pred -ceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 151 -AKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 151 -v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+.+++|+|++ +++++.++.|.+||+... .....+..|.. .|.+++|+|++.+|++++.||.+.+|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~-~~~~~~~~~~~----~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 208 LGVDVEWVDDDKFVIPGPKGAIFVYQITEK-TPTGKLIGHHG----PISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp CBSCCEEEETTEEEEECGGGCEEEEETTCS-SCSEEECCCSS----CEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eeeEEEEcCCCEEEEEcCCCeEEEEEcCCC-ceeeeeccCCC----ceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 8899999999 889999999999997654 45555555543 899999999999999999999888753
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.89 E-value=1.5e-21 Score=183.94 Aligned_cols=169 Identities=14% Similarity=0.140 Sum_probs=141.2
Q ss_pred eEEEECCC-CCEEEEecc---------------------------------ceeEEEEcCCCC-EEEEEeCCCeEEEEeC
Q 040274 52 ILWILPSS-GRYMAVAGR---------------------------------RTDLMRVNPFNG-VVSLGHSGGTVTMWKP 96 (359)
Q Consensus 52 ~~l~~spd-g~~l~~~~~---------------------------------~v~~l~~sp~~~-~l~tg~~dg~v~lwd~ 96 (359)
++++|+|+ +.+|++++. .|.+++|+|++. +|++|+.||.|++||+
T Consensus 132 ~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 211 (430)
T 2xyi_A 132 NRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDI 211 (430)
T ss_dssp SEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEET
T ss_pred EEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeC
Confidence 99999997 678888764 578999999888 9999999999999999
Q ss_pred CCCcc-------eEEeecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCC---eeeEee---cCCceeEEEcCCC--
Q 040274 97 TTSAL-------LIKMLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKY---EVLQTL---TGHAKTLDFSQKG-- 160 (359)
Q Consensus 97 ~~~~~-------~~~~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~---~~~~~~---~~~v~~~~~s~~g-- 160 (359)
.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||++++ .++..+ ...|++++|+|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 291 (430)
T 2xyi_A 212 NATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF 291 (430)
T ss_dssp TSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTT
T ss_pred CCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCC
Confidence 87422 456678999999999999 7889999999999999999986 455555 4568999999988
Q ss_pred -cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCC-EEEEEeCCCeEEEEEcCC
Q 040274 161 -LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED-VLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~~dg~~~i~~~gs 224 (359)
+++++.|+.|.+||+.........+..|.. .|++++|+|++. +|++++.||.+.||....
T Consensus 292 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~----~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNLKLKLHSFESHKD----EIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEECCSS----CEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEEEeCCCeEEEEeCCCCCCCeEEeecCCC----CEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 567888999999998765555666666644 899999999995 688999999888887644
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.89 E-value=5e-21 Score=177.47 Aligned_cols=173 Identities=14% Similarity=0.128 Sum_probs=144.3
Q ss_pred eEEEECC-CCCEEEEecc------------------------------------ceeEEEEcC-CCCEEEEEeCCCeEEE
Q 040274 52 ILWILPS-SGRYMAVAGR------------------------------------RTDLMRVNP-FNGVVSLGHSGGTVTM 93 (359)
Q Consensus 52 ~~l~~sp-dg~~l~~~~~------------------------------------~v~~l~~sp-~~~~l~tg~~dg~v~l 93 (359)
.+++|+| +|++|++|+. .|.+++|+| ++.+|++|+.||.|++
T Consensus 47 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 126 (408)
T 4a11_B 47 NTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKV 126 (408)
T ss_dssp EEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEE
T ss_pred EEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEE
Confidence 9999999 9999999875 589999999 7789999999999999
Q ss_pred EeCCCCcceEEeecCCCCeEEEEEec---CCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC---cEEE
Q 040274 94 WKPTTSALLIKMLYHQGPVSALAFHP---NGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG---LLAV 164 (359)
Q Consensus 94 wd~~~~~~~~~~~~h~~~v~~l~~~p---~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g---l~~~ 164 (359)
||+.++..+..+. +...+.++.|+| ++.++++++.|+.|++||++++..+..+ .+.|.+++|+|++ ++++
T Consensus 127 wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~ 205 (408)
T 4a11_B 127 WDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATA 205 (408)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEE
T ss_pred eeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEE
Confidence 9999998877775 788899999998 4559999999999999999999887777 3568999999998 5578
Q ss_pred EcCCcEEEEcCCCCCcccccccccc-----------CCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 165 GTGSFAQILGDFSGSHNYSRYMGNS-----------MVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 165 ~~d~~i~v~d~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
+.|+.|++||+.........+..+. ..+...|.+++|+|++.+|++++.||.+.+|....+
T Consensus 206 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 206 SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 8899999999866543332221100 014458999999999999999999999999986553
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.4e-21 Score=206.93 Aligned_cols=167 Identities=19% Similarity=0.234 Sum_probs=142.0
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
++++|+|||++|++|+. .|++++|+|++.+|++|+.||.|++||+.+++++..+.+|
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 89999999999999876 7999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEec--CCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcc
Q 040274 109 QGPVSALAFHP--NGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHN 181 (359)
Q Consensus 109 ~~~v~~l~~~p--~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~ 181 (359)
...|++++|+| ++.++++++.|+.|++||+.++.++..+ .+.|++++|+|+| +++++.||.|++||+......
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccc
Confidence 99999999999 5668999999999999999999988887 3568999999999 888889999999997543110
Q ss_pred ccccc----------------------------------------------------cccCCCCcceeEEEEccCCCEEE
Q 040274 182 YSRYM----------------------------------------------------GNSMVKGYQIGKVSFRPYEDVLG 209 (359)
Q Consensus 182 ~~~~~----------------------------------------------------~~~~~~~~~v~~~~~sp~~~~l~ 209 (359)
..+. .... +...|.+++|+|++.+++
T Consensus 779 -~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~ 856 (1249)
T 3sfz_A 779 -KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTG-HHSTIQYCDFSPYDHLAV 856 (1249)
T ss_dssp -EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECS-SSSCCCEEEECSSTTEEE
T ss_pred -ceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCC-CCCceEEEEEcCCCCEEE
Confidence 0000 0001 344788899999999999
Q ss_pred EEeCCCeEEEE
Q 040274 210 IGHSMGWSGIL 220 (359)
Q Consensus 210 ~g~~dg~~~i~ 220 (359)
+|+.+|.+.+|
T Consensus 857 ~~~~dg~v~vw 867 (1249)
T 3sfz_A 857 IALSQYCVELW 867 (1249)
T ss_dssp EECSSSCEEEE
T ss_pred EEeCCCeEEEE
Confidence 99998887764
No 86
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.4e-22 Score=180.25 Aligned_cols=167 Identities=13% Similarity=0.136 Sum_probs=135.5
Q ss_pred eEEEECC--CCCEEEEecc------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce-EE
Q 040274 52 ILWILPS--SGRYMAVAGR------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL-IK 104 (359)
Q Consensus 52 ~~l~~sp--dg~~l~~~~~------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~-~~ 104 (359)
.+++|+| +|++|++++. .|++++|+|++.+|++|+.||.|++||+.++..+ ..
T Consensus 129 ~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~ 208 (343)
T 3lrv_A 129 IYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR 208 (343)
T ss_dssp EEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE
T ss_pred EEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE
Confidence 8899999 9999998886 6899999999999999999999999999999887 77
Q ss_pred eec-CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec------CCce--eEEEcCCC--cEEEEc-CCcEEE
Q 040274 105 MLY-HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT------GHAK--TLDFSQKG--LLAVGT-GSFAQI 172 (359)
Q Consensus 105 ~~~-h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~------~~v~--~~~~s~~g--l~~~~~-d~~i~v 172 (359)
+.+ |.++|++++|+|+|.+|++++ |+.|++||++++..+..+. .++. +++|+|+| +++++. ++.|+|
T Consensus 209 ~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp CCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEE
Confidence 887 999999999999999999999 5599999999987665542 2233 59999999 556666 899999
Q ss_pred EcCCCCCccccccccccCCCCcceeEEEEcc---CCCEEEEEeCCCeEEEEEcCCCCCc
Q 040274 173 LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP---YEDVLGIGHSMGWSGILVPRSSEPN 228 (359)
Q Consensus 173 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~g~~dg~~~i~~~gs~~~~ 228 (359)
|++......... . ++..+.|+| +...|++++.||.+.+++....+.+
T Consensus 288 ~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~ 337 (343)
T 3lrv_A 288 YKFDKKTKNWTK---D------EESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSFN 337 (343)
T ss_dssp EEECTTTCSEEE---E------EEEECCC----CCCCEEEEEEETTEEEEEEECSSEEE
T ss_pred EEEcccccceEe---c------CceeEecCccccccceeEEEecCCceEEEEecCCeEe
Confidence 996544322221 1 678889999 8899999999999998886655433
No 87
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.6e-21 Score=177.95 Aligned_cols=155 Identities=10% Similarity=0.035 Sum_probs=121.5
Q ss_pred ceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCcceEEee-cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeee-
Q 040274 69 RTDLMRVNP--FNGVVSLGHSGGTVTMWKPTTSALLIKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL- 144 (359)
Q Consensus 69 ~v~~l~~sp--~~~~l~tg~~dg~v~lwd~~~~~~~~~~~-~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~- 144 (359)
.|.+++|+| ++.+|++|+.||+|++||+.++.++..+. .|...|++++|+|+|.+|++|+.||.|++||+++++.+
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS 206 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc
Confidence 599999999 99999999999999999999998876664 45568999999999999999999999999999998876
Q ss_pred Eeec----CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcce--eEEEEccCCCEEEEEeC-CCe
Q 040274 145 QTLT----GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQI--GKVSFRPYEDVLGIGHS-MGW 216 (359)
Q Consensus 145 ~~~~----~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v--~~~~~sp~~~~l~~g~~-dg~ 216 (359)
..+. +.|++++|+|+| +++++.++.|++||+... .....+..+.. +...+ .+++|+|+|.+|++++. ++.
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~s~~d~~ 284 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKD-VGTLAYPTYTI-PEFKTGTVTYDIDDSGKNMIAYSNESNS 284 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSS-TTCBSSCCCBC------CCEEEEECTTSSEEEEEETTTTE
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCC-Ccceeeccccc-ccccccceEEEECCCCCEEEEecCCCCc
Confidence 5553 458999999999 444444779999997665 33333322111 11133 46999999999999998 998
Q ss_pred EEEEEcCCC
Q 040274 217 SGILVPRSS 225 (359)
Q Consensus 217 ~~i~~~gs~ 225 (359)
+.+|.....
T Consensus 285 i~v~~~~~~ 293 (343)
T 3lrv_A 285 LTIYKFDKK 293 (343)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEccc
Confidence 999876443
No 88
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.88 E-value=2.2e-21 Score=175.25 Aligned_cols=110 Identities=16% Similarity=0.290 Sum_probs=97.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC----cceEEeecCCCCeEEEEEec--CCCEEEEecCCCeEEEEEcCCC-
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTS----ALLIKMLYHQGPVSALAFHP--NGHLMATTGKECKIKIWDLRKY- 141 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~----~~~~~~~~h~~~v~~l~~~p--~g~~l~s~~~d~~i~vwd~~~~- 141 (359)
.|++++|+|++.+|++|+.||.|++||+.++ ..+..+.+|...|++++|+| ++.+|++++.|+.|++||+.++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 7999999999999999999999999999876 35667789999999999999 6999999999999999999886
Q ss_pred --------eeeEee---cCCceeEEEcCC--C--cEEEEcCCcEEEEcCCCC
Q 040274 142 --------EVLQTL---TGHAKTLDFSQK--G--LLAVGTGSFAQILGDFSG 178 (359)
Q Consensus 142 --------~~~~~~---~~~v~~~~~s~~--g--l~~~~~d~~i~v~d~~~~ 178 (359)
.++..+ .+.+.+++|+|+ + +++++.|+.|++||+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred ccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 445555 456899999998 7 788889999999997544
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=2.6e-21 Score=180.43 Aligned_cols=169 Identities=14% Similarity=0.146 Sum_probs=138.3
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~ 107 (359)
.+++| ++++|++|+. .|.+++|+|++.+|++|+.||.|++||+.++.++..+..
T Consensus 180 ~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 257 (401)
T 4aez_A 180 GCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN 257 (401)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC
T ss_pred EEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC
Confidence 66677 5678888775 799999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCC-CEEEEec--CCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--cEEEE--cCCcEEEEcCCCC
Q 040274 108 HQGPVSALAFHPNG-HLMATTG--KECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAVG--TGSFAQILGDFSG 178 (359)
Q Consensus 108 h~~~v~~l~~~p~g-~~l~s~~--~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~~--~d~~i~v~d~~~~ 178 (359)
|...|.+++|+|++ .++++++ .|+.|++||+.+++++..+ ...+.+++|+|+| +++++ .++.|.+||+...
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 99999999999966 5566655 7999999999999988887 4569999999999 55533 6899999997553
Q ss_pred Ccc-ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 179 SHN-YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 179 ~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
... ...+..|. ..|.+++|+|+|.+|++|+.||.+.+|....++
T Consensus 338 ~~~~~~~~~~h~----~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 338 GLTKQVDIPAHD----TRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEEEECCS----SCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred cceeEEEecCCC----CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 211 11233443 489999999999999999999988888765544
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.88 E-value=1.7e-21 Score=183.39 Aligned_cols=155 Identities=11% Similarity=0.168 Sum_probs=124.5
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCC-CcceE-------EeecCCCCeEEEEEecCC-CEEEEecCCCeEEEEEcCC
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTT-SALLI-------KMLYHQGPVSALAFHPNG-HLMATTGKECKIKIWDLRK 140 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~-~~~~~-------~~~~h~~~v~~l~~~p~g-~~l~s~~~d~~i~vwd~~~ 140 (359)
|.+++|+|++.+|++| .||.|++||+.+ +..+. .+.+|...|++++|+|++ .+|++++.||.|++||+++
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC
Confidence 5689999999999999 799999999984 34443 255899999999999998 9999999999999999998
Q ss_pred Cee----eEeecC---------------CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCC------
Q 040274 141 YEV----LQTLTG---------------HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKG------ 193 (359)
Q Consensus 141 ~~~----~~~~~~---------------~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~------ 193 (359)
+.. +..+.+ .|.+++|+|+| +++++. +.|++||+.........+..|.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLY 337 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHH
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccc
Confidence 876 566632 78999999999 555555 99999998764566666666632000
Q ss_pred --c---ceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 194 --Y---QIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 194 --~---~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
. .+.+++|+|++.+|++|+.||.+.+|...++.
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 0 13349999999999999999999999876654
No 91
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.7e-21 Score=181.48 Aligned_cols=170 Identities=20% Similarity=0.252 Sum_probs=145.3
Q ss_pred eEEEECCC-CCEEEEecc--------------------------------ceeEEEEcCC-CCEEEEEeCCCeEEEEeCC
Q 040274 52 ILWILPSS-GRYMAVAGR--------------------------------RTDLMRVNPF-NGVVSLGHSGGTVTMWKPT 97 (359)
Q Consensus 52 ~~l~~spd-g~~l~~~~~--------------------------------~v~~l~~sp~-~~~l~tg~~dg~v~lwd~~ 97 (359)
.+++|+|+ +++|++++. .|.+++|+|+ +.+|++|+.||.|++||+.
T Consensus 117 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp CEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 89999998 899999875 5789999998 7899999999999999999
Q ss_pred CCcceEEeecC------CCCeEEEEEecCC-CEEEEecCCC---eEEEEEcCCC-eeeEeec----CCceeEEEcC-CC-
Q 040274 98 TSALLIKMLYH------QGPVSALAFHPNG-HLMATTGKEC---KIKIWDLRKY-EVLQTLT----GHAKTLDFSQ-KG- 160 (359)
Q Consensus 98 ~~~~~~~~~~h------~~~v~~l~~~p~g-~~l~s~~~d~---~i~vwd~~~~-~~~~~~~----~~v~~~~~s~-~g- 160 (359)
++..+..+..| ...|++++|+|++ .+|++++.|+ .|++||++++ .++..+. ..|++++|+| ++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC
Confidence 99988888876 7899999999997 6899999998 9999999986 5555554 4589999999 77
Q ss_pred -cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCC-CEEEEEeCCCeEEEEEcCCCC
Q 040274 161 -LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE-DVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~g~~dg~~~i~~~gs~~ 226 (359)
+++++.|+.|++||+... .....+..|.. .|.+++|+|++ .+|++++.||.+.+|......
T Consensus 277 ~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 277 LLLSSGRDNTVLLWNPESA-EQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CEEEEESSSEEEEECSSSC-CEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred eEEEEeCCCCEEEeeCCCC-ccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 788888999999997654 55556666644 79999999999 899999999998888765543
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.1e-21 Score=182.76 Aligned_cols=169 Identities=15% Similarity=0.099 Sum_probs=141.0
Q ss_pred eEEEECCCCCEE-EEecc---------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYM-AVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l-~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
.+++|+|+|++| ++|+. .|++++|+|++.+|++|+.||.|++|++.++....
T Consensus 106 ~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~ 185 (450)
T 2vdu_B 106 RNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK 185 (450)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc
Confidence 899999999997 77754 57899999999999999999999999998876544
Q ss_pred ----EeecCCCCeEEEEEecC---CCEEEEecCCCeEEEEEcCCCeeeEee----cCCceeEEEcCCC--cEEEEcCCcE
Q 040274 104 ----KMLYHQGPVSALAFHPN---GHLMATTGKECKIKIWDLRKYEVLQTL----TGHAKTLDFSQKG--LLAVGTGSFA 170 (359)
Q Consensus 104 ----~~~~h~~~v~~l~~~p~---g~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~v~~~~~s~~g--l~~~~~d~~i 170 (359)
.+.+|.+.|++++|+|+ +.+|++++.|+.|++||+.++.++..+ .+.|++++|+ +| +++++.|+.|
T Consensus 186 ~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v 264 (450)
T 2vdu_B 186 FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKI 264 (450)
T ss_dssp CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEE
T ss_pred ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeE
Confidence 77899999999999999 999999999999999999998877764 3568999999 88 8888899999
Q ss_pred EEEcCCCCCcccccccccc---------------------CCCCcceeEEEEccCCCEEEEEe-CCCeEEEEEc
Q 040274 171 QILGDFSGSHNYSRYMGNS---------------------MVKGYQIGKVSFRPYEDVLGIGH-SMGWSGILVP 222 (359)
Q Consensus 171 ~v~d~~~~~~~~~~~~~~~---------------------~~~~~~v~~~~~sp~~~~l~~g~-~dg~~~i~~~ 222 (359)
++||+..+ .....+..+. ......|.+++|+|++.+|++++ .++.+.+|..
T Consensus 265 ~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 265 FAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 99997665 3333222110 00223689999999999999999 8999999887
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8e-21 Score=169.83 Aligned_cols=163 Identities=15% Similarity=0.227 Sum_probs=139.3
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEe
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKM 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~ 105 (359)
.+++|+|+|++|++++. .|.++.| ++.+|++|+.||.|++|| .+..+..+
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence 88999999999999876 7888888 577999999999999999 67788888
Q ss_pred ecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCeeeEee----cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCC
Q 040274 106 LYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYEVLQTL----TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGS 179 (359)
Q Consensus 106 ~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~ 179 (359)
..|...|.++.|+| ++.+|++++.|+.|++||. ...+..+ ...+.+++|+|++ +++++.++.|++||+...
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~- 215 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG- 215 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC-
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch-
Confidence 89999999999998 9999999999999999994 4444444 4568999999999 999999999999997554
Q ss_pred ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 180 HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
.....+..|.. .|++++|+|++ .|++|+.||.+.+|....+.
T Consensus 216 ~~~~~~~~~~~----~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 216 DVLRTYEGHES----FVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CEEEEEECCSS----CEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred hhhhhhhcCCc----eEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 55555655544 89999999999 68999999999998765543
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.88 E-value=8.2e-21 Score=170.29 Aligned_cols=150 Identities=15% Similarity=0.156 Sum_probs=122.7
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc----eEEeecCCCCeEEEEEecCCCE---EEEecCCCeEEEEEcCCC
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSAL----LIKMLYHQGPVSALAFHPNGHL---MATTGKECKIKIWDLRKY 141 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~----~~~~~~h~~~v~~l~~~p~g~~---l~s~~~d~~i~vwd~~~~ 141 (359)
.+.++.+++++.+|++++.||.|++||+.+++. ......|.+.|.++.++|++.. +++++.+++|++||....
T Consensus 152 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~ 231 (318)
T 4ggc_A 152 EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 231 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC
T ss_pred ceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc
Confidence 678899999999999999999999999988753 3445578899999999996653 346778999999999988
Q ss_pred eeeEee--cCCceeEEEcCCC--cEEEE--cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 142 EVLQTL--TGHAKTLDFSQKG--LLAVG--TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 142 ~~~~~~--~~~v~~~~~s~~g--l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
...... ...+..+.|+|++ +++++ .|+.|+|||+.+. ..+..+.+|.. .|++++|+|+|.+|++|+.||
T Consensus 232 ~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~~~~l~gH~~----~V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 232 ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTS----RVLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSS----CEEEEEECTTSSCEEEEETTT
T ss_pred cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC-cEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCC
Confidence 776655 4568999999998 55544 6899999997654 56666777754 899999999999999999999
Q ss_pred eEEEEEcC
Q 040274 216 WSGILVPR 223 (359)
Q Consensus 216 ~~~i~~~g 223 (359)
.++||.-.
T Consensus 307 ~v~iWd~~ 314 (318)
T 4ggc_A 307 TLRLWRCF 314 (318)
T ss_dssp EEEEECCS
T ss_pred eEEEEECC
Confidence 87777543
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.8e-22 Score=189.71 Aligned_cols=170 Identities=11% Similarity=0.043 Sum_probs=134.8
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEE--EEcCCC-CEEEEEeCCCeEEEEeCCCCcceEE
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLM--RVNPFN-GVVSLGHSGGTVTMWKPTTSALLIK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l--~~sp~~-~~l~tg~~dg~v~lwd~~~~~~~~~ 104 (359)
.+++|+|++ +|++|+. .|+++ .|+|++ .+|++|+.||+|+|||+++++++..
T Consensus 270 ~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~ 348 (524)
T 2j04_B 270 TTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT 348 (524)
T ss_dssp EEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE
T ss_pred EEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc
Confidence 899999865 7888775 68888 568887 8999999999999999999888878
Q ss_pred eecCCC--CeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC--cEEEEcCCcEEEEcCCC
Q 040274 105 MLYHQG--PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG--LLAVGTGSFAQILGDFS 177 (359)
Q Consensus 105 ~~~h~~--~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~ 177 (359)
+.+|.. .|.+++|+|++..|++++.|++|++||++++.++.++ .+.|++++|||+| +++++.|++|++||+..
T Consensus 349 ~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 349 TVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 777764 5889999999999999999999999999998876666 4568999999999 88999999999998532
Q ss_pred CC----c---------cc-cc--------------------------cccccCCCCcceeEEEEccCCC---EEEEEeCC
Q 040274 178 GS----H---------NY-SR--------------------------YMGNSMVKGYQIGKVSFRPYED---VLGIGHSM 214 (359)
Q Consensus 178 ~~----~---------~~-~~--------------------------~~~~~~~~~~~v~~~~~sp~~~---~l~~g~~d 214 (359)
.- . .+ .. ..... .+...|.+++|+|++. +|++|+.+
T Consensus 429 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~-gh~~~V~~Vafsp~~~~~~~lAsg~~~ 507 (524)
T 2j04_B 429 RLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID-AHGINITCTKWNETSAGGKCYAFSNSA 507 (524)
T ss_dssp STTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTT
T ss_pred hhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeec-CCCceEEEEECCCCCCccHHHHhhccC
Confidence 10 0 00 00 00000 1445789999999854 89999999
Q ss_pred CeEEEEEcC
Q 040274 215 GWSGILVPR 223 (359)
Q Consensus 215 g~~~i~~~g 223 (359)
|.++||...
T Consensus 508 g~vrlw~l~ 516 (524)
T 2j04_B 508 GLLTLEYLS 516 (524)
T ss_dssp SEEEEEECS
T ss_pred ceEEEEEcc
Confidence 988888754
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.87 E-value=2.8e-21 Score=176.05 Aligned_cols=170 Identities=15% Similarity=0.193 Sum_probs=140.3
Q ss_pred eEEEECCC---CCEEEEecc------------------------ceeEEE------EcCCCCEEEEEeCCCeEEEEeCCC
Q 040274 52 ILWILPSS---GRYMAVAGR------------------------RTDLMR------VNPFNGVVSLGHSGGTVTMWKPTT 98 (359)
Q Consensus 52 ~~l~~spd---g~~l~~~~~------------------------~v~~l~------~sp~~~~l~tg~~dg~v~lwd~~~ 98 (359)
.+++|+|+ |.+|++|+. .|.++. |+|++.+|++|+.||.|++||+.+
T Consensus 69 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~ 148 (357)
T 3i2n_A 69 KCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQ 148 (357)
T ss_dssp EEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTS
T ss_pred EEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCC
Confidence 89999998 799999876 688885 578899999999999999999998
Q ss_pred Cc-ceEEeecCCC----CeEEEE----EecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcC---CC--cE
Q 040274 99 SA-LLIKMLYHQG----PVSALA----FHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQ---KG--LL 162 (359)
Q Consensus 99 ~~-~~~~~~~h~~----~v~~l~----~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~---~g--l~ 162 (359)
+. ++..+..|.+ .|.+++ |+|++.+|++++.|+.|++||+++++.+... ...+.+++|+| ++ ++
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 149 KDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEE
T ss_pred CCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEE
Confidence 86 6777776655 899998 6789999999999999999999998875544 56799999999 77 88
Q ss_pred EEEcCCcEEEEcCCCCCccccccc-----cccCCCCcceeEEEEccCCC-EEEEEeCCCeEEEEEcCCCC
Q 040274 163 AVGTGSFAQILGDFSGSHNYSRYM-----GNSMVKGYQIGKVSFRPYED-VLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 163 ~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~v~~~~~sp~~~-~l~~g~~dg~~~i~~~gs~~ 226 (359)
+++.|+.|++||+... .....+. .| ...|++++|+|++. +|++|+.||.+.+|....+.
T Consensus 229 ~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQ-HPTKGFASVSEKAH----KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEESTTEEEEEEEEEE-ETTTEEEEEEEECC----SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred EECCCCeEEEEeCcCC-CcccceeeeccCCC----cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 8889999999997554 3333332 44 34899999999998 89999999999999765443
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.6e-21 Score=183.95 Aligned_cols=162 Identities=8% Similarity=0.081 Sum_probs=132.4
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc-----
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSAL----- 101 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~----- 101 (359)
.+++|||||.+||+++. .|.+++|||+|++|++|+.||+|++||+.++..
T Consensus 89 ~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc
Confidence 99999999999998776 289999999999999999999999999998753
Q ss_pred --eEEe----ecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee---eEee----cCCceeEEEcCCCcEEEEcCC
Q 040274 102 --LIKM----LYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV---LQTL----TGHAKTLDFSQKGLLAVGTGS 168 (359)
Q Consensus 102 --~~~~----~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~---~~~~----~~~v~~~~~s~~gl~~~~~d~ 168 (359)
+.++ .+|...|.+++|+|+| +++++.|++|++||+..+.. .+++ ...|.+++|+ +..++++.++
T Consensus 169 i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~~~ 245 (588)
T 2j04_A 169 YFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTCPG 245 (588)
T ss_dssp EEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEECSS
T ss_pred eeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEeCC
Confidence 5666 5778899999999999 88889999999999988763 2344 2458999999 4455555589
Q ss_pred cEEEEcCCCCCccccccccccCCCCcceeEEEE--ccCCCEEEEEeCCCeEEEEEc
Q 040274 169 FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSF--RPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 169 ~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+|++||+... .......+|. ..|+++.| +|++..|++++.+|. ++|..
T Consensus 246 tIkLWd~~~~-~~~~~~~gh~----~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 246 YVHKIDLKNY-SISSLKTGSL----ENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEEEETTTT-EEEEEECSCC----SCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred eEEEEECCCC-eEEEEEcCCC----ceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 9999996544 3322222454 38999999 999999999999999 88764
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.87 E-value=2.6e-21 Score=195.92 Aligned_cols=150 Identities=13% Similarity=0.144 Sum_probs=134.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.|++++|+|++.+|++|+.||.|++||+.++..+..+.+|.++|++++|+|++.+|++++.||.|++||+.+++.+..+.
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999888774
Q ss_pred ---CCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEcc-CCCEEEEEeCCCeEEEEEc
Q 040274 149 ---GHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP-YEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 149 ---~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~g~~dg~~~i~~~ 222 (359)
+.|++++|+|+| +++++.|+.|.+||+.........+..|.. .|.+++|+| ++.+|++|+.||.+.+|..
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH----FVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS----CEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC----cEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 568999999999 778888999999997655445555555544 799999999 8899999999999988654
No 99
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.6e-21 Score=182.04 Aligned_cols=174 Identities=13% Similarity=0.148 Sum_probs=140.2
Q ss_pred eEEEECCCCCEEEEecc----c--------------------eeEEE----------------EcCCCCEEEEEeCCCeE
Q 040274 52 ILWILPSSGRYMAVAGR----R--------------------TDLMR----------------VNPFNGVVSLGHSGGTV 91 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----~--------------------v~~l~----------------~sp~~~~l~tg~~dg~v 91 (359)
.+++|+|++.+|++|+. . +..+. ++|++.+|++|+.||.|
T Consensus 115 ~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 194 (437)
T 3gre_A 115 TQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRV 194 (437)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeE
Confidence 89999999999999876 1 12222 45678999999999999
Q ss_pred EEEeCCCCcceEEeec--CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec----CCceeEEEcC----CC-
Q 040274 92 TMWKPTTSALLIKMLY--HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT----GHAKTLDFSQ----KG- 160 (359)
Q Consensus 92 ~lwd~~~~~~~~~~~~--h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~----~~v~~~~~s~----~g- 160 (359)
++||+.+++++..+.+ |.+.|++++|+|++.+|++|+.||.|++||+++++++.++. ..|++++|+| ++
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc
Confidence 9999999999999988 89999999999999999999999999999999999988772 3478996655 56
Q ss_pred -cEEEEcCCcEEEEcCCCCCccccccccccC----------------------CCCcceeEEEEccCCCEEEEEeCCCeE
Q 040274 161 -LLAVGTGSFAQILGDFSGSHNYSRYMGNSM----------------------VKGYQIGKVSFRPYEDVLGIGHSMGWS 217 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~----------------------~~~~~v~~~~~sp~~~~l~~g~~dg~~ 217 (359)
+++++.|+.|++||+..+ .....+..|.. .+...|++++|+ ++.+|++|+.||.+
T Consensus 275 ~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp EEEEESTTEEEEEEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred EEEEEcCCCcEEEEEcCCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 677778999999997654 32222222110 133479999999 78999999999999
Q ss_pred EEEEcCCCCC
Q 040274 218 GILVPRSSEP 227 (359)
Q Consensus 218 ~i~~~gs~~~ 227 (359)
.+|....+..
T Consensus 353 ~~wd~~~~~~ 362 (437)
T 3gre_A 353 VMFSLNELSS 362 (437)
T ss_dssp EEEETTCGGG
T ss_pred EEEECCCccc
Confidence 9998766543
No 100
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.87 E-value=4.2e-21 Score=177.91 Aligned_cols=169 Identities=15% Similarity=0.110 Sum_probs=142.4
Q ss_pred eEEEECCC----C---CEEEEecc---------------------------------ceeEEEEc----CCCCE-EEEEe
Q 040274 52 ILWILPSS----G---RYMAVAGR---------------------------------RTDLMRVN----PFNGV-VSLGH 86 (359)
Q Consensus 52 ~~l~~spd----g---~~l~~~~~---------------------------------~v~~l~~s----p~~~~-l~tg~ 86 (359)
.+++|+|+ | ++|++++. .|.+++|+ |++.+ |++|+
T Consensus 66 ~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~ 145 (397)
T 1sq9_A 66 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD 145 (397)
T ss_dssp EEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE
T ss_pred EEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe
Confidence 89999999 9 99998775 27889999 99999 99999
Q ss_pred CCCeEEEEeCCC------CcceE-----Eee-------cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 87 SGGTVTMWKPTT------SALLI-----KML-------YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 87 ~dg~v~lwd~~~------~~~~~-----~~~-------~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.||.|++||+.+ +..+. .+. .|...|++++|+|++ +|++++.|+.|++||+++++++..+.
T Consensus 146 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 146 VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe
Confidence 999999999998 66666 774 489999999999999 99999999999999999998887775
Q ss_pred C---------CceeEEEcCCC--cEEEEcC---CcEEEEcCCCCCcccccccc-------------ccCCCCcceeEEEE
Q 040274 149 G---------HAKTLDFSQKG--LLAVGTG---SFAQILGDFSGSHNYSRYMG-------------NSMVKGYQIGKVSF 201 (359)
Q Consensus 149 ~---------~v~~~~~s~~g--l~~~~~d---~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~ 201 (359)
. .+.+++|+|++ +++++.| +.|++||+... .....+.. |.. .|.+++|
T Consensus 225 ~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~ 299 (397)
T 1sq9_A 225 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSS----WVMSLSF 299 (397)
T ss_dssp CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSS----CEEEEEE
T ss_pred ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCC----cEEEEEE
Confidence 4 48999999999 7777788 99999997654 45555555 543 7999999
Q ss_pred ccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 202 RPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 202 sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
+|++.+|++|+.||.+.+|....+.
T Consensus 300 ~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 300 NDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 9999999999999999999876553
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3e-21 Score=181.63 Aligned_cols=170 Identities=12% Similarity=0.120 Sum_probs=139.2
Q ss_pred eEEEECC-CCCEEEEecc----------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCC---CC
Q 040274 52 ILWILPS-SGRYMAVAGR----------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPT---TS 99 (359)
Q Consensus 52 ~~l~~sp-dg~~l~~~~~----------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~---~~ 99 (359)
.+++|+| +|.+|++|+. .|++++|+|++.+|++|+.||.|++||+. ++
T Consensus 67 ~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 67 TSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp EEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEET
T ss_pred EEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCC
Confidence 9999999 9999999986 68999999999999999999999999994 45
Q ss_pred cceEEeec------------CCCCeEEEE--EecCCCEEEEecCCCeEEEEEcCCCeeeEeec-----CCceeEEEcCCC
Q 040274 100 ALLIKMLY------------HQGPVSALA--FHPNGHLMATTGKECKIKIWDLRKYEVLQTLT-----GHAKTLDFSQKG 160 (359)
Q Consensus 100 ~~~~~~~~------------h~~~v~~l~--~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~v~~~~~s~~g 160 (359)
..+..+.+ +...+.++. ++|++.+|++++.|+.|++||+++++++..+. +.|++++|+|++
T Consensus 147 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 226 (437)
T 3gre_A 147 SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC 226 (437)
T ss_dssp TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS
T ss_pred ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC
Confidence 44433322 455667776 55789999999999999999999999888874 458999999999
Q ss_pred --cEEEEcCCcEEEEcCCCCCccccccc-cccCCCCcceeEEEEcc----CCCEEEEEeCCCeEEEEEcCCCC
Q 040274 161 --LLAVGTGSFAQILGDFSGSHNYSRYM-GNSMVKGYQIGKVSFRP----YEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 161 --l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~v~~~~~sp----~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
+++++.|+.|++||+... .....+. .| ...|.+++|+| ++.+|++|+.||.+.+|....+.
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~----~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFN-VLIRSWSFGD----HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp CEEEEEETTSCEEEEETTTT-EEEEEEBCTT----CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CEEEEEcCCCeEEEEEcCCc-cEEEEEecCC----CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 788889999999997654 4444332 33 23799996665 67899999999999999876554
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.4e-21 Score=192.57 Aligned_cols=171 Identities=14% Similarity=0.152 Sum_probs=141.9
Q ss_pred eEEEECCC--CCEEEEecc-------------------------ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCC--c
Q 040274 52 ILWILPSS--GRYMAVAGR-------------------------RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTS--A 100 (359)
Q Consensus 52 ~~l~~spd--g~~l~~~~~-------------------------~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~--~ 100 (359)
++++|+|+ |++|++|+. .|++++|+|+ +.+|++|+.||.|++||+.++ .
T Consensus 57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~ 136 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 136 (753)
T ss_dssp EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC
T ss_pred EEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc
Confidence 89999988 999999886 7999999998 999999999999999999877 3
Q ss_pred ceEEeecCCCCeEEEEEec-------------CCCEEEEecCCCeEEEEEcCCC----eeeEee---cCCceeEEEcCC-
Q 040274 101 LLIKMLYHQGPVSALAFHP-------------NGHLMATTGKECKIKIWDLRKY----EVLQTL---TGHAKTLDFSQK- 159 (359)
Q Consensus 101 ~~~~~~~h~~~v~~l~~~p-------------~g~~l~s~~~d~~i~vwd~~~~----~~~~~~---~~~v~~~~~s~~- 159 (359)
....+.+|...|++++|+| ++.+|++|+.||.|++||++++ .++..+ .+.|++++|+|+
T Consensus 137 ~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC
Confidence 4456678999999999999 5899999999999999999876 444555 456899999999
Q ss_pred --C--cEEEEcCCcEEEEcCCCCCcccc-ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 160 --G--LLAVGTGSFAQILGDFSGSHNYS-RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 160 --g--l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
| +++++.||.|++||+........ ....... +...|++++|+|+|.+|++|+.||.+.+|...
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~-~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSC-CSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCC-CCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 8 88888999999999766422211 1111111 44479999999999999999999999998754
No 103
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=9.6e-21 Score=179.57 Aligned_cols=176 Identities=15% Similarity=0.170 Sum_probs=143.0
Q ss_pred EECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCC
Q 040274 55 ILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111 (359)
Q Consensus 55 ~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~ 111 (359)
++++++.+|++|+. .|++++|+|++ +|++|+.||+|++||+.++.++..+.+|.+.
T Consensus 127 ~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~ 205 (464)
T 3v7d_B 127 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNST 205 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCc
Confidence 44557889999876 79999999988 9999999999999999999999999999999
Q ss_pred eEEEEEe--cCCCEEEEecCCCeEEEEEcCCCeee-----------------------EeecCCc-eeEEEcCCC--cEE
Q 040274 112 VSALAFH--PNGHLMATTGKECKIKIWDLRKYEVL-----------------------QTLTGHA-KTLDFSQKG--LLA 163 (359)
Q Consensus 112 v~~l~~~--p~g~~l~s~~~d~~i~vwd~~~~~~~-----------------------~~~~~~v-~~~~~s~~g--l~~ 163 (359)
|.+++|+ +++.+|++++.|+.|++||+.++... ..+.++. ...++++++ +++
T Consensus 206 v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 285 (464)
T 3v7d_B 206 VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 285 (464)
T ss_dssp EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEE
T ss_pred cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEE
Confidence 9999998 57889999999999999999876532 2232221 223345666 888
Q ss_pred EEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEE------------------------
Q 040274 164 VGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGI------------------------ 219 (359)
Q Consensus 164 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i------------------------ 219 (359)
++.|+.|++||+... .....+..|.. .|.+++|+|++.+|++|+.||.+.+
T Consensus 286 ~~~d~~i~vwd~~~~-~~~~~~~~~~~----~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 286 GSYDNTLIVWDVAQM-KCLYILSGHTD----RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp EETTSCEEEEETTTT-EEEEEECCCSS----CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EeCCCeEEEEECCCC-cEEEEecCCCC----CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 899999999997554 55555555543 8999999999999999999999887
Q ss_pred ----EEcCCCCCceeeeccCC
Q 040274 220 ----LVPRSSEPNFDSWVANP 236 (359)
Q Consensus 220 ----~~~gs~~~~~~~~~~~~ 236 (359)
+++++.|+.+++|+.+.
T Consensus 361 ~~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 361 SDKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp CSSEEEEEETTSEEEEEETTT
T ss_pred cCCEEEEEeCCCcEEEEECCC
Confidence 45666778888888754
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=1.7e-20 Score=172.24 Aligned_cols=168 Identities=10% Similarity=0.071 Sum_probs=133.7
Q ss_pred eEEEECCCCCEEEEecc--------------------ceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcceEEeecCCC
Q 040274 52 ILWILPSSGRYMAVAGR--------------------RTDLMRVNPFNGVV-SLGHSGGTVTMWKPTTSALLIKMLYHQG 110 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------~v~~l~~sp~~~~l-~tg~~dg~v~lwd~~~~~~~~~~~~h~~ 110 (359)
.+++|+|||++|++|+. .+..+++.++++.+ ++|+.|++|++||+.+++++..+. |..
T Consensus 23 ~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~ 101 (355)
T 3vu4_A 23 TDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDA 101 (355)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSS
T ss_pred EEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCC
Confidence 89999999999999876 46678888887776 567788999999999999888875 667
Q ss_pred CeEEEEEecCC-----------------------------------CEEEE--ecCCCeEEEEEcCCCe-----------
Q 040274 111 PVSALAFHPNG-----------------------------------HLMAT--TGKECKIKIWDLRKYE----------- 142 (359)
Q Consensus 111 ~v~~l~~~p~g-----------------------------------~~l~s--~~~d~~i~vwd~~~~~----------- 142 (359)
.|.++.|+++. .++++ |+.||.|++||+.++.
T Consensus 102 ~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~ 181 (355)
T 3vu4_A 102 PVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ 181 (355)
T ss_dssp CEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-------------
T ss_pred ceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccc
Confidence 89998888753 23444 5778999999998754
Q ss_pred ----e-eEee---cCCceeEEEcCCC--cEEEEcCCc-EEEEcCCCCCccccccc-c-ccCCCCcceeEEEEccCCCEEE
Q 040274 143 ----V-LQTL---TGHAKTLDFSQKG--LLAVGTGSF-AQILGDFSGSHNYSRYM-G-NSMVKGYQIGKVSFRPYEDVLG 209 (359)
Q Consensus 143 ----~-~~~~---~~~v~~~~~s~~g--l~~~~~d~~-i~v~d~~~~~~~~~~~~-~-~~~~~~~~v~~~~~sp~~~~l~ 209 (359)
+ +..+ .+.|++++|+|+| +++++.|++ |+|||+.++ .....+. + |. ..|++++|+|+|.+|+
T Consensus 182 ~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~-~~~~~~~~g~h~----~~v~~~~~s~~~~~l~ 256 (355)
T 3vu4_A 182 KAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG-VLVREFRRGLDR----ADVVDMKWSTDGSKLA 256 (355)
T ss_dssp -----CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC-CEEEEEECTTCC----SCEEEEEECTTSCEEE
T ss_pred cccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCCCC----CcEEEEEECCCCCEEE
Confidence 1 4555 4568999999999 888889998 999997655 4455554 3 53 3899999999999999
Q ss_pred EEeCCCeEEEEEcCCC
Q 040274 210 IGHSMGWSGILVPRSS 225 (359)
Q Consensus 210 ~g~~dg~~~i~~~gs~ 225 (359)
+|+.|+.+.+|.....
T Consensus 257 s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 257 VVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEETTCEEEEEESSCC
T ss_pred EEECCCEEEEEEccCC
Confidence 9999999999986543
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.6e-20 Score=166.45 Aligned_cols=161 Identities=16% Similarity=0.188 Sum_probs=135.3
Q ss_pred eEEEECCCCCEEEEecc---------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcceEEeec-C
Q 040274 52 ILWILPSSGRYMAVAGR---------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALLIKMLY-H 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~-h 108 (359)
.++.| ++.+|++++. .+.++.|+| ++.+|++++.||.|++|| ....+..+.. |
T Consensus 108 ~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~ 183 (313)
T 3odt_A 108 CSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIH 183 (313)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSC
T ss_pred EEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccC
Confidence 66666 6778888775 788999988 899999999999999999 4566777776 9
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSR 184 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~ 184 (359)
...|.+++|+|++. +++++.|+.|++||+++++++..+. +.+++++|+|+| +++++.|+.|++||+... .....
T Consensus 184 ~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~ 261 (313)
T 3odt_A 184 NDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG-SLKQV 261 (313)
T ss_dssp SSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC-CEEEE
T ss_pred cccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCC-ceeEE
Confidence 99999999999998 9999999999999999999888873 568999999999 999999999999997655 45555
Q ss_pred cccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 185 YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 185 ~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+..|.. .|.+++|+|++. +++++.||.+.+|...
T Consensus 262 ~~~~~~----~i~~~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 262 ITLPAI----SIWSVDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp EECSSS----CEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred EeccCc----eEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence 555543 799999999998 5568888877776643
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.86 E-value=1.4e-20 Score=184.02 Aligned_cols=164 Identities=10% Similarity=0.052 Sum_probs=141.0
Q ss_pred eEEEECCCCCEEEEecc---------------------ceeEEEEcCCCCEEEEEeC-CCeEEEEeCCCCcce-EEeecC
Q 040274 52 ILWILPSSGRYMAVAGR---------------------RTDLMRVNPFNGVVSLGHS-GGTVTMWKPTTSALL-IKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------~v~~l~~sp~~~~l~tg~~-dg~v~lwd~~~~~~~-~~~~~h 108 (359)
.+++++|+|.+++++.. .+.+++|+ +.+|++|+. ||.|++||+.++... ..+.+|
T Consensus 410 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 487 (615)
T 1pgu_A 410 KVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPL 487 (615)
T ss_dssp EEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCC
T ss_pred eEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCc
Confidence 57888999988887432 68889998 889999999 999999999987655 667789
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec----CCceeEEEcC----------CC--cEEEEcCCcEEE
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT----GHAKTLDFSQ----------KG--LLAVGTGSFAQI 172 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~----~~v~~~~~s~----------~g--l~~~~~d~~i~v 172 (359)
...|++++|+|++.+|++++.|+.|++||+.+++++..+. ..|++++|+| ++ +++++.|+.|++
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~i 567 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 567 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEE
Confidence 9999999999999999999999999999999999888764 4589999999 88 778888999999
Q ss_pred EcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 173 LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 173 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
||+.........+..|.. .|++++|+|++. |++++.||.+.+|..
T Consensus 568 w~~~~~~~~~~~~~~h~~----~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 568 YSVKRPMKIIKALNAHKD----GVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EESSCTTCCEEETTSSTT----CEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred EECCCCceechhhhcCcc----ceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 998665456666666644 899999999999 999999998777754
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.86 E-value=2.9e-20 Score=169.75 Aligned_cols=110 Identities=16% Similarity=0.281 Sum_probs=98.4
Q ss_pred ceeEEEEcCC---CCEEEEEeCCCeEEEEeCCC-Ccce-EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee
Q 040274 69 RTDLMRVNPF---NGVVSLGHSGGTVTMWKPTT-SALL-IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV 143 (359)
Q Consensus 69 ~v~~l~~sp~---~~~l~tg~~dg~v~lwd~~~-~~~~-~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~ 143 (359)
.|++++|+|+ +.+|++|+.||.|++||+.+ +..+ ..+.+|.+.|++++|+|++.+|++++.||.|++||+.+++.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 120 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA 120 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc
Confidence 8999999998 59999999999999999997 5554 67889999999999999999999999999999999999887
Q ss_pred eEee--cCCceeEEE--cCCC--cEEEEcCCcEEEEcCCCC
Q 040274 144 LQTL--TGHAKTLDF--SQKG--LLAVGTGSFAQILGDFSG 178 (359)
Q Consensus 144 ~~~~--~~~v~~~~~--s~~g--l~~~~~d~~i~v~d~~~~ 178 (359)
+... ...|++++| +|++ +++++.|+.|++||+...
T Consensus 121 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 121 IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 6655 567999999 8888 788889999999997543
No 108
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=1.9e-20 Score=198.17 Aligned_cols=152 Identities=18% Similarity=0.241 Sum_probs=136.5
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.|++++|+|++.+|++|+.||+|++||+.++..+..+.+|.+.|++++|+|+|.+|++++.|+.|++||+.+++++..+.
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999988884
Q ss_pred ---CCceeEEEcCCC----cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 149 ---GHAKTLDFSQKG----LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 149 ---~~v~~~~~s~~g----l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+.|++++|+|++ +++++.|+.|.+||+..+ .....+.+|.. .|++++|+|++.+|++|+.||.+.+|.
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~~h~~----~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMFGHTN----SVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEECCCSS----CEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-chhheecCCCC----CEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 458999999964 667888999999997654 45555566644 899999999999999999999999997
Q ss_pred cCCC
Q 040274 222 PRSS 225 (359)
Q Consensus 222 ~gs~ 225 (359)
..++
T Consensus 772 ~~~~ 775 (1249)
T 3sfz_A 772 VRSA 775 (1249)
T ss_dssp GGGT
T ss_pred CCCC
Confidence 6544
No 109
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.85 E-value=6.9e-20 Score=171.87 Aligned_cols=146 Identities=15% Similarity=0.272 Sum_probs=124.0
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee--cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML--YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.++.|+||+++ +|++|. |++|+|||+.+++.+..+. +|...|++++|+|+|.+|++|+.||.|++||+.+++++..
T Consensus 107 y~~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 57889999864 777775 8999999999998877655 6778899999999999999999999999999999999988
Q ss_pred ecC---CceeEEEcCCCcEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 147 LTG---HAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 147 ~~~---~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
+.+ .+.+++|++..+++++.|+.+.+||..........+..|.. .+..+.|+|++.+|++++.||.+.+|
T Consensus 185 ~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~----~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 185 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ----EVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc----ceeeeeecCCCCeeeeeeccccceEE
Confidence 854 46777776555888999999999997766555566666654 79999999999999999999988774
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.85 E-value=3.3e-20 Score=168.17 Aligned_cols=171 Identities=6% Similarity=-0.006 Sum_probs=140.1
Q ss_pred eEEEECCCCC-EEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC-------
Q 040274 52 ILWILPSSGR-YMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTT------- 98 (359)
Q Consensus 52 ~~l~~spdg~-~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~------- 98 (359)
.+++|+|+|+ +|++|+. .|.+++|+| +.+|++|+.||.|++||+.+
T Consensus 60 ~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 60 LCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp EEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE
T ss_pred EEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc
Confidence 8999999999 8988875 468999999 99999999999999999987
Q ss_pred --CcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC-Ceee-Eee----cCCceeEEEcC-CC--cEEEEcC
Q 040274 99 --SALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK-YEVL-QTL----TGHAKTLDFSQ-KG--LLAVGTG 167 (359)
Q Consensus 99 --~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~-~~~~-~~~----~~~v~~~~~s~-~g--l~~~~~d 167 (359)
++++..+. |...|.+++|+|++ +++++.|+.|++||+++ +... ... ...+.+++|+| ++ +++++.+
T Consensus 139 ~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 139 VKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred ccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC
Confidence 77777765 89999999999987 99999999999999998 5432 111 45689999999 88 8888899
Q ss_pred CcEEEEcCCCC-----CccccccccccC-----CCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 168 SFAQILGDFSG-----SHNYSRYMGNSM-----VKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 168 ~~i~v~d~~~~-----~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
+.|.+|++... ......+..|.. .+...|.+++|+|++.+|++|+.||.+.+|...++.
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 99999997554 244445555421 023379999999999999999999999998876543
No 111
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.85 E-value=1.5e-19 Score=176.83 Aligned_cols=164 Identities=11% Similarity=0.097 Sum_probs=142.0
Q ss_pred eEEEECC--CCCEEEEecc-------------------------------ceeEEEEcCCCCEEEEEeCC----CeEEEE
Q 040274 52 ILWILPS--SGRYMAVAGR-------------------------------RTDLMRVNPFNGVVSLGHSG----GTVTMW 94 (359)
Q Consensus 52 ~~l~~sp--dg~~l~~~~~-------------------------------~v~~l~~sp~~~~l~tg~~d----g~v~lw 94 (359)
.+++|+| ||++|++++. .|.+++|+|++.+|++++.+ +.|.+|
T Consensus 68 ~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~ 147 (615)
T 1pgu_A 68 TTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISW 147 (615)
T ss_dssp EEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEET
T ss_pred EEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEE
Confidence 6899999 9999999875 57889999999999999987 688888
Q ss_pred eCCCCcceEEeecCCCCeEEEEEecCCC-EEEEecCCCeEEEEEcCCCeeeEeec---C---CceeEEEcCC-C--cEEE
Q 040274 95 KPTTSALLIKMLYHQGPVSALAFHPNGH-LMATTGKECKIKIWDLRKYEVLQTLT---G---HAKTLDFSQK-G--LLAV 164 (359)
Q Consensus 95 d~~~~~~~~~~~~h~~~v~~l~~~p~g~-~l~s~~~d~~i~vwd~~~~~~~~~~~---~---~v~~~~~s~~-g--l~~~ 164 (359)
| ++..+..+.+|...|++++|+|++. +|++++.|+.|++||+.+++.+..+. . .|++++|+|+ | ++++
T Consensus 148 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 148 D--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp T--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEE
T ss_pred E--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEE
Confidence 8 5678888999999999999999998 89999999999999999999888873 4 6899999999 8 7778
Q ss_pred EcCCcEEEEcCCCCCcccccc-c---cccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 165 GTGSFAQILGDFSGSHNYSRY-M---GNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 165 ~~d~~i~v~d~~~~~~~~~~~-~---~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+.|+.|++||+... .....+ . .| ...|.+++|+ ++.+|++++.||.+.+|...
T Consensus 226 ~~dg~i~vwd~~~~-~~~~~~~~~~~~~----~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 226 GSDRKISCFDGKSG-EFLKYIEDDQEPV----QGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp ETTCCEEEEETTTC-CEEEECCBTTBCC----CSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred eCCCeEEEEECCCC-CEeEEeccccccc----CCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 88999999997654 444444 3 44 3489999999 99999999999999987654
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.84 E-value=2.9e-20 Score=173.06 Aligned_cols=146 Identities=11% Similarity=0.072 Sum_probs=113.5
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCcce-----EEeecCCCCeEEEEEec--------CCCEEEEecCCCeEEEEEcCC
Q 040274 74 RVNPFNGVVSLGHSGGTVTMWKPTTSALL-----IKMLYHQGPVSALAFHP--------NGHLMATTGKECKIKIWDLRK 140 (359)
Q Consensus 74 ~~sp~~~~l~tg~~dg~v~lwd~~~~~~~-----~~~~~h~~~v~~l~~~p--------~g~~l~s~~~d~~i~vwd~~~ 140 (359)
.+++++.+|++|+.|++|+|||+.++... ..+.+|.+.|++++|+| ++++|++++.|++|+|||+.+
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 33446778999999999999999887543 34568999999999998 789999999999999999988
Q ss_pred CeeeEee---cCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCcccccc---------------------ccccCCCC
Q 040274 141 YEVLQTL---TGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRY---------------------MGNSMVKG 193 (359)
Q Consensus 141 ~~~~~~~---~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~---------------------~~~~~~~~ 193 (359)
+.++..+ ...+.+++|+|++ +++++.|++|++||+.......... ..... +.
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~ 254 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG-IA 254 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C-CS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc-cc
Confidence 7765544 5678999999987 7788899999999976542211100 00011 34
Q ss_pred cceeEEEEc-cCCCEEEEEeCCCeEEEE
Q 040274 194 YQIGKVSFR-PYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 194 ~~v~~~~~s-p~~~~l~~g~~dg~~~i~ 220 (359)
..|.++.|+ |++..|++++.|+.+.+|
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vw 282 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRW 282 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEE
Confidence 468889987 799999999999998875
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.84 E-value=3e-20 Score=173.03 Aligned_cols=167 Identities=11% Similarity=0.062 Sum_probs=121.3
Q ss_pred eEEEECC--------CCCEEEEecc-----------------------ceeEEEEcCCC-CEEEEEeCCCeEEEEeCCCC
Q 040274 52 ILWILPS--------SGRYMAVAGR-----------------------RTDLMRVNPFN-GVVSLGHSGGTVTMWKPTTS 99 (359)
Q Consensus 52 ~~l~~sp--------dg~~l~~~~~-----------------------~v~~l~~sp~~-~~l~tg~~dg~v~lwd~~~~ 99 (359)
.+++|+| ||++|++|+. .|.+++|+|++ .+|++|+.||+|++||+.++
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 8899987 8999999987 78999999977 48999999999999999876
Q ss_pred cceEE-------------------------eecCCCCeEEEEEe-cCCCEEEEecCCCeEEEEEcCCCeeeEeec-----
Q 040274 100 ALLIK-------------------------MLYHQGPVSALAFH-PNGHLMATTGKECKIKIWDLRKYEVLQTLT----- 148 (359)
Q Consensus 100 ~~~~~-------------------------~~~h~~~v~~l~~~-p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~----- 148 (359)
..... ..+|...|.++.|+ |+|..|++++.|+++++||+..+.....+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~ 299 (393)
T 4gq1_A 220 LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK 299 (393)
T ss_dssp C----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------
T ss_pred cccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc
Confidence 54322 23677889999997 799999999999999999998765443331
Q ss_pred ----------------CCceeEEEcCC--C-c-EEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEE
Q 040274 149 ----------------GHAKTLDFSQK--G-L-LAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVL 208 (359)
Q Consensus 149 ----------------~~v~~~~~s~~--g-l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 208 (359)
.....+.|+|. + + ++++.|+.|++||+..+ ........|.. +|.+++|+|||++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~-~~~~~~~~~~~----~V~svafspdG~~L 374 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK-DSNSIPIQLGM----PIVDFCWHQDGSHL 374 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT-TCCEEEEECSS----CEEEEEECTTSSEE
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC-cEEEEecCCCC----cEEEEEEcCCCCEE
Confidence 11223445553 3 3 34556899999997655 44444445533 89999999999999
Q ss_pred EEEeCCCeEEEEEcC
Q 040274 209 GIGHSMGWSGILVPR 223 (359)
Q Consensus 209 ~~g~~dg~~~i~~~g 223 (359)
++++.+|.+.+.+.|
T Consensus 375 A~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 375 AIATEGSVLLTRLMG 389 (393)
T ss_dssp EEEESSEEEEEEEGG
T ss_pred EEEeCCCeEEEEEeC
Confidence 999999876665544
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.84 E-value=1.8e-19 Score=170.73 Aligned_cols=146 Identities=18% Similarity=0.189 Sum_probs=124.1
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CC
Q 040274 74 RVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GH 150 (359)
Q Consensus 74 ~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~ 150 (359)
++++++.+|++|+.||.|++||+.++.++..+.+|...|++++|+|++.+|++++.|+.|++||+.+++++..+. ..
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 354 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc
Confidence 446778899999999999999999999999999999999999999999999999999999999999999998884 45
Q ss_pred ceeEEEcCCCcEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 151 AKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 151 v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
|.+++|++.-+++++.|+.|++||+..... ... .+ +...+..++|+|++.+|++|+ +|.+.+|...++.
T Consensus 355 v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~-~~~--~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 355 VGLLRLSDKFLVSAAADGSIRGWDANDYSR-KFS--YH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp EEEEEECSSEEEEEETTSEEEEEETTTCCE-EEE--EE---CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred EEEEEEcCCEEEEEeCCCcEEEEECCCCce-eee--ec---CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 889999854489999999999999765432 222 12 223678899999999999998 8888888876654
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.84 E-value=2.5e-19 Score=164.48 Aligned_cols=142 Identities=13% Similarity=0.178 Sum_probs=109.9
Q ss_pred EEEE--EeCCCeEEEEeCCCCc---------------c-eEEeecCCCCeEEEEEecCCCEEEEecCCCe-EEEEEcCCC
Q 040274 81 VVSL--GHSGGTVTMWKPTTSA---------------L-LIKMLYHQGPVSALAFHPNGHLMATTGKECK-IKIWDLRKY 141 (359)
Q Consensus 81 ~l~t--g~~dg~v~lwd~~~~~---------------~-~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~-i~vwd~~~~ 141 (359)
++++ |+.||.|++||+.++. + +..+.+|.+.|++++|+|+|.+|++|+.|++ |++||++++
T Consensus 149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC
T ss_pred EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 4444 5789999999998765 2 6788899999999999999999999999998 999999999
Q ss_pred eeeEeec-C----CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccc-ccccc------------------ccCCCCcc
Q 040274 142 EVLQTLT-G----HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNY-SRYMG------------------NSMVKGYQ 195 (359)
Q Consensus 142 ~~~~~~~-~----~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~-~~~~~------------------~~~~~~~~ 195 (359)
+++.++. + .|++++|+|+| +++++.|++|+|||+....... ..+.. ... ....
T Consensus 229 ~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 307 (355)
T 3vu4_A 229 VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD-KHVR 307 (355)
T ss_dssp CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC-TTCC
T ss_pred cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC-CCCC
Confidence 9888874 3 48999999999 7888899999999976542111 01000 000 1113
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 196 IGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 196 v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
...++|+|++.+|++++.||.+.+|...
T Consensus 308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 308 GCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp CCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 4678999999999999999988877543
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=3.5e-19 Score=159.57 Aligned_cols=150 Identities=15% Similarity=0.277 Sum_probs=124.0
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee--cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML--YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
+++|+||+++ +|++| .|++|+|||+.+++++..+. +|...|++++|+|++++|++|+.|++|++||+.+++++..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5789999986 77766 49999999999999887765 67788999999999999999999999999999999999888
Q ss_pred cCC---ceeEEEcCCCcEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 040274 148 TGH---AKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 148 ~~~---v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs 224 (359)
.++ +.++.+.+..+++++.++.+.+|+..........+..|.. .+.++.|++++.+|++++.||.+.+|....
T Consensus 106 ~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ----EVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred cCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC----ceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 554 3444444333788889999999997666555556666644 799999999999999999999999986554
Q ss_pred C
Q 040274 225 S 225 (359)
Q Consensus 225 ~ 225 (359)
+
T Consensus 182 ~ 182 (318)
T 4ggc_A 182 G 182 (318)
T ss_dssp B
T ss_pred C
Confidence 4
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=7.5e-19 Score=165.50 Aligned_cols=143 Identities=13% Similarity=0.239 Sum_probs=117.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce---EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL---IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~---~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~ 145 (359)
.|.+++|++ .+|++|+.||.|++||+.++..+ ..+.+|...|.+++| ++.+|++|+.||.|++||+++++++.
T Consensus 215 ~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 215 AVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR 290 (435)
T ss_dssp CEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred cEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 577777763 48888888888888888877655 566789999999999 67899999999999999999999888
Q ss_pred eec---CCceeEEEcCCCcEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 146 TLT---GHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 146 ~~~---~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
.+. ..+.++.|+++-+++++.|+.|++||+.++ .....+..|.. .|.+++| ++.+|++|+.||.+.+|..
T Consensus 291 ~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~----~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 291 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEE----LVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp EEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC-CEEEEECCCSS----CEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred EEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcC----cEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 884 457888886444889999999999997654 55556666644 7999998 7899999999999988754
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.82 E-value=7.2e-19 Score=165.62 Aligned_cols=158 Identities=18% Similarity=0.266 Sum_probs=130.7
Q ss_pred EEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC
Q 040274 53 LWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109 (359)
Q Consensus 53 ~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~ 109 (359)
..+++++|++|++|+. .|.+++| ++.+|++|+.||+|++||+.+++.+..+.+|.
T Consensus 136 v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~ 213 (435)
T 1p22_A 136 VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHC 213 (435)
T ss_dssp EEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCC
T ss_pred EEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCC
Confidence 3455669999999876 6888888 78899999999999999999999999999999
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeee---Eee---cCCceeEEEcCCCcEEEEcCCcEEEEcCCCCCcccc
Q 040274 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL---QTL---TGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYS 183 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~---~~~---~~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~ 183 (359)
..|.+++|++ .++++|+.||.|++||+.++..+ ..+ .+.|.+++|+.+-+++++.|+.|++||+.+. ....
T Consensus 214 ~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~ 290 (435)
T 1p22_A 214 EAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTC-EFVR 290 (435)
T ss_dssp SCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTC-CEEE
T ss_pred CcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcC-cEEE
Confidence 9999999974 59999999999999999987654 333 3468889984333888999999999997654 5555
Q ss_pred ccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 184 RYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 184 ~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
.+..|.. .|.++.| ++.+|++|+.||.+.+|.
T Consensus 291 ~~~~~~~----~v~~~~~--~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 291 TLNGHKR----GIACLQY--RDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp EEECCSS----CEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred EEcCCCC----cEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 6666643 7999988 578999999999988843
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.82 E-value=8.2e-19 Score=165.60 Aligned_cols=155 Identities=10% Similarity=0.229 Sum_probs=131.4
Q ss_pred EECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCC
Q 040274 55 ILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP 111 (359)
Q Consensus 55 ~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~ 111 (359)
+++++|++|++|+. .|.+++|+ +.+|++|+.||+|++||+.+++.+..+.+|...
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~ 201 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 201 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc
Confidence 56678999999876 78899997 569999999999999999999999999999999
Q ss_pred eEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCCcEEEEcCCcEEEEcCCCCCccccccccc
Q 040274 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGN 188 (359)
Q Consensus 112 v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~~~~~~ 188 (359)
|.++.|+ +.++++++.||.|++||+.+++++..+. ..+.+++|+..-+++++.|+.|++||+... .....+..|
T Consensus 202 v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~ 278 (445)
T 2ovr_B 202 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 278 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGT-EEEEEECCC
T ss_pred EEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCC-cEeEEecCC
Confidence 9999996 5689999999999999999999888774 457889884333888999999999996554 455555555
Q ss_pred cCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 189 SMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 189 ~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
.. .|.++.| ++.+|++|+.||.+.+|
T Consensus 279 ~~----~v~~~~~--~~~~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 279 TN----RVYSLQF--DGIHVVSGSLDTSIRVW 304 (445)
T ss_dssp SS----CEEEEEE--CSSEEEEEETTSCEEEE
T ss_pred CC----ceEEEEE--CCCEEEEEeCCCeEEEE
Confidence 43 7999998 88999999999998874
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.82 E-value=4.3e-18 Score=157.45 Aligned_cols=162 Identities=10% Similarity=0.126 Sum_probs=128.4
Q ss_pred eEEEECCCCCEEE-Eecc----------------------ceeEEEEcCCCCEEEE-EeCCCeEEEEeCCCCcceEEeec
Q 040274 52 ILWILPSSGRYMA-VAGR----------------------RTDLMRVNPFNGVVSL-GHSGGTVTMWKPTTSALLIKMLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~-~~~~----------------------~v~~l~~sp~~~~l~t-g~~dg~v~lwd~~~~~~~~~~~~ 107 (359)
.+++|+|+|++|+ +++. .+.+++|+|++.+|++ ++.++.|++||+.+++.+..+..
T Consensus 35 ~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC
Confidence 7999999999885 4433 6889999999997755 55679999999999988877765
Q ss_pred CCCCeEEEEEecCCCEE-EEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--c-EEEEcCCcEEEEcCCCCCcc
Q 040274 108 HQGPVSALAFHPNGHLM-ATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--L-LAVGTGSFAQILGDFSGSHN 181 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l-~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~~~~~~ 181 (359)
| ..+.+++|+|++.+| ++++.|+.|++||+.+++.+..+ ...+.+++|+|+| + ++++.++.|.+||+... ..
T Consensus 115 ~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~ 192 (391)
T 1l0q_A 115 G-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SV 192 (391)
T ss_dssp S-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EE
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eE
Confidence 4 568999999999977 78888999999999999988777 3457899999999 4 45556799999997554 33
Q ss_pred ccccccccCCCCcceeEEEEccCCCEEEEEe---CCCeEEEE
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH---SMGWSGIL 220 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~---~dg~~~i~ 220 (359)
...+..+ ..+.+++|+|++.+|++++ .++.+.+|
T Consensus 193 ~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 193 IDTVKVE-----AAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EEEEECS-----SEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred EEEEecC-----CCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 3333222 2689999999999988887 56766653
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.82 E-value=2.9e-18 Score=158.59 Aligned_cols=167 Identities=10% Similarity=0.078 Sum_probs=136.2
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcceEEeec
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVV-SLGHSGGTVTMWKPTTSALLIKMLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l-~tg~~dg~v~lwd~~~~~~~~~~~~ 107 (359)
.+++|+|+|++|++++. .+.+++|+|++..| ++++.|+.|++||+.+++.+..+..
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec
Confidence 78999999998876543 67899999999977 6788899999999999988888776
Q ss_pred CCCCeEEEEEecCCCEE-EEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--cEEEE---cCCcEEEEcCCCCC
Q 040274 108 HQGPVSALAFHPNGHLM-ATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAVG---TGSFAQILGDFSGS 179 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l-~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~~---~d~~i~v~d~~~~~ 179 (359)
| ..+.+++|+|++.+| ++++.|+.|++||+++++.+..+ ...+.+++|+|+| +++++ .++.|.+||+...
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~- 234 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN- 234 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-
Confidence 5 456999999999887 67788999999999999887777 4457899999999 55555 5799999997554
Q ss_pred ccccccccccCCCCcceeEEEEccCCCEE-EEEeCCCeEEEEEcCCC
Q 040274 180 HNYSRYMGNSMVKGYQIGKVSFRPYEDVL-GIGHSMGWSGILVPRSS 225 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~g~~dg~~~i~~~gs~ 225 (359)
.....+..+. .+.+++|+|++++| ++++.++.+.+|...++
T Consensus 235 ~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 235 KITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred eEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 4444444442 57899999999987 56688999999887654
No 122
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.81 E-value=4e-19 Score=181.97 Aligned_cols=148 Identities=11% Similarity=0.086 Sum_probs=124.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee-
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL- 147 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~- 147 (359)
.|++++|+|++.+|++|+.||+|+||+..+......+ .|...|++++|+| |.+|++++.|++|++||+.+++++..+
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~ 96 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF 96 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc
Confidence 7999999999999999999999999999877665544 5788999999999 889999999999999999999888777
Q ss_pred -cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccc----------cccccccCCCCcceeEEEEccC-CCEEEEEeC
Q 040274 148 -TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNY----------SRYMGNSMVKGYQIGKVSFRPY-EDVLGIGHS 213 (359)
Q Consensus 148 -~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~----------~~~~~~~~~~~~~v~~~~~sp~-~~~l~~g~~ 213 (359)
.+.|++++|+|++ +++++.||.|++||+....... ..... |...|++++|+|+ +..|++|+.
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~----h~~~V~sl~~sp~~~~~l~~g~~ 172 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAA----RLSPIVSIQWNPRDIGTVLISYE 172 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSS----CCCCCCEEEEETTEEEEEEEECS
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccccc----CCCCeEEEEEccCCCCEEEEEeC
Confidence 5679999999999 7788899999999976542110 11122 3448999999996 578999999
Q ss_pred CCeEEEEEcC
Q 040274 214 MGWSGILVPR 223 (359)
Q Consensus 214 dg~~~i~~~g 223 (359)
||.+ +|...
T Consensus 173 dg~v-lWd~~ 181 (902)
T 2oaj_A 173 YVTL-TYSLV 181 (902)
T ss_dssp SCEE-EEETT
T ss_pred CCcE-EEECC
Confidence 9999 98653
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=1.9e-18 Score=154.84 Aligned_cols=167 Identities=12% Similarity=0.049 Sum_probs=121.7
Q ss_pred eEEEECCC----CCEEEEeccceeEEEEcCCCCEEEEEe--CCCeEEEEeCC-CCcceEEeecCCCCeEEEEEec---CC
Q 040274 52 ILWILPSS----GRYMAVAGRRTDLMRVNPFNGVVSLGH--SGGTVTMWKPT-TSALLIKMLYHQGPVSALAFHP---NG 121 (359)
Q Consensus 52 ~~l~~spd----g~~l~~~~~~v~~l~~sp~~~~l~tg~--~dg~v~lwd~~-~~~~~~~~~~h~~~v~~l~~~p---~g 121 (359)
.+|+++|| +.++++++..+....+ ++++++.+++ .|+.|++|++. +++.+..+.+|...++.++|+| ++
T Consensus 115 ~sla~spd~~~~~~~l~s~g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~ 193 (356)
T 2w18_A 115 RALFCSSDDESEKQVLLKSGNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ 193 (356)
T ss_dssp EEECC------CCEEEEEEEEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETST
T ss_pred EEEEECCCccccccEEEeCCCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCC
Confidence 78888899 8899988763333333 5565666544 59999999994 5888888889999999999999 77
Q ss_pred CEEEEecCCCeEEEEEcCCCeeeEeecC------CceeEEEcCCC-cE-------------EEEcCCcEEEEcCCCCCcc
Q 040274 122 HLMATTGKECKIKIWDLRKYEVLQTLTG------HAKTLDFSQKG-LL-------------AVGTGSFAQILGDFSGSHN 181 (359)
Q Consensus 122 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~------~v~~~~~s~~g-l~-------------~~~~d~~i~v~d~~~~~~~ 181 (359)
.+|++++.|++|+|||+.++++++++.+ .+.+++|+|+| ++ +++.|++|++||..++ ..
T Consensus 194 ~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg-k~ 272 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT-LS 272 (356)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT-EE
T ss_pred ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC-EE
Confidence 9999999999999999999999999853 25677899999 32 3567889999996554 33
Q ss_pred cccc-----ccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 182 YSRY-----MGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 182 ~~~~-----~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
...+ .+|. ..+.+..+ ++.++++|+.|+.++||...++.
T Consensus 273 l~v~~~~~p~Gh~----~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk 316 (356)
T 2w18_A 273 VGVMLYCLPPGQA----GRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ 316 (356)
T ss_dssp EEEEEECCCTTCC----CCEEEEEE--ETTEEEEEETTSCEEEEETTTCS
T ss_pred EEEEEeeccCCCc----ceeEcccc--CCCEEEEEcCCCcEEEEECCCCc
Confidence 3222 1332 13444444 48889999999999998776654
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=6.1e-19 Score=166.28 Aligned_cols=158 Identities=11% Similarity=-0.004 Sum_probs=124.2
Q ss_pred eEEEECCCCCEEEEecc-------------------------------------ceeEEEEcCCCCEEE----EEeCCCe
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------------------RTDLMRVNPFNGVVS----LGHSGGT 90 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------------------~v~~l~~sp~~~~l~----tg~~dg~ 90 (359)
..+++++++.+|++++. .|++++|+|++.+|+ +|+.|+.
T Consensus 40 n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~ 119 (434)
T 2oit_A 40 SLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSI 119 (434)
T ss_dssp BCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEE
T ss_pred cEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCce
Confidence 67888888888887763 289999999999999 7888999
Q ss_pred EEEEeCCCC--------cc---eEEeecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEE
Q 040274 91 VTMWKPTTS--------AL---LIKMLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLD 155 (359)
Q Consensus 91 v~lwd~~~~--------~~---~~~~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~ 155 (359)
|+|||+.++ ++ +..+.+|...|++++|+|+ +.+|++++.||+|++||++++..+... ...+++++
T Consensus 120 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~ 199 (434)
T 2oit_A 120 IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVC 199 (434)
T ss_dssp EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEE
T ss_pred EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEE
Confidence 999998754 22 3445679999999999997 889999999999999999998765544 34689999
Q ss_pred EcCCC--cEEEEcCCcEEEEcCCCCCccccccccccC---CCCcceeEEEEccCCCEEEEE
Q 040274 156 FSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSM---VKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 156 ~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~g 211 (359)
|+|+| +++++.|+.|++||+. . .....+..+.. .+...|.+++|++++.++++.
T Consensus 200 wspdg~~lasgs~dg~v~iwd~~-~-~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 200 WSPKGKQLAVGKQNGTVVQYLPT-L-QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp ECTTSSCEEEEETTSCEEEECTT-C-CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEEccC-C-cccccccCCcccCCCCceeEEEEEEecCceEEEEE
Confidence 99999 7888899999999975 2 22222222211 022379999999998887543
No 125
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.81 E-value=3e-18 Score=161.72 Aligned_cols=158 Identities=16% Similarity=0.230 Sum_probs=128.8
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH 108 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h 108 (359)
.++.+ +|.+|++|+. .|.++.| ++.++++|+.||.|++||+.+++++..+.+|
T Consensus 243 ~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 243 RCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp EEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 55555 7788888765 6888888 7889999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec------CCceeEEEcCCCcEEEEcCCcEEEEcCCCCCccc
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT------GHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNY 182 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~------~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~ 182 (359)
...+.++.++ +.+|++++.||.|++||+++++++..+. +.|++++|+++-+++++.||.|++||+.++ ...
T Consensus 319 ~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~ 395 (445)
T 2ovr_B 319 QSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG-EFI 395 (445)
T ss_dssp CSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTC-CEE
T ss_pred cccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCC-cee
Confidence 9999988874 5699999999999999999999888874 347899997544889999999999997665 344
Q ss_pred ccccc-ccCCCCcceeEEEEccCCCEEEEEeCCCe
Q 040274 183 SRYMG-NSMVKGYQIGKVSFRPYEDVLGIGHSMGW 216 (359)
Q Consensus 183 ~~~~~-~~~~~~~~v~~~~~sp~~~~l~~g~~dg~ 216 (359)
..+.. ....+...|++++|+|++.+|++|+.||.
T Consensus 396 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 396 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred eeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 33311 10113458999999999999999999985
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.79 E-value=1.2e-17 Score=156.56 Aligned_cols=156 Identities=10% Similarity=0.079 Sum_probs=127.1
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEE-EEeCCCeEEEEeCCCCcceEEeec
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVS-LGHSGGTVTMWKPTTSALLIKMLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~-tg~~dg~v~lwd~~~~~~~~~~~~ 107 (359)
.+++|+|+|+++++++. .+.+++|+|++..++ +++.|+.|.+||+.+++.+..+..
T Consensus 173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 252 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK 252 (433)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC
T ss_pred eEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC
Confidence 77899999999998865 688999999998875 455799999999999988777765
Q ss_pred CCCCeEEEEEecCCCEEEEec--------CCCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--c-EEEEcCCcEEEEc
Q 040274 108 HQGPVSALAFHPNGHLMATTG--------KECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--L-LAVGTGSFAQILG 174 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~--------~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l-~~~~~d~~i~v~d 174 (359)
+ ..+.+++|+|+|.+|++++ .|+.|++||+.+++.+..+ .+.+.+++|+|+| + ++++.++.|.+||
T Consensus 253 ~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d 331 (433)
T 3bws_A 253 I-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYD 331 (433)
T ss_dssp C-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred C-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEE
Confidence 4 4589999999999999888 5889999999999887766 5678899999999 3 4456789999999
Q ss_pred CCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 175 DFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
+... .....+. + ...+.+++|+|+|.+|++++.+
T Consensus 332 ~~~~-~~~~~~~-~----~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 332 LKEK-KVQKSIP-V----FDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp TTTT-EEEEEEE-C----SSSEEEEEECTTSSEEEEEECC
T ss_pred CCCC-cEEEEec-C----CCCCCeEEEcCCCCEEEEEecC
Confidence 7543 3333332 2 2368999999999999888763
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.78 E-value=1.2e-17 Score=156.63 Aligned_cols=168 Identities=11% Similarity=0.013 Sum_probs=135.9
Q ss_pred eEEEECCCCCEEEEecc----------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR----------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
.+++|+|++.++++++. .|.+++|+|++.++++++.|+.|++||+.+++.+.
T Consensus 126 ~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 126 KSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp CCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE
T ss_pred eEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE
Confidence 68899997777777654 57889999999999999999999999999999999
Q ss_pred EeecCCCCeEEEEEecCCCEEE-EecCCCeEEEEEcCCCeeeEeec--CCceeEEEcCCC--cEEEE--------cCCcE
Q 040274 104 KMLYHQGPVSALAFHPNGHLMA-TTGKECKIKIWDLRKYEVLQTLT--GHAKTLDFSQKG--LLAVG--------TGSFA 170 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~-s~~~d~~i~vwd~~~~~~~~~~~--~~v~~~~~s~~g--l~~~~--------~d~~i 170 (359)
.+..|...+.+++|+|++.+++ +++.|+.|++||+++++.+..+. +.+.+++|+|+| +++++ .|+.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 9989999999999999999875 55589999999999998887773 458999999999 55555 37899
Q ss_pred EEEcCCCCCccccccccccCCCCcceeEEEEccCCCEE-EEEeCCCeEEEEEcCCC
Q 040274 171 QILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVL-GIGHSMGWSGILVPRSS 225 (359)
Q Consensus 171 ~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~g~~dg~~~i~~~gs~ 225 (359)
.+||+... .....+ .+.. .+.+++|+|+++.| ++++.++.+.+|...++
T Consensus 286 ~~~d~~~~-~~~~~~-~~~~----~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 286 GIYSMDKE-KLIDTI-GPPG----NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEETTTT-EEEEEE-EEEE----CEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEECCCC-cEEeec-cCCC----CcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 99997654 333332 2322 68899999999755 56688888888876543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.76 E-value=5.9e-17 Score=151.84 Aligned_cols=156 Identities=10% Similarity=0.064 Sum_probs=121.1
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEE-EEeCCC--eEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVS-LGHSGG--TVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~-tg~~dg--~v~lwd~~~~~~~~ 103 (359)
.+++|||||++|++++. .+.+++|+|+|..|+ +++.++ .|++||+.++.. .
T Consensus 182 ~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~ 260 (415)
T 2hqs_A 182 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-R 260 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-E
T ss_pred eeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-E
Confidence 88999999999998763 678999999999877 666665 499999998765 5
Q ss_pred EeecCCCCeEEEEEecCCCEEEEecC-CC--eEEEEEcCCCeeeEee--cCCceeEEEcCCC--cEEEEcC---CcEEEE
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATTGK-EC--KIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAVGTG---SFAQIL 173 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~~~-d~--~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~~~d---~~i~v~ 173 (359)
.+..|...+.+++|+|||++|++++. ++ .|++||+.+++..... ...+.+++|+|+| +++++.+ ..|.+|
T Consensus 261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 67788899999999999999888776 44 6888899887643322 3457889999999 5555543 589999
Q ss_pred cCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 174 GDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 174 d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
|+..+ .. ..+..+ . .+.+++|+|+|++|++++.++
T Consensus 341 d~~~~-~~-~~l~~~----~-~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 341 DLATG-GV-QVLSST----F-LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp ETTTC-CE-EECCCS----S-SCEEEEECTTSSEEEEEEEET
T ss_pred ECCCC-CE-EEecCC----C-CcCCeEEcCCCCEEEEEEcCC
Confidence 97654 22 233333 1 689999999999999888765
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.72 E-value=4.6e-16 Score=146.61 Aligned_cols=181 Identities=11% Similarity=0.083 Sum_probs=126.8
Q ss_pred eEEEECCCCCEEE----Eecc----------------------------------ceeEEEEcCC-CCEEEEEeCCCeEE
Q 040274 52 ILWILPSSGRYMA----VAGR----------------------------------RTDLMRVNPF-NGVVSLGHSGGTVT 92 (359)
Q Consensus 52 ~~l~~spdg~~l~----~~~~----------------------------------~v~~l~~sp~-~~~l~tg~~dg~v~ 92 (359)
.+++|+|+|++|+ +|+. .|.+++|+|+ +.+|++|+.||+|+
T Consensus 96 ~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~ 175 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIA 175 (434)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEE
Confidence 8999999999999 4332 5889999997 78999999999999
Q ss_pred EEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec----------CCceeEEEcCCC-c
Q 040274 93 MWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT----------GHAKTLDFSQKG-L 161 (359)
Q Consensus 93 lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~----------~~v~~~~~s~~g-l 161 (359)
+||+.++..+....+|...|++++|+|+|.+|++|+.||.|++||++ +.....+. ..+.+++|++++ +
T Consensus 176 iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 176 VLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99999987776777899999999999999999999999999999998 55444441 157899999998 4
Q ss_pred EE--EEcCC------cEEEEcCCCCCcc-ccccccccC------CCCcceeEEEEccCCCEEEEEeCC-CeEEEEEcCCC
Q 040274 162 LA--VGTGS------FAQILGDFSGSHN-YSRYMGNSM------VKGYQIGKVSFRPYEDVLGIGHSM-GWSGILVPRSS 225 (359)
Q Consensus 162 ~~--~~~d~------~i~v~d~~~~~~~-~~~~~~~~~------~~~~~v~~~~~sp~~~~l~~g~~d-g~~~i~~~gs~ 225 (359)
++ .+.+| .+.+|++...... ...+..+.. ....+...+.+.++.+++++++.. +-+.++.....
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~~ 334 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSD 334 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECTT
T ss_pred EEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecCC
Confidence 32 22332 3889997654211 111111100 011122334455788887776664 44667664433
Q ss_pred CCceeeec
Q 040274 226 EPNFDSWV 233 (359)
Q Consensus 226 ~~~~~~~~ 233 (359)
.+...+|.
T Consensus 335 ~~~~~~~~ 342 (434)
T 2oit_A 335 QINWESWL 342 (434)
T ss_dssp SSCEEEEE
T ss_pred CCccEEEe
Confidence 33344443
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.70 E-value=1.6e-15 Score=142.03 Aligned_cols=148 Identities=12% Similarity=0.024 Sum_probs=111.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCC---eEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEE-EecCCC--eEEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGG---TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMA-TTGKEC--KIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg---~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~-s~~~d~--~i~vwd~~~~~ 142 (359)
.+.+++|+|+|+.|++++.++ .|++||+.+++.. .+..|.+.+.+++|+|||++|+ +++.|+ .|++||+.+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 799999999999999999875 9999999988765 5667888999999999999887 666655 49999999877
Q ss_pred eeEee--cCCceeEEEcCCC--cEEEEc-CC--cEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC-
Q 040274 143 VLQTL--TGHAKTLDFSQKG--LLAVGT-GS--FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM- 214 (359)
Q Consensus 143 ~~~~~--~~~v~~~~~s~~g--l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d- 214 (359)
..... ...+.+++|+|+| +++++. ++ .|.+||+..+ . ...+..+ +..+.+++|+|+|++|++++.+
T Consensus 259 ~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~-~-~~~l~~~----~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 259 IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG-A-PQRITWE----GSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-C-CEECCCS----SSEEEEEEECTTSSEEEEEEECS
T ss_pred EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC-C-EEEEecC----CCcccCeEECCCCCEEEEEECcC
Confidence 63322 4457899999999 555554 34 6777886544 2 2222223 2378899999999999988765
Q ss_pred --CeEEEEEcC
Q 040274 215 --GWSGILVPR 223 (359)
Q Consensus 215 --g~~~i~~~g 223 (359)
+.+.+|...
T Consensus 333 g~~~i~~~d~~ 343 (415)
T 2hqs_A 333 GQQHIAKQDLA 343 (415)
T ss_dssp SCEEEEEEETT
T ss_pred CceEEEEEECC
Confidence 344455443
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=1.6e-15 Score=133.68 Aligned_cols=156 Identities=13% Similarity=0.106 Sum_probs=114.4
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEEEEcCCCCEEEEEeC--CCe--EEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLMRVNPFNGVVSLGHS--GGT--VTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l~~sp~~~~l~tg~~--dg~--v~lwd~~~~~~~~ 103 (359)
.+++|+|||++|++++. .+.+++|+|++.+|++++. ++. |.+|++.++. ..
T Consensus 45 ~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~ 123 (297)
T 2ojh_A 45 EAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PR 123 (297)
T ss_dssp EEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CE
T ss_pred EeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eE
Confidence 89999999999998755 4678999999999999983 344 4455555554 33
Q ss_pred EeecCCCCeEEEEEecCCCEEE-EecCCCeEEEEEcC--CCeeeEee---cCCceeEEEcCCC--cEEEE-cCCcEEEEc
Q 040274 104 KMLYHQGPVSALAFHPNGHLMA-TTGKECKIKIWDLR--KYEVLQTL---TGHAKTLDFSQKG--LLAVG-TGSFAQILG 174 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~-s~~~d~~i~vwd~~--~~~~~~~~---~~~v~~~~~s~~g--l~~~~-~d~~i~v~d 174 (359)
.+.. ...+.+++|+|++++|+ +++.|+.+.+|+++ ++.. ..+ ...+.+++|+|+| +++++ .++.+.||+
T Consensus 124 ~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 124 LMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWR 201 (297)
T ss_dssp ECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred Eeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCccccceECCCCCEEEEEecCCCCccEEE
Confidence 4433 34589999999999877 77789999999864 3333 333 4568999999999 44444 478899998
Q ss_pred CCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 175 DFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
+.........+..+. ..+.++.|+|+|++|++++.+
T Consensus 202 ~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 202 VRVDGSSVERITDSA----YGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EETTSSCEEECCCCS----EEEEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCCcEEEecCC----cccCCeEECCCCCEEEEEEcC
Confidence 653333444444443 378999999999999988876
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=7.1e-15 Score=133.49 Aligned_cols=173 Identities=12% Similarity=0.024 Sum_probs=131.5
Q ss_pred eEEEECCCCCEEEEec--------c---------------------ceeEEEEcCCCCEEEE-EeCCCeEEEEeCCCCcc
Q 040274 52 ILWILPSSGRYMAVAG--------R---------------------RTDLMRVNPFNGVVSL-GHSGGTVTMWKPTTSAL 101 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~--------~---------------------~v~~l~~sp~~~~l~t-g~~dg~v~lwd~~~~~~ 101 (359)
+.++|+|+|++|++++ . .+.+++|+|+++++++ +..++.|.+||+.+++.
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV 123 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee
Confidence 8899999999888766 2 5678999999986554 45579999999999988
Q ss_pred eEEeecCCCC---------eEEEEEecCCCEEEEec--CCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC--cEEEE
Q 040274 102 LIKMLYHQGP---------VSALAFHPNGHLMATTG--KECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG--LLAVG 165 (359)
Q Consensus 102 ~~~~~~h~~~---------v~~l~~~p~g~~l~s~~--~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g--l~~~~ 165 (359)
+..+..+... +.+++|+|+|+++++++ .++.|.+||+.+++.+..+. ..+.+++|+|+| +++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEEC
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEc
Confidence 8877755432 68899999999877765 47899999999999888774 237899999999 66777
Q ss_pred cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC-CeEEEEEcCCC
Q 040274 166 TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM-GWSGILVPRSS 225 (359)
Q Consensus 166 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d-g~~~i~~~gs~ 225 (359)
.++.|.+||+.+. .....+......+...+.+++|+|+|++|++++.+ +.+.+|...++
T Consensus 204 ~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 204 ADGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp TTSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred CCCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 7899999996554 33333322111023357889999999987776654 77777766444
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.67 E-value=3.3e-15 Score=144.62 Aligned_cols=165 Identities=6% Similarity=-0.022 Sum_probs=126.2
Q ss_pred EEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeC--CCCcceEEeecCC
Q 040274 54 WILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKP--TTSALLIKMLYHQ 109 (359)
Q Consensus 54 l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~--~~~~~~~~~~~h~ 109 (359)
..++|+|.++++++. .+++++|+|++++|++++.|++|.+||+ .+++++..+.. .
T Consensus 143 ~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp SCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred cccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 346777777766554 5789999999999999999999999999 78888888764 4
Q ss_pred CCeEEEEEec----CCCEEEEec-CCCeEEEEEcCCCeeeEeecC--------------CceeEEEcCCC---cEEEEcC
Q 040274 110 GPVSALAFHP----NGHLMATTG-KECKIKIWDLRKYEVLQTLTG--------------HAKTLDFSQKG---LLAVGTG 167 (359)
Q Consensus 110 ~~v~~l~~~p----~g~~l~s~~-~d~~i~vwd~~~~~~~~~~~~--------------~v~~~~~s~~g---l~~~~~d 167 (359)
..+.+++|+| +|++|++++ .+++|.+||..+++++..+.. .+.++.++|++ +++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 5679999999 999999888 489999999999998877732 46789999987 4555567
Q ss_pred CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CCCeEEEEEcC
Q 040274 168 SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMGWSGILVPR 223 (359)
Q Consensus 168 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg~~~i~~~g 223 (359)
+.|.+||.............+ +..+.++.|+|+|++|++++ .++.+.+|...
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~----~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGA----APFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEEC----CSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred CeEEEEEecCCCcceeEEecc----CcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 999999975542221111112 23578899999999876554 47777775443
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.66 E-value=3e-15 Score=150.11 Aligned_cols=138 Identities=8% Similarity=0.080 Sum_probs=104.8
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--ceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA--LLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~--~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
|.+++|||||++|++++. +.|++||+.++. .+..+..|...+.+++|+|||++|++++ ++.|++||+.+++.....
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec
Confidence 678999999999999986 999999999873 4556677888999999999999999887 468999999988765544
Q ss_pred cCC-------------------ceeEEEcCCC--cEEEEcCC---------------------------------cEEEE
Q 040274 148 TGH-------------------AKTLDFSQKG--LLAVGTGS---------------------------------FAQIL 173 (359)
Q Consensus 148 ~~~-------------------v~~~~~s~~g--l~~~~~d~---------------------------------~i~v~ 173 (359)
... +.+++||||| +++++.++ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 211 4789999999 55665554 78889
Q ss_pred cCCC-CCccccccccccCCCCcceeEEEEccCCCEEEEEeC
Q 040274 174 GDFS-GSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 174 d~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
|+.. + ......... . +...+.+++| |||++|++++.
T Consensus 269 d~~~~~-~~~~~~~~~-~-~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 269 SPAEQA-QTQWIDLGK-E-QDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp CSSTTC-CCEEECCCS-C-SSEEEEEEEE-EETTEEEEEEE
T ss_pred ECCCCC-ceEEecCCC-C-cceEEEEEEe-CCCCEEEEEEe
Confidence 9655 4 322222110 1 2347999999 99999987654
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=9.6e-15 Score=131.84 Aligned_cols=169 Identities=14% Similarity=0.174 Sum_probs=118.0
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCC-CcceE
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTT-SALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~-~~~~~ 103 (359)
.+++|+|+|++|++++. .+.+++|+|++.+|++++ .++.|.+||+.+ +....
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 78999999998866543 577899999999888877 899999999987 54332
Q ss_pred ----Eeec-CCCCeEEEEEecCCCEEEEe-cCCCeEEEEEcCC--Cee--eEee---cC------CceeEEEcCCC--cE
Q 040274 104 ----KMLY-HQGPVSALAFHPNGHLMATT-GKECKIKIWDLRK--YEV--LQTL---TG------HAKTLDFSQKG--LL 162 (359)
Q Consensus 104 ----~~~~-h~~~v~~l~~~p~g~~l~s~-~~d~~i~vwd~~~--~~~--~~~~---~~------~v~~~~~s~~g--l~ 162 (359)
.+.. ....+.+++|+|+|.+++++ ..++.|.+||+.. +.. +..+ .. .+.+++|+|+| ++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 2232 34578899999999976554 5889999999954 332 2222 11 24579999999 44
Q ss_pred EEE-cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CCCeEEEEEc
Q 040274 163 AVG-TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMGWSGILVP 222 (359)
Q Consensus 163 ~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg~~~i~~~ 222 (359)
+++ .++.|.+||+.........+..... .. .+.+++|+|+|++|++++ .++.+.+|..
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPT-ET-QPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEEC-SS-SCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecC-CC-ccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 333 6799999997532111222211111 12 488999999999888887 5787777744
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=1.1e-14 Score=131.33 Aligned_cols=171 Identities=9% Similarity=0.070 Sum_probs=120.2
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeC-CCeEEEEeCC---CCc
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHS-GGTVTMWKPT---TSA 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~-dg~v~lwd~~---~~~ 100 (359)
.+++|+|+|++|++++. .+.+++|+|++.+|++++. ++.|.+||+. +..
T Consensus 41 ~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 120 (343)
T 1ri6_A 41 QPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG 120 (343)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE
T ss_pred ceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccc
Confidence 78999999998877654 4678899999998876664 8899999994 334
Q ss_pred ceEEeecCCCCeEEEEEecCCCEEEEec-CCCeEEEEEcCC-CeeeE----ee----cCCceeEEEcCCC--cEEEE-cC
Q 040274 101 LLIKMLYHQGPVSALAFHPNGHLMATTG-KECKIKIWDLRK-YEVLQ----TL----TGHAKTLDFSQKG--LLAVG-TG 167 (359)
Q Consensus 101 ~~~~~~~h~~~v~~l~~~p~g~~l~s~~-~d~~i~vwd~~~-~~~~~----~~----~~~v~~~~~s~~g--l~~~~-~d 167 (359)
.+..+.. ...+.+++|+|+|+++++++ .++.|.+||+.+ +.... .+ ...+.+++|+|+| +++++ .+
T Consensus 121 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 121 VVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp EEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred ccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC
Confidence 4444443 34589999999999888777 899999999987 64421 22 2256789999999 44444 67
Q ss_pred CcEEEEcCCCC-Ccc--ccccccccC--CCCcceeEEEEccCCCEEEEE-eCCCeEEEEEcC
Q 040274 168 SFAQILGDFSG-SHN--YSRYMGNSM--VKGYQIGKVSFRPYEDVLGIG-HSMGWSGILVPR 223 (359)
Q Consensus 168 ~~i~v~d~~~~-~~~--~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~g-~~dg~~~i~~~g 223 (359)
+.|.+||+... +.. ......... .....+.+++|+|+|++|+++ ..++.+.+|...
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 89999997432 111 111111100 012256789999999988754 468888888765
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=1.1e-14 Score=132.13 Aligned_cols=158 Identities=6% Similarity=0.044 Sum_probs=124.5
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML 106 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~ 106 (359)
.++.|+|+|+++++++. .+.+++|+|++.++++++.++.|.+||+.+++.+..+.
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 56899999998877651 37889999999999999999999999999998877766
Q ss_pred c----CCCCeEEEEEecCCCEEEEecC-CCeEEEEEcCCCeeeEeec-CCceeEEEcCCC--cEEEE-cCCcEEEEcCCC
Q 040274 107 Y----HQGPVSALAFHPNGHLMATTGK-ECKIKIWDLRKYEVLQTLT-GHAKTLDFSQKG--LLAVG-TGSFAQILGDFS 177 (359)
Q Consensus 107 ~----h~~~v~~l~~~p~g~~l~s~~~-d~~i~vwd~~~~~~~~~~~-~~v~~~~~s~~g--l~~~~-~d~~i~v~d~~~ 177 (359)
. +...+.+++|+|+|.++++++. ++.|.+||+.+++.+..+. +...+++|+|+| +++++ .++.|.+||+.+
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 4 4556888999999997766654 5999999999998877773 335789999999 44444 579999999654
Q ss_pred CCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 178 GSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
. .....+... ..+.+++|+|+|++|++++.++
T Consensus 304 ~-~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 304 Y-KVVKTFDTP-----THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp T-EEEEEEECC-----SEEEEEEECTTSCEEEEEEECC
T ss_pred C-eEEEEEecC-----CCCCeEEEcCCCCEEEEEEccc
Confidence 4 444443332 2689999999999887777664
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.64 E-value=1.5e-14 Score=130.28 Aligned_cols=165 Identities=8% Similarity=-0.003 Sum_probs=123.2
Q ss_pred eEEEECCCCCEEEEecc-----------------------------ceeEEEEcCCCCEEEEEe------------CCCe
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------------RTDLMRVNPFNGVVSLGH------------SGGT 90 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------------~v~~l~~sp~~~~l~tg~------------~dg~ 90 (359)
.+++|+|||+++++++. .+.+++|+|++.+|++++ .++.
T Consensus 37 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 1pby_B 37 MVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116 (337)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCce
Confidence 57889999987755432 135689999999988886 5799
Q ss_pred EEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec----------------------
Q 040274 91 VTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---------------------- 148 (359)
Q Consensus 91 v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---------------------- 148 (359)
|.+||+.+++.+..+.. ...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+.
T Consensus 117 i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 193 (337)
T 1pby_B 117 VALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHE 193 (337)
T ss_dssp EEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCT
T ss_pred EEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeecc
Confidence 99999999887777654 4567889999999988887 6889999998876654331
Q ss_pred -----------------------------------------------CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCc
Q 040274 149 -----------------------------------------------GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSH 180 (359)
Q Consensus 149 -----------------------------------------------~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~ 180 (359)
..+.+++|+|+| ++.++ ++.|.+||+.+. .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~-~ 271 (337)
T 1pby_B 194 SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKN-A 271 (337)
T ss_dssp TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTT-E
T ss_pred CCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCC-c
Confidence 012358999999 44444 789999996543 3
Q ss_pred cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 181 NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 181 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
....+... ..+.+++|+|+|++|++++.++.+.+|...++.
T Consensus 272 ~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 272 SIKRVPLP-----HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEEEECS-----SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CcceecCC-----CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 33333322 257899999999999998888888888765543
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.63 E-value=5e-14 Score=126.99 Aligned_cols=156 Identities=12% Similarity=0.114 Sum_probs=114.9
Q ss_pred ceeEEEEcCCCCEEEEEeC-CCeEEEEeCCCCcc-eEEeecCCCCeEEEEEecCCCEEEEecCCC---eEEEEEcCCCee
Q 040274 69 RTDLMRVNPFNGVVSLGHS-GGTVTMWKPTTSAL-LIKMLYHQGPVSALAFHPNGHLMATTGKEC---KIKIWDLRKYEV 143 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~-dg~v~lwd~~~~~~-~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~---~i~vwd~~~~~~ 143 (359)
.+ +++|+|++.++++++. ++.|.+||+.++.. ...+..+..++.+++|+|+|++|+++..++ .|.+||+.+++.
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe
Confidence 45 9999999997666665 88999999999987 677777777766699999999999665553 899999999988
Q ss_pred eEeec--CCceeEEEcCCC--cEEE-EcCCc-EEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CCCe
Q 040274 144 LQTLT--GHAKTLDFSQKG--LLAV-GTGSF-AQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMGW 216 (359)
Q Consensus 144 ~~~~~--~~v~~~~~s~~g--l~~~-~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg~ 216 (359)
+..+. ..+.+++|+|+| ++++ ..++. |.+|++...+...... ......+..+.+++|+|+|++|++++ .++.
T Consensus 121 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 121 ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCCCCe
Confidence 87773 456899999999 4444 44578 9999976543322111 11001233589999999999665554 5788
Q ss_pred EEEEEcCCCC
Q 040274 217 SGILVPRSSE 226 (359)
Q Consensus 217 ~~i~~~gs~~ 226 (359)
+.+|...++.
T Consensus 200 v~v~d~~~~~ 209 (331)
T 3u4y_A 200 IGILETQNPE 209 (331)
T ss_dssp EEEEECSSTT
T ss_pred EEEEECCCCc
Confidence 8888765544
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=8.2e-14 Score=126.65 Aligned_cols=167 Identities=11% Similarity=0.107 Sum_probs=116.5
Q ss_pred eEEEECCCCCEEEEecc-----------------------c-------------eeEEEEcCCCCEEEEEeCCCeEEEEe
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------R-------------TDLMRVNPFNGVVSLGHSGGTVTMWK 95 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~-------------v~~l~~sp~~~~l~tg~~dg~v~lwd 95 (359)
..++|+|||++|++++. . +.+++|+|++.+++++..++.|.+|+
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 78999999998887763 0 45799999999666666788999999
Q ss_pred CC-CCcce--EEeecC-CCCeEEEEEecCCCEEEE-ecCCCeEEEEEcCC--Cee--eEee---c------CCceeEEEc
Q 040274 96 PT-TSALL--IKMLYH-QGPVSALAFHPNGHLMAT-TGKECKIKIWDLRK--YEV--LQTL---T------GHAKTLDFS 157 (359)
Q Consensus 96 ~~-~~~~~--~~~~~h-~~~v~~l~~~p~g~~l~s-~~~d~~i~vwd~~~--~~~--~~~~---~------~~v~~~~~s 157 (359)
+. ++... ..+..+ ...+..++|+|+|++|++ +..++.|.+||+.. +.. +..+ . ..+..++|+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 98 45432 222222 336788999999996555 56789999999874 443 2232 1 236789999
Q ss_pred CCC--c-EEEEcCCcEEEEcCCCCCc--cccccccccCCCCcceeEEEEccCCCEEEEEeCC-CeEEEEEc
Q 040274 158 QKG--L-LAVGTGSFAQILGDFSGSH--NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM-GWSGILVP 222 (359)
Q Consensus 158 ~~g--l-~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d-g~~~i~~~ 222 (359)
|+| + ++...++.|.+|++...+. ....+.. ++..+.+++|+|+|++|++++.+ +.+.+|..
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST----EGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC----SSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec----CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 999 3 3444578999999753321 1222222 23357899999999998887764 66777644
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.62 E-value=3.3e-15 Score=149.36 Aligned_cols=159 Identities=11% Similarity=0.030 Sum_probs=115.9
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeCC---------CeEEEEeCC
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHSG---------GTVTMWKPT 97 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~d---------g~v~lwd~~ 97 (359)
++++|+|||++++++.. .|.+++|||||++|++++.+ +.|.+||+.
T Consensus 20 ~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 20 PEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred cccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC
Confidence 88999999997766332 18899999999999999864 788999999
Q ss_pred CCcceEEee---cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecC---Cc------------------ee
Q 040274 98 TSALLIKML---YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG---HA------------------KT 153 (359)
Q Consensus 98 ~~~~~~~~~---~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~v------------------~~ 153 (359)
+++. ..+. .|...+.+++|||||+.|++++. +.|++||+.+++....... .+ .+
T Consensus 100 ~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 100 HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred CCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 8875 3333 44555899999999999999876 7999999998876554422 12 68
Q ss_pred EEEcCCC--cEEEEcCC----------------------------------cEEEEcCCCCCccccccccccC--CCCcc
Q 040274 154 LDFSQKG--LLAVGTGS----------------------------------FAQILGDFSGSHNYSRYMGNSM--VKGYQ 195 (359)
Q Consensus 154 ~~~s~~g--l~~~~~d~----------------------------------~i~v~d~~~~~~~~~~~~~~~~--~~~~~ 195 (359)
++||||| +++++.++ .|.+||+... .....+..+.. .+...
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP-THDLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS-CCCEECCCCCCGGGSSEE
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC-ceeEEeeCCccCCCccce
Confidence 9999999 55555432 7899996554 22222222100 01336
Q ss_pred eeEEEEccCCCEEEEEeC
Q 040274 196 IGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 196 v~~~~~sp~~~~l~~g~~ 213 (359)
+.+++|+|||++|++++.
T Consensus 257 ~~~~~~SpDg~~l~~~~~ 274 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLN 274 (723)
T ss_dssp EEEEEESSSSEEEEEEEE
T ss_pred eEEEEEeCCCeEEEEEEc
Confidence 899999999998877654
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=2.8e-14 Score=125.57 Aligned_cols=149 Identities=13% Similarity=-0.030 Sum_probs=109.9
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC-CcceEEeecC-CCCeEEEEEecCCCEEEEecC--CCe--EEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTT-SALLIKMLYH-QGPVSALAFHPNGHLMATTGK--ECK--IKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~-~~~~~~~~~h-~~~v~~l~~~p~g~~l~s~~~--d~~--i~vwd~~~~~ 142 (359)
.|.+++|+|++.+|++++ ++.|.+||+.+ +.....+..| ...+.+++|+|+|.+|++++. ++. |.+||+.++.
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc
Confidence 799999999999999987 78999999998 8777666555 367899999999999999883 344 5555555544
Q ss_pred eeEee--cCCceeEEEcCCC--cE-EEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CCCe
Q 040274 143 VLQTL--TGHAKTLDFSQKG--LL-AVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMGW 216 (359)
Q Consensus 143 ~~~~~--~~~v~~~~~s~~g--l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg~ 216 (359)
. ..+ ...+.+++|+|+| ++ +++.++.+.||++.........+..+. ..+.+++|+|+|.+|++++ .++.
T Consensus 122 ~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~~ 196 (297)
T 2ojh_A 122 P-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE----GRNDGPDYSPDGRWIYFNSSRTGQ 196 (297)
T ss_dssp C-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS----SCEEEEEECTTSSEEEEEECTTSS
T ss_pred e-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC----CccccceECCCCCEEEEEecCCCC
Confidence 3 333 3457889999999 44 566789899998533322333333332 3789999999999888766 4777
Q ss_pred EEEEEcC
Q 040274 217 SGILVPR 223 (359)
Q Consensus 217 ~~i~~~g 223 (359)
+.+|...
T Consensus 197 ~~i~~~~ 203 (297)
T 2ojh_A 197 MQIWRVR 203 (297)
T ss_dssp CEEEEEE
T ss_pred ccEEEEC
Confidence 7777543
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=5.4e-14 Score=126.76 Aligned_cols=167 Identities=11% Similarity=0.073 Sum_probs=118.7
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeE-EEEcCCCCEEEEEeCCC---eEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDL-MRVNPFNGVVSLGHSGG---TVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~-l~~sp~~~~l~tg~~dg---~v~lwd~~~~~~~~ 103 (359)
.+++|+|||++|++++. .... ++|+|++.+|+++..++ .|.+||+.+++.+.
T Consensus 43 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 43 VDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred ceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 48899999997766544 2333 99999999998655553 89999999998877
Q ss_pred EeecCCCCeEEEEEecCCCEEEEe-cCCCe-EEEEEcCCCeee-----Eee--cCCceeEEEcCCC--cEEEE-cCCcEE
Q 040274 104 KMLYHQGPVSALAFHPNGHLMATT-GKECK-IKIWDLRKYEVL-----QTL--TGHAKTLDFSQKG--LLAVG-TGSFAQ 171 (359)
Q Consensus 104 ~~~~h~~~v~~l~~~p~g~~l~s~-~~d~~-i~vwd~~~~~~~-----~~~--~~~v~~~~~s~~g--l~~~~-~d~~i~ 171 (359)
.+..+ ....+++|+|+|++|+++ ..++. |.+|++.....+ ..+ ...+.+++|+|+| +++++ .++.|.
T Consensus 123 ~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 123 TIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp EEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEE
Confidence 77554 456899999999855544 55577 999998753322 112 2347899999999 44444 578999
Q ss_pred EEcCCCCCcc---ccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeEEEEEcCCC
Q 040274 172 ILGDFSGSHN---YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWSGILVPRSS 225 (359)
Q Consensus 172 v~d~~~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~~i~~~gs~ 225 (359)
+||+... .. ...+... ..+.+++|+|+|++|++++. ++.+.+|...++
T Consensus 202 v~d~~~~-~~~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 202 ILETQNP-ENITLLNAVGTN-----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EEECSST-TSCEEEEEEECS-----SCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred EEECCCC-cccceeeeccCC-----CCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 9996554 33 3333322 35788999999998776654 666777766543
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.61 E-value=1.1e-14 Score=145.23 Aligned_cols=168 Identities=11% Similarity=0.133 Sum_probs=121.1
Q ss_pred eEEEECCCCCEEEEecc---------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC-----CcceEEe
Q 040274 52 ILWILPSSGRYMAVAGR---------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTT-----SALLIKM 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~-----~~~~~~~ 105 (359)
.+++|||| .+++++.. .+.+++|||+|+.|+++ .|+.|++||+.+ ++.....
T Consensus 85 ~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 85 FRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp EEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC
T ss_pred eeEEECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec
Confidence 88999999 55554433 57789999999999985 679999999998 7766544
Q ss_pred ecCCCC--------------eEEEEEecCCCEEEEec---------------------------------CCCeEEEEEc
Q 040274 106 LYHQGP--------------VSALAFHPNGHLMATTG---------------------------------KECKIKIWDL 138 (359)
Q Consensus 106 ~~h~~~--------------v~~l~~~p~g~~l~s~~---------------------------------~d~~i~vwd~ 138 (359)
..+... +.++.|+|||++|++++ .+..|++||+
T Consensus 163 ~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~ 242 (706)
T 2z3z_A 163 IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL 242 (706)
T ss_dssp SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET
T ss_pred cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC
Confidence 444333 48999999999999987 4578999999
Q ss_pred CCCeeeEeec-----CCceeEEEcCCC--cEEEEcCC-----cEEEEcCCCCCccccccccccCCCCcceeEEEEcc--C
Q 040274 139 RKYEVLQTLT-----GHAKTLDFSQKG--LLAVGTGS-----FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP--Y 204 (359)
Q Consensus 139 ~~~~~~~~~~-----~~v~~~~~s~~g--l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~ 204 (359)
.+++...... ..+.+++|+||| +++++.++ .|.+||+.++.................+.++.|+| +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d 322 (706)
T 2z3z_A 243 ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN 322 (706)
T ss_dssp TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS
T ss_pred CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC
Confidence 9887654431 347899999999 55555554 89999975542222222111110111246789999 9
Q ss_pred CCEEEEEeCCCeEEEEE
Q 040274 205 EDVLGIGHSMGWSGILV 221 (359)
Q Consensus 205 ~~~l~~g~~dg~~~i~~ 221 (359)
|++|++++.+|.+.||.
T Consensus 323 g~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 323 NQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp SEEEEEECTTSSCEEEE
T ss_pred CEEEEEEccCCccEEEE
Confidence 99999998888777664
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=9.3e-14 Score=126.31 Aligned_cols=172 Identities=12% Similarity=0.054 Sum_probs=115.0
Q ss_pred eEEEECCCCCEEEEec---c------------------------ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCC-Cc--
Q 040274 52 ILWILPSSGRYMAVAG---R------------------------RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTT-SA-- 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~---~------------------------~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~-~~-- 100 (359)
..++|+|||+.++++. . .+..++|+|++++|++++ .++.|.+|++.. +.
T Consensus 43 ~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 43 TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALT 122 (347)
T ss_dssp CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEE
T ss_pred ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCee
Confidence 6799999999444432 1 567899999999888887 689999999963 22
Q ss_pred ceEEeec---------CCCCeEEEEEecCCCEEEEecCCCeEEEEEcC-CCeee--Eee---c-CCceeEEEcCCC--cE
Q 040274 101 LLIKMLY---------HQGPVSALAFHPNGHLMATTGKECKIKIWDLR-KYEVL--QTL---T-GHAKTLDFSQKG--LL 162 (359)
Q Consensus 101 ~~~~~~~---------h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~-~~~~~--~~~---~-~~v~~~~~s~~g--l~ 162 (359)
.+..+.. +...+.+++|+|+|+++++...++.|.+||+. ++... ..+ . ..+..++|+|+| ++
T Consensus 123 ~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 123 LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred ecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 2333321 11248899999999977777778999999998 45432 222 1 246789999999 34
Q ss_pred EE-EcCCcEEEEcCCCC-Ccc--ccccccccC--CCCcceeEEEEccCCCEEE-EEeCCCeEEEEEcC
Q 040274 163 AV-GTGSFAQILGDFSG-SHN--YSRYMGNSM--VKGYQIGKVSFRPYEDVLG-IGHSMGWSGILVPR 223 (359)
Q Consensus 163 ~~-~~d~~i~v~d~~~~-~~~--~~~~~~~~~--~~~~~v~~~~~sp~~~~l~-~g~~dg~~~i~~~g 223 (359)
++ ..++.|.+|++... +.. ...+..... .....+..++|+|+|++|+ ++..++.+.+|...
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 43 35689999986531 111 111111110 0113588999999999875 45557777777653
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.61 E-value=1.2e-14 Score=151.51 Aligned_cols=162 Identities=12% Similarity=-0.024 Sum_probs=129.5
Q ss_pred eEEEEC-CCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEE-EEeCCCCcceEEeec
Q 040274 52 ILWILP-SSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVT-MWKPTTSALLIKMLY 107 (359)
Q Consensus 52 ~~l~~s-pdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~-lwd~~~~~~~~~~~~ 107 (359)
.+++|| |||++|++++. .+.+++|+ +|..|++++.++.+. +||+.++... .+.+
T Consensus 299 ~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~ 376 (1045)
T 1k32_A 299 FAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEE 376 (1045)
T ss_dssp GEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCC
T ss_pred ceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecC
Confidence 789999 99999887653 46778899 999999999888898 9999877644 3448
Q ss_pred CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC--cEEEEcC----------CcEEE
Q 040274 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG--LLAVGTG----------SFAQI 172 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g--l~~~~~d----------~~i~v 172 (359)
|...+.+++|+|||++|++++.++.|++||+.+++....+ .+.+.+++||||| +++++.+ +.|++
T Consensus 377 ~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 8889999999999999999999999999999998876655 3457899999999 5555543 38999
Q ss_pred EcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 173 LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 173 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
||+..+ . ...+..|. ..+.+++|+|+|++|++++.++...+|.
T Consensus 457 ~d~~~g-~-~~~l~~~~----~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 457 YDMEGR-K-IFAATTEN----SHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EETTTT-E-EEECSCSS----SBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred EECCCC-c-EEEeeCCC----cccCCceEcCCCCEEEEEecccCCcCcc
Confidence 997554 3 33444443 3688899999999999999877655554
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.60 E-value=1.5e-14 Score=144.45 Aligned_cols=159 Identities=9% Similarity=0.006 Sum_probs=115.9
Q ss_pred eEEEECCCCCEEEEecc----------------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q 040274 52 ILWILPSSGRYMAVAGR----------------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPT 97 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~ 97 (359)
.+++|||||++|++++. .+.+++|||||+.|++++. +.|++||+.
T Consensus 64 ~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 64 IRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp SEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred ceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 68999999999998742 1678999999999999886 799999999
Q ss_pred CCcceEEeecCCCCe------------------EEEEEecCCCEEEEecCCC----------------------------
Q 040274 98 TSALLIKMLYHQGPV------------------SALAFHPNGHLMATTGKEC---------------------------- 131 (359)
Q Consensus 98 ~~~~~~~~~~h~~~v------------------~~l~~~p~g~~l~s~~~d~---------------------------- 131 (359)
++........+...+ .+++|+|||++|++++.|+
T Consensus 143 ~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 143 GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 988766655544433 7899999999999887543
Q ss_pred ------eEEEEEcCCCeeeEeec---------CCceeEEEcCCC-cE-EEEc----CCcEEEEcCCCCCccccccccccC
Q 040274 132 ------KIKIWDLRKYEVLQTLT---------GHAKTLDFSQKG-LL-AVGT----GSFAQILGDFSGSHNYSRYMGNSM 190 (359)
Q Consensus 132 ------~i~vwd~~~~~~~~~~~---------~~v~~~~~s~~g-l~-~~~~----d~~i~v~d~~~~~~~~~~~~~~~~ 190 (359)
.|++||+.+++....+. ..+.+++||||| ++ +.+. +..|.+||+.++ .....+..+.
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~- 300 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHEDES- 300 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEEEEC-
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEEecc-
Confidence 79999999887544442 236789999999 44 4432 257999996554 3333332221
Q ss_pred CCCcce----eEEEEccCCCEEEEE--eCCC
Q 040274 191 VKGYQI----GKVSFRPYEDVLGIG--HSMG 215 (359)
Q Consensus 191 ~~~~~v----~~~~~sp~~~~l~~g--~~dg 215 (359)
...+ .+++|+|||+.|+.. ..++
T Consensus 301 --~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 301 --EAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp --SSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred --CCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 1122 378999999977754 4566
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.59 E-value=5.5e-14 Score=127.27 Aligned_cols=163 Identities=11% Similarity=-0.048 Sum_probs=118.3
Q ss_pred eEEEECCCCCEEEEecc----------------------c--------eeEEEEcCCCCEEEEEeCC------------C
Q 040274 52 ILWILPSSGRYMAVAGR----------------------R--------TDLMRVNPFNGVVSLGHSG------------G 89 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~--------v~~l~~sp~~~~l~tg~~d------------g 89 (359)
..++|+|||+++++++. . +.+++|+|+|++|++++.+ +
T Consensus 46 ~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 125 (349)
T 1jmx_B 46 GTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 125 (349)
T ss_dssp CEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred ceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCC
Confidence 67899999997665432 1 6789999999999998865 8
Q ss_pred eEEEEeCCCCcc---eEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecC-----------------
Q 040274 90 TVTMWKPTTSAL---LIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG----------------- 149 (359)
Q Consensus 90 ~v~lwd~~~~~~---~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~----------------- 149 (359)
.|.+||+.++.. +..+. +...+.+++|+|+|+ +++++. .|.+||+.+++.+..+..
T Consensus 126 ~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
T 1jmx_B 126 RLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFW 201 (349)
T ss_dssp EEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCC
T ss_pred eEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeee
Confidence 999999988543 33333 344688999999999 555544 399999988876655421
Q ss_pred ------------------------------------------------------CceeEEEcC-CC-cEEEEcCCcEEEE
Q 040274 150 ------------------------------------------------------HAKTLDFSQ-KG-LLAVGTGSFAQIL 173 (359)
Q Consensus 150 ------------------------------------------------------~v~~~~~s~-~g-l~~~~~d~~i~v~ 173 (359)
.+.+++|+| +| ++.++ ++.|.+|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~ 280 (349)
T 1jmx_B 202 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKY 280 (349)
T ss_dssp CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEE
T ss_pred cCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEE
Confidence 124567789 88 55555 8899999
Q ss_pred cCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 174 GDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 174 d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
|+.+. .....+... ..+.+++|+|+|++|++++.++.+.+|...++
T Consensus 281 d~~~~-~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 281 DLKQR-KLIKAANLD-----HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp ETTTT-EEEEEEECS-----SCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred ECccC-eEEEEEcCC-----CCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 96554 333333322 14788999999999888888888888876544
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.59 E-value=2.2e-14 Score=143.83 Aligned_cols=145 Identities=12% Similarity=0.096 Sum_probs=108.8
Q ss_pred ceeEEEEcCCCCEEEEEeC-CC-----eEEEEeCCCCcceEEeecCCCC------------------------eEEEEEe
Q 040274 69 RTDLMRVNPFNGVVSLGHS-GG-----TVTMWKPTTSALLIKMLYHQGP------------------------VSALAFH 118 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~-dg-----~v~lwd~~~~~~~~~~~~h~~~------------------------v~~l~~~ 118 (359)
.+.+++|||||++|++++. |+ .|++||+.+++....+..+... |.+++|+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 5889999999999999988 88 8999999998877666554333 7899999
Q ss_pred cCCCEEEEecCCCeEEEEEcCCC---eeeEee--cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCC-
Q 040274 119 PNGHLMATTGKECKIKIWDLRKY---EVLQTL--TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMV- 191 (359)
Q Consensus 119 p~g~~l~s~~~d~~i~vwd~~~~---~~~~~~--~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~- 191 (359)
|||++|++++. +.|++||+.++ ...... ...+.+++||||| .++.+.++.|++||+..+ ........+...
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g-~~~~~~~~~~~~~ 195 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASG-RQMQLTADGSTTI 195 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTT-EEEECCCCCCSSE
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCC-CEEEeccCCccce
Confidence 99999999886 99999999987 433222 4568999999999 666666789999996553 222222211100
Q ss_pred -----------CCcceeEEEEccCCCEEEEEeCCC
Q 040274 192 -----------KGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 192 -----------~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
....+.++.|||||++|++++.++
T Consensus 196 ~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 196 GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp EESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred eccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 000147899999999999987664
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.57 E-value=9.2e-13 Score=120.42 Aligned_cols=150 Identities=11% Similarity=0.088 Sum_probs=101.8
Q ss_pred eEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcc------e-------EEeecCCCCeEEEEEecCCCEEEEec-CCCeEEE
Q 040274 71 DLMRVNPFNGVVSLGH-SGGTVTMWKPTTSAL------L-------IKMLYHQGPVSALAFHPNGHLMATTG-KECKIKI 135 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~~~------~-------~~~~~h~~~v~~l~~~p~g~~l~s~~-~d~~i~v 135 (359)
++++|+|++++|++++ .++.|.+|++..... + .....+...+.+++|+|+|+++++++ .++.|.+
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 6699999999766655 588999998875432 1 11223455678999999999887766 6899999
Q ss_pred EEcCCCee--eEeec------CCceeEEEcCCC--cEEEEc--CCcEEEEcCCCCCccccccccccCCCCcceeEEEEcc
Q 040274 136 WDLRKYEV--LQTLT------GHAKTLDFSQKG--LLAVGT--GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRP 203 (359)
Q Consensus 136 wd~~~~~~--~~~~~------~~v~~~~~s~~g--l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 203 (359)
||+.++.. +..+. ..+.+++|+|+| +++++. ++.|.+|++.............. .+..+.+++|+|
T Consensus 238 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~g~~~~~~~~sp 315 (361)
T 3scy_A 238 FRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL--TGIHPRNFIITP 315 (361)
T ss_dssp EEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--CSSCCCEEEECT
T ss_pred EEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--CCCCCceEEECC
Confidence 99987754 33332 124699999999 445454 47899999742211211111111 123578999999
Q ss_pred CCCEEEEEe-CCCeEEEEEc
Q 040274 204 YEDVLGIGH-SMGWSGILVP 222 (359)
Q Consensus 204 ~~~~l~~g~-~dg~~~i~~~ 222 (359)
+|++|++++ .++.+.+|..
T Consensus 316 dg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 316 NGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp TSCEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEE
Confidence 999988887 5676777543
No 151
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.56 E-value=2.9e-13 Score=131.01 Aligned_cols=171 Identities=11% Similarity=0.083 Sum_probs=126.0
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEEEEcC----CCCEEEEEe-CCCeEEEEeCCCCcce
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLMRVNP----FNGVVSLGH-SGGTVTMWKPTTSALL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l~~sp----~~~~l~tg~-~dg~v~lwd~~~~~~~ 102 (359)
++++|+|||++|++++. .+..++|+| +|+++++++ .+++|.+||..+++++
T Consensus 182 ~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 182 HISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 261 (543)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE
T ss_pred ceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc
Confidence 77889999999998775 467899999 999999988 4899999999999988
Q ss_pred EEeec----------CCC-CeEEEEEecCCCE-EEEecCCCeEEEEEcCCCeeeE--ee--cCCceeEEEcCCC--cEEE
Q 040274 103 IKMLY----------HQG-PVSALAFHPNGHL-MATTGKECKIKIWDLRKYEVLQ--TL--TGHAKTLDFSQKG--LLAV 164 (359)
Q Consensus 103 ~~~~~----------h~~-~v~~l~~~p~g~~-l~s~~~d~~i~vwd~~~~~~~~--~~--~~~v~~~~~s~~g--l~~~ 164 (359)
..+.. |.. .+.++.++|++.. +++...++.|.+||+.+...+. .+ ...+.++.|+|+| ++++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEE
Confidence 88764 223 7899999997665 5667789999999998865443 33 3457899999999 4444
Q ss_pred E-cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccC-CCEEEEEe-CCCeEEEEEcCC
Q 040274 165 G-TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY-EDVLGIGH-SMGWSGILVPRS 224 (359)
Q Consensus 165 ~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~g~-~dg~~~i~~~gs 224 (359)
+ .+++|.+||+.++ .....+.....+|......+ ++|+ +.++++++ .++.+.+|...+
T Consensus 342 ~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 342 ANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 4 4789999997654 45444443222122223333 5776 66667765 578888887655
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.55 E-value=3.2e-14 Score=142.25 Aligned_cols=142 Identities=11% Similarity=0.047 Sum_probs=104.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCC---CeEEEEEecCCCEEEEecC---------CCeEEEEEcC
Q 040274 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQG---PVSALAFHPNGHLMATTGK---------ECKIKIWDLR 139 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~---~v~~l~~~p~g~~l~s~~~---------d~~i~vwd~~ 139 (359)
+++|+|++.+++ .+.|+.|++||+.++++...+.+|.. .+.+++|||||++|++++. |+.|++||+.
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 567888885444 44699999999999987776665543 4899999999999998876 7899999999
Q ss_pred CCeee--EeecCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCC----CC---------cceeEEEEcc
Q 040274 140 KYEVL--QTLTGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMV----KG---------YQIGKVSFRP 203 (359)
Q Consensus 140 ~~~~~--~~~~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~----~~---------~~v~~~~~sp 203 (359)
+++.+ ..+...+.+++||||| .++.+.++.|++||+..+........++... +. ....+++|||
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 98874 3345678999999999 6666678999999975543211111111100 00 1125899999
Q ss_pred CCCEEEEEeCC
Q 040274 204 YEDVLGIGHSM 214 (359)
Q Consensus 204 ~~~~l~~g~~d 214 (359)
||++|++++.|
T Consensus 179 DG~~la~~~~d 189 (719)
T 1z68_A 179 NGKFLAYAEFN 189 (719)
T ss_dssp TSSEEEEEEEE
T ss_pred CCCEEEEEEEC
Confidence 99999998865
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.55 E-value=1.2e-13 Score=137.66 Aligned_cols=141 Identities=11% Similarity=0.126 Sum_probs=102.6
Q ss_pred eeEEEEcCCCCEEEEEe---------------------------------CCCeEEEEeCCCCcceEEee--cCCCCeEE
Q 040274 70 TDLMRVNPFNGVVSLGH---------------------------------SGGTVTMWKPTTSALLIKML--YHQGPVSA 114 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~---------------------------------~dg~v~lwd~~~~~~~~~~~--~h~~~v~~ 114 (359)
+.+++|||||++|++++ .+..|.+||+.++....... .|...+.+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 37899999999999987 34679999999887554432 46678999
Q ss_pred EEEecCCCEEEEecCCC-----eEEEEEcCCCeeeEee---c--C---CceeEEEcC--CC--cEEEEcCCcEEEEcCCC
Q 040274 115 LAFHPNGHLMATTGKEC-----KIKIWDLRKYEVLQTL---T--G---HAKTLDFSQ--KG--LLAVGTGSFAQILGDFS 177 (359)
Q Consensus 115 l~~~p~g~~l~s~~~d~-----~i~vwd~~~~~~~~~~---~--~---~v~~~~~s~--~g--l~~~~~d~~i~v~d~~~ 177 (359)
++|+|||++|++++.++ .|++||+.+++....+ . . .+.++.|+| +| +++++.++.+.||++..
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC
Confidence 99999999999887775 8999999998333322 1 1 236789999 99 55555678888887543
Q ss_pred CCccccccccccCCCCcceeE-EEEccCCCEEEEEeCC
Q 040274 178 GSHNYSRYMGNSMVKGYQIGK-VSFRPYEDVLGIGHSM 214 (359)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~~g~~d 214 (359)
.......+..+.. .+.+ +.|+|+|+.|++++.+
T Consensus 343 ~~~~~~~l~~~~~----~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 343 TGRLIRQVTKGEW----EVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp TSCEEEECCCSSS----CEEEEEEECTTSSEEEEEESS
T ss_pred CCCEEEecCCCCe----EEEeeeEEcCCCCEEEEEecC
Confidence 3334444444422 5666 7999999988766554
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.54 E-value=4.7e-14 Score=141.02 Aligned_cols=152 Identities=14% Similarity=0.103 Sum_probs=112.0
Q ss_pred eEEEECCCCCEEEEecc---------------------c----eeEEEEcCCCCEEEEEeC---------CCeEEEEeCC
Q 040274 52 ILWILPSSGRYMAVAGR---------------------R----TDLMRVNPFNGVVSLGHS---------GGTVTMWKPT 97 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------~----v~~l~~sp~~~~l~tg~~---------dg~v~lwd~~ 97 (359)
.++.|+|||++++++.. . +.+++|||||++|++++. ++.|++||+.
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 78899999987766543 2 889999999999998876 7899999999
Q ss_pred CCcce--EEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee-cC--------------------CceeE
Q 040274 98 TSALL--IKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-TG--------------------HAKTL 154 (359)
Q Consensus 98 ~~~~~--~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~-~~--------------------~v~~~ 154 (359)
+++.+ ..+ ...+.+++|||||+.|+++. |+.|++||+.++...... .+ ...++
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 88763 222 35688999999999999885 789999999887765432 11 11489
Q ss_pred EEcCCC--cEEEEcCC----------------------------------cEEEEcCCCCCccc--------cccccccC
Q 040274 155 DFSQKG--LLAVGTGS----------------------------------FAQILGDFSGSHNY--------SRYMGNSM 190 (359)
Q Consensus 155 ~~s~~g--l~~~~~d~----------------------------------~i~v~d~~~~~~~~--------~~~~~~~~ 190 (359)
+||||| +++++.+. .|.+||+..+ ... ..+..|
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~-- 251 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP-AYVGPQEVPVPAMIASS-- 251 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH-HHHCCEECCCCHHHHTS--
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC-CccceeEccCCccCCCC--
Confidence 999999 55555442 7889996543 221 112223
Q ss_pred CCCcceeEEEEccCCCEEEEEe
Q 040274 191 VKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 191 ~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
...+.+++|+||+.++++..
T Consensus 252 --~~~~~~~~~SpD~~~~~~~~ 271 (719)
T 1z68_A 252 --DYYFSWLTWVTDERVCLQWL 271 (719)
T ss_dssp --CEEEEEEEESSSSEEEEEEE
T ss_pred --cceEEEeEEeCCCeEEEEEe
Confidence 33689999999988777744
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.52 E-value=1.3e-13 Score=134.57 Aligned_cols=139 Identities=12% Similarity=0.025 Sum_probs=110.1
Q ss_pred eEEEEcCCCCEEEEEeCC----CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCC--eEEEEEcCCCeee
Q 040274 71 DLMRVNPFNGVVSLGHSG----GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC--KIKIWDLRKYEVL 144 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~~d----g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~--~i~vwd~~~~~~~ 144 (359)
.+++|||||++|++++.+ +.|++||+.+++.. .+..|.+.+.+++|+|||+.|++++.++ .|++||+.+++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 688999999999988877 78999999988754 6678889999999999999999888888 8999999988776
Q ss_pred EeecC---CceeEE--------EcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEE
Q 040274 145 QTLTG---HAKTLD--------FSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 145 ~~~~~---~v~~~~--------~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
.+.+ .+.+++ |+||| +++++.++.+.+|++ + .... .. ...|.+++|+ ++.+++++
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g-~~~~---~~----~~~v~~~~~s-dg~~l~~~ 299 (582)
T 3o4h_A 232 -DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--G-ERVE---AP----QGNHGRVVLW-RGKLVTSH 299 (582)
T ss_dssp -ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--T-EEEC---CC----SSEEEEEEEE-TTEEEEEE
T ss_pred -EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--C-Ceec---cC----CCceEEEEec-CCEEEEEE
Confidence 4432 355566 99999 666778999999997 3 3222 12 2368999999 99999888
Q ss_pred eCCCe-EEEEEc
Q 040274 212 HSMGW-SGILVP 222 (359)
Q Consensus 212 ~~dg~-~~i~~~ 222 (359)
+.+.. ..+|..
T Consensus 300 s~~~~p~~l~~~ 311 (582)
T 3o4h_A 300 TSLSTPPRIVSL 311 (582)
T ss_dssp EETTEEEEEEEE
T ss_pred cCCCCCCeEEEE
Confidence 87765 344443
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.51 E-value=4e-13 Score=131.06 Aligned_cols=163 Identities=11% Similarity=0.003 Sum_probs=111.3
Q ss_pred ceEEEECCCCCEEEEecc------------------------ceeEEEEcCCCCEEEEEeC---CCeEEEEeCCC--Ccc
Q 040274 51 HILWILPSSGRYMAVAGR------------------------RTDLMRVNPFNGVVSLGHS---GGTVTMWKPTT--SAL 101 (359)
Q Consensus 51 ~~~l~~spdg~~l~~~~~------------------------~v~~l~~sp~~~~l~tg~~---dg~v~lwd~~~--~~~ 101 (359)
-++++|+|||++||+++. .+.+++|+|+ .++++++. +....+|.+.. ...
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 399999999999998653 5788999999 77777765 45556655433 222
Q ss_pred eEEeecCCCCeEEEEEecCCC--EEEEecCCCeEEEEEcCCCeeeEeecCCceeEEEcCCC--cEEEEcC----CcEEEE
Q 040274 102 LIKMLYHQGPVSALAFHPNGH--LMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKG--LLAVGTG----SFAQIL 173 (359)
Q Consensus 102 ~~~~~~h~~~v~~l~~~p~g~--~l~s~~~d~~i~vwd~~~~~~~~~~~~~v~~~~~s~~g--l~~~~~d----~~i~v~ 173 (359)
...+..+ ..+...+|+|+|. ++++++.| .+.+||+.+++.......+..+++||||| +++++.+ +.|++|
T Consensus 103 ~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 103 EQRLEAV-KPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp CEECTTS-CSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred cccccCC-CCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence 2233322 2345678888875 34444444 45599999887655554444899999999 5545655 679999
Q ss_pred cCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC--eEEEEEc
Q 040274 174 GDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG--WSGILVP 222 (359)
Q Consensus 174 d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg--~~~i~~~ 222 (359)
|+..+ . ...+..+.. .+.+++|+|||++|+++..+| .+.+|..
T Consensus 181 d~~~g-~-~~~l~~~~~----~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 181 NLSSG-G-LRVFDSGEG----SFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp ETTTC-C-CEEECCSSC----EEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred cCCCC-C-ceEeecCCC----ccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 96554 2 234444433 689999999999999888888 4555543
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.50 E-value=2e-13 Score=142.20 Aligned_cols=156 Identities=10% Similarity=0.031 Sum_probs=123.6
Q ss_pred eEEEECCCCCEEEEecc--------------------------------ceeEEEEc-CCCCEEEEEeCCCeEEEEeCCC
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------------RTDLMRVN-PFNGVVSLGHSGGTVTMWKPTT 98 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------------~v~~l~~s-p~~~~l~tg~~dg~v~lwd~~~ 98 (359)
..++|||||++|+++.. .+.+++|+ |+|..|++++ ++.|.+|++.+
T Consensus 248 ~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 248 YPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp CEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTS
T ss_pred ceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCC
Confidence 57799999998877533 27899999 9999998887 78999999987
Q ss_pred CcceEEeecCCC-CeEEEEEecCCCEEEEecCCCeEE-EEEcCCCeeeEee--cCCceeEEEcCCC--cEEEEcCCcEEE
Q 040274 99 SALLIKMLYHQG-PVSALAFHPNGHLMATTGKECKIK-IWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAVGTGSFAQI 172 (359)
Q Consensus 99 ~~~~~~~~~h~~-~v~~l~~~p~g~~l~s~~~d~~i~-vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~~~d~~i~v 172 (359)
+... .+..|.. .+.+++|+ +|..|++++.++.+. +||+.++...... ...+.+++|||+| +++++.++.|++
T Consensus 327 ~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 327 TYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMT 404 (1045)
T ss_dssp SBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEE
Confidence 7643 4567777 89999999 999999998888899 9999877543322 3457899999999 667778899999
Q ss_pred EcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 173 LGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 173 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
||+.++ ........|.. .+.+++|+|||++|++++.++
T Consensus 405 ~d~~tg-~~~~~~~~~~~----~v~~~~~SpDG~~la~~~~~~ 442 (1045)
T 1k32_A 405 VDLETG-KPTVIERSREA----MITDFTISDNSRFIAYGFPLK 442 (1045)
T ss_dssp EETTTC-CEEEEEECSSS----CCCCEEECTTSCEEEEEEEEC
T ss_pred EECCCC-ceEEeccCCCC----CccceEECCCCCeEEEEecCc
Confidence 997554 33333334433 689999999999999887654
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.48 E-value=8.6e-12 Score=113.91 Aligned_cols=168 Identities=11% Similarity=0.195 Sum_probs=108.9
Q ss_pred eEEEECCCCCEEEEecc-------------------------------ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCC
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------------RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTTS 99 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------------~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~ 99 (359)
..++|+|||++|++++. ....+++ ++.+|++++ .++.|.+|++.+.
T Consensus 53 ~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 53 SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTT
T ss_pred ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCC
Confidence 66899999998876543 2334444 666666666 5789999999754
Q ss_pred cceEEe---ecC-----------CCCeEEEEEecCCCEEEEec-CCCeEEEEEcCCCe-------e-------eEee--c
Q 040274 100 ALLIKM---LYH-----------QGPVSALAFHPNGHLMATTG-KECKIKIWDLRKYE-------V-------LQTL--T 148 (359)
Q Consensus 100 ~~~~~~---~~h-----------~~~v~~l~~~p~g~~l~s~~-~d~~i~vwd~~~~~-------~-------~~~~--~ 148 (359)
..+..+ ..+ ...+++++|+|+|++|++++ .++.|.+|++.... . .... .
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG 210 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC
Confidence 332211 111 22358899999999665554 58899999987533 1 1112 2
Q ss_pred CCceeEEEcCCC--cEEEE-cCCcEEEEcCCCCCcc--ccccccccCCCCcceeEEEEccCCCEEEEEeCC--CeEEEEE
Q 040274 149 GHAKTLDFSQKG--LLAVG-TGSFAQILGDFSGSHN--YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM--GWSGILV 221 (359)
Q Consensus 149 ~~v~~~~~s~~g--l~~~~-~d~~i~v~d~~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d--g~~~i~~ 221 (359)
..+..++|+|+| +++++ .++.|.+||+..+ .. ...+..... +...+.+++|+|||++|+++..+ +.+.+|.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g-~~~~~~~~~~~~~-~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG-MLDEIQTVAADTV-NAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETT-EEEEEEEEESCSS-CCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC-ceEEeEEEecCCC-CCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 346889999999 44455 4789999996533 21 111222111 22346899999999998776654 7777776
Q ss_pred cC
Q 040274 222 PR 223 (359)
Q Consensus 222 ~g 223 (359)
..
T Consensus 289 ~~ 290 (361)
T 3scy_A 289 VD 290 (361)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.47 E-value=2.2e-12 Score=118.79 Aligned_cols=156 Identities=11% Similarity=0.012 Sum_probs=111.6
Q ss_pred EEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec
Q 040274 54 WILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY 107 (359)
Q Consensus 54 l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~ 107 (359)
.+|||||++|++++. .+.++.|+|++..|++++.++.|++||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999999987664 233678999999999999999999999999987766666
Q ss_pred CCCCeEEEE--EecCCCEEEEe----------------------cCCCeEEEEEcCCCeeeEee--cCCceeEEEcC-CC
Q 040274 108 HQGPVSALA--FHPNGHLMATT----------------------GKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQ-KG 160 (359)
Q Consensus 108 h~~~v~~l~--~~p~g~~l~s~----------------------~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~-~g 160 (359)
+...+.... ++|++.+++.. +.+..|++||+.+++..... ...+..+.||| +|
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC
Confidence 666554444 48999988742 24578999999988754433 45578999999 98
Q ss_pred --cEEEEcC------CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC
Q 040274 161 --LLAVGTG------SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 161 --l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
++.++.+ ..|.++|+... ....+..+. .+..+..+.|+|||+.|+..+.
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~--~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHA--EGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCC--TTEEEEEEEECTTSSCEEEEEE
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCC--CCcccccceECCCCCEEEEEec
Confidence 4444432 37888875332 222232221 1125788999999998765443
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.46 E-value=1.4e-12 Score=131.05 Aligned_cols=172 Identities=12% Similarity=0.019 Sum_probs=117.1
Q ss_pred eEEEECCCCCEEEEecc------------------------ce--eEEEEcCCCCEEEEEeCC---------CeEEEEeC
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RT--DLMRVNPFNGVVSLGHSG---------GTVTMWKP 96 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v--~~l~~sp~~~~l~tg~~d---------g~v~lwd~ 96 (359)
+++.|+|||++|+++.. .+ ..+.|||||++|++++.+ +.+.+||+
T Consensus 20 ~~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp CCEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 89999999999988732 12 337899999999998876 56779999
Q ss_pred CCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee-cCC--------------------ceeEE
Q 040274 97 TTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-TGH--------------------AKTLD 155 (359)
Q Consensus 97 ~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~--------------------v~~~~ 155 (359)
.+++.. .+..|.+.+..++|||||+.||.+ .|+.|++||+.++...+.. .+. ...+.
T Consensus 100 ~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 100 NKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp TTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred CCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 998754 466778889999999999999888 5789999999887654322 111 13589
Q ss_pred EcCCC--cEEEEcC-C-----------------------------------cEEEEcCCC---CCc-cccccccc---cC
Q 040274 156 FSQKG--LLAVGTG-S-----------------------------------FAQILGDFS---GSH-NYSRYMGN---SM 190 (359)
Q Consensus 156 ~s~~g--l~~~~~d-~-----------------------------------~i~v~d~~~---~~~-~~~~~~~~---~~ 190 (359)
||||| ++.++.| + .|.+||+.. +.. ....+... ..
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 99999 4444322 1 477788654 311 11111110 00
Q ss_pred CCCcceeEEEEccCCCEEEEEeCCC----eEEEEEcCCCC
Q 040274 191 VKGYQIGKVSFRPYEDVLGIGHSMG----WSGILVPRSSE 226 (359)
Q Consensus 191 ~~~~~v~~~~~sp~~~~l~~g~~dg----~~~i~~~gs~~ 226 (359)
+...+.+++|+|||++++.....+ .+.+|...++.
T Consensus 258 -~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 258 -GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp -SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred -CCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 223689999999999766554322 45555544443
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.46 E-value=3.7e-12 Score=116.90 Aligned_cols=172 Identities=9% Similarity=0.015 Sum_probs=113.8
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEEEEcCCCCE--EEEEe-------------CCCeEE
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLMRVNPFNGV--VSLGH-------------SGGTVT 92 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l~~sp~~~~--l~tg~-------------~dg~v~ 92 (359)
..++|+|||++|++++. .+.+++|+|+|++ +++++ .+|.+.
T Consensus 43 ~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~ 122 (365)
T 1jof_A 43 SWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGN 122 (365)
T ss_dssp SEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEE
T ss_pred cEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEE
Confidence 67899999998876543 1234667888884 44553 689999
Q ss_pred EEeCC-CCcceEEee----cCCCCeEEEEEecCCCEEEEec-CCCeEEEEEcC-CCeee--Eeec-----CCceeEEEcC
Q 040274 93 MWKPT-TSALLIKML----YHQGPVSALAFHPNGHLMATTG-KECKIKIWDLR-KYEVL--QTLT-----GHAKTLDFSQ 158 (359)
Q Consensus 93 lwd~~-~~~~~~~~~----~h~~~v~~l~~~p~g~~l~s~~-~d~~i~vwd~~-~~~~~--~~~~-----~~v~~~~~s~ 158 (359)
+|++. .+.....+. .+...+.+++|+|+|++|++++ .++.|.+||+. +++.. ..+. ..+..++|+|
T Consensus 123 v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 123 VFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 99997 455443333 2456799999999999888765 46899999998 67542 3332 2478899999
Q ss_pred CC--cEEEEc-CCcEEEEcCCC-CCccc---cccccccC-C--CCc------ceeEEE-EccCCCEEEEEeCCC------
Q 040274 159 KG--LLAVGT-GSFAQILGDFS-GSHNY---SRYMGNSM-V--KGY------QIGKVS-FRPYEDVLGIGHSMG------ 215 (359)
Q Consensus 159 ~g--l~~~~~-d~~i~v~d~~~-~~~~~---~~~~~~~~-~--~~~------~v~~~~-~sp~~~~l~~g~~dg------ 215 (359)
+| +++++. ++.|.+|++.. .+... ..+..... . +.. .+..++ |+|||++|++++.+.
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~ 282 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQG 282 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCC
T ss_pred CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCC
Confidence 99 444453 68999987532 22211 11111100 0 011 478999 999999988776432
Q ss_pred eEEEEEcC
Q 040274 216 WSGILVPR 223 (359)
Q Consensus 216 ~~~i~~~g 223 (359)
.+.+|...
T Consensus 283 ~i~v~~~~ 290 (365)
T 1jof_A 283 YIAGFKLR 290 (365)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 67777653
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.46 E-value=2.8e-12 Score=117.71 Aligned_cols=150 Identities=9% Similarity=0.030 Sum_probs=102.8
Q ss_pred ceeEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCcce--EEee--cCCCCeEEEEEecCCCEEEEecC-CCeEEEEEcC--
Q 040274 69 RTDLMRVNPFNGVVSLGHS-GGTVTMWKPT-TSALL--IKML--YHQGPVSALAFHPNGHLMATTGK-ECKIKIWDLR-- 139 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~-dg~v~lwd~~-~~~~~--~~~~--~h~~~v~~l~~~p~g~~l~s~~~-d~~i~vwd~~-- 139 (359)
.+++++|+|+|++|++++. ++.|.+|++. +++.. ..+. .|...+..++|+|+|++|++++. ++.|.+|++.
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC
Confidence 4678999999998887764 6799999998 67543 2333 24567899999999999887764 7899999875
Q ss_pred CCeee------Eeec----C---------CceeEE-EcCCC--cEEEEc-CC-----cEEEEcCCCCCcccc---ccccc
Q 040274 140 KYEVL------QTLT----G---------HAKTLD-FSQKG--LLAVGT-GS-----FAQILGDFSGSHNYS---RYMGN 188 (359)
Q Consensus 140 ~~~~~------~~~~----~---------~v~~~~-~s~~g--l~~~~~-d~-----~i~v~d~~~~~~~~~---~~~~~ 188 (359)
+++.. ..++ + .+..++ |+|+| +++++. ++ .|.+|++...+.... ....+
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 45532 1222 1 367899 99999 444443 23 899999753323221 11112
Q ss_pred cCCCCcceeEEEEcc---CCCEEEEEeCC-CeEEEEEc
Q 040274 189 SMVKGYQIGKVSFRP---YEDVLGIGHSM-GWSGILVP 222 (359)
Q Consensus 189 ~~~~~~~v~~~~~sp---~~~~l~~g~~d-g~~~i~~~ 222 (359)
...+..++|+| +|++|++++.+ +.+.+|..
T Consensus 306 ----~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 306 ----TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp ----SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ----CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 22467789999 89999988764 66666654
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=9.2e-13 Score=132.31 Aligned_cols=145 Identities=10% Similarity=0.067 Sum_probs=106.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCC-----eEEEEEecCCCEEEEecCC---------CeEE
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP-----VSALAFHPNGHLMATTGKE---------CKIK 134 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~-----v~~l~~~p~g~~l~s~~~d---------~~i~ 134 (359)
...++.|+|++.+++++ ||.|.+||+.++++...+.+|... ..+++|||||++|++++.+ +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35678999999888886 899999999999987777777643 2448899999999998876 5678
Q ss_pred EEEcCCCeeeEee--cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCC-----C--------CcceeE
Q 040274 135 IWDLRKYEVLQTL--TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMV-----K--------GYQIGK 198 (359)
Q Consensus 135 vwd~~~~~~~~~~--~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-----~--------~~~v~~ 198 (359)
+||+.++++.... .+.+..++||||| .++.+.++.|++||+..+.....+..++... . .....+
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 9999998865422 4568999999999 6677788999999975543221111121100 0 012245
Q ss_pred EEEccCCCEEEEEeCCC
Q 040274 199 VSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 199 ~~~sp~~~~l~~g~~dg 215 (359)
+.|||||+.|+.++.|.
T Consensus 176 ~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFND 192 (740)
T ss_dssp EEECTTSSEEEEEEEEC
T ss_pred eEECCCCCEEEEEEEcc
Confidence 89999999999887543
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=2.3e-12 Score=116.44 Aligned_cols=148 Identities=7% Similarity=-0.034 Sum_probs=107.1
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC-CCeEEEEEecCCCEE-EEecCCCeEEEEEcCCCeeeEeec-
Q 040274 72 LMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ-GPVSALAFHPNGHLM-ATTGKECKIKIWDLRKYEVLQTLT- 148 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-~~v~~l~~~p~g~~l-~s~~~d~~i~vwd~~~~~~~~~~~- 148 (359)
.+++++++.++++++.++.|.+||+.+++.+..+..+. ..+.+++|+|+|+++ ++++.++.|.+||+.+++.+..+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888899999999999999999998887776543 257899999999865 455678999999999998877663
Q ss_pred CC--------ceeEEEcCCC--cEEEEc------------CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCC
Q 040274 149 GH--------AKTLDFSQKG--LLAVGT------------GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED 206 (359)
Q Consensus 149 ~~--------v~~~~~s~~g--l~~~~~------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 206 (359)
.. +.+++|+|+| +++++. ++.|.+||+.++ ........... + ..+.+++|+|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~-~-~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG-LEAKPVRTFPM-P-RQVYLMRAADDGS 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG-GGBCCSEEEEC-C-SSCCCEEECTTSC
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc-cccceeeeccC-C-CcccceeECCCCc
Confidence 22 6899999999 555554 389999997543 22221111111 1 2588999999999
Q ss_pred EEEEEeCCCeEEEEEcCCC
Q 040274 207 VLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 207 ~l~~g~~dg~~~i~~~gs~ 225 (359)
+++++.+ +.+|...++
T Consensus 161 -l~~~~~~--i~~~d~~~~ 176 (349)
T 1jmx_B 161 -LYVAGPD--IYKMDVKTG 176 (349)
T ss_dssp -EEEESSS--EEEECTTTC
T ss_pred -EEEccCc--EEEEeCCCC
Confidence 5555433 666655443
No 165
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.43 E-value=6e-12 Score=115.63 Aligned_cols=152 Identities=13% Similarity=0.069 Sum_probs=118.5
Q ss_pred eEEEECCCCCEEEEecc-------------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~ 100 (359)
+.|++++.+.++++|+. .|+.|+| ++.+|+++ .++.|.+||+.+..
T Consensus 41 nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~ 117 (388)
T 1xip_A 41 QNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-TRNALYSLDLEELS 117 (388)
T ss_dssp BCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-ESSEEEEEESSSTT
T ss_pred cEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-cCCcEEEEEchhhh
Confidence 67888888888887774 5778889 88999999 88999999998876
Q ss_pred ceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecCCceeEEEcCCCcEEEEcCCcEEEEcCCCCCc
Q 040274 101 LLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSH 180 (359)
Q Consensus 101 ~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~ 180 (359)
.......|...+.++.+.+. .+++++.||.|.+||+..+.... +...|+|++|||+|++.+..||.+++|+.... .
T Consensus 118 ~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~-~ 193 (388)
T 1xip_A 118 EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNG-E 193 (388)
T ss_dssp CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSEEEEEETTSCEEEEEEETT-E
T ss_pred ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCceEEEEcCCcEEEEcCCCc-c
Confidence 66667778888988877654 38889999999999999877643 55679999999999888999999999985433 2
Q ss_pred c--cccc------ccccCCCCcceeEEEEccCCCEEEEE
Q 040274 181 N--YSRY------MGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 181 ~--~~~~------~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
. ...+ ..+.. +...|.++.|.+++.+|++-
T Consensus 194 ~~~k~~I~~Pp~~~~~~~-~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 194 MEKQFEFSLPSELEELPV-EEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEEECCCHHHHTSCT-TTSEEEEEEESSSSEEEEEE
T ss_pred ccccceecCCcccccccC-CCeeEEEEEEecCCeEEEEE
Confidence 1 2222 11111 23489999999999998863
No 166
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.40 E-value=6.3e-12 Score=112.89 Aligned_cols=138 Identities=12% Similarity=0.020 Sum_probs=104.3
Q ss_pred CEEEEEeCCCeEEEEeCCCCcceEEeecCCC--CeEEEEEecCCCEE-EEecCCCeEEEEEcCCCeeeEeec--C-----
Q 040274 80 GVVSLGHSGGTVTMWKPTTSALLIKMLYHQG--PVSALAFHPNGHLM-ATTGKECKIKIWDLRKYEVLQTLT--G----- 149 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~--~v~~l~~~p~g~~l-~s~~~d~~i~vwd~~~~~~~~~~~--~----- 149 (359)
.+|++++.++.|.+||+.+++.+..+..... .+.+++|+|+|+++ ++++.++.|.+||+.+++.+..+. .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999988877763322 47899999999765 566678999999999998877663 2
Q ss_pred -CceeEEEcCCC--cEEEE------------cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 150 -HAKTLDFSQKG--LLAVG------------TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 150 -~v~~~~~s~~g--l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
.+.+++|+|+| +++++ .++.|.+||+... .....+... ..+.+++|+|+|++|+++ +
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~-----~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL-SRRKAFEAP-----RQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT-EEEEEEECC-----SSCCCEEECTTSSCEEEE--S
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC-cEEEEEeCC-----CCcceeEECCCCCEEEEe--C
Confidence 67899999999 44443 4699999996543 333333322 257889999999988888 5
Q ss_pred CeEEEEEcCCC
Q 040274 215 GWSGILVPRSS 225 (359)
Q Consensus 215 g~~~i~~~gs~ 225 (359)
+.+.+|...++
T Consensus 154 ~~i~~~d~~~~ 164 (337)
T 1pby_B 154 RDLHVMDPEAG 164 (337)
T ss_dssp SSEEEEETTTT
T ss_pred CeEEEEECCCC
Confidence 67777766543
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.37 E-value=1.8e-10 Score=101.59 Aligned_cols=147 Identities=12% Similarity=0.084 Sum_probs=107.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee--cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML--YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+.+++++|++.++++...++.|.+||.. +..+..+. .+...+.+++++|+|+++++.+.++.|.+||.. +..+..
T Consensus 122 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 199 (286)
T 1q7f_A 122 HPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQ 199 (286)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEE
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEE
Confidence 47889999999988888888999999965 55555553 345578999999999988888889999999974 555666
Q ss_pred e--c---CCceeEEEcCCC-cEEEE-cCC-cEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEE
Q 040274 147 L--T---GHAKTLDFSQKG-LLAVG-TGS-FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSG 218 (359)
Q Consensus 147 ~--~---~~v~~~~~s~~g-l~~~~-~d~-~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~ 218 (359)
+ . ..+..++++++| ++++. .++ .|.+||. .+ .....+..+. ....+.+++|+|+|.++++ +.++.+.
T Consensus 200 ~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g-~~~~~~~~~~--~~~~~~~i~~~~~g~l~vs-~~~~~v~ 274 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DG-QLISALESKV--KHAQCFDVALMDDGSVVLA-SKDYRLY 274 (286)
T ss_dssp ESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TS-CEEEEEEESS--CCSCEEEEEEETTTEEEEE-ETTTEEE
T ss_pred EccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CC-CEEEEEcccC--CCCcceeEEECCCCcEEEE-CCCCeEE
Confidence 6 2 347899999999 55554 454 8999994 33 3444444332 2224789999999976665 5577666
Q ss_pred EEEc
Q 040274 219 ILVP 222 (359)
Q Consensus 219 i~~~ 222 (359)
+|..
T Consensus 275 v~~~ 278 (286)
T 1q7f_A 275 IYRY 278 (286)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6643
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=4.4e-11 Score=108.37 Aligned_cols=154 Identities=10% Similarity=0.068 Sum_probs=105.8
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEEEeCC-----------------
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSLGHSG----------------- 88 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~tg~~d----------------- 88 (359)
.++.|||||++|++++. .+.+++|+|+|+.|++++.+
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 67899999999987542 25789999999988887642
Q ss_pred ----------CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCC---------eEEEEEcCCCeeeEeecC
Q 040274 89 ----------GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC---------KIKIWDLRKYEVLQTLTG 149 (359)
Q Consensus 89 ----------g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~---------~i~vwd~~~~~~~~~~~~ 149 (359)
..|.+||+.+++.+..+.. . .+..++|+|+| ++++++.+. .|+++| +++.......
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~ 216 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK 216 (347)
T ss_dssp --------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE
T ss_pred cCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC
Confidence 5799999998876455544 3 78899999999 777775542 355555 5554322222
Q ss_pred CceeEEEcCCC--cEEEEcC--------CcEEEEcCCCCCccccccccccCCCCcceeE-EEEccCCCEEEEEeCCCeEE
Q 040274 150 HAKTLDFSQKG--LLAVGTG--------SFAQILGDFSGSHNYSRYMGNSMVKGYQIGK-VSFRPYEDVLGIGHSMGWSG 218 (359)
Q Consensus 150 ~v~~~~~s~~g--l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~~g~~dg~~~ 218 (359)
.....++|+| ++.++.+ ..|.+|| . +........+. ..+.+ +.|+ ++ ++++++.++...
T Consensus 217 -~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~----~~~~~~~~~s-dg-~~~~~~~~~~~~ 286 (347)
T 2gop_A 217 -VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVD----RGVGQAKIKD-GK-VYFTLFEEGSVN 286 (347)
T ss_dssp -ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCC----SEEEEEEEET-TE-EEEEEEETTEEE
T ss_pred -cceeeECCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCC----cccCCccEEc-Cc-EEEEEecCCcEE
Confidence 3333449999 5555533 3688887 2 23332333332 26776 8999 88 889999999888
Q ss_pred EE
Q 040274 219 IL 220 (359)
Q Consensus 219 i~ 220 (359)
||
T Consensus 287 l~ 288 (347)
T 2gop_A 287 LY 288 (347)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.36 E-value=7.2e-11 Score=106.70 Aligned_cols=167 Identities=11% Similarity=0.068 Sum_probs=119.5
Q ss_pred eEEEECCCCCEEEEecc---------------------------------ceeEEEEcC-CCCEEEEEe-CCCeEEEEeC
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------------RTDLMRVNP-FNGVVSLGH-SGGTVTMWKP 96 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------------~v~~l~~sp-~~~~l~tg~-~dg~v~lwd~ 96 (359)
..++++|+|+++++... ....|+++| ++.++++.+ .++.|.+|+
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 67888888887766543 256799999 788888876 689999999
Q ss_pred CCCcceEEeecC----------CCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEeec-----CCceeEEEcCCC
Q 040274 97 TTSALLIKMLYH----------QGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQTLT-----GHAKTLDFSQKG 160 (359)
Q Consensus 97 ~~~~~~~~~~~h----------~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~v~~~~~s~~g 160 (359)
.++..+..+... .....+++++|+ +.++++...++.|.+||..+++.+..+. ..+.+++|+| |
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 456666666422 234789999998 7778888889999999999888888772 3468899999 5
Q ss_pred -cEEEE--------cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 161 -LLAVG--------TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 161 -l~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
++... .+..|.+||...+ .....+..... +...+.+++|+|+|.++++...++.+.+|..
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g-~~~~~~~~~~~-~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSG-EIIDVFKPVRK-HFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTC-CEEEEECCSSS-CCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCC-eEEEEEcCCCC-ccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 22222 2358999996554 44444421111 2336899999999977777777776666654
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.34 E-value=3.6e-12 Score=117.43 Aligned_cols=159 Identities=8% Similarity=-0.022 Sum_probs=108.5
Q ss_pred eEEEECCCCCEEEEecc-------------------------c-eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEe
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------R-TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKM 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~-v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~ 105 (359)
.+++|||||++|++... . ..++.|+|+|+.|++++.++.|++||+.+++....+
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~ 118 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence 56789999999887532 2 233789999999999999999999999988766555
Q ss_pred ecCCCCeEE-------------------EEEecCCCEEEEe-----cCCCeEEEEEcCCCeeeEee--cCCceeEEEcC-
Q 040274 106 LYHQGPVSA-------------------LAFHPNGHLMATT-----GKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQ- 158 (359)
Q Consensus 106 ~~h~~~v~~-------------------l~~~p~g~~l~s~-----~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~- 158 (359)
..+.+.... +.|+|++..++.+ ..+..|++||+.+++..... ...+..+.|+|
T Consensus 119 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 119 TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCC
Confidence 544442222 3457777766554 35678999999988764444 44578999999
Q ss_pred CC--cEEEEcC------CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 159 KG--LLAVGTG------SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 159 ~g--l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
+| ++.++.+ ..|.+||+... .. ..+..+. ....+..+.|+|+|++|+.++.+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~-~~l~~~~--~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 199 DDSTVGFCHEGPHDLVDARMWLVNEDGS-NV-RKIKEHA--EGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEEEEEEECSCSSSCSCCCEEEETTSC-CC-EESSCCC--TTEEEEEEEECTTSSCEEEEEEE
T ss_pred CCCEEEEEecCCCCCCCceEEEEECCCC-ce-eEeeccC--CCccccceEECCCCCEEEEEecC
Confidence 67 4444433 36888885432 22 2222221 12358889999999988776543
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.33 E-value=2.2e-10 Score=101.60 Aligned_cols=158 Identities=18% Similarity=0.202 Sum_probs=113.3
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEE----e-------------C
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLG----H-------------S 87 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg----~-------------~ 87 (359)
.+++++|+|+++++... .++.++++|+|.++++. + .
T Consensus 72 ~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~ 151 (296)
T 3e5z_A 72 NGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELP 151 (296)
T ss_dssp EEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSS
T ss_pred ceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCC
Confidence 78899999998776532 24569999999988873 2 1
Q ss_pred CCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcC-CCee---eEee---cCCceeEEEcCCC
Q 040274 88 GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLR-KYEV---LQTL---TGHAKTLDFSQKG 160 (359)
Q Consensus 88 dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~-~~~~---~~~~---~~~v~~~~~s~~g 160 (359)
.+.|..++.. +. +..+..+....++++|+|+|++|++.+.++.|.+||+. ++.. ...+ .+.+.+++++++|
T Consensus 152 ~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 152 GRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG 229 (296)
T ss_dssp SCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS
T ss_pred CcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC
Confidence 3466666665 43 44455667778999999999998777888999999997 4443 2232 3346789999999
Q ss_pred -cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEE-ccCCCEEEEEeCCCeEEE
Q 040274 161 -LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSF-RPYEDVLGIGHSMGWSGI 219 (359)
Q Consensus 161 -l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~-sp~~~~l~~g~~dg~~~i 219 (359)
+++++ ++.|.+||.. + .....+..+ .. +++++| +|+++.|++++.++..++
T Consensus 230 ~l~v~~-~~~v~~~~~~-g-~~~~~~~~~----~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 230 LIWASA-GDGVHVLTPD-G-DELGRVLTP----QT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp CEEEEE-TTEEEEECTT-S-CEEEEEECS----SC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CEEEEc-CCeEEEECCC-C-CEEEEEECC----CC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 66666 8899999953 3 344444433 22 888999 589999988887764433
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=1.1e-10 Score=116.67 Aligned_cols=167 Identities=7% Similarity=-0.103 Sum_probs=116.2
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCe--------------
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGT-------------- 90 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~-------------- 90 (359)
.+++|||||++|+++.. .+.+++|+|||+.|++++.++.
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 57899999999997543 3567999999999999988766
Q ss_pred --EEEEeCCCCcce--EEee--cCCCCeEEEEEecCCCEEEEecC-----CCeEEEEEcCC------Ce-eeEeec---C
Q 040274 91 --VTMWKPTTSALL--IKML--YHQGPVSALAFHPNGHLMATTGK-----ECKIKIWDLRK------YE-VLQTLT---G 149 (359)
Q Consensus 91 --v~lwd~~~~~~~--~~~~--~h~~~v~~l~~~p~g~~l~s~~~-----d~~i~vwd~~~------~~-~~~~~~---~ 149 (359)
|++|++.++... ..+. .|...+.++.|+|||++|+.++. +..|++||+.+ +. ....+. .
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 999999887632 2223 24566889999999999887664 56899999986 43 234442 2
Q ss_pred CceeEEEcCCC--cEEEEcC----CcEEEEcCCCCCc-cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 150 HAKTLDFSQKG--LLAVGTG----SFAQILGDFSGSH-NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 150 ~v~~~~~s~~g--l~~~~~d----~~i~v~d~~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
.+. ..|+|+| ++..+.. ..|.+||+..... ....+..+. ....+.++.|++++.+++++..++...|++
T Consensus 288 ~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 288 GEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH--EKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp SCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC--SSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred cEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC--CCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 233 3588888 5544443 3699999655421 123333331 112588899998888888888888766654
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.30 E-value=6.3e-10 Score=97.99 Aligned_cols=165 Identities=9% Similarity=0.094 Sum_probs=116.6
Q ss_pred eEEEECCCCCEEEEecc----------------------------ceeEEEE-cCCCCEEEEEeC-CCeEEEEeCCCCcc
Q 040274 52 ILWILPSSGRYMAVAGR----------------------------RTDLMRV-NPFNGVVSLGHS-GGTVTMWKPTTSAL 101 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------------~v~~l~~-sp~~~~l~tg~~-dg~v~lwd~~~~~~ 101 (359)
.+++++++|+++++... .+.++++ .+++.++++... ++.|.+|| .++..
T Consensus 33 ~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~ 111 (286)
T 1q7f_A 33 SGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQF 111 (286)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCE
T ss_pred ceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcE
Confidence 66777777776665432 3567888 466766666543 88999999 45666
Q ss_pred eEEee-cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec-----CCceeEEEcCCC-cEEE-EcCCcEEEE
Q 040274 102 LIKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT-----GHAKTLDFSQKG-LLAV-GTGSFAQIL 173 (359)
Q Consensus 102 ~~~~~-~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~v~~~~~s~~g-l~~~-~~d~~i~v~ 173 (359)
+..+. .+...+.+++++|+|+++++...++.|.+||.. +..+..+. ..+.+++++++| ++++ ..++.|.+|
T Consensus 112 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 112 VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence 66654 344578999999999988888888999999964 55555552 247899999999 4444 457899999
Q ss_pred cCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCC-eEEEEEc
Q 040274 174 GDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG-WSGILVP 222 (359)
Q Consensus 174 d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg-~~~i~~~ 222 (359)
|. .+ .....+..+. ....+..++++|+|.++++...++ .+.+|.+
T Consensus 191 ~~-~g-~~~~~~~~~g--~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 191 NY-EG-QYLRQIGGEG--ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp ET-TC-CEEEEESCTT--TSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred cC-CC-CEEEEEccCC--ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 95 33 2333332221 113588999999999888887775 8888864
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.29 E-value=3.9e-10 Score=98.28 Aligned_cols=165 Identities=8% Similarity=-0.055 Sum_probs=116.6
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ 109 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~ 109 (359)
.+++++++|+.+++... .+.+++++|+|.++++...++.|.+|+..+.........+.
T Consensus 70 ~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 149 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL 149 (270)
T ss_dssp CCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC
T ss_pred ceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccC
Confidence 78889999886666532 57789999999888777778999999876554333222333
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEEEcCCC-cEEEE-cCCcEEEEcCCCCCccccc
Q 040274 110 GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLDFSQKG-LLAVG-TGSFAQILGDFSGSHNYSR 184 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~~~~ 184 (359)
..+.+++++|+|+++++...++.|.+||........... ..+.+++++++| ++.+. .++.|.+||.... ... .
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-~~~-~ 227 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-TST-V 227 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-CCE-E
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-cce-e
Confidence 467899999999988887788999999988765433321 457899999999 55444 4679999995432 221 1
Q ss_pred cccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 185 YMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 185 ~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
.... ....+.+++++|+|.++++...++.+.++.
T Consensus 228 ~~~~---~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 228 LPFT---GLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CCCC---SCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eccC---CCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 1111 113589999999998777777777665554
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.26 E-value=3.3e-10 Score=102.04 Aligned_cols=149 Identities=11% Similarity=0.071 Sum_probs=107.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCC----CeEEEEEcCCCeee
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE----CKIKIWDLRKYEVL 144 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d----~~i~vwd~~~~~~~ 144 (359)
.+.+++|+|++.+++++..++.|.+||+.+++....+..+...+.+++|+|+|++++++..+ +.|.+||..++...
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 56889999999988888889999999999887655444567789999999999988887766 68999999877654
Q ss_pred Eee-----cCCceeEEEcCCC-cEEEEcC-------CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEE
Q 040274 145 QTL-----TGHAKTLDFSQKG-LLAVGTG-------SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 145 ~~~-----~~~v~~~~~s~~g-l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
..+ ...+.+++++|+| ++.++.. +.|..||.... . ...+.... ..+..++|+|+|++|+++
T Consensus 126 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~~~----~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 126 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-T-VTPIIQNI----SVANGIALSTDEKVLWVT 199 (333)
T ss_dssp EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-C-EEEEEEEE----SSEEEEEECTTSSEEEEE
T ss_pred EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCC-E-EEEeecCC----CcccceEECCCCCEEEEE
Confidence 232 1347899999999 5555542 46677764322 2 22222221 147889999999866544
Q ss_pred -eCCCeEEEEEcC
Q 040274 212 -HSMGWSGILVPR 223 (359)
Q Consensus 212 -~~dg~~~i~~~g 223 (359)
+.++.+.+|...
T Consensus 200 ~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 200 ETTANRLHRIALE 212 (333)
T ss_dssp EGGGTEEEEEEEC
T ss_pred eCCCCeEEEEEec
Confidence 456777777653
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.26 E-value=8.5e-11 Score=116.18 Aligned_cols=148 Identities=10% Similarity=-0.020 Sum_probs=103.6
Q ss_pred eeEEEEcCCCCEEEEEeCC----------CeEEEEeCCC------CcceEEee-cCCCCeEEEEEecCCCEEEEecCC--
Q 040274 70 TDLMRVNPFNGVVSLGHSG----------GTVTMWKPTT------SALLIKML-YHQGPVSALAFHPNGHLMATTGKE-- 130 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~d----------g~v~lwd~~~------~~~~~~~~-~h~~~v~~l~~~p~g~~l~s~~~d-- 130 (359)
+.+++|+|||+.|++++.+ ..|++||+.+ +. ...+. .+...+.+++|+|||++|+.++.+
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~ 210 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHP 210 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTT
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECCCC
Confidence 4678899999999998876 5899999987 54 34555 556778899999999999887755
Q ss_pred ------CeEEEEEcC-CC---eeeEee---cCCceeEEEcCCC-cE-EEEcCC--cEEEEcCCCCCccccccccccCCCC
Q 040274 131 ------CKIKIWDLR-KY---EVLQTL---TGHAKTLDFSQKG-LL-AVGTGS--FAQILGDFSGSHNYSRYMGNSMVKG 193 (359)
Q Consensus 131 ------~~i~vwd~~-~~---~~~~~~---~~~v~~~~~s~~g-l~-~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~ 193 (359)
..|++||+. ++ ...... ...+..+.|+||| ++ +++.++ .|.+||+..+ ........+.. ..
T Consensus 211 ~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~-~~ 288 (662)
T 3azo_A 211 RMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG-AATQLCRREEE-FA 288 (662)
T ss_dssp CCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC-CEEESSCCSSB-SS
T ss_pred CCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC-ceeeccccccc-cc
Confidence 379999999 56 433332 3567899999999 44 444566 6777774333 22222222211 00
Q ss_pred -----cceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 194 -----YQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 194 -----~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
..+.+++|+|++.++++++. +...||.
T Consensus 289 ~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 289 GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred CccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 01567899999999999888 7777763
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.25 E-value=9.4e-11 Score=115.87 Aligned_cols=145 Identities=10% Similarity=0.039 Sum_probs=100.8
Q ss_pred EEEEc--CCCCE-EEEEeC-CCeEEEEeCC--C-CcceEEeec-----CCCCeEEEEEecCCCEEEEecCC---------
Q 040274 72 LMRVN--PFNGV-VSLGHS-GGTVTMWKPT--T-SALLIKMLY-----HQGPVSALAFHPNGHLMATTGKE--------- 130 (359)
Q Consensus 72 ~l~~s--p~~~~-l~tg~~-dg~v~lwd~~--~-~~~~~~~~~-----h~~~v~~l~~~p~g~~l~s~~~d--------- 130 (359)
...|+ |||+. |+.++. +..|.+|++. + +. ...+.. |...+.+++|+|||+.|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 55565 99988 776654 5677777776 3 43 444544 66788999999999999998877
Q ss_pred -CeEEEEEcCC------CeeeEee---cCCceeEEEcCCC--cEEEEcC--------CcEEEEcCCCCC---cccccccc
Q 040274 131 -CKIKIWDLRK------YEVLQTL---TGHAKTLDFSQKG--LLAVGTG--------SFAQILGDFSGS---HNYSRYMG 187 (359)
Q Consensus 131 -~~i~vwd~~~------~~~~~~~---~~~v~~~~~s~~g--l~~~~~d--------~~i~v~d~~~~~---~~~~~~~~ 187 (359)
..|++||+.+ +...... ...+..++||||| ++.++.+ ..|.+||+...+ ........
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5899999987 5543322 2346789999999 5555544 379999975332 22222222
Q ss_pred ccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 188 NSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 188 ~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+ ...+.++.|+|||++++++..++...||.
T Consensus 240 ~----~~~~~~~~~spdg~l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 240 P----EEAIAQAEWAPDGSLIVATDRTGWWNLHR 269 (662)
T ss_dssp T----TBCEEEEEECTTSCEEEEECTTSSCEEEE
T ss_pred C----CceEcceEECCCCeEEEEECCCCCeEEEE
Confidence 2 23689999999999888888888555554
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.25 E-value=3.7e-11 Score=110.52 Aligned_cols=136 Identities=10% Similarity=-0.018 Sum_probs=100.6
Q ss_pred EEEcCCCCEEEEEeC-CC--eEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--
Q 040274 73 MRVNPFNGVVSLGHS-GG--TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-- 147 (359)
Q Consensus 73 l~~sp~~~~l~tg~~-dg--~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~-- 147 (359)
.+|+|||++|++++. +| .|.+||+.+++......++...+.++.|+|||+.|++++.++.|++||+.+++....+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999999998887 66 4888999988877666666666667889999999999999999999999998765444
Q ss_pred cCC-ceeE--EEcCCC-cEEEE-----------------------cCCcEEEEcCCCCCccccccccccCCCCcceeEEE
Q 040274 148 TGH-AKTL--DFSQKG-LLAVG-----------------------TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVS 200 (359)
Q Consensus 148 ~~~-v~~~--~~s~~g-l~~~~-----------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~ 200 (359)
... +... .++|+| ++++. .+..|.+||+.++ . ...+..+.. .+..+.
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-~-~~~l~~~~~----~~~~~~ 194 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-E-STVILQENQ----WLGHPI 194 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-C-EEEEEEESS----CEEEEE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC-c-eEEeecCCc----cccccE
Confidence 222 2223 348998 44421 2367899997654 2 233333322 589999
Q ss_pred Ecc-CCCEEEEEeCC
Q 040274 201 FRP-YEDVLGIGHSM 214 (359)
Q Consensus 201 ~sp-~~~~l~~g~~d 214 (359)
|+| +|..|+.++.+
T Consensus 195 ~sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 195 YRPYDDSTVAFCHEG 209 (388)
T ss_dssp EETTEEEEEEEEECS
T ss_pred ECCCCCCEEEEEEec
Confidence 999 99998877754
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.24 E-value=2.2e-09 Score=96.65 Aligned_cols=169 Identities=7% Similarity=-0.047 Sum_probs=117.1
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCC----CeEEEEeCCCCcceEE
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSG----GTVTMWKPTTSALLIK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~d----g~v~lwd~~~~~~~~~ 104 (359)
.+++|+|+|+.++++.. .+.+++++|++.+++++..+ +.|.+||+.++.....
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 67888999997766543 47889999999888877766 6899999987765433
Q ss_pred ee--cCCCCeEEEEEecCCCEEEEecC------CCeEEEEEcCCCeeeEee--cCCceeEEEcCCC--cEEE-EcCCcEE
Q 040274 105 ML--YHQGPVSALAFHPNGHLMATTGK------ECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG--LLAV-GTGSFAQ 171 (359)
Q Consensus 105 ~~--~h~~~v~~l~~~p~g~~l~s~~~------d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l~~~-~~d~~i~ 171 (359)
+. .+...+++++++|+|.++++... .+.|..||..+++..... ...+..++|+|+| ++.+ +.++.|.
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 32 24457899999999998887654 356777776655443222 2457889999998 3333 3468999
Q ss_pred EEcCCCCCcccccc-----ccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 172 ILGDFSGSHNYSRY-----MGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 172 v~d~~~~~~~~~~~-----~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+||+...+.....+ .... ....+..++++++|.++++...++.+.+|.+
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~--~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFT--GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECC--SSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EEEecCCCcCcccccceEEEecC--CCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 99965332222111 0110 0125788999999998888777787888765
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.24 E-value=1.2e-09 Score=95.15 Aligned_cols=165 Identities=9% Similarity=-0.018 Sum_probs=115.5
Q ss_pred eEEEECCCCCEEE-Eecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee-
Q 040274 52 ILWILPSSGRYMA-VAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML- 106 (359)
Q Consensus 52 ~~l~~spdg~~l~-~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~- 106 (359)
.+++++++|+.++ +... .+.+|++++++.++++.. ++.|.+||..+... ..+.
T Consensus 27 ~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~ 104 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPF 104 (270)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCC
T ss_pred cceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeec
Confidence 6788999998666 4222 567899999988666655 88999999876543 2332
Q ss_pred cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee---cCCceeEEEcCCC-cEEEE-cCCcEEEEcCCCCCcc
Q 040274 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL---TGHAKTLDFSQKG-LLAVG-TGSFAQILGDFSGSHN 181 (359)
Q Consensus 107 ~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~v~~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~ 181 (359)
.....+.+++++|+|.++++...++.|.+||..+....... ...+.+++++++| ++.+. .++.|.+||.... ..
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~ 183 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-NQ 183 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-CE
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-ce
Confidence 33357899999999998888888899999986654433222 1357899999999 55444 4689999995433 22
Q ss_pred ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
....... ...+.+++++++|.++++...++.+.+|.+.
T Consensus 184 ~~~~~~~----~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 184 VVLPFTD----ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EECCCSS----CCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred EeecccC----CCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 1111111 1258899999999777777777777777654
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.23 E-value=3.4e-10 Score=113.04 Aligned_cols=139 Identities=12% Similarity=0.011 Sum_probs=96.6
Q ss_pred eeEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCe------------
Q 040274 70 TDLMRVNPFNGVVSLGHSGG-----TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK------------ 132 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg-----~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~------------ 132 (359)
+..++|||||++|+.++.++ .|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 67899999999998876543 8999999999876543332 23678999999999999887765
Q ss_pred ----EEEEEcCCCee----eEeec---CCceeEEEcCCC--cEEEEc-----CCcEEEEcCCC------CCccccccccc
Q 040274 133 ----IKIWDLRKYEV----LQTLT---GHAKTLDFSQKG--LLAVGT-----GSFAQILGDFS------GSHNYSRYMGN 188 (359)
Q Consensus 133 ----i~vwd~~~~~~----~~~~~---~~v~~~~~s~~g--l~~~~~-----d~~i~v~d~~~------~~~~~~~~~~~ 188 (359)
|++|++.++.. +.... ..+.++.||||| ++.++. +..|.+||+.. +......+..+
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 99999988752 22222 235789999999 444443 56899999654 22123344433
Q ss_pred cCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 189 SMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 189 ~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
.. .+.. .|+|+|+.|+..+..
T Consensus 286 ~~----~~~~-~~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 286 FE----GEYD-YVTNEGTVFTFKTNR 306 (710)
T ss_dssp SS----SCEE-EEEEETTEEEEEECT
T ss_pred CC----cEEE-EEeccCCEEEEEECC
Confidence 22 2333 588999888776653
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.23 E-value=5.9e-10 Score=111.07 Aligned_cols=167 Identities=8% Similarity=-0.049 Sum_probs=114.4
Q ss_pred eEEEECCCCCEEEEecc--------------------------ce--eEEEEcCCCCEEEEEeCCCe-------------
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RT--DLMRVNPFNGVVSLGHSGGT------------- 90 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v--~~l~~sp~~~~l~tg~~dg~------------- 90 (359)
.+++|||||++||.+.. .+ ..++|+|||+.|++++.|..
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCE
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCE
Confidence 67899999999995322 12 68999999999999988776
Q ss_pred EEEEeCCCCcc--eEE--eecCCCCeEEEEEecCCCEEEEecCCC----eEEEEEcCCCeeeEee--cCCceeEEEcCCC
Q 040274 91 VTMWKPTTSAL--LIK--MLYHQGPVSALAFHPNGHLMATTGKEC----KIKIWDLRKYEVLQTL--TGHAKTLDFSQKG 160 (359)
Q Consensus 91 v~lwd~~~~~~--~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d~----~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g 160 (359)
|++|++.++.. ... ...|...+.++.|+|||++|+.++.++ .|++||..++...... ...+....| ++|
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETT
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCC
Confidence 99999998763 222 234556789999999999988877665 6777776555432222 334555556 555
Q ss_pred -cEEEEc----CCcEEEEcCCCCCc-cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 161 -LLAVGT----GSFAQILGDFSGSH-NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 161 -l~~~~~----d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
++..+. ++.|.+||+..... ....+..+. ....+.+++|+ ++.+++++..++...||+.
T Consensus 283 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 283 RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED--SSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC--SSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC--CCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 444443 47899999755421 112232221 13357888888 6778888888988877653
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.23 E-value=1.2e-09 Score=98.66 Aligned_cols=153 Identities=12% Similarity=0.074 Sum_probs=107.9
Q ss_pred ceeEEEEcCCCCEEEEEeCC------------------------CeEEEEeCCCCcceEEee-cCCCCeEEEEEecCCCE
Q 040274 69 RTDLMRVNPFNGVVSLGHSG------------------------GTVTMWKPTTSALLIKML-YHQGPVSALAFHPNGHL 123 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~d------------------------g~v~lwd~~~~~~~~~~~-~h~~~v~~l~~~p~g~~ 123 (359)
.+.+++++|+|.++++.+.+ +.|.+||..+++.+..+. ++.....+++++|+|++
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 46677777777766666655 579999999888776554 34457899999999999
Q ss_pred EEEecCCCeEEEEEcCCCe-eeEeec------------CCceeEEEcC-CC-cEEEE--cCCcEEEEcCCCCCccccccc
Q 040274 124 MATTGKECKIKIWDLRKYE-VLQTLT------------GHAKTLDFSQ-KG-LLAVG--TGSFAQILGDFSGSHNYSRYM 186 (359)
Q Consensus 124 l~s~~~d~~i~vwd~~~~~-~~~~~~------------~~v~~~~~s~-~g-l~~~~--~d~~i~v~d~~~~~~~~~~~~ 186 (359)
+++...++.|++||..... .+..+. ..+..++++| +| ++.+. .++.|.+|| ..+ .....+.
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g-~~~~~~~ 182 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG-KFVTQWG 182 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS-CEEEEEC
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC-CEEEEec
Confidence 9998889999999986432 455541 1468999999 77 54444 478999999 333 3333332
Q ss_pred cccC------CCCcceeEEEEccC-CCEEEEEeCCCeEEEEEcC
Q 040274 187 GNSM------VKGYQIGKVSFRPY-EDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 187 ~~~~------~~~~~v~~~~~sp~-~~~l~~g~~dg~~~i~~~g 223 (359)
.... ..-.....++|+|+ +.++++...++.+.+|.+.
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 1110 01123789999998 7777777788888888765
No 184
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=1.2e-10 Score=106.95 Aligned_cols=141 Identities=9% Similarity=0.004 Sum_probs=106.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----------ceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEE
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA-----------LLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWD 137 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~-----------~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd 137 (359)
.++.+++++...++++|+.++ +.+|++.+.. +.... .+.+ |+.++| ++.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 589999999999999999885 4559865332 22222 4566 999999 89999998 889999999
Q ss_pred cCCCee---eEeecCCceeEEEcCCCcEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 138 LRKYEV---LQTLTGHAKTLDFSQKGLLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 138 ~~~~~~---~~~~~~~v~~~~~s~~gl~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
+++... +..+...+.++.+.+..+++++.||.|.+||+..... . . +. ..|+|++|||+| +++|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~-~-~---~~----~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST-K-Q---LA----QNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE-E-E---EE----ESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcc-c-c---cc----CCceEEEEcCCc--eEEEEcC
Confidence 987543 3344556777777765588889999999999765432 1 1 21 269999999999 7889999
Q ss_pred CeEEEEEcCCCC
Q 040274 215 GWSGILVPRSSE 226 (359)
Q Consensus 215 g~~~i~~~gs~~ 226 (359)
|.+.+|.+....
T Consensus 182 g~i~~~~~~~~~ 193 (388)
T 1xip_A 182 RSFQSFAWRNGE 193 (388)
T ss_dssp SCEEEEEEETTE
T ss_pred CcEEEEcCCCcc
Confidence 999998765443
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.21 E-value=1e-09 Score=97.26 Aligned_cols=146 Identities=13% Similarity=0.075 Sum_probs=109.1
Q ss_pred ceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 69 RTDLMRVNPFNG-VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 69 ~v~~l~~sp~~~-~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
...+++|+|+++ +++++..++.|.+||+.++ ...+..+...+.+++++|+|.++++...++.|.+||..+++.....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 678899999998 7788888999999999977 6666677788999999999999888888899999999877653332
Q ss_pred ---c----CCceeEEEcCCC-cEEEE----c--------------CCcEEEEcCCCCCccccccccccCCCCcceeEEEE
Q 040274 148 ---T----GHAKTLDFSQKG-LLAVG----T--------------GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSF 201 (359)
Q Consensus 148 ---~----~~v~~~~~s~~g-l~~~~----~--------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~ 201 (359)
. ..+.+++++|+| ++++. . .+.|..|+.. + . ...+..+. .....++|
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~-~~~~~~~~----~~~~gi~~ 179 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-T-LSAPIRDR----VKPNGLAF 179 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-C-EEEEECCC----SSEEEEEE
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-C-EEEeecCC----CCCccEEE
Confidence 1 246789999999 55531 1 3466677633 2 2 22222222 25789999
Q ss_pred ccCCCEEEEEeCCCeEEEEEcC
Q 040274 202 RPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 202 sp~~~~l~~g~~dg~~~i~~~g 223 (359)
+|+|+.|++.+.++.+.+|...
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEeCCCCeEEEEEEC
Confidence 9999999777777888777654
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.14 E-value=7.1e-10 Score=110.47 Aligned_cols=133 Identities=9% Similarity=-0.069 Sum_probs=87.8
Q ss_pred eeEEEEcCCCCEEEEE-----eCCCeEEEEeCCCCcceEEeecCCCCe--EEEEEecCCCEEEEecCCCe----------
Q 040274 70 TDLMRVNPFNGVVSLG-----HSGGTVTMWKPTTSALLIKMLYHQGPV--SALAFHPNGHLMATTGKECK---------- 132 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg-----~~dg~v~lwd~~~~~~~~~~~~h~~~v--~~l~~~p~g~~l~s~~~d~~---------- 132 (359)
+.+++|||||++|+.+ +.+..|++||+.+++.+. ..+...+ .+++|+|||+.|+.++.|..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 7789999999998844 334689999999987651 1122222 68999999999999988776
Q ss_pred ---EEEEEcCCCe----eeEeec---CCceeEEEcCCC--cEEEEcCC----cEEEEcCCCCCccccccccccCCCCcce
Q 040274 133 ---IKIWDLRKYE----VLQTLT---GHAKTLDFSQKG--LLAVGTGS----FAQILGDFSGSHNYSRYMGNSMVKGYQI 196 (359)
Q Consensus 133 ---i~vwd~~~~~----~~~~~~---~~v~~~~~s~~g--l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~v 196 (359)
|++|++.++. ++.... ..+.++.||||| ++.++.++ .|.+|+...+ ....+..+.. .+
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~----~~ 274 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--DFRLLVKGVG----AK 274 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--SCEEEEECSS----CC
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--ceEEeecCCC----ce
Confidence 9999998875 333322 346789999999 55555444 6677763222 2333333321 34
Q ss_pred eEEEEccCCCEEEEEe
Q 040274 197 GKVSFRPYEDVLGIGH 212 (359)
Q Consensus 197 ~~~~~sp~~~~l~~g~ 212 (359)
....| |+|. |+..+
T Consensus 275 ~~~~~-~~g~-l~~~s 288 (695)
T 2bkl_A 275 YEVHA-WKDR-FYVLT 288 (695)
T ss_dssp EEEEE-ETTE-EEEEE
T ss_pred EEEEe-cCCc-EEEEE
Confidence 55555 5666 44444
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.12 E-value=1.6e-09 Score=98.05 Aligned_cols=135 Identities=10% Similarity=0.069 Sum_probs=91.1
Q ss_pred ceeEEEEcCCCCEEEEEeCC---C--eEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCC-------------
Q 040274 69 RTDLMRVNPFNGVVSLGHSG---G--TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE------------- 130 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~d---g--~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d------------- 130 (359)
.+.+++|||+|+.|++++.+ + .|.+|++.+++....... .. +.+++|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 46779999999998887754 3 488888888776554433 34 9999999999998887642
Q ss_pred --------------CeEEEEEcCCCeeeEee--cCCceeEEEcCCC-cEEEEcC------C-cEEEEcCCCCCccccccc
Q 040274 131 --------------CKIKIWDLRKYEVLQTL--TGHAKTLDFSQKG-LLAVGTG------S-FAQILGDFSGSHNYSRYM 186 (359)
Q Consensus 131 --------------~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~g-l~~~~~d------~-~i~v~d~~~~~~~~~~~~ 186 (359)
..|++||+.+++.+..+ . .+..++|+|+| +++++.+ . ...||.+. .+. ...+.
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~ 214 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMF 214 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeC-CCc-eEEec
Confidence 57999999988763333 4 78899999999 3344333 1 33444432 222 22222
Q ss_pred cccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 187 GNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 187 ~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
.+ . .+.++ +|+|++|+.++.++
T Consensus 215 ~~-~----~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 215 EK-V----SFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EE-E----SEEEE--EECSSCEEEEECCS
T ss_pred cC-c----ceeeE--CCCCCEEEEEEccc
Confidence 22 2 34444 99999988777543
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.11 E-value=1.1e-08 Score=90.03 Aligned_cols=158 Identities=12% Similarity=0.085 Sum_probs=115.6
Q ss_pred eEEEECCCCCEEEEecc---------------------ceeEEEEcCCCCEEEEEeC-CCeEEEEeCCCCcceEEeec--
Q 040274 52 ILWILPSSGRYMAVAGR---------------------RTDLMRVNPFNGVVSLGHS-GGTVTMWKPTTSALLIKMLY-- 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------~v~~l~~sp~~~~l~tg~~-dg~v~lwd~~~~~~~~~~~~-- 107 (359)
.++.++|+|++|++... .+.++.+.|+|.++++.+. ++.|..+|. +++.+..+..
T Consensus 40 ~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~ 118 (276)
T 3no2_A 40 NSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET 118 (276)
T ss_dssp CEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC
T ss_pred cCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC
Confidence 67788888888885432 4567888999999999887 788888886 5776666542
Q ss_pred ----CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec--CCceeEEEcCCC-cE-EEEcCCcEEEEcCCCCC
Q 040274 108 ----HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT--GHAKTLDFSQKG-LL-AVGTGSFAQILGDFSGS 179 (359)
Q Consensus 108 ----h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~v~~~~~s~~g-l~-~~~~d~~i~v~d~~~~~ 179 (359)
+......+++.++|+++++.+.++.|.+||.. |+.+.++. ..+.++.+.++| ++ +++.++.|..||..++
T Consensus 119 ~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG- 196 (276)
T 3no2_A 119 GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN- 196 (276)
T ss_dssp SCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC-
T ss_pred CCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC-
Confidence 22345567789999999999999999999998 99988884 457788889998 44 4445568999995544
Q ss_pred ccccccccccC--CCCcceeEEEEccCCCEEEEEe
Q 040274 180 HNYSRYMGNSM--VKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 180 ~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
..+-.+..... ..-..+..+...++|.++++.+
T Consensus 197 ~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 197 RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred cEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 44444432211 0112478899999999888874
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.10 E-value=4.2e-08 Score=86.26 Aligned_cols=172 Identities=9% Similarity=0.018 Sum_probs=119.9
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEE-eec
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIK-MLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~-~~~ 107 (359)
.+++++++|..+++... .+.+++++|++.++++...++.|.+||+ ++..... +..
T Consensus 60 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~ 138 (299)
T 2z2n_A 60 MCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPN 138 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred eeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCC
Confidence 67777777776665432 4678899999988887777889999998 5543322 223
Q ss_pred CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe-ec---CCceeEEEcCCC-cEEEE-cCCcEEEEcCCCCCcc
Q 040274 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT-LT---GHAKTLDFSQKG-LLAVG-TGSFAQILGDFSGSHN 181 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~-~~---~~v~~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~ 181 (359)
+...+.+++++++|.++++...++.|.+||. +++.... +. ..+.+++++++| ++.+. .++.|.+||. .+ ..
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~~ 215 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG-EI 215 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-CE
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC-cE
Confidence 4567899999999998888877889999999 6655432 22 346789999999 55555 4688999996 43 22
Q ss_pred ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCCCceeeec
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSEPNFDSWV 233 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~~~~~~~ 233 (359)
..+... . ....+.+++++++|.++++...++.+.+|.+ ++.+..+.
T Consensus 216 -~~~~~~-~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~---~g~~~~~~ 261 (299)
T 2z2n_A 216 -TEFKIP-T-PNARPHAITAGAGIDLWFTEWGANKIGRLTS---NNIIEEYP 261 (299)
T ss_dssp -EEEECS-S-TTCCEEEEEECSTTCEEEEETTTTEEEEEET---TTEEEEEE
T ss_pred -EEEECC-C-CCCCceeEEECCCCCEEEeccCCceEEEECC---CCceEEEe
Confidence 222111 1 2236899999999997776667788888876 23455443
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.09 E-value=4.7e-09 Score=105.29 Aligned_cols=164 Identities=10% Similarity=-0.009 Sum_probs=108.9
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCCCe--------------
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSGGT-------------- 90 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~dg~-------------- 90 (359)
.+++|||||++|+++.. .+..++|+|| +.|+.++.++.
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCE
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCE
Confidence 57899999999998643 2267899999 98888887654
Q ss_pred EEEEeCCCCcc--eEEee--cCCCCeEEEEEecCCCEEEEecCCC-----eEEEEEcCCC--eeeEee---cCCceeEEE
Q 040274 91 VTMWKPTTSAL--LIKML--YHQGPVSALAFHPNGHLMATTGKEC-----KIKIWDLRKY--EVLQTL---TGHAKTLDF 156 (359)
Q Consensus 91 v~lwd~~~~~~--~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~-----~i~vwd~~~~--~~~~~~---~~~v~~~~~ 156 (359)
|++|++.++.. ...+. .+...+.++.|+|||++|+.++.++ .|++||+.++ .+...+ ...+... +
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~ 323 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-V 323 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-E
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-E
Confidence 89999987753 22332 2334588999999999988776543 8999999876 313334 2223333 3
Q ss_pred cCCC--cEEEEcC----CcEEEEcCCCCC-ccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 157 SQKG--LLAVGTG----SFAQILGDFSGS-HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 157 s~~g--l~~~~~d----~~i~v~d~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+|+| ++..+.+ +.|.+||+.... .....+..+ ...+.++.|+ ++.++++...++...||+.
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~----~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES----KDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC----SSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC----CCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 5777 5555543 459999965431 222222222 2246677777 5567778888888777643
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.08 E-value=1e-08 Score=90.28 Aligned_cols=161 Identities=12% Similarity=0.033 Sum_probs=119.2
Q ss_pred EECC-CCCEEEEecc----ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC-CCeEEEEEecCCCEEEEec
Q 040274 55 ILPS-SGRYMAVAGR----RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ-GPVSALAFHPNGHLMATTG 128 (359)
Q Consensus 55 ~~sp-dg~~l~~~~~----~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-~~v~~l~~~p~g~~l~s~~ 128 (359)
.|++ +|+.+-.-.. .++++.++|+|++|+ +.++.|..||+ +++.+..+..+. ..+.++.+.|+|+++++.+
T Consensus 19 ~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 19 IINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEec
Confidence 4555 6665543221 488999999999888 45788999999 899999888653 5788999999999999988
Q ss_pred C-CCeEEEEEcCCCeeeEeec------C---CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcce
Q 040274 129 K-ECKIKIWDLRKYEVLQTLT------G---HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQI 196 (359)
Q Consensus 129 ~-d~~i~vwd~~~~~~~~~~~------~---~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v 196 (359)
. ++.|..+|. +++.+..+. . ....+++.++| +++...++.|.+||.. + +.+-.+.... .+
T Consensus 96 ~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G-~~~w~~~~~~-----~~ 167 (276)
T 3no2_A 96 GHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G-QLLNSVKLSG-----TP 167 (276)
T ss_dssp STTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S-CEEEEEECSS-----CC
T ss_pred CCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C-CEEEEEECCC-----Cc
Confidence 7 788888886 677776662 1 23567788999 5555567999999954 4 5555554432 45
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 197 GKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 197 ~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
.++.+.++|+++++++.++.+..+.+.++.
T Consensus 168 ~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 168 FSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp CEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred cceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 677889999999999988877777665443
No 192
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=7.1e-09 Score=92.43 Aligned_cols=158 Identities=13% Similarity=0.102 Sum_probs=110.3
Q ss_pred eEEEECCCCCEEEEecc--------------------------ceeEEEEcCCCCEEEE----EeC-------------C
Q 040274 52 ILWILPSSGRYMAVAGR--------------------------RTDLMRVNPFNGVVSL----GHS-------------G 88 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~--------------------------~v~~l~~sp~~~~l~t----g~~-------------d 88 (359)
..+.++++|+++++... .++.++++|+|.++++ |.. .
T Consensus 89 ~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 89 NGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred ceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 77889999987766422 3567999999988876 332 2
Q ss_pred CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCC------CeEEEEEcCCCee--eEee----cCCceeEEE
Q 040274 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE------CKIKIWDLRKYEV--LQTL----TGHAKTLDF 156 (359)
Q Consensus 89 g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d------~~i~vwd~~~~~~--~~~~----~~~v~~~~~ 156 (359)
+.|..||+.+++..... +....+.++|+|+++.|+.+... +.|.+||+..+.. ...+ .+.+..+++
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~ 246 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV 246 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE
T ss_pred CeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE
Confidence 56888888777654433 44567899999999987777665 7899999876431 1111 244678999
Q ss_pred cCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEE
Q 040274 157 SQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGI 219 (359)
Q Consensus 157 s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i 219 (359)
+++| +++++ .+.|.+|+. .+ .....+..+. .+.+++|+|+++.|.+++.++..++
T Consensus 247 d~~G~lwv~~-~~gv~~~~~-~g-~~~~~~~~~~-----~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 247 DRGGWLWSSS-GTGVCVFDS-DG-QLLGHIPTPG-----TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CTTSCEEECC-SSEEEEECT-TS-CEEEEEECSS-----CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCCCEEEec-CCcEEEECC-CC-CEEEEEECCC-----ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 9999 65555 445999995 33 3444443332 4888999999999998888776555
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.08 E-value=9.5e-09 Score=99.53 Aligned_cols=151 Identities=7% Similarity=-0.034 Sum_probs=110.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCC--CCcceEEeecCCCCeEEEEEe----cCCCEEEEecC-CCeEEEEEcCCC
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPT--TSALLIKMLYHQGPVSALAFH----PNGHLMATTGK-ECKIKIWDLRKY 141 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~--~~~~~~~~~~h~~~v~~l~~~----p~g~~l~s~~~-d~~i~vwd~~~~ 141 (359)
.+.++.|+|+++++++++.|+.|.+||+. +++.+..+..... ...++|+ |||+++++++. +++|.+||..++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 57899999999999999999999999996 7777777765443 5789999 69998877765 589999999999
Q ss_pred eeeEeec--C------------CceeEEEcCCC---cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccC
Q 040274 142 EVLQTLT--G------------HAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY 204 (359)
Q Consensus 142 ~~~~~~~--~------------~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 204 (359)
+++..+. + .+..+..++++ +++...+|.|.++|............. .+....++.|+|+
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~----~~~~~~d~~~~pd 352 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS----AERFLHDGGLDGS 352 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE----CCSSEEEEEECTT
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee----ccccccCceECCC
Confidence 8887762 1 34677888887 444445689999996443211111111 1224678899999
Q ss_pred CCEEEEEe-CCCeEEEEEcCC
Q 040274 205 EDVLGIGH-SMGWSGILVPRS 224 (359)
Q Consensus 205 ~~~l~~g~-~dg~~~i~~~gs 224 (359)
|+++++++ .++.+.++...+
T Consensus 353 gr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTT
T ss_pred CCEEEEEeCCCCeEEEEECCC
Confidence 99987766 466666665543
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.07 E-value=4.3e-08 Score=86.18 Aligned_cols=163 Identities=7% Similarity=-0.001 Sum_probs=115.3
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee--
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML-- 106 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~-- 106 (359)
.+++++++|+.+++... .+.++++++++.++++...++.|..||.. +. ...+.
T Consensus 18 ~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~ 95 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLP 95 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECS
T ss_pred cceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCC
Confidence 67778888876665431 47789999999888877778899999986 33 22232
Q ss_pred cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe-ec---CCceeEEEcCCC-cEEEEc-CCcEEEEcCCCCCc
Q 040274 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT-LT---GHAKTLDFSQKG-LLAVGT-GSFAQILGDFSGSH 180 (359)
Q Consensus 107 ~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~-~~---~~v~~~~~s~~g-l~~~~~-d~~i~v~d~~~~~~ 180 (359)
.+...+.+++++|+|.++++...++.|.+||. ++..... .. ..+.+++++++| ++.+.. ++.|.+||. .+ .
T Consensus 96 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~ 172 (299)
T 2z2n_A 96 NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SG-D 172 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC-C
T ss_pred CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC-c
Confidence 24557899999999998888878899999998 5544322 22 347899999999 555554 578999996 33 2
Q ss_pred cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 181 NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 181 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
.. .+.... ....+.+++++++|.++++...++.+.++.+
T Consensus 173 ~~-~~~~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 173 IT-EFKIPT--PASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EE-EEECSS--TTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EE-EeeCCC--CCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 22 121111 1235889999999997777766777777766
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=3.9e-08 Score=87.27 Aligned_cols=155 Identities=14% Similarity=0.136 Sum_probs=102.3
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeC-----------CCeEEEEe
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHS-----------GGTVTMWK 95 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~-----------dg~v~lwd 95 (359)
.+++++|+|+++++... .++.++++|+|.++++... .+.|..++
T Consensus 57 ~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 57 SSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 78889999996665443 3677899999986665432 23444444
Q ss_pred CCCCcceEEeecCCCCeEEEEEecCCCEEE-EecCCCeEEEEEcC--CCee-----eEee---cCCceeEEEcCCC-cEE
Q 040274 96 PTTSALLIKMLYHQGPVSALAFHPNGHLMA-TTGKECKIKIWDLR--KYEV-----LQTL---TGHAKTLDFSQKG-LLA 163 (359)
Q Consensus 96 ~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~-s~~~d~~i~vwd~~--~~~~-----~~~~---~~~v~~~~~s~~g-l~~ 163 (359)
.. +. +..+..+....+.++|+|+++.|+ +.+.++.|.+||+. ++.. +..+ .+.+..++++++| +++
T Consensus 137 ~~-g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 137 PD-HH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV 214 (297)
T ss_dssp TT-SC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE
T ss_pred CC-CC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE
Confidence 43 33 333334445578999999998664 55567899999973 4432 2222 2356889999999 554
Q ss_pred EE-cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEc-cCCCEEEEEeC
Q 040274 164 VG-TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFR-PYEDVLGIGHS 213 (359)
Q Consensus 164 ~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~g~~ 213 (359)
+. .++.|.+||..++ .....+..+. ..+++++|. |+++.|++++.
T Consensus 215 a~~~~~~v~~~d~~tG-~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTG-KRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEETTTEEEEECTTTC-CEEEEEECSS----SBEEEEEEESGGGCEEEEEEB
T ss_pred EEcCCCEEEEEcCCCc-eEEEEEECCC----CCceEEEEeCCCCCEEEEEcC
Confidence 44 4678999995434 4444444332 268999998 89887766554
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.02 E-value=2.8e-08 Score=89.65 Aligned_cols=145 Identities=8% Similarity=0.025 Sum_probs=98.1
Q ss_pred EEEEcCCCCEEEEEe--CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCC----------CeEEEEEcC
Q 040274 72 LMRVNPFNGVVSLGH--SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE----------CKIKIWDLR 139 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~--~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d----------~~i~vwd~~ 139 (359)
.|++ ++..+++++ .++.|.+||+.+++.+..+... .....+.++|+|++++++..+ +.|.+||..
T Consensus 135 ~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 135 QMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred eEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 4455 344455554 4889999999999887777643 345788999999988777655 789999999
Q ss_pred CCeeeEeec----CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccC-CCEEEEE--
Q 040274 140 KYEVLQTLT----GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPY-EDVLGIG-- 211 (359)
Q Consensus 140 ~~~~~~~~~----~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~g-- 211 (359)
+++.+..+. ..+..++|+|++ .+.++.. .|.+||+.+.......+... .+.....++++|+ +.++++.
T Consensus 212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~---~~~~p~gi~vdp~~g~lyva~~~ 287 (328)
T 3dsm_A 212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEF---RDTKYYGLTVNPNNGEVYVADAI 287 (328)
T ss_dssp TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCC---CSSCEEEEEECTTTCCEEEEECT
T ss_pred CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecC---CCCceEEEEEcCCCCeEEEEccc
Confidence 998876663 257999999988 4434433 89999965442211111111 1236889999995 5555554
Q ss_pred --eCCCeEEEEEcC
Q 040274 212 --HSMGWSGILVPR 223 (359)
Q Consensus 212 --~~dg~~~i~~~g 223 (359)
..++.+.+|.+.
T Consensus 288 ~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 288 DYQQQGIVYRYSPQ 301 (328)
T ss_dssp TSSSEEEEEEECTT
T ss_pred ccccCCEEEEECCC
Confidence 456667776654
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.99 E-value=9.4e-08 Score=84.85 Aligned_cols=147 Identities=12% Similarity=0.112 Sum_probs=97.9
Q ss_pred eeEEEEcCCCCEEEEEeCC---------------CeEEEEeCCCCcceEEeecCCCCeEEEEEe----cCCCEEE-EecC
Q 040274 70 TDLMRVNPFNGVVSLGHSG---------------GTVTMWKPTTSALLIKMLYHQGPVSALAFH----PNGHLMA-TTGK 129 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~d---------------g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~----p~g~~l~-s~~~ 129 (359)
+.+++++|+|.++++...+ +.|..|+.. ++... +..+......++|+ |++..|+ +...
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~ 196 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETP 196 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECC
Confidence 5688999999887776655 578888876 54333 33344557899999 9996554 4456
Q ss_pred CCeEEEEEcC-CCe-----eeEeec----CCceeEEEcCCC-cEEE-EcCCcEEEEcCCCCCccccccccccCCCCccee
Q 040274 130 ECKIKIWDLR-KYE-----VLQTLT----GHAKTLDFSQKG-LLAV-GTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIG 197 (359)
Q Consensus 130 d~~i~vwd~~-~~~-----~~~~~~----~~v~~~~~s~~g-l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~ 197 (359)
++.|.+||+. ++. ....+. +.+..++++++| ++++ ..++.|.+||..++ .....+..+ ...+.
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g-~~~~~~~~~----~~~~~ 271 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG-QPKMRIRCP----FEKPS 271 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB-SCSEEEECS----SSCEE
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC-cEeEEEeCC----CCCce
Confidence 8899999986 443 222333 447889999999 4444 46789999995433 333333322 23689
Q ss_pred EEEEccCCCEEEEEe-CCCeEEEEEcC
Q 040274 198 KVSFRPYEDVLGIGH-SMGWSGILVPR 223 (359)
Q Consensus 198 ~~~~sp~~~~l~~g~-~dg~~~i~~~g 223 (359)
+++|+|+|..|.+++ .++.+..|...
T Consensus 272 ~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 272 NLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred eEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 999999999665554 45555555543
No 198
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.97 E-value=8.3e-09 Score=94.70 Aligned_cols=140 Identities=17% Similarity=0.138 Sum_probs=91.2
Q ss_pred ceeEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCcceEEeecC--CCCeEEEEEecCCCEEEEecCC-----CeEE
Q 040274 69 RTDLMRVNP-FNGVVSLGHSG------GTVTMWKPTTSALLIKMLYH--QGPVSALAFHPNGHLMATTGKE-----CKIK 134 (359)
Q Consensus 69 ~v~~l~~sp-~~~~l~tg~~d------g~v~lwd~~~~~~~~~~~~h--~~~v~~l~~~p~g~~l~s~~~d-----~~i~ 134 (359)
.+..+.|+| ++..|+.++.+ ..|.+||+.++... .+..+ ...+..++|+|+|++|+.++.+ +.|+
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 678899999 78877776543 36888898765533 33333 2357889999999987776543 4599
Q ss_pred EEEcCCCeeeEee--cCCceeEEEcC-CC-cEEE-E----------------cCCcEEEEcCCCCCccccccccccCCC-
Q 040274 135 IWDLRKYEVLQTL--TGHAKTLDFSQ-KG-LLAV-G----------------TGSFAQILGDFSGSHNYSRYMGNSMVK- 192 (359)
Q Consensus 135 vwd~~~~~~~~~~--~~~v~~~~~s~-~g-l~~~-~----------------~d~~i~v~d~~~~~~~~~~~~~~~~~~- 192 (359)
+||+.+++..... .+ .. +.|+| +| +++. + .+..|++||+..+ .. ..+..+....
T Consensus 268 ~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~-~~-~~l~~~~~~~~ 343 (396)
T 3c5m_A 268 KANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK-SA-QKLCKHSTSWD 343 (396)
T ss_dssp EECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT-BC-CEEEECCCCCC
T ss_pred EEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC-ce-EEccCCCCccc
Confidence 9999887653322 32 23 89999 99 4433 2 2368999996544 22 2333331100
Q ss_pred ------CcceeEEEEccCCCEEEEEeC
Q 040274 193 ------GYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 193 ------~~~v~~~~~sp~~~~l~~g~~ 213 (359)
...+.+++|+|+|+.|+.++.
T Consensus 344 ~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 344 VLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cccccccCCCCCceEccCCCeEEEEec
Confidence 002566899999998887765
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.96 E-value=4.6e-08 Score=88.16 Aligned_cols=150 Identities=9% Similarity=-0.034 Sum_probs=104.3
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCC-----CCeEEEEEecCCCEEEEec-CCCeEEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ-----GPVSALAFHPNGHLMATTG-KECKIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-----~~v~~l~~~p~g~~l~s~~-~d~~i~vwd~~~~~ 142 (359)
....+++++++.++++...++.|.+||+.+++....+.... .....+++ .++.++++.. .++.|.+||+.+++
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 67889998988544444488999999999998776665433 14456777 4454444443 48899999999998
Q ss_pred eeEeec--CCceeEEEcCCC-cEEEEcC-----------CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEE
Q 040274 143 VLQTLT--GHAKTLDFSQKG-LLAVGTG-----------SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVL 208 (359)
Q Consensus 143 ~~~~~~--~~v~~~~~s~~g-l~~~~~d-----------~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 208 (359)
.+..+. ..+..+.++|+| ++.++.+ +.|.+||..+. .....+... .+.....++|+|+++.|
T Consensus 164 ~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~~~~~~~---~g~~p~~la~~~d~~~l 239 (328)
T 3dsm_A 164 VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF-TVEKQFKFK---LGDWPSEVQLNGTRDTL 239 (328)
T ss_dssp EEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT-EEEEEEECC---TTCCCEEEEECTTSCEE
T ss_pred EEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC-eEEEEEecC---CCCCceeEEEecCCCEE
Confidence 887773 446889999999 5555543 68999996543 333333221 12358899999999998
Q ss_pred EEEeCCCeEEEEEcCCC
Q 040274 209 GIGHSMGWSGILVPRSS 225 (359)
Q Consensus 209 ~~g~~dg~~~i~~~gs~ 225 (359)
+++.. .+.+|...++
T Consensus 240 yv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 240 YWINN--DIWRMPVEAD 254 (328)
T ss_dssp EEESS--SEEEEETTCS
T ss_pred EEEcc--EEEEEECCCC
Confidence 88765 5566665443
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.96 E-value=2.3e-08 Score=91.52 Aligned_cols=135 Identities=10% Similarity=0.069 Sum_probs=92.2
Q ss_pred CCCEEEEEe------CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec----------CCCeEEEEEcCCC
Q 040274 78 FNGVVSLGH------SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG----------KECKIKIWDLRKY 141 (359)
Q Consensus 78 ~~~~l~tg~------~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~----------~d~~i~vwd~~~~ 141 (359)
++.++++.. .|+.|.+||..+++.+..+..+..+ .++|+|||+++++++ .++.|.+||+.++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 555555543 3789999999999988888776655 899999999998886 3678999999998
Q ss_pred eeeEeec---------CCceeEEEcCCC--cEEEEc--CCcEEEEcCCCCCccccc-cccccCCCCcceeEEEEccCC-C
Q 040274 142 EVLQTLT---------GHAKTLDFSQKG--LLAVGT--GSFAQILGDFSGSHNYSR-YMGNSMVKGYQIGKVSFRPYE-D 206 (359)
Q Consensus 142 ~~~~~~~---------~~v~~~~~s~~g--l~~~~~--d~~i~v~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~-~ 206 (359)
+.+.++. ..+..++|+|+| ++++.. ++.|.+||+... ..... +... ....+.+.|++ .
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~-~~~~~~i~~~------~~~~v~~~p~~~~ 164 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG-DYVEDVTAAA------GCWSVIPQPNRPR 164 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT-EEEEEEGGGT------TEEEEEECTTSSS
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC-cEEEEEecCC------CcceeEEcCCCCe
Confidence 8887773 246789999999 444443 578999997654 33333 3221 12223445544 3
Q ss_pred EEEEEeCCCeEEEEE
Q 040274 207 VLGIGHSMGWSGILV 221 (359)
Q Consensus 207 ~l~~g~~dg~~~i~~ 221 (359)
.+++.+.||.+.++.
T Consensus 165 ~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 165 SFMTICGDGGLLTIN 179 (361)
T ss_dssp EEEEEETTSSEEEEE
T ss_pred eEEEECCCCcEEEEE
Confidence 444555555544443
No 201
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.94 E-value=1.9e-08 Score=92.07 Aligned_cols=154 Identities=7% Similarity=-0.056 Sum_probs=106.8
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCCcceEEeecC------CCCeEEEEEecCCCEEEEecC--CCeE
Q 040274 72 LMRVNPFNGVVSLGH----------SGGTVTMWKPTTSALLIKMLYH------QGPVSALAFHPNGHLMATTGK--ECKI 133 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~----------~dg~v~lwd~~~~~~~~~~~~h------~~~v~~l~~~p~g~~l~s~~~--d~~i 133 (359)
.++|+|+++++++++ .+++|.+||+.+.+.+..+..+ ......++|+|+|++|++++. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998886 2678999999998888777532 345678999999999988864 6899
Q ss_pred EEEEcCCCeeeEe-ecC-CceeEEEcCCC---cEEEEcCCcEEEEcCCCCCcccccccc-ccCCCCcceeEEEEccCCCE
Q 040274 134 KIWDLRKYEVLQT-LTG-HAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRYMG-NSMVKGYQIGKVSFRPYEDV 207 (359)
Q Consensus 134 ~vwd~~~~~~~~~-~~~-~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~ 207 (359)
.+||+.+++.+.. +.. ....+.+.|++ +++.+.||.+.+|+....+........ ...........+.++|++..
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999999998888 632 23335677876 778888999998886443332211000 00000011223345678877
Q ss_pred EEEEeCCCeEEEEEcCCC
Q 040274 208 LGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 208 l~~g~~dg~~~i~~~gs~ 225 (359)
++..+.++.+.++...++
T Consensus 214 ~~~~~~~~~v~v~d~~~~ 231 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGD 231 (361)
T ss_dssp EEEEBTTSEEEEEECSSS
T ss_pred EEEEeCCCeEEEEEecCC
Confidence 777778888777776543
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.93 E-value=4.4e-07 Score=79.64 Aligned_cols=164 Identities=9% Similarity=0.011 Sum_probs=113.5
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEE-eec
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIK-MLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~-~~~ 107 (359)
.+++++++|+..++... .+.++++++++.++++...++.|..||.. +..... +..
T Consensus 65 ~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~ 143 (300)
T 2qc5_A 65 MCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPN 143 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred eeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCC
Confidence 66677777776655431 47788999999888877778899999987 554322 223
Q ss_pred CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe-ec---CCceeEEEcCCC-cEEEEc-CCcEEEEcCCCCCcc
Q 040274 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT-LT---GHAKTLDFSQKG-LLAVGT-GSFAQILGDFSGSHN 181 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~-~~---~~v~~~~~s~~g-l~~~~~-d~~i~v~d~~~~~~~ 181 (359)
....+.+++++++|+++++...++.|.+||. ++..... .. ..+.+++++++| ++.+.. .+.|.+||. .+ ..
T Consensus 144 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g-~~ 220 (300)
T 2qc5_A 144 KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG-EI 220 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-CE
T ss_pred CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC-cE
Confidence 4567899999999998777777889999998 5554332 11 246889999999 555554 567999995 33 22
Q ss_pred ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
.. +.... ....+.+++++++|.++++...++.+..+.+
T Consensus 221 ~~-~~~~~--~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 221 SE-YDIPT--PNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EE-EECSS--TTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred EE-EECCC--CCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 11 11111 2235889999999997777666777777765
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.91 E-value=5.1e-07 Score=79.23 Aligned_cols=164 Identities=7% Similarity=-0.026 Sum_probs=115.2
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceE-Eeec
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLI-KMLY 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~-~~~~ 107 (359)
.++.++++|+..++... .+.+|++++++.++++...++.|.+||.. +.... .+..
T Consensus 23 ~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~ 101 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ 101 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred ceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC
Confidence 67778888876665431 46788899999887777678899999988 55432 2222
Q ss_pred CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeE-eec---CCceeEEEcCCC-cEEEEc-CCcEEEEcCCCCCcc
Q 040274 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQ-TLT---GHAKTLDFSQKG-LLAVGT-GSFAQILGDFSGSHN 181 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~-~~~---~~v~~~~~s~~g-l~~~~~-d~~i~v~d~~~~~~~ 181 (359)
....+.+++++++|.++++...++.|..||.. ++... .+. ..+.+++++++| ++.+.. ++.|.+||. .+ ..
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g-~~ 178 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TG-KL 178 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-CE
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CC-cE
Confidence 34678999999999988888778899999987 55432 222 357899999999 555554 678999985 33 22
Q ss_pred ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 182 YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 182 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
. .+... . ....+.+++++++|.++++....+.+.++.+
T Consensus 179 ~-~~~~~-~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 179 E-EYPLP-T-NAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp E-EEECS-S-TTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred E-EeeCC-C-CCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 2 12111 1 2235889999999987777766777777665
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.89 E-value=2.1e-07 Score=83.77 Aligned_cols=154 Identities=14% Similarity=0.120 Sum_probs=101.5
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCCCCEEEEEeC------CCeEEEEeCCCCc
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPFNGVVSLGHS------GGTVTMWKPTTSA 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~~~~l~tg~~------dg~v~lwd~~~~~ 100 (359)
.++.++|+|+++++... .+++++++|+|.++++... .+.|..++ +++
T Consensus 93 ~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~ 170 (326)
T 2ghs_A 93 SALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK 170 (326)
T ss_dssp EEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE
T ss_pred eEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc
Confidence 67788888887776532 3678899999987665442 24566666 454
Q ss_pred ceEEeecCCCCeEEEEEecCCCEEEEe-cCCCeEEEEEcC--CC-ee-----eEeec---CCceeEEEcCCC-cEEEE-c
Q 040274 101 LLIKMLYHQGPVSALAFHPNGHLMATT-GKECKIKIWDLR--KY-EV-----LQTLT---GHAKTLDFSQKG-LLAVG-T 166 (359)
Q Consensus 101 ~~~~~~~h~~~v~~l~~~p~g~~l~s~-~~d~~i~vwd~~--~~-~~-----~~~~~---~~v~~~~~s~~g-l~~~~-~ 166 (359)
. ..+..+....++++|+|+|+.|+.+ +.++.|.+||+. ++ .. +..+. +.+..++++++| ++++. .
T Consensus 171 ~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 171 V-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp E-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET
T ss_pred E-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC
Confidence 3 3333344567899999999876544 557899999986 55 32 22232 346789999999 55554 4
Q ss_pred CCcEEEEcCCCCCccccccccccCCCCcceeEEEEc-cCCCEEEEEeCC
Q 040274 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFR-PYEDVLGIGHSM 214 (359)
Q Consensus 167 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~g~~d 214 (359)
++.|.+||. .+ .....+..+ ...+++++|+ |+++.|++++..
T Consensus 250 ~~~v~~~d~-~g-~~~~~i~~~----~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 250 EGAVDRYDT-DG-NHIARYEVP----GKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TTEEEEECT-TC-CEEEEEECS----CSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCEEEEECC-CC-CEEEEEECC----CCCcEEEEEecCCCCEEEEEecC
Confidence 578999995 33 333333332 2368999998 888877655543
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.89 E-value=2.3e-07 Score=82.17 Aligned_cols=153 Identities=9% Similarity=-0.030 Sum_probs=96.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec----CCCCeEEEEEecCCCEEEEecC-----------CCeE
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY----HQGPVSALAFHPNGHLMATTGK-----------ECKI 133 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~----h~~~v~~l~~~p~g~~l~s~~~-----------d~~i 133 (359)
.+.+++++|++.++++ . ++.|.+||+.+++....... ....++.++++|+|+++++... .+.|
T Consensus 55 ~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l 132 (297)
T 3g4e_A 55 PVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGAL 132 (297)
T ss_dssp CEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEE
T ss_pred ceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEE
Confidence 6889999999995554 3 56899999988764332221 1234788999999997776532 2345
Q ss_pred EEEEcCCCeeeEee--cCCceeEEEcCCC--c-EEEEcCCcEEEEcCC-CCCccc--cccccccCCCCcceeEEEEccCC
Q 040274 134 KIWDLRKYEVLQTL--TGHAKTLDFSQKG--L-LAVGTGSFAQILGDF-SGSHNY--SRYMGNSMVKGYQIGKVSFRPYE 205 (359)
Q Consensus 134 ~vwd~~~~~~~~~~--~~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~-~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~ 205 (359)
+.+|.. +...... ....+.++|+|+| + ++.+.++.|.+||+. ..+... ..+..... ....+..++++++|
T Consensus 133 ~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 133 YSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEG 210 (297)
T ss_dssp EEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTS
T ss_pred EEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCC
Confidence 555543 3332222 2346889999999 4 334446889999853 222211 11111100 11257889999999
Q ss_pred CEEEEEeCCCeEEEEEcCCC
Q 040274 206 DVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 206 ~~l~~g~~dg~~~i~~~gs~ 225 (359)
.+.++...++.+..|.+.++
T Consensus 211 ~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp CEEEEEETTTEEEEECTTTC
T ss_pred CEEEEEcCCCEEEEEcCCCc
Confidence 88887777787777776544
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.87 E-value=2.6e-07 Score=81.99 Aligned_cols=152 Identities=8% Similarity=-0.049 Sum_probs=98.0
Q ss_pred eeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCcceEE-eec----CCCCeEEEEEecCCCEEEEecCC-------------
Q 040274 70 TDLMRVNPF-NGVVSLGHSGGTVTMWKPTTSALLIK-MLY----HQGPVSALAFHPNGHLMATTGKE------------- 130 (359)
Q Consensus 70 v~~l~~sp~-~~~l~tg~~dg~v~lwd~~~~~~~~~-~~~----h~~~v~~l~~~p~g~~l~s~~~d------------- 130 (359)
+.+++++++ +.++++ +..+.|.+||+. ++.... ... +...+++++++|+|+++++...+
T Consensus 73 ~~~i~~~~~~g~l~v~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 150 (314)
T 1pjx_A 73 PAGCQCDRDANQLFVA-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp EEEEEECSSSSEEEEE-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred CceEEEecCCCcEEEE-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccC
Confidence 567889998 654444 444579999988 654322 211 12357899999999988887665
Q ss_pred --CeEEEEEcCCCeeeEee--cCCceeEEEc----CCC--cEEEE-cCCcEEEEcCCCCCccc--cccccccCCCC-cce
Q 040274 131 --CKIKIWDLRKYEVLQTL--TGHAKTLDFS----QKG--LLAVG-TGSFAQILGDFSGSHNY--SRYMGNSMVKG-YQI 196 (359)
Q Consensus 131 --~~i~vwd~~~~~~~~~~--~~~v~~~~~s----~~g--l~~~~-~d~~i~v~d~~~~~~~~--~~~~~~~~~~~-~~v 196 (359)
+.|..||.. ++..... ...+..++|+ |+| ++.+. .++.|.+||+...+... ..+..... +. ..+
T Consensus 151 ~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-~~~~~p 228 (314)
T 1pjx_A 151 KFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG-THEGGA 228 (314)
T ss_dssp SCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC-CSSCEE
T ss_pred CCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC-CCCCCC
Confidence 578888876 5543322 2356889999 998 44443 56899999854222110 11111111 11 257
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 040274 197 GKVSFRPYEDVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 197 ~~~~~sp~~~~l~~g~~dg~~~i~~~gs~ 225 (359)
..++++++|.++++...++.+.+|.+.++
T Consensus 229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 88999999998888877887877776533
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.86 E-value=2.9e-07 Score=85.59 Aligned_cols=167 Identities=11% Similarity=-0.010 Sum_probs=111.6
Q ss_pred eEEEECCCCCEEEEecc----------------------ceeEEEEcCCCCEEEEEeCCC--eEEEEeCCCCcceEEe--
Q 040274 52 ILWILPSSGRYMAVAGR----------------------RTDLMRVNPFNGVVSLGHSGG--TVTMWKPTTSALLIKM-- 105 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------~v~~l~~sp~~~~l~tg~~dg--~v~lwd~~~~~~~~~~-- 105 (359)
+.|+|+++|+++++... ... ++|+|++..|++++.++ .|.+|+..++.....+
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~ 212 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ 212 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE
T ss_pred eEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee
Confidence 78999999986666543 233 89999999988888766 7999998766543333
Q ss_pred --ecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe----ec---CCc-e-eEEEcCC-C-cE-EEEcCCcEE
Q 040274 106 --LYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT----LT---GHA-K-TLDFSQK-G-LL-AVGTGSFAQ 171 (359)
Q Consensus 106 --~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~----~~---~~v-~-~~~~s~~-g-l~-~~~~d~~i~ 171 (359)
..+...+++++++|++..|+.+..++.|+.||..++..... .. +.. . .++|+|+ + ++ +-...+.|.
T Consensus 213 ~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 213 LGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp CCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 22456678999999544555577789999999987653222 11 112 3 8999995 5 44 444568899
Q ss_pred EEcCCCCCcccccccccc---C--------CCCcceeEEEEccCCCEEEEEe-CCCeEEEEEc
Q 040274 172 ILGDFSGSHNYSRYMGNS---M--------VKGYQIGKVSFRPYEDVLGIGH-SMGWSGILVP 222 (359)
Q Consensus 172 v~d~~~~~~~~~~~~~~~---~--------~~~~~v~~~~~sp~~~~l~~g~-~dg~~~i~~~ 222 (359)
.|+.. +. ...+.++. + ..-.....++|+|+|.++++-+ .++.++.|..
T Consensus 293 ~~~~~-g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 293 KITPD-GE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EECTT-CC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred EEecC-CC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 99843 21 22222221 0 0012478899999999777777 7788887773
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.83 E-value=4.2e-08 Score=98.37 Aligned_cols=138 Identities=10% Similarity=0.008 Sum_probs=91.0
Q ss_pred eeEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCe------------
Q 040274 70 TDLMRVNPFNGVVSLGHSG-----GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECK------------ 132 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~d-----g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~------------ 132 (359)
+..++|||||++|+.++.+ ..|++||+.+++.+... .+...+.+++|+|| +.|+.++.|+.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 5678999999998887654 36999999999865432 22222467899999 88888776553
Q ss_pred --EEEEEcCCCe----eeEeecC---CceeEEEcCCC--cEEEEcC-----CcEEEEcCCCCCcc-ccccccccCCCCcc
Q 040274 133 --IKIWDLRKYE----VLQTLTG---HAKTLDFSQKG--LLAVGTG-----SFAQILGDFSGSHN-YSRYMGNSMVKGYQ 195 (359)
Q Consensus 133 --i~vwd~~~~~----~~~~~~~---~v~~~~~s~~g--l~~~~~d-----~~i~v~d~~~~~~~-~~~~~~~~~~~~~~ 195 (359)
|++|++.++. .+..... .+.++.||||| ++..+.+ ..|.+||+..+... ...+..+.. .
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----~ 318 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK----A 318 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS----S
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC----c
Confidence 8999998765 2222222 36789999999 4444433 38999996543112 333333321 2
Q ss_pred eeEEEEccCCCEEEEEeCC
Q 040274 196 IGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 196 v~~~~~sp~~~~l~~g~~d 214 (359)
+... ++|+|+.|+..+.+
T Consensus 319 ~~~~-~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGD 336 (741)
T ss_dssp CEEE-EEEETTEEEEEECT
T ss_pred eEEE-EeccCCEEEEEECC
Confidence 3333 34888888777654
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.82 E-value=6.4e-07 Score=82.23 Aligned_cols=164 Identities=12% Similarity=0.014 Sum_probs=98.2
Q ss_pred eEEEECCCCCEEEEec------------c----------------ce------------eEEEEcCCCCEEEEEeC--CC
Q 040274 52 ILWILPSSGRYMAVAG------------R----------------RT------------DLMRVNPFNGVVSLGHS--GG 89 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~------------~----------------~v------------~~l~~sp~~~~l~tg~~--dg 89 (359)
-.+.+||||++|+.+. . .+ ..+.|+|+|++|++++. ++
T Consensus 69 p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 69 PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 4889999999998874 1 11 25789999999998874 47
Q ss_pred eEEEEeCCCCcceEE-eecCCCCeEEEEEecCC-CEEEEecCC-------------------------------------
Q 040274 90 TVTMWKPTTSALLIK-MLYHQGPVSALAFHPNG-HLMATTGKE------------------------------------- 130 (359)
Q Consensus 90 ~v~lwd~~~~~~~~~-~~~h~~~v~~l~~~p~g-~~l~s~~~d------------------------------------- 130 (359)
.|.++| .+++.+.. +... +. +.+.|++ ..+++.+.|
T Consensus 149 ~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEec
Confidence 899999 99887766 4321 11 1222222 122222333
Q ss_pred ----------CeEEEEEcCCCe--eeEee-------------cCCceeEEEcCCC--cEEEEc----------CCcEEEE
Q 040274 131 ----------CKIKIWDLRKYE--VLQTL-------------TGHAKTLDFSQKG--LLAVGT----------GSFAQIL 173 (359)
Q Consensus 131 ----------~~i~vwd~~~~~--~~~~~-------------~~~v~~~~~s~~g--l~~~~~----------d~~i~v~ 173 (359)
+.+.+.|+.... .+..+ +.....+.++|++ ++++.. ++.|.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 344444443221 11111 0112236778887 333322 3579999
Q ss_pred cCCCCCccccccccccCCCCcceeEEEEccCCC-EEEEEe-CCCeEEEEEcCCCC
Q 040274 174 GDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED-VLGIGH-SMGWSGILVPRSSE 226 (359)
Q Consensus 174 d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~-~dg~~~i~~~gs~~ 226 (359)
|+.+. +....+... ....++.|+|||+ .++++. .++.+.++...++.
T Consensus 304 D~~t~-~vv~~i~~g-----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 304 TGLVG-QTSSQISLG-----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ECCCC-EEEEEEECC-----CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 96544 444444322 2588999999999 677776 47888888766554
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.81 E-value=7.4e-07 Score=80.11 Aligned_cols=149 Identities=10% Similarity=-0.038 Sum_probs=94.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec---C-CCCeEEEEEecCCCEEEEecC------CCeEEEEEc
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY---H-QGPVSALAFHPNGHLMATTGK------ECKIKIWDL 138 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~---h-~~~v~~l~~~p~g~~l~s~~~------d~~i~vwd~ 138 (359)
.+.+++|+|++.++++. . ..|.+||+.+++....... + ...+++++++|+|+++++... .+.|+.+|
T Consensus 91 ~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~- 167 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA- 167 (326)
T ss_dssp CEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-
T ss_pred cceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-
Confidence 57889999998876654 4 4599999988764332211 1 235889999999997776542 25666777
Q ss_pred CCCeeeEee--cCCceeEEEcCCC--cEEE-EcCCcEEEEcCC-CCC-ccc--cccccccCCCCcceeEEEEccCCCEEE
Q 040274 139 RKYEVLQTL--TGHAKTLDFSQKG--LLAV-GTGSFAQILGDF-SGS-HNY--SRYMGNSMVKGYQIGKVSFRPYEDVLG 209 (359)
Q Consensus 139 ~~~~~~~~~--~~~v~~~~~s~~g--l~~~-~~d~~i~v~d~~-~~~-~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~ 209 (359)
+++..... ......++|+|+| ++.+ +.++.|.+||+. ..+ ... ..+..... ....+..++++++|.+.+
T Consensus 168 -~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 168 -KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG-IKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp -TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT-SSSEEEEEEECTTSCEEE
T ss_pred -CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC-CCCCCCeeEECCCCCEEE
Confidence 45543222 2346789999999 3333 346889999964 122 111 11211110 112567899999998777
Q ss_pred EEeCCCeEEEEEc
Q 040274 210 IGHSMGWSGILVP 222 (359)
Q Consensus 210 ~g~~dg~~~i~~~ 222 (359)
+...++.+.+|.+
T Consensus 246 a~~~~~~v~~~d~ 258 (326)
T 2ghs_A 246 ARWGEGAVDRYDT 258 (326)
T ss_dssp EEETTTEEEEECT
T ss_pred EEeCCCEEEEECC
Confidence 7766676777765
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.80 E-value=5e-07 Score=80.32 Aligned_cols=150 Identities=11% Similarity=-0.034 Sum_probs=101.7
Q ss_pred EEEeccceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q 040274 63 MAVAGRRTDLMRVNPFNG-VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKY 141 (359)
Q Consensus 63 l~~~~~~v~~l~~sp~~~-~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~ 141 (359)
|+.+......+.|+|+++ +++++..++.|..|+. ++. ...+..+...+.+++++++|+++++...++.|.+||.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 444444677899999988 5666777899999998 454 44555667788999999999988777777899999986 5
Q ss_pred eeeEee---c----CCceeEEEcCCC-cEEE-----Ec-------------CCcEEEEcCCCCCccccccccccCCCCcc
Q 040274 142 EVLQTL---T----GHAKTLDFSQKG-LLAV-----GT-------------GSFAQILGDFSGSHNYSRYMGNSMVKGYQ 195 (359)
Q Consensus 142 ~~~~~~---~----~~v~~~~~s~~g-l~~~-----~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 195 (359)
...... . ..+++++++|+| ++.+ .. .+.|..||...+ ...... .. . .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-~~~~~~-~~-~----~ 189 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-PLQRMA-DL-D----H 189 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-CCEEEE-EE-S----S
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-cEEEEe-cC-C----C
Confidence 432211 1 236789999999 5543 11 246777875333 222222 22 1 4
Q ss_pred eeEEEEccCCCEEEEEeCC------CeEEEEEc
Q 040274 196 IGKVSFRPYEDVLGIGHSM------GWSGILVP 222 (359)
Q Consensus 196 v~~~~~sp~~~~l~~g~~d------g~~~i~~~ 222 (359)
...++|+|+++.|+++... +.+.+|..
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEE
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEe
Confidence 6789999999988877665 45555543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.75 E-value=3.6e-07 Score=90.92 Aligned_cols=160 Identities=10% Similarity=0.007 Sum_probs=102.3
Q ss_pred eEEEECCCCCEEEEecc-------------------------c--eeEEEEcCCCCEEEEEeCCC-------------eE
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------R--TDLMRVNPFNGVVSLGHSGG-------------TV 91 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~--v~~l~~sp~~~~l~tg~~dg-------------~v 91 (359)
..++|||||++||.+.. . ...++|+ |++.|+.++.+. .|
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 56789999999996432 2 3678999 999999888774 39
Q ss_pred EEEeCCCCcc--eEEee--c-CCCCeEEEEEecCCCEEEEecC----CCeEEEEEcCCCe-eeEee---cCCceeEEEcC
Q 040274 92 TMWKPTTSAL--LIKML--Y-HQGPVSALAFHPNGHLMATTGK----ECKIKIWDLRKYE-VLQTL---TGHAKTLDFSQ 158 (359)
Q Consensus 92 ~lwd~~~~~~--~~~~~--~-h~~~v~~l~~~p~g~~l~s~~~----d~~i~vwd~~~~~-~~~~~---~~~v~~~~~s~ 158 (359)
++|++.++.. ...+. . |...+.++.|+|||++|+.... +..|++||+.++. ....+ ....... |++
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 9999987653 22222 3 4456789999999998754332 3589999998763 23333 2223333 666
Q ss_pred CC--cEEEEc-C---CcEEEEcCCCCCc-cccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeEEE
Q 040274 159 KG--LLAVGT-G---SFAQILGDFSGSH-NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWSGI 219 (359)
Q Consensus 159 ~g--l~~~~~-d---~~i~v~d~~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~~i 219 (359)
+| ++..+. + +.|.++|+..+.. ....+..+.. .+. .|+|++++|+.... +|...|
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ----QVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS----SCE--EEEEETTEEEEEEEETTEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC----CEE--EEEEECCEEEEEEEECCeeEE
Confidence 66 444443 2 5788898655422 1223333321 343 89999998876654 444333
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.73 E-value=1e-06 Score=80.68 Aligned_cols=153 Identities=7% Similarity=-0.063 Sum_probs=100.8
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCCcceEEeecCC-------CCeEEEEEecCCCEEEEecC--CCe
Q 040274 72 LMRVNPFNGVVSLGH----------SGGTVTMWKPTTSALLIKMLYHQ-------GPVSALAFHPNGHLMATTGK--ECK 132 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~----------~dg~v~lwd~~~~~~~~~~~~h~-------~~v~~l~~~p~g~~l~s~~~--d~~ 132 (359)
.++++|+++++++++ .++.|.+||+.+.+.+..+.... ..-..+.|+|||++++.++. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 499999999887765 36789999999999888775321 23567999999999888764 689
Q ss_pred EEEEEcCCCeeeEeecCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCccccccccccCCCCcce-eEEEEc-cCCCE
Q 040274 133 IKIWDLRKYEVLQTLTGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQI-GKVSFR-PYEDV 207 (359)
Q Consensus 133 i~vwd~~~~~~~~~~~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v-~~~~~s-p~~~~ 207 (359)
|.++|+.+++.+.+++-+- |..+.|.| +++.+.||.+.+.++...+........+......++ ....|. ++|++
T Consensus 162 VsVID~~t~~vv~tI~v~g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~ 240 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL 240 (386)
T ss_dssp EEEEETTTTEEEEEEECCS-EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred EEEEECCCCcEEEEEECCC-cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE
Confidence 9999999999998884321 22233444 678888888888886543333211111100011122 234664 67765
Q ss_pred EEEEeCCCeEEEEEcCCCC
Q 040274 208 LGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 208 l~~g~~dg~~~i~~~gs~~ 226 (359)
++ .+.+|.+.++...++.
T Consensus 241 ~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 241 VW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EE-EBTTSEEEEEECTTSS
T ss_pred EE-EeCCCEEEEEECCCCc
Confidence 54 5557888877765544
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.73 E-value=5.4e-07 Score=83.78 Aligned_cols=150 Identities=8% Similarity=-0.065 Sum_probs=100.5
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCC--eEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC--KIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~--~i~vwd~~~~~~~~~ 146 (359)
....|+|++++.++++...++.|++||+.++........ ..... ++|+|++..|++++.++ .|.+||...+.....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 678999999998777777789999999988765544433 23334 99999999988888766 799999876543333
Q ss_pred e-------cCCceeEEEcC-CC-cEEEEcCCcEEEEcCCCCCcccccccc--ccCCCCcc-eeEEEEccC-CCEEEEEeC
Q 040274 147 L-------TGHAKTLDFSQ-KG-LLAVGTGSFAQILGDFSGSHNYSRYMG--NSMVKGYQ-IGKVSFRPY-EDVLGIGHS 213 (359)
Q Consensus 147 ~-------~~~v~~~~~s~-~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~-v~~~~~sp~-~~~l~~g~~ 213 (359)
+ ...+.+++++| +| ++.+..++.|..||..... ...+.. .....+.. ...++|+|+ +.++++...
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 2 24578999999 66 6666667889999965442 222200 10001111 138999995 555555556
Q ss_pred CCeEEEEEc
Q 040274 214 MGWSGILVP 222 (359)
Q Consensus 214 dg~~~i~~~ 222 (359)
++.+..|..
T Consensus 288 ~~~I~~~~~ 296 (409)
T 3hrp_A 288 LSSVYKITP 296 (409)
T ss_dssp TTEEEEECT
T ss_pred CCEEEEEec
Confidence 676666643
No 215
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.72 E-value=8.1e-07 Score=86.00 Aligned_cols=142 Identities=11% Similarity=0.059 Sum_probs=98.9
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcC--CCeeeEeec--CCce
Q 040274 77 PFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLR--KYEVLQTLT--GHAK 152 (359)
Q Consensus 77 p~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~--~~~~~~~~~--~~v~ 152 (359)
|.+.++++...++.|.+||+.+++.+..+.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+.++. ....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 4455677777899999999999998888764 3456799999999999999999999999996 777777773 3467
Q ss_pred eEEEc----CCC--cEE-EEcCCcEEEEcCCCCCccccccccccC-------CCCcceeEEEEccCCCEEEE-EeCCCeE
Q 040274 153 TLDFS----QKG--LLA-VGTGSFAQILGDFSGSHNYSRYMGNSM-------VKGYQIGKVSFRPYEDVLGI-GHSMGWS 217 (359)
Q Consensus 153 ~~~~s----~~g--l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~-g~~dg~~ 217 (359)
.++|| |+| +++ .-.++.|.|||..+. +.+..+..... .+...+..+.+++++..+++ ...+|.+
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~-~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL-EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTC-CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCC-cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 89999 699 333 335699999996543 33333321110 01225777888887654433 3334544
Q ss_pred EEE
Q 040274 218 GIL 220 (359)
Q Consensus 218 ~i~ 220 (359)
.++
T Consensus 323 ~~v 325 (567)
T 1qks_A 323 LLV 325 (567)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.72 E-value=4.2e-07 Score=83.14 Aligned_cols=107 Identities=8% Similarity=-0.005 Sum_probs=81.0
Q ss_pred cCCCCEEEEEeC-----CCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec----------CCCeEEEEEcCC
Q 040274 76 NPFNGVVSLGHS-----GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG----------KECKIKIWDLRK 140 (359)
Q Consensus 76 sp~~~~l~tg~~-----dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~----------~d~~i~vwd~~~ 140 (359)
.|++..+++... ++.|.++|+.+++.+..+.....+ . +.++|||+++++++ .++.|.+||..+
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 456666555543 579999999999999888765565 4 99999999887775 367899999999
Q ss_pred CeeeEeec--C--------CceeEEEcCCC--cEEEEc--CCcEEEEcCCCCCcccccc
Q 040274 141 YEVLQTLT--G--------HAKTLDFSQKG--LLAVGT--GSFAQILGDFSGSHNYSRY 185 (359)
Q Consensus 141 ~~~~~~~~--~--------~v~~~~~s~~g--l~~~~~--d~~i~v~d~~~~~~~~~~~ 185 (359)
++.+.++. . ....+.|+||| ++++.. ++.|.++|+.+. .....+
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~-~vv~tI 176 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-AFKRML 176 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-cEEEEE
Confidence 99888772 1 46789999999 444443 589999997654 444444
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.70 E-value=1.1e-06 Score=79.45 Aligned_cols=167 Identities=12% Similarity=0.040 Sum_probs=110.8
Q ss_pred eEEEECCCCCEEEEec-------c------------------------ceeEEEEcCCCCEEEEEeC-----CCeEEEEe
Q 040274 52 ILWILPSSGRYMAVAG-------R------------------------RTDLMRVNPFNGVVSLGHS-----GGTVTMWK 95 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~-------~------------------------~v~~l~~sp~~~~l~tg~~-----dg~v~lwd 95 (359)
..++++|+|+.+++.. . .+.++++++++.++++-.. ++.|.+||
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d 99 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWD 99 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEE
Confidence 6788888888877742 1 4678899998876665443 57899999
Q ss_pred CCCCcceEEeecC------CCCeEEEEEecCCCE-EEEec---CCCeEEEEEcCCCeeeEeecC----------------
Q 040274 96 PTTSALLIKMLYH------QGPVSALAFHPNGHL-MATTG---KECKIKIWDLRKYEVLQTLTG---------------- 149 (359)
Q Consensus 96 ~~~~~~~~~~~~h------~~~v~~l~~~p~g~~-l~s~~---~d~~i~vwd~~~~~~~~~~~~---------------- 149 (359)
+.+++.+..+..+ ...++.++++|++.. +++.. .++.|.+||+.+++....+.+
T Consensus 100 ~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 100 TLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 9998866665432 235689999986444 45544 678999999987765443311
Q ss_pred ----------------CceeEEEcCCC--cEEEEcCC-cEEEEcCC--CCCcc-----ccc--cccccCCCCcceeEEEE
Q 040274 150 ----------------HAKTLDFSQKG--LLAVGTGS-FAQILGDF--SGSHN-----YSR--YMGNSMVKGYQIGKVSF 201 (359)
Q Consensus 150 ----------------~v~~~~~s~~g--l~~~~~d~-~i~v~d~~--~~~~~-----~~~--~~~~~~~~~~~v~~~~~ 201 (359)
.+..++|+|+| ++.+...+ .+..++.. ..... ... ..++.. ....+++
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g----~pdgia~ 255 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKP----ICDGISI 255 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC----SCSCEEE
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCC----CCceEEE
Confidence 24779999999 55555444 55555421 01000 000 111211 4567899
Q ss_pred ccCCCEEEEEeCCCeEEEEEc
Q 040274 202 RPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 202 sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+++|.++++...++.+.+|.+
T Consensus 256 d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEET
T ss_pred CCCCCEEEEccCCCeEEEEEC
Confidence 999999999888898888887
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.63 E-value=1.7e-08 Score=92.62 Aligned_cols=138 Identities=12% Similarity=0.088 Sum_probs=79.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecCC----c-e
Q 040274 78 FNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH----A-K 152 (359)
Q Consensus 78 ~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~~----v-~ 152 (359)
++..+++++.||.|..||..+|+.+..+.. +.+.+..+.+++..+++++.|+.|+.||..+++.+..+..+ + .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577999999999999999999999988876 55555556677878888899999999999999877666322 1 1
Q ss_pred eEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 153 TLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 153 ~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
+..++.++ +++++.++.|..||..++ .....+..+. ...++|++..|++++.++.+..|...++.
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG-~~~w~~~~~~--------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTG-EKQQTLSSAF--------ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCC-cEEEEecCCC--------cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 22222355 777788899999997655 3333333221 13456788888888888887777655443
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.61 E-value=3.4e-06 Score=78.40 Aligned_cols=150 Identities=11% Similarity=0.052 Sum_probs=92.9
Q ss_pred EEEEcCCCCEEEEEeC--CCeEEEEeCCCCcceEEeecCCC-------CeEEEEEecCC---------------------
Q 040274 72 LMRVNPFNGVVSLGHS--GGTVTMWKPTTSALLIKMLYHQG-------PVSALAFHPNG--------------------- 121 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~--dg~v~lwd~~~~~~~~~~~~h~~-------~v~~l~~~p~g--------------------- 121 (359)
.+.|+|||+++++++. ++.|.+.|+.+++.+..+..... .-..++++++|
T Consensus 181 ~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~ 260 (426)
T 3c75_H 181 MNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFH 260 (426)
T ss_dssp GSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCS
T ss_pred eEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeec
Confidence 5789999999998874 57899999999887766543110 00112333333
Q ss_pred ----------------CEEEEecCCCeEEEEEcCCCee--eEee-------------cCCceeEEEcCCC--cEEE-Ec-
Q 040274 122 ----------------HLMATTGKECKIKIWDLRKYEV--LQTL-------------TGHAKTLDFSQKG--LLAV-GT- 166 (359)
Q Consensus 122 ----------------~~l~s~~~d~~i~vwd~~~~~~--~~~~-------------~~~v~~~~~s~~g--l~~~-~~- 166 (359)
..++..+..+.|.+.|+..... +..+ +.....++++|+| +++. ..
T Consensus 261 v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~ 340 (426)
T 3c75_H 261 TEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR 340 (426)
T ss_dssp CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC
T ss_pred cCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccc
Confidence 3333334445566666643321 1111 1122347899998 3333 21
Q ss_pred --------CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCC-EEEEEe-CCCeEEEEEcCCCCC
Q 040274 167 --------GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED-VLGIGH-SMGWSGILVPRSSEP 227 (359)
Q Consensus 167 --------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~-~dg~~~i~~~gs~~~ 227 (359)
++.|.++|+.+. +.+..+.... ...++.|+|||+ .++++. .++.+.++...++.-
T Consensus 341 ~~gthk~~s~~VsVID~~T~-kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 341 DEWKHKAASRFVVVLNAETG-ERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp CTTCTTSCEEEEEEEETTTC-CEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred ccccccCCCCEEEEEECCCC-eEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 357999996554 4555554332 488999999999 888888 589899988766543
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.56 E-value=8.1e-06 Score=70.75 Aligned_cols=154 Identities=8% Similarity=-0.019 Sum_probs=98.9
Q ss_pred eeEEEEcCCCCEEEEEeC--CCeEEEEeCCCCcceEEeecCCC-CeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 70 TDLMRVNPFNGVVSLGHS--GGTVTMWKPTTSALLIKMLYHQG-PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~--dg~v~lwd~~~~~~~~~~~~h~~-~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
...|.|+|++.++++.+. ++.|.++|+.+++.+..+..... ....++++. +.+.++.-.++.+.++|..+++.+.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEE
Confidence 468999998644444433 57999999999998887653222 223455542 23445555689999999999999988
Q ss_pred ecCC-ceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccc-cCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 147 LTGH-AKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGN-SMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 147 ~~~~-v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
++.. .....+++|| ++.+..++.|.++|..+. .....+.-. ...+-..++.+.|. +|...+....++.+.++.+
T Consensus 102 i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 102 FTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTF-KLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EECCSSSCCEEEECSSSEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred EECCCCCeEEEEECCCEEEEECCCCeEEEEECCCC-cEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence 8432 3334456677 555556789999996554 333332211 00011136678887 6755555556788888888
Q ss_pred CCCC
Q 040274 223 RSSE 226 (359)
Q Consensus 223 gs~~ 226 (359)
.++.
T Consensus 180 ~tg~ 183 (266)
T 2iwa_A 180 KDGT 183 (266)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7765
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.55 E-value=6.3e-07 Score=89.14 Aligned_cols=138 Identities=7% Similarity=-0.008 Sum_probs=88.5
Q ss_pred ceeEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCC------------
Q 040274 69 RTDLMRVNPFNGVVSLGHS-----GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKEC------------ 131 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~-----dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~------------ 131 (359)
.+..++|||||++|+.+.. +..|++||+.+++.+... .+.....+++|+ ||+.|+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 4778899999998886432 247999999999865431 111113578999 999998887774
Q ss_pred -eEEEEEcCCCe----eeEeecC----CceeEEEcCCC--c-EEEEc---CCcEEEEcCCCCCccccccccccCCCCcce
Q 040274 132 -KIKIWDLRKYE----VLQTLTG----HAKTLDFSQKG--L-LAVGT---GSFAQILGDFSGSHNYSRYMGNSMVKGYQI 196 (359)
Q Consensus 132 -~i~vwd~~~~~----~~~~~~~----~v~~~~~s~~g--l-~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v 196 (359)
.|++|++.+.. ++..... ...++.||||| + ++.+. .+.|+++|+..+......+..+.. ..
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~----~~ 283 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD----AD 283 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS----SC
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC----ce
Confidence 49999998754 2333333 25788999999 3 33332 258999996554323334433321 23
Q ss_pred eEEEEccCCCEEEEEeC
Q 040274 197 GKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 197 ~~~~~sp~~~~l~~g~~ 213 (359)
... |+++|..|+..+.
T Consensus 284 ~~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTN 299 (693)
T ss_dssp EEE-EEEETTEEEEEEC
T ss_pred EEE-EeccCCEEEEEEC
Confidence 333 6677766655443
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=5.5e-06 Score=75.97 Aligned_cols=148 Identities=7% Similarity=-0.133 Sum_probs=99.4
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCCcceEEeecC-------CCCeEEEEEecCCCEEEEecC--CCe
Q 040274 72 LMRVNPFNGVVSLGH----------SGGTVTMWKPTTSALLIKMLYH-------QGPVSALAFHPNGHLMATTGK--ECK 132 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~----------~dg~v~lwd~~~~~~~~~~~~h-------~~~v~~l~~~p~g~~l~s~~~--d~~ 132 (359)
.+++|||+++++++. .++.|.+||+.+.+.+..+... ...-..+.|+|||++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 999999999988886 3678999999988877765432 123457899999999998874 578
Q ss_pred EEEEEcCCCeeeEe-ecCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCcccccccc---ccCCCCcceeEEEEccCC
Q 040274 133 IKIWDLRKYEVLQT-LTGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRYMG---NSMVKGYQIGKVSFRPYE 205 (359)
Q Consensus 133 i~vwd~~~~~~~~~-~~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~~~~~~~v~~~~~sp~~ 205 (359)
|.++| .+++.+.. ++.+ .++.+.|++ +++.+.||.+.++|. .+ ........ ... .........|.+++
T Consensus 150 v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g-~~~~~~~~~~~~~~-~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AG-GAAGAGLVGAMLTA-AQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CC-cEEEEEeccccccC-CcceeecceeEecC
Confidence 99999 99998888 6432 235555665 677778999999997 44 22211110 000 01112345677776
Q ss_pred CEEEEEeCCCeEEEEEcCC
Q 040274 206 DVLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 206 ~~l~~g~~dg~~~i~~~gs 224 (359)
..++..+..+.+.++...+
T Consensus 225 ~~~~~~~~~~~v~vid~~~ 243 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISA 243 (373)
T ss_pred CEEEEEcCCceEEEEeccC
Confidence 6655555667666666543
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.55 E-value=2.7e-06 Score=76.94 Aligned_cols=145 Identities=10% Similarity=0.046 Sum_probs=95.7
Q ss_pred ceeEEEEcCCCCEEEEEe--CCCeEEEEeCCCCcceEEee-------cCCCCeEEEEEecCCCEEEEecC-----CCeEE
Q 040274 69 RTDLMRVNPFNGVVSLGH--SGGTVTMWKPTTSALLIKML-------YHQGPVSALAFHPNGHLMATTGK-----ECKIK 134 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~--~dg~v~lwd~~~~~~~~~~~-------~h~~~v~~l~~~p~g~~l~s~~~-----d~~i~ 134 (359)
.+..++++|+|.++++.. .++.++||.+.++. +..+. .|...+.+++++++|+++++-.. ++.|.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 578999999999988864 23435556554443 22221 34567999999999987666443 57899
Q ss_pred EEEcCCCeeeEeec---------CCceeEEEcCC-C--cEEEE---cCCcEEEEcCCCCCccccccccccC---------
Q 040274 135 IWDLRKYEVLQTLT---------GHAKTLDFSQK-G--LLAVG---TGSFAQILGDFSGSHNYSRYMGNSM--------- 190 (359)
Q Consensus 135 vwd~~~~~~~~~~~---------~~v~~~~~s~~-g--l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~--------- 190 (359)
+||+.+++.+..+. ..+..++++++ | +++-. .++.|.+||+..+ .....+..|..
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g-~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG-LAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC-CEEEECTTCTTTSCCSCCCE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC-CEEEEecCCCccccccccee
Confidence 99999998776662 13588999986 4 44444 5689999996543 22222211100
Q ss_pred ----------C------CCcceeEEEEccCCCEEEEEeCCC
Q 040274 191 ----------V------KGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 191 ----------~------~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
. ....+..++|+|+|++|+++...+
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 0 001368899999999888877665
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.53 E-value=4.1e-06 Score=77.52 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=98.0
Q ss_pred EEEcCCCCEEEEEeCC------CeEEEEeCCCCcceEEeecCCC---CeEEEEEecCCCEEEEec---------------
Q 040274 73 MRVNPFNGVVSLGHSG------GTVTMWKPTTSALLIKMLYHQG---PVSALAFHPNGHLMATTG--------------- 128 (359)
Q Consensus 73 l~~sp~~~~l~tg~~d------g~v~lwd~~~~~~~~~~~~h~~---~v~~l~~~p~g~~l~s~~--------------- 128 (359)
+..+|+| +++++..+ |.|.++|..+.+.+..+....+ .-+.+.|+|+++.|+++.
T Consensus 143 ~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~ 221 (462)
T 2ece_A 143 VHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEH 221 (462)
T ss_dssp EEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTT
T ss_pred eeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhh
Confidence 4567888 76666555 7899999999998888763222 234588899999999885
Q ss_pred ----CCCeEEEEEcCCCeeeEeecC-----CceeEEE--cCCC---cEEEE-----cCCcEEEEcCCCCCc-cccc--cc
Q 040274 129 ----KECKIKIWDLRKYEVLQTLTG-----HAKTLDF--SQKG---LLAVG-----TGSFAQILGDFSGSH-NYSR--YM 186 (359)
Q Consensus 129 ----~d~~i~vwd~~~~~~~~~~~~-----~v~~~~~--s~~g---l~~~~-----~d~~i~v~d~~~~~~-~~~~--~~ 186 (359)
.+..|.+||+.+++.+.++.- ....+.| +|+| ++++. .+++|.+|....+.. .... +.
T Consensus 222 ~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 222 LKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp HHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred hhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC
Confidence 368899999999888888732 2344545 9999 55555 667887654221100 0000 00
Q ss_pred cc----cC---C-----CCcceeEEEEccCCCEEEEEeC-CCeEEEEEc
Q 040274 187 GN----SM---V-----KGYQIGKVSFRPYEDVLGIGHS-MGWSGILVP 222 (359)
Q Consensus 187 ~~----~~---~-----~~~~v~~~~~sp~~~~l~~g~~-dg~~~i~~~ 222 (359)
.. .. . .+.....+.+||||++|.++.. .+.+.+|..
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 00 00 0 0135788999999999988776 456666654
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.50 E-value=5.7e-06 Score=71.75 Aligned_cols=163 Identities=6% Similarity=0.027 Sum_probs=103.9
Q ss_pred eEEEECCCCCEEEEecc------------------------c--eeEEEEcCCCCEEEE-EeCCCeEEEEeCCCCcceEE
Q 040274 52 ILWILPSSGRYMAVAGR------------------------R--TDLMRVNPFNGVVSL-GHSGGTVTMWKPTTSALLIK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~--v~~l~~sp~~~~l~t-g~~dg~v~lwd~~~~~~~~~ 104 (359)
..|.|++||...++.+. . ...++++ +..|+. .-.++.|.++|+.+.+.+..
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 47899998866665442 1 1223333 444444 44678999999999998888
Q ss_pred eecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---C-----CceeEEEcCCC-cEEEE-cCCcEEEEc
Q 040274 105 MLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---G-----HAKTLDFSQKG-LLAVG-TGSFAQILG 174 (359)
Q Consensus 105 ~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~-----~v~~~~~s~~g-l~~~~-~d~~i~v~d 174 (359)
+...... ...+++||..++++..++.|.++|..+.+.+..+. . .++.+.|. +| +++.. .++.|.+.|
T Consensus 102 i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 102 FTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp EECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred EECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 7633122 23455677777777778999999999988877772 1 25678888 77 55555 468999999
Q ss_pred CCCCCccccccccc---------cCCCCcceeEEEEccCCCEEEE-EeCCCeEEEE
Q 040274 175 DFSGSHNYSRYMGN---------SMVKGYQIGKVSFRPYEDVLGI-GHSMGWSGIL 220 (359)
Q Consensus 175 ~~~~~~~~~~~~~~---------~~~~~~~v~~~~~sp~~~~l~~-g~~dg~~~i~ 220 (359)
+.++ .....+... ........+.++|+|+++.|++ +...+.+..+
T Consensus 179 ~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 179 AKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp TTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred CCCC-cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence 7655 444333211 0001124689999999875544 4345544443
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.42 E-value=1.3e-05 Score=74.13 Aligned_cols=141 Identities=9% Similarity=-0.047 Sum_probs=90.8
Q ss_pred EEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCcceEEeecC-C-CCeEEEEE--ecCCCEEEEec
Q 040274 72 LMRVNPFNGVVSLGH-------------------SGGTVTMWKPTTSALLIKMLYH-Q-GPVSALAF--HPNGHLMATTG 128 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~-------------------~dg~v~lwd~~~~~~~~~~~~h-~-~~v~~l~~--~p~g~~l~s~~ 128 (359)
.+.|+|+++.+++.. .+..|.+||+.+++.+.++... . .....+.| +|+++++++++
T Consensus 192 d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 192 DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence 377899999888874 3689999999998877777642 1 23345555 99999877766
Q ss_pred ------CCCeEEEEEcCCCe--eeEee---------------------cCCceeEEEcCCC--cEEEE-cCCcEEEEcCC
Q 040274 129 ------KECKIKIWDLRKYE--VLQTL---------------------TGHAKTLDFSQKG--LLAVG-TGSFAQILGDF 176 (359)
Q Consensus 129 ------~d~~i~vwd~~~~~--~~~~~---------------------~~~v~~~~~s~~g--l~~~~-~d~~i~v~d~~ 176 (359)
.+++|.+|....+. ....+ ...+..|.+|+|| ++++. ..+.|.+||+.
T Consensus 272 e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 272 VVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 56788876654432 11111 1236789999999 33333 35899999975
Q ss_pred CCCc--ccccccccc---------C-CCCcceeEEEEccCCCEEEEEe
Q 040274 177 SGSH--NYSRYMGNS---------M-VKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 177 ~~~~--~~~~~~~~~---------~-~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
.... ....+.... + ........+.++|||++|+++.
T Consensus 352 d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 352 NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 3321 111111110 0 0001257799999999999887
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.41 E-value=5.8e-06 Score=76.85 Aligned_cols=149 Identities=8% Similarity=-0.072 Sum_probs=102.2
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCCcceEEeecC-------CCCeEEEEEecCCCEEEEecC--CCe
Q 040274 72 LMRVNPFNGVVSLGH----------SGGTVTMWKPTTSALLIKMLYH-------QGPVSALAFHPNGHLMATTGK--ECK 132 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~----------~dg~v~lwd~~~~~~~~~~~~h-------~~~v~~l~~~p~g~~l~s~~~--d~~ 132 (359)
.+.++||++++++++ .++.|.++|+.+.+.+..+... ......+.|+|||++|+.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999888776 3678999999999888776531 123467899999999988864 578
Q ss_pred EEEEEcCCCeeeEeecCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCcccc----ccccccCCCCcceeEEEEccCC
Q 040274 133 IKIWDLRKYEVLQTLTGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYS----RYMGNSMVKGYQIGKVSFRPYE 205 (359)
Q Consensus 133 i~vwd~~~~~~~~~~~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~----~~~~~~~~~~~~v~~~~~sp~~ 205 (359)
|.+.|+.+++.+.++.-.- +....|+| +++.+.||.+.+.+. ....... .+.... ......+.|.+++
T Consensus 202 VsVID~~t~kvv~~I~v~g-~~~~~p~g~~~~v~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~---~p~~~~~~~~~dg 276 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD-CYHIFPASPTVFYMNCRDGSLARVDF-ADGETKVTNTEVFHTED---ELLINHPAFSLRS 276 (426)
T ss_dssp EEEEETTTTEEEEEEECCS-EEEEEEEETTEEEEEETTSSEEEEEC-CTTCCEEEECCCCSCTT---SCBCSCCEECTTT
T ss_pred EEEEECCCCeEEEEEEcCC-ceeeccCCCcEEEEEcCCCCEEEEEC-CCCcEEEEeeeeeccCC---CceeeEeeecCCC
Confidence 9999999999988884321 13344544 666777787777775 3322221 111110 0112345789998
Q ss_pred CEEEEEeCCCeEEEEEcCCC
Q 040274 206 DVLGIGHSMGWSGILVPRSS 225 (359)
Q Consensus 206 ~~l~~g~~dg~~~i~~~gs~ 225 (359)
..++..+..+.+.++...+.
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSS
T ss_pred CEEEEEeCCCcEEEEeccCC
Confidence 88877778887777776443
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.40 E-value=1.4e-05 Score=68.69 Aligned_cols=160 Identities=6% Similarity=-0.029 Sum_probs=99.5
Q ss_pred eeEEEEcCCCCEEEEEeCCC--eEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEe-cCCCeEEEEEcCCCeeeEe
Q 040274 70 TDLMRVNPFNGVVSLGHSGG--TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATT-GKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg--~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~-~~d~~i~vwd~~~~~~~~~ 146 (359)
...|.|+ ++.++.+++.+| .|+++|+.+++.+..+.... ........+++..|+.+ -.++.+.+||..+++.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4568888 566666666666 89999999999888876433 34443333445555444 4588999999999999998
Q ss_pred ecCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccccccccc-CCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 147 LTGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNS-MVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 147 ~~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
++-......++++| ++.+..++.|.++|..+. .....+.-.. +.+-..++.+.|. +|...+....++.+.++.+.
T Consensus 123 i~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 123 FNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESL-TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp EECSSCCCCEEECSSCEEECCSSSEEEEECTTTC-SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred EECCCCceEEecCCCEEEEECCCCeEEEEcCCCC-eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 84332323333455 555555678999996554 3333322210 0011134557776 67666555567788888876
Q ss_pred CCCCceeeecc
Q 040274 224 SSEPNFDSWVA 234 (359)
Q Consensus 224 s~~~~~~~~~~ 234 (359)
++. .+..+++
T Consensus 201 tG~-V~~~Id~ 210 (262)
T 3nol_A 201 TGK-VTGIIDL 210 (262)
T ss_dssp TCB-EEEEEEC
T ss_pred CCc-EEEEEEC
Confidence 654 3344444
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.39 E-value=3.8e-08 Score=90.31 Aligned_cols=148 Identities=11% Similarity=-0.071 Sum_probs=71.9
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCC-eE-EEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGP-VS-ALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~-v~-~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
+.+..+.+++..+++++.||.|+.||..+++.+..+..+... +. +..+. ++..+++++.|+.|+.||..+|+.+..+
T Consensus 40 ~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 40 VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp SCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------
T ss_pred ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEe
Confidence 334444556667778889999999999999887766543211 10 11111 3456788888999999999999988777
Q ss_pred cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCC---CEEEEEeCCCeEEEEEc
Q 040274 148 TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE---DVLGIGHSMGWSGILVP 222 (359)
Q Consensus 148 ~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~l~~g~~dg~~~i~~~ 222 (359)
..+- ...++|++ +++++.++.|..||..++. ..-.+... ......++++. ..+++++.+|.+..|..
T Consensus 119 ~~~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~-~~W~~~~~------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 119 SSAF-ADSLSPSTSLLYLGRTEYTITMYDTKTRE-LRWNATYF------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp ---------------EEEEEEEEEEECCCSSSSS-CCCEEEEE------EECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred cCCC-cccccccCCEEEEEecCCEEEEEECCCCC-EEEeEecc------cccCccccCCccccceEEEECCCCEEEEEEC
Confidence 4321 23456665 7778888999999976653 32222211 11222333332 45677888888877766
Q ss_pred CCCC
Q 040274 223 RSSE 226 (359)
Q Consensus 223 gs~~ 226 (359)
.++.
T Consensus 191 ~tG~ 194 (369)
T 2hz6_A 191 ESGD 194 (369)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 5443
No 230
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.37 E-value=1.1e-05 Score=69.33 Aligned_cols=155 Identities=12% Similarity=-0.076 Sum_probs=98.9
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEE--EEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSA--LAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~--l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
...|.|+. +.++.+.+.+|.|+++|+.+++.+..+ . ...... +++.. +.+.+..-.++.+.+||..+++.+.++
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 45677773 556677778889999999999988877 3 233334 55443 234444556899999999999999988
Q ss_pred cC--CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccccccc--ccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 148 TG--HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMG--NSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 148 ~~--~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+. .-+.++ ++| ++.+..++.|.++|..+. .....+.- ... .-..++.+.|. +|...+....+..+.++.
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~-~v~~~I~V~~~g~-~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGF-ALVGAVQVKLRGQ-PVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTC-CEEEEEECEETTE-ECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCC-eEEEEEEeCCCCc-ccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 43 334555 445 555556889999996554 33333222 111 11135667776 776555555677788887
Q ss_pred cCCCCCceeeecc
Q 040274 222 PRSSEPNFDSWVA 234 (359)
Q Consensus 222 ~gs~~~~~~~~~~ 234 (359)
+.++. .+..+++
T Consensus 208 p~TG~-V~~~Idl 219 (268)
T 3nok_A 208 PATGT-VVGVIDA 219 (268)
T ss_dssp TTTCB-EEEEEEC
T ss_pred CCCCc-EEEEEEC
Confidence 76654 3344443
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.35 E-value=1e-05 Score=77.45 Aligned_cols=154 Identities=11% Similarity=-0.006 Sum_probs=103.3
Q ss_pred ceeEEEE-c-CCCCEEEEEe------------------CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec
Q 040274 69 RTDLMRV-N-PFNGVVSLGH------------------SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG 128 (359)
Q Consensus 69 ~v~~l~~-s-p~~~~l~tg~------------------~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~ 128 (359)
....+++ + |++.++++++ .++.|.++|..+.+.+..+.-.. .-..++++|+|+++++++
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 4678887 5 8999988884 34579999999988887776322 346678999999988877
Q ss_pred CCC--------------------------------------eEEEEEcCC--Cee-eEee--cCCceeEEEcCCC-cEEE
Q 040274 129 KEC--------------------------------------KIKIWDLRK--YEV-LQTL--TGHAKTLDFSQKG-LLAV 164 (359)
Q Consensus 129 ~d~--------------------------------------~i~vwd~~~--~~~-~~~~--~~~v~~~~~s~~g-l~~~ 164 (359)
.+. .|.|.|..+ +.. +..+ .....++.++||| ++.+
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V 293 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCV 293 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEE
Confidence 443 377777777 544 4455 3457899999999 3333
Q ss_pred --EcCCcEEEEcCCCCCc-------cccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 040274 165 --GTGSFAQILGDFSGSH-------NYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRS 224 (359)
Q Consensus 165 --~~d~~i~v~d~~~~~~-------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs 224 (359)
..+++|.++|+..... ......... ..+.....++|+|+|...++..-++.+.+|....
T Consensus 294 ~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 294 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 3468999999753210 000111111 1344688999999994445555677777776543
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.33 E-value=6.3e-06 Score=75.23 Aligned_cols=68 Identities=9% Similarity=-0.029 Sum_probs=54.0
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCCcceEEeecC-------CCCeEEEEEecCCCEEEEecC--CCe
Q 040274 72 LMRVNPFNGVVSLGH----------SGGTVTMWKPTTSALLIKMLYH-------QGPVSALAFHPNGHLMATTGK--ECK 132 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~----------~dg~v~lwd~~~~~~~~~~~~h-------~~~v~~l~~~p~g~~l~s~~~--d~~ 132 (359)
.+.++||+..++++. .+++|.+||+.+++.+..+..+ ......++|+|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999888886 3688999999999999888643 123567999999999888764 356
Q ss_pred EEE--EEcC
Q 040274 133 IKI--WDLR 139 (359)
Q Consensus 133 i~v--wd~~ 139 (359)
|.+ +|+.
T Consensus 149 v~V~~iD~~ 157 (368)
T 1mda_H 149 AGLSVPGAS 157 (368)
T ss_dssp EEEEETTTE
T ss_pred EEEEEEchh
Confidence 777 7763
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.30 E-value=4e-06 Score=80.19 Aligned_cols=141 Identities=10% Similarity=0.004 Sum_probs=92.7
Q ss_pred eEEEEcCCCCEEEEEeCCC--------------------------------------eEEEEeCCC--Ccc-eEEeecCC
Q 040274 71 DLMRVNPFNGVVSLGHSGG--------------------------------------TVTMWKPTT--SAL-LIKMLYHQ 109 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~~dg--------------------------------------~v~lwd~~~--~~~-~~~~~~h~ 109 (359)
..++++|+|+++++.+.+. .|.+.|..+ +.. +..+.. .
T Consensus 198 d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g 276 (595)
T 1fwx_A 198 DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-A 276 (595)
T ss_dssp CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-E
T ss_pred cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-C
Confidence 5688999999988888553 377777776 444 344433 2
Q ss_pred CCeEEEEEecCCCEEEEec-CCCeEEEEEcCCCe------------eeEee--cCCceeEEEcCCC--cEEEEcCCcEEE
Q 040274 110 GPVSALAFHPNGHLMATTG-KECKIKIWDLRKYE------------VLQTL--TGHAKTLDFSQKG--LLAVGTGSFAQI 172 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~-~d~~i~vwd~~~~~------------~~~~~--~~~v~~~~~s~~g--l~~~~~d~~i~v 172 (359)
....++.++|||+++++++ .+.+|.++|+.+.+ .+..+ ......++|+|+| +++.-.++.|.+
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVK 356 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEE
Confidence 3457899999999876655 68899999999653 23333 2346889999999 445556899999
Q ss_pred EcCCCC---------CccccccccccCCCC--cceeEEEEccCCCEEEEEeC
Q 040274 173 LGDFSG---------SHNYSRYMGNSMVKG--YQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 173 ~d~~~~---------~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~g~~ 213 (359)
||+... ...+..+..|.. ++ ..-..+.++|||++|+++..
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yq-pGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQ-PGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSC-EEEEEETTTTSTTCCSSEEEEEES
T ss_pred EEhhHhhhhhcccccceeEEEeecccc-cccceeccceEeCCCCCEEEEcCC
Confidence 996441 122333333311 00 01123356899999998765
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.26 E-value=6.2e-05 Score=64.64 Aligned_cols=132 Identities=10% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCCCEEEEE-eCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec-------
Q 040274 77 PFNGVVSLG-HSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT------- 148 (359)
Q Consensus 77 p~~~~l~tg-~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~------- 148 (359)
+++..|+.. ..++.+.+||+.+.+.+.++.... ....+++++..|+.+..++.|.++|..+.+.+.++.
T Consensus 94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~ 170 (262)
T 3nol_A 94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE 170 (262)
T ss_dssp EETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEE
T ss_pred EeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc
Confidence 334444444 458899999999999998887432 223334567777776668899999999998877762
Q ss_pred -CCceeEEEcCCC-cEEEE-cCCcEEEEcCCCCCccccccccc--------cCCCCcceeEEEEccCCCEEEEEeC
Q 040274 149 -GHAKTLDFSQKG-LLAVG-TGSFAQILGDFSGSHNYSRYMGN--------SMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 149 -~~v~~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~--------~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
..++.+.|. +| +++.. .++.|.+.|..++ .....+... ........+.++|+|+++.|++.+.
T Consensus 171 ~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 171 LPELNELEWV-DGEIFANVWQTNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccccceeEEE-CCEEEEEEccCCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 123557776 67 55555 4689999996554 333322211 0012235688999999886665543
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.25 E-value=0.00011 Score=62.59 Aligned_cols=157 Identities=8% Similarity=-0.061 Sum_probs=97.5
Q ss_pred eeEEEEcCCCCEEEEEeCC--CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCE-EEEecCCCeEEEEEcCCCeeeEe
Q 040274 70 TDLMRVNPFNGVVSLGHSG--GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL-MATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~d--g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~-l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
...+.|++ +.++.+.+.+ ..|+++|+.+++.+..+..... .......+.+.. +...-.++.+.+||..+++.+.+
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 55788886 5555555554 4899999999998887764332 333333333444 44455689999999999999998
Q ss_pred ecC--CceeEEEcCCC--cEEEEcCCcEEEEcCCCCCcccccccc--ccCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 147 LTG--HAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMG--NSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 147 ~~~--~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
++. .-..++ +++ ++.+..++.|.++|..+. .....+.- +.. +-..++.+.|. +|...+....+..+.++
T Consensus 101 i~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~-~~~~~I~V~~~g~-~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 101 FRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTL-QQVGSIKVTAGGR-PLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTC-CEEEEEECEETTE-ECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCC-eEEEEEEEccCCc-ccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 843 334454 455 555556789999996554 33332221 111 11135566665 66666555567778888
Q ss_pred EcCCCCCceeeecc
Q 040274 221 VPRSSEPNFDSWVA 234 (359)
Q Consensus 221 ~~gs~~~~~~~~~~ 234 (359)
.+.++. .+..+++
T Consensus 176 Dp~tG~-V~~~idl 188 (243)
T 3mbr_X 176 DPASGK-VVAWIDL 188 (243)
T ss_dssp CTTTCB-EEEEEEC
T ss_pred ECCCCC-EEEEEEC
Confidence 777664 3444444
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.25 E-value=7.7e-05 Score=74.76 Aligned_cols=165 Identities=10% Similarity=0.028 Sum_probs=96.9
Q ss_pred eEEEEC-CCCCEEEEecc---------------------------ceeEEEEcCCCCEEEEEeCC-----CeEEEEeCCC
Q 040274 52 ILWILP-SSGRYMAVAGR---------------------------RTDLMRVNPFNGVVSLGHSG-----GTVTMWKPTT 98 (359)
Q Consensus 52 ~~l~~s-pdg~~l~~~~~---------------------------~v~~l~~sp~~~~l~tg~~d-----g~v~lwd~~~ 98 (359)
..+.|| |||++|+.+.. ....++|+|||+.|+....| ..|+++++.+
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 567999 99999985432 12367899999888777665 2688888887
Q ss_pred Ccce--EEee-cCCCCeEEEEEecCCCEEEEecC---CCeEEEEEcCCCe-ee--Eee----cCCceeEEEcCCC-cEEE
Q 040274 99 SALL--IKML-YHQGPVSALAFHPNGHLMATTGK---ECKIKIWDLRKYE-VL--QTL----TGHAKTLDFSQKG-LLAV 164 (359)
Q Consensus 99 ~~~~--~~~~-~h~~~v~~l~~~p~g~~l~s~~~---d~~i~vwd~~~~~-~~--~~~----~~~v~~~~~s~~g-l~~~ 164 (359)
+... ..+. .+.....++.|+|||++|+..+. ...|+++|+.++. .. ..+ .+...++.|+..+ ++..
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEE
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEE
Confidence 6432 3332 23345678899999998876553 3468899998752 12 333 2234555554444 4444
Q ss_pred Ec-C----CcEEEEcCCCCCccccc-cccccCCCCcceeEEEEccCCCE-EEEEeCCCeEEEEE
Q 040274 165 GT-G----SFAQILGDFSGSHNYSR-YMGNSMVKGYQIGKVSFRPYEDV-LGIGHSMGWSGILV 221 (359)
Q Consensus 165 ~~-d----~~i~v~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~-l~~g~~dg~~~i~~ 221 (359)
+. + ..|.++|+... ..... +..+. ....+..+.+ +++. +++...+|...+++
T Consensus 337 t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~--~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 337 TNEGGAVNHKLLIAPRGQP-SDWSHVLVDHS--EDVFMESIAV--RSNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp ECTTTCTTCEEEEEETTST-TCCCCEEECCC--SSEEEEEEEE--CSSEEEEEEEETTEEEEEE
T ss_pred eCCCCCCCcEEEEEcCCCc-ccceeeEECCC--CCcEEEEEEE--ECCEEEEEEEeCCEEEEEE
Confidence 43 2 25666775332 12222 22221 1113445554 4444 45566677766654
No 237
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.18 E-value=0.00014 Score=64.46 Aligned_cols=152 Identities=12% Similarity=0.119 Sum_probs=101.8
Q ss_pred eeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcceEEeecC-----CC--CeEEEEE---ecCCCEEEEec----------
Q 040274 70 TDLMRVNPFNGVVSLGH-SGGTVTMWKPTTSALLIKMLYH-----QG--PVSALAF---HPNGHLMATTG---------- 128 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~~~~~~~~~h-----~~--~v~~l~~---~p~g~~l~s~~---------- 128 (359)
.-+++|++....|+.++ ..|+|..||+..+........+ .. .+.+|.| .|++++++++.
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 46789998666666666 7899999999865433322221 11 3579999 68888877644
Q ss_pred ---CCCeEEEEEcC---CCeeeEeec------C----------CceeEEEcCCC--cEEEEcC-CcEEEEcCCCCCcccc
Q 040274 129 ---KECKIKIWDLR---KYEVLQTLT------G----------HAKTLDFSQKG--LLAVGTG-SFAQILGDFSGSHNYS 183 (359)
Q Consensus 129 ---~d~~i~vwd~~---~~~~~~~~~------~----------~v~~~~~s~~g--l~~~~~d-~~i~v~d~~~~~~~~~ 183 (359)
.+..|..||+. +++.+.... + .+..++..++| +++.+.. +.|..++. .+. ...
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p-dG~-~~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA-DGK-TVS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT-TSC-CEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC-CCC-EEe
Confidence 26779999999 777665441 2 36899999999 7778888 88888773 332 222
Q ss_pred ccc-ccc-CCCCcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 184 RYM-GNS-MVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 184 ~~~-~~~-~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
.+. ... .......+.++++|+|..|++....|.+..+...
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 221 110 0012236789999999998888777766665543
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.17 E-value=4.7e-05 Score=75.34 Aligned_cols=151 Identities=10% Similarity=0.041 Sum_probs=103.4
Q ss_pred eEEEEcCCCCEEEEEeCCC-------------------eEEEEeCCCCcceEEeec--CC-------CCeEEEEEecCC-
Q 040274 71 DLMRVNPFNGVVSLGHSGG-------------------TVTMWKPTTSALLIKMLY--HQ-------GPVSALAFHPNG- 121 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~~dg-------------------~v~lwd~~~~~~~~~~~~--h~-------~~v~~l~~~p~g- 121 (359)
..++++|++..++.++.++ +|..+|+.+++.+..+.. |. .....+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578889888888887664 599999999999888763 21 112223334477
Q ss_pred --CEEEEecCCCeEEEEEcCCCeeeEeec-CCc-------------------------------------eeEEEcCCC-
Q 040274 122 --HLMATTGKECKIKIWDLRKYEVLQTLT-GHA-------------------------------------KTLDFSQKG- 160 (359)
Q Consensus 122 --~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~v-------------------------------------~~~~~s~~g- 160 (359)
..+++++.+|.|+++|..+|+.+..+. .++ ..++|+|++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 689999999999999999999876652 110 156888876
Q ss_pred -cEEEEc-------------------------------------------CCcEEEEcCCCCCccccccccccCCCCcce
Q 040274 161 -LLAVGT-------------------------------------------GSFAQILGDFSGSHNYSRYMGNSMVKGYQI 196 (359)
Q Consensus 161 -l~~~~~-------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v 196 (359)
+++... .+.|..||+.++ +..-.+... . .+
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~-~----~~ 479 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ-KAAWSVEHV-S----PW 479 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT-EEEEEEEES-S----SC
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC-cEEeecCCC-C----CC
Confidence 333322 167888996655 333232221 1 34
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEEcCCCCC
Q 040274 197 GKVSFRPYEDVLGIGHSMGWSGILVPRSSEP 227 (359)
Q Consensus 197 ~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~~ 227 (359)
....+...+..+++++.+|.+.+|...+++.
T Consensus 480 ~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 4555677888999999999999988776654
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.14 E-value=0.00066 Score=58.57 Aligned_cols=147 Identities=11% Similarity=-0.059 Sum_probs=85.0
Q ss_pred ceeEEEEcCCCCEEEEE-eCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC---CCeEEEEEcCCCeee
Q 040274 69 RTDLMRVNPFNGVVSLG-HSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK---ECKIKIWDLRKYEVL 144 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg-~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~---d~~i~vwd~~~~~~~ 144 (359)
....++++|++..|+.+ ..++.|.++++........+.........++++|++..|+.+.. .+.|..+++.. ...
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~ 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNR 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCc
Confidence 56789999976555554 45678999998754322222222245689999996555554443 46888888764 222
Q ss_pred Eee----cCCceeEEEcCCC--c-EEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CCCe
Q 040274 145 QTL----TGHAKTLDFSQKG--L-LAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMGW 216 (359)
Q Consensus 145 ~~~----~~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg~ 216 (359)
..+ ......+++++++ + ++....+.|.++|+... ......... .....+++ ++..|+++. .++.
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~~~-----~~P~gi~~--d~~~lyva~~~~~~ 230 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVLEGL-----QYPFAVTS--YGKNLYYTDWKTNS 230 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEEECC-----CSEEEEEE--ETTEEEEEETTTTE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEecCC-----CCceEEEE--eCCEEEEEECCCCe
Confidence 222 2346889999976 4 34444578999996432 211111111 12345554 345555444 4466
Q ss_pred EEEEEcCC
Q 040274 217 SGILVPRS 224 (359)
Q Consensus 217 ~~i~~~gs 224 (359)
+.++.+.+
T Consensus 231 v~~~d~~~ 238 (267)
T 1npe_A 231 VIAMDLAI 238 (267)
T ss_dssp EEEEETTT
T ss_pred EEEEeCCC
Confidence 66655543
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.14 E-value=0.00033 Score=62.41 Aligned_cols=147 Identities=12% Similarity=0.036 Sum_probs=85.0
Q ss_pred eeEEEEcC-CCCEEEEEeC-----------------CCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEe-cCC
Q 040274 70 TDLMRVNP-FNGVVSLGHS-----------------GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATT-GKE 130 (359)
Q Consensus 70 v~~l~~sp-~~~~l~tg~~-----------------dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~-~~d 130 (359)
.+.+++.+ +|.+.++-.. +|.|..||..++...... ......+.++|+|+|..|+.+ +..
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLS 206 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGG
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCC
Confidence 56788898 8876665432 367888888766543222 222345679999999865554 566
Q ss_pred CeEEEEEcCCC---e--eeEeecCCceeEEEcCCC-cEEEE-c----------CCcEEEEcCCCCCccccccccccCCCC
Q 040274 131 CKIKIWDLRKY---E--VLQTLTGHAKTLDFSQKG-LLAVG-T----------GSFAQILGDFSGSHNYSRYMGNSMVKG 193 (359)
Q Consensus 131 ~~i~vwd~~~~---~--~~~~~~~~v~~~~~s~~g-l~~~~-~----------d~~i~v~d~~~~~~~~~~~~~~~~~~~ 193 (359)
+.|.+||+... . .+..+.+ ...++++++| ++.+. . .+.|..+|. .+ .....+....+...
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G-~~~~~~~~~~g~~~ 283 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FG-NILEVIPLPPPFAG 283 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TS-CEEEEEECCTTTTT
T ss_pred CeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CC-CEEEEEECCCCCcc
Confidence 89999998742 1 2222345 7889999999 44444 3 356888884 32 33333332211011
Q ss_pred cceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 194 YQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 194 ~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
..++++++ .++.++++....+.+..+.
T Consensus 284 ~~~~~~~~-~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 284 EHFEQIQE-HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp SCCCEEEE-ETTEEEEECSSCSEEEEEE
T ss_pred ccceEEEE-eCCEEEEeecCCCceEEEe
Confidence 23556655 3444333333444444443
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.07 E-value=0.00013 Score=64.66 Aligned_cols=141 Identities=10% Similarity=0.033 Sum_probs=96.5
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.+.++...+++. |..|+.++.|..||.. +..+..+......+.++.+.+++.+++.+ +.|..|| .++..+..+.
T Consensus 138 ~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~ 211 (330)
T 3hxj_A 138 IYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFY 211 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEEC
T ss_pred eeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEc
Confidence 345566666665 5567788999999998 87777776666677888888888766554 7899999 7777666652
Q ss_pred ---CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 149 ---GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 149 ---~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
..+.++..+++| +++++.++.|..+| ..+ .....+.... ..+.++.+.+++ .|.+++.+|.+..+.+
T Consensus 212 ~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g-~~~~~~~~~~----~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 212 AGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDG-TEKWRFKTGK----RIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTS-CEEEEEECSS----CCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred cCCcceeceEECCCCeEEEEcCCCeEEEEC-CCC-CEeEEeeCCC----CccccceEcCCC-eEEEecCCCCEEEECC
Confidence 347888999998 77788888999997 333 2332332221 123445555555 4667777776666654
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.05 E-value=0.0011 Score=57.25 Aligned_cols=149 Identities=10% Similarity=-0.026 Sum_probs=93.0
Q ss_pred ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCE-EEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL-MATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~-l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+.+++|++++..|+.+. .++.|.++++........+........+++++|++.. +++-...+.|.++|+........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 578999999766555554 5789999999865543333233356789999996554 45555678999999874322111
Q ss_pred e--c-CCceeEEEcCC-C-cEEEEc---CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeE
Q 040274 147 L--T-GHAKTLDFSQK-G-LLAVGT---GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWS 217 (359)
Q Consensus 147 ~--~-~~v~~~~~s~~-g-l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~ 217 (359)
. . .....++++|+ | ++.+.. .+.|..+++... ....+... .......++|+|++..|+.+.. .+.+
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~--~~~~~~~~---~~~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--NRRILAQD---NLGLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--CCEEEECT---TCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--CcEEEEEC---CCCCCcEEEEcCCCCEEEEEECCCCEE
Confidence 2 1 35689999995 5 444443 367888875322 22222111 1124788999998877655554 4566
Q ss_pred EEEEc
Q 040274 218 GILVP 222 (359)
Q Consensus 218 ~i~~~ 222 (359)
.++..
T Consensus 192 ~~~~~ 196 (267)
T 1npe_A 192 ECLNP 196 (267)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 65554
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.05 E-value=6.2e-05 Score=75.46 Aligned_cols=107 Identities=11% Similarity=0.104 Sum_probs=71.0
Q ss_pred ceeEEEEc-CCCCEEEEEeC-CC----eEEEEeCCCC-cceEE-eecCCCCeEEEEEecCCCEEEEecCC-----CeEEE
Q 040274 69 RTDLMRVN-PFNGVVSLGHS-GG----TVTMWKPTTS-ALLIK-MLYHQGPVSALAFHPNGHLMATTGKE-----CKIKI 135 (359)
Q Consensus 69 ~v~~l~~s-p~~~~l~tg~~-dg----~v~lwd~~~~-~~~~~-~~~h~~~v~~l~~~p~g~~l~s~~~d-----~~i~v 135 (359)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.+.. +. ....+++|+|||+.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 46788999 99998876653 33 4999999988 63221 11 123568999999888777655 36888
Q ss_pred EEcCCCee--eEee--c--CCceeEEEcCCC--cEEEEc---CCcEEEEcCCCC
Q 040274 136 WDLRKYEV--LQTL--T--GHAKTLDFSQKG--LLAVGT---GSFAQILGDFSG 178 (359)
Q Consensus 136 wd~~~~~~--~~~~--~--~~v~~~~~s~~g--l~~~~~---d~~i~v~d~~~~ 178 (359)
+++.++.. ...+ . ....++.||||| ++..+. ...|.++|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 89887642 2222 2 234678999999 333332 346788886543
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.02 E-value=0.00052 Score=58.34 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=83.8
Q ss_pred EEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec--------CCce
Q 040274 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT--------GHAK 152 (359)
Q Consensus 81 ~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~--------~~v~ 152 (359)
+..+.-.++.+.+||..+.+.+.++..... -..++ +++..|+.+..++.|.++|..+.+.+.++. ..++
T Consensus 77 ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lN 153 (243)
T 3mbr_X 77 LIQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLN 153 (243)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred EEEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccce
Confidence 334444688999999999999988874332 24454 566666666678999999999998887772 2346
Q ss_pred eEEEcCCC-cEEEE-cCCcEEEEcCCCCCcccccccccc---------CCCCcceeEEEEccCCCEEEEEe
Q 040274 153 TLDFSQKG-LLAVG-TGSFAQILGDFSGSHNYSRYMGNS---------MVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 153 ~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~---------~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
.+.|. +| +++.. .++.|.+.|..++ .....+.... .......+.++|+|+++.|.+.+
T Consensus 154 eLe~~-~G~lyanvw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 154 ELEWV-NGELLANVWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred eeEEe-CCEEEEEECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 67766 66 55555 4689999996655 3333222110 01223568899999887554443
No 245
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.01 E-value=0.00015 Score=71.93 Aligned_cols=149 Identities=8% Similarity=0.029 Sum_probs=99.9
Q ss_pred EEEEcCCCCEEEEEeCCCe-------------------EEEEeCCCCcceEEeec--CC-------CCeEEEEEecCCC-
Q 040274 72 LMRVNPFNGVVSLGHSGGT-------------------VTMWKPTTSALLIKMLY--HQ-------GPVSALAFHPNGH- 122 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~dg~-------------------v~lwd~~~~~~~~~~~~--h~-------~~v~~l~~~p~g~- 122 (359)
.++++|++.++++++.++. |..||+.||+.+..+.. |. .++.......+|.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 6788998889998887764 99999999999888764 21 1222223333565
Q ss_pred --EEEEecCCCeEEEEEcCCCeeeEeec-CC-----------------------------------------ceeEEEcC
Q 040274 123 --LMATTGKECKIKIWDLRKYEVLQTLT-GH-----------------------------------------AKTLDFSQ 158 (359)
Q Consensus 123 --~l~s~~~d~~i~vwd~~~~~~~~~~~-~~-----------------------------------------v~~~~~s~ 158 (359)
.++.++.+|.++++|..+|+.+.... .+ -..++|+|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 78899999999999999998874321 00 12368888
Q ss_pred CC--cEEEEc---------------------------------------------CCcEEEEcCCCCCccccccccccCC
Q 040274 159 KG--LLAVGT---------------------------------------------GSFAQILGDFSGSHNYSRYMGNSMV 191 (359)
Q Consensus 159 ~g--l~~~~~---------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~ 191 (359)
+. +++.+. +|.|..||+.++ +..-.+..+.
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~-- 475 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ-QAAWEVPYVT-- 475 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT-EEEEEEEESS--
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC-CeEeEccCCC--
Confidence 76 333221 266888886555 3333333221
Q ss_pred CCcceeEEEEccCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 192 KGYQIGKVSFRPYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 192 ~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
.+....+...+.++++|+.||.++.|...+++
T Consensus 476 ---~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 476 ---IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp ---SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ---CccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 23334566788899999999999988766654
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.00 E-value=0.00061 Score=60.62 Aligned_cols=158 Identities=8% Similarity=0.007 Sum_probs=95.2
Q ss_pred CCCCEEEEecc--ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec--------------------CCCCeEEE
Q 040274 58 SSGRYMAVAGR--RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY--------------------HQGPVSAL 115 (359)
Q Consensus 58 pdg~~l~~~~~--~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~--------------------h~~~v~~l 115 (359)
|.-..+...+. ...+++|++++.+++++..++.|..|+..++.. ..+.. ......++
T Consensus 7 ~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi 85 (322)
T 2fp8_A 7 PILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDI 85 (322)
T ss_dssp ---CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEE
T ss_pred CccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceE
Confidence 33444544432 577899999988788888899999999876543 22221 11357889
Q ss_pred EEec-CCCEEEEecCCCeEEEEEcCCCee--eEee-c----CCceeEEEcC-CC-cEEEEcC------------------
Q 040274 116 AFHP-NGHLMATTGKECKIKIWDLRKYEV--LQTL-T----GHAKTLDFSQ-KG-LLAVGTG------------------ 167 (359)
Q Consensus 116 ~~~p-~g~~l~s~~~d~~i~vwd~~~~~~--~~~~-~----~~v~~~~~s~-~g-l~~~~~d------------------ 167 (359)
++++ +|.++++ ...+.|..+|..++.. +... . ..+..+++.+ +| ++.+...
T Consensus 86 ~~~~~~g~l~v~-d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 86 SYNLQNNQLYIV-DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp EEETTTTEEEEE-ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred EEcCCCCcEEEE-ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCC
Confidence 9998 6655444 4445588888775532 2111 1 2357899999 88 5554432
Q ss_pred CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEE-eCCCeEEEEEcC
Q 040274 168 SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG-HSMGWSGILVPR 223 (359)
Q Consensus 168 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g-~~dg~~~i~~~g 223 (359)
+.|..||.... .......... ....++|+|+|++|+++ +..+.+.++...
T Consensus 165 g~v~~~d~~~~-~~~~~~~~~~-----~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 165 GRLIKYDPSTK-ETTLLLKELH-----VPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp EEEEEEETTTT-EEEEEEEEES-----CCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ceEEEEeCCCC-EEEEeccCCc-----cCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 56888884333 2111111111 35678999999876655 445666665543
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.00 E-value=0.0028 Score=54.42 Aligned_cols=185 Identities=8% Similarity=0.034 Sum_probs=110.6
Q ss_pred ceeEEEEcCCCCE-EEEEeCCCeEEEEeCCCCcceEEee-cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee---
Q 040274 69 RTDLMRVNPFNGV-VSLGHSGGTVTMWKPTTSALLIKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV--- 143 (359)
Q Consensus 69 ~v~~l~~sp~~~~-l~tg~~dg~v~lwd~~~~~~~~~~~-~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~--- 143 (359)
.+..|+|+|++.. +++...++.|...|+. +..+..+. ......-.+++.+++.++++.-.++.+.++++.....
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 6889999997665 4556778899999998 77777664 2235678899999998877776788999998865432
Q ss_pred eEeec---------CCceeEEEcCCC--cEEEEcCCcEEEEcCC--CCCccccccc----cccCCCCcceeEEEEccCCC
Q 040274 144 LQTLT---------GHAKTLDFSQKG--LLAVGTGSFAQILGDF--SGSHNYSRYM----GNSMVKGYQIGKVSFRPYED 206 (359)
Q Consensus 144 ~~~~~---------~~v~~~~~s~~g--l~~~~~d~~i~v~d~~--~~~~~~~~~~----~~~~~~~~~v~~~~~sp~~~ 206 (359)
+.... .....++|+|.+ ++++...+...||.+. .......... .... .-..+.+++|+|...
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~-~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF-TLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC-CSSCCCEEEEETTTT
T ss_pred eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc-ccCCceeEEEcCCCC
Confidence 22221 113789999988 6666654444444422 1111111110 0001 123578999999766
Q ss_pred EEEEEeCCCeEEEEEcCCCCCceeeeccCCCCChhhhhhHHHHHhhh-ccCCCeeeeCCCC
Q 040274 207 VLGIGHSMGWSGILVPRSSEPNFDSWVANPFETSKQRREKEVHSLLD-KLLLETIMLNPSK 266 (359)
Q Consensus 207 ~l~~g~~dg~~~i~~~gs~~~~~~~~~~~~~~~~~~~~e~ev~~ll~-~~~~~~i~~~~~~ 266 (359)
.|++.+..+..-+.+...+. .+..+...+-. ..|.. --+|+.|++|++.
T Consensus 186 ~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~----------~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLVGE-VIGEMSLTKGS----------RGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp EEEEEETTTTEEEEECTTCC-EEEEEECSTTG----------GGCSSCCCSEEEEEECTTC
T ss_pred eEEEEECCCCeEEEEcCCCC-EEEEEEcCCcc----------CCcccccCCCCeeEECCCC
Confidence 66555555443333333333 45555544211 01100 1268999999874
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.95 E-value=0.0018 Score=57.14 Aligned_cols=164 Identities=10% Similarity=0.046 Sum_probs=96.7
Q ss_pred eEEEECCCCCEEEEecc---------------------ceeEEEEcCCCCEEEEEeCC-C-eEEEEeCCCCcceEEee-c
Q 040274 52 ILWILPSSGRYMAVAGR---------------------RTDLMRVNPFNGVVSLGHSG-G-TVTMWKPTTSALLIKML-Y 107 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------~v~~l~~sp~~~~l~tg~~d-g-~v~lwd~~~~~~~~~~~-~ 107 (359)
..++|+++|+.+++... .+.++++++++.++++.... + .|..+|..+++...... .
T Consensus 35 egia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~ 114 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP 114 (306)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred ceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC
Confidence 56778788776555422 46789999999866655433 2 47777877776432222 1
Q ss_pred CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee-eEe--------e-c---CCceeEEEcCCC--c-EEEEcCCcEE
Q 040274 108 HQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV-LQT--------L-T---GHAKTLDFSQKG--L-LAVGTGSFAQ 171 (359)
Q Consensus 108 h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~-~~~--------~-~---~~v~~~~~s~~g--l-~~~~~d~~i~ 171 (359)
.......++..+++..+++-..++.|+++|...+.. +.. . . ...+.+ ++++ + ++-...+.|.
T Consensus 115 ~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~ 192 (306)
T 2p4o_A 115 DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLL 192 (306)
T ss_dssp TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEE
T ss_pred CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEE
Confidence 223345666666665556555688999999876431 110 0 0 123445 7777 3 3334467899
Q ss_pred EEcCCCCCcc--ccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEEc
Q 040274 172 ILGDFSGSHN--YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILVP 222 (359)
Q Consensus 172 v~d~~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~ 222 (359)
+|++...+.. ...+... .....++++++|.++++....+.+.++.+
T Consensus 193 ~~~~~~~g~~~~~~~~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 193 RIPVDSTDKPGEPEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEBCTTSCBCCCEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred EEEeCCCCCCCccEEEecc-----CCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 9996532111 1111111 13566889999987776666677777665
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.95 E-value=0.0016 Score=55.95 Aligned_cols=167 Identities=10% Similarity=-0.041 Sum_probs=98.8
Q ss_pred eEEEECCCCCEEEEecc------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce---EE
Q 040274 52 ILWILPSSGRYMAVAGR------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL---IK 104 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~---~~ 104 (359)
..|+|+|++..|.+... ..-.|++.+++.++++.-.++.+.++++.....+ ..
T Consensus 30 SGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~ 109 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKK 109 (255)
T ss_dssp EEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred ceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeee
Confidence 78888887776665443 4457788888876666556788999887654421 22
Q ss_pred ee------cCCCCeEEEEEecCCCEEEEecCCCe--EEEEEcC-CCeeeEee----------cCCceeEEEcCCC--cEE
Q 040274 105 ML------YHQGPVSALAFHPNGHLMATTGKECK--IKIWDLR-KYEVLQTL----------TGHAKTLDFSQKG--LLA 163 (359)
Q Consensus 105 ~~------~h~~~v~~l~~~p~g~~l~s~~~d~~--i~vwd~~-~~~~~~~~----------~~~v~~~~~s~~g--l~~ 163 (359)
.. .+....-+++|+|.+..|+++..... |+.|+-. ....+..+ ...+.+++++|.. ++.
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lli 189 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLV 189 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEE
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEE
Confidence 21 12345689999999877766665444 5555410 11111211 1236889999975 544
Q ss_pred EE-cCCcEEEEcCCCCCccccccccccCC-----CCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 164 VG-TGSFAQILGDFSGSHNYSRYMGNSMV-----KGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 164 ~~-~d~~i~v~d~~~~~~~~~~~~~~~~~-----~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
.+ .+..|.++|. .+ .....+.-..+. .-.....|+|.|+|+ |++.++......|.
T Consensus 190 LS~~s~~L~~~d~-~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 190 LSHESRALQEVTL-VG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp EETTTTEEEEECT-TC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred EECCCCeEEEEcC-CC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 44 4578888884 33 233222111100 112568899999998 55556666555544
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.91 E-value=9.8e-05 Score=73.06 Aligned_cols=126 Identities=9% Similarity=0.079 Sum_probs=86.0
Q ss_pred CEEEEEeCCCeEEEEeCCCCcceEEeecCC-----------CCe------------------------EEEEEecCCCEE
Q 040274 80 GVVSLGHSGGTVTMWKPTTSALLIKMLYHQ-----------GPV------------------------SALAFHPNGHLM 124 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-----------~~v------------------------~~l~~~p~g~~l 124 (359)
..+++++.+|.|+++|..+|+.+..+.... .++ ..++|+|+..++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 578888999999999999999887654211 011 156889988887
Q ss_pred EEecC-------------------------------------------CCeEEEEEcCCCeeeEeec--CCceeEEEcCC
Q 040274 125 ATTGK-------------------------------------------ECKIKIWDLRKYEVLQTLT--GHAKTLDFSQK 159 (359)
Q Consensus 125 ~s~~~-------------------------------------------d~~i~vwd~~~~~~~~~~~--~~v~~~~~s~~ 159 (359)
++... .+.|..||+.+++.+..+. .++....++.+
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA 487 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeC
Confidence 77543 2789999999999888773 33455555555
Q ss_pred C--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEE
Q 040274 160 G--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLG 209 (359)
Q Consensus 160 g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 209 (359)
| ++.++.++.+++||..++ +.+..+..... ....-+.|.++|+.++
T Consensus 488 g~~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~---~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAATG-EKLWEAPTGTG---VVAAPSTYMVDGRQYV 535 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTC-CEEEEEECSSC---CCSCCEEEEETTEEEE
T ss_pred CCEEEEECCCCcEEEEECCCC-ceeeeeeCCCC---cccCCEEEEeCCEEEE
Confidence 5 666778999999997665 44444433321 1234456778886443
No 251
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.88 E-value=6.6e-05 Score=68.43 Aligned_cols=86 Identities=10% Similarity=-0.020 Sum_probs=69.6
Q ss_pred eEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec----------CCCeEEEEEcCCCeeeEeecC----------
Q 040274 90 TVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG----------KECKIKIWDLRKYEVLQTLTG---------- 149 (359)
Q Consensus 90 ~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~---------- 149 (359)
.|.++|+.+++.+..+.....+ .+.++|||+++++++ .++.|.+||+.+++.+.++.-
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8899999999999988865566 799999999988886 368899999999999988832
Q ss_pred CceeEEEcCCC--cEEEEc--CCcEEE--EcCCC
Q 040274 150 HAKTLDFSQKG--LLAVGT--GSFAQI--LGDFS 177 (359)
Q Consensus 150 ~v~~~~~s~~g--l~~~~~--d~~i~v--~d~~~ 177 (359)
....+.++||| ++.+.. ++.|.+ +|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 36789999999 444443 357888 98644
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.84 E-value=0.0003 Score=62.39 Aligned_cols=131 Identities=4% Similarity=0.010 Sum_probs=90.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec---CCceeEE
Q 040274 79 NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT---GHAKTLD 155 (359)
Q Consensus 79 ~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~v~~~~ 155 (359)
+..|..++.++.|..+|.. +.....+..+...+.++...+++. ++.++.++.|..||.. +..+..+. ..+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 4567788889999999998 777777666666677788887876 5556778999999998 77766652 3467788
Q ss_pred EcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEEE
Q 040274 156 FSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGILV 221 (359)
Q Consensus 156 ~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~~ 221 (359)
+.++| +++++ +.|..|| .++. ....+... ...+.++.+.++|.+ .+++.++.+..+.
T Consensus 184 ~d~~g~l~v~t--~~l~~~d-~~g~-~~~~~~~~----~~~~~~~~~~~~g~l-~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 184 IGKDGTIYFGS--DKVYAIN-PDGT-EKWNFYAG----YWTVTRPAISEDGTI-YVTSLDGHLYAIN 241 (330)
T ss_dssp ECTTCCEEEES--SSEEEEC-TTSC-EEEEECCS----SCCCSCCEECTTSCE-EEEETTTEEEEEC
T ss_pred EcCCCEEEEEe--CEEEEEC-CCCc-EEEEEccC----CcceeceEECCCCeE-EEEcCCCeEEEEC
Confidence 88888 55555 8899999 4442 22222222 125788888888764 4455555555553
No 253
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.83 E-value=0.003 Score=56.37 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=82.3
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeC--CCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKP--TTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~--~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+..+.++|++.+++++...+..+-+|- .+.+.+. ......+..+.+.+++.+++. +.+|.+++++...+..-..
T Consensus 164 ~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~ 240 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGE 240 (327)
T ss_dssp CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECC
T ss_pred ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEe
Confidence 5778899998888777654443444442 2223321 234567889999999876644 5678887775332332222
Q ss_pred e--c-----CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeE
Q 040274 147 L--T-----GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWS 217 (359)
Q Consensus 147 ~--~-----~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~ 217 (359)
+ + ..+.++.+.+++ +++++.++.|..- ...+........... ....+.++.|.+++. +++++.+|.+
T Consensus 241 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S--~DgG~tW~~~~~~~~-~~~~~~~v~~~~~~~-~~~~G~~G~i 315 (327)
T 2xbg_A 241 LLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCS--QDGGQTWQQDVDVKK-VPSNFYKILFFSPDQ-GFILGQKGIL 315 (327)
T ss_dssp CBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEE--SSTTSSCEECGGGTT-SSSCCCEEEEEETTE-EEEECSTTEE
T ss_pred ccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEe--CCCCcccEEcCccCC-CCCCeEEEEEECCCc-eEEEcCCceE
Confidence 2 1 136788898888 7777778877443 223333333321100 112578888876655 4455566644
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.80 E-value=0.00083 Score=57.68 Aligned_cols=127 Identities=9% Similarity=0.074 Sum_probs=85.3
Q ss_pred CEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec--------CCc
Q 040274 80 GVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT--------GHA 151 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~--------~~v 151 (359)
.+.++...++.+.+||+.+.+.+.++... +.-..++ +++..|+.+..++.|.++|..+++.+.++. ..+
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 34444556889999999999999888743 2224444 567777777779999999999998887772 134
Q ss_pred eeEEEcCCC-cEEEE-cCCcEEEEcCCCCCccccccccc---------cCCCCcceeEEEEccCCCEEEEE
Q 040274 152 KTLDFSQKG-LLAVG-TGSFAQILGDFSGSHNYSRYMGN---------SMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 152 ~~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~---------~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
+.+.|. +| +++.. .++.|.+.|..++ .....+... ........+.|+|+|+++.|++.
T Consensus 184 NeLe~~-dG~lyanvw~s~~I~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 184 NELECA-NGVIYANIWHSSDVLEIDPATG-TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EEEEEE-TTEEEEEETTCSEEEEECTTTC-BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred cccEEe-CCEEEEEECCCCeEEEEeCCCC-cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 667777 77 65555 4689999996555 333322111 00022356889999987655443
No 255
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.79 E-value=0.00077 Score=61.19 Aligned_cols=144 Identities=12% Similarity=0.026 Sum_probs=88.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCcceEEeecCC---------CCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeec
Q 040274 78 FNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQ---------GPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLT 148 (359)
Q Consensus 78 ~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~---------~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~ 148 (359)
.+..+++++.++.|..||..+++.+..+.... ..+.+. ...++..++.++.++.|..+|..+++.+..+.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 45678888889999999999999887765421 222221 22245577788889999999999999877663
Q ss_pred --CCc-eeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCC-CcceeEEEEccCCCEEEEEeCCCeEEEEEcC
Q 040274 149 --GHA-KTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVK-GYQIGKVSFRPYEDVLGIGHSMGWSGILVPR 223 (359)
Q Consensus 149 --~~v-~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~g~~dg~~~i~~~g 223 (359)
..+ ...... ++ +++++.++.|..+|..++. ..-.+....... ......... .+..+++++.+|.+..+...
T Consensus 131 ~~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~-~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVVS-DGLVLIHTSNGQLQALNEADGA-VKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCC-EEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCc-EEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECC
Confidence 222 222333 45 7777788999999965553 222222111000 000011222 24567778888877777765
Q ss_pred CCC
Q 040274 224 SSE 226 (359)
Q Consensus 224 s~~ 226 (359)
++.
T Consensus 207 tG~ 209 (376)
T 3q7m_A 207 QGQ 209 (376)
T ss_dssp TCC
T ss_pred CCc
Confidence 443
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.00087 Score=62.44 Aligned_cols=148 Identities=8% Similarity=-0.046 Sum_probs=91.4
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC-CC----eEEEEEcCCCe
Q 040274 69 RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK-EC----KIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~-d~----~i~vwd~~~~~ 142 (359)
....|+++| ++..|+++...+.|+.+|+.++.. ..+.........++|+++|++|+.+.. ++ .+.+++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 467899998 456666666558899999987653 333344556789999999996655544 21 3444443 232
Q ss_pred ee--Eee--cCCceeEEEcC-CC-cEEEE-cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEE-eCC
Q 040274 143 VL--QTL--TGHAKTLDFSQ-KG-LLAVG-TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG-HSM 214 (359)
Q Consensus 143 ~~--~~~--~~~v~~~~~s~-~g-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g-~~d 214 (359)
.. ..+ ..+...++++| +| ++.+. ..+.|..|+.... ... .+.... .......++|+|+|++|+++ ...
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~~-~~~~~~--~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ETT-PLFTIQ--DSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EEE-EEEECS--SSSCCEEEEECTTSSEEEEEETTT
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cEE-EEEEcC--CCCcceeEEEcCCCCEEEEEECCC
Confidence 21 222 34578899999 67 55444 4578999985433 221 111111 11246789999999965554 455
Q ss_pred CeEEEEEc
Q 040274 215 GWSGILVP 222 (359)
Q Consensus 215 g~~~i~~~ 222 (359)
+.+..+..
T Consensus 292 ~~I~~~~~ 299 (430)
T 3tc9_A 292 HYILRSDY 299 (430)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEeC
Confidence 66666543
No 257
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.77 E-value=0.00036 Score=69.19 Aligned_cols=127 Identities=13% Similarity=0.090 Sum_probs=82.7
Q ss_pred EEEEEeCCCeEEEEeCCCCcceEEeecCC----------------------------C-----------CeEEEEEecCC
Q 040274 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQ----------------------------G-----------PVSALAFHPNG 121 (359)
Q Consensus 81 ~l~tg~~dg~v~lwd~~~~~~~~~~~~h~----------------------------~-----------~v~~l~~~p~g 121 (359)
.++.++.+|.++++|..+|+.+....... . .-..++|+|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 67888899999999999998874322100 0 01236888887
Q ss_pred CEEEEecC---------------------------------------------CCeEEEEEcCCCeeeEeec--CCceeE
Q 040274 122 HLMATTGK---------------------------------------------ECKIKIWDLRKYEVLQTLT--GHAKTL 154 (359)
Q Consensus 122 ~~l~s~~~---------------------------------------------d~~i~vwd~~~~~~~~~~~--~~v~~~ 154 (359)
.++++... +|.|..||+.+++.+..++ .++...
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g 480 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGG 480 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCC
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCc
Confidence 77776522 3789999999999888773 333333
Q ss_pred EEcCCC--cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCE-EEEE
Q 040274 155 DFSQKG--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDV-LGIG 211 (359)
Q Consensus 155 ~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~g 211 (359)
.++..| ++.++.|+.|+.||..++ +.+-.+..... ....-+.|..+|+. +++.
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG-~~lw~~~~~~~---~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTG-EKLWEQPAASG---VMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTC-CEEEEEECSSC---CCSCCEEEEETTEEEEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCC-ccceeeeCCCC---cccCceEEEECCEEEEEEE
Confidence 444444 667778999999997665 44444433321 12234677788864 4443
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.76 E-value=0.0034 Score=55.30 Aligned_cols=121 Identities=7% Similarity=-0.015 Sum_probs=71.9
Q ss_pred CCCeEEEEeCCCCcc-eEEee---------cCCCCeEEEEEecCCCEEEE-ecCCCeEEEEEcCC-Cee--eEee--cCC
Q 040274 87 SGGTVTMWKPTTSAL-LIKML---------YHQGPVSALAFHPNGHLMAT-TGKECKIKIWDLRK-YEV--LQTL--TGH 150 (359)
Q Consensus 87 ~dg~v~lwd~~~~~~-~~~~~---------~h~~~v~~l~~~p~g~~l~s-~~~d~~i~vwd~~~-~~~--~~~~--~~~ 150 (359)
.++.|+++|..++.. +.... ......+.+ +|++..|+. -...+.|.+||+.. +.. ...+ ...
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~ 213 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTN 213 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCC
T ss_pred CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCC
Confidence 577888888765421 11100 111234555 788876544 45678899999874 322 1222 235
Q ss_pred ceeEEEcCCC-cEEEE-cCCcEEEEcCCCCCcccc--ccccccCCCCcceeEEEEc---cCCCEEEEEeCCC
Q 040274 151 AKTLDFSQKG-LLAVG-TGSFAQILGDFSGSHNYS--RYMGNSMVKGYQIGKVSFR---PYEDVLGIGHSMG 215 (359)
Q Consensus 151 v~~~~~s~~g-l~~~~-~d~~i~v~d~~~~~~~~~--~~~~~~~~~~~~v~~~~~s---p~~~~l~~g~~dg 215 (359)
...++++++| ++++. ..+.|.+||. .+ .... .+.. .....++++|. |+++.|++++..+
T Consensus 214 P~gi~vd~dG~l~va~~~~~~V~~~~~-~G-~~~~~~~~~~----~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 214 IDDFAFDVEGNLYGATHIYNSVVRIAP-DR-STTIIAQAEQ----GVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CSSEEEBTTCCEEEECBTTCCEEEECT-TC-CEEEEECGGG----TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCCeEECCCCCEEEEeCCCCeEEEECC-CC-CEEEEeeccc----ccCCceEEEEecccCCCCEEEEECCCC
Confidence 6789999999 54444 4688999984 33 2211 1211 11258899998 8988877666543
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.62 E-value=0.018 Score=51.86 Aligned_cols=146 Identities=7% Similarity=-0.085 Sum_probs=84.6
Q ss_pred ceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEe-cCC-CeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVV-SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATT-GKE-CKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l-~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~-~~d-~~i~vwd~~~~~~~~ 145 (359)
....+++++.+..| ++-...+.|.+.++........+........+++++|.+..|+.+ ... +.|..+++... ...
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~ 195 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRR 195 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcE
Confidence 34678888755444 444556789999987544333333334567899999965555444 344 78999988743 222
Q ss_pred ee-c---CCceeEEEcCCC--c-EEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEE
Q 040274 146 TL-T---GHAKTLDFSQKG--L-LAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSG 218 (359)
Q Consensus 146 ~~-~---~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~ 218 (359)
.+ . ...+.++|+|++ + ++-+..+.|..+|+... .....+... ......+++ ..+.++.+-...+.+.
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~-~~~~~~~~~----~~~P~giav-~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQG----LPHPFAITV-FEDSLYWTDWHTKSIN 269 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSS----CSSEEEEEE-ETTEEEEEETTTTEEE
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC-ceEEEEeCC----CCCceEEEE-ECCEEEEecCCCCeEE
Confidence 22 1 246889999865 4 44444578999985432 211111111 113566777 3444444444556665
Q ss_pred EEE
Q 040274 219 ILV 221 (359)
Q Consensus 219 i~~ 221 (359)
.+.
T Consensus 270 ~~~ 272 (349)
T 3v64_C 270 SAN 272 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.59 E-value=0.024 Score=51.02 Aligned_cols=148 Identities=6% Similarity=-0.120 Sum_probs=91.0
Q ss_pred ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+..++|++.+..|+... ..+.|..+++..+.....+........++++++. +.++++-...+.|.+.++........
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 568899998666655554 6788999998866543333333345678999985 44555656678999999875432222
Q ss_pred ec---CCceeEEEcCCC--cEEEE-cC-CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeEE
Q 040274 147 LT---GHAKTLDFSQKG--LLAVG-TG-SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWSG 218 (359)
Q Consensus 147 ~~---~~v~~~~~s~~g--l~~~~-~d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~~ 218 (359)
+. .....++++|.+ ++.+. .. +.|..+++... ....+... .......++|+|++..|+.+.. .+.|.
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~~~~---~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--GRRIIADT---HLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEESCCS---SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC--CcEEEEEC---CCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 22 346899999854 43333 34 67888875322 22222211 1124788999997776665543 44455
Q ss_pred EEE
Q 040274 219 ILV 221 (359)
Q Consensus 219 i~~ 221 (359)
.+.
T Consensus 229 ~~~ 231 (349)
T 3v64_C 229 RAN 231 (349)
T ss_dssp EEE
T ss_pred EEe
Confidence 444
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.58 E-value=0.002 Score=63.60 Aligned_cols=74 Identities=14% Similarity=0.234 Sum_probs=56.2
Q ss_pred EEEEcCCCCEEEEEeCCC-------------------eEEEEeCCCCcceEEeec--CC-------CCeEEEEEecCCC-
Q 040274 72 LMRVNPFNGVVSLGHSGG-------------------TVTMWKPTTSALLIKMLY--HQ-------GPVSALAFHPNGH- 122 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~dg-------------------~v~lwd~~~~~~~~~~~~--h~-------~~v~~l~~~p~g~- 122 (359)
.++++|++..++.++.++ .|..+|+.+++.+..+.. |. .+.....+..+|.
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 478888888888887766 499999999999888764 22 2333333334665
Q ss_pred --EEEEecCCCeEEEEEcCCCeeeE
Q 040274 123 --LMATTGKECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 123 --~l~s~~~d~~i~vwd~~~~~~~~ 145 (359)
.++.++.+|.++++|..+|+.+.
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEEECCCCEEEEEECCCCCEec
Confidence 68899999999999999998874
No 262
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.56 E-value=0.0057 Score=56.94 Aligned_cols=167 Identities=11% Similarity=0.069 Sum_probs=98.2
Q ss_pred eEEEECCCCCEEEEecc---------------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcceE
Q 040274 52 ILWILPSSGRYMAVAGR---------------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALLI 103 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~---------------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~~ 103 (359)
..++++++|+++++... ....++++| ++.++++-..++.|+.+|+.++....
T Consensus 185 ~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~ 264 (433)
T 4hw6_A 185 ADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE 264 (433)
T ss_dssp EEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE
T ss_pred cEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE
Confidence 88999999996555430 245688888 66665565567889999998776523
Q ss_pred Eee--cCCCCeEEEEEecCCCEE-EEecCCCeEEEEEcC--CCee--eEeec------------------CCceeEEE--
Q 040274 104 KML--YHQGPVSALAFHPNGHLM-ATTGKECKIKIWDLR--KYEV--LQTLT------------------GHAKTLDF-- 156 (359)
Q Consensus 104 ~~~--~h~~~v~~l~~~p~g~~l-~s~~~d~~i~vwd~~--~~~~--~~~~~------------------~~v~~~~~-- 156 (359)
.+. +....-..++|+|+|++| ++-...+.|..+|+. ++.. ...+. .....+++
T Consensus 265 ~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~ 344 (433)
T 4hw6_A 265 EEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVK 344 (433)
T ss_dssp EEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEE
T ss_pred EEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEc
Confidence 322 122233579999999854 455567889998865 2321 11110 12466888
Q ss_pred -------cCCC-cEEEE-cCCcEEEEcCCCCCcccccccccc-----C---------CCCcceeEEEEc-cCCCEEEEEe
Q 040274 157 -------SQKG-LLAVG-TGSFAQILGDFSGSHNYSRYMGNS-----M---------VKGYQIGKVSFR-PYEDVLGIGH 212 (359)
Q Consensus 157 -------s~~g-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~-----~---------~~~~~v~~~~~s-p~~~~l~~g~ 212 (359)
.++| ++.+. ..+.|+.++. .+ . +..+.+.. + ..-.....++++ ++|.++++-.
T Consensus 345 n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G-~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 345 NEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG-R-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp CGGGTTSSCCEEEEEEETTTTEEEEECT-TS-E-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred cccccccCCCCcEEEEECCCCEEEEECC-CC-C-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 6777 44444 4578888873 32 1 22211110 0 001236788888 5665555545
Q ss_pred CCCeEEEEE
Q 040274 213 SMGWSGILV 221 (359)
Q Consensus 213 ~dg~~~i~~ 221 (359)
.++.++.+.
T Consensus 422 ~n~rIr~i~ 430 (433)
T 4hw6_A 422 DNHRVRKIA 430 (433)
T ss_dssp GGTEEEEEE
T ss_pred CCCEEEEEe
Confidence 555555443
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.56 E-value=0.02 Score=57.52 Aligned_cols=143 Identities=12% Similarity=0.051 Sum_probs=92.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec--------CCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY--------HQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~--------h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~ 140 (359)
.|.++...++|. |-.|+.++-|..|+..++....-... ....|.++...++|.+|..|+.++-|.+||..+
T Consensus 358 ~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 358 VVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp SEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred eeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 477888777775 44577777899999887654322111 235789999999998566667767799999987
Q ss_pred CeeeEee-------cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccc---cCCCCcceeEEEEccCCCEEE
Q 040274 141 YEVLQTL-------TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGN---SMVKGYQIGKVSFRPYEDVLG 209 (359)
Q Consensus 141 ~~~~~~~-------~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~---~~~~~~~v~~~~~sp~~~~l~ 209 (359)
++...-. ...|.++...++| ++.++. +.|.+||..+. . ...+... .......|.++...++|.+.+
T Consensus 437 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 437 GQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR-S-FTTIEKEKDGTPVVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp CCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT-E-EEECCBCTTCCBCCCCCEEEEEECTTCCEEE
T ss_pred CcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC-e-EEEccccccccccCCceEEEEEECCCCCEEE
Confidence 7543321 2357888888888 777766 56888985433 1 1122110 011234689999988887665
Q ss_pred EEeCCCe
Q 040274 210 IGHSMGW 216 (359)
Q Consensus 210 ~g~~dg~ 216 (359)
.+. +|.
T Consensus 514 gt~-~Gl 519 (795)
T 4a2l_A 514 GGE-EGL 519 (795)
T ss_dssp EES-SCE
T ss_pred EeC-Cce
Confidence 444 553
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.012 Score=54.79 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=61.3
Q ss_pred eEEEECCCCCEEEEecc----------------------------ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCcce
Q 040274 52 ILWILPSSGRYMAVAGR----------------------------RTDLMRVNP-FNGVVSLGHSGGTVTMWKPTTSALL 102 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~----------------------------~v~~l~~sp-~~~~l~tg~~dg~v~lwd~~~~~~~ 102 (359)
..++|+++|++|..+.. ....++++| ++.++++-..++.|..|++.++...
T Consensus 182 ~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 182 RTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp EEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 78999999995544321 346788999 6666666667789999999876532
Q ss_pred EEee-cCCCCeEEEEEecCCCE-EEEecCCCeEEEEEcC
Q 040274 103 IKML-YHQGPVSALAFHPNGHL-MATTGKECKIKIWDLR 139 (359)
Q Consensus 103 ~~~~-~h~~~v~~l~~~p~g~~-l~s~~~d~~i~vwd~~ 139 (359)
..+. .....-+.++|+|+|++ +++-...+.|..+|..
T Consensus 262 ~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 262 PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 2222 12234678999999995 4555567889998765
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.53 E-value=0.021 Score=52.19 Aligned_cols=147 Identities=7% Similarity=-0.084 Sum_probs=84.7
Q ss_pred ceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec-CC-CeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVV-SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG-KE-CKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l-~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~-~d-~~i~vwd~~~~~~~~ 145 (359)
....+++++.+..| ++-...+.|.+.++........+.........++++|.+..|+.+. .. +.|..+++.......
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 239 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 239 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 34568888754444 4444567888888875443333333345678999999766655544 34 688888887432222
Q ss_pred ee---cCCceeEEEcCCC--c-EEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEE
Q 040274 146 TL---TGHAKTLDFSQKG--L-LAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGI 219 (359)
Q Consensus 146 ~~---~~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i 219 (359)
.. -...+.|+|+|++ + ++-+..+.|..+|+... . ...+... .......+++ ..+.++.+....+.+..
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~-~~~~~~~---~~~~P~giav-~~~~ly~td~~~~~V~~ 313 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-H-RKAVISQ---GLPHPFAITV-FEDSLYWTDWHTKSINS 313 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-S-CEEEECS---SCSSEEEEEE-ETTEEEEEETTTTEEEE
T ss_pred EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-e-eEEEEEC---CCCCceEEEE-ECCEEEEeeCCCCeEEE
Confidence 22 1246889999765 4 44445678999985432 2 2222111 1113567777 34444455555666665
Q ss_pred EE
Q 040274 220 LV 221 (359)
Q Consensus 220 ~~ 221 (359)
+.
T Consensus 314 ~~ 315 (386)
T 3v65_B 314 AN 315 (386)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 266
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.49 E-value=0.0028 Score=52.70 Aligned_cols=137 Identities=18% Similarity=0.119 Sum_probs=82.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce------EEee--cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL------IKML--YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~------~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~ 140 (359)
.+..++|+|++.+.++ .+|.++-.++.+.... ..+- +..+ ..++.|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 6789999998876655 7788777777553221 1110 1112 578999999988777 669999888644
Q ss_pred Ceee------Eee-c---CCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCcc----ccccccccCCCCcceeEEEEccCC
Q 040274 141 YEVL------QTL-T---GHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHN----YSRYMGNSMVKGYQIGKVSFRPYE 205 (359)
Q Consensus 141 ~~~~------~~~-~---~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~----~~~~~~~~~~~~~~v~~~~~sp~~ 205 (359)
...- ..+ . ..+..|.++|+| |.++. ++.+.-+........ ......+.. ......+.|+|++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g--~~~yr~l~f~~~G 193 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGG--WDTFKFLFFSSVG 193 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSS--GGGEEEEEECTTS
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCC--cceEEEEEECCCC
Confidence 2111 111 1 246899999999 77777 887644432211100 011111111 1134446799999
Q ss_pred CEEEEEeCCC
Q 040274 206 DVLGIGHSMG 215 (359)
Q Consensus 206 ~~l~~g~~dg 215 (359)
.+.++. +|
T Consensus 194 ~l~~v~--~g 201 (236)
T 1tl2_A 194 TLFGVQ--GG 201 (236)
T ss_dssp CEEEEE--TT
T ss_pred cEEEEe--CC
Confidence 877776 55
No 267
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.49 E-value=0.022 Score=50.67 Aligned_cols=142 Identities=13% Similarity=0.181 Sum_probs=79.6
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-ceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEc--CCCeeeEe
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA-LLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDL--RKYEVLQT 146 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~-~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~--~~~~~~~~ 146 (359)
+..+.+.+++..++++ .+|.|.. ..+.+. -......+...+.++.++|++.+++++...+.++-+|- .+.+.+..
T Consensus 124 ~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 124 PRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp EEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC
T ss_pred eEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC
Confidence 4556666666555554 4554422 222232 12222345567899999999988877655444444553 33344322
Q ss_pred e-cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCC
Q 040274 147 L-TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSM 214 (359)
Q Consensus 147 ~-~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~d 214 (359)
. ...+..+.+++++ +++++.+|.+.+.+ ...+.....+..........+.++.|.|++.+++++...
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~-~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 202 TTSRRLHNMGFTPDGRLWMIVNGGKIAFSD-PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp CSSSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CCCCccceeEECCCCCEEEEeCCceEEEec-CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 2 3456788899998 77788888877763 111122211111100012258899999988877776643
No 268
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.48 E-value=0.0044 Score=56.09 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=88.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCe-----EEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecCC---
Q 040274 79 NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPV-----SALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTGH--- 150 (359)
Q Consensus 79 ~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v-----~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--- 150 (359)
+..+++++.++.|..+|..+++.+..+....... ...... +..++.++.++.|..+|..+++.+..+...
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 3467777888889999988888777665432211 122222 346778888999999999999887766311
Q ss_pred ----------c-eeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEE
Q 040274 151 ----------A-KTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSG 218 (359)
Q Consensus 151 ----------v-~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~ 218 (359)
+ ....+. ++ +++++.++.+..+|..++. ..-..... ...++.. ++..|++++.+|.+.
T Consensus 221 ~~~~~~~~~~~~~~p~~~-~~~v~~~~~~g~l~~~d~~tG~-~~w~~~~~------~~~~~~~--~~~~l~~~~~~g~l~ 290 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVV-NGVVFALAYNGNLTALDLRSGQ-IMWKRELG------SVNDFIV--DGNRIYLVDQNDRVM 290 (376)
T ss_dssp ---------CCCCCCEEE-TTEEEEECTTSCEEEEETTTCC-EEEEECCC------CEEEEEE--ETTEEEEEETTCCEE
T ss_pred CCcccccccccCCCcEEE-CCEEEEEecCcEEEEEECCCCc-EEeeccCC------CCCCceE--ECCEEEEEcCCCeEE
Confidence 1 111222 34 7777778999999965553 22222111 2333333 467788888888888
Q ss_pred EEEcCCCCCceeeecc
Q 040274 219 ILVPRSSEPNFDSWVA 234 (359)
Q Consensus 219 i~~~gs~~~~~~~~~~ 234 (359)
.+...++. .+|..
T Consensus 291 ~~d~~tG~---~~w~~ 303 (376)
T 3q7m_A 291 ALTIDGGV---TLWTQ 303 (376)
T ss_dssp EEETTTCC---EEEEE
T ss_pred EEECCCCc---EEEee
Confidence 88876654 34554
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.44 E-value=0.023 Score=51.84 Aligned_cols=148 Identities=6% Similarity=-0.125 Sum_probs=89.0
Q ss_pred ceeEEEEcCCCCEEEEE-eCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLG-HSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg-~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+..++|++.+..|+.. ...+.|..+++..+.....+.........+++++. +.++++-...+.|.+.++........
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 196 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe
Confidence 57789999865555544 46788999998866533333333344578899975 44455555678899988874432222
Q ss_pred ec---CCceeEEEcCCC--cEEEE-cC-CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeEE
Q 040274 147 LT---GHAKTLDFSQKG--LLAVG-TG-SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWSG 218 (359)
Q Consensus 147 ~~---~~v~~~~~s~~g--l~~~~-~d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~~ 218 (359)
+. .....++++|.+ ++.+. .. +.|..+++... ....+... .......++|+|++..|+.+.. .+.|.
T Consensus 197 ~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~~~~---~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 197 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--GRRIIADT---HLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEEECS---SCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC--CcEEEEEC---CCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 22 346889999865 43333 33 67888875332 22222211 1124688999987776665543 44444
Q ss_pred EEE
Q 040274 219 ILV 221 (359)
Q Consensus 219 i~~ 221 (359)
.+.
T Consensus 272 ~~d 274 (386)
T 3v65_B 272 RAN 274 (386)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 270
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.41 E-value=0.012 Score=53.82 Aligned_cols=142 Identities=10% Similarity=0.047 Sum_probs=89.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCcceEEeecC----CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCe-----------
Q 040274 78 FNGVVSLGHSGGTVTMWKPTTSALLIKMLYH----QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYE----------- 142 (359)
Q Consensus 78 ~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h----~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~----------- 142 (359)
+|.-++++- ++.||..++.....-..+... -+.|..+..||+|.+||..+. ..|.|-.+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccc
Confidence 455555543 467888787744333333322 235788999999999988865 468888776321
Q ss_pred -eeEee---------cCCceeEEEcCCC-----cEEEEcCCcEEEEcCCCCCccccccc------cccCCCCcceeEEEE
Q 040274 143 -VLQTL---------TGHAKTLDFSQKG-----LLAVGTGSFAQILGDFSGSHNYSRYM------GNSMVKGYQIGKVSF 201 (359)
Q Consensus 143 -~~~~~---------~~~v~~~~~s~~g-----l~~~~~d~~i~v~d~~~~~~~~~~~~------~~~~~~~~~v~~~~~ 201 (359)
...++ ...|..+.|+|-| +++...|+.|++||+.........+. +... ....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~-~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDA-RVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCS-SCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCc-ccceEEEEEE
Confidence 01122 1358899999976 88999999999999865322211111 1100 1136889999
Q ss_pred ccCCCEEEEEe--CCCeEEEEEc
Q 040274 202 RPYEDVLGIGH--SMGWSGILVP 222 (359)
Q Consensus 202 sp~~~~l~~g~--~dg~~~i~~~ 222 (359)
.+++-.|.+.+ .+|-+.-+.|
T Consensus 188 g~~~lTLYvl~~t~~GDIYAlcP 210 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAFYP 210 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEESS
T ss_pred cCCCcEEEEEecCCCCCEEEECC
Confidence 99776666644 6665555544
No 271
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.40 E-value=0.02 Score=57.36 Aligned_cols=146 Identities=10% Similarity=0.030 Sum_probs=91.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee--cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML--YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.|.++...+++.+ ..|+.++-|..|+..++....... .....|.++...++|.+.+.. . +-|.+||..++.....
T Consensus 408 ~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 408 SVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHH 484 (781)
T ss_dssp BEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEE
T ss_pred ceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEec
Confidence 3666776666654 446666778899987765332211 134678999988888765544 4 5589999887654322
Q ss_pred e--------cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeE
Q 040274 147 L--------TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWS 217 (359)
Q Consensus 147 ~--------~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~ 217 (359)
. ...|.++...++| +..++.++.|..||.... ....+......+...|.++...++|.+.+.. .+|.+
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv 561 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ--LVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLV 561 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC--EEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEE
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC--eEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCce
Confidence 2 1357889899999 777777666888985332 2222221111134468999998888765544 36653
Q ss_pred EEE
Q 040274 218 GIL 220 (359)
Q Consensus 218 ~i~ 220 (359)
..+
T Consensus 562 ~~~ 564 (781)
T 3v9f_A 562 CFP 564 (781)
T ss_dssp EES
T ss_pred EEE
Confidence 443
No 272
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.36 E-value=0.029 Score=56.22 Aligned_cols=143 Identities=11% Similarity=0.073 Sum_probs=88.4
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecC-----CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeee
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYH-----QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVL 144 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h-----~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~ 144 (359)
|.++...+++. |..|+. +-|.+||..++......... ...|.++...++|.+.+.....| |..||..++...
T Consensus 452 v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~ 528 (781)
T 3v9f_A 452 VRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVR 528 (781)
T ss_dssp EEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEE
T ss_pred EEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEE
Confidence 56666666664 444555 56889998876543322222 35789999999998665544344 788998766543
Q ss_pred Eee------cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeE
Q 040274 145 QTL------TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWS 217 (359)
Q Consensus 145 ~~~------~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~ 217 (359)
.-. ...|.++...++| +..++.+|.|..||.... ....+....+.+...|.++...++|.+.+ ++.+|..
T Consensus 529 ~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~--~~~~~~~~~gl~~~~i~~i~~d~~g~lW~-~t~~Gl~ 605 (781)
T 3v9f_A 529 KFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNF--DYQVFQRKEGLPNTHIRAISEDKNGNIWA-STNTGIS 605 (781)
T ss_dssp EECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTC--CCEEECGGGTCSCCCCCEEEECSSSCEEE-ECSSCEE
T ss_pred EccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCC--cEEEccccCCCCCceEEEEEECCCCCEEE-EcCCceE
Confidence 221 2347888888999 776766555488985433 22233222222444688898888887554 4566644
Q ss_pred E
Q 040274 218 G 218 (359)
Q Consensus 218 ~ 218 (359)
.
T Consensus 606 ~ 606 (781)
T 3v9f_A 606 C 606 (781)
T ss_dssp E
T ss_pred E
Confidence 3
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.34 E-value=0.008 Score=58.06 Aligned_cols=74 Identities=11% Similarity=0.004 Sum_probs=52.1
Q ss_pred EEEcCCCCEEEEEeCC----------------CeEEEEeCCCCcceEEeecC--C--------CCeEEEEEecCCC---E
Q 040274 73 MRVNPFNGVVSLGHSG----------------GTVTMWKPTTSALLIKMLYH--Q--------GPVSALAFHPNGH---L 123 (359)
Q Consensus 73 l~~sp~~~~l~tg~~d----------------g~v~lwd~~~~~~~~~~~~h--~--------~~v~~l~~~p~g~---~ 123 (359)
+++++....++.++.+ +.|..+|+.+++.+..+... . .++. +...++|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence 6677766677766532 36999999999988877632 1 2221 22234674 5
Q ss_pred EEEecCCCeEEEEEcCCCeeeEee
Q 040274 124 MATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 124 l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
++.++.+|.++++|..+|+.+..+
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEeCCCcEEEEEECCCCCEEeee
Confidence 778889999999999999887665
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.34 E-value=0.015 Score=54.14 Aligned_cols=150 Identities=11% Similarity=-0.038 Sum_probs=88.4
Q ss_pred ceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCC---C-eEEEEEcCCCe
Q 040274 69 RTDLMRVNPF--NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKE---C-KIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~--~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d---~-~i~vwd~~~~~ 142 (359)
....|+|+|+ +..|+.+...+.|+.+|+.++... .+........+++|+++|.++++.... . .+..++...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4678999994 455666655589999999877644 343445568999999999955554321 2 23333332211
Q ss_pred e-eEee--cCCceeEEEcC-CC-cEEEE-cCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CCC
Q 040274 143 V-LQTL--TGHAKTLDFSQ-KG-LLAVG-TGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMG 215 (359)
Q Consensus 143 ~-~~~~--~~~v~~~~~s~-~g-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg 215 (359)
. ...+ ......++++| +| ++.+. .++.|+.+|...+ .....+.... .......++|+|+|++|+++. ..+
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g-~~~~~~~~~~--~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG-TLTEEEVMMD--TKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC-CEEEEEEECS--CCSSCEEEEECTTSSEEEEEETTTT
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC-eEEEEEeccC--CCCCcccEEEeCCCCEEEEEeCCCC
Confidence 1 0111 23467899999 67 55444 4578999985433 2212222111 111235699999999665554 456
Q ss_pred eEEEEEc
Q 040274 216 WSGILVP 222 (359)
Q Consensus 216 ~~~i~~~ 222 (359)
.+..+..
T Consensus 296 ~I~~~~~ 302 (433)
T 4hw6_A 296 CIYRVDY 302 (433)
T ss_dssp EEEEEEB
T ss_pred EEEEEeC
Confidence 6666543
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.32 E-value=0.065 Score=47.34 Aligned_cols=149 Identities=7% Similarity=-0.097 Sum_probs=88.7
Q ss_pred ceeEEEEcCCCCEEEEE-eCCCeEEEEeCCC----CcceEEeecCCCCeEEEEEecCC-CEEEEecCCCeEEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVSLG-HSGGTVTMWKPTT----SALLIKMLYHQGPVSALAFHPNG-HLMATTGKECKIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg-~~dg~v~lwd~~~----~~~~~~~~~h~~~v~~l~~~p~g-~~l~s~~~d~~i~vwd~~~~~ 142 (359)
.+..++|++.+..|+.+ ..++.|..+++.. ......+........++++++.+ +++++-...+.|.++|+....
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 67899999966555554 4568999999876 22222232223456889998754 455555677899999987543
Q ss_pred eeEee---cCCceeEEEcCCC--cEEEEcC--CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-C
Q 040274 143 VLQTL---TGHAKTLDFSQKG--LLAVGTG--SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-M 214 (359)
Q Consensus 143 ~~~~~---~~~v~~~~~s~~g--l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-d 214 (359)
....+ ......++++|.+ ++.+..+ +.|..+++... ....+... .......++|+|++..|+.+.. .
T Consensus 111 ~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~--~~~~~~~~---~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 111 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLVTE---NIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--CEEEEECS---SCSCEEEEEEETTTTEEEEEETTT
T ss_pred eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC--CeEEEEEC---CCCCceEEEEeccCCEEEEEECCC
Confidence 22222 2356899999854 4444443 67888875322 22222111 1125788999998777665553 4
Q ss_pred CeEEEEEc
Q 040274 215 GWSGILVP 222 (359)
Q Consensus 215 g~~~i~~~ 222 (359)
+.+..+..
T Consensus 186 ~~I~~~d~ 193 (316)
T 1ijq_A 186 HSISSIDV 193 (316)
T ss_dssp TEEEEEET
T ss_pred CeEEEEec
Confidence 45555544
No 276
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.29 E-value=0.015 Score=58.45 Aligned_cols=141 Identities=11% Similarity=-0.007 Sum_probs=90.4
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee----cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeE
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML----YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~----~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~ 145 (359)
|.++...+++..|..|+.++-|.+||..++....-.. .+...|.++...++|.+.+... + -|.+||..++....
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEE
Confidence 5567777777756777777789999998775432211 1345789999999888766554 4 48899988765432
Q ss_pred ee---------cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccc---cccCCCCcceeEEEEccCCCEEEEEe
Q 040274 146 TL---------TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYM---GNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 146 ~~---------~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
.. ...|.++...++| +..++. +.|.+||.... .. .+. .....+...|.++...++|.+.+.+.
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~-~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL-DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT-EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC-eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 21 1357888899999 666666 66888885332 21 111 00011223688999988888655443
Q ss_pred CCCeE
Q 040274 213 SMGWS 217 (359)
Q Consensus 213 ~dg~~ 217 (359)
+|..
T Consensus 562 -~Gl~ 565 (795)
T 4a2l_A 562 -EGFY 565 (795)
T ss_dssp -SCEE
T ss_pred -CCce
Confidence 4643
No 277
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.28 E-value=0.002 Score=62.25 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=70.8
Q ss_pred EEEEEeCCCeEEEEeCCCCcceEEeecCC-------------CCe--------------------------EEEEEecCC
Q 040274 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQ-------------GPV--------------------------SALAFHPNG 121 (359)
Q Consensus 81 ~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-------------~~v--------------------------~~l~~~p~g 121 (359)
.++.++.+|.++++|..+++.+..+.... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56778889999999999998877654211 111 245788877
Q ss_pred CEEEEec-------------------------------------CCCeEEEEEcCCCeeeEeec--CCceeEEE-cCCC-
Q 040274 122 HLMATTG-------------------------------------KECKIKIWDLRKYEVLQTLT--GHAKTLDF-SQKG- 160 (359)
Q Consensus 122 ~~l~s~~-------------------------------------~d~~i~vwd~~~~~~~~~~~--~~v~~~~~-s~~g- 160 (359)
.+|+..+ .++.|..||+.+++.+..+. ..+.+..+ ..++
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~ 477 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGL 477 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTE
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCE
Confidence 7766543 35789999999999887773 23333222 2345
Q ss_pred cEEEEcCCcEEEEcCCCCCccccccc
Q 040274 161 LLAVGTGSFAQILGDFSGSHNYSRYM 186 (359)
Q Consensus 161 l~~~~~d~~i~v~d~~~~~~~~~~~~ 186 (359)
++.++.++.|++||..++ +.+-.+.
T Consensus 478 v~~g~~dg~l~a~D~~tG-~~lw~~~ 502 (571)
T 2ad6_A 478 VWYATLDGYLKALDNKDG-KELWNFK 502 (571)
T ss_dssp EEEECTTSEEEEEETTTC-CEEEEEE
T ss_pred EEEEcCCCeEEEEECCCC-CEEEEEe
Confidence 666778999999997665 4443333
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.26 E-value=0.0095 Score=58.54 Aligned_cols=72 Identities=7% Similarity=0.095 Sum_probs=48.8
Q ss_pred eEEEEcCCCCEEEEEeC-CCeEEEEeCCCCcceEEeecCCC-CeEEEEEecCCCEEEEec-CC-----CeEEEEEcCCCe
Q 040274 71 DLMRVNPFNGVVSLGHS-GGTVTMWKPTTSALLIKMLYHQG-PVSALAFHPNGHLMATTG-KE-----CKIKIWDLRKYE 142 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~~-dg~v~lwd~~~~~~~~~~~~h~~-~v~~l~~~p~g~~l~s~~-~d-----~~i~vwd~~~~~ 142 (359)
.++++.+++.++++|+. +..+.+||+.+.+....-..+.. .-.++++.++|++++.|| .+ ..+.+||..+..
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 34677788999999884 45899999887653322111222 224556667999999988 44 468999987654
No 279
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.25 E-value=0.014 Score=56.59 Aligned_cols=75 Identities=8% Similarity=0.086 Sum_probs=53.7
Q ss_pred EEEEcCCCCEEEEEeC--------------------C----CeEEEEeCCCCcceEEeec--CC--------CCeEEEEE
Q 040274 72 LMRVNPFNGVVSLGHS--------------------G----GTVTMWKPTTSALLIKMLY--HQ--------GPVSALAF 117 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~--------------------d----g~v~lwd~~~~~~~~~~~~--h~--------~~v~~l~~ 117 (359)
.++++|...+++.+.. | +.|..+|+.+++.+..+.. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4677787777776663 2 5899999999999888753 32 1221 122
Q ss_pred e-cCCC---EEEEecCCCeEEEEEcCCCeeeEee
Q 040274 118 H-PNGH---LMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 118 ~-p~g~---~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
. .+|+ .++.++.+|.++++|..+|+.+..+
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 2 4674 7888999999999999999887655
No 280
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.23 E-value=0.036 Score=49.94 Aligned_cols=93 Identities=13% Similarity=0.199 Sum_probs=57.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc--eEEee---cCCCCeEEEEEecC---CCEEEEecC-C-----CeEE
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSAL--LIKML---YHQGPVSALAFHPN---GHLMATTGK-E-----CKIK 134 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~--~~~~~---~h~~~v~~l~~~p~---g~~l~s~~~-d-----~~i~ 134 (359)
....|+|.|+|.++++ ..+|.|.+++ ++.. +..+. ........++|+|+ +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 6788999999985544 5669999998 3332 11111 12346789999998 444444333 2 6788
Q ss_pred EEEcCCCe-----ee-Eeec---C---CceeEEEcCCC-cEEE
Q 040274 135 IWDLRKYE-----VL-QTLT---G---HAKTLDFSQKG-LLAV 164 (359)
Q Consensus 135 vwd~~~~~-----~~-~~~~---~---~v~~~~~s~~g-l~~~ 164 (359)
.|+...+. .+ ..++ + ....++|+|+| ++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 88876431 22 2233 1 24789999999 4433
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.19 E-value=0.017 Score=55.97 Aligned_cols=75 Identities=9% Similarity=0.059 Sum_probs=54.4
Q ss_pred EEEEcCCCCEEEEEeCC----------------CeEEEEeCCCCcceEEeecCCC----------CeEEEEEe-cCC---
Q 040274 72 LMRVNPFNGVVSLGHSG----------------GTVTMWKPTTSALLIKMLYHQG----------PVSALAFH-PNG--- 121 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~d----------------g~v~lwd~~~~~~~~~~~~h~~----------~v~~l~~~-p~g--- 121 (359)
.+++.+...+++.++.+ ++|..+|+.|++.+..+..... ++. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 45677777788877765 3899999999999888764221 121 2222 467
Q ss_pred CEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 122 HLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 122 ~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
..++.++.+|.++++|..+|+.+...
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeecc
Confidence 46778899999999999999887655
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.18 E-value=0.11 Score=45.94 Aligned_cols=150 Identities=10% Similarity=-0.066 Sum_probs=87.2
Q ss_pred ceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec--CCCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNG-VVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG--KECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~-~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~--~d~~i~vwd~~~~~~~~ 145 (359)
....+++++.+. ++++-...+.|.++++........+.........++++|.+.+|+.+. ..+.|..+++.. ....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~ 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRF 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeE
Confidence 456788887444 444445667899999875433332323445678999999765655554 357888888863 2222
Q ss_pred ee-c---CCceeEEEcCCC--c-EEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEE
Q 040274 146 TL-T---GHAKTLDFSQKG--L-LAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSG 218 (359)
Q Consensus 146 ~~-~---~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~ 218 (359)
.+ . ...+.++|++++ + ++-+..+.|..+|+... ....+... .......+++. .+.++.+-...+.+.
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~---~~~~P~glav~-~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQAVVKG---SLPHPFALTLF-EDILYWTDWSTHSIL 232 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECS---CCSCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC--ceEEEecC---CCCCceEEEEe-CCEEEEEecCCCeEE
Confidence 22 2 245899999865 4 44444678999985422 22222211 11235666764 334444555566666
Q ss_pred EEEcCCC
Q 040274 219 ILVPRSS 225 (359)
Q Consensus 219 i~~~gs~ 225 (359)
.+...++
T Consensus 233 ~~~~~~G 239 (318)
T 3sov_A 233 ACNKYTG 239 (318)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 6665444
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.16 E-value=0.094 Score=48.07 Aligned_cols=148 Identities=5% Similarity=-0.094 Sum_probs=90.2
Q ss_pred ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCC----cceEEeecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTTS----ALLIKMLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~----~~~~~~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~ 142 (359)
.+..|+|++.+..|+.+. .++.|+.+++... .....+.........+++++ .++++++-...+.|.+.|+....
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~ 192 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 192 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc
Confidence 688999999666665554 5678999998752 22333333445678899998 45555565667899999987543
Q ss_pred eeEeec---CCceeEEEcCCC--cEEEEc--CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-C
Q 040274 143 VLQTLT---GHAKTLDFSQKG--LLAVGT--GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-M 214 (359)
Q Consensus 143 ~~~~~~---~~v~~~~~s~~g--l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-d 214 (359)
....+. .....|+++|.+ ++.+.. .+.|..+++... ....+... .-.....|+++|++..|+.+.. .
T Consensus 193 ~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~--~~~~~~~~---~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 193 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLVTE---NIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC--SCEEEECS---SCSCEEEEEEETTTTEEEEEETTT
T ss_pred eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC--ccEEEEEC---CCCceEEEEEEeCCCEEEEEECCC
Confidence 322222 346889999854 444432 367888885332 22222111 1125788999998877766643 4
Q ss_pred CeEEEEE
Q 040274 215 GWSGILV 221 (359)
Q Consensus 215 g~~~i~~ 221 (359)
+.|..+.
T Consensus 268 ~~I~~~d 274 (400)
T 3p5b_L 268 HSISSID 274 (400)
T ss_dssp TEEEEEE
T ss_pred CEEEEEe
Confidence 4454444
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.11 E-value=0.16 Score=46.46 Aligned_cols=150 Identities=13% Similarity=-0.024 Sum_probs=84.9
Q ss_pred ceeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC--CCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPF-NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK--ECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~-~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~--d~~i~vwd~~~~~~~~ 145 (359)
....|++++. +.++++-...+.|.+.++........+........+|+++|.+.+|+.+.. .+.|...++.......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 4567888874 444444456778989888755443334334455789999996666555542 3678888887433222
Q ss_pred eec---CCceeEEEcCCC--cEEE-EcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEE
Q 040274 146 TLT---GHAKTLDFSQKG--LLAV-GTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGI 219 (359)
Q Consensus 146 ~~~---~~v~~~~~s~~g--l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i 219 (359)
.+. ...+.|++++++ ++.+ +..+.|..+|+... ....+..... .-.....+++. .+.++.+-...+.+..
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~~-~l~~P~gl~v~-~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEK-RLAHPFSLAVF-EDKVFWTDIINEAIFS 315 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--CCEEEEECSS-TTSSEEEEEEE-TTEEEEEESSSCSEEE
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC--ccEEEEeCCC-CCCCCEEEEEe-CCEEEEecCCCCeEEE
Confidence 222 356899999876 4433 34578999985332 2222221100 11134566652 3334444445555555
Q ss_pred EEc
Q 040274 220 LVP 222 (359)
Q Consensus 220 ~~~ 222 (359)
+..
T Consensus 316 ~~~ 318 (400)
T 3p5b_L 316 ANR 318 (400)
T ss_dssp EES
T ss_pred EEc
Confidence 553
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.10 E-value=0.13 Score=45.34 Aligned_cols=151 Identities=12% Similarity=-0.046 Sum_probs=87.0
Q ss_pred ceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC-C-CeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVV-SLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK-E-CKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l-~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~-d-~~i~vwd~~~~~~~~ 145 (359)
....|++++.+..| ++-..++.|.++++........+........+++++|.+..|+.+.. . +.|..+++.. ....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeE
Confidence 45678887754444 44456788999998754333223333456789999996665555443 2 6888888863 3333
Q ss_pred ee----cCCceeEEEcCCC--cE-EEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEE
Q 040274 146 TL----TGHAKTLDFSQKG--LL-AVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSG 218 (359)
Q Consensus 146 ~~----~~~v~~~~~s~~g--l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~ 218 (359)
.+ -...+.++|++++ ++ +-+..+.|..+|+... ....+..... .......+++. .+.++.+-...+.+.
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~--~~~~~~~~~~-~~~~P~giav~-~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEK-RLAHPFSLAVF-EDKVFWTDIINEAIF 232 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECTT-TTSSEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC--ceEEEeecCC-ccCCcEEEEEE-CCEEEEEECCCCeEE
Confidence 33 2346899999876 44 4444578999995422 2222221100 11135667774 344445555566666
Q ss_pred EEEcCC
Q 040274 219 ILVPRS 224 (359)
Q Consensus 219 i~~~gs 224 (359)
.+...+
T Consensus 233 ~~~~~~ 238 (316)
T 1ijq_A 233 SANRLT 238 (316)
T ss_dssp EEETTT
T ss_pred EEeCCC
Confidence 665533
No 286
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.06 E-value=0.016 Score=48.13 Aligned_cols=133 Identities=11% Similarity=-0.042 Sum_probs=78.7
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc------ceEEeecC--CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee-----
Q 040274 77 PFNGVVSLGHSGGTVTMWKPTTSA------LLIKMLYH--QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV----- 143 (359)
Q Consensus 77 p~~~~l~tg~~dg~v~lwd~~~~~------~~~~~~~h--~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~----- 143 (359)
|...+|+....| +|+.=.+.++. ....+ ++ -..+..++|+|+|.+.+. .+|.++-.+..+...
T Consensus 2 ~~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~ 77 (236)
T 1tl2_A 2 GGESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG 77 (236)
T ss_dssp CCCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH
T ss_pred CcceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc
Confidence 345567777777 76665555443 11222 33 247789999999987666 777777777654221
Q ss_pred -eEee-c-C--CceeEEEcCCC-cEEEEcCCcEEEEcCCCCCcccccccccc-CC-CCcceeEEEEccCCCEEEEEeCCC
Q 040274 144 -LQTL-T-G--HAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYMGNS-MV-KGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 144 -~~~~-~-~--~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
-..+ . + .-.++.|.|+| |+++ .||.|+-++..+.....-...... +. .-..+..|.|+|+|.+.++. ++
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 1111 0 0 02688999999 5555 779998887443322211111100 00 11258999999999988777 65
Q ss_pred e
Q 040274 216 W 216 (359)
Q Consensus 216 ~ 216 (359)
.
T Consensus 155 ~ 155 (236)
T 1tl2_A 155 Q 155 (236)
T ss_dssp E
T ss_pred c
Confidence 4
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.05 E-value=0.15 Score=45.16 Aligned_cols=107 Identities=9% Similarity=0.014 Sum_probs=76.6
Q ss_pred eeEEEE---cCCCCEEEEEeC-------------CCeEEEEeCC---CCcceEEee--cC-----------CCCeEEEEE
Q 040274 70 TDLMRV---NPFNGVVSLGHS-------------GGTVTMWKPT---TSALLIKML--YH-----------QGPVSALAF 117 (359)
Q Consensus 70 v~~l~~---sp~~~~l~tg~~-------------dg~v~lwd~~---~~~~~~~~~--~h-----------~~~v~~l~~ 117 (359)
+..|.| .|++.++++... +..|..||+. +++.+.... .. ....+.++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 578999 688777775442 5779999999 787765543 11 124789999
Q ss_pred ecCCCEEEEecCC-CeEEEEEcCCCeeeEee---c------CCceeEEEcCCC--cEEEEcCCcEEEEcCCC
Q 040274 118 HPNGHLMATTGKE-CKIKIWDLRKYEVLQTL---T------GHAKTLDFSQKG--LLAVGTGSFAQILGDFS 177 (359)
Q Consensus 118 ~p~g~~l~s~~~d-~~i~vwd~~~~~~~~~~---~------~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~ 177 (359)
.++|+..++++.- +.|...|.... .+..+ . ...+.|+++|+| |++...++.|..+|+..
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 9999999988887 88887776633 22222 1 115799999999 55555689999999763
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.01 E-value=0.036 Score=52.20 Aligned_cols=149 Identities=9% Similarity=0.029 Sum_probs=88.2
Q ss_pred ceeEEEEcCC-CCEEEEE-eCCCeEEEEeCCCCcceEEeecC---CCCeEEEEE-------ecCCCEEEEecCCC-----
Q 040274 69 RTDLMRVNPF-NGVVSLG-HSGGTVTMWKPTTSALLIKMLYH---QGPVSALAF-------HPNGHLMATTGKEC----- 131 (359)
Q Consensus 69 ~v~~l~~sp~-~~~l~tg-~~dg~v~lwd~~~~~~~~~~~~h---~~~v~~l~~-------~p~g~~l~s~~~d~----- 131 (359)
....|+|+|. +..|+.+ ...+.|++.|+.++.....+... ......++| +++|.+|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999993 4444444 44467889998876544333221 224789999 99999666655443
Q ss_pred --eEEEEEcCC-Ceee-----Eee--cCCceeEEEcCC-C-cEEEE-cCCcEEEEcCC-------CCCcc----------
Q 040274 132 --KIKIWDLRK-YEVL-----QTL--TGHAKTLDFSQK-G-LLAVG-TGSFAQILGDF-------SGSHN---------- 181 (359)
Q Consensus 132 --~i~vwd~~~-~~~~-----~~~--~~~v~~~~~s~~-g-l~~~~-~d~~i~v~d~~-------~~~~~---------- 181 (359)
.|.+++... +... ..+ -.+...++++|+ + |+.+. .++.|..||+. +. ..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg-~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG-GSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT-CCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc-eeeccccccccc
Confidence 366776443 2221 122 235678899995 4 55544 45779999965 22 22
Q ss_pred -ccccccccCCCCcceeEEEEccCCCEEEEEe-CCCeEEEE
Q 040274 182 -YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SMGWSGIL 220 (359)
Q Consensus 182 -~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~dg~~~i~ 220 (359)
...+.... .......++|+|+|++|+++. ..+.|+.+
T Consensus 299 ~~~~l~~~~--~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 299 TFKQLFTIA--DPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp TEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ccceeEecC--CCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 01111111 223467899999999655554 45555554
No 289
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.01 E-value=0.0079 Score=59.30 Aligned_cols=129 Identities=15% Similarity=0.184 Sum_probs=78.6
Q ss_pred EEEEEeCCCeEEEEeCCCCcceEEeecCC-----------C-Ce------------------------EEEEEecCCCEE
Q 040274 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQ-----------G-PV------------------------SALAFHPNGHLM 124 (359)
Q Consensus 81 ~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-----------~-~v------------------------~~l~~~p~g~~l 124 (359)
.++.++.+|.++++|..+|+.+....... + ++ ..++++|+..++
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 57888899999999999998874432111 0 00 126778876665
Q ss_pred EEe------------------------------------cCCCeEEEEEcCCCeeeEeec--CCceeEEEcC-CC-cEEE
Q 040274 125 ATT------------------------------------GKECKIKIWDLRKYEVLQTLT--GHAKTLDFSQ-KG-LLAV 164 (359)
Q Consensus 125 ~s~------------------------------------~~d~~i~vwd~~~~~~~~~~~--~~v~~~~~s~-~g-l~~~ 164 (359)
+.. ..+|.|..||+.+++.+..+. .+.....+.. .+ ++++
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g 475 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG 475 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE
Confidence 531 134889999999999887763 3333333333 34 6677
Q ss_pred EcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCC-EEEEEeC
Q 040274 165 GTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYED-VLGIGHS 213 (359)
Q Consensus 165 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~g~~ 213 (359)
+.++.|++||..++ +.+..+........ .-+.+..+|+ ++++++.
T Consensus 476 ~~dg~l~a~d~~tG-~~l~~~~~~~~~~~---~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 476 TAAGQMHAYSADKG-EALWQFEAQSGIVA---APMTFELAGRQYVAIMAG 521 (668)
T ss_dssp CTTSEEEEEETTTC-CEEEEEECSSCCCS---CCEEEEETTEEEEEEEEC
T ss_pred CCcccchhhhhhcC-hhheEecCCCCccc---CceEEEECCEEEEEEEec
Confidence 78999999996555 44444433322112 2234455665 5555543
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.97 E-value=0.036 Score=52.17 Aligned_cols=105 Identities=12% Similarity=0.045 Sum_probs=66.0
Q ss_pred ceeEEEE-------cCCCCEEEEEeCCC-------eEEEEeCCC-Ccce-----EEeecCCCCeEEEEEec-CCCEEEEe
Q 040274 69 RTDLMRV-------NPFNGVVSLGHSGG-------TVTMWKPTT-SALL-----IKMLYHQGPVSALAFHP-NGHLMATT 127 (359)
Q Consensus 69 ~v~~l~~-------sp~~~~l~tg~~dg-------~v~lwd~~~-~~~~-----~~~~~h~~~v~~l~~~p-~g~~l~s~ 127 (359)
....|+| ++++.+|+++...+ .|.+++... +... ..+.. ....++++++| ++.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEE
Confidence 3688999 99998666665543 366665443 2221 22221 12346788899 56666777
Q ss_pred cCCCeEEEEEcC-------CCee--------------eEeec--CCceeEEEcCCC--cEEE-EcCCcEEEEc
Q 040274 128 GKECKIKIWDLR-------KYEV--------------LQTLT--GHAKTLDFSQKG--LLAV-GTGSFAQILG 174 (359)
Q Consensus 128 ~~d~~i~vwd~~-------~~~~--------------~~~~~--~~v~~~~~s~~g--l~~~-~~d~~i~v~d 174 (359)
..++.|..+|+. ++.. +.... .....|+|+|+| ++.+ +..+.|+.++
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 788899999997 4443 22222 335789999999 3333 3457788865
No 291
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.93 E-value=0.059 Score=48.57 Aligned_cols=94 Identities=13% Similarity=0.135 Sum_probs=57.0
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-ceEEe---ecCCCCeEEEEEecC---CCEEEEecC----C----CeE
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA-LLIKM---LYHQGPVSALAFHPN---GHLMATTGK----E----CKI 133 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~-~~~~~---~~h~~~v~~l~~~p~---g~~l~s~~~----d----~~i 133 (359)
....|+|.|+|.++ ++..+|.|.+++. ++. .+..+ .........|+|+|+ +..|+.+.. + ..|
T Consensus 30 ~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYL-VTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEE-EEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 57889999998744 4556699999974 343 22221 112345789999997 444444332 3 568
Q ss_pred EEEEcCCC-------eee-Eeec---C-CceeEEEcCCC-cEEE
Q 040274 134 KIWDLRKY-------EVL-QTLT---G-HAKTLDFSQKG-LLAV 164 (359)
Q Consensus 134 ~vwd~~~~-------~~~-~~~~---~-~v~~~~~s~~g-l~~~ 164 (359)
..|+.... +.+ ..++ . ....+.|.|+| |+.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 88887643 112 1232 1 24789999999 4433
No 292
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.89 E-value=0.097 Score=46.92 Aligned_cols=140 Identities=11% Similarity=0.102 Sum_probs=80.7
Q ss_pred cceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce--EEe----ecCCCCeEEEEEecC----CCEEEEe--cCCCeEEE
Q 040274 68 RRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL--IKM----LYHQGPVSALAFHPN----GHLMATT--GKECKIKI 135 (359)
Q Consensus 68 ~~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~--~~~----~~h~~~v~~l~~~p~----g~~l~s~--~~d~~i~v 135 (359)
.....|+|.|+|.++++-...|.|++++..++... ..+ ....+....|+|+|+ +.+.++- ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 36789999999987777655899999987655432 111 123456789999995 4443331 24556777
Q ss_pred EEcCCC----------eeeE-eec---CC-ceeEEEcCCC--cEEEEc-------------CCcEEEEcCCCCCc-----
Q 040274 136 WDLRKY----------EVLQ-TLT---GH-AKTLDFSQKG--LLAVGT-------------GSFAQILGDFSGSH----- 180 (359)
Q Consensus 136 wd~~~~----------~~~~-~~~---~~-v~~~~~s~~g--l~~~~~-------------d~~i~v~d~~~~~~----- 180 (359)
|.+..+ +.+. .++ .| ...|.|.|+| +++.+. .+.|.-++....-.
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 766541 1222 222 12 3679999999 444332 24454445321100
Q ss_pred -ccccc-ccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 181 -NYSRY-MGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 181 -~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
....+ .+|. ....++|+|+|.+.++-.
T Consensus 192 ~~~~i~a~G~R-----Np~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 192 PGSPVYSYGHR-----NVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp TTCCEEEBCCS-----BCCEEEECTTCCEEEEEC
T ss_pred CCCeEEeeCCC-----CcceEEECCCCCEEEEec
Confidence 00111 1222 367899999987666544
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.85 E-value=0.13 Score=46.11 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=68.6
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCC---CCEEEEEeC-C-----CeEEEEeCC
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPF---NGVVSLGHS-G-----GTVTMWKPT 97 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~---~~~l~tg~~-d-----g~v~lwd~~ 97 (359)
+.|+|.|||+++++-.. ....|+|+|+ +..|+++.. + +.|..|+..
T Consensus 34 ~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 34 WALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred eEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 89999999997765422 4578899998 555555443 2 578888876
Q ss_pred CCc-----ceEE-ee---cCCCCeEEEEEecCCCEEEEecC-------------CCeEEEEEcCCC------------e-
Q 040274 98 TSA-----LLIK-ML---YHQGPVSALAFHPNGHLMATTGK-------------ECKIKIWDLRKY------------E- 142 (359)
Q Consensus 98 ~~~-----~~~~-~~---~h~~~v~~l~~~p~g~~l~s~~~-------------d~~i~vwd~~~~------------~- 142 (359)
.+. .+.. +. +.......++|.|+|.++++.+. .+.|..+|.... .
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~ 193 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGAR 193 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCC
Confidence 431 1211 22 11112368999999987777542 256666665430 0
Q ss_pred -eeEee-cCCceeEEEcC-CC-cEEEEc
Q 040274 143 -VLQTL-TGHAKTLDFSQ-KG-LLAVGT 166 (359)
Q Consensus 143 -~~~~~-~~~v~~~~~s~-~g-l~~~~~ 166 (359)
.+... -.....++|+| +| ++++..
T Consensus 194 ~~i~a~G~rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 194 PEVYSLGHRNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp TTEEEECCSEECCCEECTTTCCEEEEEE
T ss_pred ccEEEEcCCCcccEEEECCCCCEEEEEc
Confidence 11111 12357899999 66 555544
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.82 E-value=0.0086 Score=57.98 Aligned_cols=123 Identities=9% Similarity=0.081 Sum_probs=75.8
Q ss_pred EEEEEeCCCeEEEEeCCCCcceEEeecCC-------------CCe--------------------------------EEE
Q 040274 81 VVSLGHSGGTVTMWKPTTSALLIKMLYHQ-------------GPV--------------------------------SAL 115 (359)
Q Consensus 81 ~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-------------~~v--------------------------------~~l 115 (359)
.++.++.+|.++++|..+++.+..+.... .++ ..+
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~ 417 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPM 417 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCC
T ss_pred EEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCc
Confidence 67888999999999999998877654321 000 134
Q ss_pred EEecCCCEEEEec---------------------------------CCCeEEEEEcCCCeeeEeec--CCcee-EEEcCC
Q 040274 116 AFHPNGHLMATTG---------------------------------KECKIKIWDLRKYEVLQTLT--GHAKT-LDFSQK 159 (359)
Q Consensus 116 ~~~p~g~~l~s~~---------------------------------~d~~i~vwd~~~~~~~~~~~--~~v~~-~~~s~~ 159 (359)
+++|+..++++.. .+|.|..||+.+++.+..++ .++.. ......
T Consensus 418 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag 497 (582)
T 1flg_A 418 AYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAG 497 (582)
T ss_dssp EECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETT
T ss_pred eECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCC
Confidence 5666544444322 36889999999999877763 22222 112235
Q ss_pred C-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCE
Q 040274 160 G-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDV 207 (359)
Q Consensus 160 g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 207 (359)
| ++.++.|+.++.||..++ +.+-.+..... ....-+.|..+|+.
T Consensus 498 glvf~g~~dg~l~A~D~~tG-~~lW~~~~~~g---~~a~P~~y~~~G~q 542 (582)
T 1flg_A 498 NLVFTGTGDGYFKAFDAKSG-KELWKFQTGSG---IVSPPITWEQDGEQ 542 (582)
T ss_dssp TEEEEECTTSEEEEEETTTC-CEEEEEECSSC---CCSCCEEEEETTEE
T ss_pred CEEEEECCCCcEEEEECCCC-CEEEEecCCCC---cccCceEEEECCEE
Confidence 5 667788999999997665 44433333321 11122556667753
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.79 E-value=0.066 Score=48.17 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=77.5
Q ss_pred eeEEEEcC--CCC--EEEEEeC--CCeEEEEeCCCCcc----eEEeecC-CCCeEEEEEecCCCEEEEecC---------
Q 040274 70 TDLMRVNP--FNG--VVSLGHS--GGTVTMWKPTTSAL----LIKMLYH-QGPVSALAFHPNGHLMATTGK--------- 129 (359)
Q Consensus 70 v~~l~~sp--~~~--~l~tg~~--dg~v~lwd~~~~~~----~~~~~~h-~~~v~~l~~~p~g~~l~s~~~--------- 129 (359)
...|.+.+ ++. ++++-+. +.+|.+|++..... +..+.+. -...+.+.+.++|.++++...
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 34555544 343 3344333 46777877654322 2223222 235789999999988777541
Q ss_pred --------CCeEEEEEcCCCeeeEeecCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCccc--cccccccCCCCcce
Q 040274 130 --------ECKIKIWDLRKYEVLQTLTGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNY--SRYMGNSMVKGYQI 196 (359)
Q Consensus 130 --------d~~i~vwd~~~~~~~~~~~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~~~~v 196 (359)
.|.|+.||...-+.+..--...+.++||||| +++-+..+.|..|++...+... ..+ .. ....
T Consensus 194 ~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~----~g~P 268 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF----DTLV 268 (355)
T ss_dssp HHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC----SSEE
T ss_pred chhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC----CCCC
Confidence 2556666653212111112346899999999 3444456899999965332221 112 11 1246
Q ss_pred eEEEEcc-CCCEEEEEeCC
Q 040274 197 GKVSFRP-YEDVLGIGHSM 214 (359)
Q Consensus 197 ~~~~~sp-~~~~l~~g~~d 214 (359)
-.+++.+ +|++.+++..+
T Consensus 269 DGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEECTTTCCEEEEEESC
T ss_pred ceEEEeCCCCcEEEEecCC
Confidence 7788888 48766655533
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.76 E-value=0.26 Score=43.50 Aligned_cols=148 Identities=9% Similarity=-0.018 Sum_probs=88.9
Q ss_pred ceeEEEEcCCCCEEEEE-eCCCeEEEEeCCCCcce-EEeecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVVSLG-HSGGTVTMWKPTTSALL-IKMLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg-~~dg~v~lwd~~~~~~~-~~~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~~~~ 145 (359)
.+.+++|++.+..|+.+ ..++.|..+++..+... ..+........++++++ ++.++++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 67789999955555444 46788999998866322 22222334567899987 45555565667889999987532221
Q ss_pred ee---cCCceeEEEcCC-C-cEEEEc--CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeE
Q 040274 146 TL---TGHAKTLDFSQK-G-LLAVGT--GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWS 217 (359)
Q Consensus 146 ~~---~~~v~~~~~s~~-g-l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~ 217 (359)
.+ ......++++|. | ++.+.. .+.|..+++... ....+... .-.....++|+|++..|+.+.. .+.|
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~~~~---~l~~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--SRFIIINS---EIYWPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC--SCEEEECS---SCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC--CeEEEEEC---CCCCccEEEEeccCCEEEEEECCCCEE
Confidence 12 234688999986 4 444442 467888875322 22222111 1124688999997776665543 4445
Q ss_pred EEEE
Q 040274 218 GILV 221 (359)
Q Consensus 218 ~i~~ 221 (359)
..+.
T Consensus 191 ~~~d 194 (318)
T 3sov_A 191 HKSN 194 (318)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 4443
No 297
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.67 E-value=0.14 Score=47.89 Aligned_cols=97 Identities=18% Similarity=0.276 Sum_probs=56.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcce--EEeec------CCCCeEEEEEecC---CCEEEEecC--------
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALL--IKMLY------HQGPVSALAFHPN---GHLMATTGK-------- 129 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~--~~~~~------h~~~v~~l~~~p~---g~~l~s~~~-------- 129 (359)
..+.|+|.|+|.++++-...+.|.+++..++... ..+.. ..+.+..|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 5678999999887766544457888876555432 22211 2456779999994 444443332
Q ss_pred -----CCeEEEEEcCCC-------eeeE-eec---CC-ceeEEEcCCC--cEEEE
Q 040274 130 -----ECKIKIWDLRKY-------EVLQ-TLT---GH-AKTLDFSQKG--LLAVG 165 (359)
Q Consensus 130 -----d~~i~vwd~~~~-------~~~~-~~~---~~-v~~~~~s~~g--l~~~~ 165 (359)
...|..|++... +.+. .++ .| ...|.|.|+| +++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665421 1222 122 12 5789999999 44443
No 298
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.63 E-value=0.024 Score=51.91 Aligned_cols=103 Identities=14% Similarity=0.225 Sum_probs=68.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----------c--eEEeec------CCCCeEEEEEec---CCCEEEEe
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA----------L--LIKMLY------HQGPVSALAFHP---NGHLMATT 127 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~----------~--~~~~~~------h~~~v~~l~~~p---~g~~l~s~ 127 (359)
.+..+..||+|.+|+..+. ..|.|-.+..+. . ...+.- ...+|..+-||| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4666777888877777643 466666655221 0 112221 256799999999 56789999
Q ss_pred cCCCeEEEEEcCCC--eeeEee-------c-----CCceeEEEcCCC--cEEEE--cCCcEEEE
Q 040274 128 GKECKIKIWDLRKY--EVLQTL-------T-----GHAKTLDFSQKG--LLAVG--TGSFAQIL 173 (359)
Q Consensus 128 ~~d~~i~vwd~~~~--~~~~~~-------~-----~~v~~~~~s~~g--l~~~~--~d~~i~v~ 173 (359)
..|+.|++||+... ++. .+ . ..+.+++|+++| +++.+ .+|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999852 222 22 1 347899999988 56644 66777644
No 299
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.60 E-value=0.021 Score=55.38 Aligned_cols=124 Identities=11% Similarity=0.016 Sum_probs=75.8
Q ss_pred CEEEEEeCCCeEEEEeCCCCcceEEeecCC-------------CCe--------------------------EEEEEecC
Q 040274 80 GVVSLGHSGGTVTMWKPTTSALLIKMLYHQ-------------GPV--------------------------SALAFHPN 120 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~-------------~~v--------------------------~~l~~~p~ 120 (359)
..++.++.+|.++++|..+++.+....... .++ ..++++|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 467778899999999999998877654211 111 24567776
Q ss_pred CCEEEEe---------------------------------c------CCCeEEEEEcCCCeeeEeec--CCce-eEEEcC
Q 040274 121 GHLMATT---------------------------------G------KECKIKIWDLRKYEVLQTLT--GHAK-TLDFSQ 158 (359)
Q Consensus 121 g~~l~s~---------------------------------~------~d~~i~vwd~~~~~~~~~~~--~~v~-~~~~s~ 158 (359)
..++++. + .+|.|..||+.+++.+...+ .+.. ......
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta 483 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATA 483 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEET
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEec
Confidence 5555442 1 34789999999999877773 2222 212223
Q ss_pred CC-cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCE
Q 040274 159 KG-LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDV 207 (359)
Q Consensus 159 ~g-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 207 (359)
.| ++.++.|+.++.||..++ +.+-.+..... ....-+.|..+|+.
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG-~~lW~~~l~~g---~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTG-DLLWKFKIPSG---AIGYPMTYTHKGTQ 529 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTC-CEEEEEECSSC---CCSCCEEEEETTEE
T ss_pred CCEEEEECCCCeEEEEECCCC-CEEEEeeCCCC---cEeccEEEEeCCEE
Confidence 45 666788999999997665 44433332221 11223455566653
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.57 E-value=0.098 Score=47.04 Aligned_cols=101 Identities=16% Similarity=0.205 Sum_probs=57.2
Q ss_pred EEeccceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--ceEEe----ecCCCCeEEEEEecC----CCEEEEecC----
Q 040274 64 AVAGRRTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSA--LLIKM----LYHQGPVSALAFHPN----GHLMATTGK---- 129 (359)
Q Consensus 64 ~~~~~~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~--~~~~~----~~h~~~v~~l~~~p~----g~~l~s~~~---- 129 (359)
+.+-.....|+|.|+|..|+++...|.|++++..... .+..+ ....+....++|+|+ +.+.++-+.
T Consensus 14 a~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 14 QDKLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp EEEESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred ECCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 3333367899999999834445567999999854221 11111 112345689999995 444444222
Q ss_pred ---CCeEEEEEcCCC-------eee-EeecC-----C-ceeEEEcCCC-cEEE
Q 040274 130 ---ECKIKIWDLRKY-------EVL-QTLTG-----H-AKTLDFSQKG-LLAV 164 (359)
Q Consensus 130 ---d~~i~vwd~~~~-------~~~-~~~~~-----~-v~~~~~s~~g-l~~~ 164 (359)
...|..|++... +.+ ..++. | ...+.|.|+| |+.+
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA 146 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence 235777766532 111 11221 1 4689999999 4444
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.46 E-value=0.21 Score=44.82 Aligned_cols=127 Identities=7% Similarity=0.066 Sum_probs=71.9
Q ss_pred CCCeEEEEeCCCC--cce-EEeec-----CCCCeEEEEEec--CCC-EEEEec-C--CCeEEEEEcCCC--e--eeEeec
Q 040274 87 SGGTVTMWKPTTS--ALL-IKMLY-----HQGPVSALAFHP--NGH-LMATTG-K--ECKIKIWDLRKY--E--VLQTLT 148 (359)
Q Consensus 87 ~dg~v~lwd~~~~--~~~-~~~~~-----h~~~v~~l~~~p--~g~-~l~s~~-~--d~~i~vwd~~~~--~--~~~~~~ 148 (359)
.+|.|.++|+.+. +.. ..+.+ .......+.+.+ ++. +|+.+. . +.+|.+|++... . .+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998743 211 12222 224667888766 454 344442 2 467888877653 2 233443
Q ss_pred C----CceeEEEcCCC-cEEEEc------------------CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCC
Q 040274 149 G----HAKTLDFSQKG-LLAVGT------------------GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYE 205 (359)
Q Consensus 149 ~----~v~~~~~s~~g-l~~~~~------------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 205 (359)
+ ..+++.+.++| +++++. .+.|..||. . . .......- ...+.++|+||+
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~-~~~~~~~l----~~pNGia~spDg 232 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N-D-VRVVAEGF----DFANGINISPDG 232 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-C-CEEEEEEE----SSEEEEEECTTS
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C-e-EEEeecCC----cccCcceECCCC
Confidence 2 35889999999 555542 134555653 1 2 22222211 146889999999
Q ss_pred CEEEEEeC-CCeEEEEE
Q 040274 206 DVLGIGHS-MGWSGILV 221 (359)
Q Consensus 206 ~~l~~g~~-dg~~~i~~ 221 (359)
+.|+++.. .+.+..|.
T Consensus 233 ~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYE 249 (355)
T ss_dssp SEEEEEEGGGTEEEEEE
T ss_pred CEEEEEeCCCCeEEEEE
Confidence 88776654 45554443
No 302
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.40 E-value=0.033 Score=54.71 Aligned_cols=108 Identities=14% Similarity=0.202 Sum_probs=70.1
Q ss_pred eEEEEcC-CCCEEEEEeCCC-----------eEEEEeCCCCcc--eEEee-cCCCCeEEEEEecCCCEEEEecC-CCeEE
Q 040274 71 DLMRVNP-FNGVVSLGHSGG-----------TVTMWKPTTSAL--LIKML-YHQGPVSALAFHPNGHLMATTGK-ECKIK 134 (359)
Q Consensus 71 ~~l~~sp-~~~~l~tg~~dg-----------~v~lwd~~~~~~--~~~~~-~h~~~v~~l~~~p~g~~l~s~~~-d~~i~ 134 (359)
..+++.| ++.+++.|+.+. .+.+||+.+++. +..+. .+.....++++.+++.+++.||. +..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3566777 788888887542 588999988753 22332 23334456788899999999984 56899
Q ss_pred EEEcCCCeeeE--eecCC--ceeEEEcCCC--cEEEE-cC-----CcEEEEcCCCC
Q 040274 135 IWDLRKYEVLQ--TLTGH--AKTLDFSQKG--LLAVG-TG-----SFAQILGDFSG 178 (359)
Q Consensus 135 vwd~~~~~~~~--~~~~~--v~~~~~s~~g--l~~~~-~d-----~~i~v~d~~~~ 178 (359)
+||..+..-.. .+... -.+++..++| ++.++ .+ ..+.+||..+.
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 99998765322 22211 2345666777 55555 23 57899997543
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.37 E-value=0.38 Score=48.13 Aligned_cols=139 Identities=6% Similarity=-0.097 Sum_probs=83.4
Q ss_pred ceeEEEEcCCCCEEE-EEeCCCeEEEEeCCCC----cceEEeecCCCCeEEEEEecCCCE-EEEecCCCeEEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVS-LGHSGGTVTMWKPTTS----ALLIKMLYHQGPVSALAFHPNGHL-MATTGKECKIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~-tg~~dg~v~lwd~~~~----~~~~~~~~h~~~v~~l~~~p~g~~-l~s~~~d~~i~vwd~~~~~ 142 (359)
.+..|+|++.+..|+ +-...+.|+.+++... .....+........+|++++.+.. +++-...+.|.+.++....
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~ 504 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 504 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe
Confidence 678899998555554 4445678998988752 223333334456678999987654 4555567899999987543
Q ss_pred eeEee---cCCceeEEEcCC-C-cEEEEcC--CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 143 VLQTL---TGHAKTLDFSQK-G-LLAVGTG--SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 143 ~~~~~---~~~v~~~~~s~~-g-l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
....+ -.....|+++|. | |+.+..+ +.|.+.++... ....+... .......|++++.+..|+.+.
T Consensus 505 ~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~--~~~~lv~~---~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 505 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLVTE---NIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--CEEEEECS---SCSCEEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC--ceEEEEeC---CCCCceEEEEecCCCeEEEEe
Confidence 32222 234689999987 4 4444432 67888875322 22222221 112577888887776666554
No 304
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.37 E-value=0.96 Score=45.27 Aligned_cols=108 Identities=15% Similarity=0.035 Sum_probs=69.4
Q ss_pred ceeEEEEcCCCCEEE-EEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC--CCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVVS-LGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK--ECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~-tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~--d~~i~vwd~~~~~~~~ 145 (359)
....|++++.+..|+ +-...+.|.+.++........+........+|+++|.+.+|+.+.. .+.|.+.++.......
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 456888888665444 4456788999998754433333334456789999997656555543 3678888887433322
Q ss_pred eec---CCceeEEEcCCC--cEEE-EcCCcEEEEcCC
Q 040274 146 TLT---GHAKTLDFSQKG--LLAV-GTGSFAQILGDF 176 (359)
Q Consensus 146 ~~~---~~v~~~~~s~~g--l~~~-~~d~~i~v~d~~ 176 (359)
.+. ...+.|++++.+ |+.+ ...+.|..+++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 222 356889999765 4443 345788888853
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.32 E-value=0.022 Score=56.43 Aligned_cols=106 Identities=14% Similarity=0.025 Sum_probs=63.2
Q ss_pred eeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC--CCeEEEEEcCCCeeeEe
Q 040274 70 TDLMRVNPFN-GVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK--ECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 70 v~~l~~sp~~-~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~--d~~i~vwd~~~~~~~~~ 146 (359)
...|++++.+ .++++-...+.|.++++........+.........++++|.+.+|+.+.. .+.|.++++.... ...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeE
Confidence 3566776543 34444445678888888754333222222345578899996555555443 2678888876322 222
Q ss_pred e----cCCceeEEEcCCC--c-EEEEcCCcEEEEcCC
Q 040274 147 L----TGHAKTLDFSQKG--L-LAVGTGSFAQILGDF 176 (359)
Q Consensus 147 ~----~~~v~~~~~s~~g--l-~~~~~d~~i~v~d~~ 176 (359)
+ -...+.|+|+|++ | ++-+..+.|.++++.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 2 2346789999876 3 344445789999864
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.29 E-value=0.031 Score=55.32 Aligned_cols=149 Identities=6% Similarity=-0.090 Sum_probs=85.8
Q ss_pred ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCC----CcceEEeecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCe
Q 040274 69 RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTT----SALLIKMLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYE 142 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~----~~~~~~~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~ 142 (359)
.+..|+|++.+..|+.+. .++.|+.+++.+ ......+.........|++++. ++++++-...+.|.++|+....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 577899999766666654 457899999875 2222222122233467888754 4455555567889999987543
Q ss_pred eeEeec---CCceeEEEcCCC--cEEEEcC--CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe-CC
Q 040274 143 VLQTLT---GHAKTLDFSQKG--LLAVGTG--SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH-SM 214 (359)
Q Consensus 143 ~~~~~~---~~v~~~~~s~~g--l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~-~d 214 (359)
....+. .....++++|.+ |+.+... +.|.++++... ....+.... ......|+|+|++..|+.+. ..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~--~~~~l~~~~---l~~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLVTEN---IQWPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC--CCCEESCSS---CSSCCCEEECTTTCCEEEEETTT
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC--CeeEEEeCC---CCCccEEEEeccCCEEEEEecCC
Confidence 322222 346889999865 4444332 67888775322 222221111 12467799999876655544 44
Q ss_pred CeEEEEEc
Q 040274 215 GWSGILVP 222 (359)
Q Consensus 215 g~~~i~~~ 222 (359)
+.|.++..
T Consensus 562 ~~I~~~d~ 569 (699)
T 1n7d_A 562 HSISSIDV 569 (699)
T ss_dssp TEEEEECS
T ss_pred CeEEEEcc
Confidence 55555443
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.17 E-value=0.41 Score=42.72 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=85.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecC----CC---EEEE-ecC--CCeEEEEEcC--CCeeeEe
Q 040274 79 NGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPN----GH---LMAT-TGK--ECKIKIWDLR--KYEVLQT 146 (359)
Q Consensus 79 ~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~----g~---~l~s-~~~--d~~i~vwd~~--~~~~~~~ 146 (359)
..+++.....+-+.+||+ +|+.+..+.. +.++.+.+-|+ |. ++++ .-. +++|.+|++. ++ .+..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceee
Confidence 456666667889999999 7888877743 66788887773 22 2233 333 5789999773 33 2444
Q ss_pred ec----------CCceeEEE--cCC-C---cEEEEcCCcEEEEcCCCCC------ccccccccccCCCCcceeEEEEccC
Q 040274 147 LT----------GHAKTLDF--SQK-G---LLAVGTGSFAQILGDFSGS------HNYSRYMGNSMVKGYQIGKVSFRPY 204 (359)
Q Consensus 147 ~~----------~~v~~~~~--s~~-g---l~~~~~d~~i~v~d~~~~~------~~~~~~~~~~~~~~~~v~~~~~sp~ 204 (359)
+. ..+..+|+ +|. + +++...++.+..|++.... +.+..+. .+..+..|...+.
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-----lgsq~EgcvvDd~ 190 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-----MNSQTEGMAADDE 190 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-----CSSCEEEEEEETT
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-----CCCCcceEEEcCC
Confidence 31 33566777 774 4 4455567889888864321 1122222 2236888999999
Q ss_pred CCEEEEEeCCCeEEEEE
Q 040274 205 EDVLGIGHSMGWSGILV 221 (359)
Q Consensus 205 ~~~l~~g~~dg~~~i~~ 221 (359)
...|+++-.+.-+..+.
T Consensus 191 ~g~Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFS 207 (355)
T ss_dssp TTEEEEEETTTEEEEEE
T ss_pred CCeEEEecccceEEEEe
Confidence 99999999886544443
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.13 E-value=0.67 Score=45.03 Aligned_cols=107 Identities=11% Similarity=-0.019 Sum_probs=67.8
Q ss_pred ceeEEEEcCCCCEEE-EEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC--CCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVVS-LGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK--ECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~-tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~--d~~i~vwd~~~~~~~~ 145 (359)
....|++++.+..|+ +-..++.|.+.++........+...-....+|+++|.+.+|+.+.. .+.|...++.. ....
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~ 163 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRF 163 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCE
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceE
Confidence 567899988555444 4456789999998754433333234445678999997555555443 46777777763 3222
Q ss_pred ee----cCCceeEEEcCCC---cEEEEcCCcEEEEcCC
Q 040274 146 TL----TGHAKTLDFSQKG---LLAVGTGSFAQILGDF 176 (359)
Q Consensus 146 ~~----~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~ 176 (359)
.+ -...+.+++++++ +++-+..+.|..+|+.
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 22 2346889999865 4444456789999853
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.07 E-value=1.2 Score=43.38 Aligned_cols=150 Identities=11% Similarity=-0.039 Sum_probs=86.6
Q ss_pred ceeEEEEcCCCCEEE-EEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec--CCCeEEEEEcCCCeeeE
Q 040274 69 RTDLMRVNPFNGVVS-LGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG--KECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~-tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~--~d~~i~vwd~~~~~~~~ 145 (359)
....|++++.+..|+ +-...+.|.+.++........+...-....+++++|...+|+.+. ..+.|...++.......
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT 160 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence 466788887555444 444567899999875433222323345568999999555555544 35678888876433222
Q ss_pred ee--cCCceeEEEcCCC---cEEEEcCCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeCCCeEEEE
Q 040274 146 TL--TGHAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGWSGIL 220 (359)
Q Consensus 146 ~~--~~~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~~~i~ 220 (359)
.+ -...+.+++++++ +++-...+.|..+|+..... ..+.... .....+++.. +.++.+-...+.+..+
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l----~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDL----PHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECC----SCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccC----CCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 22 2356899999975 44444567899998643322 2222221 1345677654 3333444446666665
Q ss_pred EcCCC
Q 040274 221 VPRSS 225 (359)
Q Consensus 221 ~~gs~ 225 (359)
...++
T Consensus 234 dk~tg 238 (628)
T 4a0p_A 234 NKTSG 238 (628)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 54333
No 310
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.03 E-value=0.77 Score=40.98 Aligned_cols=162 Identities=11% Similarity=0.123 Sum_probs=91.1
Q ss_pred CCCEEEEecc-ceeEEEEcCC----CC---EEEEEe-C--CCeEEEEeC--CCCcceEEeec------CC-CCeEEEEE-
Q 040274 59 SGRYMAVAGR-RTDLMRVNPF----NG---VVSLGH-S--GGTVTMWKP--TTSALLIKMLY------HQ-GPVSALAF- 117 (359)
Q Consensus 59 dg~~l~~~~~-~v~~l~~sp~----~~---~l~tg~-~--dg~v~lwd~--~~~~~~~~~~~------h~-~~v~~l~~- 117 (359)
+|+.|..-.. .++.+..-|+ |. ++++.. . +++|.+|++ .++. +..+.. .. ..+..+|+
T Consensus 58 ~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly 136 (355)
T 3amr_A 58 DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLY 136 (355)
T ss_dssp TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEE
T ss_pred CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEE
Confidence 5555544321 4556655552 22 223333 3 578999966 4443 444411 11 45677777
Q ss_pred -ecC-CC-EEEEecCCCeEEEEEcC-------CCeeeEee--cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCC----
Q 040274 118 -HPN-GH-LMATTGKECKIKIWDLR-------KYEVLQTL--TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGS---- 179 (359)
Q Consensus 118 -~p~-g~-~l~s~~~d~~i~vwd~~-------~~~~~~~~--~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~---- 179 (359)
+|. +. ++++...+|.+..|++. +.+.++++ .+.+..|...+.. ++.+-.+..|..|+.....
T Consensus 137 ~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~ 216 (355)
T 3amr_A 137 HSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNG 216 (355)
T ss_dssp ECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCC
T ss_pred ecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCc
Confidence 674 44 67888889999999883 34567777 4567788888754 6677777667777733221
Q ss_pred ccccccccccCCCCcceeEEEE--ccCCC-EEEEEe-CCCeEEEEEcC
Q 040274 180 HNYSRYMGNSMVKGYQIGKVSF--RPYED-VLGIGH-SMGWSGILVPR 223 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~v~~~~~--sp~~~-~l~~g~-~dg~~~i~~~g 223 (359)
..+..+... . ....+..|++ .++++ +|++++ .++...+|...
T Consensus 217 ~~v~~~~~g-~-l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 217 TVIDRADGR-H-LTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEBSSS-S-BCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEEecCC-c-cccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 122222111 0 1224777777 45555 666555 44555565543
No 311
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.61 E-value=1 Score=43.80 Aligned_cols=146 Identities=9% Similarity=-0.072 Sum_probs=88.1
Q ss_pred ceeEEEEcCCCCEEEEE-eCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCE-EEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLG-HSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHL-MATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg-~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~-l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+..|+|++.+..|+.+ ..++.|..+++........+.........+++++.+.. +++-...+.|.+.++........
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 56789999966665554 46789999998765433333333345678999876554 45555678899999875432111
Q ss_pred e---cCCceeEEEcCC-C-cEEEEc--CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeEE
Q 040274 147 L---TGHAKTLDFSQK-G-LLAVGT--GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWSG 218 (359)
Q Consensus 147 ~---~~~v~~~~~s~~-g-l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~~ 218 (359)
+ -.....|+++|. | ++.+.. .+.|...++... ....+... ......+++++++..|+.+.. .+.+.
T Consensus 118 ~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~--~~~~l~~~----~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 118 VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS--ERTTLVPN----VGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEEECS----CSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC--ceEEEECC----CCCcceEEEccccCEEEEEECCCCEEE
Confidence 1 234689999984 5 444443 467777775332 22222221 125788999987766665543 34444
Q ss_pred EE
Q 040274 219 IL 220 (359)
Q Consensus 219 i~ 220 (359)
.+
T Consensus 192 ~~ 193 (628)
T 4a0p_A 192 SS 193 (628)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 312
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.41 E-value=1.3 Score=39.11 Aligned_cols=120 Identities=12% Similarity=0.086 Sum_probs=83.1
Q ss_pred CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCCcEEEEc
Q 040274 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKGLLAVGT 166 (359)
Q Consensus 89 g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~gl~~~~~ 166 (359)
.+|.|.|+..+..+..-.. .--+.-.||..+.+|.-. ..++.++|+.+.+.+..+ ...|.--.|-.+..++--.
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT 124 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT 124 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE
T ss_pred CEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc
Confidence 3788888887654432211 112345689888777665 678999999999888777 5667777777666555556
Q ss_pred CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 167 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
+..|+-|++.....+...+..|....+..|.+...+++++|++..+
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEe
Confidence 7789999976544555555444333456899999999999987554
No 313
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.18 E-value=2.5 Score=40.99 Aligned_cols=147 Identities=9% Similarity=-0.038 Sum_probs=88.7
Q ss_pred ceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcceEEeecCCCCeEEEEEecC-CCEEEEecCCCeEEEEEcCCCeeeEe
Q 040274 69 RTDLMRVNPFNGVVSLGH-SGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPN-GHLMATTGKECKIKIWDLRKYEVLQT 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~-~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~-g~~l~s~~~d~~i~vwd~~~~~~~~~ 146 (359)
.+.+|+|++.+..|+.+. ..+.|..+++........+........++++++. ++++++-+..+.|.+.++.... ...
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~ 428 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKI 428 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEE
Confidence 457788988655555554 5778999988764433333333356778999874 5455565667889999987542 233
Q ss_pred e----cCCceeEEEcCC-C-cEEEEc--CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC-CCeE
Q 040274 147 L----TGHAKTLDFSQK-G-LLAVGT--GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS-MGWS 217 (359)
Q Consensus 147 ~----~~~v~~~~~s~~-g-l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~-dg~~ 217 (359)
+ -....+|++.|. | ++.+.. .+.|...++. + .....+... .-...+.+++++++..|+.+.. .+.+
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G-~~~~~l~~~---~l~~P~GlalD~~~~~LY~aD~~~~~I 503 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-G-SDRVVLVNT---SLGWPNGLALDYDEGKIYWGDAKTDKI 503 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-S-CSCEEEECS---SCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-C-CccEEEEeC---CCCCCeeeEEcccCCEEEEEECCCCEE
Confidence 3 134689999996 6 444443 2566666643 2 222222211 1125788999987777766644 3445
Q ss_pred EEEE
Q 040274 218 GILV 221 (359)
Q Consensus 218 ~i~~ 221 (359)
..+.
T Consensus 504 ~~~~ 507 (619)
T 3s94_A 504 EVMN 507 (619)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4444
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.17 E-value=1.7 Score=38.91 Aligned_cols=116 Identities=22% Similarity=0.219 Sum_probs=66.7
Q ss_pred eEEEECCCCCEEEEecc-------------------------ceeEEEEcCC---CCEEEEEeC----C----CeEEEEe
Q 040274 52 ILWILPSSGRYMAVAGR-------------------------RTDLMRVNPF---NGVVSLGHS----G----GTVTMWK 95 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------------------~v~~l~~sp~---~~~l~tg~~----d----g~v~lwd 95 (359)
+.|+|.|||+++++-.. ....|+++|+ +..|+++.. + ..|..|+
T Consensus 32 ~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 32 WSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred eEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 78888888876554321 3567899997 555555443 2 5677777
Q ss_pred CCCC-------cceEE-eec-CCCCeEEEEEecCCCEEEEecC-------------CCeEEEEEcCCC---------eee
Q 040274 96 PTTS-------ALLIK-MLY-HQGPVSALAFHPNGHLMATTGK-------------ECKIKIWDLRKY---------EVL 144 (359)
Q Consensus 96 ~~~~-------~~~~~-~~~-h~~~v~~l~~~p~g~~l~s~~~-------------d~~i~vwd~~~~---------~~~ 144 (359)
.... +.+.. +.. .......+.|.|||.++++.+. .|.|..+|.... ..+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i 191 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPI 191 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCE
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcE
Confidence 6643 11111 221 1112367999999988777543 245666665421 112
Q ss_pred Eee-cCCceeEEEcC-CC-cEEEEcC
Q 040274 145 QTL-TGHAKTLDFSQ-KG-LLAVGTG 167 (359)
Q Consensus 145 ~~~-~~~v~~~~~s~-~g-l~~~~~d 167 (359)
... -.....++|+| +| ++++...
T Consensus 192 ~a~G~rnp~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 192 WSYGHRNPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp EEECCSCCCEEEECTTTCCEEEEECC
T ss_pred EEEccCCcceEEEeCCCCCEEEEecC
Confidence 222 22357899999 67 6555543
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.13 E-value=2 Score=39.57 Aligned_cols=120 Identities=12% Similarity=0.086 Sum_probs=82.7
Q ss_pred CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCCcEEEEc
Q 040274 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKGLLAVGT 166 (359)
Q Consensus 89 g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~gl~~~~~ 166 (359)
..|.|.|+..+..+..-.. .--+.-.||..+.+|.-. ..++.+||+.+.+.+..+ ...|..-.|-.+..++--.
T Consensus 48 ~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT 123 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT 123 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC
T ss_pred CeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc
Confidence 3788888887654432211 112455688887776654 678999999998887777 5667777776666566666
Q ss_pred CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 167 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
+..|+-|++.....+...+..|..-.+..|.+...+++++|++..+
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 169 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEe
Confidence 7899999976544455555444333456899999999999987443
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.87 E-value=0.39 Score=42.10 Aligned_cols=127 Identities=6% Similarity=-0.085 Sum_probs=69.9
Q ss_pred EEEEcCCCCEEEEEeCC--------------CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEec----CCCeE
Q 040274 72 LMRVNPFNGVVSLGHSG--------------GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTG----KECKI 133 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~d--------------g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~----~d~~i 133 (359)
+--+++++.+|+.+..+ ..|+..++..+... .+. ... +..|++++..|+-+. ....|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLD--PDP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEE--CSC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eee--cCC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34468888888877643 36777777766432 222 122 236788888888765 34556
Q ss_pred EEEEcCCCeeeEeecCCceeEEEcCCC--cEEEEc-CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEE
Q 040274 134 KIWDLRKYEVLQTLTGHAKTLDFSQKG--LLAVGT-GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGI 210 (359)
Q Consensus 134 ~vwd~~~~~~~~~~~~~v~~~~~s~~g--l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 210 (359)
+..++............+ ..|+++| ++-.+. ...|.+.++... .. ..+... ... ..++|++.+|+-
T Consensus 132 y~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~-~~-~~l~~~------~~~-~~~~P~g~~iy~ 200 (302)
T 3s25_A 132 YRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQ-SE-ALFYDC------NCY-KPVVLDDTNVYY 200 (302)
T ss_dssp EEEETTSCCCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTT-EE-EEEECS------CEE-EEEEEETTEEEE
T ss_pred EEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCC-CE-EEEeCC------Ccc-ceeeecCCEEEE
Confidence 667776433322223333 3456666 443443 467888775333 22 222211 122 235688888876
Q ss_pred EeCC
Q 040274 211 GHSM 214 (359)
Q Consensus 211 g~~d 214 (359)
...+
T Consensus 201 t~~~ 204 (302)
T 3s25_A 201 MDVN 204 (302)
T ss_dssp EEGG
T ss_pred EEcC
Confidence 5543
No 317
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.58 E-value=0.73 Score=40.30 Aligned_cols=127 Identities=6% Similarity=-0.029 Sum_probs=73.1
Q ss_pred eEEEEcCCCCEEEEEe--C--CCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecC-CCeEEEEEcCCCeeeE
Q 040274 71 DLMRVNPFNGVVSLGH--S--GGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGK-ECKIKIWDLRKYEVLQ 145 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~--~--dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~-d~~i~vwd~~~~~~~~ 145 (359)
.+..|++++..|+..+ . +..|...+++... ...+..+.. ..|+|++..|+..+. ...|++.++..+....
T Consensus 107 ~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 107 PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 3457888888888776 2 3456666666433 344443332 456778888776654 6789999988765443
Q ss_pred eecCCceeEEEcCCC--cEEEEcC--CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEeC
Q 040274 146 TLTGHAKTLDFSQKG--LLAVGTG--SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 146 ~~~~~v~~~~~s~~g--l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
.+.+... ..++|++ ++-...+ ..|..-++... ....+... .+ ..|+|++++|..++.
T Consensus 182 l~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~--~~~~Lt~~------~~--~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 182 FYDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP--NPVVLTEA------NI--EHYNVYGSLIFYQRG 242 (302)
T ss_dssp EECSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC--CCEECSCS------CE--EEEEEETTEEEEEEC
T ss_pred EeCCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC--CeEEEeCC------Cc--ceEEECCCEEEEEEC
Confidence 3444433 3466877 4444433 35666664332 22222222 23 347888888876543
No 318
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.36 E-value=1.4 Score=46.08 Aligned_cols=88 Identities=10% Similarity=0.075 Sum_probs=55.6
Q ss_pred eEEEEeCCCCcceEEeec-CCCCeEEEEEec----CCCEEEEec----------CCCeEEEEEcCCCee--eEee--cCC
Q 040274 90 TVTMWKPTTSALLIKMLY-HQGPVSALAFHP----NGHLMATTG----------KECKIKIWDLRKYEV--LQTL--TGH 150 (359)
Q Consensus 90 ~v~lwd~~~~~~~~~~~~-h~~~v~~l~~~p----~g~~l~s~~----------~d~~i~vwd~~~~~~--~~~~--~~~ 150 (359)
.|++.|..+.+.+..+.- ....+.|++... ...+|+.|+ ..|.|++|++..++. ++.. ++.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 477888887776655542 233455554322 246777765 247899999875443 3322 678
Q ss_pred ceeEEEcCCCcEEEEcCCcEEEEcCCCC
Q 040274 151 AKTLDFSQKGLLAVGTGSFAQILGDFSG 178 (359)
Q Consensus 151 v~~~~~s~~gl~~~~~d~~i~v~d~~~~ 178 (359)
+++++-- +|.+.++.+..|++|++...
T Consensus 888 v~al~~~-~g~Lla~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 888 VYSMVEF-NGKLLASINSTVRLYEWTTE 914 (1158)
T ss_dssp EEEEEEE-TTEEEEEETTEEEEEEECTT
T ss_pred CEEEeee-CCEEEEEcCCEEEEEECCCC
Confidence 8887744 35556666789999997543
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.23 E-value=0.96 Score=40.44 Aligned_cols=116 Identities=11% Similarity=0.041 Sum_probs=65.7
Q ss_pred eEEEECCCCC-EEEEecc----------------------------ceeEEEEcCC---CCEEEEEeC--------CCeE
Q 040274 52 ILWILPSSGR-YMAVAGR----------------------------RTDLMRVNPF---NGVVSLGHS--------GGTV 91 (359)
Q Consensus 52 ~~l~~spdg~-~l~~~~~----------------------------~v~~l~~sp~---~~~l~tg~~--------dg~v 91 (359)
+.|+|.|||+ ++++-.. ....|+++|+ +..|+.+.. ...|
T Consensus 21 ~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v 100 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAV 100 (353)
T ss_dssp EEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEE
Confidence 8899999999 6655322 2367899996 555554432 2356
Q ss_pred EEEeCCCCc----ceEE-eec------CCCCeEEEEEecCCCEEEEecC-------------CCeEEEEEcCCC------
Q 040274 92 TMWKPTTSA----LLIK-MLY------HQGPVSALAFHPNGHLMATTGK-------------ECKIKIWDLRKY------ 141 (359)
Q Consensus 92 ~lwd~~~~~----~~~~-~~~------h~~~v~~l~~~p~g~~l~s~~~-------------d~~i~vwd~~~~------ 141 (359)
..|++.... .... +.. ....-..+.|.|||.++++.+. .|.|.-+|....
T Consensus 101 ~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~np 180 (353)
T 2g8s_A 101 GYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNP 180 (353)
T ss_dssp EEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCT
T ss_pred EEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCC
Confidence 666664321 1111 111 0112357999999977666543 246777776532
Q ss_pred --------eeeEee-cCCceeEEEcC-CC-cEEEEcC
Q 040274 142 --------EVLQTL-TGHAKTLDFSQ-KG-LLAVGTG 167 (359)
Q Consensus 142 --------~~~~~~-~~~v~~~~~s~-~g-l~~~~~d 167 (359)
..+..+ -.....++|+| +| ++++..+
T Consensus 181 f~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 181 FIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp TTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC
T ss_pred CcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC
Confidence 012222 12368899999 67 6555443
No 320
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.15 E-value=4.9 Score=39.74 Aligned_cols=139 Identities=13% Similarity=0.097 Sum_probs=77.7
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL-- 147 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~-- 147 (359)
|.++...+++..|..|.. +-|..+|+.++............|.++...++|.+.+.. . +-+.++|..+.....-.
T Consensus 193 i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~-~Gl~~~~~~~~~~~~~~~~ 269 (758)
T 3ott_A 193 VNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-D-NGLYVYHNDTTPLQHIIHD 269 (758)
T ss_dssp EEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-T-TEEEEECCTTSCCEEECCC
T ss_pred eEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-C-CceeEEecCCCcEEEEEcC
Confidence 566766666665545553 457888887764322111123458888888888776554 3 45888888765432211
Q ss_pred --------cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccc--c-ccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 148 --------TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYM--G-NSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 148 --------~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~--~-~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
...|.++....+| +..++..| +.++.. .. ....+. . ........|.++.-..+|.+.+ |+.+|
T Consensus 270 ~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~-~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G 344 (758)
T 3ott_A 270 SRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRY-NS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG 344 (758)
T ss_dssp TTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECC-CC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE
T ss_pred CCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-cccccc-CC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc
Confidence 1237788888888 77777665 555542 11 111111 0 0000233588888777776544 34455
Q ss_pred e
Q 040274 216 W 216 (359)
Q Consensus 216 ~ 216 (359)
.
T Consensus 345 l 345 (758)
T 3ott_A 345 L 345 (758)
T ss_dssp E
T ss_pred c
Confidence 3
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.13 E-value=1.3 Score=38.30 Aligned_cols=99 Identities=10% Similarity=0.141 Sum_probs=51.3
Q ss_pred CCCEEEEEeCCC-----eEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCC-------CeEEEEEcCCCee
Q 040274 78 FNGVVSLGHSGG-----TVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKE-------CKIKIWDLRKYEV 143 (359)
Q Consensus 78 ~~~~l~tg~~dg-----~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d-------~~i~vwd~~~~~~ 143 (359)
++.+++.|+.++ .+.+||+.+.+.... +...... .+++. -++.+++.|+.+ ..+.+||+.+..-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 455667776543 578889887643322 1111111 22222 256677777643 3588999987643
Q ss_pred e--EeecCC--ceeEEEcCCC-cEEEEcC-----CcEEEEcCCCC
Q 040274 144 L--QTLTGH--AKTLDFSQKG-LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 144 ~--~~~~~~--v~~~~~s~~g-l~~~~~d-----~~i~v~d~~~~ 178 (359)
. ..++.+ -.+++...+. ++.++.+ +.+.+||+.+.
T Consensus 186 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 2 222211 1222222222 5555543 46889996554
No 322
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.66 E-value=1.6 Score=38.90 Aligned_cols=106 Identities=14% Similarity=0.067 Sum_probs=61.2
Q ss_pred cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee--eEee-------cCCceeEEEcCC----C-c-EEEE--cCCc
Q 040274 107 YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV--LQTL-------TGHAKTLDFSQK----G-L-LAVG--TGSF 169 (359)
Q Consensus 107 ~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~--~~~~-------~~~v~~~~~s~~----g-l-~~~~--~d~~ 169 (359)
..-..-++++|.|+|.++++--..|.|++++...+.. +..+ .+....|+++|+ + + ++.+ .++.
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3345568999999999888776689999998765543 2222 234688999995 5 3 3323 3455
Q ss_pred EEEEcCCCCC----c--cccc-cccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 170 AQILGDFSGS----H--NYSR-YMGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 170 i~v~d~~~~~----~--~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
|.-|.+.... . .... +.............|.|.|||.++++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 6556533210 0 0111 1111000111356799999997666644
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.14 E-value=1.6 Score=40.47 Aligned_cols=105 Identities=12% Similarity=0.074 Sum_probs=58.3
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCee--eEeec---------CCceeEEEcC----CC--cEEEEc-----
Q 040274 109 QGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEV--LQTLT---------GHAKTLDFSQ----KG--LLAVGT----- 166 (359)
Q Consensus 109 ~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~--~~~~~---------~~v~~~~~s~----~g--l~~~~~----- 166 (359)
-...++++|.|+|+++++-...+.|++++..++.. +..+. +.+..|+|+| ++ +++.+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34567999999999887765555798888655543 33332 1245899999 45 333332
Q ss_pred -------CCcEEEEcCCCCC-c--cccccc-cccCCCCcceeEEEEccCCCEEEEEeC
Q 040274 167 -------GSFAQILGDFSGS-H--NYSRYM-GNSMVKGYQIGKVSFRPYEDVLGIGHS 213 (359)
Q Consensus 167 -------d~~i~v~d~~~~~-~--~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~g~~ 213 (359)
...|.-|++.... . ....+. ............|.|.|||.++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1345555532211 0 011111 000001124788999999987665443
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.72 E-value=2.4 Score=36.36 Aligned_cols=99 Identities=8% Similarity=0.068 Sum_probs=51.3
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCcceEEeecCCCCe-EEEEEecCCCEEEEecCC-----CeEEEEEcCCCeeeE-
Q 040274 78 FNGVVSLGHSG-----GTVTMWKPTTSALLIKMLYHQGPV-SALAFHPNGHLMATTGKE-----CKIKIWDLRKYEVLQ- 145 (359)
Q Consensus 78 ~~~~l~tg~~d-----g~v~lwd~~~~~~~~~~~~h~~~v-~~l~~~p~g~~l~s~~~d-----~~i~vwd~~~~~~~~- 145 (359)
++.+++.|+.+ ..+.+||+.+.+....-....... .+++. -++.+++.|+.+ ..+.+||+.+..-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 190 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV 190 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeC
Confidence 34455666543 368889988765332211111111 12222 267777777765 458899988764322
Q ss_pred -eecCC--ceeEEEcCCC--cEEEEcC-----CcEEEEcCCCC
Q 040274 146 -TLTGH--AKTLDFSQKG--LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 146 -~~~~~--v~~~~~s~~g--l~~~~~d-----~~i~v~d~~~~ 178 (359)
.++.+ -.++... ++ ++.++.+ +.+.+||+.+.
T Consensus 191 ~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 191 TPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp CCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 22211 1222222 34 5555543 46889997554
No 325
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.25 E-value=2.5 Score=41.56 Aligned_cols=71 Identities=15% Similarity=0.123 Sum_probs=43.0
Q ss_pred EEEEcCCCCEEEEEeCCC--eEEEEeCCCCcceEEe-----ecCCCCeEEEEEecC-CCEEEEecC--C-----CeEEEE
Q 040274 72 LMRVNPFNGVVSLGHSGG--TVTMWKPTTSALLIKM-----LYHQGPVSALAFHPN-GHLMATTGK--E-----CKIKIW 136 (359)
Q Consensus 72 ~l~~sp~~~~l~tg~~dg--~v~lwd~~~~~~~~~~-----~~h~~~v~~l~~~p~-g~~l~s~~~--d-----~~i~vw 136 (359)
+++...++.+++.|+.++ .+.+||+.+......- ........++.++.+ +.+++.||. + ..+.+|
T Consensus 494 ~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~y 573 (695)
T 2zwa_A 494 SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIF 573 (695)
T ss_dssp EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEE
T ss_pred eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEE
Confidence 333334777888887654 7899998876532211 111122233555655 667777775 2 458999
Q ss_pred EcCCCe
Q 040274 137 DLRKYE 142 (359)
Q Consensus 137 d~~~~~ 142 (359)
|+.+..
T Consensus 574 d~~~~~ 579 (695)
T 2zwa_A 574 KYDAEN 579 (695)
T ss_dssp EECTTC
T ss_pred EccCCc
Confidence 998766
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.22 Score=44.46 Aligned_cols=99 Identities=6% Similarity=0.028 Sum_probs=63.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCcceEEeecC-CCCeEEEEEe--c-CCCEEEEe-cCCCeEEEEEcCCCeeeEee--cCCc-
Q 040274 80 GVVSLGHSGGTVTMWKPTTSALLIKMLYH-QGPVSALAFH--P-NGHLMATT-GKECKIKIWDLRKYEVLQTL--TGHA- 151 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~~~~~~~~~~h-~~~v~~l~~~--p-~g~~l~s~-~~d~~i~vwd~~~~~~~~~~--~~~v- 151 (359)
.+++.++.||.|.-+|..+|+.+..+... ..++....-. + ++..++.. +.||.|+.+|..+|.....+ +.-+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999999888654 1222221110 1 22333333 68999999999888654444 1111
Q ss_pred -eeEEE------------cCCC-cEEEEcCCcEEEEcCCCC
Q 040274 152 -KTLDF------------SQKG-LLAVGTGSFAQILGDFSG 178 (359)
Q Consensus 152 -~~~~~------------s~~g-l~~~~~d~~i~v~d~~~~ 178 (359)
.-+.. +.+| +++++.++.+...|+.++
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTC
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC
Confidence 11221 1455 788888888888886655
No 327
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.99 E-value=8.7 Score=39.26 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=32.7
Q ss_pred CeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 111 ~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
.+.+++..++..++++-+.|+++++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677777888889999999999999999999988776
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.94 E-value=0.64 Score=44.07 Aligned_cols=67 Identities=9% Similarity=-0.019 Sum_probs=46.8
Q ss_pred CCeEEEEEecCCCEEEEec-CCCeEEEEEcCCCee-------------eEee--cCCceeEEEcCCC--cEEEEcCCcEE
Q 040274 110 GPVSALAFHPNGHLMATTG-KECKIKIWDLRKYEV-------------LQTL--TGHAKTLDFSQKG--LLAVGTGSFAQ 171 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s~~-~d~~i~vwd~~~~~~-------------~~~~--~~~v~~~~~s~~g--l~~~~~d~~i~ 171 (359)
...+.+.++|||++++.++ .+.++.++|+..... .... .-.....+|.++| +.+.--|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 3457789999999977765 589999999874211 1111 1224778999999 33333689999
Q ss_pred EEcCC
Q 040274 172 ILGDF 176 (359)
Q Consensus 172 v~d~~ 176 (359)
-|++.
T Consensus 403 kWni~ 407 (638)
T 3sbq_A 403 KWNME 407 (638)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99964
No 329
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.72 E-value=2.4 Score=36.39 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=52.4
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCc---ceEE--eecCCCCeEEEEEecCCCEEEEecCC-----CeEEEEEcCCCe
Q 040274 78 FNGVVSLGHSG-----GTVTMWKPTTSA---LLIK--MLYHQGPVSALAFHPNGHLMATTGKE-----CKIKIWDLRKYE 142 (359)
Q Consensus 78 ~~~~l~tg~~d-----g~v~lwd~~~~~---~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d-----~~i~vwd~~~~~ 142 (359)
++.+++.|+.+ ..+.+||+.+.. .... +........++. .++.+++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45566777654 368999988765 3222 111111112222 266777777654 368899988765
Q ss_pred e--eEeecCC--ceeEEEcCCC--cEEEEcC-----CcEEEEcCCCC
Q 040274 143 V--LQTLTGH--AKTLDFSQKG--LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 143 ~--~~~~~~~--v~~~~~s~~g--l~~~~~d-----~~i~v~d~~~~ 178 (359)
- +..++.+ -.+++.. ++ ++.++.+ ..+.+||+.+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 3 2222211 1222222 45 5555543 46888986554
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.56 E-value=11 Score=37.07 Aligned_cols=139 Identities=8% Similarity=-0.002 Sum_probs=74.9
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEe--
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQT-- 146 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~-- 146 (359)
.|.++....++ .|..|+.+| +..||..+.............|.++.. .+|. |..++.+ -|..||..++....-
T Consensus 64 ~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~ 138 (758)
T 3ott_A 64 RIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDT 138 (758)
T ss_dssp CEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECH
T ss_pred eEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEecc
Confidence 46677666655 555666554 789998876432211112235777654 4554 4444554 588899876554322
Q ss_pred ----e-cCCceeEEEcCCC-cEEEEcCCcEEEEcCCCCCccccccc--cccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 147 ----L-TGHAKTLDFSQKG-LLAVGTGSFAQILGDFSGSHNYSRYM--GNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 147 ----~-~~~v~~~~~s~~g-l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
+ ...|.++....+| +..++. +.|..|+.... . ...+. .........|.++...+++..|-+|+..|
T Consensus 139 ~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G 212 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNG-K-FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY 212 (758)
T ss_dssp HHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTT-E-EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE
T ss_pred CCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCC-c-eEEecCCCccccccceeEEEEEECCCCEEEEEECCC
Confidence 1 1346778888788 666654 45777874332 1 11111 11000122477887777766444444333
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.90 E-value=2.5 Score=36.38 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=52.3
Q ss_pred CCCEEEEEeCC----CeEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCC------CeEEEEEcCCCeeeE
Q 040274 78 FNGVVSLGHSG----GTVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKE------CKIKIWDLRKYEVLQ 145 (359)
Q Consensus 78 ~~~~l~tg~~d----g~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d------~~i~vwd~~~~~~~~ 145 (359)
++.+++.|+.+ ..+.+||+.+.+.... +........++. -++.+++.|+.+ ..+.+||+.+..-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 45566777654 5788999887653322 211111112222 266777777765 458999998765322
Q ss_pred --eecCC--ceeEEEcCCC--cEEEEc---------CCcEEEEcCCCC
Q 040274 146 --TLTGH--AKTLDFSQKG--LLAVGT---------GSFAQILGDFSG 178 (359)
Q Consensus 146 --~~~~~--v~~~~~s~~g--l~~~~~---------d~~i~v~d~~~~ 178 (359)
.++.+ -.+++.. ++ ++.++. -..+.+||+.+.
T Consensus 133 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp ECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 22211 1122222 44 444443 345888986554
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.52 E-value=5.7 Score=34.08 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=51.3
Q ss_pred CCCEEEEEeCC------CeEEEEeCCCCcceEEeecCCCC-eEEEEEecCCCEEEEecC---------CCeEEEEEcCCC
Q 040274 78 FNGVVSLGHSG------GTVTMWKPTTSALLIKMLYHQGP-VSALAFHPNGHLMATTGK---------ECKIKIWDLRKY 141 (359)
Q Consensus 78 ~~~~l~tg~~d------g~v~lwd~~~~~~~~~~~~h~~~-v~~l~~~p~g~~l~s~~~---------d~~i~vwd~~~~ 141 (359)
++.+++.|+.+ ..+.+||+.+......-...... -.+++. -++.+++.|+. -..+.+||+.+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 45566777654 45889998876533221111111 112222 36667777664 345889999876
Q ss_pred ee--eEeecCC--ceeEEEcCCC--cEEEEcC-----CcEEEEcCCCC
Q 040274 142 EV--LQTLTGH--AKTLDFSQKG--LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 142 ~~--~~~~~~~--v~~~~~s~~g--l~~~~~d-----~~i~v~d~~~~ 178 (359)
.- +..++.+ -.++... ++ ++.++.+ ..+.+||+.+.
T Consensus 180 ~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 180 TWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred eEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 43 2222211 1222333 44 4555432 46889996554
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.77 E-value=2.3 Score=36.73 Aligned_cols=98 Identities=14% Similarity=0.098 Sum_probs=50.8
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCC-----CeEEEEEcCCCeee-
Q 040274 78 FNGVVSLGHSG-----GTVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKE-----CKIKIWDLRKYEVL- 144 (359)
Q Consensus 78 ~~~~l~tg~~d-----g~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d-----~~i~vwd~~~~~~~- 144 (359)
++.+++.|+.+ ..+.+||+.+.+.... +........++.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 45556666533 3588888877643221 1111111122222 66777777764 45889998876432
Q ss_pred -EeecCC--ceeEEEcCCC--cEEEEcC-----CcEEEEcCCCC
Q 040274 145 -QTLTGH--AKTLDFSQKG--LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 145 -~~~~~~--v~~~~~s~~g--l~~~~~d-----~~i~v~d~~~~ 178 (359)
..++.+ -.+++.. ++ ++.++.+ ..+.+||+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 222111 1222223 44 5555543 56889996554
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.68 E-value=4.4 Score=35.04 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=50.8
Q ss_pred CCCEEEEEeCC--------CeEEEEeCCCCcceE--EeecCCCCeEEEEEecCCCEEEEecC-C-----CeEEEEEcCCC
Q 040274 78 FNGVVSLGHSG--------GTVTMWKPTTSALLI--KMLYHQGPVSALAFHPNGHLMATTGK-E-----CKIKIWDLRKY 141 (359)
Q Consensus 78 ~~~~l~tg~~d--------g~v~lwd~~~~~~~~--~~~~h~~~v~~l~~~p~g~~l~s~~~-d-----~~i~vwd~~~~ 141 (359)
++.+++.|+.+ ..+.+||+.+.+... .+...... .+++ .-++.+++.||. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEE-EECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 34455666532 358889988764322 11111111 1222 245667777776 2 46899999876
Q ss_pred ee--eEeecCC--ceeEEEcCCC--cEEEEcCC-----cEEEEcCCCC
Q 040274 142 EV--LQTLTGH--AKTLDFSQKG--LLAVGTGS-----FAQILGDFSG 178 (359)
Q Consensus 142 ~~--~~~~~~~--v~~~~~s~~g--l~~~~~d~-----~i~v~d~~~~ 178 (359)
+- +..++.+ -.+++.. ++ ++.++.++ .+.+||+.+.
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCC
Confidence 43 2222211 1222222 44 66666543 5888986554
No 335
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.20 E-value=6.2 Score=33.76 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=50.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCCC-----eEEEEEcCCCeeeE
Q 040274 78 FNGVVSLGHSG-----GTVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKEC-----KIKIWDLRKYEVLQ 145 (359)
Q Consensus 78 ~~~~l~tg~~d-----g~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d~-----~i~vwd~~~~~~~~ 145 (359)
++.+++.|+.+ ..+.+||+.+.+.... +...... .+++. -++.+++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 45566666644 3588899887643222 1111111 12222 2567777777553 57888988765322
Q ss_pred --eecCC--ceeEEEcCCC--cEEEEc-------CCcEEEEcCCCC
Q 040274 146 --TLTGH--AKTLDFSQKG--LLAVGT-------GSFAQILGDFSG 178 (359)
Q Consensus 146 --~~~~~--v~~~~~s~~g--l~~~~~-------d~~i~v~d~~~~ 178 (359)
.++.+ -.+++.. ++ ++.++. -..+.+||+.+.
T Consensus 139 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp ECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred cCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 22211 1222222 44 455543 245888986544
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.12 E-value=3.7 Score=43.56 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=79.4
Q ss_pred CeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee--cCCceeEEEcCCCcEEEEc
Q 040274 89 GTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL--TGHAKTLDFSQKGLLAVGT 166 (359)
Q Consensus 89 g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~v~~~~~s~~gl~~~~~ 166 (359)
.+|.|.|+..+..+..- .-.--+.-.||..+.+|.-. ..++.|||+.+.+.+.++ +.+|.--.|-....++--+
T Consensus 48 ~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT 123 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT 123 (1630)
T ss_pred ceEEEEECCCCCCcccc---cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc
Confidence 37888888765443211 11112344678777766654 678999999987776666 5667777776666555556
Q ss_pred CCcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 167 GSFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 167 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
+..|+-|++.....+...+..|..-.+..|.+-..+++++|++..+
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 7789999975544455555444332456788889999999987544
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.83 E-value=10 Score=37.17 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=56.7
Q ss_pred CCCCEEEEEeCC----CeEEEEeCCCCcceEEe-e------cCCCCeEEEEEec-CCCEEEEecCC------CeEEEEEc
Q 040274 77 PFNGVVSLGHSG----GTVTMWKPTTSALLIKM-L------YHQGPVSALAFHP-NGHLMATTGKE------CKIKIWDL 138 (359)
Q Consensus 77 p~~~~l~tg~~d----g~v~lwd~~~~~~~~~~-~------~h~~~v~~l~~~p-~g~~l~s~~~d------~~i~vwd~ 138 (359)
.++.+++.|+.+ ..+.+||+.++.....- . .....-.+++..+ ++.+++.||.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46889998876543222 1 1111123344444 77778887754 35889999
Q ss_pred CCCee--eEeecCC--ceeEEEcCCC--cEEEEcCC--cEEEEcCCCC
Q 040274 139 RKYEV--LQTLTGH--AKTLDFSQKG--LLAVGTGS--FAQILGDFSG 178 (359)
Q Consensus 139 ~~~~~--~~~~~~~--v~~~~~s~~g--l~~~~~d~--~i~v~d~~~~ 178 (359)
.+..- +..++.+ -.+++...++ ++.||.++ .+.+||+.+.
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 87543 2222211 1233332355 55666543 7899997654
No 338
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.41 E-value=10 Score=35.15 Aligned_cols=103 Identities=18% Similarity=0.274 Sum_probs=58.7
Q ss_pred EEEeccceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCC---cceEEee---c------CCCCeEEEEEecC----CCEEE
Q 040274 63 MAVAGRRTDLMRVNPFNG-VVSLGHSGGTVTMWKPTTS---ALLIKML---Y------HQGPVSALAFHPN----GHLMA 125 (359)
Q Consensus 63 l~~~~~~v~~l~~sp~~~-~l~tg~~dg~v~lwd~~~~---~~~~~~~---~------h~~~v~~l~~~p~----g~~l~ 125 (359)
+|.+-...+.|+|.|++. .|+++...|.|++++.... ..+..+. . ..+....|+|+|+ +.+.+
T Consensus 9 va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 9 VVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred eccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 444444678899999985 4455567899999975432 1222221 1 1356789999996 44433
Q ss_pred EecC--C----------CeEEEEEcCC----------CeeeEeec----CC-ceeEEEcCCC--cEEEE
Q 040274 126 TTGK--E----------CKIKIWDLRK----------YEVLQTLT----GH-AKTLDFSQKG--LLAVG 165 (359)
Q Consensus 126 s~~~--d----------~~i~vwd~~~----------~~~~~~~~----~~-v~~~~~s~~g--l~~~~ 165 (359)
+-+. + ..|.-|.+.. .+.+..+. .| ...|.|.||| +++.+
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 3221 1 1455565532 12333332 22 4789999999 44444
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.40 E-value=4.6 Score=34.95 Aligned_cols=100 Identities=10% Similarity=0.080 Sum_probs=49.9
Q ss_pred CCCEEEEEeCC-------CeEEEEeCCCCcceEEeecCCCCe-EEEEEecCCCEEEEecCC------CeEEEEEcCCCee
Q 040274 78 FNGVVSLGHSG-------GTVTMWKPTTSALLIKMLYHQGPV-SALAFHPNGHLMATTGKE------CKIKIWDLRKYEV 143 (359)
Q Consensus 78 ~~~~l~tg~~d-------g~v~lwd~~~~~~~~~~~~h~~~v-~~l~~~p~g~~l~s~~~d------~~i~vwd~~~~~~ 143 (359)
++.+++.|+.+ ..+.+||+.+.+....-....... .+++. .++.+++.|+.+ ..+.+||+.+.+-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 34566666643 257888888764332111111101 12222 466677777642 3589999987653
Q ss_pred e--EeecCC--ceeEEEcCCC-cEEEEcC-----CcEEEEcCCCC
Q 040274 144 L--QTLTGH--AKTLDFSQKG-LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 144 ~--~~~~~~--v~~~~~s~~g-l~~~~~d-----~~i~v~d~~~~ 178 (359)
. ..++.+ ..+++...+. ++.++.+ ..+.+||+.+.
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 2 222211 1222333222 5566543 35778886554
No 340
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=86.99 E-value=4.9 Score=35.51 Aligned_cols=71 Identities=11% Similarity=0.043 Sum_probs=51.9
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK 140 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~ 140 (359)
..+|..|+....++.-..-|.|++||+.|+.++..-.-...+|...+.+.+..-++.....|.|.--.++.
T Consensus 262 PVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 262 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred eEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 45677777777888888999999999999999887766667776666655545566666667666555544
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.95 E-value=7.1 Score=33.58 Aligned_cols=98 Identities=11% Similarity=0.100 Sum_probs=50.4
Q ss_pred CCCEEEEEeC----C-----CeEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCC-----CeEEEEEcCCC
Q 040274 78 FNGVVSLGHS----G-----GTVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKE-----CKIKIWDLRKY 141 (359)
Q Consensus 78 ~~~~l~tg~~----d-----g~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d-----~~i~vwd~~~~ 141 (359)
++.+++.|+. + ..+.+||+.+.+.... +........++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4556666654 2 3588899887643221 1111111122222 66777777643 35889998876
Q ss_pred eeeE--eecCC--ceeEEEcCCC--cEEEEcC-----CcEEEEcCCCC
Q 040274 142 EVLQ--TLTGH--AKTLDFSQKG--LLAVGTG-----SFAQILGDFSG 178 (359)
Q Consensus 142 ~~~~--~~~~~--v~~~~~s~~g--l~~~~~d-----~~i~v~d~~~~ 178 (359)
+-.. .++.+ -.+++.. ++ ++.++.+ +.+.+||+.+.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred eEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 4322 22211 1122222 44 5555543 46888986544
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=86.92 E-value=14 Score=31.75 Aligned_cols=100 Identities=12% Similarity=-0.015 Sum_probs=50.8
Q ss_pred CCCCEEEEEeC----C-------CeEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCC--------CeEEE
Q 040274 77 PFNGVVSLGHS----G-------GTVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKE--------CKIKI 135 (359)
Q Consensus 77 p~~~~l~tg~~----d-------g~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d--------~~i~v 135 (359)
.++.+++.|+. + ..+.+||+.+.+.... +...... .+++. -++.+++.||.+ ..+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL-FGLGE-ALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES-CEEEE-ETTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc-eeEEE-ECCEEEEEeCCcCCCCCcccceEEE
Confidence 46677777763 1 1277888887653221 1111111 12222 256677777742 45899
Q ss_pred EEcCCCee--eEeecCCc--eeEEEcCCC-cEEEEc-C-----CcEEEEcCCCC
Q 040274 136 WDLRKYEV--LQTLTGHA--KTLDFSQKG-LLAVGT-G-----SFAQILGDFSG 178 (359)
Q Consensus 136 wd~~~~~~--~~~~~~~v--~~~~~s~~g-l~~~~~-d-----~~i~v~d~~~~ 178 (359)
||+.+.+- +..++.+. .+++...+. ++.++. + +.+.+||+.+.
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred ECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 99987643 22222211 222332222 555555 2 47889986554
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=86.82 E-value=14 Score=31.58 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=53.1
Q ss_pred eEEEECCCCCEEEEecc-------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEe
Q 040274 52 ILWILPSSGRYMAVAGR-------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFH 118 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~ 118 (359)
+++.+. ||+....|.. .|..++...+..++ -. ||.|+.|=......+..-......|..++..
T Consensus 74 hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G 149 (282)
T 3qhy_B 74 HSLALK-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG 149 (282)
T ss_dssp EEEEEE-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC
T ss_pred EEEEEE-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc
Confidence 555554 6665555543 34444443332222 23 6777777544321111111112345555543
Q ss_pred cCCCEEEEecCCCeEEEEEcCCC-eeeE--eecCCceeEEEcCCCcEEEEcCCcEEEEcC
Q 040274 119 PNGHLMATTGKECKIKIWDLRKY-EVLQ--TLTGHAKTLDFSQKGLLAVGTGSFAQILGD 175 (359)
Q Consensus 119 p~g~~l~s~~~d~~i~vwd~~~~-~~~~--~~~~~v~~~~~s~~gl~~~~~d~~i~v~d~ 175 (359)
.+..++ -. ||.|+.|-.... +.-. .....|..++......++. .+|.|+.|-.
T Consensus 150 ~~~~~~--l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~ 205 (282)
T 3qhy_B 150 VYTALA--VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGD 205 (282)
T ss_dssp SSEEEE--EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE-ETTEEEEEEC
T ss_pred cCEEEE--EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEEE-ECCeEEEEEC
Confidence 332222 22 677777765432 1110 1123455565554443333 5788888863
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.42 E-value=7.2 Score=34.27 Aligned_cols=49 Identities=12% Similarity=0.077 Sum_probs=26.0
Q ss_pred CeEEEEeCCCCcceEEeecC-CCCe-EEEEEecCCCEEEEecC------CCeEEEEEc
Q 040274 89 GTVTMWKPTTSALLIKMLYH-QGPV-SALAFHPNGHLMATTGK------ECKIKIWDL 138 (359)
Q Consensus 89 g~v~lwd~~~~~~~~~~~~h-~~~v-~~l~~~p~g~~l~s~~~------d~~i~vwd~ 138 (359)
..+.+||+.+.+....-... .... .+++.. ++.+++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 47889998876433221111 1111 233332 5666777664 235777887
No 345
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=85.33 E-value=39 Score=35.34 Aligned_cols=93 Identities=17% Similarity=0.166 Sum_probs=55.8
Q ss_pred EEEEEeCCCeEEEEeCCCCcceEEe-ecCCCCeEEEEEecC------CCEEEEecC-CCeEEEEEcCCCeeeEee--cC-
Q 040274 81 VVSLGHSGGTVTMWKPTTSALLIKM-LYHQGPVSALAFHPN------GHLMATTGK-ECKIKIWDLRKYEVLQTL--TG- 149 (359)
Q Consensus 81 ~l~tg~~dg~v~lwd~~~~~~~~~~-~~h~~~v~~l~~~p~------g~~l~s~~~-d~~i~vwd~~~~~~~~~~--~~- 149 (359)
+++.++ ++.+.++.+..++..... ..-...|.|+++.|. +.+++.|.. |++|+|+++.+.+.+... .+
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~ 603 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE 603 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC
Confidence 444444 567777776654321111 123567999999763 368888886 999999999987765543 22
Q ss_pred -CceeEEEcC-CC---cEEEEcCCcEEEEc
Q 040274 150 -HAKTLDFSQ-KG---LLAVGTGSFAQILG 174 (359)
Q Consensus 150 -~v~~~~~s~-~g---l~~~~~d~~i~v~d 174 (359)
.+.++.+.. .+ ++.+-.||.+..+.
T Consensus 604 ~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 604 IIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 234443332 23 55555677665443
No 346
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=84.84 E-value=8.2 Score=35.57 Aligned_cols=68 Identities=12% Similarity=0.028 Sum_probs=46.5
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEE
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWD 137 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd 137 (359)
..+|..|+....++.-..-|.|++||+.|+.++..-.-...+|...+.+.+..-++.....|.|.--.
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~ 328 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC 328 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEE
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEE
Confidence 45777888777888889999999999999998877655555555555544444444444444444333
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=84.21 E-value=15 Score=32.21 Aligned_cols=53 Identities=21% Similarity=0.264 Sum_probs=26.9
Q ss_pred CCCEEEEEeC-C---------CeEEEEeCCCCcceEEeecC-CCCeEEEEEecCCCEEEEecCC
Q 040274 78 FNGVVSLGHS-G---------GTVTMWKPTTSALLIKMLYH-QGPVSALAFHPNGHLMATTGKE 130 (359)
Q Consensus 78 ~~~~l~tg~~-d---------g~v~lwd~~~~~~~~~~~~h-~~~v~~l~~~p~g~~l~s~~~d 130 (359)
++.+++.|+. + ..+.+||+.+.+....-... .......++..++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 3455566654 2 36889998876432211111 1111111222567778888754
No 348
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.52 E-value=16 Score=31.43 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=50.6
Q ss_pred cCCCCEEEEEeC----CC-------eEEEEeCCCCcceEE--eecCCCCeEEEEEecCCCEEEEecCC-------CeEEE
Q 040274 76 NPFNGVVSLGHS----GG-------TVTMWKPTTSALLIK--MLYHQGPVSALAFHPNGHLMATTGKE-------CKIKI 135 (359)
Q Consensus 76 sp~~~~l~tg~~----dg-------~v~lwd~~~~~~~~~--~~~h~~~v~~l~~~p~g~~l~s~~~d-------~~i~v 135 (359)
..++.+++.|+. ++ .+.+||+.+.+.... +...... .+++.. ++.+++.||.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEE
Confidence 345667777763 11 277888877643221 1111111 222222 56677777754 35888
Q ss_pred EEcCCCeeeE--eecCCc--eeEEEcCCC--cEEEEc------CCcEEEEcCCCC
Q 040274 136 WDLRKYEVLQ--TLTGHA--KTLDFSQKG--LLAVGT------GSFAQILGDFSG 178 (359)
Q Consensus 136 wd~~~~~~~~--~~~~~v--~~~~~s~~g--l~~~~~------d~~i~v~d~~~~ 178 (359)
||+.+.+-.. .++.+. .+++. .++ ++.++. -+.+.+||+.+.
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred EeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 9988765322 222211 12222 344 455543 246889997554
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.70 E-value=3.6 Score=39.08 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=54.5
Q ss_pred eEEEECCCCCEEEEecc------------------------------------ceeEEEEcCCCCEEEEEeCCCeEEEEe
Q 040274 52 ILWILPSSGRYMAVAGR------------------------------------RTDLMRVNPFNGVVSLGHSGGTVTMWK 95 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~------------------------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd 95 (359)
..+.++|||+|++.++. ...-.+|.++|....|-.-|..|..|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 88999999999999887 557788999885555555799999999
Q ss_pred CCCC----------cceEEeecCCCCeEEE-----EEecCCCEEEEecC
Q 040274 96 PTTS----------ALLIKMLYHQGPVSAL-----AFHPNGHLMATTGK 129 (359)
Q Consensus 96 ~~~~----------~~~~~~~~h~~~v~~l-----~~~p~g~~l~s~~~ 129 (359)
+... ..+..+.-|-.+-+-. +-.|+|++|++.+.
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 8642 2344444444332221 12568999998753
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.66 E-value=26 Score=29.86 Aligned_cols=117 Identities=16% Similarity=0.140 Sum_probs=66.0
Q ss_pred eEEEECCCCCEEEEecc-------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEe
Q 040274 52 ILWILPSSGRYMAVAGR-------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFH 118 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~ 118 (359)
+.+.+. ||+....|.. .|..++...+..++ . . ||.|+.|=.+..-.+..-..-...|..++..
T Consensus 35 h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~-l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G 110 (282)
T 3qhy_B 35 HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLA-L-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAG 110 (282)
T ss_dssp EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEE-E-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEE
T ss_pred eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEE-E-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECc
Confidence 677777 8887777654 56666665444333 3 4 8999999755322111100113467777766
Q ss_pred cCCCEEEEecCCCeEEEEEcCC-CeeeEe--ecCCceeEEEcCCCcEEEEcCCcEEEEcCC
Q 040274 119 PNGHLMATTGKECKIKIWDLRK-YEVLQT--LTGHAKTLDFSQKGLLAVGTGSFAQILGDF 176 (359)
Q Consensus 119 p~g~~l~s~~~d~~i~vwd~~~-~~~~~~--~~~~v~~~~~s~~gl~~~~~d~~i~v~d~~ 176 (359)
.+.. +.-. ||.|+.|-... +++-.. ....|..++......++.. ++.|+.|-..
T Consensus 111 ~~hs--~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 111 AWAS--YALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDN 167 (282)
T ss_dssp TTEE--EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECC
T ss_pred CCEE--EEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCC
Confidence 5433 3334 89999997654 222111 1234556655444433444 7888888643
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.48 E-value=26 Score=32.40 Aligned_cols=104 Identities=13% Similarity=-0.007 Sum_probs=56.2
Q ss_pred CCeEEEEEecCCC-EEEEecCCCeEEEEEcCCC---eeeEee------------cCCceeEEEcCC----C--cEEEEcC
Q 040274 110 GPVSALAFHPNGH-LMATTGKECKIKIWDLRKY---EVLQTL------------TGHAKTLDFSQK----G--LLAVGTG 167 (359)
Q Consensus 110 ~~v~~l~~~p~g~-~l~s~~~d~~i~vwd~~~~---~~~~~~------------~~~v~~~~~s~~----g--l~~~~~d 167 (359)
..-++|+|.|+|. .|+.+...|.|++++.... ..+..+ .+....|+|+|+ + +++.+..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999986 3444567899999975422 122222 123577999997 4 4444321
Q ss_pred ------------CcEEEEcCCCC--C-------ccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 168 ------------SFAQILGDFSG--S-------HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 168 ------------~~i~v~d~~~~--~-------~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
..|.-|.+... . ..+....... .......|.|.|||.+.++.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~--~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH--RKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS--SSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC--CcccCCcEeECCCCcEEEEeCCCC
Confidence 13444543321 0 1111111111 112467899999997666555443
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.20 E-value=7 Score=39.96 Aligned_cols=38 Identities=8% Similarity=-0.093 Sum_probs=33.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML 106 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~ 106 (359)
.+.+++..++..++++-+.|+.+++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888899999999999999999999887654
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.65 E-value=6.7 Score=40.99 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=31.7
Q ss_pred CeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 111 PVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 111 ~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
.+.+++..++..++++-+.|+++++||+.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666778889999999999999999999998876
No 354
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=73.51 E-value=8.2 Score=34.18 Aligned_cols=104 Identities=8% Similarity=0.016 Sum_probs=57.4
Q ss_pred CEEEEecCCCeEEEEEcCCCeeeEeecCCc--eeEEEc-----CCC-cEEE--EcCCcEEEEcCCCCCccccccccccCC
Q 040274 122 HLMATTGKECKIKIWDLRKYEVLQTLTGHA--KTLDFS-----QKG-LLAV--GTGSFAQILGDFSGSHNYSRYMGNSMV 191 (359)
Q Consensus 122 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~v--~~~~~s-----~~g-l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~~ 191 (359)
.+++.++.||.|+-+|..+|+.+.++...+ .-+... .++ ++.+ ..||.|..++..++ .....+......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG-LQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE-EEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC-cEEeeeccccce
Confidence 378889999999999999999988884321 111111 133 4444 46899998885443 221111111100
Q ss_pred CCcceeE---EEE-c----cCCCEEEEEeCCCeEEEEEcCCCC
Q 040274 192 KGYQIGK---VSF-R----PYEDVLGIGHSMGWSGILVPRSSE 226 (359)
Q Consensus 192 ~~~~v~~---~~~-s----p~~~~l~~g~~dg~~~i~~~gs~~ 226 (359)
..+++.. ... . ..+..+++|+.+|.+..+...+|.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 0011110 000 0 145678888888887777665554
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=72.36 E-value=52 Score=29.16 Aligned_cols=144 Identities=10% Similarity=-0.033 Sum_probs=69.9
Q ss_pred ceeEEEEcC-CCCEEEEEeCCC----eEEEEeCCCCc---ceEE---eec--------CCCCeEEEEEec-C-CCEEEEe
Q 040274 69 RTDLMRVNP-FNGVVSLGHSGG----TVTMWKPTTSA---LLIK---MLY--------HQGPVSALAFHP-N-GHLMATT 127 (359)
Q Consensus 69 ~v~~l~~sp-~~~~l~tg~~dg----~v~lwd~~~~~---~~~~---~~~--------h~~~v~~l~~~p-~-g~~l~s~ 127 (359)
.|.+|+++| +...|.++...| .|...+ +.+. .+.. +.. +...|.+++++| + ...|..+
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEE
Confidence 689999998 333444444444 444432 2221 1111 111 112477889987 2 4455555
Q ss_pred cCCCeEEEEEcC--CCeeeEee-------------------cCCceeEEEcCC--C-cEEEEcCCcEEEEcCCCCCcccc
Q 040274 128 GKECKIKIWDLR--KYEVLQTL-------------------TGHAKTLDFSQK--G-LLAVGTGSFAQILGDFSGSHNYS 183 (359)
Q Consensus 128 ~~d~~i~vwd~~--~~~~~~~~-------------------~~~v~~~~~s~~--g-l~~~~~d~~i~v~d~~~~~~~~~ 183 (359)
+..+.|...+-. +.+.+... ...+.+|.++|. + +++++.++.|...+. .+....
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D--gG~tW~ 212 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD--AGTDWK 212 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS--TTSSCE
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC--CCCCce
Confidence 555655554321 12222111 013568888873 3 666655555555542 222222
Q ss_pred ccccc-c---CC-----CCcceeEEEEccC-CCEEEEEeCCC
Q 040274 184 RYMGN-S---MV-----KGYQIGKVSFRPY-EDVLGIGHSMG 215 (359)
Q Consensus 184 ~~~~~-~---~~-----~~~~v~~~~~sp~-~~~l~~g~~dg 215 (359)
.+... . .+ .+..+.++.++|. ...|.+++..+
T Consensus 213 ~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 213 PLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp ECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 21110 0 00 0225889999986 46677776665
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.34 E-value=18 Score=34.54 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=36.6
Q ss_pred ceeEEEEcCCCCEEEEEeC------------CCeEEEEeCCCCcceEEeecC-CCCeEEEEEecCCCEEEEec
Q 040274 69 RTDLMRVNPFNGVVSLGHS------------GGTVTMWKPTTSALLIKMLYH-QGPVSALAFHPNGHLMATTG 128 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~------------dg~v~lwd~~~~~~~~~~~~h-~~~v~~l~~~p~g~~l~s~~ 128 (359)
....|.|+++|.+.++... +..|..+++.+++....+.+. ...++.++|+||++.|+.+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567888888876663321 125666677666644434332 34578888888887776653
No 357
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=71.78 E-value=95 Score=33.35 Aligned_cols=137 Identities=12% Similarity=0.157 Sum_probs=76.7
Q ss_pred CCeEEEEeCCC-CcceEEeecC----CCCeEEEEEecCCCEEEEec-------CCCeEEEEEcCCCeeeEeecCCceeE-
Q 040274 88 GGTVTMWKPTT-SALLIKMLYH----QGPVSALAFHPNGHLMATTG-------KECKIKIWDLRKYEVLQTLTGHAKTL- 154 (359)
Q Consensus 88 dg~v~lwd~~~-~~~~~~~~~h----~~~v~~l~~~p~g~~l~s~~-------~d~~i~vwd~~~~~~~~~~~~~v~~~- 154 (359)
+..|+-|++.. ..|...|.-| ...|.....+++.++++..| ..|.+.+|.+..+. .+.+.||+-++
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh
Confidence 35899999863 3455555544 34566777788888866544 24778888776432 23334443221
Q ss_pred EEcCC------CcEEEE----cCCcEEEEcCCCC--Ccc------ccccccccCCCCcceeEEEEccCCCEEEEEeCCCe
Q 040274 155 DFSQK------GLLAVG----TGSFAQILGDFSG--SHN------YSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMGW 216 (359)
Q Consensus 155 ~~s~~------gl~~~~----~d~~i~v~d~~~~--~~~------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg~ 216 (359)
.+-.+ .+++.+ .++.++|.++... +.. ...+..... ...-..++..++...++..-+.-|+
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~-~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA-QNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc-ccCcceEEEeccccCEEEEEecCce
Confidence 11111 133322 2378888886432 111 111111111 1223456778888888888899998
Q ss_pred EEEEEcCCCC
Q 040274 217 SGILVPRSSE 226 (359)
Q Consensus 217 ~~i~~~gs~~ 226 (359)
+.++...++.
T Consensus 282 ~~~~d~~t~~ 291 (1630)
T 1xi4_A 282 IHLYDLETGT 291 (1630)
T ss_pred EEEEecccch
Confidence 8887766553
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=71.60 E-value=15 Score=35.30 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=36.2
Q ss_pred eEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCcceEEeecC-CCCeEEEEEecCCCEEEEe
Q 040274 71 DLMRVNPFNGVVSLGHSG------------GTVTMWKPTTSALLIKMLYH-QGPVSALAFHPNGHLMATT 127 (359)
Q Consensus 71 ~~l~~sp~~~~l~tg~~d------------g~v~lwd~~~~~~~~~~~~h-~~~v~~l~~~p~g~~l~s~ 127 (359)
--|+|+|.|.++++-..+ ..+.+.++.+++...-+.++ ...++.++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 557889988866654322 23555566666654444443 3578888888888777664
No 359
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=70.02 E-value=60 Score=28.90 Aligned_cols=96 Identities=8% Similarity=0.023 Sum_probs=52.4
Q ss_pred CEEEEEeCCCeEEEEeCCCC--------cce---EEee-cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC-Ce----
Q 040274 80 GVVSLGHSGGTVTMWKPTTS--------ALL---IKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK-YE---- 142 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~~--------~~~---~~~~-~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~-~~---- 142 (359)
...+.-..||.|+.|=.+.. ... ..+. .....+..++++......+....||.|+.|-... ++
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 34445567888888853321 001 1111 1123345566666666777778899999996432 11
Q ss_pred -------e--eEeec-CCceeEEEcCCCcEEEEcCCcEEEEcC
Q 040274 143 -------V--LQTLT-GHAKTLDFSQKGLLAVGTGSFAQILGD 175 (359)
Q Consensus 143 -------~--~~~~~-~~v~~~~~s~~gl~~~~~d~~i~v~d~ 175 (359)
+ +..+. ..|..++......++...+|.|+.|-.
T Consensus 143 ~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 143 NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCC
Confidence 0 11111 135555554444667778889999863
No 360
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=62.54 E-value=40 Score=24.14 Aligned_cols=53 Identities=9% Similarity=0.124 Sum_probs=23.4
Q ss_pred CCEEEEecCCCeEEEEEcCCCeeeEee----cCCceeEEEcCCC-cEEEEcCCcEEEEc
Q 040274 121 GHLMATTGKECKIKIWDLRKYEVLQTL----TGHAKTLDFSQKG-LLAVGTGSFAQILG 174 (359)
Q Consensus 121 g~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~v~~~~~s~~g-l~~~~~d~~i~v~d 174 (359)
|.+.+.-..||.+.+|+...+..+..- .+....+.+..+| ++....++.+ +|.
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~ 81 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFV 81 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEE
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEE
Confidence 344444445555555554222222221 1122345666666 5544444443 565
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.52 E-value=12 Score=36.60 Aligned_cols=34 Identities=26% Similarity=0.684 Sum_probs=28.1
Q ss_pred eEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEee
Q 040274 112 VSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTL 147 (359)
Q Consensus 112 v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~ 147 (359)
|.++.+ +..++++-+.|+++++||+.+++++.+.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 444443 5779999999999999999999988776
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.37 E-value=29 Score=33.11 Aligned_cols=57 Identities=23% Similarity=0.360 Sum_probs=34.0
Q ss_pred ceeEEEcCCC-cEEEEcC-------------CcEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEE
Q 040274 151 AKTLDFSQKG-LLAVGTG-------------SFAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 151 v~~~~~s~~g-l~~~~~d-------------~~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
...|.|+++| |+.+... +.|..++...+ .....+... ....++.++|+||++.|+++
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG-el~~fl~~P---~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-EIRRFMVGP---IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC-CEEEEEECC---TTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC-eEEEEEeCC---CCccccCCEECCCCCEEEEE
Confidence 3578999999 4443321 14566663333 332222222 23468999999999988764
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.79 E-value=8.4 Score=40.25 Aligned_cols=38 Identities=8% Similarity=-0.093 Sum_probs=32.3
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEee
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKML 106 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~ 106 (359)
.+.+++..++..++++-+.|++++||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45666777888899999999999999999999887754
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=58.02 E-value=1e+02 Score=27.52 Aligned_cols=106 Identities=8% Similarity=-0.082 Sum_probs=61.6
Q ss_pred CCeEEEEEecCCCEEEE-ecC--------------CCeEEEEEcCCC--eeeEeec---------CCceeEEEc---CC-
Q 040274 110 GPVSALAFHPNGHLMAT-TGK--------------ECKIKIWDLRKY--EVLQTLT---------GHAKTLDFS---QK- 159 (359)
Q Consensus 110 ~~v~~l~~~p~g~~l~s-~~~--------------d~~i~vwd~~~~--~~~~~~~---------~~v~~~~~s---~~- 159 (359)
-.|..+...+++++-+. .|. -..|.+||+.+. +.++.+. ....++.+. |+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 35667777776665332 111 125889999999 8888772 124667766 32
Q ss_pred ----C--cEEEEcCCcEEEEcCCCCCccccccccccCC--------------CCcceeEEEEccC----CCEEEEEeCCC
Q 040274 160 ----G--LLAVGTGSFAQILGDFSGSHNYSRYMGNSMV--------------KGYQIGKVSFRPY----EDVLGIGHSMG 215 (359)
Q Consensus 160 ----g--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~sp~----~~~l~~g~~dg 215 (359)
+ +++=+.++.|.|||+.++ ........+..+ -...|..++.+|+ +++|....-.+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~-~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss 245 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQ-DSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA 245 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTT-EEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC
T ss_pred CCCccEEEEEcCCCCcEEEEECCCC-cEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC
Confidence 3 444445678999997654 222211100000 0125788888988 77777666555
Q ss_pred e
Q 040274 216 W 216 (359)
Q Consensus 216 ~ 216 (359)
.
T Consensus 246 ~ 246 (381)
T 3q6k_A 246 I 246 (381)
T ss_dssp S
T ss_pred C
Confidence 3
No 365
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=54.64 E-value=1.1e+02 Score=26.89 Aligned_cols=92 Identities=8% Similarity=-0.022 Sum_probs=47.1
Q ss_pred CEEEEEeCCCeEEEEeCCC-CcceEEe--ecCCCCeEEEEEec--CCCEEEEecCCC----eEEEEEcCCC---eeeEe-
Q 040274 80 GVVSLGHSGGTVTMWKPTT-SALLIKM--LYHQGPVSALAFHP--NGHLMATTGKEC----KIKIWDLRKY---EVLQT- 146 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~~-~~~~~~~--~~h~~~v~~l~~~p--~g~~l~s~~~d~----~i~vwd~~~~---~~~~~- 146 (359)
..|.+|...| +.+++... +..-..+ ......|.+|+++| .+.+++.+ ..+ .|...+ ..+ +.+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEES-STTSCCEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeC-CCCCCceECCcc
Confidence 4677777766 55555432 2111111 12245699999998 55555443 334 344432 222 22211
Q ss_pred --ec-----------CCceeEEEcC---CC-cEEEEcCCcEEEEc
Q 040274 147 --LT-----------GHAKTLDFSQ---KG-LLAVGTGSFAQILG 174 (359)
Q Consensus 147 --~~-----------~~v~~~~~s~---~g-l~~~~~d~~i~v~d 174 (359)
+. ..|.+++++| .+ +++++..+.|...+
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 11 1356788886 34 77777667666664
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.77 E-value=33 Score=32.81 Aligned_cols=56 Identities=23% Similarity=0.363 Sum_probs=33.8
Q ss_pred eeEEEcCCC-cEEEEcCC-------------cEEEEcCCCCCccccccccccCCCCcceeEEEEccCCCEEEEE
Q 040274 152 KTLDFSQKG-LLAVGTGS-------------FAQILGDFSGSHNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIG 211 (359)
Q Consensus 152 ~~~~~s~~g-l~~~~~d~-------------~i~v~d~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g 211 (359)
-.|+|+|.| |+.+...+ .+.+++...+ .....+..+ .++.++.++|+||++.|.+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g-~~~rf~~~P---~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-EIRRFMVGP---IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC-CEEEEEECC---TTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC-eEEEEEeCC---CCccCcCeeECCCCCEEEEE
Confidence 468899999 54444321 2444443222 333333333 45689999999999987653
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.28 E-value=25 Score=34.49 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=29.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeec
Q 040274 69 RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLY 107 (359)
Q Consensus 69 ~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~ 107 (359)
.|.|+.+ +..++++-+.|..+++|++.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 367999999999999999999988877654
No 368
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=46.39 E-value=74 Score=22.34 Aligned_cols=16 Identities=6% Similarity=0.096 Sum_probs=10.3
Q ss_pred eEEEECCCCCEEEEec
Q 040274 52 ILWILPSSGRYMAVAG 67 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~ 67 (359)
|.+.+..||++++...
T Consensus 21 y~l~~q~DgNLvly~~ 36 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH 36 (105)
T ss_dssp EEEEECTTSCEEEEET
T ss_pred EEEEECCCCeEEEEEC
Confidence 6666667777666543
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=45.15 E-value=2.3e+02 Score=27.69 Aligned_cols=127 Identities=12% Similarity=0.008 Sum_probs=63.9
Q ss_pred CeEEEEeCCCCc--ceEEeecCCCCe-EEEEEecCCC-----EEEEecCC---CeEEEEEcCC--CeeeEee--cCCcee
Q 040274 89 GTVTMWKPTTSA--LLIKMLYHQGPV-SALAFHPNGH-----LMATTGKE---CKIKIWDLRK--YEVLQTL--TGHAKT 153 (359)
Q Consensus 89 g~v~lwd~~~~~--~~~~~~~h~~~v-~~l~~~p~g~-----~l~s~~~d---~~i~vwd~~~--~~~~~~~--~~~v~~ 153 (359)
..|+.|.+-|.. -...+.+....+ .++..++++. .+++.+.+ ..+++.|... ++ +..+ +.. ..
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~ 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSD-AT 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTT-CE
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCc-ce
Confidence 468888877652 233444433333 3445566666 35554422 3466667653 33 2223 222 22
Q ss_pred EEEcCCC-cEEEE-----------cCCcEEEEcCCCCC------ccccccccccCCCCcceeEEEEccCCCEEEEEeCCC
Q 040274 154 LDFSQKG-LLAVG-----------TGSFAQILGDFSGS------HNYSRYMGNSMVKGYQIGKVSFRPYEDVLGIGHSMG 215 (359)
Q Consensus 154 ~~~s~~g-l~~~~-----------~d~~i~v~d~~~~~------~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~g~~dg 215 (359)
+..+.++ ++... ..+.|.++|+.... .....+..+. ....+..+.|..+ .++++...++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~-~l~~~~~~~~ 370 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT--ANEVFNFISTTKD-RVFLATYDNV 370 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC--TTEEEEEEEECSS-CEEEEEEETT
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC--CCCeEEEEEEECC-EEEEEEEECC
Confidence 3344555 33311 34678888864421 1222222232 2335778888865 5666777777
Q ss_pred eEEEE
Q 040274 216 WSGIL 220 (359)
Q Consensus 216 ~~~i~ 220 (359)
...++
T Consensus 371 ~~~l~ 375 (711)
T 4hvt_A 371 VAKVV 375 (711)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65554
No 370
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=44.83 E-value=1.6e+02 Score=25.93 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=67.3
Q ss_pred eEEEECCCCCEEEEecc-----------------------ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC-c-------
Q 040274 52 ILWILPSSGRYMAVAGR-----------------------RTDLMRVNPFNGVVSLGHSGGTVTMWKPTTS-A------- 100 (359)
Q Consensus 52 ~~l~~spdg~~l~~~~~-----------------------~v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~-~------- 100 (359)
++++++.+|+....|.. .+..+.++......+.-..||.|+.|=.... +
T Consensus 118 h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~ 197 (389)
T 3kci_A 118 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE 197 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCC
T ss_pred eEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCc
Confidence 77888888888777654 0112222222334444557899999954321 1
Q ss_pred c---eEEee-cCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCC-Ce---------eeE-ee---c-CCceeEEEcCCCc
Q 040274 101 L---LIKML-YHQGPVSALAFHPNGHLMATTGKECKIKIWDLRK-YE---------VLQ-TL---T-GHAKTLDFSQKGL 161 (359)
Q Consensus 101 ~---~~~~~-~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~-~~---------~~~-~~---~-~~v~~~~~s~~gl 161 (359)
. ...+. .....|..++......+.+....||.|+.|-... ++ ... .+ . ..|..++......
T Consensus 198 ~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs 277 (389)
T 3kci_A 198 DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 277 (389)
T ss_dssp CEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEE
T ss_pred ccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEE
Confidence 0 01111 1223566666544335666667899999996532 11 111 11 1 1345555544445
Q ss_pred EEEEcCCcEEEEcC
Q 040274 162 LAVGTGSFAQILGD 175 (359)
Q Consensus 162 ~~~~~d~~i~v~d~ 175 (359)
++...+|.|+.|-.
T Consensus 278 ~alt~~G~v~~wG~ 291 (389)
T 3kci_A 278 VALTKSGAVYTWGK 291 (389)
T ss_dssp EEEETTSCEEEEEC
T ss_pred EEEeCCCeEEEEeC
Confidence 66678899999963
No 371
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=44.37 E-value=81 Score=22.22 Aligned_cols=14 Identities=7% Similarity=-0.092 Sum_probs=8.0
Q ss_pred eEEEEccCCCEEEE
Q 040274 197 GKVSFRPYEDVLGI 210 (359)
Q Consensus 197 ~~~~~sp~~~~l~~ 210 (359)
..+.+.++|.+++-
T Consensus 84 ~~~~L~ddGNlvly 97 (109)
T 3dzw_A 84 YVCVLQKDRNVVIY 97 (109)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEEEeCCCEEEEE
Confidence 34556666665544
No 372
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=42.04 E-value=89 Score=22.05 Aligned_cols=14 Identities=7% Similarity=-0.076 Sum_probs=9.1
Q ss_pred eeEEEEccCCCEEE
Q 040274 196 IGKVSFRPYEDVLG 209 (359)
Q Consensus 196 v~~~~~sp~~~~l~ 209 (359)
...+.+.++|.+++
T Consensus 84 ~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 84 HYVLVLQQDRNVVI 97 (110)
T ss_dssp CCEEEECTTSCEEE
T ss_pred CEEEEEeCCccEEE
Confidence 34567778887554
No 373
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=38.40 E-value=2.2e+02 Score=25.44 Aligned_cols=15 Identities=13% Similarity=-0.137 Sum_probs=12.1
Q ss_pred eEEEECCC----CCEEEEe
Q 040274 52 ILWILPSS----GRYMAVA 66 (359)
Q Consensus 52 ~~l~~spd----g~~l~~~ 66 (359)
+.|++||+ ++.|..+
T Consensus 223 ~gIaLsp~~~~~~~~LYf~ 241 (381)
T 3q6k_A 223 FGITLGDRDSEGNRPAYYL 241 (381)
T ss_dssp EEEEECCCCTTSCCEEEEE
T ss_pred eEEEecCCcCCCCeEEEEE
Confidence 89999998 7777654
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=37.48 E-value=2e+02 Score=24.88 Aligned_cols=144 Identities=10% Similarity=0.042 Sum_probs=76.8
Q ss_pred CCCCEEEEEeCCCeEEEE---eCCC------CcceEEee--cCCCCeEEE-EEec--CCCEEEEecCCCeEEEEEcCCCe
Q 040274 77 PFNGVVSLGHSGGTVTMW---KPTT------SALLIKML--YHQGPVSAL-AFHP--NGHLMATTGKECKIKIWDLRKYE 142 (359)
Q Consensus 77 p~~~~l~tg~~dg~v~lw---d~~~------~~~~~~~~--~h~~~v~~l-~~~p--~g~~l~s~~~d~~i~vwd~~~~~ 142 (359)
.....|+.-++.|.++.. ++.. |.++..+. .....|.++ .+.. +..++++++.+|.|+...+....
T Consensus 51 ~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~ 130 (327)
T 3uc1_A 51 STHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFD 130 (327)
T ss_dssp ETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGC
T ss_pred CCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhh
Confidence 344455555666765543 3332 23322221 123445554 4432 57799999999999998875432
Q ss_pred e-------eEee--cCCceeEEE-cCCC-cEEEEcCCcEEEEcCC--CCCccccc---cccccCCCCcceeEEEEccCCC
Q 040274 143 V-------LQTL--TGHAKTLDF-SQKG-LLAVGTGSFAQILGDF--SGSHNYSR---YMGNSMVKGYQIGKVSFRPYED 206 (359)
Q Consensus 143 ~-------~~~~--~~~v~~~~~-s~~g-l~~~~~d~~i~v~d~~--~~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~ 206 (359)
. ...+ .+.+..+.. +.+. ++..+..|.+..+... .-...-.. ........+..|.++...+.+.
T Consensus 131 ~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~ 210 (327)
T 3uc1_A 131 SNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGT 210 (327)
T ss_dssp CCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTC
T ss_pred ccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCC
Confidence 2 1122 233433333 3333 7888888888777644 21110000 0001111334577776666677
Q ss_pred EEEEEeCCCeEEEE
Q 040274 207 VLGIGHSMGWSGIL 220 (359)
Q Consensus 207 ~l~~g~~dg~~~i~ 220 (359)
+|++.+..|++...
T Consensus 211 ~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 211 YLLVATSGGYAKRT 224 (327)
T ss_dssp EEEEEETTSEEEEE
T ss_pred EEEEEeCCCcEEEE
Confidence 88888888876554
No 375
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=31.53 E-value=1.4e+02 Score=21.34 Aligned_cols=15 Identities=13% Similarity=0.087 Sum_probs=9.6
Q ss_pred eeEEEEccCCCEEEE
Q 040274 196 IGKVSFRPYEDVLGI 210 (359)
Q Consensus 196 v~~~~~sp~~~~l~~ 210 (359)
...+.+.++|.+++.
T Consensus 94 ~~~l~l~~~Gnlvl~ 108 (119)
T 1b2p_A 94 HYVLVLQPDRNVVIY 108 (119)
T ss_dssp CEEEEECTTSCEEEE
T ss_pred CEEEEEECCCcEEEE
Confidence 455777788875443
No 376
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=31.11 E-value=1.4e+02 Score=21.00 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=45.6
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcCCCeeeEeecC
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMWKPTTSALLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLRKYEVLQTLTG 149 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 149 (359)
...+.+..+|++++.- .+ ..+|...+..+ +.-..+.+..+|++++... ++. .+|.-.+.. ..
T Consensus 21 ~~~l~~~~dGnlvl~~--~~-~~vW~sn~~~~--------~~~~~l~l~~dGNLVl~~~-~~~-~~W~S~t~~-----~~ 82 (110)
T 3a0c_A 21 SYRLIMQGDCNFVLYD--SG-KPVWASNTGGL--------GSGCRLTLHNNGNLVIYDQ-SNR-VIWQTKTNG-----KE 82 (110)
T ss_dssp TEEEEECTTSCEEEEE--TT-EEEEECCCTTS--------CSSCEEEECTTSCEEEECT-TCC-EEEECCCCC-----SS
T ss_pred CEEEEEcCCCcEEEEE--CC-EEEEECCCCCC--------CCcEEEEEeCCCCEEEECC-CCc-EEEecCCCC-----CC
Confidence 3455666677665553 23 35676554321 1123567788898877654 343 578754321 12
Q ss_pred CceeEEEcCCC-cEEEEcCCcEEEEc
Q 040274 150 HAKTLDFSQKG-LLAVGTGSFAQILG 174 (359)
Q Consensus 150 ~v~~~~~s~~g-l~~~~~d~~i~v~d 174 (359)
....+.+.++| ++.-. + .+|.
T Consensus 83 g~~~l~l~~dGnlvl~~--~--~~W~ 104 (110)
T 3a0c_A 83 DHYVLVLQQDRNVVIYG--P--VVWA 104 (110)
T ss_dssp SCCEEEECTTSCEEEEC--S--EEEE
T ss_pred CCEEEEEeCCccEEEEC--C--CEec
Confidence 24467778888 44432 3 4776
No 377
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=30.47 E-value=2.4e+02 Score=23.63 Aligned_cols=150 Identities=12% Similarity=0.033 Sum_probs=77.0
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEE---eCCCCcceEEeecCCCCeEEEEEec-CCCEEEEecCCCeEEEEEcCCCe---
Q 040274 70 TDLMRVNPFNGVVSLGHSGGTVTMW---KPTTSALLIKMLYHQGPVSALAFHP-NGHLMATTGKECKIKIWDLRKYE--- 142 (359)
Q Consensus 70 v~~l~~sp~~~~l~tg~~dg~v~lw---d~~~~~~~~~~~~h~~~v~~l~~~p-~g~~l~s~~~d~~i~vwd~~~~~--- 142 (359)
+..+........|+.-+++|.++.- ++........+ .....|.++-... +..+++.++.+|.++...+....
T Consensus 26 ~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~ 104 (276)
T 3no0_A 26 VVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKA 104 (276)
T ss_dssp EEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCS
T ss_pred EEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhc
Confidence 3333333344456666677776543 33222111113 2345566654421 46789999999999998875432
Q ss_pred ---eeEee--cCCceeEEEcCCC--cEEEEcCCcEEEEcCCCCCccccc---cccccCCCCcceeEEEEccCCCEEEEEe
Q 040274 143 ---VLQTL--TGHAKTLDFSQKG--LLAVGTGSFAQILGDFSGSHNYSR---YMGNSMVKGYQIGKVSFRPYEDVLGIGH 212 (359)
Q Consensus 143 ---~~~~~--~~~v~~~~~s~~g--l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~g~ 212 (359)
....+ .+.+..+....+. ++..+..|.+..++...-+..-.. ........+..|.++...+++..|++.+
T Consensus 105 ~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T 184 (276)
T 3no0_A 105 QGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVIT 184 (276)
T ss_dssp TTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEE
T ss_pred CCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEe
Confidence 11122 2334444333333 788888888877763221110000 0000111223566665555666788888
Q ss_pred CCCeEEEE
Q 040274 213 SMGWSGIL 220 (359)
Q Consensus 213 ~dg~~~i~ 220 (359)
..|+....
T Consensus 185 ~~G~~kr~ 192 (276)
T 3no0_A 185 AKGRVKKI 192 (276)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEe
Confidence 88766544
No 378
>3ije_A Integrin alpha-V; integrin structure, activation, EGF domains, FLIM, cell SIGN cell adhesion, cleavage on PAIR of basic residues; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 4g1e_A* 4g1m_A* 1jv2_A* 1l5g_A* 1m1x_A* 1u8c_A*
Probab=25.70 E-value=5.4e+02 Score=26.15 Aligned_cols=65 Identities=14% Similarity=0.024 Sum_probs=33.6
Q ss_pred EcCCCC-EEEEE-----eCCCeEEEEeCCCCcceEEeecCC------CCeEEEEEecCCCE-EEEe-------------c
Q 040274 75 VNPFNG-VVSLG-----HSGGTVTMWKPTTSALLIKMLYHQ------GPVSALAFHPNGHL-MATT-------------G 128 (359)
Q Consensus 75 ~sp~~~-~l~tg-----~~dg~v~lwd~~~~~~~~~~~~h~------~~v~~l~~~p~g~~-l~s~-------------~ 128 (359)
|+-||. -|++| ...|.|.+|+-........+.+.. ..+....++-||.. |+.+ .
T Consensus 231 ~ngDG~~DlvvGaP~~~~~~G~V~i~~~~~~~~~~~~~g~~~gs~fG~sva~~D~ngDG~~DLvVgaP~~~~~~~~g~~~ 310 (967)
T 3ije_A 231 FNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQ 310 (967)
T ss_dssp CSSSSSCEEEEEETTHHHHTCEEEEECSSSSCEEEEEECSSTTSCTTSEEEEECTTSSSCCEEEEEETTCEEECTTSCEE
T ss_pred ECCCCCeEEEEEecccCCCCcEEEEEeCCCceeeeEecccccCCceeEEEEEEecCCCCCceEEEEcccccccccccccc
Confidence 444543 45555 235788888643333333443321 13344445556652 4444 2
Q ss_pred CCCeEEEEEcC
Q 040274 129 KECKIKIWDLR 139 (359)
Q Consensus 129 ~d~~i~vwd~~ 139 (359)
..|.+++|.-.
T Consensus 311 ~~G~v~vy~~~ 321 (967)
T 3ije_A 311 EVGQVSVSLQR 321 (967)
T ss_dssp ECCEEEEEECC
T ss_pred cCCcEEEEEEC
Confidence 35889998654
No 379
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=24.36 E-value=3.4e+02 Score=23.39 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=58.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc-------ceEEeecCCCCeEEEEEecCCCEEEEecCCCeEEEEEcC--C--------
Q 040274 78 FNGVVSLGHSGGTVTMWKPTTSA-------LLIKMLYHQGPVSALAFHPNGHLMATTGKECKIKIWDLR--K-------- 140 (359)
Q Consensus 78 ~~~~l~tg~~dg~v~lwd~~~~~-------~~~~~~~h~~~v~~l~~~p~g~~l~s~~~d~~i~vwd~~--~-------- 140 (359)
+..++++.+.+|.|..-.+.... ....+.. .+.+..+........++..+..|.+..+... .
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 56799999999999988764321 1122333 3455555555555678888888988877665 2
Q ss_pred -CeeeEee--cCCceeEEEcC-CC-cEEEEcCCcEEEEcC
Q 040274 141 -YEVLQTL--TGHAKTLDFSQ-KG-LLAVGTGSFAQILGD 175 (359)
Q Consensus 141 -~~~~~~~--~~~v~~~~~s~-~g-l~~~~~d~~i~v~d~ 175 (359)
|.....+ ...|.++...+ +. ++.++..|.+....+
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred CCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 1111222 23355544443 33 778888887776653
No 380
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=24.02 E-value=5.2e+02 Score=25.37 Aligned_cols=142 Identities=9% Similarity=0.072 Sum_probs=68.3
Q ss_pred ceeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCcceEEeec-------CCCCeEEEEEecC-CCEEEEecCCCe----EEE
Q 040274 69 RTDLMRVNPF-NGVVSLGHSGGTVTMWKPTTSALLIKMLY-------HQGPVSALAFHPN-GHLMATTGKECK----IKI 135 (359)
Q Consensus 69 ~v~~l~~sp~-~~~l~tg~~dg~v~lwd~~~~~~~~~~~~-------h~~~v~~l~~~p~-g~~l~s~~~d~~----i~v 135 (359)
.|.+|+++|. ...++++...|.|...+ +.+..=..+.. ....|.+++++|. ...++.+..+.. -.|
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEE
Confidence 6899999995 45667777777765554 22221111111 1346999999984 233333322211 223
Q ss_pred EE-cCCCeeeEee----------cC--CceeEEEcCCC---cEEEEcCCcEEEEcCCCCCcccccccccc---CCCCcce
Q 040274 136 WD-LRKYEVLQTL----------TG--HAKTLDFSQKG---LLAVGTGSFAQILGDFSGSHNYSRYMGNS---MVKGYQI 196 (359)
Q Consensus 136 wd-~~~~~~~~~~----------~~--~v~~~~~s~~g---l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~~~~~~v 196 (359)
|- .+.|+.-..+ .+ .+..++++|.. ++++...+.|.. ....+.....+.... . ....+
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~--S~DgG~TW~~~~~~~~~~~-~~~~~ 171 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK--SSDRAKTWTNVTSIPDAFT-NGIGY 171 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE--ESSTTSSCEEETTSCCCCS-TTTCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE--ECCCCcccCCCccCccccC-CCCCe
Confidence 32 2223221111 11 24568888754 444443443332 223333322222110 0 11257
Q ss_pred eEEEEccC-CCEEEEEeCC
Q 040274 197 GKVSFRPY-EDVLGIGHSM 214 (359)
Q Consensus 197 ~~~~~sp~-~~~l~~g~~d 214 (359)
..+.++|. +..|+++..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 88999884 4566666553
No 381
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=23.36 E-value=5.2e+02 Score=25.09 Aligned_cols=50 Identities=20% Similarity=0.251 Sum_probs=30.2
Q ss_pred ceeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCcceEEeecC-------CCCeEEEEEec
Q 040274 69 RTDLMRVNPFN-GVVSLGHSGGTVTMWKPTTSALLIKMLYH-------QGPVSALAFHP 119 (359)
Q Consensus 69 ~v~~l~~sp~~-~~l~tg~~dg~v~lwd~~~~~~~~~~~~h-------~~~v~~l~~~p 119 (359)
.|..|+++|.+ ..++++...|.|..++-....-.. +..+ ...|.+|+++|
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~-i~~~~~~~~~~~~~i~~i~~dp 81 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIP-LLDHFQMDEYSYYGVESIATDP 81 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEE-CCTTCCGGGGGGGCEEEEEECS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEE-CcCccCcccccCCCcceEEeCC
Confidence 58999999953 566667666766665422111111 1111 24589999998
No 382
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.11 E-value=2e+02 Score=20.24 Aligned_cols=26 Identities=12% Similarity=0.148 Sum_probs=14.9
Q ss_pred EEEEEecCCCEEEEecCCCeEEEEEcCC
Q 040274 113 SALAFHPNGHLMATTGKECKIKIWDLRK 140 (359)
Q Consensus 113 ~~l~~~p~g~~l~s~~~d~~i~vwd~~~ 140 (359)
..+.+..+|++++... ++.+ +|.-.+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 3566777777766543 3333 676543
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.77 E-value=3.2e+02 Score=25.31 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=37.0
Q ss_pred CEEEEEeCCCeEEEEeCC-CC-------cceEEee--cCCCCeEEEEEecCCCEEEEecCCCeEEE
Q 040274 80 GVVSLGHSGGTVTMWKPT-TS-------ALLIKML--YHQGPVSALAFHPNGHLMATTGKECKIKI 135 (359)
Q Consensus 80 ~~l~tg~~dg~v~lwd~~-~~-------~~~~~~~--~h~~~v~~l~~~p~g~~l~s~~~d~~i~v 135 (359)
..++.|..+|.|.-.-+. .+ ..+..+. ....+|..+.++++..+|+.++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 357889999976544332 11 1222232 23578899999999999999988886665
No 384
>3v4v_A Integrin alpha-4; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_A*
Probab=20.06 E-value=5.7e+02 Score=24.29 Aligned_cols=87 Identities=17% Similarity=0.180 Sum_probs=47.2
Q ss_pred CCeEEEEeCCCCcceEEeec---------CCCCeEEEEEecCCCE-EEEec----CCCeEEEEEcCCCe--eeEeecC--
Q 040274 88 GGTVTMWKPTTSALLIKMLY---------HQGPVSALAFHPNGHL-MATTG----KECKIKIWDLRKYE--VLQTLTG-- 149 (359)
Q Consensus 88 dg~v~lwd~~~~~~~~~~~~---------h~~~v~~l~~~p~g~~-l~s~~----~d~~i~vwd~~~~~--~~~~~~~-- 149 (359)
.|.|.+|+..+......... -...|....|+.||.. +++|. ..|.|++|....+. ....+.+
T Consensus 189 ~G~v~~~~~~~~~~~~~~~~~~~~~~~sy~GySva~gD~ngDG~~DlvvGAP~~~~~G~V~v~~~~~~~~~~~~~l~G~~ 268 (597)
T 3v4v_A 189 TGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKK 268 (597)
T ss_dssp TBEEEEEETTTTBCCBBCCTTCCSCTTCCBTSSEEEECSSCTTSCEEEEEETTGGGTCEEEEEEECSSSEEEEEEEECSS
T ss_pred ccceEEEEccCceeeecccccccccccCcCccEEEEEEECCCCCeEEEEecccccCCceEEEEecCCCceeEEEEecccc
Confidence 47899998765432211110 0123444456666653 55542 35889999765442 2333322
Q ss_pred -------CceeEEEcCCC---cEEEE-------cCCcEEEEc
Q 040274 150 -------HAKTLDFSQKG---LLAVG-------TGSFAQILG 174 (359)
Q Consensus 150 -------~v~~~~~s~~g---l~~~~-------~d~~i~v~d 174 (359)
.+...+++.|| ++++. ..|.++||-
T Consensus 269 ~g~~fG~sva~~D~ngDG~~DlvVGap~~~~~~~~G~v~vy~ 310 (597)
T 3v4v_A 269 LGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYI 310 (597)
T ss_dssp TTCCTTSEEEEECTTCSSSCEEEEEETTCCSSSCCCEEEEEE
T ss_pred cCCCCcceEEEEeeCCCCCceEEEEcccccCCCcCCeEEEEE
Confidence 13344567777 66554 347888884
Done!